Query psy8199
Match_columns 965
No_of_seqs 631 out of 5414
Neff 9.4
Searched_HMMs 46136
Date Fri Aug 16 21:08:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8199.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8199hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0161 BioA Adenosylmethionin 100.0 9.8E-81 2.1E-85 671.6 40.7 422 221-647 8-443 (449)
2 COG4992 ArgD Ornithine/acetylo 100.0 1.1E-77 2.4E-82 631.4 35.6 363 246-647 34-398 (404)
3 COG0160 GabT 4-aminobutyrate a 100.0 2.4E-74 5.2E-79 627.7 39.8 385 246-646 48-444 (447)
4 PRK06943 adenosylmethionine--8 100.0 1.9E-70 4.1E-75 623.1 43.8 423 223-647 19-446 (453)
5 PRK08742 adenosylmethionine--8 100.0 1.8E-69 3.9E-74 615.4 44.1 422 224-647 29-467 (472)
6 PRK05965 hypothetical protein; 100.0 1.7E-69 3.8E-74 617.2 43.4 400 246-647 38-447 (459)
7 PRK07482 hypothetical protein; 100.0 4.1E-69 8.9E-74 614.4 44.1 422 225-648 15-455 (461)
8 PRK07030 adenosylmethionine--8 100.0 8.6E-69 1.9E-73 610.8 44.1 402 246-648 39-447 (466)
9 PRK07481 hypothetical protein; 100.0 1.6E-68 3.5E-73 608.4 44.4 421 223-646 7-444 (449)
10 KOG1404|consensus 100.0 4.2E-69 9.2E-74 550.0 34.2 386 241-641 32-432 (442)
11 PRK06916 adenosylmethionine--8 100.0 3.6E-68 7.7E-73 606.5 42.5 423 223-647 21-455 (460)
12 PRK07678 aminotransferase; Val 100.0 1.4E-67 3.1E-72 600.9 43.7 397 246-646 39-448 (451)
13 PLN02760 4-aminobutyrate:pyruv 100.0 1.8E-67 3.9E-72 602.9 44.2 422 225-649 56-493 (504)
14 PRK07483 hypothetical protein; 100.0 1.7E-67 3.7E-72 598.0 43.2 399 246-648 22-438 (443)
15 PRK07036 hypothetical protein; 100.0 3.5E-67 7.7E-72 598.4 46.0 422 224-648 17-453 (466)
16 PRK07480 putative aminotransfe 100.0 4.4E-67 9.5E-72 596.0 44.1 399 246-648 42-449 (456)
17 PRK06105 aminotransferase; Pro 100.0 3.7E-66 8.1E-71 590.0 45.2 402 246-649 40-451 (460)
18 PRK06917 hypothetical protein; 100.0 3.4E-66 7.3E-71 588.1 42.6 398 246-647 23-437 (447)
19 PRK07986 adenosylmethionine--8 100.0 3.3E-66 7.1E-71 583.2 41.8 405 224-645 11-421 (428)
20 PRK06062 hypothetical protein; 100.0 4.7E-66 1E-70 587.6 42.0 409 224-650 22-448 (451)
21 PRK06173 adenosylmethionine--8 100.0 6.1E-66 1.3E-70 582.0 42.0 387 246-646 36-424 (429)
22 PRK09221 beta alanine--pyruvat 100.0 1.4E-65 3.1E-70 582.6 43.8 417 226-646 18-442 (445)
23 PRK12403 putative aminotransfe 100.0 1.4E-65 3E-70 585.3 43.5 419 224-648 20-453 (460)
24 PRK13360 omega amino acid--pyr 100.0 1.9E-65 4E-70 581.2 44.2 398 246-645 38-438 (442)
25 PRK06541 hypothetical protein; 100.0 2.6E-65 5.6E-70 582.2 44.6 418 223-646 17-454 (460)
26 TIGR03372 putres_am_tran putre 100.0 3.3E-65 7.1E-70 574.7 39.3 367 246-644 67-441 (442)
27 PRK06938 diaminobutyrate--2-ox 100.0 4.7E-65 1E-69 579.8 40.1 385 246-646 55-459 (464)
28 PRK05630 adenosylmethionine--8 100.0 1.4E-64 3E-69 570.6 41.4 387 246-646 32-419 (422)
29 PRK11522 putrescine--2-oxoglut 100.0 1.9E-64 4.1E-69 573.1 39.2 372 246-649 74-453 (459)
30 KOG1402|consensus 100.0 1.2E-64 2.5E-69 503.7 30.4 369 246-645 51-425 (427)
31 PRK06931 diaminobutyrate--2-ox 100.0 8.9E-64 1.9E-68 569.4 41.0 386 246-647 50-454 (459)
32 PRK05639 4-aminobutyrate amino 100.0 1.7E-63 3.8E-68 565.8 41.0 387 246-647 45-443 (457)
33 PLN02974 adenosylmethionine-8- 100.0 5.9E-63 1.3E-67 584.9 42.3 420 223-644 322-815 (817)
34 PRK05964 adenosylmethionine--8 100.0 1.1E-62 2.3E-67 561.2 40.7 406 225-646 11-421 (423)
35 TIGR00709 dat 2,4-diaminobutyr 100.0 1.5E-62 3.3E-67 559.7 41.2 386 246-647 31-435 (442)
36 PRK06058 4-aminobutyrate amino 100.0 1.5E-62 3.2E-67 560.7 40.2 383 246-645 48-440 (443)
37 PRK06082 4-aminobutyrate amino 100.0 2.5E-62 5.3E-67 557.6 41.0 383 246-647 64-451 (459)
38 PRK08593 4-aminobutyrate amino 100.0 7.5E-62 1.6E-66 553.0 41.7 387 246-647 34-429 (445)
39 PRK05769 4-aminobutyrate amino 100.0 6.3E-61 1.4E-65 544.8 41.3 384 246-646 46-438 (441)
40 PRK07495 4-aminobutyrate amino 100.0 5.4E-61 1.2E-65 542.7 40.4 381 246-647 32-421 (425)
41 PRK08117 4-aminobutyrate amino 100.0 1.9E-60 4.1E-65 544.4 41.6 387 246-646 35-428 (433)
42 KOG1401|consensus 100.0 7.5E-61 1.6E-65 494.4 33.6 369 246-645 48-428 (433)
43 PRK06777 4-aminobutyrate amino 100.0 3.6E-60 7.8E-65 537.5 40.6 379 246-645 32-419 (421)
44 PRK08360 4-aminobutyrate amino 100.0 8.3E-60 1.8E-64 535.2 42.6 387 246-648 33-427 (443)
45 TIGR00700 GABAtrnsam 4-aminobu 100.0 7.7E-60 1.7E-64 536.6 41.3 385 246-645 25-418 (420)
46 TIGR00699 GABAtrns_euk 4-amino 100.0 4.9E-60 1.1E-64 532.3 39.1 376 246-644 50-463 (464)
47 TIGR00508 bioA adenosylmethion 100.0 1.4E-59 2.9E-64 532.4 42.6 386 246-645 37-424 (427)
48 PRK04612 argD acetylornithine 100.0 7.5E-60 1.6E-64 530.5 39.6 369 246-647 32-403 (408)
49 COG0001 HemL Glutamate-1-semia 100.0 1.7E-60 3.7E-65 507.0 32.2 403 211-645 7-426 (432)
50 PRK08297 L-lysine aminotransfe 100.0 1.6E-59 3.6E-64 532.7 39.7 387 246-646 36-440 (443)
51 PRK06918 4-aminobutyrate amino 100.0 3.1E-59 6.7E-64 535.4 41.7 387 246-647 46-443 (451)
52 PRK09792 4-aminobutyrate trans 100.0 2.2E-59 4.8E-64 531.1 39.9 379 246-645 32-419 (421)
53 PRK04013 argD acetylornithine/ 100.0 2.2E-59 4.8E-64 515.5 36.2 343 246-646 16-359 (364)
54 PRK06148 hypothetical protein; 100.0 3.3E-59 7.2E-64 576.2 41.8 382 246-646 616-1009(1013)
55 TIGR02407 ectoine_ectB diamino 100.0 4.8E-59 1E-63 526.8 38.3 370 246-645 27-410 (412)
56 PRK09264 diaminobutyrate--2-ox 100.0 8.6E-59 1.9E-63 527.6 38.8 373 246-647 31-416 (425)
57 TIGR03246 arg_catab_astC succi 100.0 2.2E-58 4.8E-63 521.8 39.6 365 246-645 27-393 (397)
58 PRK03715 argD acetylornithine 100.0 1.6E-58 3.4E-63 519.0 36.6 361 246-646 28-392 (395)
59 PLN00144 acetylornithine trans 100.0 3.8E-58 8.3E-63 514.8 36.0 363 246-646 7-379 (382)
60 PRK12389 glutamate-1-semialdeh 100.0 7.9E-58 1.7E-62 519.5 35.9 363 246-645 45-425 (428)
61 TIGR03251 LAT_fam L-lysine 6-t 100.0 3.2E-57 6.9E-62 514.3 40.0 384 246-643 29-430 (431)
62 PF00202 Aminotran_3: Aminotra 100.0 1E-58 2.3E-63 510.0 25.9 329 246-589 8-338 (339)
63 PLN02482 glutamate-1-semialdeh 100.0 3.2E-57 6.8E-62 513.6 35.8 397 214-645 56-471 (474)
64 PRK12381 bifunctional succinyl 100.0 1.1E-56 2.4E-61 509.4 39.4 366 246-646 31-398 (406)
65 PLN02624 ornithine-delta-amino 100.0 3E-56 6.5E-61 511.2 40.1 371 246-645 67-442 (474)
66 PRK06149 hypothetical protein; 100.0 3.1E-56 6.8E-61 550.7 42.4 383 246-646 577-969 (972)
67 PRK07046 aminotransferase; Val 100.0 2.3E-56 4.9E-61 507.0 36.4 370 241-646 57-449 (453)
68 PRK00615 glutamate-1-semialdeh 100.0 3.9E-56 8.4E-61 501.4 37.6 392 217-647 13-428 (433)
69 PRK04073 rocD ornithine--oxo-a 100.0 1.3E-54 2.8E-59 492.4 38.8 360 246-644 32-394 (396)
70 PRK01278 argD acetylornithine 100.0 1.3E-53 2.9E-58 484.1 38.9 361 246-645 23-386 (389)
71 KOG1403|consensus 100.0 2.6E-54 5.6E-59 423.5 25.3 390 246-653 39-443 (452)
72 PRK05093 argD bifunctional N-s 100.0 1.2E-51 2.7E-56 469.1 38.6 365 246-645 32-398 (403)
73 TIGR01885 Orn_aminotrans ornit 100.0 3.2E-51 6.9E-56 465.8 39.3 368 246-644 29-399 (401)
74 PRK08088 4-aminobutyrate amino 100.0 7.8E-51 1.7E-55 464.0 40.4 379 246-646 33-422 (425)
75 PRK03244 argD acetylornithine 100.0 4.5E-51 9.8E-56 465.2 37.6 357 246-646 35-393 (398)
76 PRK00062 glutamate-1-semialdeh 100.0 2.7E-51 5.8E-56 466.9 35.3 400 216-646 9-423 (426)
77 TIGR00713 hemL glutamate-1-sem 100.0 3.1E-51 6.7E-56 469.3 36.0 365 246-645 40-420 (423)
78 PRK02936 argD acetylornithine 100.0 2.3E-50 5.1E-55 456.2 37.9 354 246-644 21-376 (377)
79 COG0502 BioB Biotin synthase a 100.0 1.9E-50 4E-55 420.3 32.4 309 644-954 12-322 (335)
80 PRK15108 biotin synthase; Prov 100.0 5.1E-50 1.1E-54 436.6 36.4 314 644-957 5-318 (345)
81 PLN02389 biotin synthase 100.0 4.4E-50 9.5E-55 438.3 35.8 311 644-954 45-357 (379)
82 PRK00854 rocD ornithine--oxo-a 100.0 1.1E-49 2.5E-54 454.2 39.6 364 246-645 33-399 (401)
83 PTZ00125 ornithine aminotransf 100.0 8.9E-49 1.9E-53 447.3 39.3 370 246-648 23-396 (400)
84 PRK06209 glutamate-1-semialdeh 100.0 4.3E-49 9.4E-54 447.8 35.8 361 246-648 40-406 (431)
85 PRK04260 acetylornithine amino 100.0 1.1E-47 2.4E-52 433.0 37.0 352 246-644 21-374 (375)
86 cd00610 OAT_like Acetyl ornith 100.0 5.8E-47 1.3E-51 435.2 39.8 380 246-644 28-412 (413)
87 PRK02627 acetylornithine amino 100.0 3.7E-47 8E-52 433.9 37.5 360 246-645 31-392 (396)
88 PRK06256 biotin synthase; Vali 100.0 1.2E-44 2.5E-49 399.9 36.7 320 633-957 6-330 (336)
89 COG0564 RluA Pseudouridylate s 100.0 2.2E-45 4.7E-50 387.0 23.8 229 2-237 52-283 (289)
90 PRK08444 hypothetical protein; 100.0 1.2E-44 2.5E-49 392.6 30.2 305 643-956 10-345 (353)
91 PRK08508 biotin synthase; Prov 100.0 8.6E-44 1.9E-48 378.1 31.5 272 677-952 2-275 (279)
92 KOG1405|consensus 100.0 1.4E-44 3.1E-49 363.0 23.5 379 246-645 68-481 (484)
93 KOG2900|consensus 100.0 8.4E-45 1.8E-49 346.8 18.4 308 647-954 49-360 (380)
94 TIGR00707 argD acetylornithine 100.0 9.2E-42 2E-46 387.2 36.3 359 246-644 19-378 (379)
95 PRK05926 hypothetical protein; 100.0 1.1E-41 2.4E-46 371.8 30.5 318 632-958 13-369 (370)
96 TIGR00433 bioB biotin syntheta 100.0 1.5E-40 3.2E-45 362.0 35.1 292 655-949 2-296 (296)
97 PRK09240 thiH thiamine biosynt 100.0 4.6E-41 1E-45 371.3 30.2 316 628-955 21-363 (371)
98 PRK07360 FO synthase subunit 2 100.0 5.4E-41 1.2E-45 371.3 30.2 321 629-956 2-362 (371)
99 TIGR03700 mena_SCO4494 putativ 100.0 6.1E-41 1.3E-45 369.0 29.3 305 643-956 8-346 (351)
100 PRK08445 hypothetical protein; 100.0 1.1E-40 2.3E-45 363.4 29.5 301 646-956 4-340 (348)
101 TIGR03551 F420_cofH 7,8-dideme 100.0 2.6E-40 5.7E-45 363.8 29.8 302 647-956 2-340 (343)
102 PRK11180 rluD 23S rRNA pseudou 100.0 7.9E-41 1.7E-45 364.1 25.0 227 2-236 59-296 (325)
103 PRK09613 thiH thiamine biosynt 100.0 7.1E-40 1.5E-44 364.5 32.8 326 629-964 28-375 (469)
104 cd02563 PseudoU_synth_TruC tRN 100.0 8.5E-41 1.9E-45 344.2 22.7 208 29-243 1-222 (223)
105 cd02558 PSRA_1 PSRA_1: Pseudou 100.0 1.2E-40 2.5E-45 346.8 23.9 224 2-243 17-244 (246)
106 PRK05927 hypothetical protein; 100.0 2.8E-40 6E-45 358.6 27.0 304 645-956 6-341 (350)
107 TIGR03699 mena_SCO4550 menaqui 100.0 4.9E-40 1.1E-44 362.9 29.5 303 646-956 3-335 (340)
108 PRK11025 23S rRNA pseudouridyl 100.0 1.5E-40 3.3E-45 360.0 24.1 208 27-244 91-303 (317)
109 TIGR00005 rluA_subfam pseudour 100.0 3.9E-40 8.5E-45 357.3 26.0 230 2-237 47-283 (299)
110 PRK10158 23S rRNA/tRNA pseudou 100.0 2.6E-40 5.6E-45 338.3 22.8 199 28-237 13-213 (219)
111 PRK11112 tRNA pseudouridine sy 100.0 1.7E-40 3.8E-45 347.9 22.0 203 29-236 2-218 (257)
112 TIGR02351 thiH thiazole biosyn 100.0 2.2E-39 4.8E-44 357.8 29.3 314 629-954 21-361 (366)
113 PRK07094 biotin synthase; Prov 100.0 6.5E-38 1.4E-42 344.5 34.8 272 647-926 2-280 (323)
114 TIGR01621 RluA-like pseudourid 100.0 4.3E-39 9.4E-44 328.3 21.3 184 29-229 2-186 (217)
115 PRK09234 fbiC FO synthase; Rev 100.0 6E-38 1.3E-42 372.5 32.3 322 628-956 8-372 (843)
116 cd02557 PseudoU_synth_ScRIB2 P 100.0 1.7E-38 3.6E-43 323.9 21.2 186 27-227 14-200 (213)
117 PRK09234 fbiC FO synthase; Rev 100.0 4.2E-37 9.1E-42 365.3 33.0 321 628-956 468-827 (843)
118 TIGR03550 F420_cofG 7,8-dideme 100.0 1.1E-36 2.4E-41 331.2 25.3 272 679-956 2-302 (322)
119 COG1060 ThiH Thiamine biosynth 100.0 3.4E-36 7.3E-41 325.0 28.3 319 634-957 8-359 (370)
120 TIGR00423 radical SAM domain p 100.0 3.3E-36 7.1E-41 326.7 26.4 271 678-956 2-304 (309)
121 PRK06267 hypothetical protein; 100.0 1.7E-35 3.6E-40 324.4 28.2 275 657-944 4-286 (350)
122 cd02869 PseudoU_synth_RluCD_li 100.0 8.8E-34 1.9E-38 286.7 19.5 184 38-226 1-185 (185)
123 PRK07505 hypothetical protein; 100.0 2.3E-32 5E-37 311.1 29.6 337 246-645 38-397 (402)
124 PRK06245 cofG FO synthase subu 100.0 9.6E-32 2.1E-36 296.4 27.4 273 676-956 5-306 (336)
125 PLN02822 serine palmitoyltrans 100.0 2E-30 4.4E-35 298.0 28.5 339 246-646 102-476 (481)
126 PRK13393 5-aminolevulinate syn 100.0 2.3E-29 5E-34 286.9 29.5 330 252-645 43-394 (406)
127 cd02550 PseudoU_synth_Rsu_Rlu_ 100.0 1.4E-30 3.1E-35 252.4 16.0 148 38-200 1-148 (154)
128 TIGR01821 5aminolev_synth 5-am 100.0 3.7E-28 8.1E-33 277.1 30.7 331 251-645 42-394 (402)
129 PRK09064 5-aminolevulinate syn 100.0 3.3E-28 7.2E-33 278.2 29.3 330 252-645 44-395 (407)
130 KOG1919|consensus 100.0 1.3E-28 2.8E-33 262.5 20.2 172 27-207 104-283 (371)
131 cd02556 PseudoU_synth_RluB Pse 100.0 6.3E-29 1.4E-33 243.1 12.2 143 37-201 1-143 (167)
132 cd02870 PseudoU_synth_RsuA_lik 100.0 3.7E-29 8E-34 239.9 8.0 140 38-200 1-140 (146)
133 COG0156 BioF 7-keto-8-aminopel 100.0 1.7E-26 3.6E-31 251.0 29.0 327 251-643 36-386 (388)
134 PLN03227 serine palmitoyltrans 100.0 7.5E-27 1.6E-31 263.0 26.9 336 257-647 1-382 (392)
135 PF00849 PseudoU_synth_2: RNA 99.9 1.6E-27 3.6E-32 235.6 14.0 155 37-193 1-164 (164)
136 PRK05958 8-amino-7-oxononanoat 99.9 2E-25 4.2E-30 254.4 32.5 333 246-644 32-384 (385)
137 PRK10839 16S rRNA pseudouridyl 99.9 2.6E-28 5.5E-33 253.7 7.8 146 34-204 58-203 (232)
138 PLN02955 8-amino-7-oxononanoat 99.9 1.1E-25 2.4E-30 250.1 28.8 334 252-644 100-458 (476)
139 cd02553 PseudoU_synth_RsuA Pse 99.9 8.4E-28 1.8E-32 234.9 10.6 142 38-205 2-144 (167)
140 PRK07179 hypothetical protein; 99.9 1E-25 2.3E-30 257.2 29.2 323 246-645 54-396 (407)
141 cd02566 PseudoU_synth_RluE Pse 99.9 2E-27 4.4E-32 232.8 10.0 155 38-204 1-158 (168)
142 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.3E-24 2.9E-29 247.2 30.4 333 246-645 26-379 (385)
143 COG1856 Uncharacterized homolo 99.9 2.9E-25 6.3E-30 210.2 20.0 235 682-924 11-250 (275)
144 cd02555 PSSA_1 PSSA_1: Pseudou 99.9 2.2E-26 4.8E-31 225.4 10.7 141 36-205 4-154 (177)
145 PRK13392 5-aminolevulinate syn 99.9 2.2E-24 4.9E-29 246.5 28.2 330 251-644 43-394 (410)
146 PRK11394 23S rRNA pseudouridin 99.9 3.3E-26 7.1E-31 228.3 11.0 160 34-205 37-198 (217)
147 TIGR01822 2am3keto_CoA 2-amino 99.9 7.1E-24 1.5E-28 241.8 30.0 335 246-645 30-387 (393)
148 COG1187 RsuA 16S rRNA uridine- 99.9 5.7E-26 1.2E-30 229.1 10.9 181 2-203 29-212 (248)
149 PRK06939 2-amino-3-ketobutyrat 99.9 1E-23 2.2E-28 241.2 30.3 335 246-645 34-391 (397)
150 PRK10700 23S rRNA pseudouridyl 99.9 1.5E-25 3.4E-30 237.3 13.8 143 34-200 65-209 (289)
151 TIGR00858 bioF 8-amino-7-oxono 99.9 2.7E-23 5.9E-28 234.6 31.3 329 246-641 9-359 (360)
152 COG0436 Aspartate/tyrosine/aro 99.9 3.1E-23 6.6E-28 231.8 29.3 336 254-645 28-389 (393)
153 PRK12928 lipoyl synthase; Prov 99.9 3.7E-23 7.9E-28 219.0 22.6 229 649-890 29-268 (290)
154 PRK05937 8-amino-7-oxononanoat 99.9 2.9E-22 6.3E-27 225.5 28.3 318 255-645 5-348 (370)
155 cd02554 PseudoU_synth_RluF Pse 99.9 6.9E-24 1.5E-28 203.8 11.3 135 38-203 2-138 (164)
156 PRK03317 histidinol-phosphate 99.9 2.8E-22 6E-27 226.1 26.2 323 255-645 27-362 (368)
157 PRK10475 23S rRNA pseudouridin 99.9 6.1E-24 1.3E-28 223.8 11.6 137 33-200 64-202 (290)
158 PRK05481 lipoyl synthase; Prov 99.9 3.6E-22 7.9E-27 212.5 24.7 208 646-865 19-235 (289)
159 PTZ00413 lipoate synthase; Pro 99.9 3.8E-22 8.2E-27 209.6 24.3 175 683-865 151-334 (398)
160 PLN02483 serine palmitoyltrans 99.9 2.1E-21 4.5E-26 224.0 30.4 327 251-645 97-464 (489)
161 TIGR00093 pseudouridine syntha 99.9 1.1E-23 2.5E-28 196.2 7.8 109 80-205 1-109 (128)
162 KOG1359|consensus 99.9 2.2E-21 4.7E-26 191.6 22.6 322 254-645 67-410 (417)
163 TIGR00510 lipA lipoate synthas 99.9 1.2E-21 2.6E-26 207.3 22.2 199 683-889 65-272 (302)
164 cd06454 KBL_like KBL_like; thi 99.9 1E-20 2.3E-25 212.4 29.6 325 254-643 1-347 (349)
165 PLN02428 lipoic acid synthase 99.9 5.7E-21 1.2E-25 203.7 24.2 177 681-865 102-286 (349)
166 PRK01533 histidinol-phosphate 99.9 5.6E-21 1.2E-25 213.9 24.0 317 252-644 27-352 (366)
167 COG0079 HisC Histidinol-phosph 99.9 1.8E-20 4E-25 205.4 27.0 318 255-645 23-352 (356)
168 KOG1360|consensus 99.9 6.3E-21 1.4E-25 195.8 21.6 317 268-645 182-522 (570)
169 PRK06225 aspartate aminotransf 99.9 2E-20 4.3E-25 212.0 27.7 333 253-647 27-376 (380)
170 cd00613 GDC-P Glycine cleavage 99.9 3.1E-20 6.8E-25 212.3 27.9 334 261-641 23-398 (398)
171 PRK07682 hypothetical protein; 99.9 3.5E-20 7.5E-25 210.0 27.4 333 255-645 21-374 (378)
172 PRK03158 histidinol-phosphate 99.9 2.1E-20 4.6E-25 210.3 25.2 315 254-643 29-357 (359)
173 PRK08153 histidinol-phosphate 99.9 2.3E-20 4.9E-25 210.0 24.9 323 252-645 29-363 (369)
174 PLN00175 aminotransferase fami 99.9 1.6E-19 3.4E-24 205.8 30.4 335 253-644 53-410 (413)
175 PRK06108 aspartate aminotransf 99.9 1.6E-19 3.5E-24 205.2 30.3 334 255-644 25-379 (382)
176 PRK07324 transaminase; Validat 99.9 9.5E-20 2.1E-24 205.1 26.2 334 248-645 20-368 (373)
177 TIGR03471 HpnJ hopanoid biosyn 99.9 2.1E-20 4.5E-25 216.1 20.8 183 683-873 198-385 (472)
178 TIGR01579 MiaB-like-C MiaB-lik 99.8 4.1E-20 8.9E-25 209.9 22.5 201 683-890 140-355 (414)
179 COG1104 NifS Cysteine sulfinat 99.8 1.8E-20 3.9E-25 199.6 18.1 342 255-650 3-380 (386)
180 TIGR03576 pyridox_MJ0158 pyrid 99.8 1.3E-19 2.9E-24 199.9 25.7 298 268-644 30-344 (346)
181 PRK13355 bifunctional HTH-doma 99.8 2E-19 4.2E-24 210.9 28.5 342 251-645 143-512 (517)
182 PRK02731 histidinol-phosphate 99.8 1.2E-19 2.6E-24 204.8 25.8 323 252-644 30-363 (367)
183 PRK06207 aspartate aminotransf 99.8 5.3E-19 1.2E-23 201.2 30.4 340 254-645 39-400 (405)
184 TIGR01141 hisC histidinol-phos 99.8 1.1E-19 2.4E-24 203.5 24.5 317 254-641 19-345 (346)
185 TIGR02026 BchE magnesium-proto 99.8 4.4E-20 9.6E-25 213.5 20.4 180 684-873 196-385 (497)
186 PRK07681 aspartate aminotransf 99.8 9.4E-19 2E-23 199.4 29.9 333 252-643 30-384 (399)
187 PRK02610 histidinol-phosphate 99.8 5.1E-19 1.1E-23 199.6 26.4 328 254-645 28-369 (374)
188 PRK00950 histidinol-phosphate 99.8 4.2E-19 9.2E-24 200.0 25.7 317 251-644 31-359 (361)
189 PRK09147 succinyldiaminopimela 99.8 1.5E-18 3.2E-23 197.7 30.2 334 252-645 27-394 (396)
190 PLN00145 tyrosine/nicotianamin 99.8 1.4E-18 3E-23 198.7 30.0 342 253-645 51-422 (430)
191 PRK08960 hypothetical protein; 99.8 1.4E-18 3E-23 197.3 29.8 332 253-644 31-384 (387)
192 PRK14809 histidinol-phosphate 99.8 7.4E-19 1.6E-23 197.4 26.9 314 252-644 28-354 (357)
193 PRK09148 aminotransferase; Val 99.8 1.6E-18 3.5E-23 197.4 30.0 346 251-652 27-395 (405)
194 PRK12414 putative aminotransfe 99.8 1.6E-18 3.5E-23 196.2 29.8 333 253-642 28-382 (384)
195 PRK08068 transaminase; Reviewe 99.8 1.7E-18 3.6E-23 196.8 29.7 334 252-643 30-385 (389)
196 PRK14331 (dimethylallyl)adenos 99.8 2E-19 4.3E-24 204.9 21.9 192 682-880 147-352 (437)
197 TIGR00089 RNA modification enz 99.8 1.7E-19 3.6E-24 206.0 21.3 195 683-884 141-350 (429)
198 PRK06358 threonine-phosphate d 99.8 1.8E-18 4E-23 193.4 29.1 319 254-643 19-351 (354)
199 PRK14327 (dimethylallyl)adenos 99.8 2.4E-19 5.2E-24 204.1 21.6 192 681-879 212-418 (509)
200 PRK14332 (dimethylallyl)adenos 99.8 3.6E-19 7.7E-24 201.8 22.7 192 682-880 155-359 (449)
201 TIGR01125 MiaB-like tRNA modif 99.8 3.9E-19 8.5E-24 202.5 23.1 194 683-883 137-345 (430)
202 PRK06348 aspartate aminotransf 99.8 2.8E-18 6E-23 194.5 29.9 333 255-643 30-381 (384)
203 PRK06290 aspartate aminotransf 99.8 1.7E-18 3.7E-23 196.7 28.1 345 252-648 42-406 (410)
204 PTZ00433 tyrosine aminotransfe 99.8 2.6E-18 5.6E-23 196.4 29.6 348 246-645 25-406 (412)
205 TIGR03537 DapC succinyldiamino 99.8 3.8E-18 8.1E-23 191.0 30.3 332 255-643 1-349 (350)
206 PRK14325 (dimethylallyl)adenos 99.8 4.3E-19 9.4E-24 203.0 23.1 197 683-886 149-362 (444)
207 TIGR01212 radical SAM protein, 99.8 4.2E-19 9.1E-24 191.2 21.6 217 671-896 10-254 (302)
208 PRK07309 aromatic amino acid a 99.8 4.8E-18 1E-22 192.9 31.2 337 254-645 30-386 (391)
209 PRK14329 (dimethylallyl)adenos 99.8 5.9E-19 1.3E-23 201.7 23.8 192 682-880 169-381 (467)
210 PRK07366 succinyldiaminopimela 99.8 2.9E-18 6.3E-23 194.9 29.5 336 252-643 28-386 (388)
211 PRK14339 (dimethylallyl)adenos 99.8 4.7E-19 1E-23 200.0 22.4 192 682-880 128-337 (420)
212 PRK14340 (dimethylallyl)adenos 99.8 5.7E-19 1.2E-23 200.2 22.8 191 682-879 150-355 (445)
213 PRK08056 threonine-phosphate d 99.8 3.4E-18 7.3E-23 191.7 28.4 322 251-643 17-351 (356)
214 PRK14335 (dimethylallyl)adenos 99.8 7.8E-19 1.7E-23 200.3 23.3 193 682-881 153-366 (455)
215 PRK14326 (dimethylallyl)adenos 99.8 8.5E-19 1.8E-23 201.3 23.5 186 683-875 159-358 (502)
216 PLN02187 rooty/superroot1 99.8 2.6E-18 5.7E-23 197.6 27.7 350 250-646 62-437 (462)
217 PLN02656 tyrosine transaminase 99.8 7.3E-18 1.6E-22 192.3 30.8 345 251-645 28-401 (409)
218 PLN00143 tyrosine/nicotianamin 99.8 5.8E-18 1.2E-22 193.0 29.8 348 248-645 26-402 (409)
219 PRK08363 alanine aminotransfer 99.8 5.4E-18 1.2E-22 193.2 29.6 345 252-645 28-392 (398)
220 PRK09105 putative aminotransfe 99.8 2.5E-18 5.4E-23 193.0 26.3 316 254-643 43-366 (370)
221 PRK05904 coproporphyrinogen II 99.8 5.3E-19 1.2E-23 194.2 20.2 212 675-894 3-224 (353)
222 PRK05764 aspartate aminotransf 99.8 5.1E-18 1.1E-22 193.5 29.0 341 253-645 30-389 (393)
223 PRK08912 hypothetical protein; 99.8 5.5E-18 1.2E-22 192.6 28.8 335 254-644 26-383 (387)
224 PLN03026 histidinol-phosphate 99.8 2.8E-18 6.1E-23 193.6 26.1 318 252-642 50-377 (380)
225 KOG0257|consensus 99.8 6.8E-19 1.5E-23 185.0 19.4 275 272-588 46-342 (420)
226 PRK15481 transcriptional regul 99.8 3.5E-18 7.6E-23 196.7 27.1 328 254-645 85-429 (431)
227 PRK14328 (dimethylallyl)adenos 99.8 7.5E-19 1.6E-23 200.3 21.2 191 683-880 149-354 (439)
228 TIGR01574 miaB-methiolase tRNA 99.8 8.9E-19 1.9E-23 199.6 21.8 193 682-881 146-355 (438)
229 TIGR03540 DapC_direct LL-diami 99.8 8.1E-18 1.7E-22 191.0 29.5 333 252-642 27-381 (383)
230 PRK06107 aspartate aminotransf 99.8 7.4E-18 1.6E-22 192.1 29.1 341 252-645 31-398 (402)
231 PRK09276 LL-diaminopimelate am 99.8 7.6E-18 1.7E-22 191.3 29.2 334 252-642 29-383 (385)
232 cd00609 AAT_like Aspartate ami 99.8 3.9E-18 8.4E-23 191.7 26.4 323 265-642 7-349 (350)
233 TIGR01578 MiaB-like-B MiaB-lik 99.8 1.4E-18 3.1E-23 196.5 22.9 192 682-880 134-339 (420)
234 PRK08636 aspartate aminotransf 99.8 1E-17 2.2E-22 191.0 30.1 344 252-645 31-398 (403)
235 PRK14336 (dimethylallyl)adenos 99.8 1.4E-18 3E-23 196.0 22.5 191 682-879 125-331 (418)
236 PRK05942 aspartate aminotransf 99.8 8.7E-18 1.9E-22 191.1 29.3 335 252-643 33-388 (394)
237 PRK14807 histidinol-phosphate 99.8 6.7E-18 1.4E-22 188.9 27.8 315 256-643 24-348 (351)
238 cd06502 TA_like Low-specificit 99.8 3.4E-18 7.4E-23 191.1 25.3 321 258-643 1-337 (338)
239 PLN02721 threonine aldolase 99.8 8.6E-18 1.9E-22 189.0 28.7 332 255-645 6-350 (353)
240 PRK07550 hypothetical protein; 99.8 1.1E-17 2.3E-22 190.2 29.5 337 252-643 27-383 (386)
241 PRK09082 methionine aminotrans 99.8 7.2E-18 1.6E-22 191.3 28.1 331 254-642 30-384 (386)
242 PRK07777 aminotransferase; Val 99.8 8.3E-18 1.8E-22 191.1 28.5 334 254-643 24-382 (387)
243 PTZ00377 alanine aminotransfer 99.8 1.4E-17 3E-22 193.8 30.6 329 272-646 90-474 (481)
244 PRK05839 hypothetical protein; 99.8 1.4E-17 3E-22 187.8 29.6 331 251-645 21-372 (374)
245 PRK14862 rimO ribosomal protei 99.8 2.4E-18 5.3E-23 195.4 23.4 198 683-888 141-361 (440)
246 PRK08361 aspartate aminotransf 99.8 8E-18 1.7E-22 191.3 27.7 335 254-645 33-388 (391)
247 PRK14330 (dimethylallyl)adenos 99.8 2E-18 4.3E-23 196.8 22.7 184 683-873 142-339 (434)
248 PRK14338 (dimethylallyl)adenos 99.8 2.7E-18 5.8E-23 196.1 23.6 186 683-875 157-356 (459)
249 PRK08207 coproporphyrinogen II 99.8 3.8E-18 8.3E-23 194.0 24.5 201 690-894 171-393 (488)
250 PRK07683 aminotransferase A; V 99.8 1.8E-17 3.9E-22 187.9 30.0 335 254-645 28-381 (387)
251 KOG0259|consensus 99.8 2.5E-17 5.5E-22 169.6 27.7 338 255-646 62-432 (447)
252 PRK07392 threonine-phosphate d 99.8 9.6E-18 2.1E-22 188.4 27.0 303 255-624 23-339 (360)
253 PRK05664 threonine-phosphate d 99.8 1E-17 2.2E-22 185.5 26.5 299 254-644 20-325 (330)
254 TIGR03538 DapC_gpp succinyldia 99.8 2E-17 4.4E-22 188.2 29.6 335 249-643 23-391 (393)
255 PRK14337 (dimethylallyl)adenos 99.8 3.4E-18 7.3E-23 194.9 23.0 192 682-880 149-356 (446)
256 PRK14333 (dimethylallyl)adenos 99.8 1.7E-18 3.7E-23 197.6 20.6 192 683-881 150-363 (448)
257 PRK14808 histidinol-phosphate 99.8 1.2E-17 2.5E-22 185.1 26.2 313 248-643 13-333 (335)
258 PRK08175 aminotransferase; Val 99.8 2.6E-17 5.7E-22 187.3 29.7 339 253-645 28-387 (395)
259 PRK03321 putative aminotransfe 99.8 3.5E-18 7.6E-23 191.7 22.2 315 255-644 23-348 (352)
260 TIGR01264 tyr_amTase_E tyrosin 99.8 1.7E-17 3.6E-22 189.5 28.1 341 253-645 30-397 (401)
261 PRK14334 (dimethylallyl)adenos 99.8 4.2E-18 9.1E-23 194.0 23.0 194 682-882 139-346 (440)
262 TIGR03402 FeS_nifS cysteine de 99.8 1.4E-17 3.1E-22 188.8 27.4 333 256-647 2-372 (379)
263 COG1168 MalY Bifunctional PLP- 99.8 4.3E-17 9.3E-22 169.9 27.8 324 271-645 39-384 (388)
264 PRK05387 histidinol-phosphate 99.8 9.1E-18 2E-22 188.6 24.9 316 253-644 23-350 (353)
265 PRK07568 aspartate aminotransf 99.8 3E-17 6.4E-22 187.5 29.5 334 253-645 29-390 (397)
266 PRK13520 L-tyrosine decarboxyl 99.8 2.3E-17 5.1E-22 186.8 28.3 320 270-644 31-368 (371)
267 PRK07337 aminotransferase; Val 99.8 2.5E-17 5.5E-22 187.2 28.5 336 253-643 29-385 (388)
268 PF00155 Aminotran_1_2: Aminot 99.8 1.7E-17 3.7E-22 187.3 26.8 333 255-641 2-363 (363)
269 TIGR03539 DapC_actino succinyl 99.8 1.9E-17 4.2E-22 185.7 26.8 321 251-641 18-356 (357)
270 PRK09265 aminotransferase AlaT 99.8 3.6E-17 7.8E-22 186.8 29.3 343 251-645 30-399 (404)
271 smart00729 Elp3 Elongator prot 99.8 2.2E-18 4.8E-23 179.1 17.7 185 684-875 4-201 (216)
272 PRK06425 histidinol-phosphate 99.8 1.4E-17 3E-22 184.7 24.8 281 293-643 36-329 (332)
273 PRK01688 histidinol-phosphate 99.8 3.5E-18 7.5E-23 190.9 20.1 284 293-641 53-350 (351)
274 TIGR01140 L_thr_O3P_dcar L-thr 99.8 2.4E-17 5.3E-22 182.6 26.0 270 298-641 48-329 (330)
275 PRK05957 aspartate aminotransf 99.8 5.9E-17 1.3E-21 183.9 29.6 333 255-645 28-383 (389)
276 PRK06855 aminotransferase; Val 99.8 5.4E-17 1.2E-21 186.2 29.6 345 253-645 31-427 (433)
277 PRK04870 histidinol-phosphate 99.8 1.8E-17 3.9E-22 186.2 25.2 318 253-643 25-354 (356)
278 PRK05166 histidinol-phosphate 99.8 1.8E-17 3.9E-22 186.9 25.3 320 253-643 35-367 (371)
279 PRK06959 putative threonine-ph 99.8 1.5E-17 3.2E-22 184.5 24.0 300 254-645 24-331 (339)
280 PLN02672 methionine S-methyltr 99.8 3.1E-17 6.7E-22 198.2 28.3 346 246-643 689-1076(1082)
281 PRK07379 coproporphyrinogen II 99.8 8.2E-18 1.8E-22 188.9 21.7 205 687-895 15-242 (400)
282 PRK10874 cysteine sulfinate de 99.8 7.3E-17 1.6E-21 184.3 29.9 336 253-645 19-396 (401)
283 PTZ00376 aspartate aminotransf 99.8 2E-17 4.4E-22 188.5 25.2 339 253-644 28-400 (404)
284 TIGR03392 FeS_syn_CsdA cystein 99.8 7.2E-17 1.6E-21 184.2 29.6 335 253-645 16-393 (398)
285 PLN02231 alanine transaminase 99.8 5.1E-17 1.1E-21 188.7 28.6 329 272-646 142-526 (534)
286 PRK07865 N-succinyldiaminopime 99.8 6.1E-17 1.3E-21 182.4 27.9 321 250-642 23-363 (364)
287 PRK08599 coproporphyrinogen II 99.8 7.3E-18 1.6E-22 189.3 20.3 199 690-894 9-226 (377)
288 PRK08354 putative aminotransfe 99.8 8.1E-17 1.8E-21 176.8 28.1 295 251-643 5-308 (311)
289 PRK09295 bifunctional cysteine 99.8 1E-16 2.2E-21 183.3 30.1 336 253-644 23-401 (406)
290 PRK05799 coproporphyrinogen II 99.8 6E-18 1.3E-22 189.9 19.1 200 689-894 10-225 (374)
291 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 6.8E-17 1.5E-21 182.0 27.4 318 272-644 11-354 (355)
292 PRK09257 aromatic amino acid a 99.8 6.9E-17 1.5E-21 183.9 27.6 337 255-644 27-395 (396)
293 PRK05660 HemN family oxidoredu 99.8 2E-17 4.3E-22 184.6 22.5 198 689-895 13-230 (378)
294 PRK09058 coproporphyrinogen II 99.8 2.2E-17 4.8E-22 188.1 22.7 200 690-895 69-291 (449)
295 TIGR00539 hemN_rel putative ox 99.8 8.6E-18 1.9E-22 187.1 18.1 201 689-895 7-223 (360)
296 TIGR01265 tyr_nico_aTase tyros 99.8 2.1E-16 4.5E-21 180.3 29.7 344 252-645 29-399 (403)
297 TIGR01976 am_tr_V_VC1184 cyste 99.8 2.6E-16 5.6E-21 179.9 29.3 328 254-641 18-397 (397)
298 PRK09057 coproporphyrinogen II 99.8 2.9E-17 6.3E-22 183.6 20.7 202 689-896 11-231 (380)
299 PLN02368 alanine transaminase 99.8 4.8E-17 1E-21 183.4 22.6 256 288-587 102-393 (407)
300 cd06453 SufS_like Cysteine des 99.8 2.9E-16 6.2E-21 178.0 29.1 328 256-641 2-373 (373)
301 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 9.2E-17 2E-21 180.8 24.5 297 296-645 50-366 (370)
302 TIGR01210 conserved hypothetic 99.8 6.6E-17 1.4E-21 174.7 22.1 206 676-891 10-244 (313)
303 PRK08446 coproporphyrinogen II 99.8 1.9E-17 4.2E-22 182.9 18.3 180 689-874 7-198 (350)
304 PLN02450 1-aminocyclopropane-1 99.8 1.3E-16 2.8E-21 183.9 25.9 308 289-645 82-428 (468)
305 PRK10534 L-threonine aldolase; 99.8 1.1E-16 2.5E-21 178.0 24.5 321 256-643 1-329 (333)
306 PRK05628 coproporphyrinogen II 99.8 3.3E-17 7.2E-22 183.6 20.2 202 689-894 9-234 (375)
307 PRK07590 L,L-diaminopimelate a 99.8 3.8E-16 8.2E-21 178.5 29.3 343 253-643 33-407 (409)
308 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 3.5E-16 7.5E-21 177.2 28.1 329 266-645 27-379 (387)
309 PRK03967 histidinol-phosphate 99.7 1.4E-16 3E-21 176.9 24.3 306 252-643 16-330 (337)
310 PRK08898 coproporphyrinogen II 99.7 6E-17 1.3E-21 181.8 21.4 201 689-893 26-242 (394)
311 PRK06294 coproporphyrinogen II 99.7 2.6E-17 5.7E-22 183.1 18.2 197 690-894 14-229 (370)
312 PRK06836 aspartate aminotransf 99.7 8.8E-16 1.9E-20 174.6 30.8 333 253-645 32-389 (394)
313 PRK04781 histidinol-phosphate 99.7 1.4E-16 3E-21 178.9 23.7 284 299-643 61-359 (364)
314 PRK06582 coproporphyrinogen II 99.7 3.8E-17 8.3E-22 182.1 18.9 201 689-895 18-237 (390)
315 PLN02607 1-aminocyclopropane-1 99.7 4.4E-16 9.6E-21 178.0 27.9 304 292-647 94-437 (447)
316 PRK08208 coproporphyrinogen II 99.7 9.4E-17 2E-21 182.4 22.2 210 676-894 37-261 (430)
317 PLN02376 1-aminocyclopropane-1 99.7 5.3E-16 1.1E-20 179.4 28.7 303 292-646 93-437 (496)
318 PRK13238 tnaA tryptophanase/L- 99.7 1.2E-15 2.6E-20 174.2 29.9 333 274-645 58-431 (460)
319 PRK04635 histidinol-phosphate 99.7 1.4E-16 2.9E-21 178.6 21.7 283 294-643 57-351 (354)
320 COG0621 MiaB 2-methylthioadeni 99.7 6.8E-17 1.5E-21 177.1 18.4 191 682-879 145-351 (437)
321 COG1242 Predicted Fe-S oxidore 99.7 4.4E-16 9.6E-21 154.2 21.7 220 668-896 13-259 (312)
322 TIGR01211 ELP3 histone acetylt 99.7 9.1E-16 2E-20 174.2 26.6 213 679-896 66-336 (522)
323 TIGR03542 DAPAT_plant LL-diami 99.7 1.6E-15 3.5E-20 172.9 28.4 338 252-644 31-401 (402)
324 TIGR01979 sufS cysteine desulf 99.7 2.6E-15 5.7E-20 171.9 30.1 335 254-644 19-398 (403)
325 cd06451 AGAT_like Alanine-glyo 99.7 1.1E-15 2.4E-20 172.0 26.4 319 271-644 10-354 (356)
326 COG0520 csdA Selenocysteine ly 99.7 1.3E-15 2.9E-20 169.9 26.6 335 254-644 23-402 (405)
327 TIGR03812 tyr_de_CO2_Arch tyro 99.7 3.3E-15 7.2E-20 169.3 30.2 321 271-643 32-372 (373)
328 PRK09440 avtA valine--pyruvate 99.7 2.2E-15 4.8E-20 172.9 28.1 345 255-645 31-409 (416)
329 TIGR00538 hemN oxygen-independ 99.7 8.2E-16 1.8E-20 176.5 24.3 201 689-894 56-276 (455)
330 PLN02855 Bifunctional selenocy 99.7 2.1E-15 4.6E-20 173.3 27.8 339 253-647 32-418 (424)
331 COG0320 LipA Lipoate synthase 99.7 7.3E-16 1.6E-20 152.3 19.8 194 689-890 77-277 (306)
332 PLN02397 aspartate transaminas 99.7 2.4E-15 5.2E-20 171.9 26.9 340 254-645 48-419 (423)
333 TIGR03403 nifS_epsilon cystein 99.7 3.9E-15 8.5E-20 169.0 28.5 334 256-646 2-374 (382)
334 TIGR02326 transamin_PhnW 2-ami 99.7 3.1E-15 6.8E-20 168.6 27.3 299 296-644 34-359 (363)
335 PRK02948 cysteine desulfurase; 99.7 1.7E-15 3.6E-20 172.0 25.1 330 255-644 2-371 (381)
336 TIGR01814 kynureninase kynuren 99.7 3.9E-15 8.4E-20 170.0 28.1 339 252-644 26-404 (406)
337 TIGR02006 IscS cysteine desulf 99.7 2.5E-15 5.4E-20 171.4 26.0 328 254-646 4-376 (402)
338 PRK09275 aspartate aminotransf 99.7 1.9E-15 4E-20 172.9 24.2 334 269-647 111-517 (527)
339 PRK13347 coproporphyrinogen II 99.7 9.3E-16 2E-20 175.5 21.7 200 690-894 58-277 (453)
340 PRK07908 hypothetical protein; 99.7 4E-15 8.7E-20 166.5 26.5 308 253-643 21-343 (349)
341 TIGR01977 am_tr_V_EF2568 cyste 99.7 6.8E-15 1.5E-19 166.9 28.3 330 256-643 2-375 (376)
342 COG2008 GLY1 Threonine aldolas 99.7 3.1E-15 6.8E-20 156.2 22.7 333 257-643 2-339 (342)
343 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 5.1E-15 1.1E-19 166.5 26.3 325 268-643 10-358 (361)
344 KOG1368|consensus 99.7 2.8E-15 6.1E-20 149.3 20.4 324 255-642 22-363 (384)
345 PRK09249 coproporphyrinogen II 99.7 1.6E-15 3.4E-20 173.8 21.5 200 690-894 57-276 (453)
346 PLN02951 Molybderin biosynthes 99.7 2.4E-15 5.3E-20 166.5 22.1 203 676-888 54-261 (373)
347 TIGR01437 selA_rel uncharacter 99.7 2.1E-14 4.4E-19 160.6 29.4 323 254-644 8-362 (363)
348 PRK13034 serine hydroxymethylt 99.7 1.2E-14 2.7E-19 165.1 28.0 329 255-646 29-391 (416)
349 PF00266 Aminotran_5: Aminotra 99.7 7.7E-15 1.7E-19 165.8 24.8 323 256-637 2-371 (371)
350 cd01335 Radical_SAM Radical SA 99.7 4.4E-15 9.6E-20 152.5 20.7 191 689-886 4-202 (204)
351 TIGR03801 asp_4_decarbox aspar 99.7 5.3E-15 1.1E-19 168.9 22.7 339 268-645 104-514 (521)
352 COG1167 ARO8 Transcriptional r 99.7 3.1E-14 6.7E-19 163.3 29.1 338 251-646 86-454 (459)
353 PRK08637 hypothetical protein; 99.7 1.6E-14 3.5E-19 163.9 26.5 309 290-645 41-384 (388)
354 PRK13361 molybdenum cofactor b 99.7 6.3E-15 1.4E-19 161.8 21.8 202 676-888 10-217 (329)
355 TIGR02666 moaA molybdenum cofa 99.7 7.7E-15 1.7E-19 162.3 22.7 204 676-888 6-216 (334)
356 PLN02409 serine--glyoxylate am 99.6 2.2E-14 4.8E-19 163.0 24.9 301 296-646 41-371 (401)
357 cd00616 AHBA_syn 3-amino-5-hyd 99.6 5.6E-14 1.2E-18 158.0 27.5 305 277-642 3-352 (352)
358 COG2896 MoaA Molybdenum cofact 99.6 1.4E-14 3.1E-19 151.7 20.7 204 676-888 7-214 (322)
359 PRK13479 2-aminoethylphosphona 99.6 4.7E-14 1E-18 159.4 26.8 298 297-645 37-361 (368)
360 cd00378 SHMT Serine-glycine hy 99.6 6.2E-14 1.3E-18 160.5 27.2 331 254-647 19-385 (402)
361 PRK08629 coproporphyrinogen II 99.6 1.8E-14 4E-19 162.5 21.5 198 689-894 59-270 (433)
362 TIGR01325 O_suc_HS_sulf O-succ 99.6 2.8E-14 6E-19 160.6 22.8 241 291-589 48-306 (380)
363 PRK00164 moaA molybdenum cofac 99.6 3E-14 6.5E-19 157.5 22.5 203 676-888 13-221 (331)
364 PRK00011 glyA serine hydroxyme 99.6 2.2E-13 4.7E-18 156.5 30.3 331 254-647 25-389 (416)
365 PLN02651 cysteine desulfurase 99.6 2.8E-14 6.1E-19 160.6 22.1 320 256-635 2-364 (364)
366 COG1243 ELP3 Histone acetyltra 99.6 3.8E-14 8.3E-19 150.3 20.8 219 679-901 65-332 (515)
367 COG0635 HemN Coproporphyrinoge 99.6 2.4E-14 5.2E-19 160.0 20.0 201 689-894 41-262 (416)
368 PF04055 Radical_SAM: Radical 99.6 8.6E-15 1.9E-19 145.1 14.5 160 685-848 1-166 (166)
369 KOG0633|consensus 99.6 4.9E-14 1.1E-18 137.7 18.8 287 300-643 72-373 (375)
370 cd00614 CGS_like CGS_like: Cys 99.6 5.3E-14 1.2E-18 158.0 22.2 240 292-589 35-293 (369)
371 cd06450 DOPA_deC_like DOPA dec 99.6 1.5E-13 3.2E-18 154.0 25.8 309 275-643 15-344 (345)
372 TIGR02668 moaA_archaeal probab 99.6 5.3E-14 1.1E-18 153.5 21.2 200 676-887 6-210 (302)
373 PRK14012 cysteine desulfurase; 99.6 2.5E-13 5.5E-18 155.1 26.5 332 254-647 4-379 (404)
374 cd00617 Tnase_like Tryptophana 99.6 2.9E-13 6.4E-18 152.2 26.0 350 251-648 17-409 (431)
375 PRK00955 hypothetical protein; 99.6 7.2E-14 1.6E-18 159.4 21.1 185 681-872 292-525 (620)
376 PRK01254 hypothetical protein; 99.6 5.9E-14 1.3E-18 158.1 19.7 185 683-873 374-608 (707)
377 COG1032 Fe-S oxidoreductase [E 99.6 2E-14 4.3E-19 169.5 16.7 196 682-885 199-415 (490)
378 PLN02242 methionine gamma-lyas 99.6 1.1E-13 2.4E-18 156.6 21.5 257 291-608 70-347 (418)
379 PF06968 BATS: Biotin and Thia 99.6 5E-15 1.1E-19 128.6 7.2 93 859-951 1-93 (93)
380 KOG1358|consensus 99.6 7E-14 1.5E-18 144.8 16.3 335 249-644 89-462 (467)
381 PRK07049 methionine gamma-lyas 99.6 2.9E-13 6.4E-18 153.8 23.0 244 292-589 78-349 (427)
382 PRK06767 methionine gamma-lyas 99.6 2.2E-13 4.7E-18 153.7 21.0 263 291-618 55-332 (386)
383 smart00876 BATS Biotin and Thi 99.5 1.8E-14 3.9E-19 125.6 9.1 93 859-951 1-94 (94)
384 PRK08133 O-succinylhomoserine 99.5 3.9E-13 8.5E-18 151.5 22.5 240 292-589 56-313 (390)
385 PRK13580 serine hydroxymethylt 99.5 3E-12 6.5E-17 143.4 28.3 215 406-647 207-445 (493)
386 PRK08247 cystathionine gamma-s 99.5 7E-13 1.5E-17 148.6 23.6 237 291-589 46-288 (366)
387 TIGR01290 nifB nitrogenase cof 99.5 8.1E-13 1.7E-17 149.0 24.0 209 683-896 26-262 (442)
388 TIGR02493 PFLA pyruvate format 99.5 1.1E-12 2.3E-17 137.9 22.7 195 689-891 22-234 (235)
389 PRK08249 cystathionine gamma-s 99.5 6.1E-13 1.3E-17 149.9 22.0 241 291-589 58-316 (398)
390 COG3977 Alanine-alpha-ketoisov 99.5 3.2E-12 7E-17 127.7 23.7 343 258-644 25-408 (417)
391 TIGR03235 DNA_S_dndA cysteine 99.5 1.2E-12 2.6E-17 146.9 23.8 301 256-617 1-321 (353)
392 PRK05301 pyrroloquinoline quin 99.5 1.3E-12 2.9E-17 147.2 23.9 175 681-866 16-194 (378)
393 PRK06234 methionine gamma-lyas 99.5 9.7E-13 2.1E-17 148.9 22.1 261 291-612 58-338 (400)
394 KOG0256|consensus 99.5 5.3E-12 1.2E-16 132.0 25.2 286 313-646 145-460 (471)
395 KOG1549|consensus 99.5 8.8E-13 1.9E-17 141.5 19.6 341 254-645 44-416 (428)
396 PRK00451 glycine dehydrogenase 99.5 2.7E-12 5.9E-17 148.8 25.4 286 300-643 115-444 (447)
397 PRK11658 UDP-4-amino-4-deoxy-L 99.5 8.8E-12 1.9E-16 140.5 27.2 283 273-615 14-321 (379)
398 TIGR03470 HpnH hopanoid biosyn 99.5 4.7E-12 1E-16 137.9 23.4 210 666-888 12-224 (318)
399 PRK08045 cystathionine gamma-s 99.5 3.6E-12 7.9E-17 143.0 23.2 241 291-589 46-305 (386)
400 PTZ00094 serine hydroxymethylt 99.5 1.4E-11 3.1E-16 142.0 28.5 344 254-647 34-408 (452)
401 PRK04366 glycine dehydrogenase 99.5 1.3E-11 2.7E-16 143.0 27.9 334 270-647 81-448 (481)
402 TIGR02379 ECA_wecE TDP-4-keto- 99.5 1.7E-11 3.7E-16 137.4 27.9 282 273-615 11-318 (376)
403 PRK08861 cystathionine gamma-s 99.5 2E-12 4.4E-17 144.4 20.4 241 291-589 47-306 (388)
404 PRK06460 hypothetical protein; 99.5 4.8E-12 1E-16 142.0 23.4 240 292-589 40-297 (376)
405 PRK07810 O-succinylhomoserine 99.5 4E-12 8.7E-17 143.5 22.8 240 292-589 65-323 (403)
406 TIGR03822 AblA_like_2 lysine-2 99.5 3.2E-12 6.9E-17 139.0 21.0 195 683-896 90-297 (321)
407 PRK07504 O-succinylhomoserine 99.5 2.9E-12 6.2E-17 144.8 21.2 240 292-589 60-318 (398)
408 COG2100 Predicted Fe-S oxidore 99.5 2.7E-12 5.9E-17 129.5 18.2 197 689-890 114-325 (414)
409 TIGR01328 met_gam_lyase methio 99.5 4.1E-12 8.9E-17 143.1 22.0 243 291-589 53-313 (391)
410 KOG1357|consensus 99.5 1.5E-12 3.3E-17 137.6 17.0 309 272-643 153-498 (519)
411 TIGR02080 O_succ_thio_ly O-suc 99.5 4.6E-12 9.9E-17 142.2 22.2 240 292-589 46-304 (382)
412 PRK07582 cystathionine gamma-l 99.5 6.4E-12 1.4E-16 140.5 23.2 279 292-642 46-364 (366)
413 TIGR01788 Glu-decarb-GAD gluta 99.5 2.9E-11 6.2E-16 136.7 28.3 338 271-646 53-428 (431)
414 TIGR02109 PQQ_syn_pqqE coenzym 99.5 6.8E-12 1.5E-16 140.5 23.0 174 681-865 7-184 (358)
415 PRK08776 cystathionine gamma-s 99.4 7.2E-12 1.6E-16 141.4 22.4 241 291-589 54-313 (405)
416 PRK07269 cystathionine gamma-s 99.4 8.7E-12 1.9E-16 138.8 22.6 235 291-589 48-288 (364)
417 COG2516 Biotin synthase-relate 99.4 1.9E-12 4.1E-17 131.7 15.4 250 689-953 38-311 (339)
418 PRK07503 methionine gamma-lyas 99.4 5.6E-12 1.2E-16 142.7 20.9 242 292-589 60-319 (403)
419 PRK06084 O-acetylhomoserine am 99.4 7.5E-12 1.6E-16 142.0 21.8 247 291-589 52-345 (425)
420 TIGR01326 OAH_OAS_sulfhy OAH/O 99.4 7.9E-12 1.7E-16 142.3 21.9 166 292-507 52-219 (418)
421 PRK05968 hypothetical protein; 99.4 7.1E-12 1.5E-16 141.3 21.3 260 292-618 58-333 (389)
422 PRK07811 cystathionine gamma-s 99.4 1.3E-11 2.7E-16 139.2 23.3 240 292-589 56-314 (388)
423 PRK11145 pflA pyruvate formate 99.4 1.5E-11 3.3E-16 129.9 22.4 196 689-892 27-240 (246)
424 TIGR01324 cysta_beta_ly_B cyst 99.4 1E-11 2.2E-16 138.8 22.0 265 292-618 45-327 (377)
425 PRK08574 cystathionine gamma-s 99.4 1.4E-11 3E-16 138.5 22.3 239 292-589 48-307 (385)
426 PLN03226 serine hydroxymethylt 99.4 5.5E-11 1.2E-15 136.3 27.5 335 255-646 35-418 (475)
427 PRK12566 glycine dehydrogenase 99.4 4.6E-11 9.9E-16 142.0 27.2 314 294-651 540-880 (954)
428 PRK07050 cystathionine beta-ly 99.4 1.8E-11 4E-16 137.9 22.8 263 291-614 59-340 (394)
429 PRK05994 O-acetylhomoserine am 99.4 2.1E-11 4.6E-16 138.8 23.5 245 292-589 58-349 (427)
430 KOG2672|consensus 99.4 3.3E-12 7.2E-17 125.8 14.1 194 679-880 109-310 (360)
431 PRK13762 tRNA-modifying enzyme 99.4 2.4E-11 5.1E-16 131.7 21.4 214 674-894 50-292 (322)
432 PLN02414 glycine dehydrogenase 99.4 9.8E-11 2.1E-15 142.3 28.4 312 296-650 567-910 (993)
433 PRK02769 histidine decarboxyla 99.4 1.6E-10 3.4E-15 129.0 27.8 290 295-644 63-369 (380)
434 PLN03032 serine decarboxylase; 99.4 1.6E-10 3.6E-15 127.7 27.6 313 272-643 36-372 (374)
435 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.4 1.4E-10 3E-15 130.8 27.8 280 273-615 11-317 (375)
436 PRK09028 cystathionine beta-ly 99.4 2.2E-11 4.7E-16 136.0 20.6 239 293-589 57-313 (394)
437 TIGR01329 cysta_beta_ly_E cyst 99.4 4E-11 8.6E-16 134.7 22.1 261 293-618 43-322 (378)
438 PRK08064 cystathionine beta-ly 99.4 7.2E-11 1.6E-15 133.2 23.9 239 292-589 49-306 (390)
439 COG1031 Uncharacterized Fe-S o 99.4 2.6E-11 5.6E-16 128.2 18.5 204 664-874 167-414 (560)
440 TIGR03588 PseC UDP-4-keto-6-de 99.4 3.1E-10 6.8E-15 128.5 28.8 285 273-615 10-324 (380)
441 PRK05967 cystathionine beta-ly 99.4 4.9E-11 1.1E-15 132.8 21.6 241 291-589 58-316 (395)
442 PLN02509 cystathionine beta-ly 99.3 1E-10 2.2E-15 132.9 23.3 237 294-589 130-385 (464)
443 PRK05367 glycine dehydrogenase 99.3 4E-10 8.7E-15 137.9 29.4 313 297-650 542-878 (954)
444 PRK15407 lipopolysaccharide bi 99.3 5.6E-10 1.2E-14 127.3 27.3 270 297-615 63-375 (438)
445 TIGR02495 NrdG2 anaerobic ribo 99.3 1.4E-10 3E-15 117.6 19.8 157 689-852 23-183 (191)
446 PRK08248 O-acetylhomoserine am 99.3 1.5E-10 3.3E-15 131.6 21.9 246 292-589 59-350 (431)
447 PRK03080 phosphoserine aminotr 99.3 1.3E-10 2.8E-15 131.0 21.3 315 272-646 24-372 (378)
448 PRK06702 O-acetylhomoserine am 99.3 3.1E-10 6.8E-15 127.8 24.1 243 294-589 58-347 (432)
449 PRK04311 selenocysteine syntha 99.3 2.1E-09 4.6E-14 122.2 30.5 332 247-644 80-461 (464)
450 PRK06176 cystathionine gamma-s 99.3 2E-10 4.4E-15 128.8 21.9 240 291-589 44-302 (380)
451 COG0075 Serine-pyruvate aminot 99.3 1.2E-09 2.6E-14 118.4 26.7 320 272-646 17-362 (383)
452 PRK14460 ribosomal RNA large s 99.3 3.6E-10 7.9E-15 123.6 22.2 188 689-891 109-319 (354)
453 PRK14456 ribosomal RNA large s 99.3 4.8E-10 1E-14 122.8 23.0 189 689-891 128-340 (368)
454 PRK07671 cystathionine beta-ly 99.3 2.7E-10 5.9E-15 127.8 21.7 240 291-589 44-302 (377)
455 TIGR00461 gcvP glycine dehydro 99.3 2.6E-09 5.7E-14 128.2 30.7 312 297-650 530-870 (939)
456 cd01494 AAT_I Aspartate aminot 99.3 8.1E-11 1.8E-15 116.9 15.2 166 300-506 3-170 (170)
457 PRK07812 O-acetylhomoserine am 99.3 4E-10 8.7E-15 127.8 22.6 242 292-589 64-354 (436)
458 TIGR00474 selA seryl-tRNA(sec) 99.3 4.2E-09 9.1E-14 119.5 30.5 328 248-641 76-453 (454)
459 cd00615 Orn_deC_like Ornithine 99.3 4.8E-11 1E-15 129.8 13.7 231 293-566 55-293 (294)
460 PRK08114 cystathionine beta-ly 99.2 4.4E-10 9.5E-15 125.1 21.1 241 291-589 56-316 (395)
461 PF01041 DegT_DnrJ_EryC1: DegT 99.2 1.1E-09 2.3E-14 123.1 24.2 283 273-616 5-308 (363)
462 PRK05939 hypothetical protein; 99.2 7.6E-10 1.6E-14 124.7 22.8 165 291-506 41-207 (397)
463 PRK14455 ribosomal RNA large s 99.2 1E-09 2.2E-14 120.4 22.7 188 689-891 116-324 (356)
464 PRK08134 O-acetylhomoserine am 99.2 6.6E-10 1.4E-14 126.3 21.9 246 292-589 59-350 (433)
465 PLN02724 Molybdenum cofactor s 99.2 3.8E-09 8.2E-14 129.9 29.3 352 254-645 35-486 (805)
466 TIGR00238 KamA family protein. 99.2 7.3E-10 1.6E-14 120.9 20.0 192 684-896 116-320 (331)
467 PF01053 Cys_Met_Meta_PP: Cys/ 99.2 9.6E-10 2.1E-14 122.2 21.0 240 289-589 47-310 (386)
468 COG4277 Predicted DNA-binding 99.2 2.1E-10 4.6E-15 114.5 13.9 193 689-886 61-278 (404)
469 PRK14463 ribosomal RNA large s 99.2 1.9E-09 4E-14 117.8 22.7 188 689-891 110-312 (349)
470 PRK14459 ribosomal RNA large s 99.2 2.3E-09 5.1E-14 116.7 22.7 192 689-891 128-346 (373)
471 PRK14468 ribosomal RNA large s 99.2 2.8E-09 6.1E-14 116.3 22.9 188 689-891 100-308 (343)
472 PRK05613 O-acetylhomoserine am 99.2 1.6E-09 3.4E-14 123.0 21.8 247 292-589 64-359 (437)
473 KOG0634|consensus 99.2 9.9E-09 2.2E-13 108.9 24.9 285 316-646 126-465 (472)
474 KOG4355|consensus 99.2 5.1E-10 1.1E-14 115.4 14.6 251 629-896 145-414 (547)
475 PRK14469 ribosomal RNA large s 99.2 3.8E-09 8.2E-14 116.2 22.5 188 689-892 108-313 (343)
476 TIGR01364 serC_1 phosphoserine 99.2 4.1E-09 8.8E-14 116.9 22.9 311 272-643 4-344 (349)
477 COG1180 PflA Pyruvate-formate 99.1 3.6E-09 7.7E-14 111.1 20.9 194 689-892 42-240 (260)
478 TIGR03531 selenium_SpcS O-phos 99.1 4.5E-09 9.7E-14 118.2 23.1 301 295-644 103-443 (444)
479 TIGR03799 NOD_PanD_pyr putativ 99.1 2.2E-08 4.9E-13 115.7 29.4 314 296-640 128-518 (522)
480 PF01212 Beta_elim_lyase: Beta 99.1 6.5E-11 1.4E-15 126.4 7.8 251 271-568 7-270 (290)
481 TIGR03820 lys_2_3_AblA lysine- 99.1 3.3E-09 7.2E-14 116.6 20.9 195 683-896 110-315 (417)
482 PLN02880 tyrosine decarboxylas 99.1 1.1E-08 2.5E-13 118.0 26.2 317 295-644 120-481 (490)
483 PRK14470 ribosomal RNA large s 99.1 7E-09 1.5E-13 112.4 22.7 186 689-890 104-306 (336)
484 TIGR03821 AblA_like_1 lysine-2 99.1 2E-09 4.2E-14 116.9 18.4 192 685-896 100-303 (321)
485 TIGR02618 tyr_phenol_ly tyrosi 99.1 8.9E-09 1.9E-13 114.0 23.3 344 254-648 38-427 (450)
486 PLN02263 serine decarboxylase 99.1 3.4E-08 7.4E-13 110.9 28.2 290 295-644 131-440 (470)
487 COG0399 WecE Predicted pyridox 99.1 4.6E-08 9.9E-13 106.6 28.4 239 273-568 15-268 (374)
488 TIGR00048 radical SAM enzyme, 99.1 8.3E-09 1.8E-13 113.2 22.6 188 689-891 112-320 (355)
489 PRK05355 3-phosphoserine/phosp 99.1 5.4E-09 1.2E-13 116.6 21.1 314 271-644 14-355 (360)
490 PRK13745 anaerobic sulfatase-m 99.1 7.4E-09 1.6E-13 117.6 22.4 180 682-866 14-206 (412)
491 PRK14462 ribosomal RNA large s 99.1 9.4E-09 2E-13 111.7 21.5 188 689-891 117-325 (356)
492 TIGR01366 serC_3 phosphoserine 99.1 9.7E-09 2.1E-13 114.8 21.9 311 272-644 15-357 (361)
493 PRK14467 ribosomal RNA large s 99.1 1.3E-08 2.8E-13 110.8 21.4 189 689-891 106-316 (348)
494 PRK14466 ribosomal RNA large s 99.1 2.2E-08 4.8E-13 107.7 22.7 189 689-891 110-312 (345)
495 TIGR03278 methan_mark_10 putat 99.1 1.4E-08 3.1E-13 112.4 21.8 187 689-885 29-235 (404)
496 PRK13758 anaerobic sulfatase-m 99.1 1.4E-08 2.9E-13 114.6 22.2 195 685-886 8-218 (370)
497 PLN02590 probable tyrosine dec 99.1 1.4E-07 3.1E-12 108.9 30.6 321 295-644 168-529 (539)
498 PRK06434 cystathionine gamma-l 99.1 1.1E-08 2.4E-13 114.2 20.7 237 292-589 59-308 (384)
499 cd00611 PSAT_like Phosphoserin 99.0 1.4E-08 3E-13 113.7 21.1 317 271-643 10-352 (355)
500 COG2108 Uncharacterized conser 99.0 3.4E-09 7.3E-14 108.4 14.3 202 684-904 31-254 (353)
No 1
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=9.8e-81 Score=671.63 Aligned_cols=422 Identities=42% Similarity=0.723 Sum_probs=383.6
Q ss_pred ccccccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCC
Q psy8199 221 AYKLGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLT 295 (965)
Q Consensus 221 a~~l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~ 295 (965)
...-++|||+++..... ..|.++ +||||.|||+|||.+|||||+++||++|+|.+|+++|++++.|++..+++
T Consensus 8 ~d~~~~whP~t~~~~~~--~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t 85 (449)
T COG0161 8 ADLSHLWHPFTQMRDPL--AEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFT 85 (449)
T ss_pred hhhhheecccccccccc--ccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccC
Confidence 35568899999988763 126655 99999999999999999999999999999999999999999999888899
Q ss_pred cHHHHHHHHHHHhhcC-CCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc-Ccc
Q psy8199 296 HKPVIKLSEKLSSLTQ-YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFK 373 (965)
Q Consensus 296 ~~~~~~la~~l~~~~~-~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~-~~~ 373 (965)
+++.++||++|+++.| .++++|||++|||||||.|+|+|++||+.+|+++|.++|+...+|||.|.+++|+++.. .++
T Consensus 86 ~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~ 165 (449)
T COG0161 86 HEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRH 165 (449)
T ss_pred CchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhh
Confidence 9999999999999999 45999999999999999999999999999999999999999999999999999999944 455
Q ss_pred chhcccCCCeeEecCCCCCCCC-CCCChhHHHHHHHHHHHHHHHhCC-CcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 374 EIYTSLLNKTYIITTPDSRNIN-KGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~le~~l~~~~-~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
..+.++.+++.++|.|..+... .+....++ ..++++||++|.+++ +++||||+||++++.+|+++||++||++++++
T Consensus 166 ~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~-~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~i 244 (449)
T COG0161 166 AFYDPLLPEVLHLPAPYAYRRGFFGEGDEEF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREI 244 (449)
T ss_pred hhccccccCceecCCCcccccCCCCCChHHH-HHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHH
Confidence 7888888999999999876544 34555566 789999999999886 89999999996666699999999999999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGN 531 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~ 531 (965)
|++||||||+|||.|||||||++|+++++|+.||++|+||+|+|||+|+|++++++++++.+..+. ...|.||+||+||
T Consensus 245 C~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~-~~~f~HG~TYsgh 323 (449)
T COG0161 245 CDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD-AGAFMHGHTYSGN 323 (449)
T ss_pred HHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhccc-CCeeccCCccccC
Confidence 999999999999999999999999999999999999999999999999999999999999998743 6789999999999
Q ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHc-ccCCCceeeeeceeEEEEEEEeecCccchh----hHHHHHHHH
Q psy8199 532 PLACCAALATLEIFNKDNILQRISQDMKKITKALTS-LITHPKIINFRQKGMIWAFDVIIEDPEQIE----TFSKKFFVA 606 (965)
Q Consensus 532 ~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~----~~~~~~~~~ 606 (965)
|++||+|+++|++++++++.+++++.+.+|.++|++ +..+|.|.+||+.|+|.++++. .+..+.. ....++...
T Consensus 324 PlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv-~d~~t~~~f~~~~~~~~~~~ 402 (449)
T COG0161 324 PLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELV-ADKATKTPFEARVGARVRAA 402 (449)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEe-cccccccchhhhHHHHHHHH
Confidence 999999999999999999999999999999999998 6778999999999999999998 5544442 334567888
Q ss_pred HHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhccccc
Q psy8199 607 ALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 607 l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~ 647 (965)
+.++|++++|.|+.+-++||+++|+++++++++++.+++..
T Consensus 403 ~~e~Gl~iRp~g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 403 ALERGLLIRPLGDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred HHHCCeEEeecCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998876654
No 2
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-77 Score=631.35 Aligned_cols=363 Identities=32% Similarity=0.520 Sum_probs=337.5
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.+||+||||.+|+++++|||+||.+++|+++|++++.|.+ ..+.+++..+|+++|++.+| ..++|+|+|||+|
T Consensus 34 ~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~s-n~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaE 111 (404)
T COG4992 34 AYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVS-NLFYNEPQAELAEKLVELSP-FADRVFFCNSGAE 111 (404)
T ss_pred cEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcc-cccCChHHHHHHHHHHhhCc-cccEEEEcCCcHH
Confidence 999999999999999999999999999999999999999998775 46889999999999999997 7999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|||+|+|+||.|+. .++|.+||+|.++|||+|.+++++++++.|+..|.|+.+++.++|+
T Consensus 112 A~EaAiKlARk~~~---~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf----------------- 171 (404)
T COG4992 112 ANEAALKLARKYTG---DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF----------------- 171 (404)
T ss_pred HHHHHHHHHHHHcC---CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-----------------
Confidence 99999999999953 2458899999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
||+++++++|+ ++++|||+|| ||+++|+++++++||+++|+||++||+|||+||||||+||||++|+++++|+.||
T Consensus 172 nDi~al~~ai~---~~taAvivEP-IQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PD 247 (404)
T COG4992 172 NDIEALEAAID---EDTAAVIVEP-IQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPD 247 (404)
T ss_pred CCHHHHHHHhc---cCeEEEEEec-ccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCC
Confidence 69999999996 4899999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
|+|++|+|||| +|+||+++++++++.+.. ..|++||+|||++||++.++|+++.++++.+++++++++|+++|
T Consensus 248 I~tlaK~LgGG-~PigA~la~~~~~~~~~~------G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L 320 (404)
T COG4992 248 ILTLAKALGGG-FPIGAMLATEEIASAFTP------GDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRL 320 (404)
T ss_pred EEEeeccccCC-ccceeeEEchhhhhcCCC------CcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHH
Confidence 99999999999 799999999777777654 47999999999999999999999999999999999999999999
Q ss_pred Hcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 566 TSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 566 ~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+++ .++|.+..|||+|+|+++++. .+ ..+..+.+.|.++|+++.+.+ +++||.||+++++++++++++++++
T Consensus 321 ~~l~~~~~~v~~vRG~GLmiGiel~-~~-----~~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~~ 394 (404)
T COG4992 321 RELKRRYPLVKEVRGRGLMIGIELK-EP-----YRARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDALER 394 (404)
T ss_pred HHHhhcCCceeeeecceeEEEEEec-Cc-----ccHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHHHHHH
Confidence 998 667878899999999999997 21 125578899999999998755 7999999999999999999999987
Q ss_pred cccc
Q psy8199 644 TFNE 647 (965)
Q Consensus 644 ~~~~ 647 (965)
++..
T Consensus 395 ~l~~ 398 (404)
T COG4992 395 ALAA 398 (404)
T ss_pred HHHH
Confidence 6654
No 3
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-74 Score=627.73 Aligned_cols=385 Identities=33% Similarity=0.537 Sum_probs=348.5
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCC-CCCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~v~~~~sGs 324 (965)
+||||+|||+||||.+|+++.++||+||.|++|+++|++++.|.+......++..+++++|.+.+|. +.++++|++|||
T Consensus 48 ~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGa 127 (447)
T COG0160 48 AYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGA 127 (447)
T ss_pred CEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcH
Confidence 9999999999999999999999999999999999999999987765555569999999999999997 688999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC-ccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS-FKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
||||+|+|+||.| +++..||+|.++|||+|.+++++|+... ++..+.++.+++.++|+|++++++.+...+++
T Consensus 128 eA~E~AiKiAr~~------Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~ 201 (447)
T COG0160 128 EAVEAAIKIARAY------TGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEEC 201 (447)
T ss_pred HHHHHHHHHHHHH------hCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhh
Confidence 9999999999999 6999999999999999999999999654 44667888888999999999998866555666
Q ss_pred HHHHHHHHHHHHHhC---CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccccc
Q psy8199 404 ARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA 480 (965)
Q Consensus 404 ~~~d~~~le~~l~~~---~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~ 480 (965)
.....+.+++.+... +.++||||+|| ||+++|.++||++||++++++|++||+++|+|||||||||||++|++|++
T Consensus 202 ~~~~~~~~e~~i~~~~~~~~~vAaiI~Ep-IQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~ 280 (447)
T COG0160 202 GDDALEYIERALFDLEVGPEEVAAIIIEP-IQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHF 280 (447)
T ss_pred hHHHHHHHHHHHHhhcCCCCceeEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhc
Confidence 666777788766443 56899999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Q psy8199 481 EIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKK 560 (965)
Q Consensus 481 ~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~ 560 (965)
|+.||++|+||+++|| +|+|++++++++++ +.. ..|++||+|||++||+|+|+|++++++++.+++.+.+++
T Consensus 281 gv~PDivt~aK~ig~G-~Pl~avv~r~ei~~-~~~------g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~ 352 (447)
T COG0160 281 GVEPDIVTLAKSLGGG-LPLSAVVGRAEIMD-WPP------GGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEY 352 (447)
T ss_pred CCCCCEEEecccccCC-CceeEEeccHHhcc-cCC------cccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 9999999999999998 79999999999998 333 258899999999999999999999999999999999999
Q ss_pred HHHHHHcc-cCCCceeeeeceeEEEEEEEeecCcc---chhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHHH
Q psy8199 561 ITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNE 633 (965)
Q Consensus 561 l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~---~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~~ 633 (965)
|+++|.++ .++|.|.+|||.|+|+++++. .+.. +....+.++.+.|+++|+++...| +++||.||+++++++
T Consensus 353 l~~~L~~l~~~~~~IgdVRG~Glm~giE~v-~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~ 431 (447)
T COG0160 353 LRDRLEELQEKHPLIGDVRGLGLMIGVELV-KDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEE 431 (447)
T ss_pred HHHHHHHHHhhcCceecccccceEEEEEEe-cCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHH
Confidence 99999999 789999999999999999998 4432 334567789999999999887654 899999999999999
Q ss_pred HHHHHHhhhcccc
Q psy8199 634 IQHMTSAIFQTFN 646 (965)
Q Consensus 634 i~~~~~~l~~~~~ 646 (965)
+++.++.+.+++.
T Consensus 432 ~d~~l~il~~al~ 444 (447)
T COG0160 432 LDEGLDILEEALK 444 (447)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887654
No 4
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.9e-70 Score=623.08 Aligned_cols=423 Identities=53% Similarity=0.934 Sum_probs=370.8
Q ss_pred ccccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcH
Q psy8199 223 KLGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHK 297 (965)
Q Consensus 223 ~l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~ 297 (965)
+...|||++....... ..|+.+ +||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+....++.++
T Consensus 19 ~~~~~~~~~~~~~~~~-~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~ 97 (453)
T PRK06943 19 LRAVWHPCTQMKHHER-LPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHE 97 (453)
T ss_pred hcccccCCcCcccccc-CCCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCH
Confidence 3446777655432210 125544 9999999999999999999999999999999999999999877665678899
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhc
Q psy8199 298 PVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 377 (965)
Q Consensus 298 ~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~ 377 (965)
...+|+++|++.+|..+++|+|++|||||++.|+|+|+.|+..+|.++|.+||+++++|||+|.+++++++...++..|.
T Consensus 98 ~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~ 177 (453)
T PRK06943 98 PAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYD 177 (453)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccc
Confidence 99999999999988667899999999999999999999998888888999999999999999999999999888888888
Q ss_pred ccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC
Q psy8199 378 SLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI 457 (965)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~ 457 (965)
++.+++.++|.|+..+.+.+...+++..+|+++++++++++++++||||+||++++++|+++||++||++|+++|++||+
T Consensus 178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gi 257 (453)
T PRK06943 178 PLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGV 257 (453)
T ss_pred cCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCC
Confidence 88888888888876665555555677778999999999877789999999993399999999999999999999999999
Q ss_pred eEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHH
Q psy8199 458 HLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCA 537 (965)
Q Consensus 458 llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aa 537 (965)
++|+|||+|||||+|++|+++++|+.||++|+||+|+|||+|+|++++++++++.+..+.....+.|++||+|||++|++
T Consensus 258 llI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aa 337 (453)
T PRK06943 258 HLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRA 337 (453)
T ss_pred EEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999988642112346799999999999999
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec
Q psy8199 538 ALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 617 (965)
Q Consensus 538 a~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 617 (965)
|+++|++++++++.+++++++++|+++|+++.+++.+.+++|.|+|+++++. .+..+.......+...++++||++.+.
T Consensus 338 a~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~-~~~~~~~~~~~~i~~~~~~~Gll~~~~ 416 (453)
T PRK06943 338 ALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVA-LDGDAARTFSRRFFEAALERELLLRPI 416 (453)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEc-cCCCcchHHHHHHHHHHHHCCcEEEec
Confidence 9999999999999999999999999999999778889999999999999996 232222334567888999999999988
Q ss_pred CCEEEEeCCcccCHHHHHHHHHhhhccccc
Q psy8199 618 GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 618 ~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~ 647 (965)
++.+||+||+++|+++++++++++.+++.+
T Consensus 417 g~~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 417 GTTVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred CCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999877654
No 5
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.8e-69 Score=615.35 Aligned_cols=422 Identities=42% Similarity=0.767 Sum_probs=366.2
Q ss_pred cccccccCcccccccccCC-Cce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcH
Q psy8199 224 LGLIHPKNNLKLKWRINLP-DDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHK 297 (965)
Q Consensus 224 l~f~~p~~~~~~~~~~~~p-~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~ 297 (965)
..+|+|++....... ..| +.+ +||||.|||+|||+.+|+|++++||+||+|++|+++|++++.+.+...+.++
T Consensus 29 ~~~~~~~~~~~~~~~-~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~ 107 (472)
T PRK08742 29 AVLWHPCTQMREHPH-TLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHE 107 (472)
T ss_pred cccccCCcccccccc-cCCCeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCH
Confidence 346777765432210 112 333 9999999999999999999999999999999999999998766655568899
Q ss_pred HHHHHHHHHHhhcCC-----CCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCc
Q psy8199 298 PVIKLSEKLSSLTQY-----KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 372 (965)
Q Consensus 298 ~~~~la~~l~~~~~~-----~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 372 (965)
+..+|+++|++.+|. ++++|+|++|||||||.|+|+||.|+..+|+++|.+||+++++|||+|.+++++++.+.+
T Consensus 108 ~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~ 187 (472)
T PRK08742 108 PAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLY 187 (472)
T ss_pred HHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCccc
Confidence 999999999999874 367999999999999999999999988888889999999999999999999999998878
Q ss_pred cchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy8199 373 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 452 (965)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~ 452 (965)
+..+.++.+++.++|.|+.++...+.....+...+++.++++++..+++++|||+||++++++|+++||++||++|+++|
T Consensus 188 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc 267 (472)
T PRK08742 188 RRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELC 267 (472)
T ss_pred ccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHH
Confidence 88888888888899988776655555555566678899999997667789999999955999999999999999999999
Q ss_pred HhcCCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCH
Q psy8199 453 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNP 532 (965)
Q Consensus 453 ~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~ 532 (965)
++||++||+|||+|||||+|++|+++++|+.||++|+||+|+|||+|+|++++++++++.+........+.|++||+|||
T Consensus 268 ~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnp 347 (472)
T PRK08742 268 DAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNP 347 (472)
T ss_pred HHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccH
Confidence 99999999999999999999999999999999999999999999889999999999999875421123467999999999
Q ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccch------hhHHHHHHHH
Q psy8199 533 LACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVA 606 (965)
Q Consensus 533 ~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~------~~~~~~~~~~ 606 (965)
++|++++++|++++++++.+++++++++|++.++.+.++|.+.+|||.|+|+++++. .+..+. ......+.+.
T Consensus 348 l~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~-~~~~~~~~~~~~~~~~~~~~~~ 426 (472)
T PRK08742 348 LACAAALATLDIFADDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELT-RGGNKRTPFPPAARVGLHAYRA 426 (472)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEec-cCccccccCCchhHHHHHHHHH
Confidence 999999999999999999999999999999888887778889999999999999997 332211 1234567888
Q ss_pred HHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhccccc
Q psy8199 607 ALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 607 l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~ 647 (965)
++++||++.+.+++|||.||+++++++++++++++.+++.+
T Consensus 427 ~~~~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 427 ALARGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred HHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999998899999999999999999999999877643
No 6
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-69 Score=617.15 Aligned_cols=400 Identities=26% Similarity=0.475 Sum_probs=351.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhcccccc-CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.+. ..+.+++..+|+++|++.+|.+.++|+|++|||
T Consensus 38 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGS 117 (459)
T PRK05965 38 ATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGS 117 (459)
T ss_pred eEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChh
Confidence 9999999999999999999999999999999999999998766543 256789999999999999987789999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
||||.|+|+||.|++.+|.++|.+||+++++|||+|.+++++++.+.++..+.++.++..++|.|..++.+.+.+...+.
T Consensus 118 EAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (459)
T PRK05965 118 DAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAII 197 (459)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHH
Confidence 99999999999998888888999999999999999999999998777777777766677777777655444333444556
Q ss_pred HHHHHHHHHHHHhCC-CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 405 RCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 405 ~~d~~~le~~l~~~~-~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
..++++++++++++. +++||||+|| +++++|+++||++||++|+++|++||++||+|||+|||||+|++|+++++|+.
T Consensus 198 ~~~~~~l~~~i~~~~~~~iAAvIvEP-iqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~ 276 (459)
T PRK05965 198 AASVAALRAKVAELGADNVAAFFCEP-IQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVV 276 (459)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEec-cccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCC
Confidence 678889999997653 7899999999 99999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCC-cccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNN-INIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~-~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
||++|+||+|+|||+|+|++++++++++.+..+.. ...+.|++||+|||++||+|+++|++++++++.+++++++++|.
T Consensus 277 PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~ 356 (459)
T PRK05965 277 PDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFA 356 (459)
T ss_pred CCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 99999999999998899999999999998864211 12367999999999999999999999999999999999999999
Q ss_pred HHHHcccCCCceeeeeceeEEEEEEEeecCccc------hhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHH
Q psy8199 563 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQ 635 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~------~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~ 635 (965)
++|+++.++|.+.+|||.|+|+++++. .+..+ .......+.+.|+++||++.+.+ +++||.||+++++++++
T Consensus 357 ~~l~~l~~~~~v~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~PpL~it~~ei~ 435 (459)
T PRK05965 357 AGLDALRAHPLVGDVRGRGLLGALELV-ADKATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFD 435 (459)
T ss_pred HHHHhhccCCCEEEEeecceEEEEEEe-ccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEECCCcCCHHHHH
Confidence 999998778889999999999999996 22111 11245678889999999999866 68999999999999999
Q ss_pred HHHHhhhccccc
Q psy8199 636 HMTSAIFQTFNE 647 (965)
Q Consensus 636 ~~~~~l~~~~~~ 647 (965)
++++++.+++..
T Consensus 436 ~~~~~l~~~l~~ 447 (459)
T PRK05965 436 LIFERTRKTLDD 447 (459)
T ss_pred HHHHHHHHHHHH
Confidence 999999877653
No 7
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-69 Score=614.42 Aligned_cols=422 Identities=24% Similarity=0.406 Sum_probs=362.4
Q ss_pred ccccccCccccccc-ccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhcccccc-CCCCcH
Q psy8199 225 GLIHPKNNLKLKWR-INLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHK 297 (965)
Q Consensus 225 ~f~~p~~~~~~~~~-~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~-~~~~~~ 297 (965)
.+|||++....... ...|+++ +||||.|||+||||.+|+|++++||+||+|++|+++|++++.+++. ..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~ 94 (461)
T PRK07482 15 HFFHPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTE 94 (461)
T ss_pred hccCCcccccccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCH
Confidence 46677654432210 0125555 9999999999999999999999999999999999999999865443 367899
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhc
Q psy8199 298 PVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 377 (965)
Q Consensus 298 ~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~ 377 (965)
+..+|+++|++.+|.+.++|+|++|||||+|+|+|+||.|+..+|.++|.+||+++++|||+|.+++++++.+.++..+.
T Consensus 95 ~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~ 174 (461)
T PRK07482 95 ASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFD 174 (461)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccC
Confidence 99999999999998678999999999999999999999998888888999999999999999999999999888888888
Q ss_pred ccCCCeeEecCCCCCCCC-CCCChhHHHHHHHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy8199 378 SLLNKTYIITTPDSRNIN-KGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 455 (965)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 455 (965)
++.+++.++|.|..+..+ .+...+.+...|+++|++++.+. ++++||||+|| +++++|+++|+++|+++|+++|++|
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EP-vqg~gG~~~~~~~yl~~lr~lc~~~ 253 (461)
T PRK07482 175 LPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEP-VLGTGGIVPPPAGYWPAIQAVLKKY 253 (461)
T ss_pred CCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHh
Confidence 888888888887655433 23344556677899999998643 57899999999 9999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccC-CcccccccCCCCCCHHH
Q psy8199 456 NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLA 534 (965)
Q Consensus 456 g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~-~~~~~~~~~t~~~~~~~ 534 (965)
|++||+|||+|||||+|++|+++++|+.||++|+||+|+|||+|+|++++++++++.+.... ....+.|++||+|||++
T Consensus 254 giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~ 333 (461)
T PRK07482 254 DILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPIC 333 (461)
T ss_pred CCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHH
Confidence 99999999999999999999999999999999999999999779999999999998886421 12246799999999999
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccch------hhHHHHHHHHH
Q psy8199 535 CCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAA 607 (965)
Q Consensus 535 ~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~------~~~~~~~~~~l 607 (965)
||+|+++|++++++++.+++++++++|.++|+++ .++|.+.+|+|.|+|+++++. .+.... ......+...|
T Consensus 334 ~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~-~~~~~~~~~~~~~~~~~~i~~~~ 412 (461)
T PRK07482 334 AAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFV-ADRDDRTPFDPALKIGPQVSAAA 412 (461)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEec-cCCCcCCCCChhhHHHHHHHHHH
Confidence 9999999999999999999999999999999987 678889999999999999996 222111 12345788899
Q ss_pred HHcCcEEeec--CCEEEEeCCcccCHHHHHHHHHhhhcccccH
Q psy8199 608 LKNELLLRPI--GNTVYLMPPYILNKNEIQHMTSAIFQTFNEL 648 (965)
Q Consensus 608 ~~~Gi~~~~~--~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~ 648 (965)
+++||++.+. ++.+||.||+++++++++++++++.+++.++
T Consensus 413 ~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 413 LERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred HHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999998653 6899999999999999999999998776543
No 8
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=8.6e-69 Score=610.78 Aligned_cols=402 Identities=49% Similarity=0.877 Sum_probs=360.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.+..++.++...+|+++|++.+|.+.++|+|++||||
T Consensus 39 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsE 118 (466)
T PRK07030 39 VWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSS 118 (466)
T ss_pred cEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHH
Confidence 99999999999999999999999999999999999999998776655788999999999999999867889999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||+.|+|+||.|+..+|.++|.+||+++++|||+|.+++++++.+.++..+.++.+++.++|.|+.++...+.....+..
T Consensus 119 Ave~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~ 198 (466)
T PRK07030 119 AIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSR 198 (466)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHH
Confidence 99999999999988889889999999999999999999999998777777888888888899887766655556667778
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
++++++++++.+.++++||||+||++|+++|.++|+++|+++|+++|++||+++|+|||+|||||+|++|+++++|+.||
T Consensus 199 ~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PD 278 (466)
T PRK07030 199 RMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPD 278 (466)
T ss_pred HHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCC
Confidence 89999999998777899999999955999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 564 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~-~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~ 564 (965)
++||||+|+|||+|+|++++++++++.+..+. ....+.|++||+|||++|++|+++|++++++++.+++++++++|+++
T Consensus 279 iv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~ 358 (466)
T PRK07030 279 FLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEA 358 (466)
T ss_pred EEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 99999999999889999999999999885321 12346799999999999999999999999999999999999999999
Q ss_pred HHcccCCCceeeeeceeEEEEEEEeecCccc------hhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHH
Q psy8199 565 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMT 638 (965)
Q Consensus 565 L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~------~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~ 638 (965)
|+++.++|.+.+|+|.|+|+++++. .+... .......+.+.|+++|+++.+.++.+||.||++++++++++++
T Consensus 359 L~~l~~~~~v~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~i~~~Ppl~it~~eid~~~ 437 (466)
T PRK07030 359 TAHLADHPHVAEVRQTGMILAIEMV-QDKASKTPYPWQERRGLKVYQHALERGALLRPLGSVVYFLPPYVITPEQIDFLA 437 (466)
T ss_pred HHHHhcCCCEEEeEeceeEEEEEec-cCccccccCcchhHHHHHHHHHHHHCCeEEEecCCEEEEECCccCCHHHHHHHH
Confidence 9998778889999999999999996 22211 1112346888999999999998889999999999999999999
Q ss_pred HhhhcccccH
Q psy8199 639 SAIFQTFNEL 648 (965)
Q Consensus 639 ~~l~~~~~~~ 648 (965)
+++.+++..+
T Consensus 438 ~~l~~al~~~ 447 (466)
T PRK07030 438 EVASEGIDIA 447 (466)
T ss_pred HHHHHHHHHH
Confidence 9998777543
No 9
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-68 Score=608.40 Aligned_cols=421 Identities=30% Similarity=0.514 Sum_probs=364.3
Q ss_pred ccccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhcccccc-CCCCc
Q psy8199 223 KLGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTH 296 (965)
Q Consensus 223 ~l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~-~~~~~ 296 (965)
...+|||++....... ..|+.+ +||||.|||+|||+.+|+|+++|||+||+|++|+++|++++.+.+. .++.+
T Consensus 7 ~~~~w~p~~~~~~~~~-~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~ 85 (449)
T PRK07481 7 ARRFWHPMAHPAEMKA-RPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTH 85 (449)
T ss_pred cccccCCccccccccc-CCCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCC
Confidence 4568999988876420 145555 9999999999999999999999999999999999999998766543 35789
Q ss_pred HHHHHHHHHHHhhcC-CCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccch
Q psy8199 297 KPVIKLSEKLSSLTQ-YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 375 (965)
Q Consensus 297 ~~~~~la~~l~~~~~-~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~ 375 (965)
+...+++++|++.+| .+.++|+|++|||||+|.|+|+||.|++.+|.++|.+||+++++|||+|.+++++++...++..
T Consensus 86 ~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~ 165 (449)
T PRK07481 86 PRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRN 165 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccc
Confidence 999999999999984 4578999999999999999999999998888888999999999999999999999988777777
Q ss_pred hcccCCCeeEecCCCCCCCCCC-CChhHHHHHHHHHHHHHHH-hCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy8199 376 YTSLLNKTYIITTPDSRNINKG-NSANEIARCAIFDLEILLK-KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 453 (965)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l~-~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~ 453 (965)
+.+..+++.+++.|.....+.+ .+.+.+.....+.+|+++. ..++++||||+|| +++++|.++|+++||++|+++|+
T Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEP-vqg~gG~~~~~~~fl~~lr~lc~ 244 (449)
T PRK07481 166 YEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEP-VQGAGGVIVPPANFWPLVREVCD 244 (449)
T ss_pred cCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEec-ccCCcCCccCCHHHHHHHHHHHH
Confidence 7888888888888866554433 2344555666788888886 3357899999999 99999999999999999999999
Q ss_pred hcCCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCC-cccccccCCCCCCH
Q psy8199 454 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNN-INIFLHSHSYSGNP 532 (965)
Q Consensus 454 ~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~-~~~~~~~~t~~~~~ 532 (965)
+||+++|+|||+|||||+|++|+++++|+.||++|+||+|+|||+|+|++++++++++.+..... ...+.|++||+|||
T Consensus 245 ~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnp 324 (449)
T PRK07481 245 RHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHP 324 (449)
T ss_pred HcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCH
Confidence 99999999999999999999999999999999999999999998899999999999998864211 12467999999999
Q ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccc------hhhHHHHHHH
Q psy8199 533 LACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFV 605 (965)
Q Consensus 533 ~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~------~~~~~~~~~~ 605 (965)
++|++|+++|++++++++.+++++++++|+++|+++ .+++.+.+++|.|+|+++++. .+..+ .......+..
T Consensus 325 l~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~-~~~~~~~~~~~~~~~~~~~~~ 403 (449)
T PRK07481 325 VACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLV-ADKATREPIDPSKGYANAVAD 403 (449)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEec-ccccccCCCCchhHHHHHHHH
Confidence 999999999999999999999999999999999998 458888999999999999996 22111 1234557888
Q ss_pred HHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 606 AALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 606 ~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
.|+++||++.+.++.+||+||+++|+++++++++++.+++.
T Consensus 404 ~~~~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~ 444 (449)
T PRK07481 404 VARENGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLS 444 (449)
T ss_pred HHHhCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999888899999999999999999999887653
No 10
>KOG1404|consensus
Probab=100.00 E-value=4.2e-69 Score=549.98 Aligned_cols=386 Identities=29% Similarity=0.424 Sum_probs=342.9
Q ss_pred CCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCC
Q psy8199 241 LPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG 315 (965)
Q Consensus 241 ~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~ 315 (965)
.|+.| +||+|.+|++|||+.+|.+++++||+||+|++|+.+|+..+-|.+ ..+.+++..++|+.|++.+|.+++
T Consensus 32 ~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t-~~~~~~pi~~~Ae~L~s~~P~~l~ 110 (442)
T KOG1404|consen 32 KPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTT-SGYLNPPIHDLAEALVSKLPGDLK 110 (442)
T ss_pred CCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEee-ccccCCcHHHHHHHHHHhCCCCce
Confidence 67766 999999999999999999999999999999999999998876654 678999999999999999999999
Q ss_pred eEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCC
Q psy8199 316 HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNIN 395 (965)
Q Consensus 316 ~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (965)
.++|+||||||||+|+++||.| ++.-+||.+..+|||.|..++++++...|+..+....+++.+.+.|+.++.+
T Consensus 111 ~vfF~nsGsEANelal~mar~Y------t~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~ 184 (442)
T KOG1404|consen 111 VVFFVNSGSEANELALKMARLY------TGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGI 184 (442)
T ss_pred EEEEecCCchHHHHHHHHHHHh------cCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCccccc
Confidence 9999999999999999999999 4888999999999999999999999999998888777788888888877777
Q ss_pred CCCCh-hHHHHHHHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc
Q psy8199 396 KGNSA-NEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 473 (965)
Q Consensus 396 ~~~~~-~~~~~~d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~ 473 (965)
++.+. .++...-.++++..+... +..+|++|.|| |++.+|++.+|++||+++.++|+++|.++|+|||||||||+|.
T Consensus 185 ~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEt-IqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~ 263 (442)
T KOG1404|consen 185 FGGSNEEEASDRYAKELEDLILYDGPETVAAFIAET-IQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGH 263 (442)
T ss_pred CCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeeh-hccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccc
Confidence 55443 333333456666666443 66799999999 9999999999999999999999999999999999999999999
Q ss_pred cccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHH
Q psy8199 474 FFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQR 553 (965)
Q Consensus 474 ~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~ 553 (965)
+|+++..|+.|||+|++|++|+| +|+||++.++||++.+.+. ..|..||+|||++||+++|+|++++++++.++
T Consensus 264 ~wgfe~h~v~PDIvTmAKgiGnG-~Pl~AVvtt~EIa~v~~~~-----~~~fnTyggnP~a~avg~aVL~Vikee~LqE~ 337 (442)
T KOG1404|consen 264 MWGFESHGVVPDIVTMAKGIGNG-FPLGAVVTTPEIADVLNQK-----SSHFNTYGGNPVACAVGLAVLKVIKEENLQEN 337 (442)
T ss_pred cccccccCCCccHHHHHhhccCC-CcceeeecCHHHHHHHHhc-----cccccccCCCchhHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999 7999999999999999872 22889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccch----hhHHHHHHHHHHHcCcEEeec---CCEEEEeC
Q psy8199 554 ISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI----ETFSKKFFVAALKNELLLRPI---GNTVYLMP 625 (965)
Q Consensus 554 ~~~~~~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~----~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p 625 (965)
..+.+.+|+++|.++ .++|.|++|||+|+|++++++ ++.+.+ ......+.+.|.+.|+++.-+ |+++|++|
T Consensus 338 aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V-~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaP 416 (442)
T KOG1404|consen 338 AAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELV-SDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAP 416 (442)
T ss_pred HHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEe-cccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecC
Confidence 999999999999999 678999999999999999998 443111 123346789999999999654 47999999
Q ss_pred CcccCHHHHHHHHHhh
Q psy8199 626 PYILNKNEIQHMTSAI 641 (965)
Q Consensus 626 ~~~~t~~~i~~~~~~l 641 (965)
|+++|.+|++.+++..
T Consensus 417 PlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 417 PLCITKEDIDFAVEYF 432 (442)
T ss_pred CeeccHHHHHHHHHHH
Confidence 9999999997766644
No 11
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.6e-68 Score=606.54 Aligned_cols=423 Identities=39% Similarity=0.704 Sum_probs=367.3
Q ss_pred ccccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcH
Q psy8199 223 KLGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHK 297 (965)
Q Consensus 223 ~l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~ 297 (965)
.-.+|||++...... ...|+.+ +||||.|||+|||+.+++|+.+|||+||+|++|+++|++++.+.+..++.++
T Consensus 21 ~~~~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~ 99 (460)
T PRK06916 21 KAYVWHPFTQMKDYL-EEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANV 99 (460)
T ss_pred hhccccccccccccc-cCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCH
Confidence 345677765432210 0135555 9999999999999999999999999999999999999999876655567899
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhc
Q psy8199 298 PVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 377 (965)
Q Consensus 298 ~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~ 377 (965)
...+|+++|++.+|.++++|+|++||||||+.|+|+||.|++.+|.++|.+||+++++|||.+.+++++++...++..+.
T Consensus 100 ~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~ 179 (460)
T PRK06916 100 PSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYS 179 (460)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccC
Confidence 99999999999998667899999999999999999999998888889999999999999999999999999888888888
Q ss_pred ccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC
Q psy8199 378 SLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI 457 (965)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~ 457 (965)
++.+++.++|.|+.++.+.+...+.+...|+++++++++++++++||||+||++++++|+++|+++||++|+++|++||+
T Consensus 180 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~ 259 (460)
T PRK06916 180 SLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNV 259 (460)
T ss_pred CCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 88888888888866655444344566677899999999877789999999994499999999999999999999999999
Q ss_pred eEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccC-CcccccccCCCCCCHHHHH
Q psy8199 458 HLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACC 536 (965)
Q Consensus 458 llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~-~~~~~~~~~t~~~~~~~~a 536 (965)
++|+|||+|||||+|++|+++++|+.||++|+||+|+|||+|+|++++++++++.+..+. ....+.|++||++||++|+
T Consensus 260 llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~a 339 (460)
T PRK06916 260 LFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCA 339 (460)
T ss_pred EEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHH
Confidence 999999999999999999999999999999999999999889999999999998875311 1234678999999999999
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccc------hhhHHHHHHHHHHHc
Q psy8199 537 AALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKN 610 (965)
Q Consensus 537 aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~------~~~~~~~~~~~l~~~ 610 (965)
+++++|++++++++.+++++++++|++.|+++.+++.+.+|+|.|+|+++++. .+..+ .......+...|+++
T Consensus 340 aa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 418 (460)
T PRK06916 340 VALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELV-KNKETKEPFEWTERVGVQVCKRSREL 418 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEee-cccccccCCCchhhHHHHHHHHHHHC
Confidence 99999999998999999999999999999999778888999999999999997 22111 112345688899999
Q ss_pred CcEEeecCCEEEEeCCcccCHHHHHHHHHhhhccccc
Q psy8199 611 ELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 611 Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~ 647 (965)
||++.+.++.+||.||+++++++++++++++.+++.+
T Consensus 419 Gvl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 419 GMLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISD 455 (460)
T ss_pred CeEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 9999998899999999999999999999998876643
No 12
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=1.4e-67 Score=600.94 Aligned_cols=397 Identities=29% Similarity=0.477 Sum_probs=346.0
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.+ ..+.++...+|+++|++.+|. .++|+|++||||
T Consensus 39 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~lae~l~~~~~~-~~~v~f~~sGse 116 (451)
T PRK07678 39 AWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFP-LTQSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSE 116 (451)
T ss_pred eEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccc-cccCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHH
Confidence 999999999999999999999999999999999999999876554 346789999999999999874 469999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|++.|+|+||.|++.+|+++|.+||.++++|||++.+++++++.+.++..+.++.+++.++|.|+..+.+.+...+.+..
T Consensus 117 A~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (451)
T PRK07678 117 ANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDL 196 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHH
Confidence 99999999999988888888999999999999999999999998777777778888888888887665543333333444
Q ss_pred HHHHHHHHHHH-hCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCc
Q psy8199 406 CAIFDLEILLK-KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 484 (965)
Q Consensus 406 ~d~~~le~~l~-~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 484 (965)
..++.++++++ ..++++||||+|| +++++|+++|+++||++|+++|++||+++|+|||+|||||+|++|+++++|+.|
T Consensus 197 ~~~~~l~~~~~~~~~~~iAAvi~EP-iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~P 275 (451)
T PRK07678 197 ECVKEIDRVMTWELSETIAAVIMEP-IITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKP 275 (451)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCC
Confidence 45667888886 3367899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Q psy8199 485 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 564 (965)
Q Consensus 485 Divt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~ 564 (965)
|++|+||+|+|||+|+|++++++++++.+........+.|++||++||++|++|+++|++++++++.+++++++++|+++
T Consensus 276 Divt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~ 355 (451)
T PRK07678 276 DIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQ 355 (451)
T ss_pred CEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999999988999999999999988642222346799999999999999999999999889999999999999999
Q ss_pred HHcc-cCCCceeeeeceeEEEEEEEeecCccc----hhhHHHHHHHHHHHcCcEEeec-------CCEEEEeCCcccCHH
Q psy8199 565 LTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ----IETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKN 632 (965)
Q Consensus 565 L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~----~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~~p~~~~t~~ 632 (965)
|+++ .+++.+.+|+|.|+|+++++. .+..+ .......+...|+++||++.+. ++.+||+||+++|++
T Consensus 356 l~~~~~~~~~v~~vrg~Gl~~~i~~~-~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~ 434 (451)
T PRK07678 356 LKEELGEHPLVGDIRGKGLLVGIELV-NDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSE 434 (451)
T ss_pred HHHHHhcCCCEEEEEeeceEEEEEEe-cCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHH
Confidence 9765 778888999999999999996 22111 1234557888999999998763 278999999999999
Q ss_pred HHHHHHHhhhcccc
Q psy8199 633 EIQHMTSAIFQTFN 646 (965)
Q Consensus 633 ~i~~~~~~l~~~~~ 646 (965)
+|+++++++.+++.
T Consensus 435 eid~~~~~l~~~l~ 448 (451)
T PRK07678 435 EIAFIVGTLKTALE 448 (451)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999876553
No 13
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=1.8e-67 Score=602.88 Aligned_cols=422 Identities=27% Similarity=0.463 Sum_probs=358.2
Q ss_pred ccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccC-CCCcHH
Q psy8199 225 GLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLS-NLTHKP 298 (965)
Q Consensus 225 ~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~-~~~~~~ 298 (965)
.+|||++...... ...|+++ +||||.|||+||||.+|+|+.+|||+||+|++|+++|++++.+++.. .+.+++
T Consensus 56 ~~~~p~~~~~~~~-~~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~ 134 (504)
T PLN02760 56 DMLAPFTAGWQST-DLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKP 134 (504)
T ss_pred CcccCcccccccc-cCCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHH
Confidence 5689988876532 1245555 99999999999999999999999999999999999999987654322 467899
Q ss_pred HHHHHHHHHhhc-CCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhc
Q psy8199 299 VIKLSEKLSSLT-QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 377 (965)
Q Consensus 299 ~~~la~~l~~~~-~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~ 377 (965)
..+|+++|.+.+ +.+.++|+|++||||||++|+|+||.|++.+|.++|.+||+++++|||++.+++++++.+.++..+.
T Consensus 135 ~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~ 214 (504)
T PLN02760 135 SLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFD 214 (504)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCC
Confidence 999999999985 4456799999999999999999999998888888899999999999999999999998776666666
Q ss_pred ccCCCeeEecCCCCCCCC-CCCChhHHHHHHHHHHHHHHHh-CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy8199 378 SLLNKTYIITTPDSRNIN-KGNSANEIARCAIFDLEILLKK-NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 455 (965)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~le~~l~~-~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 455 (965)
+..+.+.+++.|..++.. .....+.+...+.++|++++.+ .++++|+||+|| +++++|+++||++||++|+++|++|
T Consensus 215 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EP-v~g~gG~~~p~~~yl~~lr~lc~~~ 293 (504)
T PLN02760 215 LPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEP-VMGAGGVIPPPATYFEKIQAVLKKY 293 (504)
T ss_pred CCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 666667777777644432 1223334444566778877753 356799999999 9999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccC-CcccccccCCCCCCHHH
Q psy8199 456 NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLA 534 (965)
Q Consensus 456 g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~-~~~~~~~~~t~~~~~~~ 534 (965)
|++||+|||+|||||+|++|+++++|+.||++||||+|+|||+|+|++++++++++.+.... ....+.|++||++||++
T Consensus 294 g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~ 373 (504)
T PLN02760 294 DILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVS 373 (504)
T ss_pred CCEEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999889999999999999886421 12246799999999999
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccch------hhHHHHHHHHHH
Q psy8199 535 CCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAAL 608 (965)
Q Consensus 535 ~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~------~~~~~~~~~~l~ 608 (965)
|++|+++|++++++++.+++++++++|+++|+++.+++.+.+|+|.|+|+++++. .+..+. ......+.+.|+
T Consensus 374 ~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~~~~i~~~~~ 452 (504)
T PLN02760 374 CAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFV-DNKSPNDPFPAEWGVGAYFGAECK 452 (504)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEe-cCCcccccccchhHHHHHHHHHHH
Confidence 9999999999998899999999999999999999778888999999999999996 222111 123556888999
Q ss_pred HcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhcccccHH
Q psy8199 609 KNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNELD 649 (965)
Q Consensus 609 ~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~~ 649 (965)
++||++.+.++.+||+||+++++++|+++++++.+++..++
T Consensus 453 ~~Gvl~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 453 KRGMLVRVAGDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred hCCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999998888999999999999999999999987776553
No 14
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-67 Score=598.04 Aligned_cols=399 Identities=29% Similarity=0.518 Sum_probs=348.2
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+||||.+|+|+++|||+||+|++|+++|++++.+.+...+.++...+|+++|++.+|.+.++|+|++||||
T Consensus 22 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsE 101 (443)
T PRK07483 22 IYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSE 101 (443)
T ss_pred EEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHH
Confidence 99999999999999999999999999999999999999987655444577899999999999999867889999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCC-CCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNIN-KGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 404 (965)
|+|.|+|+||.|++.+|.++|.+||+++++|||+|.+++++++...++..+.+..+++.++|.|..++.. .+.....+.
T Consensus 102 Ave~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (443)
T PRK07483 102 AVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYG 181 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHH
Confidence 9999999999998888888999999999999999999999999877777777777778888877544433 123344455
Q ss_pred HHHHHHHHHHHHh-CCCcEEEEEEcccccc-CCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC
Q psy8199 405 RCAIFDLEILLKK-NHNKIAAIIIEPLVQC-AGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 482 (965)
Q Consensus 405 ~~d~~~le~~l~~-~~~~~aaii~ep~v~~-~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~ 482 (965)
..+++++++++.. ..+++||||+|| +++ .+|+++|+++||++|+++|++||+++|+|||+|||||+|++|+++++|+
T Consensus 182 ~~~~~~l~~~~~~~~~~~iAAvivEP-iqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv 260 (443)
T PRK07483 182 QRLADELEAKILELGPDTVAAFVAET-VVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV 260 (443)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeC-cccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC
Confidence 5567888887753 357899999999 998 5799999999999999999999999999999999999999999999999
Q ss_pred CcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 483 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 483 ~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
.||++|+||+|+||++|+|++++++++++.+.. ....+.|++||++||++|++++++|++++++++++++++++++|+
T Consensus 261 ~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~--~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~ 338 (443)
T PRK07483 261 APDLVTIAKGLGAGYQPIGAVLASDRIYDAIAD--GSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLR 338 (443)
T ss_pred CCCeeeehhhhccCccccEEEEEcHHHHHHHhc--CCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 999999999999997799999999999998864 122457999999999999999999999999999999999999999
Q ss_pred HHHHcc-cCCCceeeeeceeEEEEEEEeecCccc------hhhHHHHHHHHHHHcCcEEeec--------CCEEEEeCCc
Q psy8199 563 KALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKNELLLRPI--------GNTVYLMPPY 627 (965)
Q Consensus 563 ~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~------~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR~~p~~ 627 (965)
++|+++ .++|.+.+|||.|+|+++++. .+..+ .......+.+.++++|+++.+. ++++||.||+
T Consensus 339 ~~L~~l~~~~~~i~~vRG~Glm~gie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL 417 (443)
T PRK07483 339 ARLRERLGQHPHVGDIRGRGLFVGVELV-ADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPF 417 (443)
T ss_pred HHHHHHHhcCCCeeeEeecccEEEEEEe-ecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCC
Confidence 999887 678888999999999999996 22111 1123456888999999999764 3699999999
Q ss_pred ccCHHHHHHHHHhhhcccccH
Q psy8199 628 ILNKNEIQHMTSAIFQTFNEL 648 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~~~~~~ 648 (965)
++++++++++++++.+++.++
T Consensus 418 ~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 418 IITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999998877543
No 15
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-67 Score=598.43 Aligned_cols=422 Identities=27% Similarity=0.445 Sum_probs=362.9
Q ss_pred cccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCC-CCcH
Q psy8199 224 LGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN-LTHK 297 (965)
Q Consensus 224 l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~-~~~~ 297 (965)
-.+|||+....... ...|+.+ +||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.+... +.++
T Consensus 17 ~~~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~ 95 (466)
T PRK07036 17 RHLLHPWHDFSSLG-KEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNA 95 (466)
T ss_pred cccccCccCccccc-cCCCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCH
Confidence 35677776543221 0135555 999999999999999999999999999999999999999876654443 7899
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhc
Q psy8199 298 PVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 377 (965)
Q Consensus 298 ~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~ 377 (965)
+..+|+++|++..|.+.++|+|++||||||+.|+|+||.|+..+|.++|.+||+++++|||+|.+++++++.+.++..|.
T Consensus 96 ~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~ 175 (466)
T PRK07036 96 PAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFD 175 (466)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccccccc
Confidence 99999999999998678899999999999999999999998888888899999999999999999999999887777888
Q ss_pred ccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHh-CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy8199 378 SLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKK-NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 456 (965)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 456 (965)
+..+.+.++|.|..++.+.+.+...+...+++.+++.+.. .++++||||+|| +++++|+++|+++||++|+++|++||
T Consensus 176 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EP-v~g~gG~~~p~~~yl~~lr~lc~~~g 254 (466)
T PRK07036 176 YASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEP-ILGSGGVIVPPPGYHARMREICRRYD 254 (466)
T ss_pred CCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeC-CcCCCCCccCCHHHHHHHHHHHHHcC
Confidence 7777788888887665555555455555567778877754 357899999999 99999999999999999999999999
Q ss_pred CeEEEeccccCCCccccccccc-ccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccC-CcccccccCCCCCCHHH
Q psy8199 457 IHLIADEIAVGCGRTGKFFACE-HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLA 534 (965)
Q Consensus 457 ~llI~DEv~tg~gr~G~~~~~~-~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~-~~~~~~~~~t~~~~~~~ 534 (965)
+++|+|||+|||||+|++|+++ ++|+.||++|+||+|+|||+|+|++++++++++.+.... ....+.|++||++||++
T Consensus 255 ~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~ 334 (466)
T PRK07036 255 ILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVA 334 (466)
T ss_pred CEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHH
Confidence 9999999999999999999998 789999999999999999889999999999999886411 11236789999999999
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccc------hhhHHHHHHHHHH
Q psy8199 535 CCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAAL 608 (965)
Q Consensus 535 ~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~------~~~~~~~~~~~l~ 608 (965)
|++++++|++++++++.+++++++++|+++|+++.++|.+.+|+|.|+|+++++. .+... .......+.+.|+
T Consensus 335 ~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~-~~~~~~~~~~~~~~~~~~~~~~~~ 413 (466)
T PRK07036 335 CAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECV-ADKGSKALLPEDIAIGQRIDRHCQ 413 (466)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEc-cCccccCCCCchhHHHHHHHHHHH
Confidence 9999999999998999999999999999999988778889999999999999996 22111 1224556888999
Q ss_pred HcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhcccccH
Q psy8199 609 KNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEL 648 (965)
Q Consensus 609 ~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~ 648 (965)
++||++.+.++.+||+||+++|+++|+++++++.+++..+
T Consensus 414 ~~Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 414 ERGLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred HCCcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999887899999999999999999999998877554
No 16
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=4.4e-67 Score=596.03 Aligned_cols=399 Identities=28% Similarity=0.477 Sum_probs=346.6
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhcccccc-CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+... ..+.++...+|+++|++.+|.+.++|+|++|||
T Consensus 42 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGs 121 (456)
T PRK07480 42 VYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGS 121 (456)
T ss_pred eEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcH
Confidence 9999999999999999999999999999999999999998765432 357899999999999999986788999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
||++.|+|+||.|++.+|.++|.+||.++++|||+|.+++++++...++..+.+..+++.+++.|..+++..+.+.+.+.
T Consensus 122 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (456)
T PRK07480 122 EANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFG 201 (456)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHH
Confidence 99999999999998888888899999999999999999999998766565555556677788877665544333344454
Q ss_pred HHHHHHHHHHHHh-CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 405 RCAIFDLEILLKK-NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 405 ~~d~~~le~~l~~-~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
..++++|++.+.+ .+++++|||+|| +++++|+++||++||++|+++|++||+++|+|||+|||||+|++|+++++|+.
T Consensus 202 ~~~~~~l~~~~~~~~~~~vAAvi~EP-iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~ 280 (456)
T PRK07480 202 LAAARQLEAKILELGADNVAAFIGEP-IQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIK 280 (456)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCC
Confidence 4456888766643 357899999999 99999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHH-HHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI-SQDMKKIT 562 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~-~~~~~~l~ 562 (965)
||++||||+|+|||+|+|++++++++++.+.. ....+.|++||++||++|++|+++|++++++++.+++ ++++++|+
T Consensus 281 PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~--~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~ 358 (456)
T PRK07480 281 PDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIE--EGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQ 358 (456)
T ss_pred CCeeeeehhhccCCccceEEEEcHHHHHHHhc--CCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999998899999999999998842 1134679999999999999999999999999999999 69999999
Q ss_pred HHHHcccCCCceeeeeceeEEEEEEEeecCccch------hhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHH
Q psy8199 563 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQH 636 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~------~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~ 636 (965)
++|+++.++|.+.+|+|.|+|+++++. .+.... ......+.+.|+++||++.+.++.+||+||++++++++++
T Consensus 359 ~~l~~l~~~~~i~~vrG~Glm~gie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~l~~~Ppl~it~~eid~ 437 (456)
T PRK07480 359 KRLRELADHPLVGEVRGVGLVGAIELV-KDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDRMIISPPLVITHAEIDE 437 (456)
T ss_pred HHHHHhhcCCCeeeEEeecceEEEEEe-ccccccccCcchhhHHHHHHHHHHHCCcEEeecCCEEEEECCCCCCHHHHHH
Confidence 999988778888999999999999996 221111 1123467788999999999877899999999999999999
Q ss_pred HHHhhhcccccH
Q psy8199 637 MTSAIFQTFNEL 648 (965)
Q Consensus 637 ~~~~l~~~~~~~ 648 (965)
+++++.+++..+
T Consensus 438 ~~~~l~~al~~~ 449 (456)
T PRK07480 438 LVEKARKALDAT 449 (456)
T ss_pred HHHHHHHHHHHH
Confidence 999998877543
No 17
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=3.7e-66 Score=589.96 Aligned_cols=402 Identities=28% Similarity=0.489 Sum_probs=351.2
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhcccccc-CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGs 324 (965)
+||||.|||+||||.+|+|+.++||+||+|++|+++|++++.+.+. +.+.++...+++++|++.+|.+.++|+|++|||
T Consensus 40 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGs 119 (460)
T PRK06105 40 IYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGS 119 (460)
T ss_pred EEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcH
Confidence 9999999999999999999999999999999999999998765432 346799999999999999986688999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCC-CCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNIN-KGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 403 (965)
|||++|+|+|+.|++.+|.++|.+||+++++|||+|.+++++++.+.++..+.+..+++.++|.|..+... .+...+.+
T Consensus 120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 199 (460)
T PRK06105 120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAF 199 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHH
Confidence 99999999999998888888999999999999999999999998777777777777788888888655432 12233445
Q ss_pred HHHHHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC
Q psy8199 404 ARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 482 (965)
Q Consensus 404 ~~~d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~ 482 (965)
...+++++++++... .++++|||+|| +++++|+++|+++||++|+++|++||+++|+|||||||||+|++|+++++++
T Consensus 200 ~~~~~~~le~~~~~~~~~~iAavIvEP-iqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v 278 (460)
T PRK06105 200 ATRLANELEALILAEGPDTIAAFIGEP-VMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI 278 (460)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC
Confidence 556778888888543 57899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeccccCCCcccceeeeecHHHHHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy8199 483 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 561 (965)
Q Consensus 483 ~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~-~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l 561 (965)
.||++|+||+|+||++|+|++++++++++.+.... ....+.|++||++||++|++++++|++++++++.+++++++++|
T Consensus 279 ~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l 358 (460)
T PRK06105 279 KPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARL 358 (460)
T ss_pred CCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 99999999999999889999999999999886421 11235689999999999999999999999999999999999999
Q ss_pred HHHHHcccCCCceeeeeceeEEEEEEEeecCccch------hhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHH
Q psy8199 562 TKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQ 635 (965)
Q Consensus 562 ~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~------~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~ 635 (965)
+++|+++.++|.+.+|+|.|+|+++++. .+..+. ...+..+...++++||++.+.++++||+||+++++++++
T Consensus 359 ~~~L~~l~~~~~v~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g~~i~l~Ppl~it~~eid 437 (460)
T PRK06105 359 QARLRALADHPLVGEVRGVGLIAAVELV-ADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLIITAAQVD 437 (460)
T ss_pred HHHHHHhhcCCCeEEEEecceEEEEEEe-cCcccCCCCCchhHHHHHHHHHHHHCCeEEEecCCEEEEECCCccCHHHHH
Confidence 9999999778889999999999999996 221111 223456888899999999998889999999999999999
Q ss_pred HHHHhhhcccccHH
Q psy8199 636 HMTSAIFQTFNELD 649 (965)
Q Consensus 636 ~~~~~l~~~~~~~~ 649 (965)
++++++.+++.++.
T Consensus 438 ~~~~~l~~~l~~~~ 451 (460)
T PRK06105 438 EMVDRFGRALDDVA 451 (460)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999988776543
No 18
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-66 Score=588.11 Aligned_cols=398 Identities=29% Similarity=0.480 Sum_probs=350.6
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.....+.+++..+|+++|++.+|...++++|++||||
T Consensus 23 ~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsE 102 (447)
T PRK06917 23 VYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSE 102 (447)
T ss_pred eEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHH
Confidence 99999999999999999999999999999999999999987555444578999999999999999866789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|++.|+|+|+.|++.+|.++|.+|++++++|||+|.+++++++...++..+.++.+++..+|.|.....+.+...+.+..
T Consensus 103 Ave~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 182 (447)
T PRK06917 103 ANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQL 182 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHH
Confidence 99999999999998889999999999999999999999999987766666777766777777776555544455566788
Q ss_pred HHHHHHHHHHHhCC-CcEEEEEEcccccc-CCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 406 CAIFDLEILLKKNH-NKIAAIIIEPLVQC-AGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 406 ~d~~~le~~l~~~~-~~~aaii~ep~v~~-~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
+|++.++++++++. +++||||+|| +++ .+|+++|+++||++|+++|++||+++|+|||+|||||+|++|+++++++.
T Consensus 183 ~~~~~le~~i~~~~~~~iAAvi~EP-i~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~ 261 (447)
T PRK06917 183 ACATELETAIERIGAEHIAAFIAEP-IIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVE 261 (447)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEec-cccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCC
Confidence 89999999998653 5799999999 887 46789999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 563 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~ 563 (965)
||++||||+|+|||+|+|++++++++++.+... ...+.|++||++||++|++++++|++++++++.+++++++++|++
T Consensus 262 PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~--~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 339 (447)
T PRK06917 262 PDIMTLGKGLGAGYTPIAATVVSDRVMEPILRG--SRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIK 339 (447)
T ss_pred CCEEEeeehhccCCcceEEEEEcHHHHHHHhcc--CcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 999999999999977999999999999988642 234678999999999999999999999888999999999999999
Q ss_pred HHHcc-cCCCceeeeeceeEEEEEEEeecCccc------hhhHHHHHHHHHHHcCcEEeec--------CCEEEEeCCcc
Q psy8199 564 ALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKNELLLRPI--------GNTVYLMPPYI 628 (965)
Q Consensus 564 ~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~------~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR~~p~~~ 628 (965)
.|+++ .+++.+.+|+|.|+|+++++. .+... .......+.+.|+++||++.+. ++.+||+||++
T Consensus 340 ~L~~l~~~~~~i~~vrG~Gl~~~ie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~ 418 (447)
T PRK06917 340 GLQKVQQQSTIIGDVRGKGLLIGVEFV-ADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMT 418 (447)
T ss_pred HHHHHHhcCCCEEEEeecceEEEEEEe-ccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCc
Confidence 99998 568888999999999999996 22111 1234567888999999999874 47999999999
Q ss_pred cCHHHHHHHHHhhhccccc
Q psy8199 629 LNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~~~~~ 647 (965)
+|+++++++++++.+++.+
T Consensus 419 it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 419 ITYSELDELLSIFAKSVEE 437 (447)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999877644
No 19
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=3.3e-66 Score=583.15 Aligned_cols=405 Identities=36% Similarity=0.648 Sum_probs=351.6
Q ss_pred cccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHH
Q psy8199 224 LGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKP 298 (965)
Q Consensus 224 l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~ 298 (965)
-.+|+|++...... .|+++ +||||.|||+|||+.+|+|+++|||+||+|++|+++|++++.+.....+.++.
T Consensus 11 ~~~~~~~~~~~~~~---~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~ 87 (428)
T PRK07986 11 RHIWHPYTSMTSPL---PVYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPP 87 (428)
T ss_pred cccccCCcccccCC---CCeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHH
Confidence 34677765543221 22334 99999999999999999999999999999999999999998665544568999
Q ss_pred HHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhc
Q psy8199 299 VIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYT 377 (965)
Q Consensus 299 ~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~ 377 (965)
..+|+++|++.+|.+.++|+|++|||||+|.|+|+||.|++.+| ++|.+||+++++|||.|.+++++++. ..++..+.
T Consensus 88 ~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g-~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 166 (428)
T PRK07986 88 AIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKG-EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYK 166 (428)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC-CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccC
Confidence 99999999999986788999999999999999999999987766 57899999999999999999999874 34556677
Q ss_pred ccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC
Q psy8199 378 SLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI 457 (965)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~ 457 (965)
+..+++.++|.|.... ..++.++|++++++.+++.++++++||+||++++.+|+++|+++||++|+++|++||+
T Consensus 167 ~~~~~~~~~~~p~~~~------~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~ 240 (428)
T PRK07986 167 GYLPENLFAPAPQSRF------DGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGI 240 (428)
T ss_pred CCCCCCEEECCCCccc------chhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC
Confidence 7777777888775322 1246678999999999866778999999993399999999999999999999999999
Q ss_pred eEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHH
Q psy8199 458 HLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCA 537 (965)
Q Consensus 458 llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aa 537 (965)
++|+|||+|||||+|++|+++++|+.||++||||+|+||++|+|++++++++++.+... ....+.|++||++||++|++
T Consensus 241 lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~-~~~~~~~~~T~~g~p~~~aa 319 (428)
T PRK07986 241 LLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNG-EAGCFMHGPTFMGNPLACAV 319 (428)
T ss_pred EEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcC-CCCccccCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999988652 12346689999999999999
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec
Q psy8199 538 ALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 617 (965)
Q Consensus 538 a~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 617 (965)
++++|++++++++.+++++++++|++.|+++.+++.+.+|||.|+|+++++. +. ..+..+.+.|+++|+++.+.
T Consensus 320 a~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~--~~----~~~~~~~~~l~~~Gl~~~~~ 393 (428)
T PRK07986 320 ANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETT--RP----VNMAALQRFFVEQGVWIRPF 393 (428)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeC--Cc----ccHHHHHHHHHHCCcEEEec
Confidence 9999999998899999999999999999998778889999999999999986 21 11346788999999999998
Q ss_pred CCEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 618 GNTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 618 ~~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
++++||.||+++++++++++++++.+++
T Consensus 394 g~~i~~~Ppl~it~~ei~~~~~~l~~~l 421 (428)
T PRK07986 394 GKLIYLMPPYIILPEQLQRLTAAVNRAV 421 (428)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999999988765
No 20
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-66 Score=587.60 Aligned_cols=409 Identities=26% Similarity=0.373 Sum_probs=347.6
Q ss_pred cccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHH
Q psy8199 224 LGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKP 298 (965)
Q Consensus 224 l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~ 298 (965)
-.++|++...... .|+.+ +||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.+. .+.+++
T Consensus 22 ~~~~~~~~~~~~~----~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-~~~~~~ 96 (451)
T PRK06062 22 AHVFHSWSAQGKI----NPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP-AHANDA 96 (451)
T ss_pred hhccccccccccC----CCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC-ccCCHH
Confidence 3456665433211 45545 9999999999999999999999999999999999999999876543 678999
Q ss_pred HHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcc
Q psy8199 299 VIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTS 378 (965)
Q Consensus 299 ~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~ 378 (965)
..+|+++|+++.|.+.++|+|++|||||++.|+|+||.| ++|.+||+++++|||++.+++++++.+.+... .+
T Consensus 97 ~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~-~~ 169 (451)
T PRK06062 97 RSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLH------TGRPKVLSAYRSYHGGTGSAINLTGDPRRWPN-DT 169 (451)
T ss_pred HHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHh------hCCceEEEEeCCCCCCCHHHHhhcCCcccccC-CC
Confidence 999999999999866899999999999999999999998 58999999999999999999999986543322 45
Q ss_pred cCCCeeEecCCCCCCCCCC-CChhHHHHHHHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy8199 379 LLNKTYIITTPDSRNINKG-NSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 456 (965)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 456 (965)
..+++..++.|..+..++. .+..++...++++|+++++.. ++++++||+|| +++++|.++||++||++|+++|++||
T Consensus 170 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEP-v~g~gG~~~p~~~yl~~lr~lc~~~g 248 (451)
T PRK06062 170 GRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLES-VPGTAGILVPPPGYLAGVRELCDRHG 248 (451)
T ss_pred CCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 5566777777665543321 122344456789999999654 46899999999 99999999999999999999999999
Q ss_pred CeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHH
Q psy8199 457 IHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACC 536 (965)
Q Consensus 457 ~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~a 536 (965)
++||+|||+|||||+|.+|+++++|+.||++||||+|+|||+|+|++++++++++.+.. ..+.|++||++||++|+
T Consensus 249 ~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~----~~~~~~~T~~gnpl~~A 324 (451)
T PRK06062 249 IVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFAD----RPYPGGLTYSGHPLACA 324 (451)
T ss_pred CEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc----CCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999998899999999999998853 23568899999999999
Q ss_pred HHHHHHHHHhcccHHHHHHHHH-HHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccch---------hhHHHHHHH
Q psy8199 537 AALATLEIFNKDNILQRISQDM-KKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI---------ETFSKKFFV 605 (965)
Q Consensus 537 aa~a~L~~~~~~~~~~~~~~~~-~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~---------~~~~~~~~~ 605 (965)
+|+++|++++++++.+++++++ ++|+++|+++ .+++.+.+++|.|+|+++++. .+.... ......+.+
T Consensus 325 aa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~-~~~~~~~~~~~~~~~~~~~~~~~~ 403 (451)
T PRK06062 325 AAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELV-ADRETREPLAPYGASSAAMAAVKA 403 (451)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEc-ccccccCCCcccchhhHHHHHHHH
Confidence 9999999999889999999999 6999999998 567888899999999999996 221100 113557888
Q ss_pred HHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhcccccHHH
Q psy8199 606 AALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNELDE 650 (965)
Q Consensus 606 ~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~~e 650 (965)
.|+++||++.+.++.+||+||+++++++++++++++.+++..+++
T Consensus 404 ~l~~~Gvl~~~~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 404 ACKERGLLPFVNGNRIHVVPPCTVTEDEVREGLAILDAALAVADA 448 (451)
T ss_pred HHHHCCcEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 999999999887789999999999999999999999887765544
No 21
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.1e-66 Score=582.00 Aligned_cols=387 Identities=34% Similarity=0.634 Sum_probs=345.9
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.....+.++...+|+++|++.+|.+.++|+|++||||
T Consensus 36 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGse 115 (429)
T PRK06173 36 VMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSV 115 (429)
T ss_pred eEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchH
Confidence 99999999999999999999999999999999999999998766555678999999999999999877899999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
|||.|+|+||.|++.+|+++|.+||+++++|||.|.+++++++. ..++..+.+..+...++|.|.... ...+.
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~~~~ 189 (429)
T PRK06173 116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKF------GEEWN 189 (429)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCccc------chhHH
Confidence 99999999999988888889999999999999999999999874 446666777777777888775321 13455
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
..++++|++.+..+++++||||+|| + |+++|.++||++|+++|+++|++||+++|+|||||||||+|++|+++++|+.
T Consensus 190 ~~~l~~l~~~i~~~~~~iAAvi~EP-i~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~ 268 (429)
T PRK06173 190 DEAIEPLQDLLEQKGDEIAALILEP-VVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVV 268 (429)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEcc-hhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCC
Confidence 6689999999976677899999999 6 9999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 563 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~ 563 (965)
||++||||+++||++|+|++++++++++.+.. +....+.|++||++||++|++++++|++++++++.+++++++++|++
T Consensus 269 PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~-~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~ 347 (429)
T PRK06173 269 PDIMCIGKALTGGYLTLSATITTEAIAQTICS-GEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQ 347 (429)
T ss_pred CCEEEeehhhhCCccccceEEecHHHHHHHhc-CCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999998899999999999998864 22335779999999999999999999999988899999999999999
Q ss_pred HHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 564 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 564 ~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+|+++.+++.+.+||+.|+|+++++. +. ..+..+.+.|+++||++.+.++++||.||+++++++++++++++.+
T Consensus 348 ~L~~~~~~~~v~~vRg~Gl~~~iel~--~~----~~~~~i~~~l~e~Gi~v~~~g~~l~~~Ppl~it~~ei~~~~~~l~~ 421 (429)
T PRK06173 348 ELAPAAEFDSVAEVRVLGAIGVVEMK--EP----VNMATLQPRFVEHGIWVRPFGKLVYIMPPFIISPDELSQLTSGLLR 421 (429)
T ss_pred HHHHhhcCCCeeeeeccceEEEEEeC--Cc----ccHHHHHHHHHHCCeEEEecCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 99887667888899999999999996 21 1134678899999999999889999999999999999999999987
Q ss_pred ccc
Q psy8199 644 TFN 646 (965)
Q Consensus 644 ~~~ 646 (965)
++.
T Consensus 422 ~l~ 424 (429)
T PRK06173 422 VLK 424 (429)
T ss_pred HHH
Confidence 664
No 22
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.4e-65 Score=582.64 Aligned_cols=417 Identities=27% Similarity=0.447 Sum_probs=356.0
Q ss_pred cccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHH
Q psy8199 226 LIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVI 300 (965)
Q Consensus 226 f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~ 300 (965)
+|||++...... +.|..+ +||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.+...+.++...
T Consensus 18 ~~~~~~~~~~~~--~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~ 95 (445)
T PRK09221 18 HWMPFTANRQFK--AAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAF 95 (445)
T ss_pred cccCcccccccC--CCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHH
Confidence 566665443221 134544 9999999999999999999999999999999999999999876655567899999
Q ss_pred HHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccC
Q psy8199 301 KLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLL 380 (965)
Q Consensus 301 ~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~ 380 (965)
+|+++|++.+|.+.++|+|++|||||+|.|+|+||.|++.+|.++|.+||+++++|||+|.+++++++.+.++..|.+..
T Consensus 96 ~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~ 175 (445)
T PRK09221 96 ELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLL 175 (445)
T ss_pred HHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCC
Confidence 99999999998678899999999999999999999998877877889999999999999999999999877777777777
Q ss_pred CCeeEecCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCe
Q psy8199 381 NKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIH 458 (965)
Q Consensus 381 ~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~l 458 (965)
+++.++|.|. ......+.....+...++++++++++.. .+++++||+|| +++++|.+.|+++||++|+++|++||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Ep-v~g~~G~~~~~~~yl~~l~~lc~~~g~l 254 (445)
T PRK09221 176 PGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEP-MAGSAGVLVPPKGYLQRLREICDKHGIL 254 (445)
T ss_pred CCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEec-ccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 7777887764 3332223333444555678888888765 37899999999 9999999999999999999999999999
Q ss_pred EEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccC-CcccccccCCCCCCHHHHHH
Q psy8199 459 LIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACCA 537 (965)
Q Consensus 459 lI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~-~~~~~~~~~t~~~~~~~~aa 537 (965)
+|+|||+|||||+|++|+++++++.||++|+||+++||++|+|++++++++++.+..+. ....+.|++||++||++|++
T Consensus 255 lI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aa 334 (445)
T PRK09221 255 LIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAA 334 (445)
T ss_pred EEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999886421 11135688999999999999
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec
Q psy8199 538 ALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 617 (965)
Q Consensus 538 a~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 617 (965)
++++|++++++++.+++++++++|+++|+++.+++.+.++||.|+|.++++..... .....+..+.+.|+++||++.+.
T Consensus 335 a~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~-~~~~~~~~~~~~~~~~Gv~~~~~ 413 (445)
T PRK09221 335 GLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPG-APGARGYEAFMKCFEKGLLVRYT 413 (445)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccc-cccchHHHHHHHHHHCCeEEeec
Confidence 99999999888999999999999999999987788889999999999999962111 11122446778899999999988
Q ss_pred CCEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 618 GNTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 618 ~~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
++.+||+||+++++++++++++++.+++.
T Consensus 414 ~~~lr~~Ppl~~t~~eid~~~~~l~~~l~ 442 (445)
T PRK09221 414 GDTIALSPPLIIEKAQIDELVDALGDALR 442 (445)
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999887654
No 23
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.4e-65 Score=585.32 Aligned_cols=419 Identities=27% Similarity=0.427 Sum_probs=353.2
Q ss_pred cccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccC-CCCcH
Q psy8199 224 LGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLS-NLTHK 297 (965)
Q Consensus 224 l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~-~~~~~ 297 (965)
-..|||++...... -..|+++ +||||.|||+||||.+|+|+.+|||+||+|++|+++|++++.+.+.. .+.++
T Consensus 20 ~~~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~ 98 (460)
T PRK12403 20 AHHIHAFLDQKALN-AEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHP 98 (460)
T ss_pred cccccccccccccc-cCCCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCH
Confidence 34677776542210 0135555 99999999999999999999999999999999999999997655432 46789
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhc
Q psy8199 298 PVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 377 (965)
Q Consensus 298 ~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~ 377 (965)
...+|+++|++.+|.+.++++|++||||||++|+|+||.|+..+|++++.+|+.+.++|||++.+++++++...++. +.
T Consensus 99 ~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~-~~ 177 (460)
T PRK12403 99 AVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE-MG 177 (460)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc-cC
Confidence 99999999999998667899999999999999999999998777877788899999999999999999998765554 35
Q ss_pred ccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHh-CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy8199 378 SLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKK-NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 456 (965)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 456 (965)
+..+++.++|.|..++.+++.....+...++++|++.+.+ ..+++++||+|| +++++|.+.|+++||++|+++|++||
T Consensus 178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Ep-v~g~gG~~~~~~~yl~~lr~lc~~~g 256 (460)
T PRK12403 178 GLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEP-FQGAGGMIFPPESYWPEIQRICRQYD 256 (460)
T ss_pred CCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 5667788888876655443334445555567788776643 346899999999 99999999999999999999999999
Q ss_pred CeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHH
Q psy8199 457 IHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACC 536 (965)
Q Consensus 457 ~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~a 536 (965)
++||+|||+|||||+|++|+++++|+.||++|+||+|+|||+|+|++++++++++.+... ...+.|++||++||++|+
T Consensus 257 ~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~--~~~~~~~~T~~gnPl~~A 334 (460)
T PRK12403 257 VLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQ--GGVFAHGLTYSGHPVAAA 334 (460)
T ss_pred CEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcC--CCccccCCCCCCCHHHHH
Confidence 999999999999999999999999999999999999999988999999999999988642 234668999999999999
Q ss_pred HHHHHHHHHhcccHHHHHH-HHHHHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccch------hhHHHHHHHHHH
Q psy8199 537 AALATLEIFNKDNILQRIS-QDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAAL 608 (965)
Q Consensus 537 aa~a~L~~~~~~~~~~~~~-~~~~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~------~~~~~~~~~~l~ 608 (965)
+++++|++++++++.++++ +++++|++.|+++ .+++.+.+|||.|+|+++++. .+..+. ......+...++
T Consensus 335 aala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~~~~~~~~~~ 413 (460)
T PRK12403 335 VAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFA-EDKATRKRFANENDLAWRCRTIGF 413 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEc-cCccccccccchhHHHHHHHHHHH
Confidence 9999999999888999996 9999999999887 678889999999999999996 221111 122334667789
Q ss_pred HcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhcccccH
Q psy8199 609 KNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEL 648 (965)
Q Consensus 609 ~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~ 648 (965)
++|+++.+.++.+||+||+++|+++++++++.+.+++.++
T Consensus 414 ~~Gll~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 414 EEGVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred hCCEEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999877889999999999999999999998877543
No 24
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.9e-65 Score=581.23 Aligned_cols=398 Identities=27% Similarity=0.467 Sum_probs=346.2
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+||||.+|+|+.+|||+||+|++|+++|++++.+.+...+.++...+++++|++.+|.+.++|+|++||||
T Consensus 38 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGse 117 (442)
T PRK13360 38 MYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSE 117 (442)
T ss_pred eEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 99999999999999999999999999999999999999987665555678999999999999999867889999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 404 (965)
|+|.|+|+||.|++.+|.++|.+||++.++|||+|.+++++++...++..+.++.+++.++|.+.. .+.+.+.....+.
T Consensus 118 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 197 (442)
T PRK13360 118 SVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHG 197 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHH
Confidence 999999999999777776678999999999999999999999987777777777777778887642 2222223333455
Q ss_pred HHHHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 405 RCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 405 ~~d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
..++++|+++++.. ++++++||+|| +++++|.+.|+++||++|+++|++||+++|+|||||||||+|++|+++++|+.
T Consensus 198 ~~~~~~le~~l~~~~~~~~aavivEp-i~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~ 276 (442)
T PRK13360 198 AELADELERLVTLHDASTIAAVIVEP-VAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVT 276 (442)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCC
Confidence 55788899888754 47899999999 99999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCC-cccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNN-INIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~-~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
||++||||+|+||++|+|++++++++++.+..+.. ...+.|++||++||++|++++++|++++++++.+++++++++|+
T Consensus 277 PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~ 356 (442)
T PRK13360 277 PDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWE 356 (442)
T ss_pred CceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999998899999999999998864211 11256889999999999999999999998899999999999999
Q ss_pred HHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 563 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
+.|+++.+++.+.+++|.|+++++++...... ....+..+...|+++||++.+.++.+||+||+++|+++++++++++.
T Consensus 357 ~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~-~~~~~~~~~~~l~~~Gvl~~~~~~~lr~~Ppl~~t~~eid~~~~~l~ 435 (442)
T PRK13360 357 DALHSLRDAPHVIDIRNLGLVGAVELAPRDGK-PGKRAYEVFLKCFEKGLMIRYTGDILALSPPLIIEEAQIDELFDILA 435 (442)
T ss_pred HHHHHhhcCCCeeeeeccceEEEEEEecCCCC-cchhHHHHHHHHHHCCcEEEecCCEEEEeCCCccCHHHHHHHHHHHH
Confidence 99998866788889999999999998621111 12234567788999999999888899999999999999999999987
Q ss_pred ccc
Q psy8199 643 QTF 645 (965)
Q Consensus 643 ~~~ 645 (965)
+++
T Consensus 436 ~~l 438 (442)
T PRK13360 436 QAL 438 (442)
T ss_pred HHH
Confidence 665
No 25
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-65 Score=582.18 Aligned_cols=418 Identities=28% Similarity=0.485 Sum_probs=361.2
Q ss_pred ccccccccCccccccccc-CCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCc
Q psy8199 223 KLGLIHPKNNLKLKWRIN-LPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTH 296 (965)
Q Consensus 223 ~l~f~~p~~~~~~~~~~~-~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~ 296 (965)
+-.+|||++...... . .|.++ +||||.|||+|||+.+|+|+++|||+||+|++|+++|++++.+.+...+.+
T Consensus 17 ~~~~~~~~~~~~~~~--~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~ 94 (460)
T PRK06541 17 KRHLWMHFTRHGAYI--DAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAH 94 (460)
T ss_pred hcccccCccCccccc--cCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCC
Confidence 456789987764331 1 24444 999999999999999999999999999999999999999987665556889
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchh
Q psy8199 297 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 376 (965)
Q Consensus 297 ~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~ 376 (965)
+...+++++|++..|.+.++|+|++|||||+|.|+|+||.|++.+|.++|.+||+++++|||+|.+++++++.+.++..+
T Consensus 95 ~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~ 174 (460)
T PRK06541 95 PPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPF 174 (460)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhcccc
Confidence 99999999999998866889999999999999999999999887788889999999999999999999999877777777
Q ss_pred cccCCCeeEecCCCCCCCC-CCCChhHHHHHHHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHh
Q psy8199 377 TSLLNKTYIITTPDSRNIN-KGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN 454 (965)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~ 454 (965)
.+..+++.++|.|+.++.+ .+.+...+...+++.+++++++. ++++++||+|| +++++|.+++|++||++|+++|++
T Consensus 175 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EP-v~g~~G~~~~~~~yl~~l~~lc~~ 253 (460)
T PRK06541 175 EPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEP-VQNAGGCFPPPPGYFERVREICDR 253 (460)
T ss_pred CCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC-ccCCCCCccCCHHHHHHHHHHHHH
Confidence 8888888888888766544 33334456666788999998753 56899999999 999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHH
Q psy8199 455 YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLA 534 (965)
Q Consensus 455 ~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~ 534 (965)
||+++|+|||||||||+|++|+++++|+.||++||||+++||++|+|++++++++++.+... ...+.|++||++||++
T Consensus 254 ~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~--~~~~~~~~T~~gnp~~ 331 (460)
T PRK06541 254 YDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDG--PTMFLHGYTFGGHPVS 331 (460)
T ss_pred cCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcC--CCccccCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999967999999999999988642 1456788999999999
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccch-----h---h-HHHHHHH
Q psy8199 535 CCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI-----E---T-FSKKFFV 605 (965)
Q Consensus 535 ~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~-----~---~-~~~~~~~ 605 (965)
|++++++|++++++++.+++++++++|+++|+++.++|.+..++|.|+|+++++. .+..+. . . ....+..
T Consensus 332 ~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~-~~~~~~~~~~~~~~~~~~~~~~~~ 410 (460)
T PRK06541 332 AAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELV-KDKATKETFTDDESERLLRGFLSP 410 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEe-cCcccccCCcchhhhhhHHHHHHH
Confidence 9999999999988899999999999999999998668888899999999999996 221110 0 1 1135778
Q ss_pred HHHHcCcEEeec--C-CEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 606 AALKNELLLRPI--G-NTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 606 ~l~~~Gi~~~~~--~-~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
.|+++||++.+. + +.+||+||+++++++++++++++.+++.
T Consensus 411 ~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~ 454 (460)
T PRK06541 411 ALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLT 454 (460)
T ss_pred HHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 899999999873 3 6899999999999999999999887654
No 26
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=3.3e-65 Score=574.69 Aligned_cols=367 Identities=30% Similarity=0.526 Sum_probs=327.7
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.+ ..+.++...+++++|++.+|.+.++|+|++||||
T Consensus 67 ~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~-~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsE 145 (442)
T TIGR03372 67 NTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS-QELLDPLRALLAKTLAALTPGKLKYSFFCNSGTE 145 (442)
T ss_pred eEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc-cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchH
Confidence 899999999999999999999999999999999999999876543 3466899999999999999866789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||+.|+|+||.|+.. +++.+||+++++|||+|.+++++++.+.++..+.++.+++.++|+|
T Consensus 146 A~e~AlklAr~~t~~---~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~---------------- 206 (442)
T TIGR03372 146 SVEAALKLAKAYQSP---RGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG---------------- 206 (442)
T ss_pred HHHHHHHHHHHHHhh---cCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC----------------
Confidence 999999999998643 3578899999999999999999999877777788888888888875
Q ss_pred HHHHHHHHHHHh---CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC
Q psy8199 406 CAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 482 (965)
Q Consensus 406 ~d~~~le~~l~~---~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~ 482 (965)
|++++++.+++ +++++++||+|| +++++|.++||++||++++++|++||+++|+|||||||||+|++|+++++|+
T Consensus 207 -d~~~~~~~l~~~~~~~~~vAavIvEp-v~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv 284 (442)
T TIGR03372 207 -DIEAMLKALNECKKTGDDVAAIILEP-IQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV 284 (442)
T ss_pred -CHHHHHHHHHHHhcCCCcEEEEEEeC-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC
Confidence 44555555542 357899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 483 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 483 ~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
.||++|+||+|+||++|+|++++++++++.+.. .++.|++||+|||++|++++++|++++++++.+++++++++|+
T Consensus 285 ~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~----~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~ 360 (442)
T TIGR03372 285 QPDILCLAKALGGGVMPIGATIATEAVFSVLFD----NPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLL 360 (442)
T ss_pred CCCeeeehhhhcCCcccceEEEecHHHHHhhhc----cCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 999999999999998899999999999988843 2467899999999999999999999998999999999999999
Q ss_pred HHHHcc-cCCC-ceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec---CCEEEEeCCcccCHHHHHHH
Q psy8199 563 KALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHM 637 (965)
Q Consensus 563 ~~L~~l-~~~~-~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~~~~t~~~i~~~ 637 (965)
++|+++ .++| .+.+|||.|+|+++++. .+ .....+.+.|+++||++.+. ++++||.||+++++++++++
T Consensus 361 ~~L~~l~~~~~~~i~~vRG~Gl~~giel~-~~-----~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~ 434 (442)
T TIGR03372 361 DGFQQLAAEYPDLIIEARGKGLLMAIEFR-DN-----EIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALV 434 (442)
T ss_pred HHHHHHHHhCCCceEEEecceEEEEEEeC-Ch-----HHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHH
Confidence 999998 5677 67899999999999996 22 23456889999999999753 47999999999999999999
Q ss_pred HHhhhcc
Q psy8199 638 TSAIFQT 644 (965)
Q Consensus 638 ~~~l~~~ 644 (965)
+++++++
T Consensus 435 ~~~l~~~ 441 (442)
T TIGR03372 435 IKAAKDA 441 (442)
T ss_pred HHHHHHh
Confidence 9988764
No 27
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-65 Score=579.76 Aligned_cols=385 Identities=25% Similarity=0.363 Sum_probs=333.5
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCC---CeEEEc-C
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL---GHCFYG-S 321 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~---~~v~~~-~ 321 (965)
+||||.|||+|||+.+|+|++++||+||+|++|+++|+++..+.+...+.++...+|+++|.+.+|.++ ++++|+ +
T Consensus 55 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~ 134 (464)
T PRK06938 55 IYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGP 134 (464)
T ss_pred cEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCC
Confidence 999999999999999999999999999999999999997643333335789999999999999987544 377675 8
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChh
Q psy8199 322 DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN 401 (965)
Q Consensus 322 sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (965)
|||||++.|+|+||.+ ++|.+||+++++|||+|.+++++++...++..+.+..+++.++|+|..++.+.+...+
T Consensus 135 SGSEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 208 (464)
T PRK06938 135 TGTDAVEAALKLVKTA------TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGE 208 (464)
T ss_pred CcHHHHHHHHHHHHHh------hCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchh
Confidence 9999999999999998 6899999999999999999999998776666777777778888888665554443344
Q ss_pred HHHHHHHHHHHHHHHhC---CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccc
Q psy8199 402 EIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE 478 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~---~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 478 (965)
.+...+++.+++++++. .+++||||+|| +++++|+++||++||++|+++|++||+++|+|||+|||||+|++|+++
T Consensus 209 ~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EP-iqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e 287 (464)
T PRK06938 209 AGVRANLHYLENLLDDPESGVVLPAAVILEV-VQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFE 287 (464)
T ss_pred hHHHHHHHHHHHHHHhhccCCCceEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHH
Confidence 55567889999999753 24799999999 999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHH
Q psy8199 479 HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDM 558 (965)
Q Consensus 479 ~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~ 558 (965)
++|+.||++|+||+|+|| +|+|++++++++ +.+.. ..|++||+|||++|++|+++|++++++++.+++++++
T Consensus 288 ~~gv~PDiv~~gKglggG-~PlsAv~~~~~~-~~~~~------~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G 359 (464)
T PRK06938 288 HAGIIPDVVVLSKAIGGS-LPLAVVVYREWL-DTWQP------GAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMG 359 (464)
T ss_pred hcCCCCCEEEeeccccCC-CceEEEeehhHh-hccCC------CCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 999999999999999999 799999999885 65532 3589999999999999999999999999999999999
Q ss_pred HHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccc---------hhhHHHHHHHHHHHcCcEEeec---CCEEEEeC
Q psy8199 559 KKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---------IETFSKKFFVAALKNELLLRPI---GNTVYLMP 625 (965)
Q Consensus 559 ~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~---------~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p 625 (965)
++|+++|+++ .++|.+.+|||.|+|+++++. .+..+ .......+...|+++|+++.+. ++++||.|
T Consensus 360 ~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~P 438 (464)
T PRK06938 360 ERLREHLRQLQRDYPQLGDVRGRGLMLGVEIV-DPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLP 438 (464)
T ss_pred HHHHHHHHHHHHhCCCeeeeeccceEEEEEec-cCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEEC
Confidence 9999999998 568889999999999999996 22111 1234556888899999999874 47999999
Q ss_pred CcccCHHHHHHHHHhhhcccc
Q psy8199 626 PYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 626 ~~~~t~~~i~~~~~~l~~~~~ 646 (965)
|+++|+++++++++++.+++.
T Consensus 439 pl~it~~eid~~~~~l~~~l~ 459 (464)
T PRK06938 439 PLIITAEQIDEVAEIFAEAVA 459 (464)
T ss_pred CCccCHHHHHHHHHHHHHHHH
Confidence 999999999999999887654
No 28
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.4e-64 Score=570.62 Aligned_cols=387 Identities=34% Similarity=0.591 Sum_probs=337.2
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.....+.++...+|+++|++..|.+.++|+|++||||
T Consensus 32 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGse 111 (422)
T PRK05630 32 VFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSV 111 (422)
T ss_pred eEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHH
Confidence 99999999999999999999999999999999999999998766544578999999999999999867899999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
|+|.|+|+||+|+..+|.++|.+||+++++|||.|.+++++++. ..++..+.+..++..++|.|..... +.+ ..
T Consensus 112 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~----~~~-~~ 186 (422)
T PRK05630 112 SVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGS----SPQ-EI 186 (422)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCC----ChH-HH
Confidence 99999999999988888888999999999999999999999874 4456666776677778877643211 111 11
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCc
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 484 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 484 (965)
...++++++++. +++||||+||++++.+|+++|+++|+++|+++|++||+++|+|||+|||||+|++|+++++|+.|
T Consensus 187 ~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~P 263 (422)
T PRK05630 187 SEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTP 263 (422)
T ss_pred HHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCC
Confidence 234566777664 57999999993399999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Q psy8199 485 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 564 (965)
Q Consensus 485 Divt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~ 564 (965)
|++||||+|+|||+|+|++++++++++.+........+.|++||++||++|++++++|++++++++.+++++++++|++.
T Consensus 264 Di~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~ 343 (422)
T PRK05630 264 DIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAG 343 (422)
T ss_pred CeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 99999999999988999999999999988542112346799999999999999999999999889999999999999999
Q ss_pred HHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 565 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 565 L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
|+.+.++|.+.+|||.|+|+++++. +. ..+..+.+.|+++|+++.+.++++||.||++++++++++++++++++
T Consensus 344 L~~l~~~~~v~~vRg~Gl~~~ie~~--~~----~~~~~~~~~~~~~Gl~~~~~g~~l~~~PpL~it~~~i~~~~~~l~~a 417 (422)
T PRK05630 344 LSPLAHLPGVADVRVLGAIGVVEME--QP----VDMEEATQAAVDHGVWLRPFGRLVYVMPPYITTSEQIAQICAALAAA 417 (422)
T ss_pred HHHhhcCCCeeeeeccccEEEEEEC--Cc----ccHHHHHHHHHHCCeEEEecCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 9888678889999999999999996 21 11346778899999999988899999999999999999999998876
Q ss_pred cc
Q psy8199 645 FN 646 (965)
Q Consensus 645 ~~ 646 (965)
+.
T Consensus 418 l~ 419 (422)
T PRK05630 418 VK 419 (422)
T ss_pred Hh
Confidence 54
No 29
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-64 Score=573.10 Aligned_cols=372 Identities=30% Similarity=0.550 Sum_probs=331.0
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.+ ..+.++...+|+++|++.+|.+.++|+|++||||
T Consensus 74 ~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~-~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsE 152 (459)
T PRK11522 74 NTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS-QELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTE 152 (459)
T ss_pred EEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc-cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchH
Confidence 899999999999999999999999999999999999999876554 3567999999999999999877889999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||+.|+|+||.|+.. .+|.+||+++++|||+|.+++++++...++..+.+..+++.++|++
T Consensus 153 Ave~AlklAr~~t~~---~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~---------------- 213 (459)
T PRK11522 153 SVEAALKLAKAYQSP---RGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFG---------------- 213 (459)
T ss_pred HHHHHHHHHHHHhcc---CCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCC----------------
Confidence 999999999998532 2377899999999999999999999877777777777777776664
Q ss_pred HHHHHHHHHHHh---CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC
Q psy8199 406 CAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 482 (965)
Q Consensus 406 ~d~~~le~~l~~---~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~ 482 (965)
|++++++++++ .++++++||+|| +++++|.++||++||++++++|++||+++|+|||||||||+|++|+++++|+
T Consensus 214 -d~~~l~~~l~~~~~~~~~iAavIvEp-v~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv 291 (459)
T PRK11522 214 -NIEAMRTALSECKKTGDDVAAVILEP-IQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENV 291 (459)
T ss_pred -CHHHHHHHHHHhhccCCcEEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCC
Confidence 56677777753 346799999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 483 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 483 ~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
.||++||||+|+||++|+|++++++++++.+.. .++.|++||+|||++|++|+++|++++++++.+++++++++|+
T Consensus 292 ~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~----~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~ 367 (459)
T PRK11522 292 QPDILCLAKALGGGVMPIGATIATEEVFSVLFD----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLL 367 (459)
T ss_pred CCCEEEechhhhCCCccceeEEEcHHHHHHhcc----CCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 999999999999998899999999999987753 2467999999999999999999999998899999999999999
Q ss_pred HHHHcc-cCCC-ceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec---CCEEEEeCCcccCHHHHHHH
Q psy8199 563 KALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHM 637 (965)
Q Consensus 563 ~~L~~l-~~~~-~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~~~~t~~~i~~~ 637 (965)
++|+++ .++| .+.+|+|.|+|+++++. + ...+..+.+.|+++||++.+. ++++||.||+++++++++++
T Consensus 368 ~~L~~l~~~~~~~i~~VrG~Gl~~giel~--~----~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~ 441 (459)
T PRK11522 368 DGFRQLAREYPDLVQEARGKGMLMAIEFV--D----NEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQV 441 (459)
T ss_pred HHHHHHHHhCCCceeeEEeceeEEEEEec--C----chHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHH
Confidence 999998 4677 67899999999999996 2 123456888999999999764 47999999999999999999
Q ss_pred HHhhhcccccHH
Q psy8199 638 TSAIFQTFNELD 649 (965)
Q Consensus 638 ~~~l~~~~~~~~ 649 (965)
++++.+++..+.
T Consensus 442 l~~l~~~l~~~~ 453 (459)
T PRK11522 442 LKAARKALAAMR 453 (459)
T ss_pred HHHHHHHHHHHH
Confidence 999987765443
No 30
>KOG1402|consensus
Probab=100.00 E-value=1.2e-64 Score=503.65 Aligned_cols=369 Identities=30% Similarity=0.486 Sum_probs=328.0
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+++||..|++|+||.+++++++-||+||.|++|+++|.++++..+ ..+.+....++++.+..++ +.+.|+-+|+|.|
T Consensus 51 ~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlss-rafYnd~~~~f~~~vt~lf--~~~kvlpmnTGaE 127 (427)
T KOG1402|consen 51 SRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSS-RAFYNDVLGEFAEYVTKLF--GYDKVLPMNTGAE 127 (427)
T ss_pred cEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhh-HHHhhhhHHHHHHHHHHhc--Ccceeeecccchh
Confidence 999999999999999999999999999999999999999875443 3466788899999999999 5899999999999
Q ss_pred HHHHHHHHHHHHHH-hcCCC-CceEEEEEcCCccCCccccccccCCcCccchhcccCCC-eeEecCCCCCCCCCCCChhH
Q psy8199 326 AVEVALKMSFHYWY-NKGFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNK-TYIITTPDSRNINKGNSANE 402 (965)
Q Consensus 326 A~~~Al~~a~~~~~-~~g~~-~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 402 (965)
|+|.|+|+||.|.. .++.+ .+.+|++..++|||.|.++.++++.+.-...|.|+.++ +..+|+
T Consensus 128 a~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------------- 193 (427)
T KOG1402|consen 128 AVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------------- 193 (427)
T ss_pred HHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc--------------
Confidence 99999999998743 33434 56779999999999999999999987555667777777 555555
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC
Q psy8199 403 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 482 (965)
Q Consensus 403 ~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~ 482 (965)
+|+++|+.+++ .+.++++++|| ||+++|+++||++||+++++||++|++++|+||||||+||||+++++++.++
T Consensus 194 ---~d~eale~~l~--~~~vaaFivEP-IQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env 267 (427)
T KOG1402|consen 194 ---GDAEALEVALK--SPNVAAFIVEP-IQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENV 267 (427)
T ss_pred ---CCHHHHHHHhc--CCCeeEEEeec-cccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhc
Confidence 68999999998 47899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 483 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 483 ~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
+||++.|+|+++||.+|++++++++++|..+.. ..|++||+|||++|++|.|+|+++.++++.++.+.+|..|+
T Consensus 268 ~PDivilgKalSGG~~Pvsavl~~~~im~~~~p------geHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~ 341 (427)
T KOG1402|consen 268 RPDIVILGKALSGGVYPVSAVLADDDIMLNIKP------GEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILR 341 (427)
T ss_pred CCCeEEEeccccCCeeeeEEEEecHHHHhccCC------CccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988765 45999999999999999999999999999999999999999
Q ss_pred HHHHcc-cCCCc-eeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-CCEEEEeCCcccCHHHHHHHHH
Q psy8199 563 KALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTS 639 (965)
Q Consensus 563 ~~L~~l-~~~~~-i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~lR~~p~~~~t~~~i~~~~~ 639 (965)
.+|..+ .+.|. +..|||+|++.++++.. . ..+...+..++-.|.++|++.-|. ++.+||+||+.++++++++.++
T Consensus 342 ~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~-~-~~~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e 419 (427)
T KOG1402|consen 342 DQLNKLQKKFPHVVKEVRGRGLLNAIVINP-S-KTSGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIE 419 (427)
T ss_pred HHHHhccccccchhheeeccceEEEEEecc-c-cccchhHHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHHHH
Confidence 999999 55665 56999999999999872 1 122334567788899999999885 4799999999999999999999
Q ss_pred hhhccc
Q psy8199 640 AIFQTF 645 (965)
Q Consensus 640 ~l~~~~ 645 (965)
.+.+.+
T Consensus 420 ~i~k~i 425 (427)
T KOG1402|consen 420 AIEKTI 425 (427)
T ss_pred HHHHHh
Confidence 887654
No 31
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-64 Score=569.41 Aligned_cols=386 Identities=28% Similarity=0.404 Sum_probs=327.3
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCC---CeEEEcCC
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL---GHCFYGSD 322 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~---~~v~~~~s 322 (965)
+||||.|||+||||.+|+|+.++||+||+|++|+++|+++..+.+...++++...+++++|++.+|... ..++|++|
T Consensus 50 ~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~S 129 (459)
T PRK06931 50 VWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPS 129 (459)
T ss_pred cEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCC
Confidence 999999999999999999999999999999999999998743332235678999999999999987432 24567799
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhH
Q psy8199 323 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 402 (965)
Q Consensus 323 GseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (965)
||||++.|+|+||.| ++|.+||+++++|||++.+++++++...++..+.++.+++.++|.|+.++.+.+...+.
T Consensus 130 GsEAve~AlklAr~~------tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (459)
T PRK06931 130 GADAVEAAIKLAKTY------TGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEA 203 (459)
T ss_pred cHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchh
Confidence 999999999999998 58999999999999999999999987777777777788888999887666554322222
Q ss_pred HHHHHHHHHHHHHHh---CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccc
Q psy8199 403 IARCAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEH 479 (965)
Q Consensus 403 ~~~~d~~~le~~l~~---~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~ 479 (965)
+.....+.+++.+++ ..+++||||+|| +++++|+++||++||++|+++|++||+++|+|||+|||||+|++|++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~iAAvI~EP-iqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~ 282 (459)
T PRK06931 204 GVKALTYYFENFIEDVESGVRKPAAVILEA-IQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEH 282 (459)
T ss_pred HHHHHHHHHHHHHHhhhcCCCceEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhh
Confidence 222222334444432 246799999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHH
Q psy8199 480 AEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMK 559 (965)
Q Consensus 480 ~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~ 559 (965)
+|+.||++|+||+|+|| +|+|++++++++ +.+.. ..|++||+|||++|++|+++|++++++++.++++++++
T Consensus 283 ~gv~PDivt~gK~l~gG-~Pi~av~~~~~~-~~~~~------~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~ 354 (459)
T PRK06931 283 AGIEPDIIVMSKAVGGG-LPLAVLGIKKEF-DAWQP------GGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGE 354 (459)
T ss_pred cCCCCCEEEecccccCC-cceeeeeeHHHH-hhccC------CCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999 799999988774 65532 35899999999999999999999999999999999999
Q ss_pred HHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccc---------hhhHHHHHHHHHHHcCcEEeec---CCEEEEeCC
Q psy8199 560 KITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---------IETFSKKFFVAALKNELLLRPI---GNTVYLMPP 626 (965)
Q Consensus 560 ~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~---------~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~ 626 (965)
+|+++|+++ .++|.+.+|+|.|+|+++++. .+..+ .......+...|+++|+++.+. ++++||.||
T Consensus 355 ~l~~~L~~l~~~~~~i~~vrG~Glm~giel~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Pp 433 (459)
T PRK06931 355 WLKAQLAELQKRYPCIGNVRGRGLMIGIEIV-DERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPP 433 (459)
T ss_pred HHHHHHHHHHHhCCCeEeEecCceEEEEEEc-cCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECC
Confidence 999999998 578989999999999999996 22111 1234556888899999999764 478999999
Q ss_pred cccCHHHHHHHHHhhhccccc
Q psy8199 627 YILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 627 ~~~t~~~i~~~~~~l~~~~~~ 647 (965)
+++++++++++++++.+++..
T Consensus 434 l~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 434 LLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred CCcCHHHHHHHHHHHHHHHHH
Confidence 999999999999999876643
No 32
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-63 Score=565.83 Aligned_cols=387 Identities=24% Similarity=0.389 Sum_probs=333.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.+...+.++...+|+++|++..|.+.++|+|++||||
T Consensus 45 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsE 124 (457)
T PRK05639 45 ALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSD 124 (457)
T ss_pred CEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHH
Confidence 99999999999999999999999999999999999999987665444456788999999999999866789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCC----CCh
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKG----NSA 400 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 400 (965)
|||.|+|+||.+ ++|.+||+++++|||+|.+++++++. ..++..+.+..+++.++|+|+.++.+.. .+.
T Consensus 125 A~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 198 (457)
T PRK05639 125 AVDMAIKVSKFS------TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEP 198 (457)
T ss_pred HHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCH
Confidence 999999999988 68899999999999999999998874 3455667777778888888865543321 123
Q ss_pred hHHHHHHHHHHHHHHHh---CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccc
Q psy8199 401 NEIARCAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC 477 (965)
Q Consensus 401 ~~~~~~d~~~le~~l~~---~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~ 477 (965)
+.+....++.+++.+.. .++++||||+|| +++++|.++||++||++|+++|++||+++|+|||+|||||+|++|++
T Consensus 199 ~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EP-iqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~ 277 (457)
T PRK05639 199 DELINRFLDYLENYVFSHVVPPDEVAALFAEP-IQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFAS 277 (457)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCceEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHH
Confidence 44555567778887643 257899999999 99999999999999999999999999999999999999999999999
Q ss_pred cccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHH
Q psy8199 478 EHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQD 557 (965)
Q Consensus 478 ~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~ 557 (965)
+++|+.||++||||+|+|| +|+|++++++++++.. . ..+.+||++||++|+|++++|++++++++.++++++
T Consensus 278 ~~~gv~PDiv~~gK~l~gG-~pi~av~~~~~i~~~~-~------~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~ 349 (457)
T PRK05639 278 EWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMDLT-S------GSALLTPAANPVISAAAEATLEIIEEENLLKNALKV 349 (457)
T ss_pred HhcCCCCCEEEechhhcCC-CcceeEEehHHHHhhc-C------CCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 9999999999999999999 6999999999999832 2 135689999999999999999999999999999999
Q ss_pred HHHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHHH
Q psy8199 558 MKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNE 633 (965)
Q Consensus 558 ~~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~~ 633 (965)
+++|+++|+++ .+++.+.+|+|.|+|+++++...........+..+.+.|+++|+++.+.+ +++||.||+++++++
T Consensus 350 g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~ 429 (457)
T PRK05639 350 GEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEI 429 (457)
T ss_pred HHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHH
Confidence 99999999998 56888899999999999999621111122345678889999999998753 799999999999999
Q ss_pred HHHHHHhhhccccc
Q psy8199 634 IQHMTSAIFQTFNE 647 (965)
Q Consensus 634 i~~~~~~l~~~~~~ 647 (965)
++++++++.+++..
T Consensus 430 id~~~~~l~~~l~~ 443 (457)
T PRK05639 430 AEKGLEIMERAIKD 443 (457)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998877643
No 33
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=5.9e-63 Score=584.86 Aligned_cols=420 Identities=24% Similarity=0.422 Sum_probs=341.0
Q ss_pred ccccccccCcccccccccCCCce---------eEEEecCCc----ccccccccchhccCC-CCCHHHHHHHHHHHhhccc
Q psy8199 223 KLGLIHPKNNLKLKWRINLPDDI---------SKLITFSGK----RYLDAISSWWVNLFG-HSNSYINKALKNQLNKLEH 288 (965)
Q Consensus 223 ~l~f~~p~~~~~~~~~~~~p~~~---------~~~~d~dG~----~ylD~~~~~~~~~lG-h~~p~v~~av~~~~~~~~~ 288 (965)
.-.+|||++++..... ..|.+| .|++|.+|+ +|||+.++||++++| |+||+|++|+++|++++.|
T Consensus 322 ~~~iw~Pftq~~~~~~-~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~h 400 (817)
T PLN02974 322 GEVLWWPFTQHALVPR-DSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGH 400 (817)
T ss_pred hhhccCCcccccccCC-CCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCc
Confidence 4478999999876421 123444 499999998 999999999999999 6899999999999999988
Q ss_pred cccCCCCcHHHHHHHHHHHhhcCCC-CCeEEEcCChhHHHHHHHHHHHH-HHHhcCCC------------CceEEEEEcC
Q psy8199 289 VMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGASAVEVALKMSFH-YWYNKGFL------------NKKKFICLQN 354 (965)
Q Consensus 289 ~~~~~~~~~~~~~la~~l~~~~~~~-~~~v~~~~sGseA~~~Al~~a~~-~~~~~g~~------------~~~~vi~~~~ 354 (965)
+++..+.+++..+|+++|++..+.+ +++|+|++|||||||.|||+|++ |++.+|.+ +|.+||.+++
T Consensus 401 v~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~g 480 (817)
T PLN02974 401 VMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDG 480 (817)
T ss_pred cccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECC
Confidence 8766789999999999999965423 68999999999999999999965 77777754 5889999999
Q ss_pred CccCCccccccccCCcCccchh-cc-cCCCeeEecCCCCC--------------CCCC----------------CCChhH
Q psy8199 355 SYHGETLGALAVTNIQSFKEIY-TS-LLNKTYIITTPDSR--------------NINK----------------GNSANE 402 (965)
Q Consensus 355 ~yHg~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~--------------~~~~----------------~~~~~~ 402 (965)
+|||.|.+++++++...++..+ .+ +.+...+++.|... +... ..+...
T Consensus 481 sYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~ 560 (817)
T PLN02974 481 SYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTP 560 (817)
T ss_pred CcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchh
Confidence 9999999999999866655543 23 22233344333211 0000 001123
Q ss_pred HHHHHHHHHHHHHHh-----CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccc
Q psy8199 403 IARCAIFDLEILLKK-----NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC 477 (965)
Q Consensus 403 ~~~~d~~~le~~l~~-----~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~ 477 (965)
+...+++.+++.|++ .++++||||+||++++.+|+++|+++|+++|+++|++||++||+|||+|||||+|++|++
T Consensus 561 ~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~ 640 (817)
T PLN02974 561 LAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAW 640 (817)
T ss_pred hhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhH
Confidence 444566788888863 256899999999558999999999999999999999999999999999999999999999
Q ss_pred cccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhccc----HHHH
Q psy8199 478 EHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN----ILQR 553 (965)
Q Consensus 478 ~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~----~~~~ 553 (965)
+++|+.||++|+||+|+|||+|+|++++++++++.|........+.|++||+|||++||+|+++|+++++++ +.++
T Consensus 641 e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~ 720 (817)
T PLN02974 641 ELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPP 720 (817)
T ss_pred HhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 999999999999999999999999999999999999632222457899999999999999999999999874 4555
Q ss_pred HHHHHHHHHHHH-HcccCCCceeeeeceeEEEEEEEeecCccc---hhhHHHHHHHHHH-HcCcEEeecCCEEEEeCCcc
Q psy8199 554 ISQDMKKITKAL-TSLITHPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAAL-KNELLLRPIGNTVYLMPPYI 628 (965)
Q Consensus 554 ~~~~~~~l~~~L-~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~---~~~~~~~~~~~l~-~~Gi~~~~~~~~lR~~p~~~ 628 (965)
.+++++++.+.| +.+.++|.|.+|||.|+|+++++. .+... ....+..+.+.++ ++|+++++.++++++.||+.
T Consensus 721 ~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~-~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~pP~~ 799 (817)
T PLN02974 721 GSRLRELWDEELVRAISSLPNVERVVSLGTVLALELD-AEGSGSGYSSLYARSVVRRLRREDGIYARPLGNVVYLMCGPT 799 (817)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEe-cCCcccccchHHHHHHHHHHHHhCCEEEEecCCEEEEeCCCC
Confidence 556666667777 455678999999999999999997 33211 1123456788888 99999999989999999999
Q ss_pred cCHHHHHHHHHhhhcc
Q psy8199 629 LNKNEIQHMTSAIFQT 644 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~~ 644 (965)
+++++++++++++.+.
T Consensus 800 i~~e~l~~~~~~l~~~ 815 (817)
T PLN02974 800 TSPETCTRLLRKVYRR 815 (817)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999988754
No 34
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-62 Score=561.24 Aligned_cols=406 Identities=40% Similarity=0.745 Sum_probs=350.5
Q ss_pred ccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHH
Q psy8199 225 GLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPV 299 (965)
Q Consensus 225 ~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~ 299 (965)
.+|+|+...... +.|+.+ +||||.|||+||||.+|+|+++|||+||+|.+|+++|++++.+.....++++..
T Consensus 11 ~~~~~~~~~~~~---~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~ 87 (423)
T PRK05964 11 HVWHPYTQMKLH---PPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPA 87 (423)
T ss_pred ceecCCCCcccc---CCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHH
Confidence 345565443221 245544 999999999999999999999999999999999999999876655446789999
Q ss_pred HHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhccc
Q psy8199 300 IKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSL 379 (965)
Q Consensus 300 ~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~ 379 (965)
.+|+++|++.+|.+.++|+|++|||||++.|+|+||.|+..+|.++|.+||+++++|||++.+++++++...++..+.+.
T Consensus 88 ~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~ 167 (423)
T PRK05964 88 ERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPL 167 (423)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCc
Confidence 99999999999866889999999999999999999999888888899999999999999999999999877666666666
Q ss_pred CCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeE
Q psy8199 380 LNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHL 459 (965)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 459 (965)
..++.++|+|... +...+++++++++.++++++++||+||++++++|+.+++++||++|+++|++||+++
T Consensus 168 ~~~~~~~~~~~~d----------~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~ll 237 (423)
T PRK05964 168 LFEQVTAPFPPDG----------YEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLL 237 (423)
T ss_pred CCCCEEeCCCcch----------hHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 6667777776321 223468999999987677899999999559999999999999999999999999999
Q ss_pred EEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHH
Q psy8199 460 IADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAAL 539 (965)
Q Consensus 460 I~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~ 539 (965)
|+|||||||||+|.+|+++++++.||++++||+++||++|+|++++++++++.+........+.|++||++||++|++++
T Consensus 238 I~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~ 317 (423)
T PRK05964 238 IFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAAN 317 (423)
T ss_pred EEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999998899999999999998854212334568999999999999999
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCC
Q psy8199 540 ATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGN 619 (965)
Q Consensus 540 a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~ 619 (965)
++|++++++++.++++++++++++.|+++.++|.+.++++.|+|+++++. .+.. ......+.+.|.++||++.+.++
T Consensus 318 a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~-~~~~--~~~~~~l~~~l~~~Gv~v~~~~~ 394 (423)
T PRK05964 318 ASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELD-RPVL--ERDGPALRAFALERGVLLRPLGN 394 (423)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEec-cCcc--hhHHHHHHHHHHHCCeEEEecCC
Confidence 99999988889999999999999999988668888889999999999996 2210 12345688899999999998888
Q ss_pred EEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 620 TVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 620 ~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
.+||+||+++++++++++++++.+++.
T Consensus 395 ~lR~~p~l~~t~edId~~v~~l~~al~ 421 (423)
T PRK05964 395 TIYLMPPYIITAEELDRITDAIVEVAD 421 (423)
T ss_pred EEEEeCCcccCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999876653
No 35
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=1.5e-62 Score=559.71 Aligned_cols=386 Identities=27% Similarity=0.410 Sum_probs=328.1
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCC---CCeEEEcCC
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK---LGHCFYGSD 322 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~---~~~v~~~~s 322 (965)
+||||.|||+||||.+|+|+.++||+||+|++|+++|++++.+.+...+.++...+|+++|++.+|.. ...++|++|
T Consensus 31 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~s 110 (442)
T TIGR00709 31 CWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPS 110 (442)
T ss_pred cEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCC
Confidence 99999999999999999999999999999999999999986554434578899999999999998743 234666799
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhH
Q psy8199 323 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 402 (965)
Q Consensus 323 GseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (965)
|||||+.|+|+||.| ++|.+||+++++|||++.+++++++.+.++..+.+..+++.++|.|+....+.+...+.
T Consensus 111 GsEA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (442)
T TIGR00709 111 GADAVEAAIKLAKTY------TGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEA 184 (442)
T ss_pred HHHHHHHHHHHHHHh------cCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchh
Confidence 999999999999998 58899999999999999999999987666666777777788888876655543322222
Q ss_pred HHHHHHHHHHHHHHh---CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccc
Q psy8199 403 IARCAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEH 479 (965)
Q Consensus 403 ~~~~d~~~le~~l~~---~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~ 479 (965)
......+.+++.++. ..+++++||+|| +++++|.++||++||++|+++|++||+++|+|||||||||+|++|++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~iaavi~Ep-i~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~ 263 (442)
T TIGR00709 185 GSNASIEYFENFIEDVESGVDKPAAVILEA-IQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEH 263 (442)
T ss_pred HHHHHHHHHHHHHHhhccCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHH
Confidence 222233445555532 246799999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHH
Q psy8199 480 AEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMK 559 (965)
Q Consensus 480 ~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~ 559 (965)
+|+.||++|+||+|+|| +|+|+++++++ ++.+.. ..|++||++||++|+||+++|++++++++.++++++++
T Consensus 264 ~gv~PDiv~~gK~l~~G-~Pigav~~~~~-~~~~~~------~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~ 335 (442)
T TIGR00709 264 AGIEPDFVVMSKAVGGG-LPLAVLLIAPE-FDAWQP------AGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGE 335 (442)
T ss_pred cCCCCcEEEEcccccCC-cccEEEEEchH-HhccCC------CcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999999 89999999988 455532 35889999999999999999999998999999999999
Q ss_pred HHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccc---------hhhHHHHHHHHHHHcCcEEeec---CCEEEEeCC
Q psy8199 560 KITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---------IETFSKKFFVAALKNELLLRPI---GNTVYLMPP 626 (965)
Q Consensus 560 ~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~---------~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~ 626 (965)
+|+++|+++ .++|.+.+|||.|+|+++++. .+..+ .......+...|+++|+++.+. ++++||.||
T Consensus 336 ~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Pp 414 (442)
T TIGR00709 336 RITSFLDDMIKEHPCIGNVRGRGLMQGIMIV-DERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCP 414 (442)
T ss_pred HHHHHHHHHHHhCCCeeeeeccceEEEEEEc-cCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECC
Confidence 999999998 578889999999999999996 22111 1124556888899999999764 579999999
Q ss_pred cccCHHHHHHHHHhhhccccc
Q psy8199 627 YILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 627 ~~~t~~~i~~~~~~l~~~~~~ 647 (965)
+++|+++++++++++.+++.+
T Consensus 415 l~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 415 ITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999877654
No 36
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-62 Score=560.75 Aligned_cols=383 Identities=28% Similarity=0.432 Sum_probs=327.1
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCC-CCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.++....+.++...+++++|++.+|.. .++++|++|||
T Consensus 48 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 127 (443)
T PRK06058 48 GIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGA 127 (443)
T ss_pred eEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 99999999999999999999999999999999999999987655544567899999999999998743 36999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCC--CChh
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKG--NSAN 401 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 401 (965)
||++.|+|+||.| ++|++||+++++|||++.+++++++. ..++..+.++.+++..+|.|..++.+.. ...+
T Consensus 128 eA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (443)
T PRK06058 128 EAVENAVKIARSY------TGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGE 201 (443)
T ss_pred HHHHHHHHHHHHh------hCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchH
Confidence 9999999999998 58899999999999999999998874 3356666666677777776544332211 1111
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccC
Q psy8199 402 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 481 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 481 (965)
.+...+++.+++.+. ++++||||+|| +++++|.++|+++||++|+++|++||+++|+|||||||||+|++|+++++|
T Consensus 202 ~~~~~~~~~l~~~~~--~~~iAavi~EP-i~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~g 278 (443)
T PRK06058 202 EAAARAITVIEKQVG--ADNLAAVIIEP-IQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEG 278 (443)
T ss_pred HHHHHHHHHHHHhhC--CCceEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcC
Confidence 222234555655543 46899999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 561 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l 561 (965)
+.||++|+||+++|| +|+|++++++++++.+.. ..|++||++||++|+||+++|++++++++.+++++++++|
T Consensus 279 v~PDiv~~gK~l~~G-~Pi~av~~~~~i~~~~~~------~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l 351 (443)
T PRK06058 279 IVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHP------GGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALM 351 (443)
T ss_pred CCCCEEEEcccccCC-CccEEEEEcHHHHhhccC------CCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 999999999999999 799999999999998864 3588999999999999999999999889999999999999
Q ss_pred HHHHHcc-cCCCceeeeeceeEEEEEEEeecCc--cchhhHHHHHHHHHHHcCcEEeec---CCEEEEeCCcccCHHHHH
Q psy8199 562 TKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP--EQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQ 635 (965)
Q Consensus 562 ~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~--~~~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~~~~t~~~i~ 635 (965)
.++|+++ .+++.+.+|+|.|+|+++++. .+. .+....+..+.+.|+++||++.+. ++++||.||+++++++++
T Consensus 352 ~~~L~~l~~~~~~i~~vrg~G~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~ 430 (443)
T PRK06058 352 TDRLRALAAEDDRIGDVRGRGAMIAIELV-KPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLR 430 (443)
T ss_pred HHHHHHHHhhCCcEEeeeccceEEEEEEe-cCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHH
Confidence 9999998 557888999999999999996 221 112335667888899999999874 479999999999999999
Q ss_pred HHHHhhhccc
Q psy8199 636 HMTSAIFQTF 645 (965)
Q Consensus 636 ~~~~~l~~~~ 645 (965)
++++++.+++
T Consensus 431 ~~~~~l~~~l 440 (443)
T PRK06058 431 EGLDVLEAAL 440 (443)
T ss_pred HHHHHHHHHH
Confidence 9999987654
No 37
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-62 Score=557.59 Aligned_cols=383 Identities=27% Similarity=0.450 Sum_probs=333.4
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+ .|+.+|||+||+|++|+++|++++.+.+ ..+.++...+|+++|++.+|...++|+|++||||
T Consensus 64 ~~l~D~dG~~ylD~~g-~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGse 141 (459)
T PRK06082 64 IYIEDVDGKKYMDFHG-NNVHQLGYGHPHVIEKVKEQMAKLPFSP-RRFTNETAIECAEKLTEIAGGELNRVLFAPGGTS 141 (459)
T ss_pred eEEEECCCCEEEEccc-HhhcccCCCCHHHHHHHHHHHHhCCCcc-CccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHH
Confidence 8999999999999974 4899999999999999999999876543 3678999999999999999855789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|++.|+|+||.| ++|.+||+++++|||++.+++++++.+.++..+.+..+++.++|.|..+..+.. +.+.+..
T Consensus 142 Ave~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 214 (459)
T PRK06082 142 AIGMALKLARHI------TGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFP-DADGSDV 214 (459)
T ss_pred HHHHHHHHHHHh------cCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccC-ChhHHHH
Confidence 999999999998 588999999999999999999999887777777888888888888765554322 2244566
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
.++++|++++++. ++++|||+|| ++++ |.++|+++||++|+++|++||+++|+|||+|||||+|++|+++++|+.||
T Consensus 215 ~~~~~l~~~i~~~-~~vAavIvEP-v~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PD 291 (459)
T PRK06082 215 HYADYLEYVIEKE-GGIGAFIAEA-VRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPD 291 (459)
T ss_pred HHHHHHHHHHhcC-CCEEEEEECC-ccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCC
Confidence 6788999988753 5799999999 8988 57788999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++||||+|+||++|+|++++++++++.+.. .+.| +||++||++|++|+++|++++++++.+++++++++|+++|
T Consensus 292 iv~~gKgl~gG~~P~~av~~~~~i~~~~~~-----~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L 365 (459)
T PRK06082 292 ILCIGKGLGGGLVPIAAMITKDKYNTAAQI-----SLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERL 365 (459)
T ss_pred EEEecccccCCCCcceEEEEcHHHHhhccC-----CCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 999999999997899999999998765421 2345 8999999999999999999988899999999999999999
Q ss_pred Hcc-cCCCceeeeeceeEEEEEEEeecCccc---hhhHHHHHHHHHHHcCcEEeec-CCEEEEeCCcccCHHHHHHHHHh
Q psy8199 566 TSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSA 640 (965)
Q Consensus 566 ~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~---~~~~~~~~~~~l~~~Gi~~~~~-~~~lR~~p~~~~t~~~i~~~~~~ 640 (965)
+++ .+++.+.+|+|.|+|+++++. .+... ....+..+...|+++||++.+. ++++||+||++++++++++++++
T Consensus 366 ~~l~~~~~~i~~vrG~Gl~~~ve~~-~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~~ 444 (459)
T PRK06082 366 LEMKAKYPLIGDVRGIGLLWGVELV-TDRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAI 444 (459)
T ss_pred HHHHhhCCCeeeeeeccceeEEEEc-cCccccCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHHH
Confidence 998 568888999999999999996 22211 1123556788899999999875 58999999999999999999999
Q ss_pred hhccccc
Q psy8199 641 IFQTFNE 647 (965)
Q Consensus 641 l~~~~~~ 647 (965)
+.+++.+
T Consensus 445 l~~~l~~ 451 (459)
T PRK06082 445 LEEAIAK 451 (459)
T ss_pred HHHHHHH
Confidence 9876644
No 38
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-62 Score=553.02 Aligned_cols=387 Identities=25% Similarity=0.436 Sum_probs=336.0
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCC-CeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+.+|++++.+.+...+.++...+++++|++.+|... ++|+|++|||
T Consensus 34 ~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGs 113 (445)
T PRK08593 34 ATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGS 113 (445)
T ss_pred CEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 999999999999999999999999999999999999999987765555789999999999999998553 6999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc-CccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
|||+.|+|+||.| ++|.+||+++++|||++.+++++++.. .++..+.+..+++.++|.|+....+.+......
T Consensus 114 eA~e~AiklAr~~------tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 187 (445)
T PRK08593 114 DANDGIIKFARAY------TGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANF 187 (445)
T ss_pred HHHHHHHHHHHHh------hCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHH
Confidence 9999999999998 588999999999999999999998843 345566777788888888876554433332333
Q ss_pred HHHHHHHHHHHHHhC--CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccC
Q psy8199 404 ARCAIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 481 (965)
Q Consensus 404 ~~~d~~~le~~l~~~--~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 481 (965)
....++++++++.+. .+++++||+|| +++++|.++||++||++|+++|++||+++|+|||||||||+|.+|+++++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~iAavI~EP-v~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~g 266 (445)
T PRK08593 188 VEEYLAPLKEMFEKYLPADEVACIVIET-IQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFN 266 (445)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcC
Confidence 344567787777543 46899999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 561 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l 561 (965)
+.||++|+||+++|| +|+|++++++++++.+.. ..|++||++||++|++++++|++++++++.+++++++++|
T Consensus 267 v~pDi~t~gK~l~~G-~p~gav~~~~~i~~~~~~------~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l 339 (445)
T PRK08593 267 ITPDLMSFGKSLAGG-MPMSAIVGRKEIMESLEA------PAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYA 339 (445)
T ss_pred CCCCEeeecccccCC-cccEEEEEcHHHHhhhcc------CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999999999999 799999999999998853 1467899999999999999999999889999999999999
Q ss_pred HHHHHcc-cCCCceeeeeceeEEEEEEEeecCcc---chhhHHHHHHHHHHHcCcEEeec-CCEEEEeCCcccCHHHHHH
Q psy8199 562 TKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQH 636 (965)
Q Consensus 562 ~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~---~~~~~~~~~~~~l~~~Gi~~~~~-~~~lR~~p~~~~t~~~i~~ 636 (965)
+++|+++ .++|.+.+|+|.|+|+++++. .+.. .....+..+...|+++||++.+. ++.+||+||+++|++++++
T Consensus 340 ~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~-~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~ 418 (445)
T PRK08593 340 RKRFDQWVSKYNFVGDVRGYGLSIGIDIV-SDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDT 418 (445)
T ss_pred HHHHHHHHhcCCcEEEEeccceEEEEEEe-cCCCcCCCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCccCHHHHHH
Confidence 9999998 668889999999999999986 2211 11234557888999999999774 5899999999999999999
Q ss_pred HHHhhhccccc
Q psy8199 637 MTSAIFQTFNE 647 (965)
Q Consensus 637 ~~~~l~~~~~~ 647 (965)
+++++.+++..
T Consensus 419 ~~~~l~~~l~~ 429 (445)
T PRK08593 419 ALNTIEQAFTA 429 (445)
T ss_pred HHHHHHHHHHH
Confidence 99998876654
No 39
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.3e-61 Score=544.80 Aligned_cols=384 Identities=28% Similarity=0.445 Sum_probs=332.6
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCC-CCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.+...+.++...+|+++|++.+|.+ .++|+|++|||
T Consensus 46 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGs 125 (441)
T PRK05769 46 VWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGT 125 (441)
T ss_pred EEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 99999999999999999999999999999999999999988766555677899999999999998743 58999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCC-CChhH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKG-NSANE 402 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 402 (965)
|||+.|+|+||.| ++|.+|++++++|||+|.+++++++. ..++..+.+..+++.++|.|+....+++ .+.++
T Consensus 126 EA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (441)
T PRK05769 126 ESNEAAIKIARYH------TGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEE 199 (441)
T ss_pred HHHHHHHHHHHHH------hCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHH
Confidence 9999999999998 58899999999999999999998764 3456667777788888888765554432 22333
Q ss_pred HHHHHHHHHHH-HHHh--CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccc
Q psy8199 403 IARCAIFDLEI-LLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEH 479 (965)
Q Consensus 403 ~~~~d~~~le~-~l~~--~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~ 479 (965)
+...+++.+++ ++++ .++++++||+|| +++++|.++|+++||++|+++|++||+++|+|||+|||||+|++|++++
T Consensus 200 ~~~~~~~~le~~~~~~~~~~~~iaavi~Ep-v~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~ 278 (441)
T PRK05769 200 CGNAVLDFIEDYLFKKLVPPEEVAAIIVEP-IQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEH 278 (441)
T ss_pred HHHHHHHHHHHHHHhhccCCCceEEEEECc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhc
Confidence 44456777887 4443 356899999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHH
Q psy8199 480 AEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMK 559 (965)
Q Consensus 480 ~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~ 559 (965)
+|+.||++||||+++|| +|+|++++++++++.+. ..|++||++||++|++|+++|+++++ ++.++++++++
T Consensus 279 ~gv~pDivt~~K~l~~G-~p~gav~~~~~i~~~~~-------~~~~~T~~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~ 349 (441)
T PRK05769 279 FGVEPDIITLAKAIAGG-LPLGAVIGRAELMFLPP-------GSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGE 349 (441)
T ss_pred cCCCCCEEEEcccccCC-cccEEEEEehhhhhcCC-------CCCCCCCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 99999999999999999 79999999999986432 25889999999999999999999988 99999999999
Q ss_pred HHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCc-cchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHH
Q psy8199 560 KITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP-EQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQH 636 (965)
Q Consensus 560 ~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~-~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~ 636 (965)
+|+++|+++ .+++.+.+++|.|+|+++++. .+. .........+.+.|+++||++.+.+ +.+||+||++++++++++
T Consensus 350 ~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~ 428 (441)
T PRK05769 350 YLRKELKELKEKYEFIGDVRGLGLMIGVELV-KDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADI 428 (441)
T ss_pred HHHHHHHHHHHhCCCeeeeecceEEEEEEec-cCCccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHH
Confidence 999999988 568888899999999999996 221 1122345568888999999998865 799999999999999999
Q ss_pred HHHhhhcccc
Q psy8199 637 MTSAIFQTFN 646 (965)
Q Consensus 637 ~~~~l~~~~~ 646 (965)
+++++.+++.
T Consensus 429 ~~~~l~~~l~ 438 (441)
T PRK05769 429 GLEILEEAIK 438 (441)
T ss_pred HHHHHHHHHH
Confidence 9999887653
No 40
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-61 Score=542.72 Aligned_cols=381 Identities=28% Similarity=0.444 Sum_probs=331.9
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCC-CeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.+...++++...+++++|++.+|.+. ++|+|++|||
T Consensus 32 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGs 111 (425)
T PRK07495 32 AEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGA 111 (425)
T ss_pred cEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 999999999999999999999999999999999999999986654446788999999999999998543 7999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
|||+.|+|+||.| ++|.+||+++++|||+|.+++++++. ..++..+.+..+++.++|+|...... +
T Consensus 112 eA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~---- 178 (425)
T PRK07495 112 EAVENAVKIARAA------TGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGV---S---- 178 (425)
T ss_pred HHHHHHHHHHHHh------hCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccc---c----
Confidence 9999999999998 58899999999999999999998875 45666777777788888887543321 1
Q ss_pred HHHHHHHHHHHHHh--CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccC
Q psy8199 404 ARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 481 (965)
Q Consensus 404 ~~~d~~~le~~l~~--~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 481 (965)
...+++++++++.+ ..+++++|++|| +++++|.+++|++|+++|+++|++||+++|+|||||||||+|++|++++++
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EP-v~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~g 257 (425)
T PRK07495 179 VEQSLAALDKLFKADVDPQRVAAIIIEP-VQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHE 257 (425)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccC
Confidence 12457778888763 246799999999 999999899999999999999999999999999999999999999999999
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 561 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l 561 (965)
+.||++||||+++|| +|+|++++++++++.+.. ..+++||++||++|++++++|++++++++.+++++++++|
T Consensus 258 v~pDi~tlsK~l~~G-~pigav~~~~~i~~~~~~------~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l 330 (425)
T PRK07495 258 VAADLTTMAKGLAGG-FPLAAVTGRAEIMDAPGP------GGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRL 330 (425)
T ss_pred CCCCEEeehhhhcCC-ccceEEEEcHHHHhccCC------CCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 999999999999999 799999999999988754 2478999999999999999999999889999999999999
Q ss_pred HHHHHcc-cCCCceeeeeceeEEEEEEEeecCc-cchhhHHHHHHHHHHHcCcEEeec---CCEEEEeCCcccCHHHHHH
Q psy8199 562 TKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP-EQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQH 636 (965)
Q Consensus 562 ~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~-~~~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~~~~t~~~i~~ 636 (965)
+++|+++ .++|.+.+++|.|+|+++++...+. .+.......+.+.|+++|+++.+. ++++||.||++++++++++
T Consensus 331 ~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~ 410 (425)
T PRK07495 331 KQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAE 410 (425)
T ss_pred HHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHHH
Confidence 9999998 5678889999999999999962111 111234557888999999998764 4799999999999999999
Q ss_pred HHHhhhccccc
Q psy8199 637 MTSAIFQTFNE 647 (965)
Q Consensus 637 ~~~~l~~~~~~ 647 (965)
+++++.+++.+
T Consensus 411 ~~~~l~~~l~~ 421 (425)
T PRK07495 411 ALDILEASILE 421 (425)
T ss_pred HHHHHHHHHHH
Confidence 99998877654
No 41
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-60 Score=544.39 Aligned_cols=387 Identities=32% Similarity=0.508 Sum_probs=338.6
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+++|||+||+|++|+++|++++.+.+...+.++...+|+++|++.+|.+.++|+|++||||
T Consensus 35 ~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGse 114 (433)
T PRK08117 35 CYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAE 114 (433)
T ss_pred eEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHH
Confidence 99999999999999999999999999999999999999987665444567899999999999999767889999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
||+.|+|+||.| ++|.+||+++++|||++.+++++++. ..++..+.+..+++.++|.|+..+.+.+.....+.
T Consensus 115 A~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (433)
T PRK08117 115 AIEGALKLAKHV------TKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCF 188 (433)
T ss_pred HHHHHHHHHHHh------cCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHH
Confidence 999999999998 58899999999999999999988763 44555666777788889988766555444445677
Q ss_pred HHHHHHHHHHHHh--CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC
Q psy8199 405 RCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 482 (965)
Q Consensus 405 ~~d~~~le~~l~~--~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~ 482 (965)
.+|++++++++++ ..+++++||+|| +++++|.+.|+++||++|+++|++||+++|+||||+||||+|++++++++|+
T Consensus 189 ~~~~~~l~~~~~~~~~~~~~aavi~Ep-i~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv 267 (433)
T PRK08117 189 LECLRDLESLFKHQVTPEEVAAVIIEP-VLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV 267 (433)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEEECC-eeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC
Confidence 7899999998874 356799999999 9999999999999999999999999999999999999999999988899999
Q ss_pred CcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 483 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 483 ~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
.||++||||+++|| +|+|++++++++++.+.. ..+++||++||++|++++++|+.++++++.+++++++++++
T Consensus 268 ~pDi~t~sK~lg~G-~pigav~~~~~i~~~~~~------~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~ 340 (433)
T PRK08117 268 VPDIMTIAKGIASG-LPLSAVVASKELMEQWPL------GSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYAL 340 (433)
T ss_pred CCCEeehhhhccCC-CcceeEEEcHHHHhhccC------CCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 99999999999998 799999999999988754 35889999999999999999999988889999999999999
Q ss_pred HHHHcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHHHHHHHH
Q psy8199 563 KALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEIQHMT 638 (965)
Q Consensus 563 ~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~~i~~~~ 638 (965)
++|+++ .+++.+.++++.|+|+++++...++.+.......+.+.++++||++.+.+ +++||+||++++++++++++
T Consensus 341 ~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~ 420 (433)
T PRK08117 341 ERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGL 420 (433)
T ss_pred HHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHH
Confidence 999988 56777789999999999999722211122345567888999999987643 79999999999999999999
Q ss_pred Hhhhcccc
Q psy8199 639 SAIFQTFN 646 (965)
Q Consensus 639 ~~l~~~~~ 646 (965)
+++.+++.
T Consensus 421 ~~l~~~l~ 428 (433)
T PRK08117 421 DILDEALT 428 (433)
T ss_pred HHHHHHHH
Confidence 99976653
No 42
>KOG1401|consensus
Probab=100.00 E-value=7.5e-61 Score=494.38 Aligned_cols=369 Identities=32% Similarity=0.472 Sum_probs=313.5
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCC-CCCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~v~~~~sGs 324 (965)
++++|.||++|+|+.++||+..+||+||++.+|+.+|+.++.|+.+..++.+ ..++++.|.+..+. +.++|+|+||||
T Consensus 48 ~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~~~~~rvff~nsGT 126 (433)
T KOG1401|consen 48 SKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGKGSAERVFFCNSGT 126 (433)
T ss_pred eeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccCCCccEEEEecCCc
Confidence 9999999999999999999999999999999999999999999876666665 99999999987742 578999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
||||.|||+||+++..+-..++.++|.|+++|||.|.++++++++..++-++.|..+++...++
T Consensus 127 eAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~y---------------- 190 (433)
T KOG1401|consen 127 EANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEY---------------- 190 (433)
T ss_pred HHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeeccc----------------
Confidence 9999999999998654444455679999999999999999999999888888888888777655
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCc
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 484 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 484 (965)
||..+|++.++.+.+.++|||+|| ++++||.++++++||..|+.+|+++|++||+|||||||||+|..|+++++++.|
T Consensus 191 -nd~t~l~k~~~~h~~~IaAVIvEP-iqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~P 268 (433)
T KOG1401|consen 191 -NDSTALEKLFESHKGEIAAVIVEP-IQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTP 268 (433)
T ss_pred -CCHHHHHHHHHhCCCceEEEEEec-ccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCC
Confidence 689999999999888899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Q psy8199 485 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 564 (965)
Q Consensus 485 Divt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~ 564 (965)
|+.|++|.|||| +|+||+++++++++.+..+ .++.|++||+|||++|+++..+|+.+.++++++++.+.++.|++.
T Consensus 269 DI~t~aK~L~gG-lPigA~~v~~kV~~~i~~~---~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~ 344 (433)
T KOG1401|consen 269 DITTVAKPLGGG-LPIGATGVRDKVAEMISPG---DHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKL 344 (433)
T ss_pred cceeehhhccCC-ceeEEEeehHHHHhhcCCC---CccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 999999999999 8999999999999999863 348899999999999999999999999999999999999999999
Q ss_pred HHcc-cCCCc-eeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-----CEEEEeC--CcccC--HHH
Q psy8199 565 LTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-----NTVYLMP--PYILN--KNE 633 (965)
Q Consensus 565 L~~l-~~~~~-i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~lR~~p--~~~~t--~~~ 633 (965)
|.+. .+.+. +....++|+++++.+. ... . .+.+...+.|.+..+.+ ..+|+.| .++.. +|.
T Consensus 345 l~e~~~~~~~~i~g~~grgl~ig~~~~-~p~---~----~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~ 416 (433)
T KOG1401|consen 345 LDEYLKKTPNSICGGVGRGLVIGFEFE-GPV---Y----KFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEV 416 (433)
T ss_pred HHHHhccCCCceeeeeeeEEEEEEEEe-ech---h----hhhhhhhhhhHHHHHHhcccccceEEEeccccccccCcHHH
Confidence 9776 55554 3344899999999886 211 1 11222222222222211 3577777 33433 777
Q ss_pred HHHHHHhhhccc
Q psy8199 634 IQHMTSAIFQTF 645 (965)
Q Consensus 634 i~~~~~~l~~~~ 645 (965)
++..++.+.+.+
T Consensus 417 i~~~l~i~~~~l 428 (433)
T KOG1401|consen 417 IQRLLTILEKVL 428 (433)
T ss_pred HHHHHHHHHHHH
Confidence 777777665543
No 43
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-60 Score=537.48 Aligned_cols=379 Identities=25% Similarity=0.420 Sum_probs=330.0
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCC-CCCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.....+.++...+++++|++..|. +.++++|++|||
T Consensus 32 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGs 111 (421)
T PRK06777 32 ATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGA 111 (421)
T ss_pred CEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcH
Confidence 9999999999999999999999999999999999999999866554456789999999999999873 468999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
||+|.|+|+||.| ++|.+|++++++|||+|.+++++++. ..++..+.++.+++.++|.|+..... .
T Consensus 112 eA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~ 178 (421)
T PRK06777 112 EAVENAVKIARAY------TGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGV-------S 178 (421)
T ss_pred HHHHHHHHHHHHh------hCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCc-------C
Confidence 9999999999998 58899999999999999999998875 34566666777777787777533211 1
Q ss_pred HHHHHHHHHHHHHh--CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccC
Q psy8199 404 ARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 481 (965)
Q Consensus 404 ~~~d~~~le~~l~~--~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 481 (965)
...|++++++.+++ .++++++||+|| +++++|..+++++|+++|+++|++||+++|+|||||||||+|++|++++++
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~ 257 (421)
T PRK06777 179 VEEALSSVERLFKADIAPDQVAAILLEP-IQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYD 257 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcC
Confidence 23577888888864 357899999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 561 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l 561 (965)
+.||++||||+++|| +|+|++++++++++.+.. ..+++||++||++|++++++|+.++++++.+++++++++|
T Consensus 258 ~~pDiv~~sK~l~~G-~pigav~~~~~i~~~~~~------~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l 330 (421)
T PRK06777 258 VKPDLITMAKSLGGG-MPISAVVGRAEVMDAPAP------GGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHL 330 (421)
T ss_pred CCCCEEeeehhhcCC-CceEEEEEcHHHHhccCC------CCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999999999988 799999999999988764 2478999999999999999999998889999999999999
Q ss_pred HHHHHcc-cCCCceeeeeceeEEEEEEEeecC-ccchhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHHHHHH
Q psy8199 562 TKALTSL-ITHPKIINFRQKGMIWAFDVIIED-PEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEIQH 636 (965)
Q Consensus 562 ~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~-~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~~i~~ 636 (965)
+++|+++ .++|.+..++|.|+|+++++.... ..+...++..+...++++||++.|.+ +++||.||++++++++++
T Consensus 331 ~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~ 410 (421)
T PRK06777 331 VEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSK 410 (421)
T ss_pred HHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHH
Confidence 9999998 567888899999999999886211 11223456677888899999998853 799999999999999999
Q ss_pred HHHhhhccc
Q psy8199 637 MTSAIFQTF 645 (965)
Q Consensus 637 ~~~~l~~~~ 645 (965)
+++++.+.+
T Consensus 411 ~~~~l~~~l 419 (421)
T PRK06777 411 ALNILTRLL 419 (421)
T ss_pred HHHHHHHHH
Confidence 999887654
No 44
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.3e-60 Score=535.18 Aligned_cols=387 Identities=27% Similarity=0.409 Sum_probs=335.9
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+++|||+||+|++|+++|++++.+.+...+.++...+|+++|++.+|.+.++|+|++||||
T Consensus 33 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsE 112 (443)
T PRK08360 33 AKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSD 112 (443)
T ss_pred eEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHH
Confidence 99999999999999999999999999999999999999998776655567889999999999999866789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc-CccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
||+.|+|+||.| ++|.+|+.+.++|||++.+++++++.. .++..+.+ .+++.++|+|+......+.....+.
T Consensus 113 Ave~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (443)
T PRK08360 113 ANDGAIKFARAY------TKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE-LSDVHYIPYPDCYRCPFGKEPGSCK 185 (443)
T ss_pred HHHHHHHHHHHh------cCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC-CCCcEEEeCCccccccccCchhhhH
Confidence 999999999998 589999999999999999999988743 34445555 5677888888665544333334455
Q ss_pred HHHHHHHHHHHHh--CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC
Q psy8199 405 RCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 482 (965)
Q Consensus 405 ~~d~~~le~~l~~--~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~ 482 (965)
.++++.++++++. .+++++||++|| +++++|.+.++++|+++|+++|++||+++|+||||+||||+|++++++++++
T Consensus 186 ~~~~~~~~~~l~~~~~~~~iAAvi~eP-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~ 264 (443)
T PRK08360 186 MECVEYIKEKFEGEVYAEGVAALFAEP-IQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV 264 (443)
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC
Confidence 5778888888864 247899999999 9999999999999999999999999999999999999999999889888999
Q ss_pred CcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 483 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 483 ~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
.||++||||++++| +|+|++++++++++.+.. ..+++|+++||++|++++++|+.++++++.+++++++++|+
T Consensus 265 ~pDiitlsK~l~~G-~pigav~~~~~i~~~~~~------~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~ 337 (443)
T PRK08360 265 EPDIITLGKPLGGG-LPISATIGRAEIMDSLPP------LAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTK 337 (443)
T ss_pred CCCEEEecccccCC-ceeEEEEEcHHHHhhhcC------CCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 99999999999988 899999999999998864 34788999999999999999999988899999999999999
Q ss_pred HHHHcc-cCCCceeeeeceeEEEEEEEeecCccc---hhhHHHHHHHHHHHcCcEEeec-CCEEEEeCCcccCHHHHHHH
Q psy8199 563 KALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHM 637 (965)
Q Consensus 563 ~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~---~~~~~~~~~~~l~~~Gi~~~~~-~~~lR~~p~~~~t~~~i~~~ 637 (965)
++|+++ .+++.+.+++|.|+|+++++. .+..+ ....+..+...|+++|+++.+. ++.+||+||+++++++++++
T Consensus 338 ~~L~~l~~~~~~v~~vrg~Gl~~gie~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~ 416 (443)
T PRK08360 338 KRLEEMKKKHELIGDVRGIGLMIGVDLV-KDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEG 416 (443)
T ss_pred HHHHHHHHhCCCeeeeeccceEEEEEEe-cCCcccCccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHH
Confidence 999988 567888899999999999996 22111 1223456888999999998764 58999999999999999999
Q ss_pred HHhhhcccccH
Q psy8199 638 TSAIFQTFNEL 648 (965)
Q Consensus 638 ~~~l~~~~~~~ 648 (965)
++++.+++..+
T Consensus 417 ~~~l~~~l~~~ 427 (443)
T PRK08360 417 LDILEEAIEDV 427 (443)
T ss_pred HHHHHHHHHHH
Confidence 99998766543
No 45
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=7.7e-60 Score=536.59 Aligned_cols=385 Identities=26% Similarity=0.397 Sum_probs=332.3
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCC-CCCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.....+.++...+++++|++..|. +.++|+|++|||
T Consensus 25 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 104 (420)
T TIGR00700 25 AILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGA 104 (420)
T ss_pred eEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 9999999999999999999999999999999999999998766554456788899999999999873 457999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc-CccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
||+|.|+|+||.| ++|.+||+++++|||+|.+++++++.. .++..+.++.+++.++|.|+.++...+.....+
T Consensus 105 eA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (420)
T TIGR00700 105 EAVENAVKIARSY------TGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLST 178 (420)
T ss_pred HHHHHHHHHHHHh------cCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhH
Confidence 9999999999998 588899999999999999999988753 456667777778888888765543322212221
Q ss_pred HHHHHHHHHHHHH--hCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccC
Q psy8199 404 ARCAIFDLEILLK--KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 481 (965)
Q Consensus 404 ~~~d~~~le~~l~--~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 481 (965)
..+++++++++. ..++++||||+|| +++++|.++++++|+++|+++|++||+++|+|||||||||+|+++++++++
T Consensus 179 -~~~~~~~~~~~~~~~~~~~iAavi~Ep-i~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~ 256 (420)
T TIGR00700 179 -DGELAAARAIFVIDVGANNVAALVIEP-VQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEG 256 (420)
T ss_pred -HHHHHHHHHHHHhhcCCCcEEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcC
Confidence 235788888874 3467899999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 561 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l 561 (965)
+.||++||||++++| +|+|++++++++++.+.. ..+++||++||++|++++++|++++++++.++++++++++
T Consensus 257 ~~pDi~~lsK~l~~G-~pig~v~~~~~i~~~~~~------~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l 329 (420)
T TIGR00700 257 PEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAP------GGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLV 329 (420)
T ss_pred CCCCEEEeeccccCC-cceEEEEecHHHHhhcCC------CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999999999988 799999999999988754 3578999999999999999999998889999999999999
Q ss_pred HHHHHcc-cCCCceeeeeceeEEEEEEEeecC-ccchhhHHHHHHHHHHHcCcEEeec---CCEEEEeCCcccCHHHHHH
Q psy8199 562 TKALTSL-ITHPKIINFRQKGMIWAFDVIIED-PEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQH 636 (965)
Q Consensus 562 ~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~-~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~~~~t~~~i~~ 636 (965)
+++|+++ .++|.+..+++.|+|+++++...+ ..+...++..+.+.|.++||++.|. ++++||+||++++++++++
T Consensus 330 ~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~ 409 (420)
T TIGR00700 330 TDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSE 409 (420)
T ss_pred HHHHHHHHhhCCCEEEeeccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHH
Confidence 9999988 567888899999999999985211 1112345667888889999999885 4799999999999999999
Q ss_pred HHHhhhccc
Q psy8199 637 MTSAIFQTF 645 (965)
Q Consensus 637 ~~~~l~~~~ 645 (965)
+++++.+.+
T Consensus 410 ~~~~l~~~l 418 (420)
T TIGR00700 410 GLDILCAIL 418 (420)
T ss_pred HHHHHHHHh
Confidence 999887654
No 46
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=4.9e-60 Score=532.30 Aligned_cols=376 Identities=23% Similarity=0.342 Sum_probs=310.7
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHH--HhhccccccCCCCcHHHHHHHHHHHh----hcCCCCCeEEE
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQ--LNKLEHVMLSNLTHKPVIKLSEKLSS----LTQYKLGHCFY 319 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~--~~~~~~~~~~~~~~~~~~~la~~l~~----~~~~~~~~v~~ 319 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++| ...+.+. +.+.++...+++++|++ .+|.+.++|+|
T Consensus 50 ~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~--~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f 127 (464)
T TIGR00699 50 NYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINR--PALGNFPSKDWAKILKEGILKVAPKGQDQVWT 127 (464)
T ss_pred CEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhccc--ccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEE
Confidence 9999999999999999999999999999999999985 3333332 34677888889998754 67767789999
Q ss_pred cCChhHHHHHHHHHHHHHHHhcCC-------------------CC--ceEEEEEcCCccCCccccccccCCcCccchhcc
Q psy8199 320 GSDGASAVEVALKMSFHYWYNKGF-------------------LN--KKKFICLQNSYHGETLGALAVTNIQSFKEIYTS 378 (965)
Q Consensus 320 ~~sGseA~~~Al~~a~~~~~~~g~-------------------~~--~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~ 378 (965)
++|||||||+|+|+|+.|+..+++ ++ |.+||+++++|||+|.+++++++.+.+.... +
T Consensus 128 ~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~-~ 206 (464)
T TIGR00699 128 GMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLD-I 206 (464)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccC-C
Confidence 999999999999999998754321 22 3389999999999999999999865444332 2
Q ss_pred cCCCeeEecCCCCCCCCCC---CChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy8199 379 LLNKTYIITTPDSRNINKG---NSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 455 (965)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 455 (965)
...++.++|.|... .+.. ...+.+..+++++++++++++.+++||||+|| +++++|.++|+++||++|+++|++|
T Consensus 207 ~~~~~~~~p~p~~~-~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EP-v~g~~G~~~~~~~yl~~lr~lc~~~ 284 (464)
T TIGR00699 207 PAFDWPQAPFPSLK-YPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEP-IQSEGGDNHASPDFFRKLRDITKKH 284 (464)
T ss_pred CCCCceecCCCCcc-cccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeC-CCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 23456677777521 1111 11234567889999999987667899999999 9999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCC--cceeeeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCH
Q psy8199 456 NIHLIADEIAVGCGRTGKFFACEHAEIW--PDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNP 532 (965)
Q Consensus 456 g~llI~DEv~tg~gr~G~~~~~~~~~~~--pDivt~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~ 532 (965)
|++||+|||+|||||+|.+|+++++|+. ||++||||+|+ ||+ + +++ +. +.. ...+.|++||++||
T Consensus 285 g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~-~----~~~-~~---~~~---~~~~~~~~T~~gnp 352 (464)
T TIGR00699 285 NVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGY-F----FHD-PA---FRP---NKPYRQFNTWMGDP 352 (464)
T ss_pred CCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCc-c----ccc-hh---ccC---CCCcccccCCCCCH
Confidence 9999999999999999999999999997 99999999996 563 3 222 22 211 12356899999999
Q ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcc-cCCC-ceeeee--ceeEEEEEEEeecCccchhhHHHHHHHHHH
Q psy8199 533 LACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHP-KIINFR--QKGMIWAFDVIIEDPEQIETFSKKFFVAAL 608 (965)
Q Consensus 533 ~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~i~~v~--g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~ 608 (965)
++|++++++|++++++++.+++++++++|+++|+++ .++| .|.+|| |.|+|+++++. + ...+..+.+.++
T Consensus 353 ~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~--~----~~~~~~i~~~~~ 426 (464)
T TIGR00699 353 SRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTP--D----EAKRDKLLKKAR 426 (464)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecC--C----HHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 5688 688999 99999999984 2 223567889999
Q ss_pred HcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 609 KNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 609 ~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
++|+++.+.+ +.+||.||+++++++++++++++.++
T Consensus 427 ~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 427 NNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred HCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 9999998876 79999999999999999999988754
No 47
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=1.4e-59 Score=532.39 Aligned_cols=386 Identities=38% Similarity=0.699 Sum_probs=338.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.|||+||||.+++|+.+|||+||+|++|+++|++++.+......+++...+++++|++.+|.++++|+|++||||
T Consensus 37 ~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGse 116 (427)
T TIGR00508 37 VELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSV 116 (427)
T ss_pred eEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHH
Confidence 89999999999999999999999999999999999999987665545568899999999999999877899999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
|++.|+|+|+.|++.+|.++|.+||+++++|||.+.+++++++. ..++..+.+..++..++|.|..... ..+.
T Consensus 117 A~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~~~~ 190 (427)
T TIGR00508 117 AVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFD------EEWN 190 (427)
T ss_pred HHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCcccc------chhH
Confidence 99999999999988788888999999999999999999998874 2344455555566666666643211 1234
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
.+|++++++++.+..+++++||+|| + ++++|.++++.+||++|+++|++||+++|+|||+|||||+|++|+++++++.
T Consensus 191 ~~~~~~l~~~l~~~~~~vaavivEP-v~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~ 269 (427)
T TIGR00508 191 EEAITPLAKLMELHSDEIAAVILEP-IVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVV 269 (427)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEec-hhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCC
Confidence 5688999999976667899999999 6 9999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 563 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~ 563 (965)
||++|+||+++||++|++++++++++++.+... ....+.|++||++||++|++++++|++++++++.+++++++++|++
T Consensus 270 pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~-~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~ 348 (427)
T TIGR00508 270 PDILCVGKALTGGYMTLSATVTTDKVAQTISSG-EAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKR 348 (427)
T ss_pred CCEEEechhhhcCcccceEEEEcHHHHHHHhcC-CCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999988999999999999988642 1234568999999999999999999999888999999999999999
Q ss_pred HHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 564 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 564 ~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+|+++..++.+..++|.|+|+.+++. .+ .....+.+.|+++||++.+.++.+||+||+++++++|+++++++.+
T Consensus 349 ~L~~l~~~~~i~~vrg~G~~~~i~~~-~~-----~~~~~~~~~l~~~Gv~~~~~~~~l~~~ppl~~t~~~id~~~~~l~~ 422 (427)
T TIGR00508 349 ELSPLRKNPVVKDVRVLGAIGVVEMY-KP-----VNVEELQKKFVEQGVWIRPFGKLIYVMPPYIITTEQLQKLTAALIE 422 (427)
T ss_pred HHHHhhcCCCEEeEeccccEEEEEEC-Cc-----cCHHHHHHHHHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 99998667778899999999999996 21 1134688899999999998888999999999999999999999887
Q ss_pred cc
Q psy8199 644 TF 645 (965)
Q Consensus 644 ~~ 645 (965)
++
T Consensus 423 ~l 424 (427)
T TIGR00508 423 AL 424 (427)
T ss_pred HH
Confidence 65
No 48
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=7.5e-60 Score=530.50 Aligned_cols=369 Identities=24% Similarity=0.402 Sum_probs=326.9
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.+. .+.+++..+++++|++..| ..++|+|++||||
T Consensus 32 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~L~~~~~-~~~~v~f~~sGse 109 (408)
T PRK04612 32 SRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSN-VFYSAPPLKLAEELVTASR-FAEKVFLCNSGTE 109 (408)
T ss_pred CEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHHHhhCC-CCCEEEEcCchHH
Confidence 9999999999999999999999999999999999999998766542 4678899999999999886 3489999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-CCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGF-LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~-~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
|||.|+|+||.|++.+|. ++|.+||+++++|||++.+++++++.+.++..+.+..+++.++|++
T Consensus 110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--------------- 174 (408)
T PRK04612 110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFN--------------- 174 (408)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCC---------------
Confidence 999999999999877775 4577899999999999999999998877776666666666666553
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCc
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 484 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 484 (965)
|+++++++++ .+++++|++|| +++++|++.++++|+++|+++|++||+++|+|||||||||+|.+|+.+.+++.|
T Consensus 175 --d~~~l~~~~~--~~~~aavi~eP-~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~p 249 (408)
T PRK04612 175 --DVEALEAAMA--GGDVAAVMLEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTP 249 (408)
T ss_pred --CHHHHHHhhC--CCCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCC
Confidence 6788888885 46799999999 999999999999999999999999999999999999999999988888889999
Q ss_pred ceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Q psy8199 485 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 564 (965)
Q Consensus 485 Divt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~ 564 (965)
|++||||+++|| +|+|++++++++++.+.. ..+++||++||++|++++++|++++++++.+++++++++|+++
T Consensus 250 di~t~~K~l~~G-~piga~~~~~~~~~~~~~------~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~ 322 (408)
T PRK04612 250 DIVTLAKALGGG-FPIGAMLAGPKVAETMQF------GAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAG 322 (408)
T ss_pred CEEEEcchhcCC-CceEEEEECHHHHhhhcC------CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 999999999998 899999999999887754 3578999999999999999999999899999999999999999
Q ss_pred HHcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 565 LTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 565 L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
|+++ .+++.+.+++|.|+|+++++. .+ ....+..+.+.|.++|+++.+.+ +.+||.||+++++++++++++++.
T Consensus 323 l~~l~~~~~~i~~vrg~Gl~~~i~~~-~~---~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~ 398 (408)
T PRK04612 323 LEALNAEFGVFAQVRGRGLMLGAVLA-PA---HAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLR 398 (408)
T ss_pred HHHHHhhCCCeeeeeccceEEEEEec-Cc---hhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHH
Confidence 9998 557888899999999999986 21 11234568888999999998876 899999999999999999999988
Q ss_pred ccccc
Q psy8199 643 QTFNE 647 (965)
Q Consensus 643 ~~~~~ 647 (965)
+++.+
T Consensus 399 ~~l~~ 403 (408)
T PRK04612 399 LALAD 403 (408)
T ss_pred HHHHH
Confidence 76643
No 49
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1.7e-60 Score=506.97 Aligned_cols=403 Identities=22% Similarity=0.288 Sum_probs=331.2
Q ss_pred ccccccccccccccccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhh
Q psy8199 211 SLIFNRQALHAYKLGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNK 285 (965)
Q Consensus 211 ~~~~~~~~Lha~~l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~ 285 (965)
+..+.+++...++-+.+.|.+..+... ..|+.+ +||||+|||+|||++.+|++..|||+||.|.+|+++|+++
T Consensus 7 S~~l~~~A~~~~pGGvnspvra~~~v~--~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~ 84 (432)
T COG0001 7 SEALFERAKKVIPGGVNSPVRAFKSVG--GYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER 84 (432)
T ss_pred hHHHHHHHhhhCCCCCCccccccCCCC--CCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh
Confidence 333445577777888888887777653 367766 9999999999999999999999999999999999999999
Q ss_pred ccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCcccccc
Q psy8199 286 LEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA 365 (965)
Q Consensus 286 ~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~ 365 (965)
+.. .+.+++...++++.+.+++| ..++|.|+||||||+..|||+||.| |+|++||.|+|+|||+++..+.
T Consensus 85 G~~---fg~Pte~Ei~~Aell~~~~p-~~e~vrfvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~lv 154 (432)
T COG0001 85 GLS---FGAPTELEVELAELLIERVP-SIEKVRFVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSLLV 154 (432)
T ss_pred cCC---CCCCCHHHHHHHHHHHHhcC-cccEEEEecchhHHHHHHHHHHHHh------hCCCeEEEEcCCCCCCccHHHh
Confidence 743 46789999999999999998 6799999999999999999999999 6999999999999999877765
Q ss_pred ccCCcCccchhcccCCCeeEecCCCCCCCCCCCCh--hHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChH
Q psy8199 366 VTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA--NEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSI 443 (965)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~ 443 (965)
-.+... . ....|.+.+.+.+... ..+++||++++++++++.++++||||+|| +.++.|.+.|.++
T Consensus 155 ~agsg~-~-----------t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEP-v~gn~g~i~p~~~ 221 (432)
T COG0001 155 KAGSGA-A-----------TLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEP-VAGNMGVVPPEPG 221 (432)
T ss_pred hcCcCc-c-----------cCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEecc-ccCCCCCCCCCHH
Confidence 433110 0 0001222222211111 13566999999999998889999999999 9999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCccccc
Q psy8199 444 YLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL 523 (965)
Q Consensus 444 ~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~ 523 (965)
||++|+++|++||++||+|||+||| |.+..++++++|++||+.||||.+||| +|+|++.+++++|+.+.. ..++.
T Consensus 222 Fl~~Lr~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGG-lP~ga~gGr~eiM~~~~p---~g~vy 296 (432)
T COG0001 222 FLEGLRELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIMEQLAP---LGPVY 296 (432)
T ss_pred HHHHHHHHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCC-cceeeeccHHHHHhhhCC---CCCcc
Confidence 9999999999999999999999999 888788999999999999999999999 799999999999998865 34577
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHcccCCCcee-eeeceeEEEEEEEeecCccc------
Q psy8199 524 HSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIEDPEQ------ 595 (965)
Q Consensus 524 ~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~i~-~v~g~G~~~~i~~~~~~~~~------ 595 (965)
+.+|++|||++++|+.++|+.+.+ +..++++.+++++|+++|+++....++. .+...|.|+.+.+...+...
T Consensus 297 qaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~ 376 (432)
T COG0001 297 QAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKR 376 (432)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHh
Confidence 899999999999999999999987 4589999999999999999884333343 78889999999887211111
Q ss_pred -hhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 596 -IETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 596 -~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
..+....+.+.|+++||++.|.. +..-++ ..+++++|++.++++.++.
T Consensus 377 sd~~~~~~~~~~~l~~GV~l~ps~~ea~flS--~ahte~di~~~~~a~~~~~ 426 (432)
T COG0001 377 SDVERFAKFFHHLLNRGVYLAPSQFEAGFLS--TAHTEEDIDRTLEAADEAF 426 (432)
T ss_pred hchHHHHHHHHHHHhCCcccCCccccceeee--cccCHHHHHHHHHHHHHHH
Confidence 01112245669999999999976 445566 6899999999999887544
No 50
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.6e-59 Score=532.74 Aligned_cols=387 Identities=21% Similarity=0.350 Sum_probs=317.3
Q ss_pred eEEEec-CCcccccccccchhccCCCCCHHHHH--HHHHHHhhccc--cccCCCCcHHHHHHHHHHHhhc-CCCCCeEEE
Q psy8199 246 SKLITF-SGKRYLDAISSWWVNLFGHSNSYINK--ALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLT-QYKLGHCFY 319 (965)
Q Consensus 246 ~~~~d~-dG~~ylD~~~~~~~~~lGh~~p~v~~--av~~~~~~~~~--~~~~~~~~~~~~~la~~l~~~~-~~~~~~v~~ 319 (965)
+||||. |||+|||+.+|+|+++|||+||+|++ |+++|++++.+ .+...+.++...+++++|++.. |.+.++|+|
T Consensus 36 ~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f 115 (443)
T PRK08297 36 SYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFF 115 (443)
T ss_pred CEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEE
Confidence 999995 99999999999999999999999999 99999988642 2334578899999999999988 557889999
Q ss_pred cCChhHHHHHHHHHHHHHHHh----cCC--CCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCC
Q psy8199 320 GSDGASAVEVALKMSFHYWYN----KGF--LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRN 393 (965)
Q Consensus 320 ~~sGseA~~~Al~~a~~~~~~----~g~--~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (965)
++|||||||.|+|+||+|+.. +|. ++|.+||+++++|||+|.+++++++...+...+.+.. +..++|.|....
T Consensus 116 ~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 194 (443)
T PRK08297 116 VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKF-DWPRIDNPKLRF 194 (443)
T ss_pred eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCC-CccccCCCCCCC
Confidence 999999999999999998642 464 4578999999999999999999987543222222221 222233332211
Q ss_pred CCCC---CChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCc
Q psy8199 394 INKG---NSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 470 (965)
Q Consensus 394 ~~~~---~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 470 (965)
...+ .....+..+|++++++++.++++++++||+|| +++++|.++||++||++|+++|++||+++|+|||||||||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EP-i~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGR 273 (443)
T PRK08297 195 PLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEP-IQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL 273 (443)
T ss_pred CCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence 1001 11345677899999999987778999999999 9999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccH
Q psy8199 471 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 550 (965)
Q Consensus 471 ~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~ 550 (965)
+|++|+++++|+.||++||||++ |+|++++.+++.+.+... ......|++||++||++|++|+++|++++++++
T Consensus 274 tG~~~a~~~~gv~PDiv~~gK~l-----~~~a~l~~~~i~~~~~~~-~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l 347 (443)
T PRK08297 274 TGTAWAYQQLGVRPDIVAFGKKT-----QVCGIMAGRRVDEVEDNV-FAVSSRINSTWGGNLVDMVRARRILEVIEEDGL 347 (443)
T ss_pred cchHHHHHhcCCCCCEEEecccc-----cccceecchHHHHhhhhh-ccCccccCCCCCccHHHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999997 345666666654432110 001124889999999999999999999998899
Q ss_pred HHHHHHHHHHHHHHHHcc-cCCCcee-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCc
Q psy8199 551 LQRISQDMKKITKALTSL-ITHPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPY 627 (965)
Q Consensus 551 ~~~~~~~~~~l~~~L~~l-~~~~~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~ 627 (965)
.+++++++++|+++|+++ .++|.+. +|+|.|+|+++++. + ......+.+.|+++||++.|.+ +.+||+||+
T Consensus 348 ~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~--~----~~~~~~~~~~l~~~Gvl~~~~~~~~lr~~P~l 421 (443)
T PRK08297 348 VENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLP--T----TADRDEVIRRLWEEGVLVLPCGERSIRFRPAL 421 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEec--C----HHHHHHHHHHHHHCCEEEecCCCCeEEEECCc
Confidence 999999999999999998 5677665 99999999999995 2 2234568889999999998865 789999999
Q ss_pred ccCHHHHHHHHHhhhcccc
Q psy8199 628 ILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~~~~ 646 (965)
++++++++++++++.+++.
T Consensus 422 ~~t~~eid~~l~~l~~~l~ 440 (443)
T PRK08297 422 TVTTEEIDAAIDALRRALP 440 (443)
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 9999999999999876653
No 51
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=3.1e-59 Score=535.40 Aligned_cols=387 Identities=27% Similarity=0.452 Sum_probs=334.9
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCC-CeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.+...+.++...+++++|++.+|... ++|+|++|||
T Consensus 46 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGs 125 (451)
T PRK06918 46 ALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGA 125 (451)
T ss_pred cEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcH
Confidence 999999999999999999999999999999999999999876655445678999999999999998555 6999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
||||.|+|+||.| ++|.+||+++++|||+|.+++++++. ..++..+.++.+++.++|+|+.++.+.+.....+
T Consensus 126 eA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (451)
T PRK06918 126 EAVENAVKIARKY------TKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQY 199 (451)
T ss_pred HHHHHHHHHHHHH------hCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHH
Confidence 9999999999998 58899999999999999999998874 3466667777778888888876655544434444
Q ss_pred HHHHHHHHHHHHHh--CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccC
Q psy8199 404 ARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 481 (965)
Q Consensus 404 ~~~d~~~le~~l~~--~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 481 (965)
....++.+++.+.. .++++||||+|| +++++|.++|+++|+++|+++|++||+++|+|||||||||+|.++++++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~iAavi~EP-i~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~ 278 (451)
T PRK06918 200 DDFMIEEFKNFFISEVAPETIAAVVMEP-VQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFD 278 (451)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEECc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcC
Confidence 44456666666532 356899999999 999999999999999999999999999999999999999999988999999
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 561 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l 561 (965)
+.||+++|||++++| +|+|++++++++++.+.. ..+++||++||++|++++++|++++++++.++++++++++
T Consensus 279 v~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~------~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l 351 (451)
T PRK06918 279 VVPDLITVSKSLGAG-VPISGVIGRKEIMDESAP------GELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVV 351 (451)
T ss_pred CCCCEEeeehhhcCC-CccEEEEEcHHHHhccCC------CCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 999999999999988 899999999999988754 3478999999999999999999998889999999999999
Q ss_pred HHHHHcc-cCCCceeeeeceeEEEEEEEeecCc---cchhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHHHH
Q psy8199 562 TKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP---EQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEI 634 (965)
Q Consensus 562 ~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~---~~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~~i 634 (965)
+++|+++ .+++.+..++|.|+|+++++. .+. .+....+..+.+.|.++||++.|.+ +++||+||++++++++
T Consensus 352 ~~~l~~l~~~~~~~~~vrg~G~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~i 430 (451)
T PRK06918 352 MNRFEEMKNKYNCIGDVRGLGAMCAFELV-QDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQL 430 (451)
T ss_pred HHHHHHHHhhCCCceeeccceeEEEEEEc-cCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHH
Confidence 9999988 467777899999999999985 221 1123346678888999999998854 7999999999999999
Q ss_pred HHHHHhhhccccc
Q psy8199 635 QHMTSAIFQTFNE 647 (965)
Q Consensus 635 ~~~~~~l~~~~~~ 647 (965)
+++++++.+.+..
T Consensus 431 d~~l~~l~~~l~~ 443 (451)
T PRK06918 431 EEGLTIIEESLQA 443 (451)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998876643
No 52
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=2.2e-59 Score=531.09 Aligned_cols=379 Identities=26% Similarity=0.390 Sum_probs=330.1
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCC-CCCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~v~~~~sGs 324 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.+...+.+++..+++++|++..|. +.++++|++|||
T Consensus 32 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGs 111 (421)
T PRK09792 32 ATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGA 111 (421)
T ss_pred cEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChH
Confidence 9999999999999999999999999999999999999998766554556899999999999998873 357999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCC-cCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
|||+.|+|+||.+ ++|.+|++++++|||+|.+++++++. ..++..+.++..++.++|+|...... .
T Consensus 112 eA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~-------~ 178 (421)
T PRK09792 112 EAVENAVKIARAH------TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGI-------S 178 (421)
T ss_pred HHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccc-------c
Confidence 9999999999988 68889999999999999999999875 34666677776777888887543211 1
Q ss_pred HHHHHHHHHHHHHhC--CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccC
Q psy8199 404 ARCAIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 481 (965)
Q Consensus 404 ~~~d~~~le~~l~~~--~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 481 (965)
..+|++++++++++. .+++++|++|| +++++|..++|++|+++|+++|++||+++|+|||+|||||+|++|++++++
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EP-vq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~ 257 (421)
T PRK09792 179 TQDSLDAIERLFKSDIEAKQVAAIIFEP-VQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYA 257 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcC
Confidence 346888999988742 46799999999 899999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 561 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l 561 (965)
+.||++||||+|+|| +|+|++++++++++.+.. ..+++||++||++|++++++|++++++++.++++++++++
T Consensus 258 ~~pDi~t~gK~l~~G-~pigav~~~~~i~~~~~~------~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l 330 (421)
T PRK09792 258 DKPDLMTMAKSLAGG-MPLSGVVGNANIMDAPAP------GGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRL 330 (421)
T ss_pred CCCcEEEeehhhcCC-CceEEEEEcHHHHhccCC------CCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999 799999999999988754 2478999999999999999999999888999999999999
Q ss_pred HHHHHcc-cCCCceeeeeceeEEEEEEEeecCc-cchhhHHHHHHHHHHHcCcEEeec---CCEEEEeCCcccCHHHHHH
Q psy8199 562 TKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP-EQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQH 636 (965)
Q Consensus 562 ~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~-~~~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~~~~t~~~i~~ 636 (965)
++.|+++ .++|.+..++|.|+|+++++...+. .+.......+.+.|+++||++.+. ++.+||.||++++++++++
T Consensus 331 ~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~ 410 (421)
T PRK09792 331 KNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDA 410 (421)
T ss_pred HHHHHHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHHHHHH
Confidence 9999998 5678888999999999999962111 111134567889999999998753 4799999999999999999
Q ss_pred HHHhhhccc
Q psy8199 637 MTSAIFQTF 645 (965)
Q Consensus 637 ~~~~l~~~~ 645 (965)
+++++.+++
T Consensus 411 ~~~~l~~~l 419 (421)
T PRK09792 411 AMKILQDAL 419 (421)
T ss_pred HHHHHHHHH
Confidence 999887654
No 53
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.2e-59 Score=515.54 Aligned_cols=343 Identities=29% Similarity=0.494 Sum_probs=305.7
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+.+ ..+.++...+++++|++.. +.++++|++||||
T Consensus 16 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~la~~l~~~~--~~~~v~~~~SGse 92 (364)
T PRK04013 16 IYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAG-PMFEHEEKEEMLEELSKWV--NYEYVYMGNSGTE 92 (364)
T ss_pred CEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCcc-CCcCCHHHHHHHHHHHhhc--CCCEEEEeCchHH
Confidence 899999999999999999999999999999999999999976554 3578999999999999987 4689999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|++.|+|+|+.+ ++|++||+++++|||++.+++++++.+.++..+.+..+++.++|++
T Consensus 93 A~e~Alklar~~------~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~---------------- 150 (364)
T PRK04013 93 AVEAALKFARLY------TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN---------------- 150 (364)
T ss_pred HHHHHHHHHHHH------hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC----------------
Confidence 999999999998 5789999999999999999999999887777777777777777664
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
|++++++.+. ++++||++|| +++++|.++++++|+++|+++|++||+++|+|||+||| |+|++|+++++++.||
T Consensus 151 -d~~~l~~~i~---~~~aAvivEp-i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PD 224 (364)
T PRK04013 151 -DVEAAKEAIT---KETAAVIFEP-IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPD 224 (364)
T ss_pred -CHHHHHHHhc---CCcEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCC
Confidence 5677887774 5799999999 99999999999999999999999999999999999999 9999999999999999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++|+||+|+|| +|+|+++.++++. . ..|++||++||++|++++++|++++++++.+++++. |
T Consensus 225 iv~~gK~lggG-~P~~a~~~~~~~~----~------~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l 286 (364)
T PRK04013 225 IVTMGKGIGNG-VPVSLTLTNFDVE----R------GKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------F 286 (364)
T ss_pred EEEecccccCC-ceeEEEEeccccc----C------CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------H
Confidence 99999999999 7999999987751 1 248899999999999999999999999999998874 2
Q ss_pred HcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 566 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 566 ~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
.++. .+.+.+|||.|+|+++++. .+ ...+.+.++++|+++.+.+ +++||.||+++++++++++++++.++
T Consensus 287 ~~l~-~~~v~~vRG~Gl~~gve~~-~~-------~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~ 357 (364)
T PRK04013 287 IEIK-GERVVTTRGRGLMIGIVLK-KP-------VGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGV 357 (364)
T ss_pred HHhc-cCcceeeeeCcEEEEEEeC-Cc-------HHHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 2332 2678899999999999996 11 3467888999999998876 79999999999999999999998876
Q ss_pred cc
Q psy8199 645 FN 646 (965)
Q Consensus 645 ~~ 646 (965)
+.
T Consensus 358 l~ 359 (364)
T PRK04013 358 IN 359 (364)
T ss_pred HH
Confidence 63
No 54
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-59 Score=576.16 Aligned_cols=382 Identities=22% Similarity=0.341 Sum_probs=326.1
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|. .++||+||+|++|+++|++++... ..+.++...+++++|++.+|.+.++|+|++||||
T Consensus 616 ~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~--~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsE 691 (1013)
T PRK06148 616 VWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNTN--TRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSE 691 (1013)
T ss_pred cEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCCc--CCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHH
Confidence 999999999999999984 789999999999999999986332 3578999999999999999877789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhccc-CCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSL-LNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
||+.|||+||.| ++|.+||+++++|||+|.+++++++.. ++..+.+. .+++..++.|+.++.+.+....++.
T Consensus 692 A~e~AlklAr~~------tGr~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 764 (1013)
T PRK06148 692 ANSLALRLARAH------TGQRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHG 764 (1013)
T ss_pred HHHHHHHHHHHh------cCCCeEEEEcCCccCCCcchhhcCchh-hcccCCCCCCCCceEcCCCCccccCCCCChhhhH
Confidence 999999999998 689999999999999999999998743 33333322 4556666777655554433333333
Q ss_pred HHHHHHHHHHHH---hCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-ccccccc
Q psy8199 405 RCAIFDLEILLK---KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHA 480 (965)
Q Consensus 405 ~~d~~~le~~l~---~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~ 480 (965)
..+.+++++.++ ..++++||||+|| +++++|.++||++||++|+++|++||+++|+|||||||||+|+ +|+++++
T Consensus 765 ~~~~~~l~~~i~~~~~~~~~iAAvI~EP-v~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~ 843 (1013)
T PRK06148 765 RRFAESVAEQIAAMAAKGRGPAFFIAES-IPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQ 843 (1013)
T ss_pred HHHHHHHHHHHHhhhccCCceEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhc
Confidence 444556666654 3356799999999 9999999999999999999999999999999999999999997 8999999
Q ss_pred CCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Q psy8199 481 EIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKK 560 (965)
Q Consensus 481 ~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~ 560 (965)
|+.||++|+||+|||| +|+|++++++++++.+..+ ..|++||+|||++|+|++++|++++++++.+++++++++
T Consensus 844 gv~PDivt~gK~lggG-~Plgav~~~~ei~~~~~~g-----~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~ 917 (1013)
T PRK06148 844 GVVPDIVTMGKPIGNG-HPMGAVVTTREIADSFDNG-----MEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNY 917 (1013)
T ss_pred CCCcceeeecccccCC-cceEEEEEcHHHHhhccCC-----CccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 9999999999999999 6999999999999988541 237799999999999999999999999999999999999
Q ss_pred HHHHHHcc-cCCCceeeeeceeEEEEEEEeecCcc---chhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHHH
Q psy8199 561 ITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNE 633 (965)
Q Consensus 561 l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~---~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~~ 633 (965)
|+++|+++ .++|.+.+|+|.|+|+++++. .+.. +....+..+.+.|+++||++.+.+ +++||.||+++++++
T Consensus 918 l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~-~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~ 996 (1013)
T PRK06148 918 LLAGLRELQDRFDIIGDVRGMGLFLGIELV-TDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRAD 996 (1013)
T ss_pred HHHHHHHHHHhCCCceEEeeeceEEEEEec-CCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHH
Confidence 99999998 678888999999999999996 3221 122345678899999999998644 899999999999999
Q ss_pred HHHHHHhhhcccc
Q psy8199 634 IQHMTSAIFQTFN 646 (965)
Q Consensus 634 i~~~~~~l~~~~~ 646 (965)
++++++++.+++.
T Consensus 997 id~~l~~l~~~l~ 1009 (1013)
T PRK06148 997 ADHLLEVLDDVLA 1009 (1013)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887654
No 55
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=4.8e-59 Score=526.81 Aligned_cols=370 Identities=28% Similarity=0.428 Sum_probs=319.9
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhc--CCCCC-eEEE-cC
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT--QYKLG-HCFY-GS 321 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~--~~~~~-~v~~-~~ 321 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|+++..+.+...+.++...+|+++|++.. |.+.. +++| ++
T Consensus 27 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 106 (412)
T TIGR02407 27 STLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGP 106 (412)
T ss_pred CEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCC
Confidence 99999999999999999999999999999999999999876554444567899999999999985 32233 5666 59
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChh
Q psy8199 322 DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN 401 (965)
Q Consensus 322 sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (965)
|||||||.|+|+||.| ++|.+||+++++|||+|.+++++++.+.++..+.+..+++.++|+|+....
T Consensus 107 sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~------- 173 (412)
T TIGR02407 107 TGTNAVESALKLARKV------TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGG------- 173 (412)
T ss_pred CchHHHHHHHHHHhhh------cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCcccc-------
Confidence 9999999999999998 588999999999999999999999877777777766677778777643211
Q ss_pred HHHHHHHHHHHHHHHhCC---CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccc
Q psy8199 402 EIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE 478 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~~---~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 478 (965)
..++++.+++++.++. +++++||+|| +++++|.++||++||++|+++|++||+++|+|||||||||+|++|+++
T Consensus 174 --~~~~~~~l~~~~~~~~~~~~~~aavi~Ep-i~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~ 250 (412)
T TIGR02407 174 --DVDTIAYFEKLLEDSSSGVDLPAAVILET-VQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFE 250 (412)
T ss_pred --chhHHHHHHHHHHhccCCCCceEEEEecc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhc
Confidence 1357888999887542 5789999999 999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcceeeeccccCC-CcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH-HhcccHHHHHHH
Q psy8199 479 HAEIWPDFLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI-FNKDNILQRISQ 556 (965)
Q Consensus 479 ~~~~~pDivt~sK~l~g-G~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~-~~~~~~~~~~~~ 556 (965)
++++.||+++|||+|+| | +|+|++++++++ +.+.. ..|++||++||++|+++.++|+. ++++++.+++++
T Consensus 251 ~~~v~PDi~~~~K~lg~~G-~pigav~~~~~~-~~~~~------~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~ 322 (412)
T TIGR02407 251 PAGIEPDIVCLSKSISGYG-LPLALTLIKPEL-DVWKP------GEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQR 322 (412)
T ss_pred ccCCCCCEEEechhccCCc-cceeEEEEchhh-hccCC------CccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 99999999999999999 7 799999999886 55532 35889999999999999999995 777889999999
Q ss_pred HHHHHHHHHHcc-cCCC-ceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec---CCEEEEeCCcccCH
Q psy8199 557 DMKKITKALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNK 631 (965)
Q Consensus 557 ~~~~l~~~L~~l-~~~~-~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~~~~t~ 631 (965)
++++++++|+.+ .+++ .+..+++.|+|+++++. + ...+..+...|+++||++.+. ++.|||+||+++++
T Consensus 323 ~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~--~----~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~ 396 (412)
T TIGR02407 323 KSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECG--D----GDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDE 396 (412)
T ss_pred HHHHHHHHHHHHHhhCCCceEeeecceeEEEEEec--C----hHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCH
Confidence 999999999987 5566 46799999999999996 2 223557888999999999764 37999999999999
Q ss_pred HHHHHHHHhhhccc
Q psy8199 632 NEIQHMTSAIFQTF 645 (965)
Q Consensus 632 ~~i~~~~~~l~~~~ 645 (965)
++++++++++.+++
T Consensus 397 ~~i~~~~~~l~~~l 410 (412)
T TIGR02407 397 ETLQQGLDILEQAV 410 (412)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987655
No 56
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=8.6e-59 Score=527.55 Aligned_cols=373 Identities=28% Similarity=0.406 Sum_probs=320.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhc--CCCCC-eEEE-cC
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT--QYKLG-HCFY-GS 321 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~--~~~~~-~v~~-~~ 321 (965)
+||||.|||+|||+.+|+|+++|||+||+|.+|+++|+++..+.+...+.++...+|+++|++.+ |.+.+ +++| ++
T Consensus 31 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 110 (425)
T PRK09264 31 SWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGP 110 (425)
T ss_pred CEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCC
Confidence 99999999999999999999999999999999999999876555444567889999999999975 32344 6766 58
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChh
Q psy8199 322 DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN 401 (965)
Q Consensus 322 sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (965)
|||||||.|+|+||.| ++|.+||+++++|||+|.+++++++++.++..+.+..+++.++|+|.+...
T Consensus 111 sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~------- 177 (425)
T PRK09264 111 TGTNAVEAALKLARKV------TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGG------- 177 (425)
T ss_pred CHHHHHHHHHHHHHHh------cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCcccc-------
Confidence 9999999999999998 688999999999999999999999877777667776677888888753221
Q ss_pred HHHHHHHHHHHHHHHhCC---CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccc
Q psy8199 402 EIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE 478 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~~---~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 478 (965)
..+|+++++++++++. +++++||+|| +++++|+++++++||++|+++|++||+++|+|||||||||+|++|+++
T Consensus 178 --~~~~~~~l~~~l~~~~~~~~~~aavi~Ep-v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~ 254 (425)
T PRK09264 178 --DVDTLAYLEKLLEDSSSGVDLPAAVIVET-VQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFE 254 (425)
T ss_pred --chhHHHHHHHHHHhccCCCCceEEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHh
Confidence 2368889999997542 5799999999 999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHH-HHHhcccHHHHHHHH
Q psy8199 479 HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATL-EIFNKDNILQRISQD 557 (965)
Q Consensus 479 ~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L-~~~~~~~~~~~~~~~ 557 (965)
++++.||++||||+|++|++|+|++++++++ ..+.. ..+++||++||++|++++++| ++++++++.++++++
T Consensus 255 ~~~v~PDi~t~~K~l~~~G~pigav~~~~~i-~~~~~------~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~ 327 (425)
T PRK09264 255 RAGITPDIVTLSKSISGYGLPMALVLIKPEL-DVWKP------GEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAK 327 (425)
T ss_pred hcCCCCCEEEeccccCCCccceEEEEEchhh-hccCC------CccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 9999999999999999933799999999887 34432 347899999999999999999 666777899999999
Q ss_pred HHHHHHHHHcc-cCCCc-eeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHH
Q psy8199 558 MKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKN 632 (965)
Q Consensus 558 ~~~l~~~L~~l-~~~~~-i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~ 632 (965)
+++|+++|+++ .++|. +..+++.|+|+++++. + ......+.+.++++||++.+.+ +.|||+||++++++
T Consensus 328 g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~--~----~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ 401 (425)
T PRK09264 328 GELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFG--D----GELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEE 401 (425)
T ss_pred HHHHHHHHHHHHHhCCCceecceecccEEEEEec--C----hHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHH
Confidence 99999999887 45664 3689999999999985 2 2335578889999999998754 79999999999999
Q ss_pred HHHHHHHhhhccccc
Q psy8199 633 EIQHMTSAIFQTFNE 647 (965)
Q Consensus 633 ~i~~~~~~l~~~~~~ 647 (965)
+++++++++.+++..
T Consensus 402 ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 402 ELEEGLDILEEAVAE 416 (425)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999876543
No 57
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=2.2e-58 Score=521.80 Aligned_cols=365 Identities=29% Similarity=0.468 Sum_probs=323.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.. .++.+++..+|+++|++..+ .++++|++||+|
T Consensus 27 ~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~L~~~~~--~~~~~f~~SGse 103 (397)
T TIGR03246 27 SRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIG-NGYTNEPVLRLAKKLVDATF--ADKVFFCNSGAE 103 (397)
T ss_pred CEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccccc-CccCCHHHHHHHHHHHhhCC--CCEEEEeCCcHH
Confidence 999999999999999999999999999999999999999864433 34678889999999999884 579999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||+.|+|+||.|++.++.++|.+||+++++|||++.+++++++.+.++..+.+..+++.++|.
T Consensus 104 A~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 166 (397)
T TIGR03246 104 ANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY----------------- 166 (397)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----------------
Confidence 999999999999776655788999999999999999999999876666666776667666665
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
+|++++++++. +++++|++|| +++++|.++|+++||++|+++|++||+++|+|||||||||+|.+++++++++.||
T Consensus 167 ~d~~~l~~~l~---~~~aavi~Ep-i~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pD 242 (397)
T TIGR03246 167 NDLAAAKALIS---DKTCAVIVEP-IQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD 242 (397)
T ss_pred CCHHHHHHHhc---cCeEEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCC
Confidence 47888998884 4699999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++|+||+++|| +|+|++++++++++.+.. ..+++||++||++|++++++|+.++++++.+++++++++|+++|
T Consensus 243 i~t~~K~lggG-~pigav~~~~~i~~~~~~------~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L 315 (397)
T TIGR03246 243 ILTSAKALGGG-FPIGAMLTTTEIAAHLKV------GTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGL 315 (397)
T ss_pred EEEeehhhhCC-cceeEEEEcHHHHHhccC------CCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 99999999988 799999999999998854 34788999999999999999999988889999999999999999
Q ss_pred Hcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 566 TSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 566 ~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+++ .+++.+..+++.|+|+++++. .+ ....+..+++.|+++|+++.+.+ +++||+||+.+++++++++++++.+
T Consensus 316 ~~l~~~~~~~~~vrg~G~~~~i~~~-~~---~~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~ 391 (397)
T TIGR03246 316 EKINARYNVFSEIRGKGLLIGAVLT-EA---YQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFER 391 (397)
T ss_pred HHHHhcCCCeEeeecCceEEEEEEc-Cc---hhhHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 987 556777899999999999986 11 11235578889999999998765 7999999999999999999999876
Q ss_pred cc
Q psy8199 644 TF 645 (965)
Q Consensus 644 ~~ 645 (965)
.+
T Consensus 392 ~l 393 (397)
T TIGR03246 392 AI 393 (397)
T ss_pred HH
Confidence 54
No 58
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.6e-58 Score=518.99 Aligned_cols=361 Identities=27% Similarity=0.427 Sum_probs=310.1
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.|||+||||.+|+|+.+|||+||+|++|+++|++++.+.+ ..+.+++..+|+++|.+.. +.++++|++||+|
T Consensus 28 ~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~-~~~~~~~~~~la~~l~~~~--~~~~v~f~~SGse 104 (395)
T PRK03715 28 SWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPS-PAFYNEPMAKLAGLLTQHS--CFDKVFFANSGAE 104 (395)
T ss_pred CEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccccc-ccccCHHHHHHHHHHhhcc--CCCEEEEeCCcHH
Confidence 899999999999999999999999999999999999998875543 3466889999999999875 4689999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||+.|+|+++.|+. ++.+++.+||+++++|||++.+++++++.+.++..+.+..+++.+.+.
T Consensus 105 A~e~Aik~ar~~~~-~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~----------------- 166 (395)
T PRK03715 105 ANEGAIKLARKWGR-KHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAEL----------------- 166 (395)
T ss_pred HHHHHHHHHHHHhh-ccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCC-----------------
Confidence 99999999998854 334678899999999999999999999877666666555544444332
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
+|++++++++. +++++|++|| +++++|.++|+++|+++|+++|++||+++|+|||||||||+|++|+++++++.||
T Consensus 167 ~d~~~l~~~l~---~~~aavi~Ep-v~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD 242 (395)
T PRK03715 167 NDIASVEKLIT---DKTVAVMLEP-VQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD 242 (395)
T ss_pred chHHHHHHHcC---CCceEEEEeC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc
Confidence 57888988884 4689999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++||||+|+|| +|+|+++++++++. +.. ..|++||++||++|++++++|++++++++.+++++++++|+++|
T Consensus 243 i~t~gK~lg~G-~p~~av~~~~~i~~-~~~------~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L 314 (395)
T PRK03715 243 IMTLGKGIGGG-VPLAALLAKAEVAV-FEA------GDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKL 314 (395)
T ss_pred eeeehhhhhCC-cceEEEEEcccccc-ccC------CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 99999999999 79999999999863 322 24789999999999999999999998899999999999999999
Q ss_pred HcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHc---CcEEeec-CCEEEEeCCcccCHHHHHHHHHhh
Q psy8199 566 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN---ELLLRPI-GNTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 566 ~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~---Gi~~~~~-~~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
+++.....+..++|.|+|+++++. + .....+.+.+.+. |+++.+. ++++||+||+++|+++++++++++
T Consensus 315 ~~l~~~~~i~~vrG~Glm~~i~l~--~-----~~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l 387 (395)
T PRK03715 315 LELSEERGLEGERGEGLLRALLLG--K-----DIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAML 387 (395)
T ss_pred HHHhhcCCcCeEEcceeEEEEEec--C-----chHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHH
Confidence 988433347789999999999996 2 1122344444445 9998754 579999999999999999999998
Q ss_pred hcccc
Q psy8199 642 FQTFN 646 (965)
Q Consensus 642 ~~~~~ 646 (965)
.+++.
T Consensus 388 ~~~l~ 392 (395)
T PRK03715 388 RSVLD 392 (395)
T ss_pred HHHHH
Confidence 76553
No 59
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=3.8e-58 Score=514.75 Aligned_cols=363 Identities=28% Similarity=0.462 Sum_probs=323.4
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.+. .+.++...+++++|++..+ .++|+|++||||
T Consensus 7 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~~~v~f~~sGse 83 (382)
T PLN00144 7 CKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSN-VYHTIPQVELAKRLVASSF--ADRVFFCNSGTE 83 (382)
T ss_pred cEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccc-cccCHHHHHHHHHHHhcCC--CCeEEEeCCcHH
Confidence 7999999999999999999999999999999999999998766543 3568899999999999874 579999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCC-------ceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCC
Q psy8199 326 AVEVALKMSFHYWYNKGFLN-------KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGN 398 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~-------~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (965)
|+|.|+|+||.|+..++... +.+||+++++|||+|.+++++++...++..+.+..+++.++|+
T Consensus 84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~---------- 153 (382)
T PLN00144 84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY---------- 153 (382)
T ss_pred HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC----------
Confidence 99999999999976554432 5789999999999999999999987777777777777777766
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccc
Q psy8199 399 SANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE 478 (965)
Q Consensus 399 ~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 478 (965)
+|+++|++++. .+++++|++|| ++|++|+..++++|+++|+++|++||+++|+|||||||||+|.+++++
T Consensus 154 -------~d~~~l~~~~~--~~~~aavi~eP-~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~ 223 (382)
T PLN00144 154 -------GNLEAARKLIQ--KGKTAAVFVEP-VQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHE 223 (382)
T ss_pred -------CCHHHHHHhcC--CCCeEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhh
Confidence 36788888875 45799999999 799999999999999999999999999999999999999999999998
Q ss_pred ccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHH
Q psy8199 479 HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDM 558 (965)
Q Consensus 479 ~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~ 558 (965)
++++.||++||||+|++| +|+|++++++++++.+.. ..+++||++||++|++++++|++++++++.+++++++
T Consensus 224 ~~~~~PDi~t~sK~l~~G-~pig~v~~~~~~~~~~~~------~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g 296 (382)
T PLN00144 224 AYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINP------GDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKG 296 (382)
T ss_pred hcCCCCCEEEecccccCC-cceEEEEEcHHHHhccCC------CCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 999999999999999999 799999999999988854 3478999999999999999999999889999999999
Q ss_pred HHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC--CEEEEeCCcccCHHHHH
Q psy8199 559 KKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQ 635 (965)
Q Consensus 559 ~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~lR~~p~~~~t~~~i~ 635 (965)
+++++.|+++ .++|.+..+++.|+|+++++. .. +..+...++++||++.|.+ +.+||+||+++++++++
T Consensus 297 ~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~-~~-------~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~ 368 (382)
T PLN00144 297 EYLRELLRRKLGGNPHVKEVRGVGLLVGIQLD-VP-------AGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELE 368 (382)
T ss_pred HHHHHHHHHHHhhCCCceeeecCceEEEEEec-Cc-------cHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHH
Confidence 9999999886 677888899999999999984 11 2467888999999998864 79999999999999999
Q ss_pred HHHHhhhcccc
Q psy8199 636 HMTSAIFQTFN 646 (965)
Q Consensus 636 ~~~~~l~~~~~ 646 (965)
++++++.+++.
T Consensus 369 ~~~~~l~~~l~ 379 (382)
T PLN00144 369 QAVEILADCLP 379 (382)
T ss_pred HHHHHHHHHHH
Confidence 99999877654
No 60
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=7.9e-58 Score=519.51 Aligned_cols=363 Identities=19% Similarity=0.261 Sum_probs=307.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+ .++.++...+++++|++.+| +.++|+|++||||
T Consensus 45 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGse 120 (428)
T PRK12389 45 AYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVL---YGTPTELEIEFAKMLKEAIP-SLEKVRFVNSGTE 120 (428)
T ss_pred CEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc---cCCCCHHHHHHHHHHHHhCC-CCcEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998643 34678999999999999987 6789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccc------hh-cccCCCeeEecCCCCCCCCCCC
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE------IY-TSLLNKTYIITTPDSRNINKGN 398 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~ 398 (965)
|++.|+|+||.| ++|.+||.++++|||++.++++.++...++. .+ .+..+++..+|.
T Consensus 121 A~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 184 (428)
T PRK12389 121 AVMTTIRVARAY------TGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF---------- 184 (428)
T ss_pred HHHHHHHHHHHh------hCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC----------
Confidence 999999999998 5899999999999999999999887432211 00 011123333332
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccc
Q psy8199 399 SANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE 478 (965)
Q Consensus 399 ~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 478 (965)
+|+++++++++++.+++++||+|| +++++|.++|+++||++|+++|++||+++|+|||+||| |+|.+++++
T Consensus 185 -------~d~~~l~~~l~~~~~~vaavi~EP-v~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~ 255 (428)
T PRK12389 185 -------NDIEALKEALDKWGDEVAAVLVEP-IVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQD 255 (428)
T ss_pred -------CCHHHHHHHHHhcCCcEEEEEEeC-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhH
Confidence 478889999977667899999999 99999999999999999999999999999999999999 998888899
Q ss_pred ccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHH
Q psy8199 479 HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDM 558 (965)
Q Consensus 479 ~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~ 558 (965)
++|+.||++|+||+|+|| +|+|++++++++++.+... ....|++||++||++|||++++|++++++++.+++++++
T Consensus 256 ~~gv~PDivt~gK~lggG-~Pi~av~~~~~i~~~~~~~---~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g 331 (428)
T PRK12389 256 LLGVEPDLTALGKIIGGG-LPIGAYGGRKDIMEQVAPL---GPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLG 331 (428)
T ss_pred HhCCCCCeeeechhhcCC-CceeEEeEHHHHHhhhccC---CCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 999999999999999999 7999999999999988531 224688999999999999999999999889999999999
Q ss_pred HHHHHHHHcc-cCCCceeee-eceeEEEEEEEeecCccc--------hhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCc
Q psy8199 559 KKITKALTSL-ITHPKIINF-RQKGMIWAFDVIIEDPEQ--------IETFSKKFFVAALKNELLLRPIG-NTVYLMPPY 627 (965)
Q Consensus 559 ~~l~~~L~~l-~~~~~i~~v-~g~G~~~~i~~~~~~~~~--------~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~ 627 (965)
++|+++|+++ .+++.+..+ ++.| ++++++. .+... .......+.+.|+++||++.+.+ +. +.||+
T Consensus 332 ~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--~~~~l 407 (428)
T PRK12389 332 AMLEEGILEAAEKHGITITINRLKG-ALTVYFT-DEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKYEA--WFLTT 407 (428)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEe-CCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCCCC--eeecC
Confidence 9999999988 557766655 7777 7788886 22110 11234578889999999998754 23 46899
Q ss_pred ccCHHHHHHHHHhhhccc
Q psy8199 628 ILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~~~ 645 (965)
++++++++++++++++++
T Consensus 408 ~~t~e~id~~~~~l~~~l 425 (428)
T PRK12389 408 AHTEEDIEETLEAVDRAF 425 (428)
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 999999999999987655
No 61
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=3.2e-57 Score=514.33 Aligned_cols=384 Identities=22% Similarity=0.320 Sum_probs=314.5
Q ss_pred eEEEec-CCcccccccccchhccCCCCCHHHH--HHHHHHHhhccc--cccCCCCcHHHHHHHHHHHhhc-CCCCCeEEE
Q psy8199 246 SKLITF-SGKRYLDAISSWWVNLFGHSNSYIN--KALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLT-QYKLGHCFY 319 (965)
Q Consensus 246 ~~~~d~-dG~~ylD~~~~~~~~~lGh~~p~v~--~av~~~~~~~~~--~~~~~~~~~~~~~la~~l~~~~-~~~~~~v~~ 319 (965)
+||||. |||+|||+.+|+|+.+|||+||+|+ +|+++|++++.+ .+...+.++...+++++|++.. +.++++|+|
T Consensus 29 ~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f 108 (431)
T TIGR03251 29 SVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFF 108 (431)
T ss_pred CEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEE
Confidence 999996 9999999999999999999999999 999999988643 2333577888999999999987 556789999
Q ss_pred cCChhHHHHHHHHHHHHHHH----hcCCCC--ceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCC
Q psy8199 320 GSDGASAVEVALKMSFHYWY----NKGFLN--KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRN 393 (965)
Q Consensus 320 ~~sGseA~~~Al~~a~~~~~----~~g~~~--~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (965)
++|||||||.|+|+||.|+. .+|+++ |.+||.++++|||+|.+++++++...++..+.+.. +..+++.|...+
T Consensus 109 ~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~-~~~~~~~p~~~~ 187 (431)
T TIGR03251 109 IEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKF-DWPRIDNPKLTF 187 (431)
T ss_pred eCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCC-CCccCCCCcccC
Confidence 99999999999999999863 345543 67899999999999999999998654444443332 222334443211
Q ss_pred CC--CC-CChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCc
Q psy8199 394 IN--KG-NSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 470 (965)
Q Consensus 394 ~~--~~-~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 470 (965)
.. .. .....+..++++++++.+..+++++||||+|| +++++|.++||++||++|+++|++||+++|+|||||||||
T Consensus 188 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEP-v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Gr 266 (431)
T TIGR03251 188 PLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEP-IQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGL 266 (431)
T ss_pred CccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEec-cccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCc
Confidence 10 01 11344667889999999987778999999999 9999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccH
Q psy8199 471 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 550 (965)
Q Consensus 471 ~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~ 550 (965)
+|.+|+++++|+.||++|+||++ |+++++..+++.+.+..... ....+++||++||++|++++++|++++++++
T Consensus 267 tG~~~a~~~~gv~PDi~~~gK~~-----~~~g~~~~~~i~~~~~~~~~-~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l 340 (431)
T TIGR03251 267 TGTAWAYQQLGVQPDIVAFGKKT-----QVCGIMAGRRVDEVADNVFA-VPSRLNSTWGGNLVDMVRATRILEIIEEERL 340 (431)
T ss_pred cchHHHHHhcCCCCCEEEecccC-----ccceEEecchHHHhhhhccc-CccccCCCCCCCHHHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999986 45556666654332210000 1124789999999999999999999988889
Q ss_pred HHHHHHHHHHHHHHHHcc-cCCC-ceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCc
Q psy8199 551 LQRISQDMKKITKALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPY 627 (965)
Q Consensus 551 ~~~~~~~~~~l~~~L~~l-~~~~-~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~ 627 (965)
.+++++++++|+++|+++ .+++ .+.+++|.|+|+++++. + ......+.+.|+++||++.+.+ +.+||+||+
T Consensus 341 ~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~--~----~~~~~~~~~~l~~~Gvl~~~~g~~~lr~~P~l 414 (431)
T TIGR03251 341 VDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLP--S----TADRDEVIRQLYREGVLLLGCGERSIRFRPPL 414 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeC--C----HHHHHHHHHHHHhCCeEEecCCCCeEEEECCc
Confidence 999999999999999987 5677 67899999999999985 2 2234568889999999998866 789999999
Q ss_pred ccCHHHHHHHHHhhhc
Q psy8199 628 ILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~ 643 (965)
++++++++++++++.+
T Consensus 415 ~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 415 TVTREEIDAAIDAIRR 430 (431)
T ss_pred cCCHHHHHHHHHHHHh
Confidence 9999999999998764
No 62
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=1e-58 Score=510.05 Aligned_cols=329 Identities=36% Similarity=0.621 Sum_probs=293.0
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+++|+++|||+||+|.+|+++|++++.+.+...+.++...+|+++|.+.+|.+.++|+|++||||
T Consensus 8 ~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGse 87 (339)
T PF00202_consen 8 AYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSE 87 (339)
T ss_dssp TEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHH
T ss_pred CEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchH
Confidence 79999999999999999999999999999999999999998777667899999999999999999878899999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|||.|+|+|++|+..++.++|.+|++++++|||+|.+++++++++.++..+.+...++.++|.|.... +.+..
T Consensus 88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~~~~~ 160 (339)
T PF00202_consen 88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA-------DEEEQ 160 (339)
T ss_dssp HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH-------HHHHH
T ss_pred HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch-------hhhHH
Confidence 99999999998877777789999999999999999999999998888888888888888888874321 22333
Q ss_pred HHHHHHHHHHHh-CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCc
Q psy8199 406 CAIFDLEILLKK-NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 484 (965)
Q Consensus 406 ~d~~~le~~l~~-~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 484 (965)
..++++++.+.+ ..++++|||+|| +++++|.+.++++||++|+++|++||+++|+|||+|||||+|++|+++++|+.|
T Consensus 161 ~~~~~~~~~~~~~~~~~iaavivEP-i~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~P 239 (339)
T PF00202_consen 161 ACLNALEELIAALNADEIAAVIVEP-IQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDP 239 (339)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEES-SBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSS
T ss_pred HHHHHHHHHHHhhcCCcEEEEEEec-cccccCccccccchhhehcccccccccceecccccccccccCCccceecccccC
Confidence 445555554433 367899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Q psy8199 485 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 564 (965)
Q Consensus 485 Divt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~ 564 (965)
|++|+||+++|| +|+|++++++++++.+.. ..|++||++||++|++++++|++++++++.+++++++++|+++
T Consensus 240 Div~~gK~l~gG-~p~sav~~~~~i~~~~~~------~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~ 312 (339)
T PF00202_consen 240 DIVTFGKGLGGG-LPISAVLGSEEIMEAFQP------GSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREG 312 (339)
T ss_dssp SEEEEEGGGGTT-SSEEEEEEEHHHHTTSCT------TSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred cccccccchhhh-hhcccccccchhhccccc------cccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHH
Confidence 999999999999 899999999999998854 2389999999999999999999999999999999999999999
Q ss_pred HHcc-cCCCceeeeeceeEEEEEEEe
Q psy8199 565 LTSL-ITHPKIINFRQKGMIWAFDVI 589 (965)
Q Consensus 565 L~~l-~~~~~i~~v~g~G~~~~i~~~ 589 (965)
|+++ .+++.+..|+|.|+|+++++.
T Consensus 313 L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 313 LRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred HHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 9999 556899999999999999985
No 63
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=3.2e-57 Score=513.62 Aligned_cols=397 Identities=21% Similarity=0.241 Sum_probs=311.6
Q ss_pred cccccccccccccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccc
Q psy8199 214 FNRQALHAYKLGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH 288 (965)
Q Consensus 214 ~~~~~Lha~~l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~ 288 (965)
+.+.+.+..+-+..++........ +.|+.+ +||||+|||+|||+.+|+|+.+|||+||+|.+|+++|++++.+
T Consensus 56 l~~ra~~~~pgGv~~~~r~~~~~~--~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~ 133 (474)
T PLN02482 56 IFKAAKELMPGGVNSPVRAFKSVG--GQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS 133 (474)
T ss_pred HHHHHHhhCCCCCCCcchhhcccC--CCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC
Confidence 334455555555555554332211 245544 9999999999999999999999999999999999999998753
Q ss_pred cccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCcccccc--c
Q psy8199 289 VMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA--V 366 (965)
Q Consensus 289 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~--~ 366 (965)
.+.+++...+|+++|++.+| +.++|+|++|||||++.|+|+||.| ++|.+||.++++|||++...+. .
T Consensus 134 ---~~~~~~~~~~lAe~l~~~~p-~~~~v~f~~SGsEA~e~AlklAR~~------tgr~~Ii~~~g~YHG~~~~~~~~~~ 203 (474)
T PLN02482 134 ---FGAPCLLENVLAEMVIDAVP-SVEMVRFVNSGTEACMGVLRLARAY------TGREKIIKFEGCYHGHADSFLVKAG 203 (474)
T ss_pred ---CCCCCHHHHHHHHHHHHhCC-CCCEEEEeCChHHHHHHHHHHHHHh------cCCCEEEEECCccCCCcchhhhhcC
Confidence 34578899999999999998 5899999999999999999999998 6899999999999998754332 2
Q ss_pred cCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHH
Q psy8199 367 TNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLK 446 (965)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~ 446 (965)
++...... +..++....+.+ ....+.+||+++|+++++++.+++++||+|| +++++|.++|+++||+
T Consensus 204 ~~~~~~~~---~~~~g~~~~~~~---------~~~~~~~nd~~~l~~~l~~~~~~iAavI~Ep-v~g~~G~i~p~~~fl~ 270 (474)
T PLN02482 204 SGVATLGL---PDSPGVPKAATS---------ATLTAPYNDLEAVKKLFEANKGEIAAVILEP-VVGNSGFIVPKKEFLE 270 (474)
T ss_pred CCccccCC---CCCCCCCCCCCC---------CeEEecCCChHHHHHHHHhCCCceEEEEECC-CCCCCCCcCCCHHHHH
Confidence 22111110 111111000000 0011334688999999987778899999999 9999999999999999
Q ss_pred HHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccC
Q psy8199 447 LVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 447 ~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~ 526 (965)
+|+++|++||+++|+|||+||| |+|.+|+++++|+.||++||||+|+|| +|+|++++++++++.+.. ...+.|++
T Consensus 271 ~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG-~Pigav~g~~ei~~~~~~---~~~~~~~~ 345 (474)
T PLN02482 271 GLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAP---AGPMYQAG 345 (474)
T ss_pred HHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCC-CceEEEEEcHHHHHhhcc---CCCccccc
Confidence 9999999999999999999999 999999999999999999999999999 799999999999998863 12367899
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcc-cCC--Cce-eeeeceeEEEEEEEeecCcc--------
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITH--PKI-INFRQKGMIWAFDVIIEDPE-------- 594 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~--~~i-~~v~g~G~~~~i~~~~~~~~-------- 594 (965)
||++||++|++++++|++++++++++++++++++|+++|+++ .++ |.+ ..+++ |+++++. .+..
T Consensus 346 T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g---~~gi~f~-~~~~~~~~~~~~ 421 (474)
T PLN02482 346 TLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG---MFGFFFT-EGPVYNFADAKK 421 (474)
T ss_pred CcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce---EEEEEEe-cCCccChhhhcc
Confidence 999999999999999999988899999999999999999988 443 332 23333 7777775 2210
Q ss_pred chhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 595 QIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 595 ~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
........+.+.|+++||++.+.+...+ .||+.+|+++|+++++++.+++
T Consensus 422 ~d~~~~~~~~~~l~~~Gv~~~~~~~~~~-~psl~ht~~dId~~l~al~~~l 471 (474)
T PLN02482 422 SDTAKFARFHRGMLEEGVYLAPSQFEAG-FTSLAHTEEDIDFTIAAAERVL 471 (474)
T ss_pred CCHHHHHHHHHHHHHCCeEEeccCCCCC-cCCCCCCHHHHHHHHHHHHHHH
Confidence 1112344678889999999987542122 4999999999999999988654
No 64
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=1.1e-56 Score=509.43 Aligned_cols=366 Identities=27% Similarity=0.422 Sum_probs=323.1
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+++|||+||+|++|+++|++++.+.. ..+.++...+|+++|++..+ .++|+|++||+|
T Consensus 31 ~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGse 107 (406)
T PRK12381 31 SRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTG-NGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAE 107 (406)
T ss_pred CEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhccccc-CccCCHHHHHHHHHHHhhCC--CCeEEEcCCcHH
Confidence 999999999999999999999999999999999999998865443 35678889999999999874 579999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||+.|+|+||.|+..++.+++.+|+.++++|||++.+++++++.+.++..+.++.+++.++|.
T Consensus 108 A~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 170 (406)
T PRK12381 108 ANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY----------------- 170 (406)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-----------------
Confidence 999999999999776666788999999999999999999999977777666666666655554
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
+|++++++.+. +++++|++|| +++++|+++|+++|+++|+++|++||+++|+||||+||||+|++++++++++.||
T Consensus 171 ~d~~~l~~~l~---~~~aaviiEP-v~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD 246 (406)
T PRK12381 171 NDLNSASALID---DQTCAVIVEP-IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD 246 (406)
T ss_pred CCHHHHHHhcc---CCeeEEEEeC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC
Confidence 36788888884 4799999999 9999999999999999999999999999999999999999999888889999999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++||||+++|| +|+|++++++++++.+.. ..+++||++||++|++++++|++++++++.++++++++++.++|
T Consensus 247 i~t~sK~l~gG-~~ig~~~~~~~~~~~~~~------~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L 319 (406)
T PRK12381 247 VLTTAKALGGG-FPIGAMLTTEKCASVMTV------GTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERL 319 (406)
T ss_pred EEEehhhhhCC-CceEEEEEcHHHHhhcCC------CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 99999999988 899999999999988854 35789999999999999999999988889999999999999999
Q ss_pred Hcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 566 TSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 566 ~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+++ .+++.+..+++.|+|+++++. .+ ....+..+.+.|+++||++.+.+ +.+||+||+++++++++++++++.+
T Consensus 320 ~~l~~~~~~~~~vrg~Gl~~~~~l~-~~---~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~ 395 (406)
T PRK12381 320 NTINARYGLFSEIRGLGLLIGCVLN-AE---YAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFAR 395 (406)
T ss_pred HHHHhhCCCEEEEecCeEEEEEEec-Cc---hhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 988 456767899999999999986 11 01234567889999999998765 7999999999999999999999876
Q ss_pred ccc
Q psy8199 644 TFN 646 (965)
Q Consensus 644 ~~~ 646 (965)
.+.
T Consensus 396 ~l~ 398 (406)
T PRK12381 396 ACE 398 (406)
T ss_pred HHH
Confidence 553
No 65
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=3e-56 Score=511.23 Aligned_cols=371 Identities=27% Similarity=0.447 Sum_probs=325.1
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.||++||||.+|+++.++||+||+|++|+++|++++.+.+. .+.++...+|+++|+++++ .++++|++||+|
T Consensus 67 ~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~la~~L~~~~~--~~~~~f~~SGse 143 (474)
T PLN02624 67 SRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR-AFYNDKFPEFAEYLTSMFG--YDMVLPMNTGAE 143 (474)
T ss_pred CEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc-ccCCHHHHHHHHHHHhhcC--CCeEEEeCChHH
Confidence 9999999999999999999999999999999999999999765543 5778999999999999984 689999999999
Q ss_pred HHHHHHHHHHHHHHh-cCCC-CceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 326 AVEVALKMSFHYWYN-KGFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 326 A~~~Al~~a~~~~~~-~g~~-~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
||+.|+|+|+.|+.. +|.+ ++.+|+.+.++|||++.+++++++.+.+...+.+..+++.++|+
T Consensus 144 A~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~--------------- 208 (474)
T PLN02624 144 GVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF--------------- 208 (474)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC---------------
Confidence 999999999998543 2333 45689999999999999999999887777777777777776655
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 404 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 404 ~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
+|++.++++++..++++++|++|| +++++|.+.|+++||++|+++|++||+++|+||||+||||+|.+++++++++.
T Consensus 209 --~d~~~l~~~l~~~~~~iaaiiiEp-v~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~ 285 (474)
T PLN02624 209 --GDLDALEKIFEEDGDRIAAFLFEP-IQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVR 285 (474)
T ss_pred --CCHHHHHHHHHhCCCCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCC
Confidence 467889998976667899999999 99999999999999999999999999999999999999999999998889999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 563 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~ 563 (965)
||+++|||+++||++|+|++++++++++.+.. ..+++||++||++|+++.++|+.++++++.+++.++++++++
T Consensus 286 pDiv~lsK~lggG~~pigav~~~~~i~~~~~~------~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~ 359 (474)
T PLN02624 286 PDVVILGKALGGGVIPVSAVLADKDVMLCIKP------GEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRD 359 (474)
T ss_pred CCEEEecccccCCCCcceeeeecHHHHhHhcc------CCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 99999999999998999999999999887754 357899999999999999999999888899999999999999
Q ss_pred HHHcc-cCCC-ceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHh
Q psy8199 564 ALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSA 640 (965)
Q Consensus 564 ~L~~l-~~~~-~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~ 640 (965)
+|+++ .+++ .+..++|.|+|+.+++. +.......+..+.+.|.++||++.|.+ +++||+||+.++++++++++++
T Consensus 360 ~L~~l~~~~~~~i~~vrg~G~~~~i~l~--~~~~~~~~a~~~~~~L~e~GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~ 437 (474)
T PLN02624 360 QLQKIQKQFPKLIKEVRGRGLLNAVVLN--SPKLGPVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDELQECSKA 437 (474)
T ss_pred HHHHHHHhCCCceEEEEeeEEEEEEEec--CCCcChHHHHHHHHHHHhCCeEEecCCCCEEEEECCccCCHHHHHHHHHH
Confidence 99988 4566 47789999999999885 211111234568888999999998864 7899999999999999999999
Q ss_pred hhccc
Q psy8199 641 IFQTF 645 (965)
Q Consensus 641 l~~~~ 645 (965)
+.+.+
T Consensus 438 L~~~l 442 (474)
T PLN02624 438 LSDVL 442 (474)
T ss_pred HHHHH
Confidence 87654
No 66
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-56 Score=550.71 Aligned_cols=383 Identities=21% Similarity=0.351 Sum_probs=316.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.|||+|||+.+|+ .++||+||+|++|+++|+.++.+. +.+.++...+|+++|++.+|.+.++|+|++||||
T Consensus 577 ~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~--~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsE 652 (972)
T PRK06149 577 HHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTN--SRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSE 652 (972)
T ss_pred eEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHhcccc--ccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchH
Confidence 999999999999999885 479999999999999999987543 3457789999999999999877899999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCcc-chhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK-EIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
||+.|+|+||.+ ++|.+||+++++|||+|.+++++++..... ..+.+...++..++.|+.++.+.........
T Consensus 653 A~e~AlklAr~~------tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~ 726 (972)
T PRK06149 653 ANDLAIRLAWAA------SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAAD 726 (972)
T ss_pred HHHHHHHHHHHh------cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHH
Confidence 999999999998 588999999999999999998886632211 1122333456666666654433211110111
Q ss_pred -HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-cccccccCC
Q psy8199 405 -RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHAEI 482 (965)
Q Consensus 405 -~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~ 482 (965)
.+++++..+.+.+.++++++||+|| +++++|.++||++||++|+++|++||+++|+|||||||||+|+ +|+++++|+
T Consensus 727 ~~~~~~~~l~~~~~~~~~iAavI~Ep-v~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv 805 (972)
T PRK06149 727 YVRDVVAQLEELDASGRGLAGFICEP-VYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV 805 (972)
T ss_pred HHHHHHHHHHHHhhcCCceEEEEEcc-cccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC
Confidence 1222222222223467899999999 9999999999999999999999999999999999999999997 679999999
Q ss_pred CcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 483 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 483 ~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
.||++||||+|||| +|+|++++++++++.+... ..+.+||+|||++|++|+++|++++++++.+++++++++|+
T Consensus 806 ~PDivt~gK~lg~G-~Pl~av~~~~~i~~~~~~~-----~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~ 879 (972)
T PRK06149 806 VPDIITMAKGMGNG-HPLGAVITRREIAEALEAE-----GYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLK 879 (972)
T ss_pred CCCEEEecccccCC-eeeEEEEEcHHHHhhhccC-----CcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999 7999999999999988641 12457899999999999999999999999999999999999
Q ss_pred HHHHcc-cCCCceeeeeceeEEEEEEEeecCcc---chhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHHHHH
Q psy8199 563 KALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEIQ 635 (965)
Q Consensus 563 ~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~---~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~~i~ 635 (965)
++|+++ .++|.+.+|+|.|+|+++++. .+.. .....+..+.+.|+++||++.+.+ +++||.||+++++++++
T Consensus 880 ~~L~~l~~~~~~i~~vrG~Gl~~gvel~-~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id 958 (972)
T PRK06149 880 ARLEALADRHPLIGAVHGMGLYLGVELV-RDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESAD 958 (972)
T ss_pred HHHHHHHHhCCCeEEEeecceEEEEEEe-cCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHH
Confidence 999998 568989999999999999996 3221 122345678899999999998865 79999999999999999
Q ss_pred HHHHhhhcccc
Q psy8199 636 HMTSAIFQTFN 646 (965)
Q Consensus 636 ~~~~~l~~~~~ 646 (965)
++++++.+++.
T Consensus 959 ~~~~~l~~~l~ 969 (972)
T PRK06149 959 FFVDMLDRVLT 969 (972)
T ss_pred HHHHHHHHHHH
Confidence 99999887653
No 67
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=2.3e-56 Score=507.00 Aligned_cols=370 Identities=18% Similarity=0.224 Sum_probs=304.6
Q ss_pred CCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCC
Q psy8199 241 LPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG 315 (965)
Q Consensus 241 ~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~ 315 (965)
.|+++ +||||+|||+|||+.+++|+.+|||+||+|++|+++|++++.+ .+++++...+++++|++.++ .+
T Consensus 57 ~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~---~~~~~~~~~~lAe~l~~~~~--~~ 131 (453)
T PRK07046 57 FPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLT---TMLPSEDAAWVGEELARRFG--LP 131 (453)
T ss_pred CCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCC---CCCCCHHHHHHHHHHHHHhC--CC
Confidence 46655 9999999999999999999999999999999999999998643 35678999999999999984 78
Q ss_pred eEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccc--cCCcCccchhccc----CCCeeEecCC
Q psy8199 316 HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAV--TNIQSFKEIYTSL----LNKTYIITTP 389 (965)
Q Consensus 316 ~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~ 389 (965)
+|+|++|||||++.|+|+||.| ++|++|+.|+++|||++.+++.. ++....+..+.+. ...+..
T Consensus 132 ~v~F~nSGtEA~e~AlrlAR~~------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~---- 201 (453)
T PRK07046 132 YWQVATTATDANRFVLRWARAV------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRV---- 201 (453)
T ss_pred EEEEECCHHHHHHHHHHHHHHh------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEe----
Confidence 9999999999999999999998 68999999999999998766643 2222111111110 111122
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCC
Q psy8199 390 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 469 (965)
Q Consensus 390 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 469 (965)
+.+||++++++++. .+++||||+|| +++++|.++|+++||++|+++|++||+++|+|||+| |
T Consensus 202 -------------~~~nd~~~l~~~l~--~~~vAavi~EP-i~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-f- 263 (453)
T PRK07046 202 -------------VEFNDLAALEAALA--DGDVAAVLAEP-AMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-I- 263 (453)
T ss_pred -------------eCCCCHHHHHHHhC--CCCeEEEEECC-CCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-C-
Confidence 22368899999885 46799999999 999999999999999999999999999999999999 5
Q ss_pred cccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccC---CcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy8199 470 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN---NINIFLHSHSYSGNPLACCAALATLEIFN 546 (965)
Q Consensus 470 r~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~---~~~~~~~~~t~~~~~~~~aaa~a~L~~~~ 546 (965)
|+|.....+++|+.||++||||+|+|| +|+|++++++++++.+.... ....+.|++||++||++|++++++|++++
T Consensus 264 r~g~Gg~~~~~gv~PDi~t~gK~lggG-~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~ 342 (453)
T PRK07046 264 SSGPGGYTRAHGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVM 342 (453)
T ss_pred ccCCcchhHHhCCCccceeehhhhcCC-CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHh
Confidence 466555677889999999999999999 79999999999999885311 11235688999999999999999999998
Q ss_pred cccHHHHHHHHHHHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCc-cc-------hhhHHHHHHHHHHHcCcEEeec
Q psy8199 547 KDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP-EQ-------IETFSKKFFVAALKNELLLRPI 617 (965)
Q Consensus 547 ~~~~~~~~~~~~~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~-~~-------~~~~~~~~~~~l~~~Gi~~~~~ 617 (965)
++++++++++++++|+++|+++ .+++....+++.|+++.+.+..... .. .......+...|+++||++.|.
T Consensus 343 ~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~ 422 (453)
T PRK07046 343 TEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF 422 (453)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc
Confidence 8889999999999999999987 5666667899999999988751111 00 1123446778899999999987
Q ss_pred CCEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 618 GNTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 618 ~~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
++.++++|+ +++++|+++++++.+++.
T Consensus 423 ~~~~~~~p~--~t~~did~~~~~~~~~l~ 449 (453)
T PRK07046 423 HNMMLVCPA--TTAADVDRLVAAFDACLG 449 (453)
T ss_pred cCcEEEeCC--CCHHHHHHHHHHHHHHHH
Confidence 778899986 999999999999887654
No 68
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.9e-56 Score=501.41 Aligned_cols=392 Identities=18% Similarity=0.271 Sum_probs=314.7
Q ss_pred ccccccccccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhcccccc
Q psy8199 217 QALHAYKLGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML 291 (965)
Q Consensus 217 ~~Lha~~l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~ 291 (965)
.+.+..+-+..++........ ..|+++ +||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++..
T Consensus 13 ~a~~~~p~g~~~~~~~~~~~~--~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--- 87 (433)
T PRK00615 13 EACQYFPGGVNSPVRACRSVG--ITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTS--- 87 (433)
T ss_pred HHHhhCCCCcCCCcccccccC--CCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCC---
Confidence 344555555555544321110 245545 9999999999999999999999999999999999999988642
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCc---cccccccC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGET---LGALAVTN 368 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~---~~~~~~~~ 368 (965)
..++++...+|+++|.+.+|...++|+|++|||||++.|+|+||.| ++|.+|+.++++|||++ .++++.++
T Consensus 88 ~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~------tgr~~ii~~~~~yHG~td~~~~~~~~~~ 161 (433)
T PRK00615 88 YGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGI------TGRSIIIKFLGCYHGHADTLLQGISFSE 161 (433)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHh------hCCCEEEEEcCccCCCCcccCcccccCC
Confidence 3567899999999999999755689999999999999999999998 58999999999999998 56666665
Q ss_pred CcCcc--chh--cccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHH
Q psy8199 369 IQSFK--EIY--TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIY 444 (965)
Q Consensus 369 ~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~ 444 (965)
..... ..+ .+...... .+.++|++++++.+.++.+++++||+|| +++++|.++|+++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~d~~~l~~~l~~~~~~~aavI~Ep-v~~~~G~~~p~~~y 223 (433)
T PRK00615 162 TSLDTLTHLVDTDLAHPLTL-----------------SLPYNDFQIFQTVMNSLGHRVAGVIFEP-ICANMGVVLPKPGF 223 (433)
T ss_pred CCcCcCCCCCCCCCCCCCeE-----------------eCCCCCHHHHHHHHHhcCCceEEEEECC-CCCCCCcccCCHHH
Confidence 22100 000 00000011 1223678899999976667899999999 99999999999999
Q ss_pred HHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccc
Q psy8199 445 LKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLH 524 (965)
Q Consensus 445 l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~ 524 (965)
|++|+++|++||+++|+|||+||| |+|.+|+++++|+.||++||||+++|| +|+|++++++++++.+... ..+.+
T Consensus 224 l~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG-~p~~av~~~~~i~~~~~~~---~~~~~ 298 (433)
T PRK00615 224 IEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAPE---GTIFQ 298 (433)
T ss_pred HHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCC-cceeeeeecHHHHhhhcCC---CCccc
Confidence 999999999999999999999999 999999999999999999999999999 6999999999999988531 23468
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcc-cC--CCceeeeeceeEEEEEEEeecCccc------
Q psy8199 525 SHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-IT--HPKIINFRQKGMIWAFDVIIEDPEQ------ 595 (965)
Q Consensus 525 ~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l-~~--~~~i~~v~g~G~~~~i~~~~~~~~~------ 595 (965)
++||++||++|++++++|++++++++.+++++++++|+++|+++ .+ ++ +..++ .|+|+++++. .+..+
T Consensus 299 ~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~-v~~~r-~G~~~~i~~~-~~~~~~~~~~~ 375 (433)
T PRK00615 299 AGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFP-VSLVR-YGSMFSFFFN-ENRPNNLAEAQ 375 (433)
T ss_pred CCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEe-eceEEEEEEe-CCCCCChHHHh
Confidence 89999999999999999999988889999999999999999887 33 44 66777 8999999997 22111
Q ss_pred --hhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhccccc
Q psy8199 596 --IETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 596 --~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~~~~~ 647 (965)
.......+...|.++||++.+.. ... ..+..+++++|+++++++.+++..
T Consensus 376 ~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~--~ls~~ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 376 LSDIEAFQTFYQSAFSKGVYLSPSPFEAS--FLSSAHSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred hCCHHHHHHHHHHHHHCCeeecCcccccc--ceecCCCHHHHHHHHHHHHHHHHH
Confidence 11234568899999999998743 222 334789999999999998876543
No 69
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=1.3e-54 Score=492.37 Aligned_cols=360 Identities=27% Similarity=0.454 Sum_probs=315.9
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.+.+. .+.++...+|+++|+++.+ .++++|++||||
T Consensus 32 ~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~~~~~SGse 108 (396)
T PRK04073 32 VWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSR-AFHSDQLGPWYEKVAKLTG--KDMVLPMNTGAE 108 (396)
T ss_pred cEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHhcCC--CCeEEEcCChHH
Confidence 9999999999999999999999999999999999999998765542 4678889999999999875 579999999999
Q ss_pred HHHHHHHHHHHHHHh-cCC-CCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 326 AVEVALKMSFHYWYN-KGF-LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 326 A~~~Al~~a~~~~~~-~g~-~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
||+.|+|+|+.|++. +|. +++++||+++++|||++.+++++++.+.+...+.+..+++.++|.
T Consensus 109 A~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 173 (396)
T PRK04073 109 AVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY--------------- 173 (396)
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC---------------
Confidence 999999999998543 242 577899999999999999999999877666666666666666655
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 404 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 404 ~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
+|++++++++. +++++|++|| ++|++|.+.++++|+++|+++|++||+++|+||||+||||+|++++++++++.
T Consensus 174 --~d~~~l~~~i~---~~~~~viiep-~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~ 247 (396)
T PRK04073 174 --GDLEALKAAIT---PNTAAFLVEP-IQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVT 247 (396)
T ss_pred --CCHHHHHHhcc---cCeEEEEEcC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCC
Confidence 36788888774 4689999999 99999999999999999999999999999999999999999998888888999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 563 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~ 563 (965)
||+++|||++++|++|+|++++++++++.+.. ..+++||++||++|++++++|+.++++++.+++++++++|.+
T Consensus 248 pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~------~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~ 321 (396)
T PRK04073 248 PDMYILGKALGGGVFPISCVAANRDILGVFTP------GSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKE 321 (396)
T ss_pred CCEEEecccccCCCCcceEEEEcHHHHhhhcC------CCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 99999999999988999999999999988754 247789999999999999999998878899999999999999
Q ss_pred HHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 564 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 564 ~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
.|+++ ..+.+..+++.|+|+.+++. + .+..+.+.|+++||++.+.+ +++||+||+.+++++++++++++.
T Consensus 322 ~L~~l-~~~~i~~~~~~g~~~~~~~~--~------~~~~~~~~l~~~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l~ 392 (396)
T PRK04073 322 QLKEI-DNPMIKEVRGRGLFIGVELN--E------PARPYCEALKEEGLLCKETHETVIRFAPPLVITKEELDWAFEKIK 392 (396)
T ss_pred HHHhh-cCCcccceecceEEEEEEec--c------hHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHH
Confidence 99887 34567788999999998875 1 13467788999999998765 799999999999999999999887
Q ss_pred cc
Q psy8199 643 QT 644 (965)
Q Consensus 643 ~~ 644 (965)
+.
T Consensus 393 ~~ 394 (396)
T PRK04073 393 AV 394 (396)
T ss_pred HH
Confidence 54
No 70
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.3e-53 Score=484.12 Aligned_cols=361 Identities=31% Similarity=0.473 Sum_probs=316.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.|||+|||+.+|+|+++|||+||+|++|+++|++++.+.+ ..+.++...+++++|++..+ .++|+|++||+|
T Consensus 23 ~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGse 99 (389)
T PRK01278 23 VWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVS-NLYRIPEQERLAERLVENSF--ADKVFFTNSGAE 99 (389)
T ss_pred CEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccc-cccCChHHHHHHHHHHhhCC--CCEEEEcCCcHH
Confidence 999999999999999999999999999999999999998865543 23578899999999999874 579999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|++.|+++++.|+...|.+++.+||+++++|||++.+++++++.+.+...+.+..+++.++|.
T Consensus 100 A~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 162 (389)
T PRK01278 100 AVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPF----------------- 162 (389)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCC-----------------
Confidence 999999999999877787888999999999999999999998876555444444444544444
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
+|++++++++. +++++|++|| +++++|...++++++++|+++|++||+++|+||||+||||+|++++++++++.||
T Consensus 163 ~d~~~l~~~l~---~~~~avivep-~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd 238 (389)
T PRK01278 163 GDIEALKAAIT---PNTAAILIEP-IQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD 238 (389)
T ss_pred CCHHHHHHhhC---CCeEEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC
Confidence 36788888885 4799999999 8999998899999999999999999999999999999999999888888899999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++||||++++| +|+|++++++++++.+.. ..+++||++||++|++++++|+.++++++.+++++++++++++|
T Consensus 239 i~t~sK~l~~G-~~ig~~~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l 311 (389)
T PRK01278 239 IMAVAKGIGGG-FPLGACLATEEAAKGMTP------GTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKL 311 (389)
T ss_pred EEEEehhccCC-cceEEEEEcHHHHhccCC------CCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 99999999988 899999999999887754 35789999999999999999999987788999999999999999
Q ss_pred Hcc-cCCC-ceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 566 TSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 566 ~~l-~~~~-~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
+++ .+++ .+..+++.|+++++++. .+ ...+.+.|+++||++.|.+ +.+||+||+++++++++++++++.
T Consensus 312 ~~l~~~~~~~~~~v~g~G~~~~i~~~-~~-------~~~~~~~l~~~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~ 383 (389)
T PRK01278 312 EGLVDRFPDVIEEVRGKGLLLGLKCV-VP-------NRDLVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALERLE 383 (389)
T ss_pred HHHHhhCCCceeeEecccEEEEEEEe-cC-------HHHHHHHHHHCCeEEeecCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 887 4566 57789999999998875 11 3468888999999999875 799999999999999999999987
Q ss_pred ccc
Q psy8199 643 QTF 645 (965)
Q Consensus 643 ~~~ 645 (965)
+.+
T Consensus 384 ~~l 386 (389)
T PRK01278 384 RAA 386 (389)
T ss_pred HHH
Confidence 654
No 71
>KOG1403|consensus
Probab=100.00 E-value=2.6e-54 Score=423.48 Aligned_cols=390 Identities=21% Similarity=0.349 Sum_probs=322.7
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
.|++|+.|++|||++++ +...||+||+|++|...|+...+ ++.++.+....+.|++|...+| +++-++|+|||||
T Consensus 39 QYmfDE~g~~yLDCInN--VaHvghchp~VV~A~~kQmat~~--tN~RFlhd~lv~cA~~l~stlP-eLsvc~F~NSGSE 113 (452)
T KOG1403|consen 39 QYMFDEEGTRYLDCINN--VAHVGHCHPEVVRAGAKQMATIS--TNNRFLHDELVQCARTLTSTLP-ELSVCFFVNSGSE 113 (452)
T ss_pred ceeeccCcccHHHHhhh--hhhcccCCHHHHHHHHHHHhHhc--ccchhhHHHHHHHHHHHhhcCC-CceEEEEecCCch
Confidence 89999999999999988 67889999999999999998763 3467889999999999999998 5999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChh---H
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN---E 402 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 402 (965)
||++|+|+||+| ++...+|+.+.+|||.....+-++--...+.....-+..+...|.|+.++........ .
T Consensus 114 ANDLALRLAR~f------tkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~ 187 (452)
T KOG1403|consen 114 ANDLALRLARNF------TKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDAD 187 (452)
T ss_pred hhHHHHHHHHhh------cccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCccc
Confidence 999999999999 5888999999999999777776664322222222222334556777766554322111 1
Q ss_pred HHHHHHHHHHHHHHh---CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-ccccc
Q psy8199 403 IARCAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACE 478 (965)
Q Consensus 403 ~~~~d~~~le~~l~~---~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~ 478 (965)
.+..-.+.+++++.+ .+..+||++.|. .|+-||.+.||++|++.+.+..+.+|-++|.||||+||||.|+ +|+++
T Consensus 188 ~~~~Yad~vk~I~~d~~~~g~gvAAfiAEs-lQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq 266 (452)
T KOG1403|consen 188 MGALYADPVKEICQDQLAKGQGVAAFIAES-LQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQ 266 (452)
T ss_pred chhhhhhHHHHHHHHHHhcCCcHHHHHHHH-HHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhh
Confidence 111223445555533 256799999999 9999999999999999999999999999999999999999997 79999
Q ss_pred ccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHH
Q psy8199 479 HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDM 558 (965)
Q Consensus 479 ~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~ 558 (965)
.+++.|||+|++|.||+| .|++++..+++++++|... .+.+..||+|||++||+++++|++++++++.++..+.+
T Consensus 267 ~y~fiPDIVtmgKpmGNG-hPVa~VattkeIA~Af~at----gv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG 341 (452)
T KOG1403|consen 267 TYNFIPDIVTMGKPMGNG-HPVAAVATTKEIAQAFHAT----GVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVG 341 (452)
T ss_pred hhccccchheecccCCCC-CeeeEEeccHHHHHHhccc----cceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 999999999999999999 5999999999999999752 24567999999999999999999999999999999999
Q ss_pred HHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCccch---hhHHHHHHHHHHHc-CcEEee---cCCEEEEeCCcccC
Q psy8199 559 KKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI---ETFSKKFFVAALKN-ELLLRP---IGNTVYLMPPYILN 630 (965)
Q Consensus 559 ~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~---~~~~~~~~~~l~~~-Gi~~~~---~~~~lR~~p~~~~t 630 (965)
++|...|+++ .++++|+++||.|+|+++++. .|..+. ...+..+..+|++. ||++.. ..|.+.|.||.+++
T Consensus 342 ~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLV-kD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFn 420 (452)
T KOG1403|consen 342 EKLEVLLRRLKQKHECIGDVRGVGLFIGIDLV-KDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFN 420 (452)
T ss_pred HHHHHHHHHHhhhccceeccccceEEEeeeee-cccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccC
Confidence 9999999988 789999999999999999998 554332 33455666777754 688864 44899999999999
Q ss_pred HHHHHHHHHhhhcccccHHHHHH
Q psy8199 631 KNEIQHMTSAIFQTFNELDEVIN 653 (965)
Q Consensus 631 ~~~i~~~~~~l~~~~~~~~e~l~ 653 (965)
++..++++..+.+.+..+++.+.
T Consensus 421 eena~e~v~~ld~iLT~mee~~~ 443 (452)
T KOG1403|consen 421 EENADEFVLGLDEILTVMEERLA 443 (452)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998887776666543
No 72
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=1.2e-51 Score=469.07 Aligned_cols=365 Identities=26% Similarity=0.448 Sum_probs=313.7
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.||++||||.+|+|+.+|||+||+|.+|+.+++++..+... .+.++...+++++|++..+ .++++|++||+|
T Consensus 32 ~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~~~~~sGse 108 (403)
T PRK05093 32 SRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISN-VFTNEPALRLAKKLIDATF--AERVFFANSGAE 108 (403)
T ss_pred CEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccC-ccCCHHHHHHHHHHHhhCC--CCEEEEeCchHH
Confidence 9999999999999999999999999999999999999987644332 3567888999999999874 579999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||+.|+|++|.++..++.+++.+||+++++|||++.+++++++.+.+...+.+...++.++|.
T Consensus 109 A~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 171 (403)
T PRK05093 109 ANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF----------------- 171 (403)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----------------
Confidence 999999999998755544678899999999999999998888765544444444444555544
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
+|++++++.+. +++++|++|| +++++|.+.++++|+++|+++|++||+++|+||||+|||++|++++++++++.||
T Consensus 172 ~d~~~l~~~l~---~~~aaiiiep-~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd 247 (403)
T PRK05093 172 NDLAAVKAVID---DHTCAVVVEP-IQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD 247 (403)
T ss_pred CCHHHHHHHhc---CCeEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC
Confidence 47888888884 4689999999 9999999889999999999999999999999999999999998888888899999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
+++|||++++| +|+|++++++++++.+.. ..+++||+++|++|++++++|+.+.++++.++++++++++.+.|
T Consensus 248 i~s~sK~l~~G-~rig~vv~~~~i~~~l~~------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L 320 (403)
T PRK05093 248 ILTSAKALGGG-FPIGAMLTTAEIASHFKV------GTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGL 320 (403)
T ss_pred EEEecccccCC-cceEEEEEcHHHHhhcCC------CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 99999999988 899999999999988864 34678999999999999999999887889999999999999999
Q ss_pred Hcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 566 TSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 566 ~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+++ .+.+.+..+++.|+++++.+. .+ ....+.+++..|+++||++.+.+ +.+||+|++.+++++++++++++.+
T Consensus 321 ~~~~~~~~~~~~~~~~G~~~~~~l~-~~---~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~~ 396 (403)
T PRK05093 321 QKINQKYGVFSEIRGMGLLIGAELK-PQ---YKGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFEK 396 (403)
T ss_pred HHHHhhCCCeEeEeeCceEEEEEec-Cc---chhHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 887 445566788999999999885 11 01134568889999999999866 7999999999999999999999876
Q ss_pred cc
Q psy8199 644 TF 645 (965)
Q Consensus 644 ~~ 645 (965)
.+
T Consensus 397 ~l 398 (403)
T PRK05093 397 AV 398 (403)
T ss_pred HH
Confidence 54
No 73
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=3.2e-51 Score=465.84 Aligned_cols=368 Identities=28% Similarity=0.451 Sum_probs=315.2
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.||++||||.+++++.++||+||+|++|++++++++++.+. .+.++...+++++|++.++ .++++|++||++
T Consensus 29 ~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~ 105 (401)
T TIGR01885 29 VHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSR-AFYNDVFGEFAEYVTKLFG--YDKVLPMNTGAE 105 (401)
T ss_pred CEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHHHhhcC--CCEEEEeCccHH
Confidence 8999999999999999999999999999999999999988765432 3468889999999999984 689999999999
Q ss_pred HHHHHHHHHHHHHHhc-C-CCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 326 AVEVALKMSFHYWYNK-G-FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~-g-~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
||+.|+++++.++..+ | .+++.+|++++++|||++.+++++++.+.+...+.+..++...+|.
T Consensus 106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 170 (401)
T TIGR01885 106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY--------------- 170 (401)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC---------------
Confidence 9999999999986443 2 2457889999999999999999998765544444444444444444
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 404 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 404 ~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
+|+++|++++++.++++++|++|| +++++|.+.|+++||++|+++|++||+++|+||||+||||+|++++.+++++.
T Consensus 171 --~d~~~le~~l~~~~~~~~avi~E~-v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~ 247 (401)
T TIGR01885 171 --NNLEALEEALEDHGPNVCAFIVEP-IQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVK 247 (401)
T ss_pred --CCHHHHHHHHHhcCCCEEEEEEeC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCC
Confidence 467889998876667899999999 99999999999999999999999999999999999999999998888888999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 563 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~ 563 (965)
||++|+||+++||++|+|++++++++++.+.. ..+++||++||+++++++++|+.++++++.++++++++++++
T Consensus 248 ~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~------~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~ 321 (401)
T TIGR01885 248 PDIVLLGKALSGGVYPVSAVLADDDVMLTIKP------GEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRD 321 (401)
T ss_pred CCEEEeeccccCCCCCcEEEEEcHHHHhhccC------CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999999999988999999999999987754 236689999999999999999999877889999999999999
Q ss_pred HHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 564 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 564 ~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
+|+++. .+.+..++|.|+|+.+.+. +... ...+..+.+.|.++||++.|.+ +.+||+||+.+++++++++++++.
T Consensus 322 ~L~~l~-~~~~~~~~g~g~~~~i~~~--~~~~-~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~l~ 397 (401)
T TIGR01885 322 QLKKLP-KPIITEVRGRGLLNAIVID--ESKT-GRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIK 397 (401)
T ss_pred HHHhcc-CCceeEEeecCeeEEEEec--cCcc-hhHHHHHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHHHHHHHH
Confidence 999873 3556788999999999885 2111 1134578889999999998865 799999999999999999999987
Q ss_pred cc
Q psy8199 643 QT 644 (965)
Q Consensus 643 ~~ 644 (965)
+.
T Consensus 398 ~~ 399 (401)
T TIGR01885 398 KV 399 (401)
T ss_pred HH
Confidence 54
No 74
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=7.8e-51 Score=463.98 Aligned_cols=379 Identities=29% Similarity=0.454 Sum_probs=321.3
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCC-CeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGs 324 (965)
+||||.||++|||+.+|+|+.++||+||+|.+|+.+|++++.+.....+.++...+++++|++..|.+. ++++|++||+
T Consensus 33 ~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGs 112 (425)
T PRK08088 33 CRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGS 112 (425)
T ss_pred CEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 999999999999999999999999999999999999999876544334557888999999999887555 6999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc-CccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
||++.|+|+|+.+ +++.+||+++++|||++.+++++++.. .+...+.+...++.+++.|..... .+
T Consensus 113 ea~e~Alklar~~------~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~---- 179 (425)
T PRK08088 113 EAVENAVKIARAA------TKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG---VS---- 179 (425)
T ss_pred HHHHHHHHHHHHH------hCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC---cc----
Confidence 9999999999998 578899999999999999999988742 345455555556666665532221 11
Q ss_pred HHHHHHHHHHHHHh--CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccC
Q psy8199 404 ARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 481 (965)
Q Consensus 404 ~~~d~~~le~~l~~--~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 481 (965)
...++++|+++++. .++++++|++|| +++++|.+.++++|+++|+++|++||+++|.||+|+||||+|.++++++++
T Consensus 180 ~~~~~~~l~~~l~~~~~~~~~aavi~Ep-i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~ 258 (425)
T PRK08088 180 EDDAIASIERIFKNDAAPEDIAAIIIEP-VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMG 258 (425)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcC
Confidence 11347788888863 357899999999 999999999999999999999999999999999999999999988888889
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 561 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l 561 (965)
+.||+.+|||++++| +|+|++++++++++.+.. ..+++|+++||++|+++.++|+.+..+++.+++++.++++
T Consensus 259 ~~pdi~s~sK~l~~G-~rig~v~~~~~~~~~~~~------~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 331 (425)
T PRK08088 259 VAADLTTFAKSIAGG-FPLAGVTGRAEVMDAIAP------GGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKL 331 (425)
T ss_pred CCCCEEEEeccccCC-CcceeeEecHHHHhhcCC------CCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999988 799999999999998865 2477899999999999999999988888999999999999
Q ss_pred HHHHHcc-cCCCceeeeeceeEEEEEEEeecCcc---chhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHHHH
Q psy8199 562 TKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEI 634 (965)
Q Consensus 562 ~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~---~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~~i 634 (965)
++.|.++ .++|.+..++|.|+|+++.+. .+.. +.......+.+.|.++||++.+.+ +.+||+||+.++++++
T Consensus 332 ~~~l~~l~~~~~~~~~v~g~G~~~~l~l~-~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei 410 (425)
T PRK08088 332 KDGLLAIAEKHPEIGDVRGLGAMIAIELF-EDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQI 410 (425)
T ss_pred HHHHHHHHHhCCCeEEEeccceEEEEEEe-cCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHH
Confidence 9999988 557778889999999999985 2221 122345678899999999887643 7999999999999999
Q ss_pred HHHHHhhhcccc
Q psy8199 635 QHMTSAIFQTFN 646 (965)
Q Consensus 635 ~~~~~~l~~~~~ 646 (965)
++.++++.+++.
T Consensus 411 ~~~i~~l~~~l~ 422 (425)
T PRK08088 411 RQGLEIIAQCFD 422 (425)
T ss_pred HHHHHHHHHHHH
Confidence 999999876553
No 75
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=4.5e-51 Score=465.20 Aligned_cols=357 Identities=27% Similarity=0.479 Sum_probs=311.0
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCC-CCeEEEcCChh
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGA 324 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~v~~~~sGs 324 (965)
+|+||.|||+||||.+++++++|||+||+|.+|+.+++++..+.. ..+.++...+|+++|++.++.. .++++|++||+
T Consensus 35 ~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgs 113 (398)
T PRK03244 35 AVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVS-NLFATEPQIALAERLVELLGAPEGGRVFFCNSGA 113 (398)
T ss_pred cEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCcc-CccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchH
Confidence 899999999999999999999999999999999999999865432 3467788899999999998732 47999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
||++.|+++++.. +++++|.++++|||++.+++++++...+...+.+...++.++|.
T Consensus 114 ea~~~al~~~~~~-------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 170 (398)
T PRK03244 114 EANEAAFKLARLT-------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY---------------- 170 (398)
T ss_pred HHHHHHHHHHHHH-------CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC----------------
Confidence 9999999999873 67889999999999999999888765544445444445555554
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCc
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 484 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 484 (965)
+|++++++++. +++++|++|| ++|++|.+.|+++|+++|+++|++||+++|+||+|+||||+|++++++++++.|
T Consensus 171 -~d~~~l~~~~~---~~~~aviiep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~p 245 (398)
T PRK03244 171 -GDVDALAAAVD---DDTAAVFLEP-IQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTP 245 (398)
T ss_pred -CCHHHHHHhhc---CCeEEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCC
Confidence 36788888773 4789999999 899999999999999999999999999999999999999999988888899999
Q ss_pred ceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Q psy8199 485 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 564 (965)
Q Consensus 485 Divt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~ 564 (965)
|++||||++++| +|+|++++++++++.+.. ..+++||++||++|++++++|+++.++++.+++++++++|++.
T Consensus 246 Di~t~sK~l~~G-~~ig~~~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~ 318 (398)
T PRK03244 246 DVVTLAKGLGGG-LPIGACLAFGPAADLLTP------GLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAG 318 (398)
T ss_pred CEEEEchhhhCC-cccEEEEEcHHHHhhccC------CCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 999999999988 799999999999888754 3578899999999999999999988888999999999999999
Q ss_pred HHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 565 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 565 L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
|+++ .++.+..+++.|+|+++++. .+ .+..+.+.|.++||++.+.+ +.+||+||+.+++++++++++++.+
T Consensus 319 L~~~-~~~~~~~v~g~g~~~~i~~~-~~------~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~ 390 (398)
T PRK03244 319 IEAL-GHPLVDHVRGRGLLLGIVLT-AP------VAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPA 390 (398)
T ss_pred HHhc-CCCceeeEeeccEEEEEEEe-cc------HHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 9886 35667789999999999985 11 24568889999999998855 8999999999999999999999887
Q ss_pred ccc
Q psy8199 644 TFN 646 (965)
Q Consensus 644 ~~~ 646 (965)
.+.
T Consensus 391 ~l~ 393 (398)
T PRK03244 391 ILD 393 (398)
T ss_pred HHH
Confidence 654
No 76
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=2.7e-51 Score=466.87 Aligned_cols=400 Identities=21% Similarity=0.259 Sum_probs=318.8
Q ss_pred cccccccccccccccCcccccccccCCCce-----eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccc
Q psy8199 216 RQALHAYKLGLIHPKNNLKLKWRINLPDDI-----SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVM 290 (965)
Q Consensus 216 ~~~Lha~~l~f~~p~~~~~~~~~~~~p~~~-----~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~ 290 (965)
+.+-|-.+-++.+|...+.... ..|+.+ +||||.||++|||+.+|+|+.+|||+||+|++|+.+|+++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--- 83 (426)
T PRK00062 9 ERAKKLIPGGVNSPVRAFKSVG--GTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--- 83 (426)
T ss_pred HHHHHhCCCCcCCcccccCCCC--CCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC---
Confidence 3345555666666665554321 124444 999999999999999999999999999999999999998843
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
...+.++...+|+++|++.+| +.++|+|++||+|||+.|+|+++.+ +++++||+++++|||++.++.+.++..
T Consensus 84 ~~~~~~~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e~Aik~a~~~------~g~~~ii~~~~~yHG~t~~~~~~~~~~ 156 (426)
T PRK00062 84 SFGAPTELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRLARGY------TGRDKIIKFEGCYHGHADSLLVKAGSG 156 (426)
T ss_pred cCCCCCHHHHHHHHHHHHhCC-CCCEEEEecCHHHHHHHHHHHHHHH------hCCCeEEEEcCccCCchhhhhhccCcc
Confidence 235678889999999999886 5789999999999999999999998 478899999999999997777765422
Q ss_pred CccchhcccCCCee-EecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTY-IITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVR 449 (965)
Q Consensus 371 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~ 449 (965)
.... ..+...... .++ +... .+.++|++++++.+.+..+++++||+|| +++++|.+.++++||++|+
T Consensus 157 ~~~~-~~~~~~~~~~~~~-~~~~---------~~~~~d~~~l~~~i~~~~~~~aaiivEp-v~~~~G~~~~~~~~l~~l~ 224 (426)
T PRK00062 157 AATL-GLPDSPGVPEDFA-KHTL---------TAPYNDLEAVEELFEEYGDEIAAVIVEP-VAGNMGVVPPKPGFLEGLR 224 (426)
T ss_pred cccc-CCCCCCCCCcccc-cceE---------EcCCCCHHHHHHHHHhCCCcEEEEEEeC-CcCCCCCcCCCHHHHHHHH
Confidence 1110 001111100 000 0000 0112578899988876667899999999 9999999999999999999
Q ss_pred HHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCC
Q psy8199 450 EICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 529 (965)
Q Consensus 450 ~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~ 529 (965)
++|++||+++|+||||+|| |+|.+++++++++.||+++|||++++| ||+|++++++++++.+... ..+.+++||+
T Consensus 225 ~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G-~p~ga~~~~~~i~~~~~~~---~~~~~~~T~~ 299 (426)
T PRK00062 225 ELCDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQLAPL---GPVYQAGTLS 299 (426)
T ss_pred HHHHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCC-CcceeeeEHHHHHHhhccC---CCceecccCc
Confidence 9999999999999999999 888888888899999999999999988 8999999999999988531 2245778999
Q ss_pred CCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCcc-------chhhHHH
Q psy8199 530 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE-------QIETFSK 601 (965)
Q Consensus 530 ~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~-------~~~~~~~ 601 (965)
+||++|++++++|+.++++++.+++++++++++++|+++ .+++.+..+++.|+|+++++...... .....+.
T Consensus 300 ~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~ 379 (426)
T PRK00062 300 GNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFA 379 (426)
T ss_pred CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHH
Confidence 999999999999999988889999999999999999887 55676778999999999999621110 0112345
Q ss_pred HHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 602 KFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 602 ~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
.+.+.|+++||++.+.+ +.++++ +++++++++++++++.+++.
T Consensus 380 ~i~~~l~~~Gv~v~~~~~~~~~~~--~~~t~~ei~~~~~~l~~~l~ 423 (426)
T PRK00062 380 RFFHAMLDEGVYLAPSQFEAGFVS--AAHTDEDIEKTLEAARKAFA 423 (426)
T ss_pred HHHHHHHHCCeEeecCCcCceeee--ccCCHHHHHHHHHHHHHHHH
Confidence 78899999999998865 567764 89999999999999876553
No 77
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=3.1e-51 Score=469.31 Aligned_cols=365 Identities=22% Similarity=0.330 Sum_probs=301.9
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.++||+||+|++|+++|++++.+ ..++++...+|+++|++.++ ..++|+|++||||
T Consensus 40 ~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~lae~l~~~~~-~~~~v~~~~sGse 115 (423)
T TIGR00713 40 AYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTS---YGAPTEAEILLAKEIISRVP-SVEMVRFVNSGTE 115 (423)
T ss_pred CEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc---CCCCCHHHHHHHHHHHHhCC-cccEEEEeCCHHH
Confidence 9999999999999999999999999999999999999988643 24578889999999999987 3579999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc--CccchhcccC-----CCeeEecCCCCCCCCCCC
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ--SFKEIYTSLL-----NKTYIITTPDSRNINKGN 398 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 398 (965)
|++.|+|+||.| +++++||+++++|||++..+++.++.. .....+.+.. +....+|
T Consensus 116 A~e~Alk~ar~~------~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 178 (423)
T TIGR00713 116 ATMSAVRLARGY------TGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLP----------- 178 (423)
T ss_pred HHHHHHHHHHHh------hCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeC-----------
Confidence 999999999998 578999999999999987777655421 1111111110 1112222
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccc
Q psy8199 399 SANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE 478 (965)
Q Consensus 399 ~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 478 (965)
++|+++|++++.++.+++++|++|| +++++|.+.++++|+++|+++|++||+++|+||||+|| |+|.+++++
T Consensus 179 ------~~d~~~l~~~i~~~~~~~aavi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~ 250 (423)
T TIGR00713 179 ------YNDLEALEEVFEEYGEEIAGVIVEP-VAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQE 250 (423)
T ss_pred ------CCCHHHHHHHHHHcCCcEEEEEEeC-CCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccc-ccCcchhHH
Confidence 2478899999976557899999999 89999998888999999999999999999999999999 898888888
Q ss_pred ccCCCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHH
Q psy8199 479 HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDM 558 (965)
Q Consensus 479 ~~~~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~ 558 (965)
++++.||++||||++++| +|+|++++++++++.+... ..+.+++||++||++|++++++|+.++++++.+++++++
T Consensus 251 ~~~~~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~~---~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~ 326 (423)
T TIGR00713 251 YFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAPE---GPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELA 326 (423)
T ss_pred HhCCCcchhhhhhhhcCC-CceeeeeEHHHHHHhhCcC---CCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 899999999999999988 8999999999999988631 224578999999999999999999998888999999999
Q ss_pred HHHHHHHHcc-cCCCceeeeeceeEEEEEEEeecCcc-------chhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCccc
Q psy8199 559 KKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE-------QIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYIL 629 (965)
Q Consensus 559 ~~l~~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~-------~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~ 629 (965)
+++++.|.++ .+++.+..+++.|+|+.+++...... ........+.+.|+++||++.+.+ +.+||+|+ +
T Consensus 327 ~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~l~~~--~ 404 (423)
T TIGR00713 327 KRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFLSAA--H 404 (423)
T ss_pred HHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCccceeeECC--C
Confidence 9999999876 55666668899999999988621100 011223467888999999987654 57899987 7
Q ss_pred CHHHHHHHHHhhhccc
Q psy8199 630 NKNEIQHMTSAIFQTF 645 (965)
Q Consensus 630 t~~~i~~~~~~l~~~~ 645 (965)
++++++++++++.+.+
T Consensus 405 t~~~i~~~~~~l~~~l 420 (423)
T TIGR00713 405 TEEDIENTIEAAEEVF 420 (423)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999887654
No 78
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.3e-50 Score=456.19 Aligned_cols=354 Identities=27% Similarity=0.440 Sum_probs=308.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.|||+||||.+|+|+.+|||+||+|++|+++|+++..+.+ ..+.++...++++++++..+ .++++|++||++
T Consensus 21 ~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~--~~~~~~~~sG~~ 97 (377)
T PRK02936 21 TKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVS-NLFTNSLQEEVASLLAENSA--GDLVFFCNSGAE 97 (377)
T ss_pred CEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccc-cccCCHHHHHHHHHHHhcCC--CCEEEEeCCcHH
Confidence 999999999999999999999999999999999999998864433 34567888999999998874 469999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|++.|+++++.+ +++++|++++++|||++.+++++++...++..+.+..+++.++|.
T Consensus 98 a~~~A~~~a~~~------~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 154 (377)
T PRK02936 98 ANEAALKLARKH------TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPF----------------- 154 (377)
T ss_pred HHHHHHHHHHHh------cCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCC-----------------
Confidence 999999999887 578899999999999999999988765555555555555555554
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
+|++++++.+. +++++|++|| +++++|.++++++|+++|+++|++||+++|+||||+||||+|.+++++++++.||
T Consensus 155 ~d~~~l~~~~~---~~~~~ii~e~-i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d 230 (377)
T PRK02936 155 NDIKALKEVMN---EEVAAVMLEV-VQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD 230 (377)
T ss_pred CCHHHHHHhcc---CCeEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc
Confidence 36788888774 4689999999 9999999989999999999999999999999999999999998888888899999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++||||++++| +|+|++++++++++.+.. ..+.+||++||++|++++++|+.+..+++.++++++++++++.|
T Consensus 231 i~t~sK~l~~G-~~ig~v~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L 303 (377)
T PRK02936 231 IVTVAKGLGNG-IPVGAMIGKKELGTAFGP------GSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKL 303 (377)
T ss_pred EEEEcccccCC-CccEEEEEcHHHHhhccC------CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 99999999988 799999999999988754 24678999999999999999999877788999999999999999
Q ss_pred Hcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 566 TSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 566 ~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+++ .+++.+..+++.|.++++++. + . ...+.+.|.++||++.|.+ +++||+||+.+++++++++++++.+
T Consensus 304 ~~~~~~~~~~~~v~~~g~~~~i~~~--~-----~-~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~ 375 (377)
T PRK02936 304 QEELEHLECVKNIRGKGLMIGIECT--E-----E-VAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKK 375 (377)
T ss_pred HHHHhhCCcEEeEeecceEEEEEec--c-----h-HHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 885 567777788999999999885 2 1 4467788999999999876 7999999999999999999998865
Q ss_pred c
Q psy8199 644 T 644 (965)
Q Consensus 644 ~ 644 (965)
+
T Consensus 376 ~ 376 (377)
T PRK02936 376 V 376 (377)
T ss_pred h
Confidence 3
No 79
>COG0502 BioB Biotin synthase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=1.9e-50 Score=420.34 Aligned_cols=309 Identities=54% Similarity=0.893 Sum_probs=287.4
Q ss_pred ccccHHHHHHhcCCCchh-HHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHH
Q psy8199 644 TFNELDEVINLFNLPFND-LLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVIT 722 (965)
Q Consensus 644 ~~~~~~e~l~l~~~~~~~-l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~ 722 (965)
...+.++++.++..+..+ ++..|+...|++|+|+.|.++++|+++|..||.+|.||+|++++..+...++.+++|+|++
T Consensus 12 ~~~~~~e~~~l~~~~~~~~~L~~aA~~~R~~~~g~~V~l~~ii~iktg~c~edC~yC~qS~~~~~~~~~~~l~~~eeIle 91 (335)
T COG0502 12 ERWTLDEALALLDLPDEDELLFEAAQKHRLHFDGNEVQLSTLISIKTGCCPEDCAYCSQSARYKTGVKARKLMEVEEILE 91 (335)
T ss_pred CCcCHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCeEEEEEEEEeecCCCCCCCCCccccccCcCCCchhhcCCHHHHHH
Confidence 456788888888766555 5555555556777799999999999988888999999999998877778888899999999
Q ss_pred HHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHH-hcCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHh
Q psy8199 723 AAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVK-KIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYG 801 (965)
Q Consensus 723 ~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~-~~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~ 801 (965)
.|+.+++.|+.++++++++.. ..++.+++.++++.++ +.+++++++.|.++++.+++|++||++++++++||+++.|+
T Consensus 92 ~Ak~ak~~Ga~r~c~~aagr~-~~~~~~~i~~~v~~Vk~~~~le~c~slG~l~~eq~~~L~~aGvd~ynhNLeTs~~~y~ 170 (335)
T COG0502 92 AAKKAKAAGATRFCMGAAGRG-PGRDMEEVVEAIKAVKEELGLEVCASLGMLTEEQAEKLADAGVDRYNHNLETSPEFYE 170 (335)
T ss_pred HHHHHHHcCCceEEEEEeccC-CCccHHHHHHHHHHHHHhcCcHHhhccCCCCHHHHHHHHHcChhheecccccCHHHHc
Confidence 999999999999999999887 6688999999999999 58999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHH
Q psy8199 802 DIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLE 881 (965)
Q Consensus 802 ~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~ 881 (965)
+|+++++|++++++++.++++|+.++++.|+|+|||.+|+++++..|+++.. +++||++.|+|.|||||++.++.++.+
T Consensus 171 ~I~tt~t~edR~~tl~~vk~~Gi~vcsGgI~GlGEs~eDri~~l~~L~~l~~-pdsVPIn~l~P~~GTPle~~~~~~~~e 249 (335)
T COG0502 171 NIITTRTYEDRLNTLENVREAGIEVCSGGIVGLGETVEDRAELLLELANLPT-PDSVPINFLNPIPGTPLENAKPLDPFE 249 (335)
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCccccceEecCCCCHHHHHHHHHHHHhCCC-CCeeeeeeecCCCCCccccCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999986 999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEeeCCccccCCCCCChhhHHHHHHcCCCcchh
Q psy8199 882 FIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKLGINTRNI 954 (965)
Q Consensus 882 ~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~~~~~g~~~~~~ 954 (965)
.+|+||++|+++|+..|+++++++.+.++.+..++.+|||++++|+.++|+.|.+.++|.+|++.+|+.+...
T Consensus 250 ~lk~IA~~Ri~~P~~~Ir~s~gr~~~~~~~q~~~~~aGansi~~g~~~ltt~~~~~e~D~~~l~~lgl~~e~~ 322 (335)
T COG0502 250 FLKTIAVARIIMPKSMIRLSAGRETMLPELQALAFMAGANSIFVGDKYLTTPGPDEDKDLELLKDLGLEPELL 322 (335)
T ss_pred HHHHHHHHHHHCCcceeEccCCcccccHHHHHHHHHhccceeeecceEeecCCCCchhHHHHHHHcCCCcccc
Confidence 9999999999999999999999999999999999999999999999777888889999999999999998754
No 80
>PRK15108 biotin synthase; Provisional
Probab=100.00 E-value=5.1e-50 Score=436.63 Aligned_cols=314 Identities=56% Similarity=0.966 Sum_probs=289.3
Q ss_pred ccccHHHHHHhcCCCchhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHH
Q psy8199 644 TFNELDEVINLFNLPFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITA 723 (965)
Q Consensus 644 ~~~~~~e~l~l~~~~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~ 723 (965)
...+.+|++.|++.++.+++..|+++|+++|++++++++++++++|++|+++|.||+|++........++.+++|||++.
T Consensus 5 ~~l~~~e~~~l~~~~l~~l~~~A~~ir~~~fg~~~v~l~~i~~~~Tn~C~~~C~yC~~~~~~~~~~~~~~~ls~eEI~~~ 84 (345)
T PRK15108 5 PRWTLSQVTELFEKPLLELLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLES 84 (345)
T ss_pred CCCCHHHHHHHHcccHHHHHHHHHHHHHHhcCCCEEEEEEeEEEECCCcCCCCcCCCCcccCCCCCCcccCCCHHHHHHH
Confidence 45678899999988899999999999999996678999999999999999999999998754444455667999999999
Q ss_pred HHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhcc
Q psy8199 724 AQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDI 803 (965)
Q Consensus 724 ~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i 803 (965)
++.+.+.|+++|++++++..+...++++++++++.+|+.++.++++.|.++++.+++||+||++++++++||+++.|+++
T Consensus 85 a~~~~~~G~~~i~i~~~g~~p~~~~~e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~~leT~p~~f~~I 164 (345)
T PRK15108 85 ARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNI 164 (345)
T ss_pred HHHHHHcCCCEEEEEecCCCCCcchHHHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEeeccccChHhcCCC
Confidence 99999999999999877543345678999999999999899999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHH
Q psy8199 804 ISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFI 883 (965)
Q Consensus 804 ~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~ 883 (965)
++++++++|+++++.++++|+.+++++|+|+|||.+|+++++..++++++.+++|+++.|+|.+||||++.++.++.+.+
T Consensus 165 ~~~~~~~~rl~~i~~a~~~G~~v~sg~i~GlgEt~ed~v~~~~~l~~l~~~~~~ip~~~~~P~~gTpl~~~~~~~~~e~l 244 (345)
T PRK15108 165 ITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFI 244 (345)
T ss_pred CCCCCHHHHHHHHHHHHHcCCceeeEEEEeCCCCHHHHHHHHHHHHhccCCCCEEEeCCccCCCCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999953267999999999999999998889999999
Q ss_pred HHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEeeCCccccCCCCCChhhHHHHHHcCCCcchhhhH
Q psy8199 884 RTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKLGINTRNIKIK 957 (965)
Q Consensus 884 ~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~~~~~g~~~~~~~~~ 957 (965)
|++|++|+++|+..++++++|+.++.+.++.+|.+|||++|+|++++|+.|.+.++|.+||+++|++|++++..
T Consensus 245 r~iAi~Rl~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~ltt~g~~~~~~~~~i~~~g~~~~~~~~~ 318 (345)
T PRK15108 245 RTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVL 318 (345)
T ss_pred HHHHHHHHHCCCceeeecccHhHhChhhHHHHHHcCCcEEEECCccccCCCCCHHHHHHHHHHcCCCccccccc
Confidence 99999999999999999999998889999999999999999999877888999999999999999999988753
No 81
>PLN02389 biotin synthase
Probab=100.00 E-value=4.4e-50 Score=438.32 Aligned_cols=311 Identities=49% Similarity=0.848 Sum_probs=285.8
Q ss_pred ccccHHHHHHhcCCCchhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHH
Q psy8199 644 TFNELDEVINLFNLPFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITA 723 (965)
Q Consensus 644 ~~~~~~e~l~l~~~~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~ 723 (965)
...+.+|++.|+..++.+|+..|+++|+++++|+.|+++.+++++|++|+++|.||+|++.++.....|+.+++|+|++.
T Consensus 45 ~~lt~~e~l~L~~~~l~~l~~~A~~vr~~~~~~~~v~~~~i~n~~T~~C~~~C~fCaqs~~~~~~~~~~~~Ls~EeIl~~ 124 (379)
T PLN02389 45 NDWTRDEIKEVYDSPLLDLLFHGAQVHRHAHDPREVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKAQKLMSKDDVLEA 124 (379)
T ss_pred CCCCHHHHHHHHcCcHHHHHHHHHHHHHHhcCCCEEEEEEEEEeccCCcCcCCCCCCCcccCCCCCcccccCCHHHHHHH
Confidence 34678899999877899999999999999887779999999999999999999999998765555556777999999999
Q ss_pred HHHHHHCCCCEEEEeeccCCCCc--ccHHHHHHHHHHHHhcCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHh
Q psy8199 724 AQKAKSDGATRFCMGAAWRELKD--RDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYG 801 (965)
Q Consensus 724 ~~~~~~~g~~~i~l~~g~~~~~~--~~~~~~~~~~~~i~~~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~ 801 (965)
++++.+.|+++|++++++..... ..+++++++++.+|+.++.++.+.|.++++.+++||+||++++++++||+++.|+
T Consensus 125 a~~~~~~G~~~~~ivts~rg~~~e~~~~e~i~eiir~ik~~~l~i~~s~G~l~~E~l~~LkeAGld~~~~~LeTs~~~y~ 204 (379)
T PLN02389 125 AKRAKEAGSTRFCMGAAWRDTVGRKTNFNQILEYVKEIRGMGMEVCCTLGMLEKEQAAQLKEAGLTAYNHNLDTSREYYP 204 (379)
T ss_pred HHHHHHcCCCEEEEEecccCCCCChhHHHHHHHHHHHHhcCCcEEEECCCCCCHHHHHHHHHcCCCEEEeeecCChHHhC
Confidence 99999999999999865432112 3589999999999988999999999999999999999999999999999989999
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHH
Q psy8199 802 DIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLE 881 (965)
Q Consensus 802 ~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~ 881 (965)
++++++++++|+++++.++++|+++++++|+|+|||.+|+++++..+++++..++.+++++|+|.|||||++.+++++.+
T Consensus 205 ~i~~~~s~e~rl~ti~~a~~~Gi~v~sg~IiGlgEt~edrv~~l~~Lr~L~~~~~~v~l~~l~P~~GTpL~~~~~~s~~e 284 (379)
T PLN02389 205 NVITTRSYDDRLETLEAVREAGISVCSGGIIGLGEAEEDRVGLLHTLATLPEHPESVPINALVAVKGTPLEDQKPVEIWE 284 (379)
T ss_pred CcCCCCCHHHHHHHHHHHHHcCCeEeEEEEECCCCCHHHHHHHHHHHHhcccCCcEEecccceecCCCcCCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999433899999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEeeCCccccCCCCCChhhHHHHHHcCCCcchh
Q psy8199 882 FIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKLGINTRNI 954 (965)
Q Consensus 882 ~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~~~~~g~~~~~~ 954 (965)
++|++|++|+++|+..++++++|..++.+.++.+|.+|||++|+|++++|+.|.++++|++||+++|+.+...
T Consensus 285 ~lr~iAi~Rl~lP~~~i~i~~gr~~l~~~~~~~~l~~GAN~~~~g~~~Ltt~g~~~~~d~~~~~~lg~~~~~~ 357 (379)
T PLN02389 285 MVRMIATARIVMPKAMVRLSAGRVRFSMAEQALCFLAGANSIFTGDKLLTTPNNDFDADQAMFKELGLIPKPP 357 (379)
T ss_pred HHHHHHHHHHHCCCccccccccccccChhHHHHHHHhCCCEEEECCcccCCCCCChHHHHHHHHHcCCCcccc
Confidence 9999999999999999999999998889999999999999999999878999999999999999999998743
No 82
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.1e-49 Score=454.18 Aligned_cols=364 Identities=25% Similarity=0.416 Sum_probs=312.3
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.||++|||+.+++++.++||+||+|.+|+++|++++.+.+ ....++...+++++|+++++ .++++|++||++
T Consensus 33 ~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~ 109 (401)
T PRK00854 33 VWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTS-RAFRNDQLAPLYEELAALTG--SHKVLPMNSGAE 109 (401)
T ss_pred CEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccc-cccCCHHHHHHHHHHHhhCC--CCEEEEeCCcHH
Confidence 899999999999999999999999999999999999999876543 24567889999999999985 479999999999
Q ss_pred HHHHHHHHHHHHHHhc-CCC-CceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 326 AVEVALKMSFHYWYNK-GFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~-g~~-~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
|++.|+++++.+++.+ |.+ ++++||+++.+|||++.+++++++.+..+..+.+..+++.++|.
T Consensus 110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 174 (401)
T PRK00854 110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF--------------- 174 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC---------------
Confidence 9999999999875332 332 56799999999999999888887766555555666666666654
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 404 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 404 ~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
+|+++|++++. +++++|++|| ++|++|.+.++++||++|+++|++||+++|+||+|+|||++|.+++.+++++.
T Consensus 175 --~d~~~le~~i~---~~~~aii~e~-~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~ 248 (401)
T PRK00854 175 --GDAEALEAAIT---PNTVAFLVEP-IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIE 248 (401)
T ss_pred --CCHHHHHHHhC---CCeEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCC
Confidence 36788888884 4689999999 99999999999999999999999999999999999999999988777788999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 563 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~ 563 (965)
||++++||+++||++|+|++++++++++.+.. ..++.||+++|+++++++++|+.++++++.++++++++++.+
T Consensus 249 ~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~------~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~ 322 (401)
T PRK00854 249 ADVTLIGKALSGGFYPVSAVLSNSEVLGVLKP------GQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLE 322 (401)
T ss_pred CCEEEecccccCCccCeEEEEEcHHHHhcccC------CCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 99999999999998899999999999987754 347789999999999999999998877789999999999999
Q ss_pred HHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-CCEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 564 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 564 ~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
.|+++. .+.+..+++.|.|+.+.+. .+ ......+.+.|.++||++.+. ++++||+||+.+++++++++++++.
T Consensus 323 ~L~~~~-~~~~~~~~g~g~~~~i~~~-~~----~~~~~~~~~~L~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~ 396 (401)
T PRK00854 323 GLRSIR-SNIVREVRGRGLMLAVELE-PE----AGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIA 396 (401)
T ss_pred HHHhhc-cCceEEEeccceEEEEEEe-cC----chhHHHHHHHHHHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 998873 2335678899999999885 22 112456888999999999875 4799999999999999999999987
Q ss_pred ccc
Q psy8199 643 QTF 645 (965)
Q Consensus 643 ~~~ 645 (965)
+.+
T Consensus 397 ~~l 399 (401)
T PRK00854 397 KVL 399 (401)
T ss_pred HHh
Confidence 643
No 83
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=8.9e-49 Score=447.28 Aligned_cols=370 Identities=28% Similarity=0.436 Sum_probs=310.2
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.|||+|||+.+|+++.++||+||+|++|+.++++.+++.+. .+.++...++++.+++.. +.++++|++|||+
T Consensus 23 ~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~--~~~~~~~~~SGs~ 99 (400)
T PTZ00125 23 VFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSR-AFYNDVLGLAEKYITDLF--GYDKVLPMNSGAE 99 (400)
T ss_pred CEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHHhCC--CCCEEEEeCCcHH
Confidence 8999999999999999999999999999999999999988765442 344677788888888876 4689999999999
Q ss_pred HHHHHHHHHHHHHHhc-CC-CCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 326 AVEVALKMSFHYWYNK-GF-LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~-g~-~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
||+.|+++++.++..+ |. +++++|++++++|||++.++++.++...+...+.+..++...++.
T Consensus 100 A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 164 (400)
T PTZ00125 100 AGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY--------------- 164 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC---------------
Confidence 9999999998764322 22 256889999999999999999888754333333343334434333
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 404 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 404 ~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
+|+++|+++++ .+++++|++|| ++|++|.+.++++|+++|+++|++||+++|+||||+||||+|++++.+++++.
T Consensus 165 --~d~~~le~~l~--~~~~~~v~~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~ 239 (400)
T PTZ00125 165 --NDVEALEKLLQ--DPNVAAFIVEP-IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVK 239 (400)
T ss_pred --CCHHHHHHHhC--CCCeEEEEEcC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCC
Confidence 47899999885 35799999999 89999999999999999999999999999999999999999998888888999
Q ss_pred cceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Q psy8199 484 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 563 (965)
Q Consensus 484 pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~ 563 (965)
||++++||++++|++|+|++++++++++.+.. ..++.|++++|++++++.++|+.+.++++.++++++++++++
T Consensus 240 pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~------~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~ 313 (400)
T PTZ00125 240 PDIVLLGKALSGGLYPISAVLANDDVMLVIKP------GEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRD 313 (400)
T ss_pred CCEEEEcccccCCCcCcEEEEEcHHHHhhccC------CCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 99999999999997899999999999988754 246788999999999999999998877899999999999999
Q ss_pred HHHcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhh
Q psy8199 564 ALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 564 ~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
+|+++ ..++.+..+++.|+|+++.+...+ ......+.+.|.++||++.|.+ +.+||+|++.+++++++++++++
T Consensus 314 ~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~----~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l 389 (400)
T PTZ00125 314 GLKELLKKSPWVKEIRGKGLLNAIVFDHSD----GVNAWDLCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEII 389 (400)
T ss_pred HHHHHHhcCCCeEEEecccEEEEEEEccCc----chHHHHHHHHHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHHHH
Confidence 99887 455666778999999999875111 1234567888999999998865 79999999999999999999999
Q ss_pred hcccccH
Q psy8199 642 FQTFNEL 648 (965)
Q Consensus 642 ~~~~~~~ 648 (965)
.+.+..+
T Consensus 390 ~~~l~~~ 396 (400)
T PTZ00125 390 KKVLKSF 396 (400)
T ss_pred HHHHHHH
Confidence 8765443
No 84
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=4.3e-49 Score=447.79 Aligned_cols=361 Identities=17% Similarity=0.261 Sum_probs=283.3
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.|||+|||+.+|+|+.+|||+||+|++|+++|++++.. ....+....+++++|++.+| +.++|+|++||||
T Consensus 40 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~---~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGse 115 (431)
T PRK06209 40 AHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN---FTRPSAIELDAAESFLELID-GADMVKFCKNGSD 115 (431)
T ss_pred CEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC---CCCCCHHHHHHHHHHHHhCC-ccceEEEecCHHH
Confidence 9999999999999999999999999999999999999998643 23456667789999999987 5689999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEE-cCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICL-QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~-~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
|++.|+|+||.| ++|.+|+.+ .++|||+.......+.... .........+ ..+.
T Consensus 116 A~e~AlklAr~~------tgr~~i~~~~~~~~h~~~~~~~g~~~~~~------~~~~~~~~~~-------------~~~~ 170 (431)
T PRK06209 116 ATSAAVRLARAY------TGRDLVARCADHPFFSTDDWFIGTTPMSA------GIPASVSALT-------------VTFR 170 (431)
T ss_pred HHHHHHHHHHHH------hCCCeEEEeccCccccccccccccCCCCC------CCChhHhccc-------------cccC
Confidence 999999999998 578899999 6788874222111000000 0000000000 0123
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCc
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 484 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 484 (965)
++|+++|+++++++.+++++|++|| ++++ .|+++||++|+++|++||+++|+|||+|||++++ +++.+++++.|
T Consensus 171 ~~d~~~l~~~l~~~~~~~aavi~Ep-v~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-~g~~~~~gv~P 244 (431)
T PRK06209 171 YNDIASLEALFEDHPGRIACVILEP-ATAD----EPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-RGAQKLYGIVP 244 (431)
T ss_pred CCCHHHHHHHHHhCCCCEEEEEEcc-ccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-chhhHHhCCCc
Confidence 3688999999976667899999999 7766 6789999999999999999999999999997753 33445689999
Q ss_pred ceeeeccccCCCcccceeeeecHHHHHh--hhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy8199 485 DFLCLSKGITGGYLPLSLVMTTDKIYNS--IYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 562 (965)
Q Consensus 485 Divt~sK~l~gG~~pig~v~~~~~i~~~--~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~ 562 (965)
|++|+||++||| +|+|++++++++++. +......+.+.|++||++||++|++++++|++++++++.+++++++++|+
T Consensus 245 Di~t~gK~lggG-~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~ 323 (431)
T PRK06209 245 DLSCFGKALGNG-FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLA 323 (431)
T ss_pred ceeeehhhhcCC-cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 999999999999 699999999999987 32111234567899999999999999999999998899999999999999
Q ss_pred HHHHcc-cCCCceeeeeceeEEEEEEEeecC--ccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHH
Q psy8199 563 KALTSL-ITHPKIINFRQKGMIWAFDVIIED--PEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTS 639 (965)
Q Consensus 563 ~~L~~l-~~~~~i~~v~g~G~~~~i~~~~~~--~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~ 639 (965)
++|+++ .+++.+..+++.|.++.+.+...+ +.+.......+.+.|+++|+++.| ++++ ..+++++|+++++
T Consensus 324 ~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~----l~is--~~ht~~dId~~l~ 397 (431)
T PRK06209 324 AGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS----LVVS--YAHGDADIERTID 397 (431)
T ss_pred HHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccccc----cccc--ccCCHHHHHHHHH
Confidence 999887 556766788999998888875211 111223344677889999998733 3344 6789999999999
Q ss_pred hhhcccccH
Q psy8199 640 AIFQTFNEL 648 (965)
Q Consensus 640 ~l~~~~~~~ 648 (965)
++.+++..+
T Consensus 398 ~l~~~l~~~ 406 (431)
T PRK06209 398 AVHGALGVY 406 (431)
T ss_pred HHHHHHHHH
Confidence 998766543
No 85
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-47 Score=432.99 Aligned_cols=352 Identities=27% Similarity=0.416 Sum_probs=297.6
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+||||.||++|||+.+++++.+||| ||+|++|+.+|+++..++. ..+.++...++++.+... ....++|++||||
T Consensus 21 ~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~---~~~~~~~~~SGse 95 (375)
T PRK04260 21 NYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSP-NLYLNSLQEEVAQKLIGD---KDYLAFFCNSGAE 95 (375)
T ss_pred CEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCccc-CccCCHHHHHHHHHHhcC---cCCEEEEcCccHH
Confidence 9999999999999999999999999 9999999999998764332 235566777777776542 2236899999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||+.|+++++.+ +++++|++++++|||++.++++.++...+...+.+....+.+.+.
T Consensus 96 A~~~Al~~ar~~------~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 152 (375)
T PRK04260 96 ANEAAIKIARKA------TGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIF----------------- 152 (375)
T ss_pred HHHHHHHHHHHh------cCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCC-----------------
Confidence 999999999987 578899999999999999999888755444333332222222211
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
+|++++++++. +++++|++|| +++++|.+.++.+||++++++|+++|+++|+||+|+|||++|.+++++.+++.||
T Consensus 153 ~dl~~l~~~l~---~~~a~vi~e~-v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd 228 (375)
T PRK04260 153 NDLNSVKALVN---KNTAAVMLEL-VQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD 228 (375)
T ss_pred CCHHHHHHhcC---CCeEEEEECC-eECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC
Confidence 47888888774 4689999999 9999999999999999999999999999999999999999998888888899999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++||||++++| +|+|++++++++++.+.. ..+.+||++||++|+++.++|+.++.+++.+++++.++++++.|
T Consensus 229 i~t~sK~l~~G-~~ig~~~~~~~~~~~~~~------~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l 301 (375)
T PRK04260 229 IFTLAKGLANG-VPVGAMLAKSSLGGAFGY------GSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQL 301 (375)
T ss_pred EEEecccccCC-cceEEEEEcHHHHhhcCC------CCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999988 799999999999888754 24778999999999999999999987789999999999999999
Q ss_pred Hcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 566 TSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 566 ~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
.++ .+++.+..+++.|+++++++. .+ ...+.+.|.++||++.|.+ +.+||+||+.+++++++++++++.+
T Consensus 302 ~~~~~~~~~~~~~~~~g~~~~~~~~-~~-------~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~ 373 (375)
T PRK04260 302 QKALQDKETVTTVRGLGYMIGIETT-AD-------LSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSE 373 (375)
T ss_pred HHHHhhCCCeeEEeccceEEEEEec-Cc-------HHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHH
Confidence 876 556667788999999999984 11 3468889999999998865 7899999999999999999998865
Q ss_pred c
Q psy8199 644 T 644 (965)
Q Consensus 644 ~ 644 (965)
+
T Consensus 374 ~ 374 (375)
T PRK04260 374 V 374 (375)
T ss_pred h
Confidence 3
No 86
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=5.8e-47 Score=435.23 Aligned_cols=380 Identities=36% Similarity=0.584 Sum_probs=319.7
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.||++|||+.+|++++++||+||+|++|+.++++...++....+.++...++++++++.++.+.++++|++||++
T Consensus 28 ~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgse 107 (413)
T cd00610 28 AYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTE 107 (413)
T ss_pred CEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHH
Confidence 89999999999999999999999999999999999999876555433346889999999999999766889999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|++.|+++++.+ +++++|++++++|||++..++..++...+...+.+...++..+|.+..... .....
T Consensus 108 a~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 175 (413)
T cd00610 108 AVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRP------PAELA 175 (413)
T ss_pred HHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccc------hhhHH
Confidence 999999999877 578999999999999999998888765555555555555666665421110 01123
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
.|+++|+++++++++++++|++|| +++++|.+.++++|+++|+++|++||+++|+||+|+||||+|..++++++++.||
T Consensus 176 ~d~~~l~~~l~~~~~~~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d 254 (413)
T cd00610 176 DDLEALEEALEEHPEEVAAVIVEP-IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPD 254 (413)
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCC
Confidence 488999999976556899999999 9999999999999999999999999999999999999999998888888999999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++++||++++| +|+|++++++++++.+.. ..+.+++|+++||++++++.++|+.++++++.++++++++++++.|
T Consensus 255 ~~t~sK~l~~g-~~~g~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l 329 (413)
T cd00610 255 IVTLGKGLGGG-LPLGAVLGREEIMDAFPA----GPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERL 329 (413)
T ss_pred eEEEcccccCc-cccEEEEEcHHHHHhhcc----CCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 99999999998 899999999999988611 2245778999999999999999999987889999999999999999
Q ss_pred HcccC-CCceeeeeceeEEEEEEEeecCcc---chhhHHHHHHHHHHHcCcEEeec-CCEEEEeCCcccCHHHHHHHHHh
Q psy8199 566 TSLIT-HPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSA 640 (965)
Q Consensus 566 ~~l~~-~~~i~~v~g~G~~~~i~~~~~~~~---~~~~~~~~~~~~l~~~Gi~~~~~-~~~lR~~p~~~~t~~~i~~~~~~ 640 (965)
+++.. .+.+..+++.|.++.+.+. .+.. ........+.+.|.++||++.|. ++.+|++|++.++++++++++++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t~~~i~~~~~~ 408 (413)
T cd00610 330 RELAEKHPLVGDVRGRGLMIGIELV-KDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDA 408 (413)
T ss_pred HHHHhhCCcEEEeecCceEEEEEEe-cCCCcCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHH
Confidence 88733 4556678899999999986 2110 01123556888999999999987 47999999999999999999998
Q ss_pred hhcc
Q psy8199 641 IFQT 644 (965)
Q Consensus 641 l~~~ 644 (965)
+.++
T Consensus 409 l~~~ 412 (413)
T cd00610 409 LDEA 412 (413)
T ss_pred HHHh
Confidence 8653
No 87
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3.7e-47 Score=433.88 Aligned_cols=360 Identities=33% Similarity=0.542 Sum_probs=307.8
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+|+||.|||+|||+.+|+++++|||+||+|.+|+.+++++..+.. ..+.++...+++++|++.. +.++++|++||+|
T Consensus 31 ~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~--~~~~v~~~~gg~e 107 (396)
T PRK02627 31 ARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTS-NLYYIEPQEELAEKLVELS--GMDKVFFCNSGAE 107 (396)
T ss_pred CEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccc-cccCCHHHHHHHHHHHhhc--CCCEEEECCCcHH
Confidence 899999999999999999999999999999999999998764432 3467899999999999986 5689999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|+++|+++++.+....+. +++++++++++|||++..++++++...++..+.+...+...++.
T Consensus 108 A~~~al~~a~~~~~~~~~-~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 169 (396)
T PRK02627 108 ANEAAIKLARKYGHKKGI-EKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPF----------------- 169 (396)
T ss_pred HHHHHHHHHHHHhcccCC-CCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCC-----------------
Confidence 999999999987422221 23789999999999999999888765544444444444444443
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
+|++++++++. +++++|++|| +++++|..+++++++++|+++|++||+++|+||+|+||||+|.+++++.+++.||
T Consensus 170 ~d~~~l~~~i~---~~~~~vii~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd 245 (396)
T PRK02627 170 NDIEALKAAIT---DKTAAVMLEP-IQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD 245 (396)
T ss_pred CCHHHHHHhcC---CCeEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC
Confidence 47888888883 5789999999 8999998888999999999999999999999999999999998888888899999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
+++|||++++| +|+|++++++++++.+.. ..+.+||++||++|+++.++|+.++++++.++++++++++++.|
T Consensus 246 i~t~sK~~~~G-~rig~~~~~~~~~~~~~~------~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l 318 (396)
T PRK02627 246 IMTLAKGLGGG-VPIGAVLAKEKVADVFTP------GDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKL 318 (396)
T ss_pred EEEEcchhhCC-cccEEEEEcHHHHhccCC------CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 99999999988 799999999999988754 24778999999999999999999887889999999999999999
Q ss_pred Hcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 566 TSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 566 ~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
.++ .+++.+..+++.|+++++++. .+ ...+.+.|.++||++.|.+ +++||+|++.+++++++++++++.+
T Consensus 319 ~~~~~~~~~~~~~~~~g~~~~i~~~-~~-------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 390 (396)
T PRK02627 319 RELLEKYPGIKEVRGLGLMIGIELD-RP-------AAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEE 390 (396)
T ss_pred HHHHHhCCCeeeeccCcEEEEEEec-Cc-------HHHHHHHHHHCCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 887 556667788899999998873 11 3468888999999999865 7899999999999999999999876
Q ss_pred cc
Q psy8199 644 TF 645 (965)
Q Consensus 644 ~~ 645 (965)
.+
T Consensus 391 ~l 392 (396)
T PRK02627 391 VL 392 (396)
T ss_pred HH
Confidence 54
No 88
>PRK06256 biotin synthase; Validated
Probab=100.00 E-value=1.2e-44 Score=399.91 Aligned_cols=320 Identities=35% Similarity=0.612 Sum_probs=286.7
Q ss_pred HHHHHHHhhhc-ccccHHHHHHhcCC---CchhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCC
Q psy8199 633 EIQHMTSAIFQ-TFNELDEVINLFNL---PFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTE 708 (965)
Q Consensus 633 ~i~~~~~~l~~-~~~~~~e~l~l~~~---~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~ 708 (965)
++..+.+++.. ...+.++++.||+. ++.+|+..|+++|++++ |+.+.++.+++++|++|+++|.||+++..++..
T Consensus 6 ~~~~~~~~~~~g~~~~~~e~~~ll~~~~~~~~~L~~~A~~~r~~~~-g~~v~~~~i~~~~s~~C~~~C~fC~~~~~~~~~ 84 (336)
T PRK06256 6 DILKLARKLLEGEGLTKEEALALLEIPDDDLLELLAAAYEVRKHFC-GKKVKLNTIINAKSGLCPEDCGYCSQSAGSSAP 84 (336)
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHcCChHHHHHHHHHHHHHHHHhC-CCeEEEEEeeeccCCCCCCCCccCCCcCCCCCC
Confidence 45556666654 56788999999864 36788999999977766 899999999998899999999999998765544
Q ss_pred cccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHh-cCcEeEEecCCCCHHHHHHHHHhCCC
Q psy8199 709 ITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLD 787 (965)
Q Consensus 709 ~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~-~~~~i~~~~~~~~~e~l~~Lk~aG~~ 787 (965)
...++.+++|+|+++++.+.+.|+.++++++++..+...++++++++++.+++ .++.++++.|.++++.++.|+++|++
T Consensus 85 ~~~~~~~s~eeI~~~~~~~~~~g~~~~~l~~~g~~p~~~~~~~~~e~i~~i~~~~~i~~~~~~g~l~~e~l~~LkeaG~~ 164 (336)
T PRK06256 85 VYRYAWLDIEELIEAAKEAIEEGAGTFCIVASGRGPSGKEVDQVVEAVKAIKEETDLEICACLGLLTEEQAERLKEAGVD 164 (336)
T ss_pred CceecCCCHHHHHHHHHHHHHCCCCEEEEEecCCCCCchHHHHHHHHHHHHHhcCCCcEEecCCcCCHHHHHHHHHhCCC
Confidence 44577789999999999999999999999887765555567899999999986 56788899999999999999999999
Q ss_pred eEeccCCCCHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccC
Q psy8199 788 YYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIK 867 (965)
Q Consensus 788 ~i~i~~es~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~ 867 (965)
++.+++||+++.++++++.+++++++++++.++++|+.+++++|+|+|||.+|+.++++++++++ ++.++++.|+|.|
T Consensus 165 ~v~~~lEts~~~~~~i~~~~t~~~~i~~i~~a~~~Gi~v~~~~I~GlgEt~ed~~~~~~~l~~l~--~~~v~i~~l~P~p 242 (336)
T PRK06256 165 RYNHNLETSRSYFPNVVTTHTYEDRIDTCEMVKAAGIEPCSGGIIGMGESLEDRVEHAFFLKELD--ADSIPINFLNPIP 242 (336)
T ss_pred EEecCCccCHHHHhhcCCCCCHHHHHHHHHHHHHcCCeeccCeEEeCCCCHHHHHHHHHHHHhCC--CCEEeecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEeeCCccccCCCCCChhhHHHHHHc
Q psy8199 868 GTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKL 947 (965)
Q Consensus 868 gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~~~~~ 947 (965)
|||+++.+++++.++++++|++|+++|+..|+++++|+....+.+..++ +|||++|+|++ +|+.|.+.++|++||+++
T Consensus 243 GT~l~~~~~~~~~e~l~~ia~~Rl~~p~~~I~~~~gr~~~~~~~~~~~~-~g~~~~~~g~~-lt~~g~~~~~d~~~~~~~ 320 (336)
T PRK06256 243 GTPLENHPELTPLECLKTIAIFRLINPDKEIRIAGGREVNLRSLQPLGL-GGANSVIVGNY-LTTVGQPATADLDMIEDL 320 (336)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCeeEecCchhhhchhhHHHHh-ccCceeeECCc-ccCCCCChHHHHHHHHHC
Confidence 9999999999999999999999999999999999999877788888888 89999999996 577788999999999999
Q ss_pred CCCcchhhhH
Q psy8199 948 GINTRNIKIK 957 (965)
Q Consensus 948 g~~~~~~~~~ 957 (965)
|+.+...+.+
T Consensus 321 g~~~~~~~~~ 330 (336)
T PRK06256 321 GFEIELDALK 330 (336)
T ss_pred CCCcccCcch
Confidence 9998665544
No 89
>COG0564 RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.2e-45 Score=387.00 Aligned_cols=229 Identities=46% Similarity=0.647 Sum_probs=192.7
Q ss_pred cccCCEEEEEcCCCCCCCCcccccCCCccEEEecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccc
Q psy8199 2 IISGYELIIIKPKKNFFLNKTEKKVIKLDIIYEDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVH 81 (965)
Q Consensus 2 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 81 (965)
|..||+|.+..++.... .........++|||||++++|+|||+|++|||+.+....++...+..+.+.. ..++++||
T Consensus 52 l~~gd~i~~~~~~~~~~-~~~~~~~~~l~IlyED~~llVvnKP~Gl~vhp~~~~~~~tl~~~l~~~~~~~--~~~~~~vH 128 (289)
T COG0564 52 LKPGDVVRIPLPEEPEE-EKLVPEDIPLDILYEDEDLLVVNKPAGLVVHPGGGHHEGTLVNALLRHCQDG--VERPGIVH 128 (289)
T ss_pred eCCCCEEEEeccccccc-ccccccCCCccEEEecCCEEEEECCCCCcCcCCCCCccHhHHHHHHHhcccc--CCceeeec
Confidence 56788887755443321 1122233348899999999999999999999998777788999887775432 45789999
Q ss_pred cCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEEEEEcCccCCC-ceEeeccccCCCCCeeEEEccCCCCcceEEEEE
Q psy8199 82 RLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYLAMVWGIPKLN-GMINAAIMRNPHNRIKMTVSKNFNAKPALTYYE 160 (965)
Q Consensus 82 RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~a~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 160 (965)
||||+||||||||||..+++.|+++|+++++.|+|+|+|.|.++++ +.++.++..+......+.+....++|+|.|.|+
T Consensus 129 RLDkdTSGlll~AK~~~a~~~l~~~f~~r~v~K~Y~Alv~G~~~~~~~~i~~pi~r~~~~~~~~~v~~~~~gk~A~T~~~ 208 (289)
T COG0564 129 RLDKDTSGLLLVAKNREAARELSEQFKQRKVKKTYLALVRGHLPEDEGTIDAPIGRDPKNRKKMAVVKEGSGKPAITHYE 208 (289)
T ss_pred cCCCCCceEEEEECCHHHHHHHHHHHhcCcCcEEEEEEEECcccCCCCEEeeeeecCCcCCceEEEeccCCCCceEEEEE
Confidence 9999999999999999999999999999999999999999999875 899999999988877777766444899999999
Q ss_pred EeEEeeccCCc-EEEEEEEeCCCcccHHHHHHHHhCCceecCCCCCccc-ccccccccccccccccccccccCcccccc
Q psy8199 161 RLATGIINKKH-ISLIRCNLKTGRTHQIRVHMQWLGHGIVGDNLYGKKY-SKSLIFNRQALHAYKLGLIHPKNNLKLKW 237 (965)
Q Consensus 161 ~~~~~~~~~~~-~s~~~~~~~tGr~hQIR~~~~~~g~pi~gD~~~~~~~-~~~~~~~~~~Lha~~l~f~~p~~~~~~~~ 237 (965)
++.+. .. +|+++|+|.||||||||+||+++||||+||++||... .....+.+++||++.+.|.||.++....+
T Consensus 209 ~l~~~----~~~~tlv~~~~~TGRTHQIRVHl~~lghPI~GD~~Yg~~~~~~~~~~~r~~LHA~~l~f~hp~t~~~~~~ 283 (289)
T COG0564 209 VLERF----GDNYTLVELKPETGRTHQIRVHLAHLGHPIVGDPLYGGKDKSAGAGLKRQALHAYKLSFTHPLTGEELEF 283 (289)
T ss_pred ehhcc----CCceEEEEEEeCCCCHhHHHHHHHHCCCCeeCCcccCCchhhcccCcchhhhhhceeEccCCCCCCEEEE
Confidence 99885 44 6999999999999999999999999999999999752 22234688999999999999998876654
No 90
>PRK08444 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-44 Score=392.58 Aligned_cols=305 Identities=16% Similarity=0.198 Sum_probs=274.1
Q ss_pred cccccHHHHHHhcCCCchhHHHHHHHHHHHhcCCCeEEEe--EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHH
Q psy8199 643 QTFNELDEVINLFNLPFNDLLFRAQKVHRKYFDANEIELA--VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESV 720 (965)
Q Consensus 643 ~~~~~~~e~l~l~~~~~~~l~~~a~~~~~~~~~g~~~~~~--~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei 720 (965)
....+.+|++.|++.++.+|+..|+++|++++ |++++++ .+||+ ||.|.++|.||+|++..+.. ..|. +++|||
T Consensus 10 g~~ls~eeal~Ll~~dl~~L~~~A~~vR~~~~-G~~Vt~~~n~~In~-TN~C~~~C~FCaf~~~~~~~-~~y~-ls~eeI 85 (353)
T PRK08444 10 NERLNQEEAVKLYDLDLFTLGKYADKKRTKLH-GKKVYFNVNRHINP-TNICADVCKFCAFSAHRKNP-NPYT-MSHEEI 85 (353)
T ss_pred CCCCCHHHHHHHhhcCHHHHHHHHHHHHHHhc-CCEEEEEecCCccc-ccccccCCccCCCccCCCCC-cccc-CCHHHH
Confidence 35688999999998888999999999988887 8988776 78999 99999999999999865443 4565 899999
Q ss_pred HHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--CcEeEE-----------ecCCCCHHHHHHHHHhCCC
Q psy8199 721 ITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCL-----------TLGMLNENQAYRLKKVGLD 787 (965)
Q Consensus 721 ~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~--~~~i~~-----------~~~~~~~e~l~~Lk~aG~~ 787 (965)
++.++++.+.|+++|+|++|.++. .++++++++++.||+. ++.++. +.|...+|.+++||+||++
T Consensus 86 ~~~a~~a~~~G~~ei~iv~G~~p~--~~~e~y~e~ir~Ik~~~p~i~i~a~s~~Ei~~~a~~~g~~~~e~l~~LkeAGl~ 163 (353)
T PRK08444 86 LEIVKNSVKRGIKEVHIVSAHNPN--YGYEWYLEIFKKIKEAYPNLHVKAMTAAEVDFLSRKFGKSYEEVLEDMLEYGVD 163 (353)
T ss_pred HHHHHHHHHCCCCEEEEeccCCCC--CCHHHHHHHHHHHHHHCCCceEeeCCHHHHHHHHHHcCCCHHHHHHHHHHhCcc
Confidence 999999999999999999998763 4789999999999974 577776 7889999999999999999
Q ss_pred eEec-cCCC-CHHHHhcccCCCC-HHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeecccc
Q psy8199 788 YYNH-NLDT-SPKLYGDIISTRD-YENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLV 864 (965)
Q Consensus 788 ~i~i-~~es-~~~~~~~i~~~~~-~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~ 864 (965)
++.. +.|. ++++++.|+++|. .++|++.++.+|++|+++++++|||+|||++|+++++..|++++ .++++++.|+
T Consensus 164 ~~~g~~aEi~~~~vr~~I~p~k~~~~~~~~i~~~a~~~Gi~~~sg~l~G~gEt~edrv~hl~~Lr~Lq--~~t~gf~~fI 241 (353)
T PRK08444 164 SMPGGGAEIFDEEVRKKICKGKVSSERWLEIHKYWHKKGKMSNATMLFGHIENREHRIDHMLRLRDLQ--DKTGGFNAFI 241 (353)
T ss_pred cCCCCCchhcCHHHHhhhCCCCCCHHHHHHHHHHHHHcCCCccceeEEecCCCHHHHHHHHHHHHHhc--cccCCceEEE
Confidence 9999 5899 9999999999775 58899999999999999999999999999999999999999999 8999999999
Q ss_pred cc----CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccE---EeeCCccccCCC---
Q psy8199 865 QI----KGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANS---IFYGDKLLTTDN--- 934 (965)
Q Consensus 865 P~----~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~---~~~g~~~~t~~~--- 934 (965)
|. +||||++.+++++.+++|++|++|+++|++ .+|+++|..++.+.++.+|.+|||+ ++.++++....|
T Consensus 242 p~~f~~~~t~l~~~~~~~~~e~Lr~iAi~Rl~L~~i-~ni~a~w~~~g~~~~q~~L~~Ga~D~ggt~~~e~i~~~ag~~~ 320 (353)
T PRK08444 242 PLVYQRENNYLKVEKFPSSQEILKTIAISRILLDNI-PHIKAYWATLTLNLALVAQEFGANDLDGTIEKESIQSAAGAKS 320 (353)
T ss_pred ecccCCCCCcCCCCCCCCHHHHHHHHHHHHHhcCCC-CccccccccCcHHHHHHHHhcCCccCccccccccchhhccCCC
Confidence 99 999999888899999999999999999985 6899999999999999999999995 456677665444
Q ss_pred ---CCChhhHHHHHHcCCCcchhhh
Q psy8199 935 ---TKTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 935 ---~~~~~~~~~~~~~g~~~~~~~~ 956 (965)
.+.++..++++++|++|++|+.
T Consensus 321 ~~~~~~~~l~~~i~~~g~~p~~R~t 345 (353)
T PRK08444 321 ANGLSLEDFIFLIKDSGFIPVERDS 345 (353)
T ss_pred CCCCCHHHHHHHHHHcCCCeeeecC
Confidence 3678999999999999999975
No 91
>PRK08508 biotin synthase; Provisional
Probab=100.00 E-value=8.6e-44 Score=378.14 Aligned_cols=272 Identities=36% Similarity=0.588 Sum_probs=251.3
Q ss_pred CeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHH
Q psy8199 677 NEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMI 756 (965)
Q Consensus 677 ~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~ 756 (965)
|++.+|++++++|++|+++|.||+|++.++.....|+.+++|+|++.++++.+.|+++|++++++..+...+++++++++
T Consensus 2 ~~~~~~~i~~~~s~gC~~~C~FCa~~~~~~~~~~~y~~~s~eeI~~~a~~a~~~g~~~~~lv~sg~~~~~~~~e~~~ei~ 81 (279)
T PRK08508 2 KEIFLCAISNISSGNCKEDCKYCTQSAHYKADIKRYKRKDIEQIVQEAKMAKANGALGFCLVTSGRGLDDKKLEYVAEAA 81 (279)
T ss_pred CeEEEEEEeccccCCCCCCCcCCCCcccCCCCCccccCCCHHHHHHHHHHHHHCCCCEEEEEeccCCCCcccHHHHHHHH
Confidence 67999999999999999999999999866555567887899999999999999999999998766654566889999999
Q ss_pred HHHHhc--CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec
Q psy8199 757 CEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL 834 (965)
Q Consensus 757 ~~i~~~--~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl 834 (965)
+.+|+. ++.++.+.|.++++.+++||+||++++++++||+++.|+++++.++|++++++++.++++|+++++++|+|+
T Consensus 82 ~~ik~~~p~l~i~~s~G~~~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~sg~I~Gl 161 (279)
T PRK08508 82 KAVKKEVPGLHLIACNGTASVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCSGGIFGL 161 (279)
T ss_pred HHHHhhCCCcEEEecCCCCCHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecceeEEec
Confidence 999975 566777999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHH
Q psy8199 835 SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAF 914 (965)
Q Consensus 835 ~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~ 914 (965)
|||.||+++++..+++++ +++||++.|.|.+|||++. ++.+++++++++|++|+++|+..|+++++|+.+..+.+..
T Consensus 162 GEt~ed~~~~l~~lr~L~--~~svpl~~~~p~~~t~~~~-~~~~~~~~lr~iAv~Rl~lp~~~i~~~~gr~~~~~~~~~~ 238 (279)
T PRK08508 162 GESWEDRISFLKSLASLS--PHSTPINFFIPNPALPLKA-PTLSADEALEIVRLAKEALPNARLMVAGGREVVFGERQYE 238 (279)
T ss_pred CCCHHHHHHHHHHHHcCC--CCEEeeCCcCCCCCCCCCC-CCCCHHHHHHHHHHHHHHCCCceeeecCChhhhchhhHHH
Confidence 999999999999999999 8999999999999999975 5689999999999999999999999999998766778889
Q ss_pred HhhcCccEEeeCCccccCCCCCChhhHHHHHHcCCCcc
Q psy8199 915 CFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKLGINTR 952 (965)
Q Consensus 915 ~l~~Gan~~~~g~~~~t~~~~~~~~~~~~~~~~g~~~~ 952 (965)
++.+|||++++|++ +|+.|+++++|.+|++++|+.+.
T Consensus 239 ~~~~g~n~~~~g~~-lt~~g~~~~~d~~~~~~~~~~~~ 275 (279)
T PRK08508 239 IFEAGANAIVIGDY-LTTKGEAPKKDIEKLKSLGFEIA 275 (279)
T ss_pred HHhcCCcceeecCc-ccCCCCChHHHHHHHHHcCCCcC
Confidence 99999999999995 68888999999999999999876
No 92
>KOG1405|consensus
Probab=100.00 E-value=1.4e-44 Score=362.98 Aligned_cols=379 Identities=24% Similarity=0.356 Sum_probs=301.1
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHH-HHhh-c-cccccCCCCcHH-HHHHHHHHHhhcCCCCCeEEEcC
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKN-QLNK-L-EHVMLSNLTHKP-VIKLSEKLSSLTQYKLGHCFYGS 321 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~-~~~~-~-~~~~~~~~~~~~-~~~la~~l~~~~~~~~~~v~~~~ 321 (965)
.|++|+|||.+||.++.+.+.++||+||.+++++.. ++.. + .......++... .+.+.+.+....|.+.++|++.-
T Consensus 68 NYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~APKG~~~v~tm~ 147 (484)
T KOG1405|consen 68 NYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLVNRPALGNFPPKDFAEKLRQSLLSIAPKGQKQVITML 147 (484)
T ss_pred ceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHhccccccCCChhhHHHHHHHHHHhhCcchHHHHHHHh
Confidence 799999999999999999999999999999998764 3222 1 111222333333 34444456677888899999999
Q ss_pred ChhHHHHHHHHHHHHHHHhc--CC------------------CCceEEEEEcCCccCCccccccccCCcCccchhcccCC
Q psy8199 322 DGASAVEVALKMSFHYWYNK--GF------------------LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLN 381 (965)
Q Consensus 322 sGseA~~~Al~~a~~~~~~~--g~------------------~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~ 381 (965)
+||.|||.|+|.+.-|++.+ |. ++.-.|++|.++|||++.+.++.+.....+....|..
T Consensus 148 cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaF- 226 (484)
T KOG1405|consen 148 CGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAF- 226 (484)
T ss_pred ccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCccccccCCCCC-
Confidence 99999999999998876543 21 1245699999999999999999998776666544433
Q ss_pred CeeEecCCCCCCCCCCCChh--HHHHHHHHHHHHHHHhCC---CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy8199 382 KTYIITTPDSRNINKGNSAN--EIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 456 (965)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~le~~l~~~~---~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 456 (965)
++...++|.+..+.+....+ ..+..|++++|++|.++. ..+|+||+|| ||++||....+++|++.|+++|++||
T Consensus 227 dWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEP-IQsEGGDnhaSp~Ff~kLrdi~~Kh~ 305 (484)
T KOG1405|consen 227 DWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEP-IQSEGGDNHASPDFFRKLRDITKKHG 305 (484)
T ss_pred CCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeec-hhccCCCccCCHHHHHHHHHHHHhcC
Confidence 33344555443333211111 145678999999998763 5799999999 99999999999999999999999999
Q ss_pred CeEEEeccccCCCcccccccccccCC--Ccceeeecccc-CCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHH
Q psy8199 457 IHLIADEIAVGCGRTGKFFACEHAEI--WPDFLCLSKGI-TGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPL 533 (965)
Q Consensus 457 ~llI~DEv~tg~gr~G~~~~~~~~~~--~pDivt~sK~l-~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~ 533 (965)
+.+|+||||||.|-||++|+++++++ .||+|||||-+ +||| .-.+++ +. -.++.+..|+.|.|.
T Consensus 306 v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGf------fh~~~f----rp---n~pYrifNTWmGdP~ 372 (484)
T KOG1405|consen 306 VAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGF------FHDEEF----RP---NEPYRIFNTWMGDPS 372 (484)
T ss_pred eEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCcc------ccCccc----CC---CchHHHhhhhcCChH
Confidence 99999999999999999999999988 59999999966 5553 222222 21 234567789999999
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcc-cCCCc-eeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcC
Q psy8199 534 ACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE 611 (965)
Q Consensus 534 ~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~-i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~G 611 (965)
-+....++++.+.+++++++++..|+.|..+|.++ +++|+ +..+||+|.|+++++. + .+..+++...++-+|
T Consensus 373 k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~p--s----~~~Rdk~i~~~~~nG 446 (484)
T KOG1405|consen 373 KNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCP--S----GSIRDKLILIARLNG 446 (484)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCC--C----hHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999 77886 5699999999999986 2 345667888999999
Q ss_pred cEEeecC-CEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 612 LLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 612 i~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+-+..+| ..|||.|+++..+...+-+++++.+.+
T Consensus 447 v~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l 481 (484)
T KOG1405|consen 447 VNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKIL 481 (484)
T ss_pred ceecccccceeeeccceeehhhhHHHHHHHHHHHh
Confidence 9887665 689999999999999999988887654
No 93
>KOG2900|consensus
Probab=100.00 E-value=8.4e-45 Score=346.76 Aligned_cols=308 Identities=50% Similarity=0.873 Sum_probs=288.6
Q ss_pred cHHHHHHhcCCCchhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHH
Q psy8199 647 ELDEVINLFNLPFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQK 726 (965)
Q Consensus 647 ~~~e~l~l~~~~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~ 726 (965)
+.++..++|+.++.+|..+|+.++|+.+.+.+|+.|++++++|+||..+|+||+++..+..+.+.-+++..+++++++++
T Consensus 49 tr~eik~iYdtPLldL~f~aa~~HRk~Hdp~kVQqCTLlsIKtGGCsEDCkYCaQSSRy~TGvKA~klmk~DeVi~~Ak~ 128 (380)
T KOG2900|consen 49 TRSEIKEIYDTPLLDLTFAAALQHRKWHDPTKVQQCTLLSIKTGGCSEDCKYCAQSSRYDTGVKAEKLMKVDEVIKEAKE 128 (380)
T ss_pred cHHHHHHHhcchHHHHHHHHHHHHhhhCCccceeeeEEEEeecCCcccccchhhhhcccccchhHHHHhhHHHHHHHHHH
Confidence 45678888999999999999999999998899999999999999999999999999888888888888999999999999
Q ss_pred HHHCCCCEEEEeeccCCCCc--ccHHHHHHHHHHHHhcCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhccc
Q psy8199 727 AKSDGATRFCMGAAWRELKD--RDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDII 804 (965)
Q Consensus 727 ~~~~g~~~i~l~~g~~~~~~--~~~~~~~~~~~~i~~~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~ 804 (965)
+++.|-.+||+...+.+... ..+.+++|+++.++..++++|++.|.++++..+.||+||+..++++++|+.+.|.++-
T Consensus 129 AK~~GSTRFCmGaAWRD~~GRk~~fk~IlE~ikevr~MgmEvCvTLGMv~~qQAkeLKdAGLTAYNHNlDTSREyYskvI 208 (380)
T KOG2900|consen 129 AKRNGSTRFCMGAAWRDMKGRKSAFKRILEMIKEVRDMGMEVCVTLGMVDQQQAKELKDAGLTAYNHNLDTSREYYSKVI 208 (380)
T ss_pred HHhcCCceeecchhhhhhccchhHHHHHHHHHHHHHcCCceeeeeeccccHHHHHHHHhccceecccCccchhhhhcccc
Confidence 99999999999887764322 3478899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC--CCCCCHHHH
Q psy8199 805 STRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG--SSILDPLEF 882 (965)
Q Consensus 805 ~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~--~~~~~~~~~ 882 (965)
...+|++++++|+.++++||++|++-|+||||..+|++-.+..|..+..+|.++|++.++|.+|||+.+ ..+....++
T Consensus 209 tTRtYDdRL~Ti~nvr~aGikvCsGGIlGLGE~e~DriGlihtLatmp~HPESvPiN~LvaikGTP~~d~~~k~l~i~e~ 288 (380)
T KOG2900|consen 209 TTRTYDDRLQTIKNVREAGIKVCSGGILGLGESEDDRIGLIHTLATMPPHPESVPINRLVAIKGTPMADEKSKKLQIDEI 288 (380)
T ss_pred eecchHHHHHHHHHHHHhcceecccccccccccccceeeeeeeeccCCCCCcccccceEEecCCcccchhhcccccHHHH
Confidence 999999999999999999999999999999999999999999999998889999999999999999998 677889999
Q ss_pred HHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEeeCCccccCCCCCChhhHHHHHHcCCCcchh
Q psy8199 883 IRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKLGINTRNI 954 (965)
Q Consensus 883 ~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~~~~~g~~~~~~ 954 (965)
++.|+.+|+++|..+|+++++|..+...-+.+++.+|||++|.|++.+|+++-+-++|..|+..+|..|+..
T Consensus 289 lR~IaTARIvMPKaiiRlaAGR~t~sesEQalcFmAGaNsiFTGeKmLTTp~n~wD~D~~mf~~wGL~pm~~ 360 (380)
T KOG2900|consen 289 LRTIATARIVMPKAIIRLAAGRYTMSESEQALCFMAGANSIFTGEKMLTTPCNGWDEDKAMFAKWGLQPMEA 360 (380)
T ss_pred HHHHhhhheechHHHHHHhccccccchhHHHHHHHhCCccceechhhhcCCCCCcchHHHHHHHcCCCcCcc
Confidence 999999999999999999999998877778899999999999999999999989999999999999998654
No 94
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=9.2e-42 Score=387.23 Aligned_cols=359 Identities=34% Similarity=0.546 Sum_probs=295.5
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+++||.||++||||.+|+|+++|||+||.|.+++.+++++..+.. ..+.++...+++++++++++ .+++++++||++
T Consensus 19 ~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~g--~~~~~~~~sg~~ 95 (379)
T TIGR00707 19 AYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVS-NLYYTEPQEELAEKLVEHSG--ADRVFFCNSGAE 95 (379)
T ss_pred CEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccc-cccCCHHHHHHHHHHHhhCC--CCEEEEeCCcHH
Confidence 899999999999999999999999999999999999998864332 34578889999999999985 579999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|++.|+++++.+....| +++++|++++++|||++..+...++...+...+.+...+..+++.
T Consensus 96 a~~~a~~~~~~~~~~~~-~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 157 (379)
T TIGR00707 96 ANEAALKLARKYTGDKG-KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPY----------------- 157 (379)
T ss_pred HHHHHHHHHHHHhhccC-CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCC-----------------
Confidence 99999998877642222 236899999999999998888877654433222333333333332
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
+|++++++.+. +++++|++|| +++++|...++.+++++|.++|++||+++|+||+|+|||+.|.++++...++.||
T Consensus 158 ~d~~~l~~~~~---~~~~~v~~~p-~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d 233 (379)
T TIGR00707 158 NDIESLKKAID---DETAAVIVEP-IQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPD 233 (379)
T ss_pred CCHHHHHHHhh---hCeeEEEEEc-cccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCC
Confidence 46888888885 3578899999 8888888778999999999999999999999999999999887666667788999
Q ss_pred eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
++||||++++| +|+|++++++++++.+.. ..++.+|++|+++++++.++|+.++.+++.+++++++++++++|
T Consensus 234 ~~t~sK~~~~G-~riG~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l 306 (379)
T TIGR00707 234 IITLAKGLGGG-VPIGATLAKEEVAEAFTP------GDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERL 306 (379)
T ss_pred EEEEcccccCC-cccEEEEEcHHHHhhhcC------CCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 99999999977 899999999999988864 23567888999999999999998877778899999999999999
Q ss_pred HcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 566 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 566 ~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
+++.....+..+++.|.++.+.+. .+ ...+.+.|.++||++.|.+ +.+|++|++.+++++++++++++.+.
T Consensus 307 ~~~~~~~~~~~~~~~g~~~~~~~~-~~-------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 307 EELGKNYPNKEVRGKGLMLGIELE-AP-------CKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred HHHHhhCCCCccccCceEEEEEec-Cc-------HHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 876221223456678898888774 11 3467888999999999876 79999999999999999999988653
No 95
>PRK05926 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=371.79 Aligned_cols=318 Identities=14% Similarity=0.134 Sum_probs=270.1
Q ss_pred HHHHHHHHhhhc-ccccHHHHHHhcC----CCchhHHHHHHHHHHHhcCCCeEEEeEeEee-ccCCCCCCCCCCCCCCcC
Q psy8199 632 NEIQHMTSAIFQ-TFNELDEVINLFN----LPFNDLLFRAQKVHRKYFDANEIELAVLLSI-KTGGCTEDCGYCPQSTHY 705 (965)
Q Consensus 632 ~~i~~~~~~l~~-~~~~~~e~l~l~~----~~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~-~s~~C~~~C~fC~~~~~~ 705 (965)
..+..+.+++.. ...+.+|++.||+ .++.+|+..|+++|++++ |+.++++.++++ .||.|+.+|.||+|++.
T Consensus 13 ~~~~~~~~kv~~g~~ls~eeal~Ll~~~~~~~l~~L~~~A~~iR~~~~-G~~V~~~~~~nin~Tn~C~~dC~FCaf~~~- 90 (370)
T PRK05926 13 SWLKTLFDDYLSGARLSEEDALQLLLLTDAEDQRALWSFADLIRANRV-GDTVYYSSTLYLYPTNFCQFNCTFCSFYAK- 90 (370)
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHhCCCchHHHHHHHHHHHHHHHhc-CCeEEEEEeeeeecCCCCCCCCCccccccC-
Confidence 345667777654 5688899999983 346789999999988877 999999988765 69999999999998864
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--CcEeEEec-----------CC
Q psy8199 706 NTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTL-----------GM 772 (965)
Q Consensus 706 ~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~--~~~i~~~~-----------~~ 772 (965)
.....++.+++|||++.++++ +.|+++|+|++|.++ ..+++++.++++.|++. ++.++... +.
T Consensus 91 -~~~~~~~~ls~eeI~~~a~~a-~~G~~ei~iv~G~~p--~~~~e~~~e~i~~Ik~~~p~i~i~a~s~~Ei~~~~~~~~~ 166 (370)
T PRK05926 91 -PGDPKGWFYTPDQLVQSIKEN-PSPITETHIVAGCFP--SCNLAYYEELFSKIKQNFPDLHIKALTAIEYAYLSKLDNL 166 (370)
T ss_pred -CCCcccccCCHHHHHHHHHHH-hcCCCEEEEEeCcCC--CCCHHHHHHHHHHHHHhCCCeeEEECCHHHHHHHHhhcCC
Confidence 233455669999999999998 689999999998765 46899999999999985 45555432 44
Q ss_pred CCHHHHHHHHHhCCCeEecc-CCC-CHHHHhcccCC-CCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHH
Q psy8199 773 LNENQAYRLKKVGLDYYNHN-LDT-SPKLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLA 849 (965)
Q Consensus 773 ~~~e~l~~Lk~aG~~~i~i~-~es-~~~~~~~i~~~-~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~ 849 (965)
.+++.+++||+||++++.++ .|+ +++..+.++++ .++++|+++++.+|++|+++++++|+|+|||++|+++++..|+
T Consensus 167 ~~~e~l~~LkeAGl~~~~g~GaEi~~e~~r~~~~p~~~t~~e~l~~i~~a~~~Gi~~~sgmi~G~gEt~edrv~~l~~Lr 246 (370)
T PRK05926 167 PVKEVLQTLKIAGLDSIPGGGAEILVDEIRETLAPGRLSSQGFLEIHKTAHSLGIPSNATMLCYHRETPEDIVTHMSKLR 246 (370)
T ss_pred CHHHHHHHHHHcCcCccCCCCchhcCHHHHHhhCCCCCCHHHHHHHHHHHHHcCCcccCceEEeCCCCHHHHHHHHHHHH
Confidence 67899999999999999985 999 89999999874 4789999999999999999999999999999999999999999
Q ss_pred hcCCCCCceeeccccc----cCCCCCCC----CCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCcc
Q psy8199 850 NLNPYPESVPINNLVQ----IKGTPLYG----SSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGAN 921 (965)
Q Consensus 850 ~l~~~~~~i~~~~~~P----~~gT~l~~----~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan 921 (965)
+++ .+++++..|+| +++||+.. .+..+..+.+|++|++|++||+. .+++++|..+|.+..+.+|.+|||
T Consensus 247 ~Lq--~~t~gf~~fIp~~f~~~~t~l~~~~~~~~~~~~~~~lr~~AvaRl~l~n~-~~iqa~w~~~G~~~~q~~L~~Gan 323 (370)
T PRK05926 247 ALQ--DKTSGFKNFILLKFASENNALGKRLRKMGSRHSIPPASIIAVARLFLDNF-PNIKALWNYLGIEVALHLLSCGAN 323 (370)
T ss_pred hcC--CccCCeeeeEecccCCCCCcccccccccCCCChHHHHHHHHHHHHhcCCC-cccccCchhcCHHHHHHHHhCCCc
Confidence 999 89999999998 78999864 33578899999999999999986 999999999999999999999999
Q ss_pred E---EeeCCccccCCC------CCChhhHHHHHHcCCCcchhhhHH
Q psy8199 922 S---IFYGDKLLTTDN------TKTNDDSKLLKKLGINTRNIKIKM 958 (965)
Q Consensus 922 ~---~~~g~~~~t~~~------~~~~~~~~~~~~~g~~~~~~~~~~ 958 (965)
+ ++.++++.+..| .++++..++|+++|++|++|+...
T Consensus 324 D~ggt~~~e~i~~~ag~~~~~~~~~~~~~~~i~~~g~~p~~rd~~~ 369 (370)
T PRK05926 324 DLSSTHQGEKVFQMASSQEPIKMDIEGMAHLITQQGRIPCLTNSKT 369 (370)
T ss_pred cCccccccchhhhccCCCCCCCCCHHHHHHHHHHcCCCceecCCCC
Confidence 6 445666654444 256889999999999999998653
No 96
>TIGR00433 bioB biotin synthetase. Catalyzes the last step of the biotin biosynthesis pathway.
Probab=100.00 E-value=1.5e-40 Score=361.96 Aligned_cols=292 Identities=50% Similarity=0.876 Sum_probs=254.8
Q ss_pred cCCCchhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCE
Q psy8199 655 FNLPFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATR 734 (965)
Q Consensus 655 ~~~~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~ 734 (965)
++.++.+++..|+++++++++|+.+.++++++++|++|+++|.||+++..+......++.+++++++++++++.+.|+++
T Consensus 2 ~~~~~~~l~~~a~~~~~~~~~~~~v~~~~~~~i~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~ 81 (296)
T TIGR00433 2 FETPLLDLLYEAFQIHRKHFDPRKVQLCTIMNIKSGGCPEDCKYCSQSSRSKTGLPIERLKKVDEVLEEARKAKAAGATR 81 (296)
T ss_pred ccCcHHHHHHHHHHHHHHhcCCCEEEEEEEEecccCCCCCCCcCCCCcccCCCCCccccCCCHHHHHHHHHHHHHCCCCE
Confidence 44478899999999999988899999999999889999999999999875433334566789999999999999999999
Q ss_pred EEEeeccCCCCccc-HHHHHHHHHHHHhcCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhcccCCCCHHHHH
Q psy8199 735 FCMGAAWRELKDRD-LDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRL 813 (965)
Q Consensus 735 i~l~~g~~~~~~~~-~~~~~~~~~~i~~~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~~~~~~~~~ 813 (965)
+++++++..+.... .+++.++.+.+++.++.++++.|.+++|.++.||+||++.+.+++|+++++++++++++++++++
T Consensus 82 ~~l~~~g~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~g~~~~e~l~~Lk~aG~~~v~i~~E~~~~~~~~i~~~~s~~~~~ 161 (296)
T TIGR00433 82 FCLVASGRGPKDREFMEYVEAMVQIVEEMGLKTCATLGLLDPEQAKRLKDAGLDYYNHNLDTSQEFYSNIISTHTYDDRV 161 (296)
T ss_pred EEEEEecCCCChHHHHHHHHHHHHHHHhCCCeEEecCCCCCHHHHHHHHHcCCCEEEEcccCCHHHHhhccCCCCHHHHH
Confidence 98876544333333 44455555555567888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q psy8199 814 NTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITM 893 (965)
Q Consensus 814 ~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~l 893 (965)
++++.++++|+++++++|+|++||.+++.++++++++++ ++.+++++++|.|||++++.++++.++++++++.+|+++
T Consensus 162 ~ai~~l~~~Gi~v~~~~i~Gl~et~~d~~~~~~~l~~l~--~~~i~l~~l~p~~gT~l~~~~~~s~~~~~~~ia~~r~~l 239 (296)
T TIGR00433 162 DTLENAKKAGLKVCSGGIFGLGETVEDRIGLALALANLP--PESVPINFLVKIKGTPLADNKELSADDALKTIALARIIM 239 (296)
T ss_pred HHHHHHHHcCCEEEEeEEEeCCCCHHHHHHHHHHHHhCC--CCEEEeeeeEEcCCCccCCCCCCCHHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999999999 999999999999999999998999999999999999999
Q ss_pred CCCceecccccc-ccchhhHHHHhhcCccEEeeCCccccCCCCCCh-hhHHHHHHcCC
Q psy8199 894 PTSRIRMSAGRK-EMGETTQAFCFLAGANSIFYGDKLLTTDNTKTN-DDSKLLKKLGI 949 (965)
Q Consensus 894 p~~~i~i~~~~~-~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~-~~~~~~~~~g~ 949 (965)
|+..|++.+++. .++...++.++.+|||++++|++ +|+.|.+.. +|..|++++|+
T Consensus 240 p~~~i~~~~~~~~~~~~~~~~~~l~~G~n~i~~g~~-~~~~g~~~~~~~~~~~~~~~~ 296 (296)
T TIGR00433 240 PKAEIRLAGGREVNMRELQQAMCFMAGANSIFVGDY-LTTTGNPEEDKDKKLLAKLGL 296 (296)
T ss_pred CcceEEEeCCcchhhhhhHHHHHHHhcCceEEEcCc-ccCCCCCCcHHHHHHHHHcCC
Confidence 999899888886 44444444599999999999995 577777777 99999999986
No 97
>PRK09240 thiH thiamine biosynthesis protein ThiH; Reviewed
Probab=100.00 E-value=4.6e-41 Score=371.28 Aligned_cols=316 Identities=21% Similarity=0.280 Sum_probs=274.9
Q ss_pred ccCHHHHHHHHHhhhcccccHHHHHHhcCC----CchhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCC
Q psy8199 628 ILNKNEIQHMTSAIFQTFNELDEVINLFNL----PFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQST 703 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~~~~~~~e~l~l~~~----~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~ 703 (965)
..++++++++++ ....+.+|++.||+. ++.+|+.+|+++|+++| |+++.++.++++ ||.|+++|.||+|+.
T Consensus 21 ~~~~~~~~~il~---g~~ls~ee~~~Ll~~~~~~~l~~L~~~A~~ir~~~~-G~~v~l~~~in~-Tn~C~~~C~YC~f~~ 95 (371)
T PRK09240 21 SKTAADVERALN---KDRLSLEDLMALLSPAAEPYLEEMAQKAQRLTRQRF-GNTISLYTPLYL-SNYCANDCTYCGFSM 95 (371)
T ss_pred cCCHHHHHHHHh---cCCCCHHHHHHHhCCCChhHHHHHHHHHHHHHHHHc-CCEEEEEeceEE-cccccCcCCcCCCCC
Confidence 456777777664 356888999999974 35678899999988888 899999999999 999999999999987
Q ss_pred cCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcEeEEecCCCCHHHHHHHHH
Q psy8199 704 HYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKK 783 (965)
Q Consensus 704 ~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~e~l~~Lk~ 783 (965)
.++. .+ +.+++|||+++++.+.+.|+++|+|++|..+ ...++++++++++.+++....++++.+.++.+.++.||+
T Consensus 96 ~~~~--~~-~~ls~eEI~~~a~~~~~~Gv~~i~lvgGe~p-~~~~~e~l~~~i~~Ik~~~p~i~i~~g~lt~e~l~~Lk~ 171 (371)
T PRK09240 96 SNKI--KR-KTLDEEEIEREMAAIKKLGFEHILLLTGEHE-AKVGVDYIRRALPIAREYFSSVSIEVQPLSEEEYAELVE 171 (371)
T ss_pred CCCC--cc-ccCCHHHHHHHHHHHHhCCCCEEEEeeCCCC-CCCCHHHHHHHHHHHHHhCCCceeccCCCCHHHHHHHHH
Confidence 5432 23 5699999999999999999999999997644 457899999999999986666777889999999999999
Q ss_pred hCCCeEeccCCC-CHHHHhcccC---CCCHHHHHHHHHHHHHcCCc-eeeeEEEecCCCHHHHHHHHHHHHhcCC----C
Q psy8199 784 VGLDYYNHNLDT-SPKLYGDIIS---TRDYENRLNTLKNVRNVGIN-ICCGGIIGLSESRDQRAELIFQLANLNP----Y 854 (965)
Q Consensus 784 aG~~~i~i~~es-~~~~~~~i~~---~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl~et~ed~~~~l~~l~~l~~----~ 854 (965)
||++++++++|| +++.|+++++ +|++++++++++.++++|+. +++++|+|+||+.+|+++++.++++|+. .
T Consensus 172 aGv~r~~i~lET~~~~~~~~i~~~g~~h~~~~rl~~i~~a~~aG~~~v~~g~i~Glge~~~d~~~~a~~l~~L~~~~~~~ 251 (371)
T PRK09240 172 LGLDGVTVYQETYNPATYAKHHLRGPKRDFEYRLETPERAGRAGIRKIGLGALLGLSDWRTDALMTALHLRYLQRKYWQA 251 (371)
T ss_pred cCCCEEEEEEecCCHHHHHHhCcCCCCCCHHHHHHHHHHHHHcCCCeeceEEEecCCccHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999 8999999984 78999999999999999996 9999999999999999999999999983 1
Q ss_pred CCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchh----hHHHHhhcCccEEeeCCccc
Q psy8199 855 PESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGET----TQAFCFLAGANSIFYGDKLL 930 (965)
Q Consensus 855 ~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~----~~~~~l~~Gan~~~~g~~~~ 930 (965)
...|+++.|+|.+| |++..+++++.+++++++++|+++|+..|+++++|+....+ ++...+.+| |++++|++.
T Consensus 252 ~~sv~~~~l~P~~g-~~~~~~~~~~~e~l~~ia~~Rl~lP~~~i~~s~g~~~~lrd~~~~~~~~~~~ag-~~~~~G~y~- 328 (371)
T PRK09240 252 EYSISFPRLRPCTG-GIEPASIVSDKQLVQLICAFRLFLPDVEISLSTRESPEFRDNLIPLGITKMSAG-SSTQPGGYA- 328 (371)
T ss_pred ceeeecCccccCCC-CCCCCCCCCHHHHHHHHHHHHHHCcccccEEecCCCHHHHHHHHhhcceeeccC-ccCCCCCcC-
Confidence 24799999999999 99999999999999999999999999999999999655454 334566775 999999965
Q ss_pred cC----------CCCCChhhHHHHHHcCCCcchhh
Q psy8199 931 TT----------DNTKTNDDSKLLKKLGINTRNIK 955 (965)
Q Consensus 931 t~----------~~~~~~~~~~~~~~~g~~~~~~~ 955 (965)
|+ +|++++++++||+++|+.|...+
T Consensus 329 ~~~~~~~qf~~~~~r~~~~~~~~i~~~g~~~~~~~ 363 (371)
T PRK09240 329 DDHKELEQFEISDDRSVEEVAAALRAKGLQPVWKD 363 (371)
T ss_pred CCCCCcCCccCCCCCCHHHHHHHHHHCCCeeccch
Confidence 54 68899999999999999996544
No 98
>PRK07360 FO synthase subunit 2; Reviewed
Probab=100.00 E-value=5.4e-41 Score=371.26 Aligned_cols=321 Identities=16% Similarity=0.265 Sum_probs=271.8
Q ss_pred cCHHHHHHHHHhhhc-ccccHHHHHHhcCC-C---chhHHHHHHHHHHHhcCCCeEEE--eEeEeeccCCCCCCCCCCCC
Q psy8199 629 LNKNEIQHMTSAIFQ-TFNELDEVINLFNL-P---FNDLLFRAQKVHRKYFDANEIEL--AVLLSIKTGGCTEDCGYCPQ 701 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~-~~~~~~e~l~l~~~-~---~~~l~~~a~~~~~~~~~g~~~~~--~~~i~~~s~~C~~~C~fC~~ 701 (965)
+++.++..+++++.. ...+.++++.||+. + +.+|+.+|+++|++++ |+++++ +..+++ ||.|+.+|.||+|
T Consensus 2 ~~~~~~~~~~~~~~~g~~ls~~e~~~Ll~~~~~~~l~~L~~~A~~ir~~~~-G~~v~~~~~~~i~~-Tn~C~~~C~fC~~ 79 (371)
T PRK07360 2 MTDQIFEDILERARKGKDLSKEDALELLETTEPRRIFEILELADRLRKEQV-GDTVTYVVNRNINF-TNICEGHCGFCAF 79 (371)
T ss_pred cchHHHHHHHHHHhcCCCCCHHHHHHHhcCCChHHHHHHHHHHHHHHHHhc-CCeEEEEeccCccc-chhhhcCCccCCc
Confidence 455667888888765 57788999999855 3 6778999999988877 888876 457888 9999999999999
Q ss_pred CCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--CcEeEE-----------
Q psy8199 702 STHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCL----------- 768 (965)
Q Consensus 702 ~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~--~~~i~~----------- 768 (965)
++. .....+|. +++|||++.++++.+.|+++++|++|.++ ...+.++++++++.+|+. ++.++.
T Consensus 80 ~~~-~~~~~~y~-ls~eeI~~~a~~a~~~G~~~i~l~~G~~p-~~~~~e~~~~~i~~ik~~~~~i~i~a~s~~ei~~~~~ 156 (371)
T PRK07360 80 RRD-EGDHGAFW-LTIAEILEKAAEAVKRGATEVCIQGGLHP-AADSLEFYLEILEAIKEEFPDIHLHAFSPMEVYFAAR 156 (371)
T ss_pred ccC-CCCCCCee-CCHHHHHHHHHHHHhCCCCEEEEccCCCC-CCCcHHHHHHHHHHHHHhCCCcceeeCCHHHHHHHHh
Confidence 986 33455666 99999999999999999999999988655 233589999999999974 456654
Q ss_pred ecCCCCHHHHHHHHHhCCCeEe-ccCCC-CHHHHhcccCCC-CHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHH
Q psy8199 769 TLGMLNENQAYRLKKVGLDYYN-HNLDT-SPKLYGDIISTR-DYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELI 845 (965)
Q Consensus 769 ~~~~~~~e~l~~Lk~aG~~~i~-i~~es-~~~~~~~i~~~~-~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l 845 (965)
+.|..+++.+++||+||++++. -+.|. ++++++.+++++ +.++|+++++.++++|+++++++|+|+|||.+|+++++
T Consensus 157 ~~G~~~~e~l~~LkeAGld~~~~t~~e~l~~~vr~~i~p~~~s~~~~l~~i~~a~~~Gl~~~sg~i~G~gEt~edrv~~l 236 (371)
T PRK07360 157 EDGLSYEEVLKALKDAGLDSMPGTAAEILVDEVRRIICPEKIKTAEWIEIVKTAHKLGLPTTSTMMYGHVETPEHRIDHL 236 (371)
T ss_pred hcCCCHHHHHHHHHHcCCCcCCCcchhhccHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCceeeEEeeCCCCHHHHHHHH
Confidence 5689999999999999999996 23455 677888888865 89999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCceeecccccc----CCCCCCCCC----CCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhh
Q psy8199 846 FQLANLNPYPESVPINNLVQI----KGTPLYGSS----ILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFL 917 (965)
Q Consensus 846 ~~l~~l~~~~~~i~~~~~~P~----~gT~l~~~~----~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~ 917 (965)
..+++++ ++...+..|+|. +|||+++.. +.++.+.+|++|++|+++|+..++++++|..++...++.+|.
T Consensus 237 ~~lr~l~--~~~~g~~~fIp~~f~~~~Tpl~~~~~~~~~~~~~~~lr~iAi~Rl~lp~~~~~i~a~~~~lg~~~~~~~l~ 314 (371)
T PRK07360 237 LILREIQ--QETGGITEFVPLPFVHENAPLYERGRVKGGAPGLEDLLLYAVSRIFLGNWIKNIQASWVKLGLKLAQVALN 314 (371)
T ss_pred HHHHHhc--hhhCCeeEEEeccccCCCCccccccccCCCCCHHHHHHHHHHHHHhcCCCCCCeeccceeeCHHHHHHHHh
Confidence 9999999 788888888874 599998653 357888899999999999997789999998888887888999
Q ss_pred cCccEE---eeCCccccCCC------CCChhhHHHHHHcCCCcchhhh
Q psy8199 918 AGANSI---FYGDKLLTTDN------TKTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 918 ~Gan~~---~~g~~~~t~~~------~~~~~~~~~~~~~g~~~~~~~~ 956 (965)
+|||++ +.++++.+..| .+.+++.+|++++|+.|..|+-
T Consensus 315 ~Gan~~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~i~~~G~~~~~r~~ 362 (371)
T PRK07360 315 CGANDLGGTLMEEHITKMAGASGGTYMSVEELQWMIKSIGRIPKQRDT 362 (371)
T ss_pred cCCccCcCcCcccceecccCCCCCCCCCHHHHHHHHHHcCCceeeecC
Confidence 999998 89998866444 4788999999999999988875
No 99
>TIGR03700 mena_SCO4494 putative menaquinone biosynthesis protein, SCO4494 family. Members of this protein family appear to be involved in menaquinone biosynthesis by an alternate pathway via futalosine, based on close phylogenetic correlation with known markers of the futalosine pathway, gene clustering in many organisms, and paralogy with the SCO4550 protein.
Probab=100.00 E-value=6.1e-41 Score=369.03 Aligned_cols=305 Identities=16% Similarity=0.218 Sum_probs=264.1
Q ss_pred cccccHHHHHHhcC-CCchhHHHHHHHHHHHhcCCCeEEEe--EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHH
Q psy8199 643 QTFNELDEVINLFN-LPFNDLLFRAQKVHRKYFDANEIELA--VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIES 719 (965)
Q Consensus 643 ~~~~~~~e~l~l~~-~~~~~l~~~a~~~~~~~~~g~~~~~~--~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~ee 719 (965)
....+.++++.||+ .++.+|+..|+++|++.+ |++++++ .+|++ ||+|+++|.||+|++..+. ...|+ +++||
T Consensus 8 ~~~ls~~e~~~L~~~~~~~~L~~~A~~vr~~~~-g~~v~~~~~~~in~-Tn~C~~~C~FCa~~~~~~~-~~~y~-l~~ee 83 (351)
T TIGR03700 8 GQRLSFEDGLFLYASDDLLTLGELAALVRERKH-GDKVYFNVNRHLNY-TNICVNGCAFCAFQRERGE-PGAYA-MSLEE 83 (351)
T ss_pred CCCCCHHHHHHHcCCCcHHHHHHHHHHHHHHhc-CCeEEEeccCCccc-ccccccCCccCceeCCCCC-cccCC-CCHHH
Confidence 35678889999984 467889999999988877 8888777 78997 9999999999999875443 24566 89999
Q ss_pred HHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcC--cEeEE-----------ecCCCCHHHHHHHHHhCC
Q psy8199 720 VITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIG--LETCL-----------TLGMLNENQAYRLKKVGL 786 (965)
Q Consensus 720 i~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~--~~i~~-----------~~~~~~~e~l~~Lk~aG~ 786 (965)
|++.++++.+.|++++++++|.++ ..+.++++++++.||+.. +.++. +.|..+++.+++||+||+
T Consensus 84 I~~~a~~~~~~G~~~v~l~~G~~p--~~~~~~~~e~i~~Ik~~~p~i~i~~~~~~ei~~~~~~~g~~~~e~l~~LkeAGl 161 (351)
T TIGR03700 84 IVARVKEAYAPGATEVHIVGGLHP--NLPFEWYLDMIRTLKEAYPDLHVKAFTAVEIHHFSKISGLPTEEVLDELKEAGL 161 (351)
T ss_pred HHHHHHHHHHCCCcEEEEecCCCC--CCCHHHHHHHHHHHHHHCCCceEEeCCHHHHHHHHHHcCCCHHHHHHHHHHcCC
Confidence 999999999999999999988665 456899999999999854 55543 357788999999999999
Q ss_pred CeEec-cCCC-CHHHHhcccCCC-CHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccc
Q psy8199 787 DYYNH-NLDT-SPKLYGDIISTR-DYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNL 863 (965)
Q Consensus 787 ~~i~i-~~es-~~~~~~~i~~~~-~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~ 863 (965)
+++.. ++|+ ++++++++++++ ++++|+++++.++++|+++++++|+|+|||++|+++++..+++++ ....+++.|
T Consensus 162 d~~~~~g~E~~~~~v~~~i~~~~~~~~~~l~~i~~a~~~Gi~~~sg~i~GlgEt~edrv~~l~~Lr~l~--~~~~~f~~f 239 (351)
T TIGR03700 162 DSMPGGGAEIFAEEVRQQICPEKISAERWLEIHRTAHELGLKTNATMLYGHIETPAHRVDHMLRLRELQ--DETGGFQAF 239 (351)
T ss_pred CcCCCCcccccCHHHHhhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEeeCCCCHHHHHHHHHHHHHhh--HhhCCceEE
Confidence 99984 8999 999999999865 678999999999999999999999999999999999999999999 788888888
Q ss_pred ccc----CCCCCCCC--CCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccE---EeeCCccccCCC
Q psy8199 864 VQI----KGTPLYGS--SILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANS---IFYGDKLLTTDN 934 (965)
Q Consensus 864 ~P~----~gT~l~~~--~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~---~~~g~~~~t~~~ 934 (965)
+|. +||||++. +++++.+.++++|++|+++|+ ..+|+++|..++.+.++.+|.+|||+ ++.++++....|
T Consensus 240 iP~~f~~~~tpl~~~~~~~~~~~e~lr~iA~~Rl~l~~-i~~i~a~w~~~~~~~~~~~L~~Gand~ggt~~~e~v~~~~g 318 (351)
T TIGR03700 240 IPLAFQPDNNRLNRLLAKGPTGLDDLKTLAVSRLYLDN-IPHIKAYWVMLGLKLAQVALAFGVNDLDGTVVEEKIGHDAG 318 (351)
T ss_pred EeecccCCCCcccCCCCCCCCHHHHHHHHHHHHHhcCC-CCcccccccccCHHHHHHHHhcCCCCCCccCccceeecccc
Confidence 888 59999876 788999999999999999998 48999999999999999999999996 445555553333
Q ss_pred ------CCChhhHHHHHHcCCCcchhhh
Q psy8199 935 ------TKTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 935 ------~~~~~~~~~~~~~g~~~~~~~~ 956 (965)
.+.++...+++++|++|++|+.
T Consensus 319 ~~~~~~~~~~~l~~~i~~~g~~p~~r~~ 346 (351)
T TIGR03700 319 AKSPQALSKDELVRLIRDAGRVPVERDT 346 (351)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCeeeecC
Confidence 3578999999999999999874
No 100
>PRK08445 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=363.36 Aligned_cols=301 Identities=17% Similarity=0.242 Sum_probs=254.1
Q ss_pred ccHHHHHHhc-CCCchhHHHHHHHHHHHhcCCCeEEE---eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHH
Q psy8199 646 NELDEVINLF-NLPFNDLLFRAQKVHRKYFDANEIEL---AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVI 721 (965)
Q Consensus 646 ~~~~e~l~l~-~~~~~~l~~~a~~~~~~~~~g~~~~~---~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~ 721 (965)
.+.+|++.|| +.++.+|+..|+++|++++ |+.+.. +.++++ ||+|+++|.||+|++.++.. ..| .+++|+|+
T Consensus 4 ls~~e~l~Ll~~~~l~~L~~~A~~vr~~~~-g~~v~~~~~~~~in~-Tn~C~~~C~FCa~~~~~~~~-~~y-~l~~eeI~ 79 (348)
T PRK08445 4 LSKEEALDLIKNAPLKELGEMALERKQELH-PEKITTFIVDRNINY-TNICWVDCKFCAFYRHLKED-DAY-ILSFEEID 79 (348)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHHHHHHHHc-CCcEEEEeccccccc-ccccccCCccCCCccCCCCC-CCe-eCCHHHHH
Confidence 4667888888 4567899999999988888 565554 566999 99999999999999864443 556 48999999
Q ss_pred HHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcCc--EeEE----------ec-CCCCHHHHHHHHHhCCCe
Q psy8199 722 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGL--ETCL----------TL-GMLNENQAYRLKKVGLDY 788 (965)
Q Consensus 722 ~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~--~i~~----------~~-~~~~~e~l~~Lk~aG~~~ 788 (965)
+.++++.+.|++++++++|..+ ..+.+++.++++.|++..+ .++. +. +...+|.+++||+||+++
T Consensus 80 ~~~~~a~~~g~~~i~~~gg~~~--~~~~e~~~~l~~~Ik~~~p~i~~~a~s~~ei~~~a~~~~~~~~e~L~~LkeAGl~~ 157 (348)
T PRK08445 80 KKIEELLAIGGTQILFQGGVHP--KLKIEWYENLVSHIAQKYPTITIHGFSAVEIDYIAKISKISIKEVLERLQAKGLSS 157 (348)
T ss_pred HHHHHHHHcCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHCCCcEEEEccHHHHHHHHHHhCCCHHHHHHHHHHcCCCC
Confidence 9999999999999999887655 5679999999999998654 4322 21 233489999999999999
Q ss_pred Ee-ccCCC-CHHHHhcccC-CCCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCc-----eee
Q psy8199 789 YN-HNLDT-SPKLYGDIIS-TRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPES-----VPI 860 (965)
Q Consensus 789 i~-i~~es-~~~~~~~i~~-~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~-----i~~ 860 (965)
+. .++|+ ++++.+.+++ ..+.++|+++++.+|++||++++++|+|++||.+|+++++..+++++ .++ +++
T Consensus 158 ~~g~glE~~~d~v~~~~~pk~~t~~~~i~~i~~a~~~Gi~~~sg~i~G~~Et~edr~~~l~~lreLq--~~~~g~~~fi~ 235 (348)
T PRK08445 158 IPGAGAEILSDRVRDIIAPKKLDSDRWLEVHRQAHLIGMKSTATMMFGTVENDEEIIEHWERIRDLQ--DETGGFRAFIL 235 (348)
T ss_pred CCCCceeeCCHHHHHhhCCCCCCHHHHHHHHHHHHHcCCeeeeEEEecCCCCHHHHHHHHHHHHHHH--HHhCCeeEEec
Confidence 97 68999 9999999976 66899999999999999999999999999999999999999999999 554 444
Q ss_pred ccccccCCCCCCCC----CCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccE---EeeCCccccCC
Q psy8199 861 NNLVQIKGTPLYGS----SILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANS---IFYGDKLLTTD 933 (965)
Q Consensus 861 ~~~~P~~gT~l~~~----~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~---~~~g~~~~t~~ 933 (965)
+.|.| +|||++.. ++.++.+++|++|++|+++|+ .++|+++|..++..+++.+|.+|||+ ++.++++....
T Consensus 236 ~~~~p-~~tpl~~~~~~~~~~~~~e~Lr~iAv~Rl~l~~-~~~i~a~~~~~g~~~~~~~L~~Gand~~gt~~~e~i~~~a 313 (348)
T PRK08445 236 WSFQP-DNTPLKEEIPEIKKQSSNRYLRLLAVSRLFLDN-FKNIQSSWVTQGSYIGQLALLFGANDLGSTMMEENVVKAA 313 (348)
T ss_pred cccCC-CCCcccccCCCCCCCCHHHHHHHHHHHHHhCCC-CCCccCCCcccCHHHHHHHHhcCCccCccccccccchhcc
Confidence 44455 99999853 458999999999999999999 59999999988988899999999994 56677776554
Q ss_pred CC----CChhhHHHHHHcCCCcchhhh
Q psy8199 934 NT----KTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 934 ~~----~~~~~~~~~~~~g~~~~~~~~ 956 (965)
|. ++++...+|+++|+.|++|+.
T Consensus 314 g~~~~~~~~~~~~~i~~~g~~p~~r~t 340 (348)
T PRK08445 314 GASFRMNQAEMIELIKDIGEIPAKRNT 340 (348)
T ss_pred CCCCCCCHHHHHHHHHHcCCCeeeecC
Confidence 43 568999999999999999985
No 101
>TIGR03551 F420_cofH 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit. This enzyme, together with CofG, complete the biosynthesis of 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, the chromophore of coenzyme F420. The chromophore is also used in cyanobacteria DNA photolyases.
Probab=100.00 E-value=2.6e-40 Score=363.77 Aligned_cols=302 Identities=19% Similarity=0.294 Sum_probs=256.6
Q ss_pred cHHHHHHhcC--CCchhHHHHHHHHHHHhcCCCeEEE--eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHH
Q psy8199 647 ELDEVINLFN--LPFNDLLFRAQKVHRKYFDANEIEL--AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVIT 722 (965)
Q Consensus 647 ~~~e~l~l~~--~~~~~l~~~a~~~~~~~~~g~~~~~--~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~ 722 (965)
+.+|++.||+ .++.+|+.+|+++|++++ |+++++ +..+++ |++|+++|.||++++... ....|+ +|+|+|++
T Consensus 2 s~~e~~~ll~~~~~~~~L~~~A~~ir~~~~-g~~v~~~~~~~i~~-T~~C~~~C~FC~~~~~~~-~~~~y~-ls~eeI~e 77 (343)
T TIGR03551 2 TKEEALELFEARGNLFELFRLADELRRDIV-GDTVTYVVNRNINF-TNVCYGGCGFCAFRKRKG-DADAYL-LSLEEIAE 77 (343)
T ss_pred CHHHHHHHHhCCChHHHHHHHHHHHHHHhc-CCeEEEEeeecccc-ccccccCCccCCCccCCC-CCCccc-CCHHHHHH
Confidence 4578888885 467889999999987777 888876 456777 999999999999987532 234455 89999999
Q ss_pred HHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--CcEeEE-----------ecCCCCHHHHHHHHHhCCCeE
Q psy8199 723 AAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCL-----------TLGMLNENQAYRLKKVGLDYY 789 (965)
Q Consensus 723 ~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~--~~~i~~-----------~~~~~~~e~l~~Lk~aG~~~i 789 (965)
+++++.+.|+++|+|++|.++ ..+.++++++++.|++. ++.+++ +.|.++++.+++||+||++++
T Consensus 78 ~~~~~~~~G~~~i~l~gG~~p--~~~~~~~~~i~~~Ik~~~~~i~~~~~t~~ei~~~~~~~g~~~~e~l~~LkeAGl~~i 155 (343)
T TIGR03551 78 RAAEAWKAGATEVCIQGGIHP--DLDGDFYLDILRAVKEEVPGMHIHAFSPMEVYYGARNSGLSVEEALKRLKEAGLDSM 155 (343)
T ss_pred HHHHHHHCCCCEEEEEeCCCC--CCCHHHHHHHHHHHHHHCCCceEEecCHHHHHHHHHHcCCCHHHHHHHHHHhCcccc
Confidence 999999999999999988655 45689999999999985 455544 568899999999999999999
Q ss_pred e-ccCCC-CHHHHhcccCCC-CHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeecccccc
Q psy8199 790 N-HNLDT-SPKLYGDIISTR-DYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQI 866 (965)
Q Consensus 790 ~-i~~es-~~~~~~~i~~~~-~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~ 866 (965)
. .+.|+ ++++++++++++ ++++|+++++.++++|+++++++|+|+|||.+|+++++.++++++ ++...+..|+|.
T Consensus 156 ~~~~~E~~~~~v~~~i~~~~~~~~~~~~~i~~a~~~Gi~v~s~~i~G~~Et~ed~~~~l~~lr~l~--~~~~~~~~~iP~ 233 (343)
T TIGR03551 156 PGTAAEILDDEVRKVICPDKLSTAEWIEIIKTAHKLGIPTTATIMYGHVETPEHWVDHLLILREIQ--EETGGFTEFVPL 233 (343)
T ss_pred cCcchhhcCHHHHHhcCCCCCCHHHHHHHHHHHHHcCCcccceEEEecCCCHHHHHHHHHHHHHhh--HHhCCeeEEEec
Confidence 8 46788 899999999865 999999999999999999999999999999999999999999999 777777777775
Q ss_pred C----CCCCCCC----CCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccE---EeeCCccccCC--
Q psy8199 867 K----GTPLYGS----SILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANS---IFYGDKLLTTD-- 933 (965)
Q Consensus 867 ~----gT~l~~~----~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~---~~~g~~~~t~~-- 933 (965)
| |||++.. ++.++++++|++|++|+++|+..++++++|..++...++.+|.+|||+ +++.+++....
T Consensus 234 ~f~~~gT~l~~~~~~~~~~~~~~~lr~iAv~Rl~lp~~~~~i~a~~~~l~~~~~~~~l~~Gan~~~g~~~~e~v~~~~g~ 313 (343)
T TIGR03551 234 PFVHYNAPLYLKGMARPGPTGREDLKVHAIARILLHGLIDNIQASWVKLGKKLAQVALRCGANDLGGTLMEESISRAAGA 313 (343)
T ss_pred cccCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCcccCeeccccccCHHHHHHHHhCCCccCCccceecccccccCC
Confidence 5 9999743 557999999999999999999888999999888888789999999995 44555555333
Q ss_pred ----CCCChhhHHHHHHcCCCcchhhh
Q psy8199 934 ----NTKTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 934 ----~~~~~~~~~~~~~~g~~~~~~~~ 956 (965)
..++++...+++++|++|++|+.
T Consensus 314 ~~~~~~~~~~~~~~i~~~g~~~~~r~~ 340 (343)
T TIGR03551 314 SHGEYLSPEELEAIIEDAGRIPKQRTT 340 (343)
T ss_pred CCCCCCCHHHHHHHHHHcCCCeeecCC
Confidence 23678999999999999999874
No 102
>PRK11180 rluD 23S rRNA pseudouridine synthase D; Provisional
Probab=100.00 E-value=7.9e-41 Score=364.10 Aligned_cols=227 Identities=41% Similarity=0.672 Sum_probs=181.3
Q ss_pred cccCCEEEEEcCCCCCCCCcccccCCCccEEEecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccc
Q psy8199 2 IISGYELIIIKPKKNFFLNKTEKKVIKLDIIYEDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVH 81 (965)
Q Consensus 2 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 81 (965)
|..||.|.+..+.... .........++|||||++|+|+|||+|++||++.+....++.+.+...++.....+++.+||
T Consensus 59 v~~gD~I~v~~~~~~~--~~~~~~~~~~~iiyed~~~lvvnKP~gl~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~~vh 136 (325)
T PRK11180 59 VLGGEQVAIDAEIEEE--ARFEPQDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVH 136 (325)
T ss_pred cCCCCEEEEeeccccc--cCCCCCCCCCcEEEECCCEEEEECCCCCeEeCCCCCCCCcHHHHHHHHhhhccCCcccceec
Confidence 5667877765322110 01112334679999999999999999999999877656788888877665433345688999
Q ss_pred cCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEEEEEcCccCCCceEeeccccCCCCCeeEEEccCCCCcceEEEEEE
Q psy8199 82 RLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYLAMVWGIPKLNGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYER 161 (965)
Q Consensus 82 RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 161 (965)
|||++||||||||||.++++.|+++|+.+.+.|+|+|+|.|.+++++.++.++.........+.+. .+++++.|.|++
T Consensus 137 RLD~~TSGlll~Ak~~~~~~~l~~~~~~~~v~K~Y~A~v~G~~~~~~~i~~~l~~~~~~~~~~~~~--~~gk~a~T~~~~ 214 (325)
T PRK11180 137 RLDKDTTGLMVVAKTVPAQTRLVEALQKREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVH--PMGKPAVTHYRI 214 (325)
T ss_pred cCCCCCceeEEEECCHHHHHHHHHHHHhCCcceEEEEEEecCCCCCCEEECceecCCCcCcEEEeC--CCCcEEeEEEEE
Confidence 999999999999999999999999999999999999999999988888888886654433333333 368999999999
Q ss_pred eEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCCceecCCCCCccccc------c-----ccccccccccccccccccc
Q psy8199 162 LATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGHGIVGDNLYGKKYSK------S-----LIFNRQALHAYKLGLIHPK 230 (965)
Q Consensus 162 ~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~pi~gD~~~~~~~~~------~-----~~~~~~~Lha~~l~f~~p~ 230 (965)
+... .++|+++|+|.|||+||||+||+++||||+||++||..... . ..+.+++||++++.|.||.
T Consensus 215 l~~~----~~~slv~~~~~TGRtHQIRvhla~lG~PI~GD~~Yg~~~~~~~~~~~~~~~~~~~~~r~~Lha~~l~f~hP~ 290 (325)
T PRK11180 215 MEHF----RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDQVYGGRPRPPKGASEEFISTLRKFDRQALHATMLRLYHPI 290 (325)
T ss_pred eEEc----CCeEEEEEEeCCCCHHHHHHHHHhCCCCEeCccccCCCcccccccchhhhhhccccchhhhhcceeEeeCCC
Confidence 9875 67899999999999999999999999999999999964210 0 0246789999999999998
Q ss_pred Cccccc
Q psy8199 231 NNLKLK 236 (965)
Q Consensus 231 ~~~~~~ 236 (965)
++....
T Consensus 291 ~~~~~~ 296 (325)
T PRK11180 291 TGIEME 296 (325)
T ss_pred CCCeEE
Confidence 876543
No 103
>PRK09613 thiH thiamine biosynthesis protein ThiH; Reviewed
Probab=100.00 E-value=7.1e-40 Score=364.55 Aligned_cols=326 Identities=18% Similarity=0.307 Sum_probs=278.9
Q ss_pred cCHHHHHHHHHhhhc-ccccHHHHHHhcCCC----chhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCC
Q psy8199 629 LNKNEIQHMTSAIFQ-TFNELDEVINLFNLP----FNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQST 703 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~-~~~~~~e~l~l~~~~----~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~ 703 (965)
.+.+++.++++++.. ...+.++++.||+.+ +.+|+..|+++|++.| |+++.+++++++ ||.|+++|.||+|++
T Consensus 28 ~~~~~v~~il~Kal~~~~Ls~eEal~LL~~~~~~~le~L~~~A~~ir~~~~-Gn~I~lfapLyi-SN~C~n~C~YCgfs~ 105 (469)
T PRK09613 28 PDKDEIREILEKAKEKKGLSPEEAAVLLNVEDPELLEEIFEAAREIKEKIY-GNRIVLFAPLYI-SNYCVNNCVYCGFRR 105 (469)
T ss_pred CCHHHHHHHHHHHHcCCCCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHc-CCEEEEEEeccc-cCCCCCCCccCCCcc
Confidence 344557777777654 567889999998653 4677889999988877 899999999998 999999999999998
Q ss_pred cCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc----C--cEeEEecCCCCHHH
Q psy8199 704 HYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI----G--LETCLTLGMLNENQ 777 (965)
Q Consensus 704 ~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~----~--~~i~~~~~~~~~e~ 777 (965)
.. ....++. +++|||+++++.+.+.|+++++|++|.++ ...++++++++++.|++. + ..++++.+.++.+.
T Consensus 106 ~n-~~i~r~~-Ls~EEI~~ea~~~~~~G~~~i~LvsGe~p-~~~~~eyi~e~i~~I~~~~~~~g~i~~v~inig~lt~ee 182 (469)
T PRK09613 106 SN-KEIKRKK-LTQEEIREEVKALEDMGHKRLALVAGEDP-PNCDIEYILESIKTIYSTKHGNGEIRRVNVNIAPTTVEN 182 (469)
T ss_pred CC-CCCCceE-CCHHHHHHHHHHHHHCCCCEEEEEeCCCC-CCCCHHHHHHHHHHHHHhccccCcceeeEEEeecCCHHH
Confidence 53 3445554 89999999999999999999999988765 467899999999999973 2 36889999999999
Q ss_pred HHHHHHhCCCeEeccCCC-CHHHHhcccC---CCCHHHHHHHHHHHHHcCCc-eeeeEEEecCCCHHHHHHHHHHHHhcC
Q psy8199 778 AYRLKKVGLDYYNHNLDT-SPKLYGDIIS---TRDYENRLNTLKNVRNVGIN-ICCGGIIGLSESRDQRAELIFQLANLN 852 (965)
Q Consensus 778 l~~Lk~aG~~~i~i~~es-~~~~~~~i~~---~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl~et~ed~~~~l~~l~~l~ 852 (965)
+++||++|++++.+.+|| ++++|+++++ +++|+++++++++++++|++ |++++|+|||++.+|.++++.++++|+
T Consensus 183 y~~LkeaGv~~~~l~qETY~~ety~~~hp~g~k~~y~~Rl~t~~rA~~aGi~~Vg~G~L~GLge~~~E~~~l~~hl~~L~ 262 (469)
T PRK09613 183 YKKLKEAGIGTYQLFQETYHKPTYEKMHPSGPKSDYDWRLTAMDRAMEAGIDDVGIGVLFGLYDYKFEVLGLLMHAEHLE 262 (469)
T ss_pred HHHHHHcCCCEEEeccccCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHcCCCeeCeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999 9999999986 57999999999999999997 999999999999999999999999983
Q ss_pred C----CCCceeeccccccCCCCCCCCC-CCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEeeCC
Q psy8199 853 P----YPESVPINNLVQIKGTPLYGSS-ILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGD 927 (965)
Q Consensus 853 ~----~~~~i~~~~~~P~~gT~l~~~~-~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~g~ 927 (965)
. .++.|+++.|.|.+|||+++.+ ++++++++|++|++|+++|...|.+++ |+. .+++..++..|++.++.|+
T Consensus 263 ~~~gvgp~tIsvprl~P~~Gtpl~~~~~~vsd~e~lriiA~~RL~~P~~~I~lSt-RE~--~~~r~~~~~~gvt~~sags 339 (469)
T PRK09613 263 ERFGVGPHTISVPRLRPADGSDLENFPYLVSDEDFKKIVAILRLAVPYTGMILST-RES--AELRREVLELGVSQISAGS 339 (469)
T ss_pred HhhCCCCccccccceecCCCCCcccCCCCCCHHHHHHHHHHHHHHCCCCCceeec-CCC--HHHHHHHHhhcceeecccc
Confidence 2 2788999999999999997664 589999999999999999999999987 433 5678888999999999999
Q ss_pred ccccCCC-CCChhhHHHHHHcCCCcchhhhHHhhhhcc
Q psy8199 928 KLLTTDN-TKTNDDSKLLKKLGINTRNIKIKMKNNIKQ 964 (965)
Q Consensus 928 ~~~t~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 964 (965)
+ |..| +..++......||...+.|+++||+.+|++
T Consensus 340 ~--t~~ggy~~~~~~~~~~QF~~~d~r~~~ev~~~l~~ 375 (469)
T PRK09613 340 R--TGVGGYSEEEEEEEKAQFELGDHRSLDEVIRELCE 375 (469)
T ss_pred c--CCCCCcCCCCCCCCCCCccCCCCCCHHHHHHHHHH
Confidence 7 5554 322211223689999999999999999875
No 104
>cd02563 PseudoU_synth_TruC tRNA pseudouridine isomerase C: Pseudouridine synthases catalyze the isomerization of specific uridines in an tRNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. TruC makes psi65 in tRNAs. This psi residue is not universally conserved.
Probab=100.00 E-value=8.5e-41 Score=344.18 Aligned_cols=208 Identities=28% Similarity=0.387 Sum_probs=166.1
Q ss_pred ccEEEecCcEEEEECCCCCeeeeCCCCCc--ccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHH
Q psy8199 29 LDIIYEDNEIIILNKSAGLVVHPAIGNLS--GTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQ 106 (965)
Q Consensus 29 ~~i~~e~~~~lv~nKP~G~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~ 106 (965)
++|||||++|+|+|||+|++|++..+... ..+...+...+. .++++|||||++||||||||||+++++.|+++
T Consensus 1 ~~Ilyed~~~lvvnKP~G~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~vhRLD~~TSGlll~Ak~~~~~~~l~~~ 75 (223)
T cd02563 1 LEILYQDEHLVAINKPSGLLVHRSELDRHETRFALQTLRDQLG-----QHVYPVHRLDRPTSGVLLFALSSEVARKLGEQ 75 (223)
T ss_pred CcEEEecCCEEEEECCCCCeEcCCCCCCCCcHHHHHHHHHHcC-----CCcccccCCCCCCeEEEEEEECHHHHHHHHHH
Confidence 36999999999999999999998764322 233344433332 35789999999999999999999999999999
Q ss_pred HHcCCcCeEEEEEEcCccCCCceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEee-------ccCCcEEEEEEEe
Q psy8199 107 LKMHIVQRKYLAMVWGIPKLNGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGI-------INKKHISLIRCNL 179 (965)
Q Consensus 107 ~~~~~~~K~Y~a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~-------~~~~~~s~~~~~~ 179 (965)
|++++++|+|+|+|.|.++.++.++.++..+........+....+++.+.|.|+++.... ....++|+++|+|
T Consensus 76 f~~~~v~K~Y~alv~G~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~a~t~~~~l~~~~~~~~~~~~~~~~~slv~~~~ 155 (223)
T cd02563 76 FTEHRVHKTYLAVVRGYVPESGTIDYPLSEELDKLADKFASDDKAPQAATTHYRLLAVEELPVVVGKYPTSRYSLVELTP 155 (223)
T ss_pred HhcCceeEEEEEEEECccCCCCeEEEeeeeCCCccceEEeecCCCCceeEEEEEEeeecccccccccCCCCCeEEEEEEe
Confidence 999999999999999998778888888877655444334433346889999999997531 1123589999999
Q ss_pred CCCcccHHHHHHHHhCCceecCCCCCccccc-----ccccccccccccccccccccCcccccccccCCC
Q psy8199 180 KTGRTHQIRVHMQWLGHGIVGDNLYGKKYSK-----SLIFNRQALHAYKLGLIHPKNNLKLKWRINLPD 243 (965)
Q Consensus 180 ~tGr~hQIR~~~~~~g~pi~gD~~~~~~~~~-----~~~~~~~~Lha~~l~f~~p~~~~~~~~~~~~p~ 243 (965)
.|||+||||+||+++||||+||.+||..... .....+++||++++.|+||.++....+ ..|+
T Consensus 156 ~TGR~HQIRvhla~lG~PIvGD~~Yg~~~~~~~~~~~~~~~rl~Lha~~L~F~hP~t~~~~~~--~a~~ 222 (223)
T cd02563 156 HTGRKHQLRRHLAHIRHPIIGDTTHGDGRHNRFFREHFGCHRLLLAATRLEFTHPVTGERLLI--EAPL 222 (223)
T ss_pred CCCCHHHHHHHHHHcCCCeeCCcccCCcccChhHHhhcCCccceeecCeeEeeCCCCCCeEEE--EccC
Confidence 9999999999999999999999999965321 123467899999999999998887654 3554
No 105
>cd02558 PSRA_1 PSRA_1: Pseudouridine synthase, a subgroup of the RluA family. This group is comprised of bacterial proteins assigned to the RluA family of pseudouridine synthases. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. The RluA family is comprised of proteins related to Escherichia coli RluA.
Probab=100.00 E-value=1.2e-40 Score=346.82 Aligned_cols=224 Identities=23% Similarity=0.224 Sum_probs=173.4
Q ss_pred cccCCEEEEEcCCCCCCCCcccccCCCccEEEecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccc
Q psy8199 2 IISGYELIIIKPKKNFFLNKTEKKVIKLDIIYEDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVH 81 (965)
Q Consensus 2 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 81 (965)
|+.||.|.+..+... .......++|||||++|+|+|||+|++||++.+....++.+.+...+. .+.+.+||
T Consensus 17 l~~gd~i~~~~~~~~-----~~~~~~~~~Iiyed~~~lvvnKPaGl~~~~~~~~~~~t~~~~l~~~~~----~~~~~~vh 87 (246)
T cd02558 17 YRPGTFVWYYRELPD-----EPPIPFEETILHQDEHLLVADKPHFLPVTPRGRYVTETLLVRLRRQTG----NPDLTPAH 87 (246)
T ss_pred ecCCCEEEEeCCCCC-----CCCCCCCcceEEecCCEEEEECCCCCccCCCCcchhhhHHHHHHHHhC----CCcccccc
Confidence 678999977432111 112234588999999999999999999999877766788887765543 24678999
Q ss_pred cCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEEEEEcCccCCC-c-eEeeccccCCCCCeeEEEccCCCCcceEEEE
Q psy8199 82 RLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYLAMVWGIPKLN-G-MINAAIMRNPHNRIKMTVSKNFNAKPALTYY 159 (965)
Q Consensus 82 RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~a~v~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 159 (965)
|||++||||||||||+++++.++.+|+++.++|+|+|+|.|.++.+ + .+..++..+... ...... .+++.+.|+|
T Consensus 88 RLD~~TSGlll~Ak~~~~~~~l~~~~~~~~v~K~YlA~v~G~~~~~~~~~~~~~i~~~~~~--~~~~~~-~~~~~a~T~~ 164 (246)
T cd02558 88 RLDRLTAGLVLFSKRPETRGAYQTLFARREVSKTYEAVAPYVPALTFPLTVRSRIVKGRGF--FQAREV-EGEPNAETRI 164 (246)
T ss_pred cCCCCceeEEEEEcCHHHHHHHHHHHHcCCccEEEEEEEecCCCCCCCcceeccccccCCc--ceeecc-CCCCCceEEE
Confidence 9999999999999999999999999999999999999999988643 2 345455443221 111111 3567899999
Q ss_pred EEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCCceecCCCCCcccccc-ccc-ccccccccccccccccCcccccc
Q psy8199 160 ERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGHGIVGDNLYGKKYSKS-LIF-NRQALHAYKLGLIHPKNNLKLKW 237 (965)
Q Consensus 160 ~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~pi~gD~~~~~~~~~~-~~~-~~~~Lha~~l~f~~p~~~~~~~~ 237 (965)
+++... .++|+++|+|.|||+||||+||+++||||+||++||...... ..+ .+++||++++.|.||++.....+
T Consensus 165 ~~l~~~----~~~slv~~~l~TGRtHQIRvhla~lG~PIvGD~~Yg~~~~~~~~~~~~~~~Lha~~l~f~hP~t~~~~~~ 240 (246)
T cd02558 165 ELLARR----GGWGLYRLSPHTGKTHQLRVHMAALGVPILNDPFYPVLLDKDPDDFSRPLQLLAKELEFTDPLTGRPRRF 240 (246)
T ss_pred EEEEec----CCeEEEEEEeCCCCHHHHHHHHHHCCCcccCCccCCCCCcccccccccCchhhhcccCccCCCCCCEEEE
Confidence 999864 678999999999999999999999999999999999642111 111 34789999999999999887764
Q ss_pred cccCCC
Q psy8199 238 RINLPD 243 (965)
Q Consensus 238 ~~~~p~ 243 (965)
..|+
T Consensus 241 --~~~~ 244 (246)
T cd02558 241 --ESGR 244 (246)
T ss_pred --ecCC
Confidence 3444
No 106
>PRK05927 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=358.63 Aligned_cols=304 Identities=17% Similarity=0.194 Sum_probs=255.9
Q ss_pred cccHHHHHHhc-CCCchhHHHHHHHHHHHhcCCCeEE--EeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHH
Q psy8199 645 FNELDEVINLF-NLPFNDLLFRAQKVHRKYFDANEIE--LAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVI 721 (965)
Q Consensus 645 ~~~~~e~l~l~-~~~~~~l~~~a~~~~~~~~~g~~~~--~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~ 721 (965)
..+.+|++.|+ ..++.+|...|+++|+++++|+.++ ++..+++ ||.|+.+|.||+|++..+. ...| .+++|||+
T Consensus 6 ~is~ee~l~L~~~~~l~~L~~~A~~iR~~~~~G~~V~~i~n~~i~~-Tn~C~~~C~fCaf~~~~~~-~~~y-~ls~eei~ 82 (350)
T PRK05927 6 RISFQEGLELFLYSPLEELQEHADSLRKQRYPQNTVTYVLDANPNY-TNICKIDCTFCAFYRKPHS-SDAY-LLSFDEFR 82 (350)
T ss_pred CCCHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCeEEEEcccCCcc-chhhhcCCccCCccCCCCC-cccc-ccCHHHHH
Confidence 45678888888 4467899999999988887568877 5567788 9999999999999875333 3445 59999999
Q ss_pred HHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--CcEe-----------EEecCCCCHHHHHHHHHhCCCe
Q psy8199 722 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLET-----------CLTLGMLNENQAYRLKKVGLDY 788 (965)
Q Consensus 722 ~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~--~~~i-----------~~~~~~~~~e~l~~Lk~aG~~~ 788 (965)
+.++++.+.|+++++|++|.++ ..++++++++++.||+. ++.+ +.+.|.++++.+++||+||+++
T Consensus 83 ~~a~~~~~~G~~~i~i~gG~~p--~~~~e~~~~~i~~ik~~~p~l~~~~~s~~ei~~~~~~~G~~~~e~l~~Lk~aGl~~ 160 (350)
T PRK05927 83 SLMQRYVSAGVKTVLLQGGVHP--QLGIDYLEELVRITVKEFPSLHPHFFSAVEIAHAAQVSGISTEQALERLWDAGQRT 160 (350)
T ss_pred HHHHHHHHCCCCEEEEeCCCCC--CCCHHHHHHHHHHHHHHCCCCcccCCCHHHHHHHHHhcCCCHHHHHHHHHHcCccc
Confidence 9999999999999999988765 47899999999999974 3432 4568999999999999999999
Q ss_pred Eec-cCCC-CHHHHhcccCCC-CHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccc
Q psy8199 789 YNH-NLDT-SPKLYGDIISTR-DYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ 865 (965)
Q Consensus 789 i~i-~~es-~~~~~~~i~~~~-~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P 865 (965)
+.. ++|+ ++...+.+++.+ ++++|+++++.||++|+++++++|||+|||++|+++++..|++++ .+.-.+..|+|
T Consensus 161 l~g~~~Et~~~~~~~~~~p~k~~~~~rl~~i~~A~~lGi~~~sg~l~G~gEt~e~ri~~l~~Lr~lq--d~~~gf~~fIp 238 (350)
T PRK05927 161 IPGGGAEILSERVRKIISPKKMGPDGWIQFHKLAHRLGFRSTATMMFGHVESPEDILLHLQTLRDAQ--DENPGFYSFIP 238 (350)
T ss_pred CCCCCchhCCHHHhhccCCCCCCHHHHHHHHHHHHHcCCCcCceeEEeeCCCHHHHHHHHHHHHHhh--HhhCCeeeeee
Confidence 998 8999 677777777755 579999999999999999999999999999999999999999999 44445666666
Q ss_pred c----CCCCCCCC--CCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEe---eCCccccCCCC-
Q psy8199 866 I----KGTPLYGS--SILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIF---YGDKLLTTDNT- 935 (965)
Q Consensus 866 ~----~gT~l~~~--~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~---~g~~~~t~~~~- 935 (965)
. +||||+.. ++.++++++|++|++|+++|++ .+++++|..+|.+.++.+|.+|||+++ ..+++....|.
T Consensus 239 ~~~~~~~tpl~~~~~~~~s~~e~Lr~iAv~Rl~lp~~-~~i~~~w~~~G~~~~q~~L~~GanDlggt~~~e~v~~~ag~~ 317 (350)
T PRK05927 239 WSYKPGNTALGRRVPHQASPELYYRILAVARIFLDNF-DHIAASWFGEGKEEGAKGLHYGADDFGGTILDESVHKCTGWD 317 (350)
T ss_pred cCcCCCCCccccCCCCCCCHHHHHHHHHHHHHhCCCC-CcccCCccccCHHHHHHHHhCCCccccCCCccceeeccCCCC
Confidence 5 68999754 2689999999999999999987 489999999999999999999999754 44555444443
Q ss_pred ---CChhhHHHHHHcCCCcchhhh
Q psy8199 936 ---KTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 936 ---~~~~~~~~~~~~g~~~~~~~~ 956 (965)
+.++..++++++|++|.+|+.
T Consensus 318 ~~~~~~~l~~~i~~~G~~~~~R~~ 341 (350)
T PRK05927 318 LQSSEEEICAMILSEGFIPVERNT 341 (350)
T ss_pred CcCCHHHHHHHHHHcCCCeeeecC
Confidence 368889999999999999875
No 107
>TIGR03699 mena_SCO4550 menaquinone biosynthesis protein, SCO4550 family. members of this protein family are involved in menaquinone biosynthesis by an alternate pathway via futalosine.
Probab=100.00 E-value=4.9e-40 Score=362.92 Aligned_cols=303 Identities=17% Similarity=0.244 Sum_probs=256.6
Q ss_pred ccHHHHHHhcCC-CchhHHHHHHHHHHHhcCCCeEEEe--EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHH
Q psy8199 646 NELDEVINLFNL-PFNDLLFRAQKVHRKYFDANEIELA--VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVIT 722 (965)
Q Consensus 646 ~~~~e~l~l~~~-~~~~l~~~a~~~~~~~~~g~~~~~~--~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~ 722 (965)
.+.+|++.||+. ++.+|+..|+++|++++.|++++++ .++++ |++|+++|.||++++.... ..++.+++|+|++
T Consensus 3 l~~~~~~~ll~~~~~~~l~~~A~~vr~~~~~g~~v~~~~~~~i~~-s~~C~~~C~fC~~~~~~~~--~~~~~ls~eei~~ 79 (340)
T TIGR03699 3 LSREEALELYKEADLLALGALADEVRRRRHPGNIVTFVVDRNINY-TNICVVGCKFCAFYRAPGH--PEGYVLSVEEILQ 79 (340)
T ss_pred CCHHHHHHHccCCcHHHHHHHHHHHHHHhcCCCeEEEEeeccccc-chhhccCCccCCcccCCCC--ccccCCCHHHHHH
Confidence 456788888854 6788999999998777658888754 56666 9999999999997653222 1234589999999
Q ss_pred HHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcEe-------------EEecCCCCHHHHHHHHHhCCCeE
Q psy8199 723 AAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLET-------------CLTLGMLNENQAYRLKKVGLDYY 789 (965)
Q Consensus 723 ~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~i-------------~~~~~~~~~e~l~~Lk~aG~~~i 789 (965)
.++++.+.|+++|+|++|.++ ..+.+++.++++.|++.++.+ +.+.|..+++.+++||+||++++
T Consensus 80 ~~~~~~~~G~~~i~l~gG~~p--~~~~~~~~~li~~Ik~~~~~i~~~~~s~~ei~~~~~~~g~~~~e~l~~Lk~aG~~~~ 157 (340)
T TIGR03699 80 KIEELVAYGGTQILLQGGVNP--DLGLDYYEDLFRAIKARFPHIHIHSFSPVEIVYIAKKEGLSLREVLERLKEAGLDSI 157 (340)
T ss_pred HHHHHHHcCCcEEEEecCCCC--CCCHHHHHHHHHHHHHHCCCcCCCCCCHHHHHHHhccCCCCHHHHHHHHHHcCCCcC
Confidence 999999999999999888655 456888999999999754332 22457777999999999999999
Q ss_pred ec-cCCC-CHHHHhcccCC-CCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccc-
Q psy8199 790 NH-NLDT-SPKLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ- 865 (965)
Q Consensus 790 ~i-~~es-~~~~~~~i~~~-~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P- 865 (965)
.. +.|+ ++++.+.+++. .++++|+++++.++++|+++++++|+|+|||.+|++++++.+++++ .+.+.+..|+|
T Consensus 158 ~~~g~E~~~~~~~~~~~~~~~s~~~~l~~i~~a~~~Gi~v~~~~iiGlgEt~ed~~~~l~~l~~l~--~~~~~~~~fIP~ 235 (340)
T TIGR03699 158 PGGGAEILSDRVRKIISPKKISSEEWLEVMETAHKLGLPTTATMMFGHVETLEDRIEHLERIRELQ--DKTGGFTAFIPW 235 (340)
T ss_pred CCCcccccCHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCccceeEeeCCCCHHHHHHHHHHHHHhc--hhhCCeeEEEee
Confidence 85 7999 89999999864 5899999999999999999999999999999999999999999999 66655555555
Q ss_pred ---cCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccE---EeeCCccccCCCCCC--
Q psy8199 866 ---IKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANS---IFYGDKLLTTDNTKT-- 937 (965)
Q Consensus 866 ---~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~---~~~g~~~~t~~~~~~-- 937 (965)
++||||++.+++++++.++++|++|+++|+ .++++++|..++.+.++.+|.+|||+ ++..++++|+.|.+.
T Consensus 236 ~f~p~~tpl~~~~~~~~~e~l~~iA~~Rl~lp~-~~~i~~~~~~~g~~~~~~~l~~Gan~~~g~~~~~~~~~~~g~~~~~ 314 (340)
T TIGR03699 236 TFQPGNTELGKKRPATSTEYLKVLAISRIFLDN-IPNIQASWVTQGKEVGQLALHFGANDFGSTMLEENVVAAAGATHRA 314 (340)
T ss_pred cccCCCCcccCCCCCCHHHHHHHHHHHHHcCCC-CCcccCCccccChHHHHHHHhcCCccCCCccccccccccCCCCCCC
Confidence 379999998889999999999999999999 69999999988888899999999998 455455778888777
Q ss_pred --hhhHHHHHHcCCCcchhhh
Q psy8199 938 --NDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 938 --~~~~~~~~~~g~~~~~~~~ 956 (965)
+++.+|++++|++|.+|+.
T Consensus 315 ~~~~~~~~i~~~g~~~~~r~~ 335 (340)
T TIGR03699 315 SREEIIRIIREAGFIPAQRDT 335 (340)
T ss_pred CHHHHHHHHHHcCCCeeeecC
Confidence 9999999999999999874
No 108
>PRK11025 23S rRNA pseudouridylate synthase C; Provisional
Probab=100.00 E-value=1.5e-40 Score=360.04 Aligned_cols=208 Identities=33% Similarity=0.453 Sum_probs=167.5
Q ss_pred CCccEEEecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHH
Q psy8199 27 IKLDIIYEDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQ 106 (965)
Q Consensus 27 ~~~~i~~e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~ 106 (965)
..++|+|||++|+|+|||+|++||++.+.. .++.+.+....+ ....+++|||||++||||||||||+++++.|+++
T Consensus 91 ~~~~Ilyed~~~lvvnKP~gl~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~vhRLD~~TSGlll~Ak~~~a~~~l~~~ 166 (317)
T PRK11025 91 LADVILYEDDHILVLNKPSGTAVHGGSGLS-FGVIEGLRALRP---EARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQ 166 (317)
T ss_pred CcCCEEEECCCEEEEECCCCCcCcCCCCCC-ccHHHHHHHhcc---CCCcCceeCCCCCCCceEEEEEcCHHHHHHHHHH
Confidence 457899999999999999999999876543 346666654433 1234678999999999999999999999999999
Q ss_pred HHcCCcCeEEEEEEcCccCC-CceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCccc
Q psy8199 107 LKMHIVQRKYLAMVWGIPKL-NGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTH 185 (965)
Q Consensus 107 ~~~~~~~K~Y~a~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~h 185 (965)
|+++.++|+|+|+|.|.+.. .+.++.++..+........+....++++|.|.|+++... .++|+|+|+|.|||+|
T Consensus 167 ~~~~~v~K~Y~a~v~G~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~gk~a~T~~~~l~~~----~~~sLv~~~~~TGRtH 242 (317)
T PRK11025 167 LREKGMQKDYLALVRGQWQSHVKVVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERY----AFATLVRASPVTGRTH 242 (317)
T ss_pred HHhCCccEEEEEEEeCcccCCCceEecccccCcccCCceEEecCCCCccceEEEEEeEEc----CCcEEEEEEeCCCCHH
Confidence 99999999999999998865 578888887664332222222234789999999999875 6789999999999999
Q ss_pred HHHHHHHHhCCceecCCCCCccccc----ccccccccccccccccccccCcccccccccCCCc
Q psy8199 186 QIRVHMQWLGHGIVGDNLYGKKYSK----SLIFNRQALHAYKLGLIHPKNNLKLKWRINLPDD 244 (965)
Q Consensus 186 QIR~~~~~~g~pi~gD~~~~~~~~~----~~~~~~~~Lha~~l~f~~p~~~~~~~~~~~~p~~ 244 (965)
|||+||+++||||+||.+||.+... .....+++||++++.|.||.++....+ ..|++
T Consensus 243 QIRvhla~lG~PIlGD~~Yg~~~~~~~~~~~~~~r~~LHa~~l~f~~P~~~~~~~~--~aplP 303 (317)
T PRK11025 243 QIRVHTQYAGHPIAFDDRYGDREFDQQLTGTGLNRLFLHAAALKFTHPGTGEVMRI--EAPLD 303 (317)
T ss_pred HHHHHHHHCCCCEECCcccCCcccchhhhccCCcchhhhcCcceeeCCCCCCeEEE--EcCCC
Confidence 9999999999999999999964211 112467899999999999998876654 34543
No 109
>TIGR00005 rluA_subfam pseudouridine synthase, RluA family. modifies uracil-65 in transfer RNAs to pseudouridine.
Probab=100.00 E-value=3.9e-40 Score=357.25 Aligned_cols=230 Identities=45% Similarity=0.697 Sum_probs=180.8
Q ss_pred cccCCEEEEEcCCCCCCCCcccccCCCccEEEecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccc
Q psy8199 2 IISGYELIIIKPKKNFFLNKTEKKVIKLDIIYEDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVH 81 (965)
Q Consensus 2 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 81 (965)
|+.||.|.+..++. ... ........++|+|||++|+|+|||+|++||+.++....++.+.+..++.......++++||
T Consensus 47 v~~gd~I~i~~~~~-~~~-~~~~~~~~~~i~~ed~~~lvvnKP~g~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~~vh 124 (299)
T TIGR00005 47 VKDGDRITVRVPEE-EEH-EVPPQDIPLDILFEDEDIIVINKPSGLVVHPGGGNPFGTVLNALLAHCPPIAGVERVGIVH 124 (299)
T ss_pred CCCCCEEEEecCCc-ccc-cCCccCCCccEEEeCCCEEEEECCCCCeEeCCCCCCcccHHHHHHHhcccccCCCcCceEC
Confidence 56677776643221 010 1111223468999999999999999999999887666789998877664222234688999
Q ss_pred cCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEEEEEcCccCC-CceEeeccccCCCCCeeEEEccCCCCcceEEEEE
Q psy8199 82 RLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYLAMVWGIPKL-NGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYE 160 (965)
Q Consensus 82 RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~a~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 160 (965)
|||++||||||||||+++++.|+++|+++.+.|+|+|+|.|.+++ ++.++.++..+........+....+++++.|+|+
T Consensus 125 RLD~~TSGlll~ak~~~~~~~l~~~~~~~~v~K~Y~a~v~g~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~k~a~t~~~ 204 (299)
T TIGR00005 125 RLDRDTSGLMVVAKTPLALRELQRQLKNRTVTKEYVALVHGQFDSGGGTVDAPLGRVPNNRGLMAVHPSSEGKPAVTHFR 204 (299)
T ss_pred CCCCCCceEEEEEcCHHHHHHHHHHHHhCCcceEEEEEEeccccCCCCEEeCceecCCCCCceEEEecCCCCCeeeEEEE
Confidence 999999999999999999999999999999999999999999874 5788888876554444444433336899999999
Q ss_pred EeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCCceecCCCCCccccc------ccccccccccccccccccccCccc
Q psy8199 161 RLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGHGIVGDNLYGKKYSK------SLIFNRQALHAYKLGLIHPKNNLK 234 (965)
Q Consensus 161 ~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~pi~gD~~~~~~~~~------~~~~~~~~Lha~~l~f~~p~~~~~ 234 (965)
++... .++|+++|+|.|||+||||+||+++||||+||.+||.+... .....+++||++++.|.||.++..
T Consensus 205 ~l~~~----~~~slv~~~l~tGR~HQIR~hla~lG~pI~gD~~Yg~~~~~~~~~~~~~~~~r~~Lha~~l~f~~p~~~~~ 280 (299)
T TIGR00005 205 VLERF----GNASLVECELETGRTHQIRVHLQYLGHPLAGDPLYGNKPVPGNNLNGLLNFDRQALHAYELGFIHPATGEI 280 (299)
T ss_pred EeEEc----CCeEEEEEEeCCCChHHHHHHHHHCCCcEeCccccCCccccccccccccCCcchhhccCeeeccCCCCCCE
Confidence 99864 67899999999999999999999999999999999975321 122467899999999999988766
Q ss_pred ccc
Q psy8199 235 LKW 237 (965)
Q Consensus 235 ~~~ 237 (965)
..+
T Consensus 281 ~~~ 283 (299)
T TIGR00005 281 LEF 283 (299)
T ss_pred EEE
Confidence 543
No 110
>PRK10158 23S rRNA/tRNA pseudouridine synthase A; Provisional
Probab=100.00 E-value=2.6e-40 Score=338.35 Aligned_cols=199 Identities=33% Similarity=0.516 Sum_probs=165.5
Q ss_pred CccEEEecCcEEEEECCCCCeeeeCCC-CCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHH
Q psy8199 28 KLDIIYEDNEIIILNKSAGLVVHPAIG-NLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQ 106 (965)
Q Consensus 28 ~~~i~~e~~~~lv~nKP~G~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~ 106 (965)
.++|||||++|+|+|||+|++|+++.. ....++.+.+...++ ++.+|||||++||||||||+|.++++.|+++
T Consensus 13 ~~~iiyed~~~lvvnKPaGl~~~~~~~~~~~~sl~~~l~~~~~------~~~~vhRLDr~TSGlll~Akt~~~~~~l~~~ 86 (219)
T PRK10158 13 WLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYP------QAESVHRLDMATSGVIVVALTKAAERELKRQ 86 (219)
T ss_pred CCCEEEeCCCEEEEECCCCCcEeCCCCCccchhHHHHHHHhCC------CCCEECCCCCCCceEEEEECCHHHHHHHHHH
Confidence 468999999999999999999998763 334577777765553 5789999999999999999999999999999
Q ss_pred HHcCCcCeEEEEEEcCccCC-CceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCccc
Q psy8199 107 LKMHIVQRKYLAMVWGIPKL-NGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTH 185 (965)
Q Consensus 107 ~~~~~~~K~Y~a~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~h 185 (965)
|.++++.|+|+|+|.|.+++ ++.++.++..+........+.. .+++.+.|.|+++.+. ....++++|+|.|||+|
T Consensus 87 f~~~~v~K~Yla~v~G~~~~~~~~i~~~i~~~~~~~~~~~~~~-~~gk~a~t~~~~l~~~---~~~~sll~~~~~TGRtH 162 (219)
T PRK10158 87 FREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCY-ETGKPAQTEYEVVEYA---ADNTARVVLKPITGRSH 162 (219)
T ss_pred HHhCCccEEEEEEEecccCCCCcEEecceecCCCCCceEEecC-CCCceeeEEEEEEEEc---CCCCEEEEEEeCCCCHH
Confidence 99999999999999999864 5788888876654444444442 3689999999999874 13358999999999999
Q ss_pred HHHHHHHHhCCceecCCCCCcccccccccccccccccccccccccCcccccc
Q psy8199 186 QIRVHMQWLGHGIVGDNLYGKKYSKSLIFNRQALHAYKLGLIHPKNNLKLKW 237 (965)
Q Consensus 186 QIR~~~~~~g~pi~gD~~~~~~~~~~~~~~~~~Lha~~l~f~~p~~~~~~~~ 237 (965)
|||+||+++||||+||.+||...... ...+++||++++.|+||.+.....+
T Consensus 163 QIR~hla~lG~PIvGD~~Yg~~~~~~-~~~r~~Lha~~l~f~~P~~~~~~~~ 213 (219)
T PRK10158 163 QLRVHMLALGHPILGDRFYASPEARA-MAPRLLLHAEMLTITHPAYGNSMTF 213 (219)
T ss_pred HHHHHHHHCCCcEECCcccCCccccc-cccchhhhhCccCccCCCCCCeEEE
Confidence 99999999999999999999643221 2357899999999999988776543
No 111
>PRK11112 tRNA pseudouridine synthase C; Provisional
Probab=100.00 E-value=1.7e-40 Score=347.93 Aligned_cols=203 Identities=29% Similarity=0.399 Sum_probs=161.2
Q ss_pred ccEEEecCcEEEEECCCCCeeeeCCCCCcc--cHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHH
Q psy8199 29 LDIIYEDNEIIILNKSAGLVVHPAIGNLSG--TLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQ 106 (965)
Q Consensus 29 ~~i~~e~~~~lv~nKP~G~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~ 106 (965)
++|||||++|+|+|||+|++||+....... .+.+.+...+. ..+++|||||++||||||||||+++++.|+++
T Consensus 2 l~IlyEd~~~lvvnKPaGl~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~VHRLDr~TSGlll~Ak~~~~~~~L~~~ 76 (257)
T PRK11112 2 LEILYQDEWLVAVNKPAGWLVHRSWLDRHETVFVMQTVRDQIG-----QHVFTAHRLDRPTSGVLLMALSSEVARLLAQQ 76 (257)
T ss_pred CcEEEecCCEEEEECCCCCeecCCCCCCCchHHHHHHHHHHhC-----CCceeeccCCCCCeeEEEEECCHHHHHHHHHH
Confidence 579999999999999999999987533222 34455544432 25779999999999999999999999999999
Q ss_pred HHcCCcCeEEEEEEcCccCCCceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEee-------ccCCcEEEEEEEe
Q psy8199 107 LKMHIVQRKYLAMVWGIPKLNGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGI-------INKKHISLIRCNL 179 (965)
Q Consensus 107 ~~~~~~~K~Y~a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~-------~~~~~~s~~~~~~ 179 (965)
|+++++.|+|+|+|.|.+..++.++.++..+.............+++++.|.|+++.... ....++|+++|+|
T Consensus 77 f~~~~v~K~Y~Alv~G~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~k~a~T~~~~l~~~~~~~~~~~~~~~~~slv~i~~ 156 (257)
T PRK11112 77 FEQHQIQKTYHAIVRGWLMEEAVLDYPLKEELDKIADKFAREDKAPQPAVTHYRGLATVEMPVATGRYPTTRYSLVELEP 156 (257)
T ss_pred HHhCCcceEEEEEEEeEeCCCCeEeeeeeecccccceeecccCCCCeEeEEEEEEEEEecccccccccCCCCeEEEEEEc
Confidence 999999999999999998777888888876533322222222346899999999997531 1224689999999
Q ss_pred CCCcccHHHHHHHHhCCceecCCCCCccccc-----ccccccccccccccccccccCccccc
Q psy8199 180 KTGRTHQIRVHMQWLGHGIVGDNLYGKKYSK-----SLIFNRQALHAYKLGLIHPKNNLKLK 236 (965)
Q Consensus 180 ~tGr~hQIR~~~~~~g~pi~gD~~~~~~~~~-----~~~~~~~~Lha~~l~f~~p~~~~~~~ 236 (965)
.|||+||||+||+++||||+||.+||..... .....+++||++++.|.||.++....
T Consensus 157 ~TGRtHQIRvhla~lG~PIvGD~~Yg~~~~~~~~~~~~~~~rl~LHA~~L~F~hP~t~e~~~ 218 (257)
T PRK11112 157 KTGRKHQLRRHMAHLRHPIIGDTKHGDLRQNRSLAEHFGCSRLMLHASELSLTHPFTGEPLT 218 (257)
T ss_pred CCCChHHHHHHHHHcCCCEeCCcccCCcccchhhhhccCCcchhHhhCccCccCCCCCCEEE
Confidence 9999999999999999999999999974211 12246789999999999998877654
No 112
>TIGR02351 thiH thiazole biosynthesis protein ThiH. Members this protein family are the ThiH protein of thiamine biosynthesis, a homolog of the BioB protein of biotin biosynthesis. Genes for the this protein generally are found in operons with other thiamin biosynthesis genes.
Probab=100.00 E-value=2.2e-39 Score=357.76 Aligned_cols=314 Identities=20% Similarity=0.269 Sum_probs=270.6
Q ss_pred cCHHHHHHHHHhhhcccccHHHHHHhcCCC----chhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCc
Q psy8199 629 LNKNEIQHMTSAIFQTFNELDEVINLFNLP----FNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTH 704 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~~~~~~~e~l~l~~~~----~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~ 704 (965)
.+.++++++++ +...+.+|++.|++.+ +.+|+..|+++|++++ |+++.++.++++ ||.|+++|.||+|+..
T Consensus 21 ~~~~~~~~~l~---g~~ls~~e~~~Ll~~~~~~~l~~L~~~A~~ir~~~~-G~~v~l~~~i~~-Tn~C~~~C~yC~~s~~ 95 (366)
T TIGR02351 21 FTAADVERALN---KRHLSLEDFLALLSPAAEPYLEEMAQKAKKLTRKRF-GNTISLFTPLYL-SNYCSNKCVYCGFSMS 95 (366)
T ss_pred CCHHHHHHHHh---CCCCCHHHHHHHhCCCchHHHHHHHHHHHHHHHHHc-CCEEEEEeeeeE-CccccCCCCcCCCCCC
Confidence 44666666553 4567889999998653 6778999999988888 899999999997 9999999999999875
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcEeEEecCCCCHHHHHHHHHh
Q psy8199 705 YNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKV 784 (965)
Q Consensus 705 ~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~e~l~~Lk~a 784 (965)
++ ..+ +.+++|||.++++.+.+.|++++++++|..+ ...++++++++++.+++....+.++.+.++.+.++.|+++
T Consensus 96 ~~--~~~-~~Ls~eEI~~~a~~~~~~Gv~~i~lvgGe~p-~~~~~e~l~eii~~Ik~~~p~i~Iei~~lt~e~~~~Lk~a 171 (366)
T TIGR02351 96 NK--IKR-KKLNEEEIEREIEAIKKSGFKEILLVTGESE-KAAGVEYIAEAIKLAREYFSSLAIEVQPLNEEEYKKLVEA 171 (366)
T ss_pred CC--Ccc-CcCCHHHHHHHHHHHHhCCCCEEEEeeCCCC-CCCCHHHHHHHHHHHHHhCCccccccccCCHHHHHHHHHc
Confidence 33 334 4589999999999999999999999987644 4567999999999999866555566678999999999999
Q ss_pred CCCeEeccCCC-CHHHHhccc---CCCCHHHHHHHHHHHHHcCCc-eeeeEEEecCCCHHHHHHHHHHHHhcCC----CC
Q psy8199 785 GLDYYNHNLDT-SPKLYGDII---STRDYENRLNTLKNVRNVGIN-ICCGGIIGLSESRDQRAELIFQLANLNP----YP 855 (965)
Q Consensus 785 G~~~i~i~~es-~~~~~~~i~---~~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl~et~ed~~~~l~~l~~l~~----~~ 855 (965)
|++++++++|| +++.|++++ +.|++++++++++.++++|+. +++++|+|+||+.+|.++++.++++|+. ..
T Consensus 172 Gv~r~~i~lET~~~~~y~~i~~~g~~h~~~~rl~~i~~a~~aG~~~v~~g~i~Gl~e~~~d~~~~a~~l~~L~~~~~~~~ 251 (366)
T TIGR02351 172 GLDGVTVYQETYNEKKYKKHHLAGKKKDFRYRLNTPERAAKAGMRKIGIGALLGLDDWRTDAFFTAYHLRYLQKKYWKTE 251 (366)
T ss_pred CCCEEEEEeecCCHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCCCeeceeEEEeCchhHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999 899999998 578999999999999999997 8999999999999999999999999984 12
Q ss_pred CceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccch----hhHHHHhhcCccEEeeCCcccc
Q psy8199 856 ESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGE----TTQAFCFLAGANSIFYGDKLLT 931 (965)
Q Consensus 856 ~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~----~~~~~~l~~Gan~~~~g~~~~t 931 (965)
.+|+++.++|.+| |++...+.++.+++++++++|+++|+..|+++++++.... +++...+.+ +|++++|++ +|
T Consensus 252 ~sv~~~~l~P~~g-~~~~~~~l~~~~~~~~i~~~R~~~P~~~i~~s~g~~~~lrd~~~~~~~~~~~a-~~~~~~G~y-~~ 328 (366)
T TIGR02351 252 ISISVPRLRPCTN-GLKPKVIVTDRELVQIICAYRLFDPFVEISLSTRESKKFRDNVIPLGITKMSA-GSSTEPGGY-SS 328 (366)
T ss_pred ccccccccccCCC-CCCCCCcCCHHHHHHHHHHHHHhCcccccEEecCCCHHHHHHHHhhcceeecc-CcccCCCCc-CC
Confidence 6899999999999 9999899999999999999999999999999999965434 444455655 899999995 46
Q ss_pred CCC----------CCChhhHHHHHHcCCCcchh
Q psy8199 932 TDN----------TKTNDDSKLLKKLGINTRNI 954 (965)
Q Consensus 932 ~~~----------~~~~~~~~~~~~~g~~~~~~ 954 (965)
+.| ++++++.+||+++|+.|...
T Consensus 329 ~~~~~~qf~~~d~r~~~~~~~~i~~~g~~~~~~ 361 (366)
T TIGR02351 329 EKKGLEQFEISDERSVAEVEEDLRSKGLQPVWK 361 (366)
T ss_pred CCCCcCcccCCCCCCHHHHHHHHHHCCCeeccc
Confidence 666 89999999999999999654
No 113
>PRK07094 biotin synthase; Provisional
Probab=100.00 E-value=6.5e-38 Score=344.53 Aligned_cols=272 Identities=23% Similarity=0.365 Sum_probs=245.6
Q ss_pred cHHHHHHhcCCCc----hhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHH
Q psy8199 647 ELDEVINLFNLPF----NDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVIT 722 (965)
Q Consensus 647 ~~~e~l~l~~~~~----~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~ 722 (965)
+.+|++.||+.+. .+|...|+++|++++ |+++++++++++ |++|+++|.||+++... ....+++ +++++|++
T Consensus 2 t~~e~~~ll~~~~~~~~~~L~~~A~~~r~~~~-g~~v~~~~~i~~-s~gC~~~C~fC~~~~~~-~~~~r~~-ls~eei~~ 77 (323)
T PRK07094 2 TRDEILELLSNDDEEELKYLFKAADEVRKKYV-GDEVHLRGLIEF-SNYCRNNCLYCGLRRDN-KNIERYR-LSPEEILE 77 (323)
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhC-CCEEEEEEEEEE-CCCCCCCCEeCCcccCC-CCCcCcC-CCHHHHHH
Confidence 4678888886532 248899999988887 899999999999 99999999999988643 2223455 79999999
Q ss_pred HHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHh-cCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHH
Q psy8199 723 AAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLY 800 (965)
Q Consensus 723 ~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~-~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~ 800 (965)
+++.+.+.|++.|+|++|.++ ..+.+++.++++.+++ .++.+.++.+..+++.++.|+++|++++.+++|| +++.+
T Consensus 78 ~~~~~~~~g~~~i~l~gG~~~--~~~~~~l~~l~~~i~~~~~l~i~~~~g~~~~e~l~~Lk~aG~~~v~~glEs~~~~~~ 155 (323)
T PRK07094 78 CAKKAYELGYRTIVLQSGEDP--YYTDEKIADIIKEIKKELDVAITLSLGERSYEEYKAWKEAGADRYLLRHETADKELY 155 (323)
T ss_pred HHHHHHHCCCCEEEEecCCCC--CCCHHHHHHHHHHHHccCCceEEEecCCCCHHHHHHHHHcCCCEEEeccccCCHHHH
Confidence 999999999999999988644 3457899999999998 5888888999999999999999999999999999 89999
Q ss_pred hcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCH
Q psy8199 801 GDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDP 879 (965)
Q Consensus 801 ~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~ 879 (965)
+.+++++++++++++++.++++|+.+++++|+|+ |||.+++.++++++++++ ++.+++++|+|.||||+++.++.+.
T Consensus 156 ~~i~~~~s~~~~~~~i~~l~~~Gi~v~~~~iiGlpget~ed~~~~l~~l~~l~--~~~v~~~~~~P~pgTpl~~~~~~~~ 233 (323)
T PRK07094 156 AKLHPGMSFENRIACLKDLKELGYEVGSGFMVGLPGQTLEDLADDILFLKELD--LDMIGIGPFIPHPDTPLKDEKGGSL 233 (323)
T ss_pred HHhCCCCCHHHHHHHHHHHHHcCCeecceEEEECCCCCHHHHHHHHHHHHhCC--CCeeeeeccccCCCCCcccCCCCCH
Confidence 9999999999999999999999999999999999 899999999999999999 9999999999999999999988999
Q ss_pred HHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEeeC
Q psy8199 880 LEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYG 926 (965)
Q Consensus 880 ~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~g 926 (965)
++.+++++++|+++|+..|+..++|..++++.++.+|.+|||++|..
T Consensus 234 ~~~~~~~a~~R~~lp~~~i~~~~~~~~~~~~~~~~~l~~Gan~~~~~ 280 (323)
T PRK07094 234 ELTLKVLALLRLLLPDANIPATTALGTLNPDGREKGLKAGANVVMPN 280 (323)
T ss_pred HHHHHHHHHHHHhCcCCCCcccCCccccCchhHHHHHHcCCceecCC
Confidence 99999999999999999899999999898888899999999998853
No 114
>TIGR01621 RluA-like pseudouridine synthase Rlu family protein, TIGR01621. This model represents a clade of sequences within the pseudouridine synthase superfamily (pfam00849). The superfamily includes E. coli proteins: RluA, RluB, RluC, RluD, and RsuA. The sequences modeled here are most closely related to RluA. Neisseria, among those species hitting this model, does not appear to have an RluA homolog. It is presumed that these sequences function as pseudouridine synthases, although perhaps with different specificity.
Probab=100.00 E-value=4.3e-39 Score=328.35 Aligned_cols=184 Identities=28% Similarity=0.466 Sum_probs=153.7
Q ss_pred ccEEEecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHH
Q psy8199 29 LDIIYEDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLK 108 (965)
Q Consensus 29 ~~i~~e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~ 108 (965)
++|||||++|+|+|||+|++|+++.+. .++.+.+..... .+.+.+|||||++||||||||||+++++.|+++|+
T Consensus 2 ~~ilyed~~~lvvnKP~Gl~v~~~~~~--~~l~~~l~~~~~----~~~~~~VhRLDr~TSGlll~Ak~~~~~~~L~~~~~ 75 (217)
T TIGR01621 2 FEILFTHPDFLLINKHPGISVHKDDGE--TGLLQEVATQLG----VGQVWLVHRLDKMTSGILLLALNAESASELSQGFA 75 (217)
T ss_pred ceEEEeCCCEEEEECCCCCeECCCCCc--ChHHHHHHHhcC----CCCccEecCCCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 579999999999999999999986542 356666654432 24688999999999999999999999999999999
Q ss_pred cCCcCeEEEEEEcCccCC-CceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHH
Q psy8199 109 MHIVQRKYLAMVWGIPKL-NGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQI 187 (965)
Q Consensus 109 ~~~~~K~Y~a~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQI 187 (965)
++.++|+|+|+|.|.+.+ ++.++.++........ .+.. .+++++.|+|+++... .++|+++|+|.|||+|||
T Consensus 76 ~~~v~K~YlAlV~g~~~~~~~~i~~~~~~~~~~~~--~~~~-~~~k~a~t~~~~~~~~----~~~slv~~~~~TGR~HQI 148 (217)
T TIGR01621 76 KRKIEKTYLALSSKKPKKKQGLICGDMEKSRRGSW--KLVN-SQENPAITRFFSASAA----TGLRLFILKPHTGKTHQL 148 (217)
T ss_pred cCCccEEEEEEEeccccCCCCEEeCCcccCCCCCE--EEeC-CCCCceeEEEEEEEEc----CCeEEEEEEeCCCCHHHH
Confidence 999999999999998865 5788877765433322 2222 3678999999999875 678999999999999999
Q ss_pred HHHHHHhCCceecCCCCCcccccccccccccccccccccccc
Q psy8199 188 RVHMQWLGHGIVGDNLYGKKYSKSLIFNRQALHAYKLGLIHP 229 (965)
Q Consensus 188 R~~~~~~g~pi~gD~~~~~~~~~~~~~~~~~Lha~~l~f~~p 229 (965)
|+||+++||||+||++||.... ..+++||++++.|+|+
T Consensus 149 Rvhla~lG~PIlGD~~Yg~~~~----~~~~~Lha~~l~f~~~ 186 (217)
T TIGR01621 149 RVAMKSLGSPILGDPLYGTTDE----SDRGYLHAFALRFDYQ 186 (217)
T ss_pred HHHHHHCCCceeCCcccCCCCC----ccCceeeeeEeEEEEC
Confidence 9999999999999999997421 3678999999999985
No 115
>PRK09234 fbiC FO synthase; Reviewed
Probab=100.00 E-value=6e-38 Score=372.52 Aligned_cols=322 Identities=22% Similarity=0.285 Sum_probs=278.2
Q ss_pred ccCHHHHHHHHHhhhc-ccccHHHHHHhcC---CCchhHHHHHHHHHHHhcCCC-----eEEEe--EeEeeccCCCCCCC
Q psy8199 628 ILNKNEIQHMTSAIFQ-TFNELDEVINLFN---LPFNDLLFRAQKVHRKYFDAN-----EIELA--VLLSIKTGGCTEDC 696 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~-~~~~~~e~l~l~~---~~~~~l~~~a~~~~~~~~~g~-----~~~~~--~~i~~~s~~C~~~C 696 (965)
..+...++++++++.. ...+.+|++.|+. .++.+|+..|+++|++++ |+ .++++ ..|++ ||.|.++|
T Consensus 8 ~~~~~~~~~~l~k~~~g~~ls~eEa~~Ll~~~~~dl~~L~~~A~~vR~~~~-G~~~~~~~Vty~~n~~In~-Tn~C~~~C 85 (843)
T PRK09234 8 TPTASAMRRALRRARDGVTLDVDEAAVLLTARGDDLADLCASAARVRDAGL-GAAGRPGVVTYSRKVFIPL-TRLCRDRC 85 (843)
T ss_pred CCCHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCccHHHHHHHHHHHHHHHc-CCcccCceEEEEeEEEecC-CCCCCCCC
Confidence 4667788888888764 5788899999983 357889999999988888 77 76655 68888 99999999
Q ss_pred CCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCc--------------ccHHHHHHHHHHHHh-
Q psy8199 697 GYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKD--------------RDLDNIENMICEVKK- 761 (965)
Q Consensus 697 ~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~--------------~~~~~~~~~~~~i~~- 761 (965)
.||+|++..+. ..+..+++|||++.++++.+.|++++++++|.+|... ..++++.++++.+++
T Consensus 86 ~YCaF~~~~~~--~~~~~ls~eEIl~~a~~~~~~G~~e~l~t~G~~P~~~~~~~~~~l~~~gy~~~~ey~~~~~~~ik~~ 163 (843)
T PRK09234 86 HYCTFATVPGK--LEAAYLSPDEVLDIARAGAAAGCKEALFTLGDRPEDRWPEAREWLDERGYDSTLDYVRAMAIRVLEE 163 (843)
T ss_pred CcCCCccCCCC--CccccCCHHHHHHHHHHHHHCCCCEEEEecCCCCccccccccccccccccccHHHHHHHHHHHHHHh
Confidence 99999875442 2455599999999999999999999999999877432 147999999999996
Q ss_pred cCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhc------ccCCCCHHHHHHHHHHHHHcCCceeeeEEEec
Q psy8199 762 IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGD------IISTRDYENRLNTLKNVRNVGINICCGGIIGL 834 (965)
Q Consensus 762 ~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~------i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl 834 (965)
.++..+++.|.++.+.++.|+++|++ +.+.+|| ++++|++ +++++.+++|+++++.++++|+++++++|+|+
T Consensus 164 ~gl~p~i~~G~ls~~E~~~Lk~~g~s-~gl~lEt~~~~l~~~~g~~h~~~P~K~~~~RL~ti~~A~~lGi~~tsG~L~Gi 242 (843)
T PRK09234 164 TGLLPHLNPGVMSWSELARLKPVAPS-MGMMLETTSRRLFEEKGGPHYGSPDKDPAVRLRVLEDAGRLSVPFTTGILIGI 242 (843)
T ss_pred cCCCceeeeCCCCHHHHHHHHHhcCc-CCCCHHHHHHHHHHhhcccccCCCCCCHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 68888999999999999999999998 6799999 8888754 45677899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCC---CCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhh
Q psy8199 835 SESRDQRAELIFQLANLNP---YPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETT 911 (965)
Q Consensus 835 ~et~ed~~~~l~~l~~l~~---~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~ 911 (965)
|||.+|+++++..|+++++ ++..+++++|.|.|||||++.++++++++++++|++|++||+. ++||++|+.++.+.
T Consensus 243 GEt~edRve~L~~LR~Lq~~~g~~~evi~~~F~p~~gT~l~~~~~~s~~e~Lr~iAvaRliL~~~-~~Iqa~~~l~g~~~ 321 (843)
T PRK09234 243 GETLAERAESLFAIRKLHREYGHIQEVIVQNFRAKPDTAMAGVPDAGLEELLATIAVARLVLGPK-MRIQAPPNLVSGDE 321 (843)
T ss_pred CCCHHHHHHHHHHHHHhhHhhCCCcEEeecccccCCCCCCCCCCCCCHHHHHHHHHHHHHhCCCC-ceeeCccccCCHHH
Confidence 9999999999999999975 4788999999999999999999999999999999999999887 89999999998888
Q ss_pred HHHHhhcCccEEeeCCccccCCC-------CCChhhHHHHHHcCCCcchhhh
Q psy8199 912 QAFCFLAGANSIFYGDKLLTTDN-------TKTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 912 ~~~~l~~Gan~~~~g~~~~t~~~-------~~~~~~~~~~~~~g~~~~~~~~ 956 (965)
.+.+|.+|||+ +.|.+.+|.+. .+.++..++++++|+.|.+|+.
T Consensus 322 ~~~~L~~GanD-~GG~~~~~~d~~~p~~~~~~~~~l~~~~~~aG~~~~eR~t 372 (843)
T PRK09234 322 CAALLGAGIDD-WGGVSPLTPDHVNPERPWPQLDELAAVTAEAGFTLVERLT 372 (843)
T ss_pred HHHHHhcCCCc-ccchhhhHhhccCccCCCCCHHHHHHHHHHcCCCcccccC
Confidence 89999999998 45554444432 2468899999999999998874
No 116
>cd02557 PseudoU_synth_ScRIB2 PseudoU_synth_ScRIB2_like: Pseudouridine synthase, Saccharomyces cerevisiae RIB2_like. This group is comprised of eukaryotic and bacterial proteins similar to Saccharomyces cerevisiae RIB2, S. cerevisiae Pus6p and human hRPUDSD2. S. cerevisiae RIB2 displays two distinct catalytic activities. The N-terminal domain of RIB2 is RNA:psi-synthase which makes psi32 on cytoplasmic tRNAs. Psi32 is highly phylogenetically conserved. The C-terminal domain of RIB2 has a DRAP deaminase activity which catalyses the formation of 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione 5'-phosphate from 2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate during riboflavin biosynthesis. S. cerevisiae Pus6p makes the psi31 of cytoplasmic and mitochondrial tRNAs.
Probab=100.00 E-value=1.7e-38 Score=323.91 Aligned_cols=186 Identities=31% Similarity=0.427 Sum_probs=156.3
Q ss_pred CCccEEEecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHH
Q psy8199 27 IKLDIIYEDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQ 106 (965)
Q Consensus 27 ~~~~i~~e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~ 106 (965)
..++|+|||++|+|+|||+|++|+++......++.+.+...+. ...+.+|||||++||||||||||++++++|+++
T Consensus 14 ~~~~iiyed~~~ivvnKP~Gl~~~~~~~~~~~sl~~~l~~~~~----~~~~~~vhRLD~~TSGllllak~~~~~~~l~~~ 89 (213)
T cd02557 14 DPIKIVHEDDDLLVVDKPSGIPVHPTGRYRYNTVTEILKSEYG----LTELRPCHRLDRLTSGLLLFAKTSQTASRLQQQ 89 (213)
T ss_pred CCCcEEEECCCEEEEECCCCCcCCCCCCCCcChHHHHHHHHcC----CCCccCccCCCCCCceEEEEECCHHHHHHHHHH
Confidence 4678999999999999999999998766556788888876553 136789999999999999999999999999999
Q ss_pred HHcCCcCeEEEEEEcCccCC-CceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCccc
Q psy8199 107 LKMHIVQRKYLAMVWGIPKL-NGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTH 185 (965)
Q Consensus 107 ~~~~~~~K~Y~a~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~h 185 (965)
|++++++|+|+|+|.|.+++ .+.++.++..+..... .......+++++.|.|+++... +..+.|+++|+|.|||+|
T Consensus 90 f~~~~v~K~Y~a~v~G~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~a~t~~~~~~~~--~~~~~slv~v~~~TGR~H 166 (213)
T cd02557 90 IRSREVKKEYLARVKGEFPDGEVVVDQPIGLVSPKGG-LRNDVDEKGKDARTIFKRLSYN--GDLNTSVVLCKPITGRTH 166 (213)
T ss_pred HHcCCccEEEEEEEeCcCCCCCeEEecceeccCcCCc-eeeccCCCCceeeEEEEEEEEc--CCCCeEEEEEEeCCCCHH
Confidence 99999999999999999875 5778888765533211 1122234689999999999874 113789999999999999
Q ss_pred HHHHHHHHhCCceecCCCCCcccccccccccccccccccccc
Q psy8199 186 QIRVHMQWLGHGIVGDNLYGKKYSKSLIFNRQALHAYKLGLI 227 (965)
Q Consensus 186 QIR~~~~~~g~pi~gD~~~~~~~~~~~~~~~~~Lha~~l~f~ 227 (965)
|||+||+++||||+||.+||. .+++||++++.|+
T Consensus 167 QIR~hla~lG~PIlGD~~Yg~--------~~l~Lha~~l~f~ 200 (213)
T cd02557 167 QIRVHLQYLGHPIVNDPIYNN--------LGIYLHALRYEGP 200 (213)
T ss_pred HHHHHHHHCCCCCcCccccCC--------cChhhhhccCcCc
Confidence 999999999999999999996 3579999999996
No 117
>PRK09234 fbiC FO synthase; Reviewed
Probab=100.00 E-value=4.2e-37 Score=365.29 Aligned_cols=321 Identities=16% Similarity=0.212 Sum_probs=262.7
Q ss_pred ccCHHHHHHHHHhhh-cccccHHHHHHhcC---CCchhHHHHHHHHHHHhcCCCeEEE--eEeEeeccCCCCCCCCCCCC
Q psy8199 628 ILNKNEIQHMTSAIF-QTFNELDEVINLFN---LPFNDLLFRAQKVHRKYFDANEIEL--AVLLSIKTGGCTEDCGYCPQ 701 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~-~~~~~~~e~l~l~~---~~~~~l~~~a~~~~~~~~~g~~~~~--~~~i~~~s~~C~~~C~fC~~ 701 (965)
.++.+...-+.++.. ....+.++++.|++ .++.+|+..|+++|++++ |+.+++ +.+||+ ||.|+.+|.||+|
T Consensus 468 ~~~~~v~~~l~~~~~~g~~ls~~eal~Ll~~~~~~l~~L~~~Ad~iR~~~~-G~~Vt~vvn~~In~-TN~C~~~C~FCaf 545 (843)
T PRK09234 468 RIDTDVLAALRAAERDPAGLTDDEALALFTADGPALEAVCRLADDLRRDVV-GDDVTYVVNRNINF-TNICYTGCRFCAF 545 (843)
T ss_pred cccHHHHHHHHHHHhcCCCCCHHHHHHHHcCCchhHHHHHHHHHHHHHHhc-CCeEEEEEeeceec-CCCCCCCCccccc
Confidence 344443333333433 35678999999995 357889999999988887 888764 567888 9999999999999
Q ss_pred CCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--CcEeEE-----------
Q psy8199 702 STHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCL----------- 768 (965)
Q Consensus 702 ~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~--~~~i~~----------- 768 (965)
++. ......|. +++|||++.++++.+.|+++|++++|.++ ..+.++++++++.||+. ++.++.
T Consensus 546 s~~-~~~~~~y~-Ls~eeI~~~a~ea~~~G~tev~i~gG~~p--~~~~~~y~~lir~IK~~~p~i~i~afsp~Ei~~~a~ 621 (843)
T PRK09234 546 AQR-KTDADAYT-LSLDEVADRAWEAWVAGATEVCMQGGIHP--ELPGTGYADLVRAVKARVPSMHVHAFSPMEIVNGAA 621 (843)
T ss_pred ccC-CCCCCccc-CCHHHHHHHHHHHHHCCCCEEEEecCCCC--CcCHHHHHHHHHHHHHhCCCeeEEecChHHHHHHHH
Confidence 985 33445666 89999999999999999999999988766 46789999999999985 455532
Q ss_pred ecCCCCHHHHHHHHHhCCCeEeccCCC--CHHHHhcccCCC-CHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHH
Q psy8199 769 TLGMLNENQAYRLKKVGLDYYNHNLDT--SPKLYGDIISTR-DYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELI 845 (965)
Q Consensus 769 ~~~~~~~e~l~~Lk~aG~~~i~i~~es--~~~~~~~i~~~~-~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l 845 (965)
+.|...+|.+++||+||++++..+-.. ++++.+.+++++ +.++|+++++.+|++||++++++|||++||.+|+++++
T Consensus 622 ~~Gl~~~e~l~~LkeAGLds~pgt~aeil~d~vr~~i~p~k~~~~~wle~i~~Ah~lGi~~~stmm~G~~Et~edrv~hl 701 (843)
T PRK09234 622 RLGLSIREWLTALREAGLDTIPGTAAEILDDEVRWVLTKGKLPTAEWIEVVTTAHEVGLRSSSTMMYGHVDTPRHWVAHL 701 (843)
T ss_pred HcCCCHHHHHHHHHHhCcCccCCCchhhCCHHHHhhcCCCCCCHHHHHHHHHHHHHcCCCcccceEEcCCCCHHHHHHHH
Confidence 457889999999999999999875444 678888888744 89999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCceeeccccc----cCCCCCC----CCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhh
Q psy8199 846 FQLANLNPYPESVPINNLVQ----IKGTPLY----GSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFL 917 (965)
Q Consensus 846 ~~l~~l~~~~~~i~~~~~~P----~~gT~l~----~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~ 917 (965)
..|++++ .+...+..|+| +++||++ ..++++..++++++|++|++||+..++++++|..++.+.++.+|.
T Consensus 702 ~~LreLq--~~tgGf~~fIPl~F~~~~tpl~l~~~~~~~~t~~e~Lr~iAvaRl~Lp~~i~~Iqa~wv~lg~~~~q~~L~ 779 (843)
T PRK09234 702 RVLRDIQ--DRTGGFTEFVPLPFVHQNAPLYLAGAARPGPTHRENRAVHALARIMLHGRIDNIQTSWVKLGVEGTRAMLR 779 (843)
T ss_pred HHHHhcC--cccCCeeeeeeccccCCCCCcccccCCCCCCCHHHHHHHHHHHHHhCCCCcccccchhhhcCHHHHHHHHh
Confidence 9999999 55444444554 5688884 246689999999999999999987789999999999988899999
Q ss_pred cCccE---EeeCCccccCCC------CCChhhHHHHHHcCCCcchhhh
Q psy8199 918 AGANS---IFYGDKLLTTDN------TKTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 918 ~Gan~---~~~g~~~~t~~~------~~~~~~~~~~~~~g~~~~~~~~ 956 (965)
+|||+ ++.+|++....| .++++...+++++|+.|.+|+.
T Consensus 780 ~GaNDlgGtl~ee~i~~~aG~~~~~~~~~~~l~~~i~~aG~~p~~R~t 827 (843)
T PRK09234 780 GGANDLGGTLMEETISRMAGSEHGSAKTVAELEAIAEGAGRPARQRTT 827 (843)
T ss_pred cCCcCcccccccceeeeccCCCCCCCCCHHHHHHHHHHcCCCeeeecC
Confidence 99996 445566653333 3568999999999999999875
No 118
>TIGR03550 F420_cofG 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit. This model represents either a subunit or a domain, depending on whether or not the genes are fused, of a bifunctional protein that completes the synthesis of 7,8-didemethyl-8-hydroxy-5-deazariboflavin, or FO. FO is the chromophore of coenzyme F(420), involved in methanogenesis in methanogenic archaea but found in certain other lineages as well. The chromophore also occurs as a cofactor in DNA photolyases in Cyanobacteria.
Probab=100.00 E-value=1.1e-36 Score=331.19 Aligned_cols=272 Identities=21% Similarity=0.316 Sum_probs=230.3
Q ss_pred EEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCc------------
Q psy8199 679 IELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKD------------ 746 (965)
Q Consensus 679 ~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~------------ 746 (965)
+..+..|++ ||+|+++|.||+|++..+ ...++.+++|+|+++++++.+.|++++++++|.+|...
T Consensus 2 ~~~n~~i~~-tn~C~~~C~fCaf~~~~g--~~~~~~l~~eeI~~~a~~~~~~G~~ei~l~~G~~p~~~~~~~~~~l~~~~ 78 (322)
T TIGR03550 2 YSRNVFIPL-TRLCRNRCGYCTFRRPPG--ELEAALLSPEEVLEILRKGAAAGCTEALFTFGEKPEERYPEAREWLAEMG 78 (322)
T ss_pred ccceEEecc-ccCcCCCCccCCccccCC--CcccccCCHHHHHHHHHHHHHCCCCEEEEecCCCccccHHHHHHHHHhcC
Confidence 456788899 999999999999987533 33455699999999999999999999999999876332
Q ss_pred --ccHHHHHHHHHHHHh-cCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhccc----CCCCHHHHHHHHHH
Q psy8199 747 --RDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDII----STRDYENRLNTLKN 818 (965)
Q Consensus 747 --~~~~~~~~~~~~i~~-~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~----~~~~~~~~~~~i~~ 818 (965)
...+++.++++.+++ .++..+++.+.++++.++.||++|++ +.+.+|| ++.+++.++ +++++++|+++++.
T Consensus 79 ~~~~~~~~~~~~~~i~~e~~~~~~~~~g~lt~e~l~~Lk~aG~~-~~~~~Et~~~~l~~~~~~~~~p~k~~~~~l~~i~~ 157 (322)
T TIGR03550 79 YDSTLEYLRELCELALEETGLLPHTNPGVMSRDELARLKPVNAS-MGLMLETTSERLCKGEAHYGSPGKDPAVRLETIED 157 (322)
T ss_pred CccHHHHHHHHHHHHHHhcCCccccCCCCCCHHHHHHHHhhCCC-CCcchhhhccccccccccCCCCCCCHHHHHHHHHH
Confidence 124788888888886 47788899999999999999999986 5888999 777665554 34578999999999
Q ss_pred HHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCC---CCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q psy8199 819 VRNVGINICCGGIIGLSESRDQRAELIFQLANLNP---YPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPT 895 (965)
Q Consensus 819 ~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~---~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~ 895 (965)
++++|+++++++|+|+|||.+|+++++..++++++ ++..+++++|.|.||||+++.++.+..++++++|++|+++|+
T Consensus 158 a~~~Gi~~~s~~i~G~gEt~ed~~~~l~~lr~Lq~~~~g~~~~i~~~f~P~~gTpl~~~~~~s~~e~lr~iAv~Rl~l~~ 237 (322)
T TIGR03550 158 AGRLKIPFTTGILIGIGETREERAESLLAIRELHERYGHIQEVIVQNFRAKPGTPMENHPEPSLEEMLRTVAVARLILPP 237 (322)
T ss_pred HHHcCCCccceeeEeCCCCHHHHHHHHHHHHHHHHHcCCCeEEecCccccCCCCCccCCCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999985 356778899999999999998899999999999999999987
Q ss_pred CceeccccccccchhhHHHHhhcCccE-----EeeCCccccCC-CCCChhhHHHHHHcCCCcchhhh
Q psy8199 896 SRIRMSAGRKEMGETTQAFCFLAGANS-----IFYGDKLLTTD-NTKTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 896 ~~i~i~~~~~~~~~~~~~~~l~~Gan~-----~~~g~~~~t~~-~~~~~~~~~~~~~~g~~~~~~~~ 956 (965)
. ++|+++| .++...++.+|.+|||+ .+++++..+.+ ..+++++.++|+++|++|++|+.
T Consensus 238 ~-~~I~~~~-~l~~~~~~~~L~~Gand~~gt~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~p~~R~t 302 (322)
T TIGR03550 238 D-ISIQVPP-NLNREDYRLLLDAGIDDWGGVSPVTPDHVNPEAPWPEIDELARATEEAGFTLKERLP 302 (322)
T ss_pred C-CeeecCC-ccChHHHHHHHhcCCccccCcccCchhhcCCCCCCCCHHHHHHHHHHcCCCcccccC
Confidence 5 7999999 44454688999999998 45577554332 24789999999999999999875
No 119
>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only]
Probab=100.00 E-value=3.4e-36 Score=325.03 Aligned_cols=319 Identities=17% Similarity=0.178 Sum_probs=264.1
Q ss_pred HHHHHHhhhc-ccccHHHHHHhcCC-CchhHHHHHHHHHHHhcC--CCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCc
Q psy8199 634 IQHMTSAIFQ-TFNELDEVINLFNL-PFNDLLFRAQKVHRKYFD--ANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEI 709 (965)
Q Consensus 634 i~~~~~~l~~-~~~~~~e~l~l~~~-~~~~l~~~a~~~~~~~~~--g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~ 709 (965)
++.+++++.. ...+.++++.|++. +...+...|+++|++... +++|.++.+||+ ||.|.++|.||+|++..+ ..
T Consensus 8 ~~~~~e~a~~~~~l~~~d~~~Ll~~~~~~~l~~~A~~~r~~~~~~~~vtyv~n~~in~-TN~C~~~C~fCaF~~~~~-~~ 85 (370)
T COG1060 8 VDEIVEKALNGERLTREDALALLSPADLEELEELADKARRRKRVGDGVTYVVNRNINY-TNICVNDCTFCAFYRKPG-DP 85 (370)
T ss_pred HHHHHHHHhccCCCCHHHHHHHhccCcHHHHHHHHHHHHHhhccCCcEEEEEeecCCc-chhhcCCCCccccccCCC-Cc
Confidence 7777777764 56899999999975 467888999999845443 455788899999 999999999999998753 32
Q ss_pred ccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcEeEE-------------ecCCCCHH
Q psy8199 710 TATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCL-------------TLGMLNEN 776 (965)
Q Consensus 710 ~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~i~~-------------~~~~~~~e 776 (965)
++|. +|+|||.++++++.+.|+++++|++|.+| ...++++.++++.||+..+.+++ ..+...+|
T Consensus 86 ~~y~-Ls~eeI~~~~~~~~~~G~~Evli~gG~~p--~~~~~y~~~~~~~ik~~~p~~~i~a~s~~ei~~~~~~~~~s~~E 162 (370)
T COG1060 86 KAYT-LSPEEILEEVREAVKRGITEVLIVGGEHP--ELSLEYYEELFRTIKEEFPDLHIHALSAGEILFLAREGGLSYEE 162 (370)
T ss_pred cccc-cCHHHHHHHHHHHHHcCCeEEEEecCcCC--CcchHHHHHHHHHHHHhCcchhhcccCHHHhHHHHhccCCCHHH
Confidence 4444 99999999999999999999999999988 55678999999999974444432 34566777
Q ss_pred HHHHHHHhCCCeEeccCCC-CHHHH-hcccC-CCCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCC
Q psy8199 777 QAYRLKKVGLDYYNHNLDT-SPKLY-GDIIS-TRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNP 853 (965)
Q Consensus 777 ~l~~Lk~aG~~~i~i~~es-~~~~~-~~i~~-~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~ 853 (965)
++++||+||++.+..+..+ ..+.+ +.+++ +.+++.|+++++.|+++||+.++++++|++|+.+|+++++..++++|+
T Consensus 163 ~l~~Lk~aGldsmpg~~aeil~e~vr~~~~p~K~~~~~wle~~~~Ah~lGI~~tatml~Gh~E~~ed~~~hl~~ir~lQ~ 242 (370)
T COG1060 163 VLKRLKEAGLDSMPGGGAEILSEEVRKIHCPPKKSPEEWLEIHERAHRLGIPTTATMLLGHVETREDRIDHLEHIRDLQD 242 (370)
T ss_pred HHHHHHHcCCCcCcCcceeechHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCccceeEEEecCCHHHHHHHHHHHHHHHH
Confidence 7999999999999999888 54444 44554 458999999999999999999999999999999999999999999987
Q ss_pred ---CCCceeeccccccCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEee---C
Q psy8199 854 ---YPESVPINNLVQIKGT-PLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFY---G 926 (965)
Q Consensus 854 ---~~~~i~~~~~~P~~gT-~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~---g 926 (965)
++..+.+.+|.|.+++ ++...++.+..++++++|++|+++++..-+++++|...+....+.++.+|||++-. +
T Consensus 243 ~~gg~~~fI~~~f~p~~~~~~~~~~~~~~~~~~l~~iAiaRi~l~~~i~~~~a~w~~~g~~~~~~~l~~GanD~ggt~~~ 322 (370)
T COG1060 243 ETGGFQEFIPLRFRPENGPLPAEVVPEASLEQDLKAIALARIFLDNNISNIQASWLRDGVILAQAALLSGANDLGGTGYE 322 (370)
T ss_pred HhCCcEEEEcccccCCCCCccccCCCCCCHHHHHHHHHHHHHHccCccccccCcccccchHHHHHHHHhCcccCcCCCcc
Confidence 4566666778888877 67777888999999999999999998766799999999988899999999997543 3
Q ss_pred CccccCCC------CCChhhHHHHHHcCCCcchhhhH
Q psy8199 927 DKLLTTDN------TKTNDDSKLLKKLGINTRNIKIK 957 (965)
Q Consensus 927 ~~~~t~~~------~~~~~~~~~~~~~g~~~~~~~~~ 957 (965)
|++....+ .++++..++++++|+.|+.|+.-
T Consensus 323 E~v~~~a~~~~~~~~~~eel~~~i~~aG~~p~~Rdt~ 359 (370)
T COG1060 323 EKVNPAAGAFSGDWRSVEELAALIKEAGRIPVERDTL 359 (370)
T ss_pred cccccccccccCCCCCHHHHHHHHHHcCCCeeeeccc
Confidence 44443333 46789999999999999998753
No 120
>TIGR00423 radical SAM domain protein, CofH subfamily. This protein family includes the CofH protein of coenzyme F(420) biosynthesis from Methanocaldococcus jannaschii, but appears to hit genomes more broadly than just the subset that make coenzyme F(420), so that narrower group is being built as a separate family.
Probab=100.00 E-value=3.3e-36 Score=326.74 Aligned_cols=271 Identities=18% Similarity=0.303 Sum_probs=229.9
Q ss_pred eEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHH
Q psy8199 678 EIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMIC 757 (965)
Q Consensus 678 ~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~ 757 (965)
+|..+..|++ ||+|+++|.||++++.++.. +.| .+++|+|+++++++.+.|+++|+|++|.++ ..+.++++++++
T Consensus 2 ~~~~n~~i~~-T~~C~~~C~FC~~~~~~~~~-~~~-~ls~eeI~~~~~~~~~~G~~~i~l~gg~~~--~~~~~~~~~i~~ 76 (309)
T TIGR00423 2 TFVVNRNINF-TNICVGKCKFCAFRAREKDK-DAY-VLSLEEILEKVKEAVAKGATEVCIQGGLNP--QLDIEYYEELFR 76 (309)
T ss_pred EEeceeeecC-ccccccCCccCCCccCCCCC-Ccc-cCCHHHHHHHHHHHHHCCCCEEEEecCCCC--CCCHHHHHHHHH
Confidence 4667788998 99999999999998754322 234 599999999999999999999999987655 356889999999
Q ss_pred HHHhcC--cEeEE-----------ecCCCCHHHHHHHHHhCCCeEe-ccCCC-CHHHHhcccCC-CCHHHHHHHHHHHHH
Q psy8199 758 EVKKIG--LETCL-----------TLGMLNENQAYRLKKVGLDYYN-HNLDT-SPKLYGDIIST-RDYENRLNTLKNVRN 821 (965)
Q Consensus 758 ~i~~~~--~~i~~-----------~~~~~~~e~l~~Lk~aG~~~i~-i~~es-~~~~~~~i~~~-~~~~~~~~~i~~~~~ 821 (965)
.|++.. +.++. +.|..+++.+++||+||++++. .+.|+ +++++++++++ .++++|+++++.+++
T Consensus 77 ~Ik~~~~~i~~~~~s~~e~~~~~~~~g~~~~e~l~~LkeAGl~~i~~~g~E~l~~~~~~~i~~~~~t~~~~l~~i~~a~~ 156 (309)
T TIGR00423 77 AIKQEFPDVHIHAFSPMEVYFLAKNEGLSIEEVLKRLKKAGLDSMPGTGAEILDDSVRRKICPNKLSSDEWLEVIKTAHR 156 (309)
T ss_pred HHHHHCCCceEEecCHHHHHHHHHHcCCCHHHHHHHHHHcCCCcCCCCcchhcCHHHHHhhCCCCCCHHHHHHHHHHHHH
Confidence 999854 44431 3566789999999999999996 69999 89999999875 499999999999999
Q ss_pred cCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccc----cCCCC-CCCC--CCCCHHHHHHHHHHHHHHCC
Q psy8199 822 VGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ----IKGTP-LYGS--SILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 822 ~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P----~~gT~-l~~~--~~~~~~~~~~~ia~~R~~lp 894 (965)
+|+++++++|+|+|||.||+++++..+++++ .+...++.|+| .+||| ++.. +++++.+.+|++|++|+++|
T Consensus 157 ~Gi~~~s~~iiG~~Et~ed~~~~l~~lr~l~--~~~~~f~~fiP~~f~~~~t~~l~~~~~~~~~~~e~lr~iA~~Rl~lp 234 (309)
T TIGR00423 157 LGIPTTATMMFGHVENPEHRVEHLLRIRKIQ--EKTGGFTEFIPLPFQPENNPYLEGEVRKGASGIDDLKVIAISRILLN 234 (309)
T ss_pred cCCCceeeEEecCCCCHHHHHHHHHHHHhhc--hhhCCeeeEEeeeecCCCChhhccCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999 67666666666 36899 8765 77899999999999999999
Q ss_pred CCceeccccccccchhhHHHHhhcCccE---EeeCCccccCC------CCCChhhHHHHHHcCCCcchhhh
Q psy8199 895 TSRIRMSAGRKEMGETTQAFCFLAGANS---IFYGDKLLTTD------NTKTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 895 ~~~i~i~~~~~~~~~~~~~~~l~~Gan~---~~~g~~~~t~~------~~~~~~~~~~~~~~g~~~~~~~~ 956 (965)
+ .++++++|..++.+.++.+|.+|||+ ++..|++.... ..++++..++++++|++|++|+.
T Consensus 235 ~-~~~i~a~~~~l~~~~~~~~l~~Gand~~gt~~~e~v~~~ag~~~~~~~~~~~l~~~~~~~g~~~~~r~~ 304 (309)
T TIGR00423 235 N-IRNIQASWVKLGLKLAQVALEFGANDLGGTLMEENISKAAGAKSGVGLTVEELIEAIKDAGRVPAQRDT 304 (309)
T ss_pred C-CccceecchhcCHHHHHHHHhCCCccCCcccccceeccccCCCCCCCCCHHHHHHHHHHcCCCeeecCC
Confidence 5 48899999999888889999999995 44557665443 33678999999999999999874
No 121
>PRK06267 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=324.44 Aligned_cols=275 Identities=18% Similarity=0.296 Sum_probs=234.6
Q ss_pred CCchhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCC--CCCCCCCCCCcCCC-CcccccCCCHHHHHHHHHHHHHCCCC
Q psy8199 657 LPFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCT--EDCGYCPQSTHYNT-EITATKILSIESVITAAQKAKSDGAT 733 (965)
Q Consensus 657 ~~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~--~~C~fC~~~~~~~~-~~~~~~~~~~eei~~~~~~~~~~g~~ 733 (965)
.++.+|+..|+++|+++| |+++.+++++++ ||+|+ ++|.||+++...+. ....++.+++|+|+++++.+.+.|++
T Consensus 4 ~~~~~L~~~A~~ir~~~f-G~~v~l~~~l~~-S~~C~l~~~C~FC~~s~~~~~i~~~~~~~~s~eeI~eea~~~~~~Gv~ 81 (350)
T PRK06267 4 EEILENSIKAFKLTEKHH-GNIVSLERALFL-GWYCNLKGPCKFCYMSTQKDKIKDPLKARRRVESILAEAILMKRIGWK 81 (350)
T ss_pred hHHHHHHHHHHHHHHHHc-CCeEEEEEeeee-cCCCcCCCCCcCCCCcccCCccCccccccCCHHHHHHHHHHHHHcCCC
Confidence 357889999999988888 899999999998 99999 99999999875321 12245568999999999999999999
Q ss_pred EEEEeeccCCCCcccHHHHHHHHHHHHhcCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHH
Q psy8199 734 RFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENR 812 (965)
Q Consensus 734 ~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~ 812 (965)
.+++++|. ++...+++.+++.++.++ +..++++.|.++.+.+..++.+|+ ..++|| +++.++.+++.++++++
T Consensus 82 ~~~lsgG~-~~~~~el~~i~e~I~~~~--~~~~~~s~G~~d~~~~~~~~l~Gv---~g~~ET~~~~~~~~i~~~~s~ed~ 155 (350)
T PRK06267 82 LEFISGGY-GYTTEEINDIAEMIAYIQ--GCKQYLNVGIIDFLNINLNEIEGV---VGAVETVNPKLHREICPGKPLDKI 155 (350)
T ss_pred EEEEecCC-CCCHHHHHHHHHHHHHhh--CCceEeecccCCHHHHhhccccCc---eeeeecCCHHHHHhhCCCCCHHHH
Confidence 77777664 444444455555554443 446788899999998888888876 468999 89999999999999999
Q ss_pred HHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8199 813 LNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARIT 892 (965)
Q Consensus 813 ~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~ 892 (965)
+++++.++++|+++++++|+|+||+.+|+.++++++++++ ++.+++++|+|.||||+++.++++++++++++|++|++
T Consensus 156 ~~~l~~ak~aGi~v~~g~IiGlgEt~ed~~~~l~~l~~l~--~d~v~~~~L~P~pGTp~~~~~~~s~~e~lr~ia~~Rl~ 233 (350)
T PRK06267 156 KEMLLKAKDLGLKTGITIILGLGETEDDIEKLLNLIEELD--LDRITFYSLNPQKGTIFENKPSVTTLEYMNWVSSVRLN 233 (350)
T ss_pred HHHHHHHHHcCCeeeeeEEEeCCCCHHHHHHHHHHHHHcC--CCEEEEEeeeECCCCcCCCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CCCCceeccccccccchhhHHHHhhcCccEE----eeCCccccCCCCCChhhHHHH
Q psy8199 893 MPTSRIRMSAGRKEMGETTQAFCFLAGANSI----FYGDKLLTTDNTKTNDDSKLL 944 (965)
Q Consensus 893 lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~----~~g~~~~t~~~~~~~~~~~~~ 944 (965)
+|+..| ++++|.....+.++ ++.+|||++ +.|+ |+|+.|+++++|+.+-
T Consensus 234 lP~~~I-~~~~~~~~l~~~~~-~~~aGaN~i~~~p~~g~-ylt~~g~~~~~~~~~~ 286 (350)
T PRK06267 234 FPKIKI-ITGTWVDKLTNIGP-LIMSGSNVITKFPLFSM-YGTKEGKRVENEIRWT 286 (350)
T ss_pred CCCCCc-chhhHhHhcchhhH-HhhcCcceeeccchhcc-CcccCCCCHHHHHHHh
Confidence 999988 78888655566666 577999999 7888 5688888899888765
No 122
>cd02869 PseudoU_synth_RluCD_like PseudoU_synth_RsuA/RluD: Pseudouridine synthase, RsuA/RluD family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF and TruA. Pseudouridine synthases catalyze the isomerization of specific uridines in a n RNA molecule to pseudouridines (5-ribosyluracil, psi) requiring no cofactors. E. coli RluC for example makes psi955, 2504 and 2580 in 23S RNA. Some psi sites such as psi1917 in 23S RNA made by RluD are universally conserved. Other psi sites occur in a more restricted fashion, for example psi2819 in 21S mitochondrial ribosomal RNA made by S. cerevisiae Pus5p is only found in mitochondrial large subunit rRNAs from some other species and in gram negative bacteria. The E. coli counterpart of this psi residue is psi2580 in 23S rRNA. psi2604in 23S RNA made by RluF has only been detected in E.coli.
Probab=100.00 E-value=8.8e-34 Score=286.67 Aligned_cols=184 Identities=45% Similarity=0.676 Sum_probs=145.7
Q ss_pred EEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEE
Q psy8199 38 IIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYL 117 (965)
Q Consensus 38 ~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~ 117 (965)
|+|+|||+|++|++.......++.+.+............+.+|||||++||||||||+|+++++.|+++|+++.+.|+|+
T Consensus 1 ~lvvnKP~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~RLD~~tsGlll~ak~~~~~~~l~~~~~~~~~~K~Y~ 80 (185)
T cd02869 1 LLVVNKPAGLPVHPGPGHLTGTLVNALLKLLLLLGEEFRPGLVHRLDKDTSGLLLVAKNKKAAAKLSKQFKERKVKKTYL 80 (185)
T ss_pred CEEEECCCCCeeecCCCCCCCCHHHHHHHHHhhcCCCCcCceecccCCCCceEEEEEcCHHHHHHHHHHHhcCceeEEEE
Confidence 68999999999999887666777776532222222345789999999999999999999999999999999999999999
Q ss_pred EEEcCccCCC-ceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCC
Q psy8199 118 AMVWGIPKLN-GMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGH 196 (965)
Q Consensus 118 a~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~ 196 (965)
|+|.|.+..+ +.+..++..+.......... ..+++.+.|+|+++... .++|+++|+|.|||+||||+||+++||
T Consensus 81 a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~t~~~~l~~~----~~~s~~~~~l~tGR~HQIR~hl~~~G~ 155 (185)
T cd02869 81 ALVDGKPPEDEGTIDAPLGRKKRKKRARVVV-SEDGKPAITHYKVLERF----GNVTLVELQLETGRTHQIRVHLASIGH 155 (185)
T ss_pred EEEeCCCCCCccEEecccccCCccCceEEEE-CCCCeEEEEEEEEEEEc----CCcEEEEEEeCcCCccHHHHHHHHCCC
Confidence 9999998754 56665665432222222222 24689999999999874 578999999999999999999999999
Q ss_pred ceecCCCCCccccccccccccccccccccc
Q psy8199 197 GIVGDNLYGKKYSKSLIFNRQALHAYKLGL 226 (965)
Q Consensus 197 pi~gD~~~~~~~~~~~~~~~~~Lha~~l~f 226 (965)
||+||.+||..........+++||++++.|
T Consensus 156 pIvGD~~Yg~~~~~~~~~~~~~Lha~~l~~ 185 (185)
T cd02869 156 PIVGDPKYGGKASDSPGLKRLALHAYRLSF 185 (185)
T ss_pred CEeCccccCCccccccCCcchhhcccEeEC
Confidence 999999999764322123678999998876
No 123
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-32 Score=311.15 Aligned_cols=337 Identities=16% Similarity=0.129 Sum_probs=238.5
Q ss_pred eEEEecCCcccccccccchhccCC-CCCHHHHHHHHHHHhhcc--c-cc-cCCCCcHHHHHHHHHHHhhcCCCCCeEEEc
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFG-HSNSYINKALKNQLNKLE--H-VM-LSNLTHKPVIKLSEKLSSLTQYKLGHCFYG 320 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lG-h~~p~v~~av~~~~~~~~--~-~~-~~~~~~~~~~~la~~l~~~~~~~~~~v~~~ 320 (965)
+|+||.||++||||.+ +.++| |+||+|++|+++|+++.+ + .. .....++...+++++|++.++. +++++
T Consensus 38 ~~~~d~~g~~~ld~~s---~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~~~ 111 (402)
T PRK07505 38 ILITLADGHTFVNFVS---CSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA---SVLTF 111 (402)
T ss_pred ccEEecCCceEEEeec---CCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC---CEEEE
Confidence 8999999999999988 36899 999999999999998753 1 11 1124577889999999999863 77778
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCCh
Q psy8199 321 SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA 400 (965)
Q Consensus 321 ~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (965)
+||++|++.|+++++... .+ .++.++|+++++|||+..... .+... ..++.++|.
T Consensus 112 ~sG~~a~~~ai~~~~~~~-~~--~~~~~vi~~~~~~H~s~~~~~------~~~~~----~~~v~~~~~------------ 166 (402)
T PRK07505 112 TSCSAAHLGILPLLASGH-LT--GGVPPHMVFDKNAHASLNILK------GICAD----ETEVETIDH------------ 166 (402)
T ss_pred CChHHHHHHHHHHHHhcc-cC--CCCCCEEEEchhhhHhHHhhh------hhhhc----CCeEEEeCC------------
Confidence 899999999999876421 01 145679999999999531110 11110 124455554
Q ss_pred hHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccc--cCCCccccccccc
Q psy8199 401 NEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA--VGCGRTGKFFACE 478 (965)
Q Consensus 401 ~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~--tg~gr~G~~~~~~ 478 (965)
+|+++|++++.+ ...++|++|| ++ ++|.+.+ +++|+++|++||++||+||+| +|+|++|.+++.+
T Consensus 167 -----~d~~~l~~~~~~--~~~~~vl~~p-~~-~~G~~~~----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~ 233 (402)
T PRK07505 167 -----NDLDALEDICKT--NKTVAYVADG-VY-SMGGIAP----VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRS 233 (402)
T ss_pred -----CCHHHHHHHHhc--CCCEEEEEec-cc-ccCCcCC----HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHH
Confidence 377888888863 3478999999 65 5566666 899999999999999999998 6789999877778
Q ss_pred ccCC-Cccee----eeccccCCCcccceeee-ecHHHHHhhhccCCcccccccCCCCCC--HHHHHHHHHHHHHHhcccH
Q psy8199 479 HAEI-WPDFL----CLSKGITGGYLPLSLVM-TTDKIYNSIYYKNNINIFLHSHSYSGN--PLACCAALATLEIFNKDNI 550 (965)
Q Consensus 479 ~~~~-~pDiv----t~sK~l~gG~~pig~v~-~~~~i~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~L~~~~~~~~ 550 (965)
+++. .||.+ |+||++++++ |+++ .++++++.+.. +.+..||+++ ++++++++++|+.+.++.+
T Consensus 234 ~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~------~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~ 304 (402)
T PRK07505 234 ELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILR------YAGPLAFSQSLNVAALGAILASAEIHLSEEL 304 (402)
T ss_pred HcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHH------hCCCceeCCCCCHHHHHHHHHHHHHHhccCc
Confidence 8887 67754 7999987642 5555 47788887765 3455667655 5899999999987665544
Q ss_pred HHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------C-CEEE
Q psy8199 551 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------G-NTVY 622 (965)
Q Consensus 551 ~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~-~~lR 622 (965)
.+... ++++.++.+... ....+++.++++..... .+ ...+..+.+.|.++||++++. + +++|
T Consensus 305 ~~~~~----~l~~~~~~~~~~-~~~~~~g~~~~i~~~~~-~~----~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lR 374 (402)
T PRK07505 305 DQLQQ----KLQNNIALFDSL-IPTEQSGSFLPIRLIYI-GD----EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLR 374 (402)
T ss_pred HHHHH----HHHHHHHHHHHH-HHhcCCCCCCCEEEEEe-CC----HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEE
Confidence 43322 233333222110 01123555555433221 11 122456888999999999863 2 5899
Q ss_pred EeCCcccCHHHHHHHHHhhhccc
Q psy8199 623 LMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 623 ~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
|+|++.+++++++++++++.+.+
T Consensus 375 i~~~~~~t~eei~~~~~~l~~~l 397 (402)
T PRK07505 375 IMFRASHTNDEIKRLCSLLKEIL 397 (402)
T ss_pred EecCccCCHHHHHHHHHHHHHHH
Confidence 99999999999999999987643
No 124
>PRK06245 cofG FO synthase subunit 1; Reviewed
Probab=100.00 E-value=9.6e-32 Score=296.43 Aligned_cols=273 Identities=22% Similarity=0.324 Sum_probs=224.7
Q ss_pred CCe--EEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCccc-----
Q psy8199 676 ANE--IELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRD----- 748 (965)
Q Consensus 676 g~~--~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~----- 748 (965)
|+. +..+..+++ ||+|+.+|.||++++..+. .+.+++|+|+++++++.+.|+++++|++|..+....+
T Consensus 5 ~~~vt~~~~~~i~~-Tn~C~~~C~fC~~~~~~~~----~~~ls~eei~~~~~~~~~~G~~ei~l~gG~~p~~~~~~~~~~ 79 (336)
T PRK06245 5 SKIVTYSRNVFIPL-TYECRNRCGYCTFRRDPGQ----PSLLSPEEVKEILRRGADAGCTEALFTFGEVPDESYERIKEQ 79 (336)
T ss_pred CCeeEeecceeeec-cccccCCCccCCCcCCCCc----cCcCCHHHHHHHHHHHHHCCCCEEEEecCCCCccchhhhhhh
Confidence 544 455688899 9999999999998864322 2368999999999999999999999999987533311
Q ss_pred -----HHHHHHHHHHHH----hcCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcc---cCCCCHHHHHHH
Q psy8199 749 -----LDNIENMICEVK----KIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDI---ISTRDYENRLNT 815 (965)
Q Consensus 749 -----~~~~~~~~~~i~----~~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i---~~~~~~~~~~~~ 815 (965)
...+.+.++++. +.++..+++++.++++.++.|+++|++ +.+.+|| ++.+++.+ ++.+++++++++
T Consensus 80 ~~~~g~~~~~~~i~~i~~~~~~~g~~~~~~~~~lt~e~i~~Lk~ag~~-l~~~~et~~e~l~~~v~~~~~~~~~~~~l~~ 158 (336)
T PRK06245 80 LAEMGYSSILEYLYDLCELALEEGLLPHTNAGILTREEMEKLKEVNAS-MGLMLEQTSPRLLNTVHRGSPGKDPELRLET 158 (336)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhcCCCccccCCCCCHHHHHHHHHhCCC-CCCCccccchhhHHhhccCCCCCCHHHHHHH
Confidence 133445554443 345666789999999999999999865 5777899 88888555 667789999999
Q ss_pred HHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCC---CCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8199 816 LKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNP---YPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARIT 892 (965)
Q Consensus 816 i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~---~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~ 892 (965)
++.++++|+++++++|+|++||.+|+.++++.+++++. ++..+++++|+|.+|||+...++++.++++++++++|++
T Consensus 159 i~~a~~~Gi~~~~~~i~G~gEt~ed~~~~l~~l~~l~~~~gg~~~~~~~~f~P~~~T~~~~~~~~s~~e~l~~ia~~Rl~ 238 (336)
T PRK06245 159 IENAGKLKIPFTTGILIGIGETWEDRAESLEAIAELHERYGHIQEVIIQNFSPKPGIPMENHPEPSLEEMLRVVALARLI 238 (336)
T ss_pred HHHHHHcCCceeeeeeeECCCCHHHHHHHHHHHHHHHHhhCCCcEEecCCCcCCCCCCcccCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999974 257788999999999999888888999999999999999
Q ss_pred CCCCceeccccccccchhhHHHHhhcCccEE-----eeCCccccCC-CCCChhhHHHHHHcCCCcchhhh
Q psy8199 893 MPTSRIRMSAGRKEMGETTQAFCFLAGANSI-----FYGDKLLTTD-NTKTNDDSKLLKKLGINTRNIKI 956 (965)
Q Consensus 893 lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~-----~~g~~~~t~~-~~~~~~~~~~~~~~g~~~~~~~~ 956 (965)
+|+. ++++++| .++.+.++.+|.+|||++ ..|+++.+.. +.+++++.++++++|++|++|+.
T Consensus 239 l~~~-i~i~~~~-~~~~~~~~~~L~~Gand~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~r~~ 306 (336)
T PRK06245 239 LPPD-ISIQVPP-NLNRDTGLLLLDAGADDLGGISPVTKDYVNPEYPWPDIEELREILEEAGWPLKERLP 306 (336)
T ss_pred CCCC-ceEecCC-ccchHHHHHHHhcCCccccCCccCCCceeCCCCCCCCHHHHHHHHHHcCCCcccccC
Confidence 9874 7889887 667777888999999987 5567543321 44789999999999999999875
No 125
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=2e-30 Score=298.03 Aligned_cols=339 Identities=13% Similarity=0.158 Sum_probs=249.7
Q ss_pred eEEEecCCcccccccccchhccCCC-CCHHHHHHHHHHHhhcccc-cc---CCCCcHHHHHHHHHHHhhcCCCCCeEEEc
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV-ML---SNLTHKPVIKLSEKLSSLTQYKLGHCFYG 320 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~av~~~~~~~~~~-~~---~~~~~~~~~~la~~l~~~~~~~~~~v~~~ 320 (965)
+|++ .||++|+||.++.+ +|. +||+|.+|+.+++++++.. +. .+++++...+|+++|++.++ ..+.++|+
T Consensus 102 ~~i~-~~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-~~~~i~~s 176 (481)
T PLN02822 102 PHTI-INGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-TPDSILYS 176 (481)
T ss_pred CeEE-ECCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-CCCEEEEC
Confidence 7888 89999999988754 444 4999999999999985432 21 24678889999999999997 45678888
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCCh
Q psy8199 321 SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA 400 (965)
Q Consensus 321 ~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (965)
+|++ ++.++++.. .++..+|++++.||++...++.+++. .+++++.
T Consensus 177 ~G~~-a~~sai~a~---------~~~gd~Ii~d~~~H~s~~~~~~ls~~------------~~~~~~~------------ 222 (481)
T PLN02822 177 YGLS-TIFSVIPAF---------CKKGDIIVADEGVHWGIQNGLYLSRS------------TIVYFKH------------ 222 (481)
T ss_pred CHHH-HHHHHHHHh---------CCCCCEEEEeCCccHHHHHHHHHcCC------------eEEEECC------------
Confidence 6655 788888755 35667777999999887665555541 2333333
Q ss_pred hHHHHHHHHHHHHHHHhC------CCcE-EEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc--CCCcc
Q psy8199 401 NEIARCAIFDLEILLKKN------HNKI-AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV--GCGRT 471 (965)
Q Consensus 401 ~~~~~~d~~~le~~l~~~------~~~~-aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t--g~gr~ 471 (965)
+|.++++..+++. .+++ ++|++|+ +++++|.+.| |++|+++|++||+++|+||+|+ .+|++
T Consensus 223 -----nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~-i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~ 292 (481)
T PLN02822 223 -----NDMESLRNTLEKLTAENKRKKKLRRYIVVEA-IYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKS 292 (481)
T ss_pred -----CCHHHHHHHHHHHhhhhcccCCCcEEEEEec-CCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCC
Confidence 2444455444321 1234 8999999 9999999988 9999999999999999999998 45666
Q ss_pred cccccccccCC---Ccceee--eccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCC--HHHHHHHHHHHHH
Q psy8199 472 GKFFACEHAEI---WPDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGN--PLACCAALATLEI 544 (965)
Q Consensus 472 G~~~~~~~~~~---~pDivt--~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~L~~ 544 (965)
|.+ .++++++ .||+++ |||+++.. -|++++++++++.+.. ..++++|+++ |..++|++++|+.
T Consensus 293 G~G-~~e~~~v~~~~~dii~~s~sKalg~~---GG~i~g~~~ii~~~~~------~~~~~~fsa~lPp~~~~Aa~~aL~~ 362 (481)
T PLN02822 293 GRG-LSEHFGVPIEKIDIITAAMGHALATE---GGFCTGSARVVDHQRL------SSSGYVFSASLPPYLASAAITAIDV 362 (481)
T ss_pred CCC-hHHHcCCCCCCCeEEEecchhhhhhC---CeEEEcCHHHHHHHHh------cCCceeeccccCHHHHHHHHHHHHH
Confidence 655 5788888 689987 78998731 1578899999998764 3467788876 8899999999998
Q ss_pred Hhc-ccHHHHHHHHHHHHHHHHHcccCCCceeee-eceeEEEEEEEeecCcc--chhhHHHHHHHHHH-HcCcEEeec--
Q psy8199 545 FNK-DNILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPE--QIETFSKKFFVAAL-KNELLLRPI-- 617 (965)
Q Consensus 545 ~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-~g~G~~~~i~~~~~~~~--~~~~~~~~~~~~l~-~~Gi~~~~~-- 617 (965)
+++ ++..++++++++++++.|+++. ++... .+.+.++.+.+...... ........+++.|+ ++||++.+.
T Consensus 363 l~~~~~~~~~l~~~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~ 439 (481)
T PLN02822 363 LEDNPSVLAKLKENIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKR 439 (481)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCC
Confidence 765 5688999999999999998752 33322 24455666666411000 01123456888887 889999864
Q ss_pred --------CCEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 618 --------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 618 --------~~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
...+|++.+..+++++|+++++++.++..
T Consensus 440 ~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~ 476 (481)
T PLN02822 440 STLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAA 476 (481)
T ss_pred CCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 13699998899999999999999876543
No 126
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=2.3e-29 Score=286.95 Aligned_cols=330 Identities=15% Similarity=0.141 Sum_probs=245.8
Q ss_pred CCcccccccccchhccCCC-CCHHHHHHHHHHHhhccccc----cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh-~~p~v~~av~~~~~~~~~~~----~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA 326 (965)
+|+++++|.++ .+||. +||+|++|+.+++++.++.. ...+.++...+|+++|+++++ .++++|++||++|
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--~~~~~~~~SG~~A 117 (406)
T PRK13393 43 GPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--KEAALLFTSGYVS 117 (406)
T ss_pred CCccEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--CCcEEEeCCcHHH
Confidence 46899999886 67998 59999999999998864321 122445678999999999996 4789999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
|+.|++..... .++.+|+++..||+++..++...+. ....++. +
T Consensus 118 n~~ai~~l~~~-------~~g~~I~~~~~~H~s~~~~~~~~g~------------~~~~~~~-----------------~ 161 (406)
T PRK13393 118 NWAALSTLGSR-------LPGCVILSDELNHASMIEGIRHSRA------------EKRIFRH-----------------N 161 (406)
T ss_pred HHHHHHHhhcC-------CCCCEEEEccchhHHHHHHHHHcCC------------eEEEeCC-----------------C
Confidence 99999954221 1345888899999998766654431 1222332 3
Q ss_pred HHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc-CC-CcccccccccccCCC
Q psy8199 407 AIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GC-GRTGKFFACEHAEIW 483 (965)
Q Consensus 407 d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~-gr~G~~~~~~~~~~~ 483 (965)
|++++++.++.. ++++++|++|+ +++++|.+.| +++|+++|++||+++|+||+|+ |+ |++|..+ .++.++.
T Consensus 162 d~~~l~~~l~~~~~~~~~~v~~~~-v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~ 235 (406)
T PRK13393 162 DPADLERKLSDLDPHRPKLVAFES-VYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLA 235 (406)
T ss_pred CHHHHHHHHHhccCCCCEEEEEcC-CCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCC
Confidence 566777777643 23578999999 9999999988 9999999999999999999997 66 7777654 3666664
Q ss_pred --ccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhccc-HHHHHHHHH
Q psy8199 484 --PDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN-ILQRISQDM 558 (965)
Q Consensus 484 --pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~-~~~~~~~~~ 558 (965)
+|++ ||||+++. +-|++++++++++.+... ..+ +..|++.+|++++++.++|+.+++.. ..+++++++
T Consensus 236 ~~~~i~~~tlsKa~g~---~GG~~~~~~~~~~~l~~~--~~~--~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~ 308 (406)
T PRK13393 236 DRLTIIEGTLAKAFGV---MGGYITGSAALCDFIRSF--ASG--FIFTTSLPPAVAAGALASVRHLKASSAERERHQDRV 308 (406)
T ss_pred CCCeEEEEeCchhhcc---cCceeeCCHHHHHHHHHh--CcC--ceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 5777 89999874 115678889988887651 111 12466789999999999999876442 345567888
Q ss_pred HHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHH-cCcEEeec-------C-CEEEEeCCccc
Q psy8199 559 KKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-------G-NTVYLMPPYIL 629 (965)
Q Consensus 559 ~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-------~-~~lR~~p~~~~ 629 (965)
+++++.|+++ ++..+++.|.|+.+.+. + ...+..+.+.|++ +||++.+. + +.+||+|++.+
T Consensus 309 ~~l~~~L~~~----g~~~~~~~~~i~~v~~~--~----~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~ 378 (406)
T PRK13393 309 ARLRARLDKA----GIPHLPNPSHIVPVMVG--D----PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLH 378 (406)
T ss_pred HHHHHHHHHc----CCCcCCCCCCeEEEEeC--C----HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCC
Confidence 8999998765 23345678888877553 2 1224567788887 59998752 2 68999999999
Q ss_pred CHHHHHHHHHhhhccc
Q psy8199 630 NKNEIQHMTSAIFQTF 645 (965)
Q Consensus 630 t~~~i~~~~~~l~~~~ 645 (965)
++++++++++++.+..
T Consensus 379 t~edid~l~~~l~~~~ 394 (406)
T PRK13393 379 TDADIEHLVQALSEIW 394 (406)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999887654
No 127
>cd02550 PseudoU_synth_Rsu_Rlu_like PseudoU_synth_Rsu_Rlu: Pseudouridine synthase, Rsu/Rlu family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF and TruA. Pseudouridine synthases catalyze the isomerization of specific uridines in a n RNA molecule to pseudouridines (5-ribosyluracil, psi) requiring no cofactors. E. coli RluC for example makes psi955, 2504 and 2580 in 23S RNA. Some psi sites such as psi1917 in 23S RNA made by RluD are universally conserved. Other psi sites occur in a more restricted fashion, for example psi2819 in 21S mitochondrial ribosomal RNA made by S. cerevisiae Pus5p is only found in mitochondrial large subunit rRNAs from some other species and in gram negative bacteria. The E. coli counterpart of this psi residue is psi2580 in 23S rRNA. psi2604in 23S RNA made by RluF has only been detected in E.coli.
Probab=99.97 E-value=1.4e-30 Score=252.45 Aligned_cols=148 Identities=30% Similarity=0.415 Sum_probs=120.5
Q ss_pred EEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEE
Q psy8199 38 IIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYL 117 (965)
Q Consensus 38 ~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~ 117 (965)
|+|+|||+|++|+++++....++.+.+.... .+++++|||||++||||||||||++++++|+++ +++++|+|+
T Consensus 1 ~ivvnKP~G~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~vhRLD~~TSGlll~ak~~~~~~~l~~~--~~~v~K~Y~ 73 (154)
T cd02550 1 ILVLNKPSGLVCHPTDRDRDPTVVVRLDKLH-----GPRVHAAGRLDKDTSGLLLLTNDGRLQRRLTEP--RREIEKEYL 73 (154)
T ss_pred CEEEECCCCCEEecCCCCCCCcHHHhhhccc-----CCceeEeccCCCCCeeEEEEEcCHHHHHHHhhh--hccCcEEEE
Confidence 6899999999999987765667777664332 246889999999999999999999999999996 888999999
Q ss_pred EEEcCccCCCceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCCc
Q psy8199 118 AMVWGIPKLNGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGHG 197 (965)
Q Consensus 118 a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~p 197 (965)
|+|.|.+++++.+..++.. ......... .+++.+.|.|+++... .++++++++|.|||+||||+||+++|||
T Consensus 74 a~v~g~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~t~~~~l~~~----~~~sll~~~l~tGR~HQIR~hla~~G~p 145 (154)
T cd02550 74 VTVRGELDEEGIEDLATVR--RGRLSGLVD--EGVPLAVTKVRVIGEH----GGTGRLRLTLKTGRTHQIRRHCAAVGFP 145 (154)
T ss_pred EEEEeecCcchheeccccc--cCcceeEEc--CCCcccceEEEEEEec----CCcEEEEEEEcCCCcHHHHHHHHHcCCc
Confidence 9999998876665555443 111122222 3678899999999764 5679999999999999999999999999
Q ss_pred eec
Q psy8199 198 IVG 200 (965)
Q Consensus 198 i~g 200 (965)
|+-
T Consensus 146 I~~ 148 (154)
T cd02550 146 VLR 148 (154)
T ss_pred EEe
Confidence 973
No 128
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=3.7e-28 Score=277.05 Aligned_cols=331 Identities=18% Similarity=0.213 Sum_probs=242.6
Q ss_pred cCCcccccccccchhccCCCC-CHHHHHHHHHHHhhcccccc----CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHVML----SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~~~~~----~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
.+|+++++|.|+ .+||.+ ||+|++|+.+++++.+..+. ..+.++...+|+++++++++ .+.+++++||++
T Consensus 42 ~~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--~~~~l~~~sG~~ 116 (402)
T TIGR01821 42 DGAKDVTVWCSN---DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--KESALVFTSGYV 116 (402)
T ss_pred CCCeeEEEeEcc---CcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--CCeEEEECchHH
Confidence 346999999886 668875 99999999999988643211 12457788999999999996 467888999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||+.|++++... .++.+++.+..||++....+..++.+ ...++.
T Consensus 117 an~~ai~~l~~~-------~~~~~v~~~~~~h~s~~~~~~~~g~~------------~~~~~~----------------- 160 (402)
T TIGR01821 117 ANDATLATLAKI-------IPGCVIFSDELNHASMIEGIRHSGAE------------KFIFRH----------------- 160 (402)
T ss_pred HHHHHHHHhhCC-------CCCCEEEEcchHhHHHHHHHHHcCCe------------EEEECC-----------------
Confidence 999999988642 23567788888999876655444311 111221
Q ss_pred HHHHHHHHHHHhCC-CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc-C-CCcccccccccccCC
Q psy8199 406 CAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-G-CGRTGKFFACEHAEI 482 (965)
Q Consensus 406 ~d~~~le~~l~~~~-~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~~~~~~ 482 (965)
+|+++++++++... +++++|++|+ ++|++|.+.| +++|+++|++||+++|+||+|+ | +|..|.. ..++.++
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~v~~e~-~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g-~~~~~~~ 234 (402)
T TIGR01821 161 NDVAHLEKLLQSVDPNRPKIIAFES-VYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGG-IAERDGL 234 (402)
T ss_pred CCHHHHHHHHHhccCCCCeEEEEcC-CCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCc-cchhccC
Confidence 35677777776443 3578999999 9999999887 9999999999999999999998 3 2444432 2455565
Q ss_pred --Cccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhccc-HHHHHHHH
Q psy8199 483 --WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN-ILQRISQD 557 (965)
Q Consensus 483 --~pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~-~~~~~~~~ 557 (965)
.||++ ||||++++ +-|++++++++++.+... ..+ +.+|.+.+|+++++++++|+.+++.+ +.++..++
T Consensus 235 ~~~~div~~t~sKa~g~---~GG~i~~~~~~~~~l~~~--~~~--~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~ 307 (402)
T TIGR01821 235 MHRIDIIEGTLAKAFGV---VGGYIAASRKLIDAIRSY--APG--FIFTTSLPPAIAAGATASIRHLKESQDLRRAHQEN 307 (402)
T ss_pred CCCCeEEEEechhhhcc---CCceeecCHHHHHHHHHh--CcC--ceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 47887 89999974 125688899998888641 111 22466789999999999999887543 45667788
Q ss_pred HHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------C-CEEEEeCCcc
Q psy8199 558 MKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------G-NTVYLMPPYI 628 (965)
Q Consensus 558 ~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~-~~lR~~p~~~ 628 (965)
++++.+.|+++ ++..+.+.|.++.+.+. + ...+..+.+.|+ ++||++++. + +++|++|++.
T Consensus 308 ~~~l~~~L~~~----g~~~~~~~~~i~~i~~~--~----~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~ 377 (402)
T TIGR01821 308 VKRLKNLLEAL----GIPVIPNPSHIVPVIIG--D----AALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPA 377 (402)
T ss_pred HHHHHHHHHHc----CCCcCCCCCCEEEEEeC--C----HHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCC
Confidence 99999988775 23334456777777553 2 122446778876 459998752 2 5899999999
Q ss_pred cCHHHHHHHHHhhhccc
Q psy8199 629 LNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~~~ 645 (965)
+++++++++++++.+..
T Consensus 378 ~t~edi~~~~~~l~~~~ 394 (402)
T TIGR01821 378 HTDKMIDDLVEALLLVW 394 (402)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999887654
No 129
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.96 E-value=3.3e-28 Score=278.17 Aligned_cols=330 Identities=18% Similarity=0.198 Sum_probs=242.2
Q ss_pred CCcccccccccchhccCCCC-CHHHHHHHHHHHhhccccc---cC-CCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHVM---LS-NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~~~~---~~-~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA 326 (965)
+|++++||.|+ .+||++ ||+|++|+.+++++.++.. .. .++++...+|+++|+++++ .+..++++||++|
T Consensus 44 ~~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g--~~~~~~~~sG~~a 118 (407)
T PRK09064 44 GEREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG--KEAALVFTSGYVS 118 (407)
T ss_pred CCceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC--CCcEEEECcHHHH
Confidence 36999999875 779998 9999999999998864321 11 2357889999999999986 4677888999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
|+.|++++..+ .++.+++.+..+|++....+...+. ....++. +
T Consensus 119 n~~ai~~l~~~-------~~~~~i~~~~~~h~s~~~~~~~~~~------------~~~~~~~-----------------~ 162 (407)
T PRK09064 119 NDATLSTLAKL-------IPDCVIFSDELNHASMIEGIRRSRC------------EKHIFRH-----------------N 162 (407)
T ss_pred HHHHHHHHhCC-------CCCCEEEEeCcchHHHHHHHHHcCC------------cEEEECC-----------------C
Confidence 99999987543 2345677776677765444433321 1112221 3
Q ss_pred HHHHHHHHHHhCC-CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc-C-CCcccccccccccCC-
Q psy8199 407 AIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-G-CGRTGKFFACEHAEI- 482 (965)
Q Consensus 407 d~~~le~~l~~~~-~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~~~~~~- 482 (965)
|+++|+++++... +++++|++|+ +++++|.+.| +++|+++|++||+++|+||+|+ | ||+.|..+ .++.++
T Consensus 163 d~~~le~~l~~~~~~~~~~v~~~~-v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~ 236 (407)
T PRK09064 163 DVAHLEELLAAADPDRPKLIAFES-VYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLM 236 (407)
T ss_pred CHHHHHHHHHhccCCCCeEEEEeC-CCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCC
Confidence 6677888876432 4678999999 9999999887 9999999999999999999997 6 57777654 455665
Q ss_pred -Cccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhccc-HHHHHHHHH
Q psy8199 483 -WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN-ILQRISQDM 558 (965)
Q Consensus 483 -~pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~-~~~~~~~~~ 558 (965)
.||++ ||||+++. +-|++++++++++.+... ..+ +..|.+.+|+++++++++|+.+++.+ ..+++++++
T Consensus 237 ~~~div~~t~sKa~g~---~GG~~~~~~~~~~~l~~~--~~~--~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~ 309 (407)
T PRK09064 237 DRIDIIEGTLAKAFGV---MGGYIAGSAALVDAVRSY--APG--FIFTTSLPPAIAAAALASIRHLKESNEERERHQERA 309 (407)
T ss_pred CCCeEEEEecchhhhc---cCceEecCHHHHHHHHHh--Ccc--ccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 57888 89998863 125688899998877541 111 22456788999999999999887643 457888999
Q ss_pred HHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------C-CEEEEeCCccc
Q psy8199 559 KKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------G-NTVYLMPPYIL 629 (965)
Q Consensus 559 ~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~-~~lR~~p~~~~ 629 (965)
+++.+.|+++ ++..+.+.+.++.+.+. + ...+..+.+.|+ ++||++++. + +++|++|++.+
T Consensus 310 ~~l~~~L~~~----g~~~~~~~~~iv~i~~~--~----~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~ 379 (407)
T PRK09064 310 AKLKAALDAA----GIPVMPNESHIVPVMVG--D----PEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFH 379 (407)
T ss_pred HHHHHHHHHc----CCCCCCCCCCEEEEEeC--C----HHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCC
Confidence 9999999875 23333345667666553 2 122446777776 469999752 2 57999999999
Q ss_pred CHHHHHHHHHhhhccc
Q psy8199 630 NKNEIQHMTSAIFQTF 645 (965)
Q Consensus 630 t~~~i~~~~~~l~~~~ 645 (965)
++++++++++.+.+..
T Consensus 380 t~edi~~l~~~l~~~~ 395 (407)
T PRK09064 380 TDEMIDHLVEALVEVW 395 (407)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999987654
No 130
>KOG1919|consensus
Probab=99.96 E-value=1.3e-28 Score=262.54 Aligned_cols=172 Identities=34% Similarity=0.522 Sum_probs=138.0
Q ss_pred CCccEEEecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHH
Q psy8199 27 IKLDIIYEDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQ 106 (965)
Q Consensus 27 ~~~~i~~e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~ 106 (965)
..+.|+|||++|+|||||+|+++|+.......++...+..... ...+.++||||+.|||||+||++++.+..+.++
T Consensus 104 ~~~~Iv~ed~~~vVvnKP~gipVhp~g~~~~n~i~~~l~~~~~----~~~~~~~hRLDr~tSGllvlAkt~~~~~~~~~~ 179 (371)
T KOG1919|consen 104 LPIRIVFEDKDYVVVNKPHGIPVHPTGRYRENTITKILAALHK----VEGLRPCHRLDRLTSGLLVLAKTKEAADKFHEV 179 (371)
T ss_pred cccceEEecCCEEEEeCCCCCceeccCccccccchHHHHHhcc----ccccccccccCccccceEEEEechhHhHHHHHH
Confidence 5789999999999999999999997766555566666655421 235789999999999999999999999999999
Q ss_pred HHcCCcCeEE-EEEEcCccCCCceEe--eccccCCCCCeeEEEc-cC----CCCcceEEEEEEeEEeeccCCcEEEEEEE
Q psy8199 107 LKMHIVQRKY-LAMVWGIPKLNGMIN--AAIMRNPHNRIKMTVS-KN----FNAKPALTYYERLATGIINKKHISLIRCN 178 (965)
Q Consensus 107 ~~~~~~~K~Y-~a~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~-~~----~~~~~~~t~~~~~~~~~~~~~~~s~~~~~ 178 (965)
|+++.++|.| .+-|.|..+..+.+. .+...... ...+.+. .. ..++.|.|.|+++.++ ...++|++.
T Consensus 180 ~r~~~~~k~Y~v~~v~g~fp~~~~~~i~~~~~~~~~-~~~~~l~~~~~~~~~~~k~a~T~~~~~~~~----~~ss~V~~~ 254 (371)
T KOG1919|consen 180 LRKRTVKKEYVVARVEGPFPVVGEVEIKEPIGEEER-PLRMGLNAVGVRDEVAAKDAKTLFKVLSYD----GGSSLVECR 254 (371)
T ss_pred HhcccceeEEEEEEEeccCCCCceEEeCCCcccccc-ccceEeeecccccccccccceeEEEEcccC----CceEEEEee
Confidence 9999999999 799999877544333 33322221 1112221 11 2479999999999986 889999999
Q ss_pred eCCCcccHHHHHHHHhCCceecCCCCCcc
Q psy8199 179 LKTGRTHQIRVHMQWLGHGIVGDNLYGKK 207 (965)
Q Consensus 179 ~~tGr~hQIR~~~~~~g~pi~gD~~~~~~ 207 (965)
|+|||+||||+||+++|+||+||++|+..
T Consensus 255 PlTGRtHQIRvHlq~lG~PI~gD~~Y~~~ 283 (371)
T KOG1919|consen 255 PLTGRTHQIRVHLQYLGHPIAGDPKYGNH 283 (371)
T ss_pred ccCCcHHHHHHHHHHhCCCcCCCcccccc
Confidence 99999999999999999999999999753
No 131
>cd02556 PseudoU_synth_RluB PseudoU_synth_RluB: Pseudouridine synthase, Escherichia coli RluB like. This group is comprised of bacterial and eukaryotic proteins similar to E. coli RluB. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E.coli RluB makes psi2605 in 23S RNA. psi2605 has been detected in eubacteria but, not in eukarya and archea despite the presence of a precursor U at that site.
Probab=99.96 E-value=6.3e-29 Score=243.13 Aligned_cols=143 Identities=21% Similarity=0.271 Sum_probs=115.3
Q ss_pred cEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEE
Q psy8199 37 EIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKY 116 (965)
Q Consensus 37 ~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y 116 (965)
.|+|+|||+|++|++.+.....++.+.+..+. .+++++|||||++||||||||||++++++|++ ++++++|+|
T Consensus 1 ~~lvvnKP~G~~~~~~~~~~~~tl~~~l~~~~-----~~~~~~V~RLD~~TsGLll~ak~~~~~~~L~~--~~~~i~K~Y 73 (167)
T cd02556 1 RVLIYHKPEGLICTRKDPKGRPTVFDLLPKLG-----IPRWISVGRLDLNTEGLLLFTNDGELANRLMH--PSNEIEREY 73 (167)
T ss_pred CEEEEECCCCcEECccCCCCCccHHHhhhhhc-----cCceEEcCcCCCCCeeEEEEECCHHHHHHHhC--CcCCCCeEE
Confidence 37999999999999866555678888876542 13678999999999999999999999999987 889999999
Q ss_pred EEEEcCccCCCceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCC
Q psy8199 117 LAMVWGIPKLNGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGH 196 (965)
Q Consensus 117 ~a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~ 196 (965)
+|+|.|.++++. +. .+ . . .+.. .+++.+.|+|+++... .++|+++|+|.|||+||||+||+++||
T Consensus 74 ~a~V~g~~~~~~-~~-~~--~--~----gv~~-~~~~~~~~~~~~~~~~----~~~sll~v~l~tGR~HQIR~~~a~~G~ 138 (167)
T cd02556 74 AVRVFGQVTDEQ-LK-SL--K--K----GVEL-EDGFAGFKSIQLEGGE----GKNSWYRVTLREGRNREVRRLWEAFGL 138 (167)
T ss_pred EEEECccCCHHH-HH-HH--H--c----CCEE-CCCcCcceEEEEEecC----CCcEEEEEEEEeCCCHHHHHHHHHcCC
Confidence 999999886543 11 00 0 0 1111 2567888999998653 567999999999999999999999999
Q ss_pred ceecC
Q psy8199 197 GIVGD 201 (965)
Q Consensus 197 pi~gD 201 (965)
||+-=
T Consensus 139 pV~~L 143 (167)
T cd02556 139 QVSRL 143 (167)
T ss_pred eEeEE
Confidence 99853
No 132
>cd02870 PseudoU_synth_RsuA_like Pseudouridine synthases are responsible for the synthesis of pseudouridine from uracil in ribosomal RNA. The RsuA subfamily includes Pseudouridine Synthase similar to Ribosomal small subunit pseudouridine 516 synthase. Most of the proteins in this family are bacterial proteins.
Probab=99.95 E-value=3.7e-29 Score=239.95 Aligned_cols=140 Identities=24% Similarity=0.316 Sum_probs=112.0
Q ss_pred EEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEE
Q psy8199 38 IIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYL 117 (965)
Q Consensus 38 ~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~ 117 (965)
|+|+|||+|++|++.+.....++.+.+... .+++.+|||||++||||||||||++++++|+. +++.++|+|+
T Consensus 1 ~ivvnKP~G~~~~~~~~~~~~~l~~~l~~~------~~~~~~vhRLD~~TsGlll~ak~~~~~~~l~~--~~~~i~K~Y~ 72 (146)
T cd02870 1 YLLLNKPRGVVSTVRDPEGRPTVLDLLKDV------GERLFPVGRLDYDTEGLLLLTNDGELANRLTH--PRYGVEKTYL 72 (146)
T ss_pred CEEEECCCCcEecccCCCCCCEEeeecccc------CCCEEECCCCCCCCeeEEEEeCCHHHHHHhhC--ccCCCCeEEE
Confidence 689999999999987755556666655332 24689999999999999999999999999987 6888999999
Q ss_pred EEEcCccCCCceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCCc
Q psy8199 118 AMVWGIPKLNGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGHG 197 (965)
Q Consensus 118 a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~p 197 (965)
|+|.|.++++.. . .+. . .+.. .+++.+.|+|+++... .+.++++|+|.|||+||||+||+++|||
T Consensus 73 a~v~g~~~~~~~-~-~~~----~----~~~~-~~~~~~~t~~~~l~~~----~~~sll~~~l~tGR~HQIR~hla~~G~p 137 (146)
T cd02870 73 VKVRGVPSEEEL-R-RLR----A----GVEL-DDGKTAPAKVKVLSRD----PKNTLLEVTLHEGRNRQVRRMFEAVGHP 137 (146)
T ss_pred EEECCCCCHHHH-H-HHH----C----CeEe-CCceEcceEEEEeccC----CCCcEEEEEEEeCCcHHHHHHHHHcCCc
Confidence 999998865431 0 010 0 1111 2567889999999754 5679999999999999999999999999
Q ss_pred eec
Q psy8199 198 IVG 200 (965)
Q Consensus 198 i~g 200 (965)
|+.
T Consensus 138 I~~ 140 (146)
T cd02870 138 VLR 140 (146)
T ss_pred CCe
Confidence 973
No 133
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=1.7e-26 Score=250.96 Aligned_cols=327 Identities=19% Similarity=0.211 Sum_probs=256.1
Q ss_pred cCCcccccccccchhccCCCC-CHHHHHHHHHHHhhcccc----ccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~~~----~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
.+|++++||+|+ .+||.+ ||++++|+.+++++.+.. -...+.++...+|+++|++++ +.+.+++.+||..
T Consensus 36 ~~~~~~~nf~SN---dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--g~e~al~f~SGy~ 110 (388)
T COG0156 36 ADGRKVLNFCSN---DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--GAEAALLFSSGFV 110 (388)
T ss_pred cCCceeEeeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--CCCcEEEEcccch
Confidence 349999999987 679986 999999999999884221 123468899999999999999 5789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
||..++... .+++.+|+.|.-.|.+.+.+..+++... .. +.+
T Consensus 111 AN~~~i~~l---------~~~~dli~~D~lnHASiidG~rls~a~~--------------~~---------------f~H 152 (388)
T COG0156 111 ANLGLLSAL---------LKKGDLIFSDELNHASIIDGIRLSRAEV--------------RR---------------FKH 152 (388)
T ss_pred hHHHHHHHh---------cCCCcEEEEechhhhhHHHHHHhCCCcE--------------EE---------------ecC
Confidence 999999877 3668899999999999777777665221 11 122
Q ss_pred HHHHHHHHHHHhCC---CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc--ccccccc
Q psy8199 406 CAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFACEHA 480 (965)
Q Consensus 406 ~d~~~le~~l~~~~---~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~~~~~~ 480 (965)
||+++||+.+++.. .+...|++|. |.++.|.+.| |++|.+||++||++|++||+|+ +|-.|+ .+..+++
T Consensus 153 nD~~~Le~~l~~~~~~~~~~~~Ivteg-VfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~G~~GrG~~e~~ 226 (388)
T COG0156 153 NDLDHLEALLEEARENGARRKLIVTEG-VFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVLGPNGRGLAEHF 226 (388)
T ss_pred CCHHHHHHHHHhhhccCCCceEEEEec-cccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-ccccCCCCccHHHHh
Confidence 78999999998731 1468999999 9999999999 9999999999999999999996 776665 3456788
Q ss_pred CCCcc---ee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHHHHH
Q psy8199 481 EIWPD---FL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRI 554 (965)
Q Consensus 481 ~~~pD---iv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~ 554 (965)
|+.++ ++ ||||++|+-+ |++++++.+.+.+.. ..+++++ |.+-+|..++++.++|+.+++ ++..+++
T Consensus 227 g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~--~ar~~if--StalpP~~aaa~~~al~~l~~~~~~r~~L 299 (388)
T COG0156 227 GLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRN--RARPFIF--STALPPAVAAAALAALRILEEGPERRERL 299 (388)
T ss_pred CCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHH--hCCceec--cCCCCHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 88654 33 8999998622 679999999999987 4566663 445689999999999999975 4678889
Q ss_pred HHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--------CCEEEEeCC
Q psy8199 555 SQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPP 626 (965)
Q Consensus 555 ~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR~~p~ 626 (965)
+++.++++..+... ++........++.+.+. + +..+.++...|+++||++.+. ...+|++|+
T Consensus 300 ~~~~~~~~~~~~~~----~~~~~~s~s~I~pv~~g--d----~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lt 369 (388)
T COG0156 300 QELAAFFRSLLKAL----GLVLLPSESPIIPVILG--D----EERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLT 369 (388)
T ss_pred HHHHHHHHHHHHhc----CCccCCCCCCeeeeEeC--C----HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEec
Confidence 99999998666543 22233445556666664 3 334667888899889998742 268999999
Q ss_pred cccCHHHHHHHHHhhhc
Q psy8199 627 YILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 627 ~~~t~~~i~~~~~~l~~ 643 (965)
..+++++|+.+++.+.+
T Consensus 370 a~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 370 AAHTEEDIDRLAEALSE 386 (388)
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 99999999999988764
No 134
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.95 E-value=7.5e-27 Score=262.97 Aligned_cols=336 Identities=13% Similarity=0.157 Sum_probs=231.3
Q ss_pred ccccccchhccCCCC-CHHHHHHHHHHHhhcccc-c---cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHH
Q psy8199 257 LDAISSWWVNLFGHS-NSYINKALKNQLNKLEHV-M---LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 257 lD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~~~-~---~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al 331 (965)
|||.++ .+||.. ||++++++.+++++.+.. + ...+......+|+++++++++ .+..++.+||+.|+..++
T Consensus 1 ~~f~s~---dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g--~e~al~~~sG~~a~~~~i 75 (392)
T PLN03227 1 LNFATH---DFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG--TESAILYSDGASTTSSTV 75 (392)
T ss_pred CCCcCc---CccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC--CCcEEEecCcHHHHHHHH
Confidence 455553 556664 999999999999874211 1 112345678899999999995 457888888999998888
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
.... .+++.|++.+..| ++......+++ ..+..++..+ ..+++.+
T Consensus 76 ~~l~--------~~GD~Vl~~~~~h-~s~~~~~~l~~------------~~~~~~~~~d--------------~~~l~~~ 120 (392)
T PLN03227 76 AAFA--------KRGDLLVVDRGVN-EALLVGVSLSR------------ANVRWFRHND--------------MKDLRRV 120 (392)
T ss_pred HHhC--------CCCCEEEEecccc-HHHHHHHHHcC------------CeEEEeCCCC--------------HHHHHHH
Confidence 7652 3567777777665 43332222211 1222222210 0233333
Q ss_pred HHHHHhC--------CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc--CCCcccccccccccC
Q psy8199 412 EILLKKN--------HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV--GCGRTGKFFACEHAE 481 (965)
Q Consensus 412 e~~l~~~--------~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t--g~gr~G~~~~~~~~~ 481 (965)
.+.+... ..++..|++|| ++|++|.+.| +++|+++|++||+++|+||+++ .+|++|. ++++++|
T Consensus 121 ~~~i~~~~~a~~~~~~~~t~~vi~E~-v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g 194 (392)
T PLN03227 121 LEQVRAQDVALKRKPTDQRRFLVVEG-LYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAG 194 (392)
T ss_pred HHHhhhhccccccccCCCcEEEEEcC-CcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcC
Confidence 3333211 13578899999 9999999887 9999999999999999999997 3344444 6789999
Q ss_pred CCc----ceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCC--HHHHHHHHHHHHH-HhcccHHHHH
Q psy8199 482 IWP----DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGN--PLACCAALATLEI-FNKDNILQRI 554 (965)
Q Consensus 482 ~~p----Divt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~L~~-~~~~~~~~~~ 554 (965)
+.| |++++|++-+.| +..|++++++++++.+.. ..++.||+++ |+.+++++++++. ++.+++.+++
T Consensus 195 ~~p~~~~Div~~slsk~~g-~~gg~v~~~~~~~~~~~~------~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l 267 (392)
T PLN03227 195 LKPMVHAEIVTFSLENAFG-SVGGMTVGSEEVVDHQRL------SGSGYCFSASAPPFLAKADATATAGELAGPQLLNRL 267 (392)
T ss_pred CCCCCCceEEEeechhhhh-ccCcEEecCHHHHHHHHH------hCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999 999877443333 345677889998877653 3466788876 8788888877755 4556789999
Q ss_pred HHHHHHHHHHHHcccCCCceeeeec--------eeEEEEEEEeecCccch----hhHHHHHHHHHHHcCcEEeecC----
Q psy8199 555 SQDMKKITKALTSLITHPKIINFRQ--------KGMIWAFDVIIEDPEQI----ETFSKKFFVAALKNELLLRPIG---- 618 (965)
Q Consensus 555 ~~~~~~l~~~L~~l~~~~~i~~v~g--------~G~~~~i~~~~~~~~~~----~~~~~~~~~~l~~~Gi~~~~~~---- 618 (965)
++++++|+++|++ ..+|.+.++++ .|.|+.+++. .+..+. ......+.+.|+++|+++.+.+
T Consensus 268 ~~~~~~l~~~L~~-~~~~~~~~~rg~~~~~~~~~~~i~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~ 345 (392)
T PLN03227 268 HDSIANLYSTLTN-SSHPYALKLRNRLVITSDPISPIIYLRLS-DQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVK 345 (392)
T ss_pred HHHHHHHHHHHHh-cCCccccccccccccCCCCCCCEEEEEeC-CHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccC
Confidence 9999999999986 34565666666 3567888885 111110 1123478889999999986422
Q ss_pred --------CEEEEeCCcccCHHHHHHHHHhhhccccc
Q psy8199 619 --------NTVYLMPPYILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 619 --------~~lR~~p~~~~t~~~i~~~~~~l~~~~~~ 647 (965)
..+|++.+..+|+++++++++.+.+++.+
T Consensus 346 ~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 346 KFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred CcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 35677777777999999999999876644
No 135
>PF00849 PseudoU_synth_2: RNA pseudouridylate synthase This Prosite family is a subset of the Pfam family. This Prosite family is a subset of the Pfam family.; InterPro: IPR006145 Pseudouridine synthases catalyse the isomerisation of uridine to pseudouridine (Psi) in a variety of RNA molecules, and may function as RNA chaperones. Pseudouridine is the most abundant modified nucleotide found in all cellular RNAs. There are four distinct families of pseudouridine synthases that share no global sequence similarity, but which do share the same fold of their catalytic domain(s) and uracil-binding site and are descended from a common molecular ancestor. The catalytic domain consists of two subdomains, each of which has an alpha+beta structure that has some similarity to the ferredoxin-like fold (note: some pseudouridine synthases contain additional domains). The active site is the most conserved structural region of the superfamily and is located between the two homologous domains. These families are []: Pseudouridine synthase I, TruA. Pseudouridine synthase II, TruB, which contains and additional C-terminal PUA domain. Pseudouridine synthase RsuA (ribosomal small subunit) and RluC/RluD (ribosomal large subunits), both of which contain an additional N-terminal alpha-L RNA-binding motif. Pseudouridine synthase TruD, which has a natural circular permutation in the catalytic domain, as well as an insertion of a family-specific alpha+beta subdomain. This entry represents several different pseudouridine synthases from family 3, including: RsuA (acts on small ribosomal subunit), RluA, RluB, RluC, RluD, RluE and RluF (act on large ribosomal subunit). RsuA from Escherichia coli catalyses formation of pseudouridine at position 516 in 16S rRNA during assembly of the 30S ribosomal subunit [, ]. RsuA consists of an N-terminal domain connected by an extended linker to the central and C-terminal domains. Uracil and UMP bind in a cleft between the central and C-terminal domains near the catalytic residue Asp 102. The N-terminal domain shows structural similarity to the ribosomal protein S4. Despite only 15% amino acid identity, the other two domains are structurally similar to those of the tRNA-specific psi-synthase TruA, including the position of the catalytic Asp. Our results suggest that all four families of pseudouridine synthases share the same fold of their catalytic domain(s) and uracil-binding site. RluB, RluC, RluD, RluE and RluF are homologous enzymes which each convert specific uridine bases in E. coli ribosomal 23S RNA to pseudouridine: RluB modifies uracil-2605. RluC modifies uracil-955, U-2504, and U-2580. RluD modifies uracil-1911, U-1915, and U-1917. RluE modifies uracil-3457. RluF modifies uracil-2604, and to a lesser extent U-2605. RluD also possesses a second function related to proper assembly of the 50S ribosomal subunit that is independent of Psi-synthesis [, ]. Both RluC and RluD have an N-terminal S4 RNA binding domain. Despite the conserved topology shared by RluC and RluD, the surface shape and charge distribution are very different. ; GO: 0003723 RNA binding, 0009982 pseudouridine synthase activity, 0001522 pseudouridine synthesis, 0009451 RNA modification; PDB: 2GML_A 3DH3_B 1VIO_A 2I82_B 1XPI_B 1V9K_B 1PRZ_A 1V9F_A 2IST_A 1QYU_A ....
Probab=99.95 E-value=1.6e-27 Score=235.59 Aligned_cols=155 Identities=35% Similarity=0.483 Sum_probs=113.2
Q ss_pred cEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEE
Q psy8199 37 EIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKY 116 (965)
Q Consensus 37 ~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y 116 (965)
+|+|+|||+|++|++..+....................+.+++|||||++||||||||+|++++++|+++|+.++++|+|
T Consensus 1 ~~ivvnKP~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~RLD~~TsGlll~a~~~~~~~~l~~~f~~~~~~K~Y 80 (164)
T PF00849_consen 1 NLIVVNKPAGVPVHPSDGNESKSVKELPALSLKRGDDPPELYPVHRLDRDTSGLLLFAKDKEAAAKLSKQFPKRKVEKTY 80 (164)
T ss_dssp SEEEEEE-TTSBSSSSSTBSSSSHHCHHHHHHHHCTTSGGGEESS---TT-EEEEEEESSHHHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCCeEecCCCCCcccccchhhhhhhhccCCCceEECCCCCccccCCeeccCCcccccccccccccCCCcEEE
Confidence 68999999999999887432222222222211112335689999999999999999999999999999999999999999
Q ss_pred EEEEc-CccCCCceEeecccc--CCC-CCeeEEEccCCCCcceEEEEEEeEEe-----eccCCcEEEEEEEeCCCcccHH
Q psy8199 117 LAMVW-GIPKLNGMINAAIMR--NPH-NRIKMTVSKNFNAKPALTYYERLATG-----IINKKHISLIRCNLKTGRTHQI 187 (965)
Q Consensus 117 ~a~v~-g~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~-----~~~~~~~s~~~~~~~tGr~hQI 187 (965)
+|+|. +..+..+.++.++.. ... ...... ...+++.+.|.|+++... .....+.++++|+|.|||+|||
T Consensus 81 ~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~s~v~~~l~tGr~HQI 158 (164)
T PF00849_consen 81 LALVEGGPVEEEGKINSPLGKDVGKNKSSNKDP--PGRDGKPAITRYRVLRSGSRTPSKDENAGCSLVECELITGRTHQI 158 (164)
T ss_dssp EEEECSSSSTTCEEEESHEEE-EECSSCTCCEE--ETTTSBTSEEEEEEEEEETT---EECCSSEEEEEEEESS-STTHH
T ss_pred EEeEcccccccceeeeccccccccccccceeee--ecccccccceeeeeeccccccccccccCCCEEEEEEECcCCCHHH
Confidence 99999 555667888888766 111 122222 234789999999999875 2234789999999999999999
Q ss_pred HHHHHH
Q psy8199 188 RVHMQW 193 (965)
Q Consensus 188 R~~~~~ 193 (965)
|+||++
T Consensus 159 R~hla~ 164 (164)
T PF00849_consen 159 RVHLAH 164 (164)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 999986
No 136
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=2e-25 Score=254.39 Aligned_cols=333 Identities=17% Similarity=0.161 Sum_probs=238.0
Q ss_pred eEEEecCCcccccccccchhccCCC-CCHHHHHHHHHHHhhcccc----ccCCCCcHHHHHHHHHHHhhcCCCCCeEEEc
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYG 320 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~av~~~~~~~~~~----~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~ 320 (965)
+||++ +|++|||+.++ .++|| .+|+|++|+.+++...... ....+..+...++++.++++++ .+.++++
T Consensus 32 ~~~~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~--~~~~i~~ 105 (385)
T PRK05958 32 RWLVV-DGRRMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG--AERALLF 105 (385)
T ss_pred ceeEe-CCceEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC--CCcEEEE
Confidence 89997 99999999987 35897 6899999999999764311 1122456778999999999985 4677778
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCCh
Q psy8199 321 SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA 400 (965)
Q Consensus 321 ~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (965)
++|++++..+++... .+++.|++.+ .+|+....+....+. .+..++.
T Consensus 106 ~~g~~~~~~~l~~~~--------~~gd~V~~~~-~~~~~~~~~~~~~g~------------~~~~~~~------------ 152 (385)
T PRK05958 106 SSGYAANLAVLTALA--------GKGDLIVSDK-LNHASLIDGARLSRA------------RVRRYPH------------ 152 (385)
T ss_pred CcHHHHHHHHHHHhC--------CCCCEEEEeC-ccCHHHHHHHHhcCC------------ceEEeCC------------
Confidence 889999988876542 2456666655 556654444333321 1223332
Q ss_pred hHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc-C-CCcccccccc-
Q psy8199 401 NEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-G-CGRTGKFFAC- 477 (965)
Q Consensus 401 ~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~- 477 (965)
.|+++++++++....+++++++++ +++++|...+ +++|.++|++||+++|+||+|+ | +++.|..+..
T Consensus 153 -----~d~~~l~~~i~~~~~~~~lvi~~~-~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~ 222 (385)
T PRK05958 153 -----NDVDALEALLAKWRAGRALIVTES-VFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAE 222 (385)
T ss_pred -----CCHHHHHHHHHhccCCCeEEEEEe-cccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHh
Confidence 257888888865333578899999 8999998776 9999999999999999999995 2 3334432211
Q ss_pred cccCCCcc---eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc-cHHHH
Q psy8199 478 EHAEIWPD---FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD-NILQR 553 (965)
Q Consensus 478 ~~~~~~pD---ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~-~~~~~ 553 (965)
......+| +.++||+++. +.|++++++++++.+... .. .+..+.++++++++++.++|+.+.+. ...++
T Consensus 223 ~~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~ 295 (385)
T PRK05958 223 AGLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLINR--AR--PFIFTTALPPAQAAAARAALRILRREPERRER 295 (385)
T ss_pred hCCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHHh--Cc--cceecCCCCHHHHHHHHHHHHHHhcCHHHHHH
Confidence 11223466 4578999864 337888898888876531 11 12344567899999999999987653 67788
Q ss_pred HHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--------CCEEEEeC
Q psy8199 554 ISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMP 625 (965)
Q Consensus 554 ~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR~~p 625 (965)
+.++++++.+.|+++ ++..+.+.|.|+.+.+. + .....++.+.|.++||.+.+. .+++|++|
T Consensus 296 ~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~ 365 (385)
T PRK05958 296 LAALIARLRAGLRAL----GFQLMDSQSAIQPLIVG--D----NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITL 365 (385)
T ss_pred HHHHHHHHHHHHHHc----CCCcCCCCCCEEEEEeC--C----HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEe
Confidence 999999999999875 23334567888877763 1 122446888899999999752 25899999
Q ss_pred CcccCHHHHHHHHHhhhcc
Q psy8199 626 PYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 626 ~~~~t~~~i~~~~~~l~~~ 644 (965)
+..+++++++++++++.+.
T Consensus 366 ~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 366 TAAHTEADIDRLLEALAEA 384 (385)
T ss_pred cCCCCHHHHHHHHHHHHhc
Confidence 9999999999999988654
No 137
>PRK10839 16S rRNA pseudouridylate synthase A; Provisional
Probab=99.95 E-value=2.6e-28 Score=253.74 Aligned_cols=146 Identities=18% Similarity=0.185 Sum_probs=111.1
Q ss_pred ecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcC
Q psy8199 34 EDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQ 113 (965)
Q Consensus 34 e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~ 113 (965)
++.+|+|+|||+|++||++.... .++...+.... ..++.+|||||++||||||||||+.++++|+. +.+.+.
T Consensus 58 ~~~~~lvvnKP~G~~~~~~~~~~-~tl~~~l~~~~-----~~~~~~v~RLD~~TSGlll~ak~~~~~~~l~~--~~~~i~ 129 (232)
T PRK10839 58 HGPRYFMLNKPQGYVCSTDDPDH-PTVLYFLDEPV-----AYKLHAAGRLDIDTTGLVLMTDDGQWSHRITS--PRHHCE 129 (232)
T ss_pred CCCEEEEEECCCCeEecccCCCC-CeEEEeccccc-----ccCceecCCCCCCceeEEEEecCHHHHHHHhC--CCCCCC
Confidence 35689999999999999875432 45543332111 12577999999999999999999999999997 788999
Q ss_pred eEEEEEEcCccCCCceEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHH
Q psy8199 114 RKYLAMVWGIPKLNGMINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHMQW 193 (965)
Q Consensus 114 K~Y~a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~ 193 (965)
|+|+|.+++.+..+.. ......+.. +++.+.|+|.++... + .|+++|+|.|||+||||+||++
T Consensus 130 K~Y~a~i~~~i~~~~~----------~~~~~~~~~--~g~~a~t~~~~~~~~----~-~sll~~~l~tGRtHQIR~h~~~ 192 (232)
T PRK10839 130 KTYLVTLESPVADDTA----------EQFAKGVQL--HNEKDLTKPAVLEVI----T-PTQVRLTISEGRYHQVKRMFAA 192 (232)
T ss_pred eEEEEEECCCCCHHHH----------HHHHCCeEE--CCCcccccccEEEEe----c-CCEEEEEEEcCcCHHHHHHHHH
Confidence 9999999887653210 000111111 467788999998763 2 3899999999999999999999
Q ss_pred hCCceecCCCC
Q psy8199 194 LGHGIVGDNLY 204 (965)
Q Consensus 194 ~g~pi~gD~~~ 204 (965)
+||||+|=...
T Consensus 193 ~G~pi~gl~R~ 203 (232)
T PRK10839 193 VGNHVVELHRE 203 (232)
T ss_pred cCCeEeeEEEE
Confidence 99999996554
No 138
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.95 E-value=1.1e-25 Score=250.11 Aligned_cols=334 Identities=16% Similarity=0.114 Sum_probs=242.5
Q ss_pred CCcccccccccchhccCCCC-CHHHHHHHHHHHhhccccc----cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~~~~----~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA 326 (965)
.+++++||.|+ .+||.. ||++.+++.+++++.+... ...+.+....+|+++|++++ +.+.+++++||..|
T Consensus 100 ~~r~~l~FsSn---dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--g~e~all~sSGy~A 174 (476)
T PLN02955 100 RFKKLLLFSGN---DYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--KKEDCLVCPTGFAA 174 (476)
T ss_pred CCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--CCCcEEEECChHHH
Confidence 34688998875 678865 9999999999998864321 22356778899999999999 57899999999999
Q ss_pred HHHHHHHHHHHHH---hcC--CCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChh
Q psy8199 327 VEVALKMSFHYWY---NKG--FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN 401 (965)
Q Consensus 327 ~~~Al~~a~~~~~---~~g--~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (965)
|..++........ ..+ ..+++.+|+.|..-|.+...+..++.... +.....++
T Consensus 175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~----------~a~~~~f~------------ 232 (476)
T PLN02955 175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQG----------NVEVFVYR------------ 232 (476)
T ss_pred HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccC----------CceEEEeC------------
Confidence 9999986521100 000 02456688889999998766655442110 11111122
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc--cccccc
Q psy8199 402 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFACEH 479 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~~~~~ 479 (965)
+||+++|++++++..++.++|++|+ +.++.|.+.| |++|.++|++||++||+||+|+ +|+.|+ .+..++
T Consensus 233 ---HND~~~Le~~L~~~~~~~~~Vv~Eg-V~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e~ 303 (476)
T PLN02955 233 ---HCDMYHLNSLLSSCKMKRKVVVTDS-LFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHG-TFVCGENGGGVAEE 303 (476)
T ss_pred ---CCCHHHHHHHHHhCCCCceEEEEeC-CCCCCCCcCC----HHHHHHHHHHcCcEEEEccccc-CceecCCCCcHHHH
Confidence 2799999999987666678999999 9999999988 9999999999999999999996 566776 456778
Q ss_pred cCCCcce----eeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc-cHHHHH
Q psy8199 480 AEIWPDF----LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD-NILQRI 554 (965)
Q Consensus 480 ~~~~pDi----vt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~-~~~~~~ 554 (965)
+|+.+|+ .||||++|. .-|++++++++++.+.. ..+++.++ | +.+|..+++++++++.+..+ ...+++
T Consensus 304 ~g~~~di~ii~~TLsKA~G~---~GGfi~gs~~~~~~l~~--~~~~~ifS-t-alpp~~aaa~laal~l~~~~~~~r~~L 376 (476)
T PLN02955 304 FNCEADVDLCVGTLSKAAGC---HGGFIACSKKWKQLIQS--RGRSFIFS-T-AIPVPMAAAAYAAVVVARKEKWRRKAI 376 (476)
T ss_pred hCCCCCCcEEEEeCccchhc---cCceeecHHHHHHHHHH--hCCCCeec-c-cccHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 8887776 589999873 22458899999988875 22334322 2 45667778888999987543 455777
Q ss_pred HHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--------CCEEEEeCC
Q psy8199 555 SQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPP 626 (965)
Q Consensus 555 ~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR~~p~ 626 (965)
+++.+++++.+ ++. + ...++.+.+. + ...+..+.+.|+++|+++.+. ...+||+.+
T Consensus 377 ~~n~~~fr~~~-------G~~-~--~sPI~pI~ig--~----~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~ls 440 (476)
T PLN02955 377 WERVKEFKALS-------GVD-I--SSPIISLVVG--N----QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLS 440 (476)
T ss_pred HHHHHHHHHhc-------CCC-C--CCCEEEEEeC--C----HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeC
Confidence 77777777631 111 1 2455555554 2 333556889999999998742 247999999
Q ss_pred cccCHHHHHHHHHhhhcc
Q psy8199 627 YILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 627 ~~~t~~~i~~~~~~l~~~ 644 (965)
..+++++|+.+++++.+.
T Consensus 441 A~Ht~edId~lv~~L~~~ 458 (476)
T PLN02955 441 AAHTTEDVKKLITALSSC 458 (476)
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 999999999999988654
No 139
>cd02553 PseudoU_synth_RsuA PseudoU_synth_RsuA: Pseudouridine synthase, Escherichia coli RsuA like. This group is comprised of eukaryotic and bacterial proteins similar to Escherichia coli RsuA. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E.coli RsuA makes psi516 in 16S RNA. Psi at this position is not generally conserved in other organisms.
Probab=99.95 E-value=8.4e-28 Score=234.92 Aligned_cols=142 Identities=21% Similarity=0.245 Sum_probs=109.0
Q ss_pred EEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEE
Q psy8199 38 IIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYL 117 (965)
Q Consensus 38 ~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~ 117 (965)
|+|+|||+|++|+++.. ...++.+.+...+. .+++.+|||||++||||||||||.++++++.+ +.+.++|+|+
T Consensus 2 ~ivvnKP~G~~~~~~~~-~~~tl~~~l~~~~~----~~~~~~vhRLD~~TSGlll~ak~~~~~~~l~~--~~~~i~K~Y~ 74 (167)
T cd02553 2 YLMLNKPAGVVCATKDP-HHPTVIDLLPEPDR----RRDLFPVGRLDKDTTGLLLLTNDGQLAHRLTS--PKKHVPKTYE 74 (167)
T ss_pred EEEEECCCCCEeCCCCC-CCCcHHHHhhhhcc----cCCeEEcccCCCCCEEEEEEEeCHHHHHHhhC--CcCCCceEEE
Confidence 79999999999996543 45788888866542 24688999999999999999999999999988 6889999999
Q ss_pred EEEcCccCCCceEeeccccCCCCCeeEEEccCCCC-cceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCC
Q psy8199 118 AMVWGIPKLNGMINAAIMRNPHNRIKMTVSKNFNA-KPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGH 196 (965)
Q Consensus 118 a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~ 196 (965)
|+|.|.++++.. .. + . . ..... ++ +...+.++++. .++++|+|.|||+||||+||+++||
T Consensus 75 a~V~G~~~~~~~-~~-~--~--~--~~~~~---~~~~~~~~~~~~~~--------~sll~v~l~tGR~HQIR~hla~lG~ 135 (167)
T cd02553 75 VTLAGPLTEDDI-EA-F--A--E--GVLLH---DGYPTKPAKLEILS--------PTTVRLTITEGKYHQVKRMFAAVGN 135 (167)
T ss_pred EEEccCCCHHHH-HH-H--H--C--CeEEc---CCCEeeeeEEEEeC--------CcEEEEEEEeCCCHHHHHHHHHcCC
Confidence 999998865321 10 0 0 0 01111 12 22344555542 2999999999999999999999999
Q ss_pred ceecCCCCC
Q psy8199 197 GIVGDNLYG 205 (965)
Q Consensus 197 pi~gD~~~~ 205 (965)
||++|..++
T Consensus 136 pI~~~~R~~ 144 (167)
T cd02553 136 KVVALHRIR 144 (167)
T ss_pred eEEEEEEEE
Confidence 999998775
No 140
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=1e-25 Score=257.22 Aligned_cols=323 Identities=16% Similarity=0.178 Sum_probs=228.9
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhcccc----ccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcC
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGS 321 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~----~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ 321 (965)
.+++|.+|++|||+. +||+|++|+.+++++.+.. .......+...+|+++|++.++ .+.+++++
T Consensus 54 ~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--~~~~~~~~ 121 (407)
T PRK07179 54 PDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG--FESCLLCQ 121 (407)
T ss_pred CcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC--CCcEEEEC
Confidence 678899999999986 6899999999999875211 1111233578899999999985 56789999
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChh
Q psy8199 322 DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN 401 (965)
Q Consensus 322 sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (965)
||++||+.+++.+.. +++.+++ +...|.+........ +....+.+
T Consensus 122 sG~~An~~~l~~l~~--------~g~~v~~-~~~~h~s~~~~~~~~--------------g~~~~~~~------------ 166 (407)
T PRK07179 122 SGWAANVGLLQTIAD--------PNTPVYI-DFFAHMSLWEGVRAA--------------GAQAHPFR------------ 166 (407)
T ss_pred CHHHHHHHHHHHhCC--------CCCEEEE-ECCcCHHHHHHHHHC--------------CCeEEEec------------
Confidence 999999999997643 3345554 444454432221111 11122221
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCc---cccccccc
Q psy8199 402 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR---TGKFFACE 478 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr---~G~~~~~~ 478 (965)
.+|+++|++++++. +.++|++++ ++|++|.+.| +++|.++|++||+++|+||+|+ +|+ +|..+ ++
T Consensus 167 ---~~d~~~l~~~l~~~--~~~lV~v~~-v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~-~g~~g~~g~g~-~~ 234 (407)
T PRK07179 167 ---HNDVDHLRRQIERH--GPGIIVVDS-VYSTTGTIAP----LADIVDIAEEFGCVLVVDESHS-LGTHGPQGAGL-VA 234 (407)
T ss_pred ---CCCHHHHHHHHHhc--CCeEEEECC-CCCCCCcccc----HHHHHHHHHHcCCEEEEECccc-ccCcCCCCCch-HH
Confidence 14788999988642 367899999 9999999988 8999999999999999999997 444 44322 44
Q ss_pred ccCCC--cceee--eccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc-cHHHH
Q psy8199 479 HAEIW--PDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD-NILQR 553 (965)
Q Consensus 479 ~~~~~--pDivt--~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~-~~~~~ 553 (965)
.+++. +|+++ +||++++ ++|++++++++++.+.. ...+..+++|+ ++..++++.++++.+... ...++
T Consensus 235 ~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~~~~~~~~~~--~~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~ 307 (407)
T PRK07179 235 ELGLTSRVHFITASLAKAFAG---RAGIITCPRELAEYVPF--VSYPAIFSSTL--LPHEIAGLEATLEVIESADDRRAR 307 (407)
T ss_pred hcCCCCCCCEEEeechHhhhc---cCeEEEeCHHHHHHHHH--hCcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHH
Confidence 56664 48764 6898864 68999999998887753 11223344554 355666677888877654 47788
Q ss_pred HHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEe----ec----CCEEEEeC
Q psy8199 554 ISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR----PI----GNTVYLMP 625 (965)
Q Consensus 554 ~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~----~~~lR~~p 625 (965)
++++++++++.|+++ ++ .+.+.|.++.+.+. + ......+.+.|.++||++. |. .+.+||++
T Consensus 308 l~~~~~~l~~~L~~~----g~-~v~~~~~i~~l~~~--~----~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~ 376 (407)
T PRK07179 308 LHANARFLREGLSEL----GY-NIRSESQIIALETG--S----ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSL 376 (407)
T ss_pred HHHHHHHHHHHHHHc----CC-CCCCCCCEEEEEeC--C----HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEE
Confidence 999999999999876 22 23466788877763 1 1124467788999999743 32 36899999
Q ss_pred CcccCHHHHHHHHHhhhccc
Q psy8199 626 PYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 626 ~~~~t~~~i~~~~~~l~~~~ 645 (965)
+..+++++++++++++.+.+
T Consensus 377 ~~~~t~edi~~~~~~l~~~~ 396 (407)
T PRK07179 377 NADLTASDLDRVLEVCREAR 396 (407)
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999887543
No 141
>cd02566 PseudoU_synth_RluE PseudoU_synth_RluE: Pseudouridine synthase, Escherichia coli RluE. This group is comprised of bacterial proteins similar to E. coli RluE. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. Escherichia coli RluE makes psi2457 in 23S RNA. psi2457 is not universally conserved.
Probab=99.94 E-value=2e-27 Score=232.77 Aligned_cols=155 Identities=17% Similarity=0.182 Sum_probs=109.4
Q ss_pred EEEEECCCCCeeeeCCC-CCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEE
Q psy8199 38 IIILNKSAGLVVHPAIG-NLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKY 116 (965)
Q Consensus 38 ~lv~nKP~G~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y 116 (965)
|+++|||+|++|+++++ ....++.+.+.. +++.+|||||++||||||||+|++++++|.+ +++.++|+|
T Consensus 1 ~lv~nKP~G~~~~~~~~~~~~~~l~~~l~~--------~~~~~v~RLD~~TsGlll~a~d~~~~~~l~~--~~~~v~K~Y 70 (168)
T cd02566 1 LILFNKPYGVLSQFTDESEKHKTLKDYIDD--------PGVYAAGRLDRDSEGLLLLTDDGRLQHRITD--PSFKHPKTY 70 (168)
T ss_pred CEEEECCCCCEEecCCCcCCCccHHHHcCc--------CCeEEccCCCCCCeEEEEEEeCHHHHHHHHC--CCCCCCEEE
Confidence 68999999999998765 445677776631 3678999999999999999999999999988 677899999
Q ss_pred EEEEcCccCCCce--EeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHh
Q psy8199 117 LAMVWGIPKLNGM--INAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWL 194 (965)
Q Consensus 117 ~a~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~ 194 (965)
+|+|.|.++++.. +..++..+........+..........+.|+++... ...+.|+++|+|.|||+||||+||+++
T Consensus 71 ~a~v~g~~~~~~~~~l~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~sll~v~l~tGR~HQIR~~la~l 148 (168)
T cd02566 71 YVQVEGVPTEDALEQLRNGVELGDGLTLPAKVEKVDEPPWLWEREPPIRFR--KNIPTSWIEITICEGKNRQVRRMTAAV 148 (168)
T ss_pred EEEECCcCCHHHHHHHhCCcEECCeEecceEEEEecccccccccccccccc--cCCCccEEEEEEecCccHHHHHHHHHc
Confidence 9999999865321 122222211111111221111122344455555431 124568999999999999999999999
Q ss_pred CCceecCCCC
Q psy8199 195 GHGIVGDNLY 204 (965)
Q Consensus 195 g~pi~gD~~~ 204 (965)
||||+.....
T Consensus 149 G~pV~~L~R~ 158 (168)
T cd02566 149 GFPTLRLIRV 158 (168)
T ss_pred CCeEeEEEEE
Confidence 9999976543
No 142
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.94 E-value=1.3e-24 Score=247.23 Aligned_cols=333 Identities=16% Similarity=0.172 Sum_probs=232.1
Q ss_pred eEEEecCCcccccccccchhccCCC-CCHHHHHHHHHHHhhccc----cccCCCCcHHHHHHHHHHHhhcCCCCCeEEEc
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEH----VMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYG 320 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~av~~~~~~~~~----~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~ 320 (965)
+||+ .||++||||.++ .++|| .+|++.+++.+++++... +....+..+...++++++++.++ .+..++.
T Consensus 26 ~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g--~~~~i~~ 99 (385)
T TIGR01825 26 PRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK--TEAALVF 99 (385)
T ss_pred ceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC--CCcEEEE
Confidence 7899 999999999775 55899 799999999999876422 22234567889999999999886 3455666
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCCh
Q psy8199 321 SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA 400 (965)
Q Consensus 321 ~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (965)
+||++|+..|++.+. .+++.|++.+ .+|+....++...+. ....++.
T Consensus 100 ~sG~~a~~~a~~~~~--------~~gd~vi~~~-~~~~~~~~~~~~~g~------------~~~~~~~------------ 146 (385)
T TIGR01825 100 QSGFNTNQGVLSALL--------RKGDIVLSDE-LNHASIIDGLRLTKA------------TKKIYKH------------ 146 (385)
T ss_pred CcHHHHHHHHHHHhC--------CCCCEEEEEc-cccHHHHHHHHhcCC------------ceEEeCC------------
Confidence 788999998888663 2455666554 555554433333221 1111111
Q ss_pred hHHHHHHHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccC--CCcccccccc
Q psy8199 401 NEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG--CGRTGKFFAC 477 (965)
Q Consensus 401 ~~~~~~d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~~~ 477 (965)
.|++++++.+.+. ..++++|++++ +++++|.+.+ +++|.++|++||+++|+||+|+. +++.|. +..
T Consensus 147 -----~d~~~l~~~l~~~~~~~~~~v~~~~-v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~ 215 (385)
T TIGR01825 147 -----ADMDDLDRVLRENPSYGKKLIVTDG-VFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGR-GTV 215 (385)
T ss_pred -----CCHHHHHHHHHhhccCCCeEEEEec-CCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-ccH
Confidence 2556777777643 24678899999 8999998877 89999999999999999999963 344443 233
Q ss_pred cccCCCcc----eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHHH
Q psy8199 478 EHAEIWPD----FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQ 552 (965)
Q Consensus 478 ~~~~~~pD----ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~ 552 (965)
.++++.+| +.+|||++++ +.|++++++++++.+... ...+ ..+...+|+.++++.++|+.+.+ .+..+
T Consensus 216 ~~~~~~~~~~i~~~s~sK~~~~---~gG~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 288 (385)
T TIGR01825 216 HHFGLEDKVDIQVGTLSKAIGV---VGGYAAGHKELIEYLKNR--ARPF--LFSTAQPPAVVAALAAAVDELQRSPELME 288 (385)
T ss_pred hhcCCCcCCcEEEEeccHHhhc---CCCEEecCHHHHHHHHHh--Cccc--cccCCCCHHHHHHHHHHHHHHhcCHHHHH
Confidence 44455455 3589999854 447788899998887641 1111 12223578889999999987643 45778
Q ss_pred HHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee-------cC-CEEEEe
Q psy8199 553 RISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-------IG-NTVYLM 624 (965)
Q Consensus 553 ~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~-~~lR~~ 624 (965)
++.++++++.+.|+++ ++....+.+.++.+.+. . ......+.+.|+++||++.+ .+ +.+|++
T Consensus 289 ~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~--~----~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~ 358 (385)
T TIGR01825 289 RLWDNTRFFKAGLGKL----GYDTGGSETPITPVVIG--D----EKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNI 358 (385)
T ss_pred HHHHHHHHHHHHHHHc----CCCCCCCCCCEEEEEEC--C----HHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEE
Confidence 8888999999999775 23333344555555542 1 11234688888889998853 12 689999
Q ss_pred CCcccCHHHHHHHHHhhhccc
Q psy8199 625 PPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 625 p~~~~t~~~i~~~~~~l~~~~ 645 (965)
|++.+++++++++++++.+.+
T Consensus 359 ~~~~~~~e~i~~~~~~l~~~~ 379 (385)
T TIGR01825 359 PTAEHTKDDLDQALDAYEKVG 379 (385)
T ss_pred EcCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999987654
No 143
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=99.94 E-value=2.9e-25 Score=210.16 Aligned_cols=235 Identities=18% Similarity=0.231 Sum_probs=207.6
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHh
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK 761 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~ 761 (965)
+..|+++.++|.+||.+|+.+. -.. .-.-+.+++++.+.++.+.|+..+.+.||..+....+++++.+.++++++
T Consensus 11 ~~sISVTG~yC~lnC~HCg~~~--L~~---Mi~vt~~~l~k~~~el~kkGy~g~llSGGm~srg~VPl~kf~d~lK~lke 85 (275)
T COG1856 11 FISISVTGAYCSLNCPHCGRHY--LEH---MIKVTTKSLLKRCMELEKKGYEGCLLSGGMDSRGKVPLWKFKDELKALKE 85 (275)
T ss_pred CceEEEeccceEecChHHHHHH--HHH---hcccchHHHHHHHHHHHhcCceeEEEeCCcCCCCCccHHHHHHHHHHHHH
Confidence 4567787899999999998432 222 11245688999999999999999999999988888899999999999997
Q ss_pred -cCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhcccC-CCCHHHHHHHHHHHHHcCCceeeeEEEec-CCCH
Q psy8199 762 -IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIIS-TRDYENRLNTLKNVRNVGINICCGGIIGL-SESR 838 (965)
Q Consensus 762 -~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~-~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl-~et~ 838 (965)
.++.+..+.|..+++.++.||++++|.+.+.+-+++++.+.+.+ +++.+++++.++.+++.|+++..|+++|+ .-..
T Consensus 86 ~~~l~inaHvGfvdE~~~eklk~~~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l~~L~e~~irvvpHitiGL~~gki 165 (275)
T COG1856 86 RTGLLINAHVGFVDESDLEKLKEELVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSLLLLKENGIRVVPHITIGLDFGKI 165 (275)
T ss_pred hhCeEEEEEeeeccHHHHHHHHHhcCcEEEEeecCChHHHHHHHcCCccHHHHHHHHHHHHHcCceeceeEEEEeccCcc
Confidence 79999999999999999999999999999999999999999988 67999999999999999999999999999 4444
Q ss_pred HHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceecccccc--ccchhhHHHHh
Q psy8199 839 DQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRK--EMGETTQAFCF 916 (965)
Q Consensus 839 ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~--~~~~~~~~~~l 916 (965)
+.-.+.++.|.+.. ++.+.+..++|.|||.|.+.+|++.+|..+++..||..+|+ .+.+.|+|+ ....+++..+.
T Consensus 166 ~~e~kaIdiL~~~~--~DalVl~vliPtpGtkm~~~~pp~~eE~i~v~~~AR~~f~~-pv~iGCmrP~Ge~rvk~d~~av 242 (275)
T COG1856 166 HGEFKAIDILVNYE--PDALVLVVLIPTPGTKMGNSPPPPVEEAIKVVKYARKKFPN-PVSIGCMRPRGEWRVKLDKEAV 242 (275)
T ss_pred cchHHHHHHHhcCC--CCeEEEEEEecCCchhccCCCCcCHHHHHHHHHHHHHhCCC-CeeEeecCcCchhHHHHHHHHH
Confidence 44567788889999 99999999999999999999999999999999999999999 688888884 44677888999
Q ss_pred hcCccEEe
Q psy8199 917 LAGANSIF 924 (965)
Q Consensus 917 ~~Gan~~~ 924 (965)
.+|+|.|-
T Consensus 243 ~~gVd~It 250 (275)
T COG1856 243 LAGVDRIT 250 (275)
T ss_pred HcCCceee
Confidence 99999864
No 144
>cd02555 PSSA_1 PSSA_1: Pseudouridine synthase, a subgroup of the RsuA family. This group is comprised of bacterial proteins assigned to the RsuA family of pseudouridine synthases. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. The TruA family is comprised of proteins related to Escherichia coli RsuA.
Probab=99.93 E-value=2.2e-26 Score=225.43 Aligned_cols=141 Identities=23% Similarity=0.304 Sum_probs=104.6
Q ss_pred CcEEEEECCCCCeeeeCCC--------CCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHH
Q psy8199 36 NEIIILNKSAGLVVHPAIG--------NLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQL 107 (965)
Q Consensus 36 ~~~lv~nKP~G~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~ 107 (965)
..|+++|||+|++|+..+. ....+..+.+...+ +++.+|||||++||||||||||+++++.|++
T Consensus 4 ~~y~llnKP~G~l~s~~d~~~~~g~~~~~~~~~~~~l~~~~------~~l~~VgRLD~dTsGLLl~t~d~~~~~~L~~-- 75 (177)
T cd02555 4 PVTLLLHKPAGMVSEQALALLGPGQRSAADRSGRRPLKGHF------ARLAPIGPLDKDASGLLVFSQDGRVLRKLIG-- 75 (177)
T ss_pred cEEEEEECCCceEecCCCcccccccccccccchhhhhhhcC------CceeEecCCCCCCeeEEEEECCHHHHHHHhC--
Confidence 4689999999999976552 12234445554433 3788999999999999999999999999999
Q ss_pred HcCCcCeEEEEEEcCccCCCce--EeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCccc
Q psy8199 108 KMHIVQRKYLAMVWGIPKLNGM--INAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTH 185 (965)
Q Consensus 108 ~~~~~~K~Y~a~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~h 185 (965)
+.+.++|+|+|+|.|.+++++. +..++..+. ...+++.+.+ .+.++++++|.|||+|
T Consensus 76 ~~~~i~K~Y~v~v~g~~~~~~l~~l~~g~~~~~-----------~~~~~~~~~~----------~~~~~l~i~l~tGr~h 134 (177)
T cd02555 76 DASRLEQEYLVEVRGELTAGGLERLNHGLTYDG-----------RELPPAKVSW----------QNEQRLRFALKEPQPG 134 (177)
T ss_pred hhcCCCEEEEEEEcccCCHHHHHHHhcCcccCC-----------eecceEEEEE----------cCCCEEEEEEECCcCh
Confidence 6788999999999998876432 222221110 0012233222 2247999999999999
Q ss_pred HHHHHHHHhCCceecCCCCC
Q psy8199 186 QIRVHMQWLGHGIVGDNLYG 205 (965)
Q Consensus 186 QIR~~~~~~g~pi~gD~~~~ 205 (965)
|||+||+++||||+|+....
T Consensus 135 QIR~~~~~~G~pV~~L~R~~ 154 (177)
T cd02555 135 QIRRMCESVGLEVVALRRIR 154 (177)
T ss_pred HHHHHHHHcCCeEEEEEEEE
Confidence 99999999999999998763
No 145
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=2.2e-24 Score=246.48 Aligned_cols=330 Identities=16% Similarity=0.185 Sum_probs=229.3
Q ss_pred cCCcccccccccchhccCCC-CCHHHHHHHHHHHhhccccc----cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 251 FSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh-~~p~v~~av~~~~~~~~~~~----~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
.+|+++++|.++ ..+|. +||++++|+.+++++.+... .....++...+|+++++++++ .+..++++||++
T Consensus 43 ~~~~~~~~~~sn---~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g--~~~~i~~~sG~~ 117 (410)
T PRK13392 43 DGPRRVTIWCSN---DYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG--KESALLFTSGYV 117 (410)
T ss_pred CCCceEEEEECC---CccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC--CCCEEEECcHHH
Confidence 357889999885 55666 49999999999998764321 111234567899999999996 356777788999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|++.+++..... .+++ +|+.+..+|++...++...+.. +..++.
T Consensus 118 a~~~~i~~l~~~------~~g~-~vi~~~~~h~s~~~~~~~~g~~------------~~~~~~----------------- 161 (410)
T PRK13392 118 SNDAALSTLGKL------LPGC-VILSDALNHASMIEGIRRSGAE------------KQVFRH----------------- 161 (410)
T ss_pred HHHHHHHHHhcC------CCCC-EEEEehhhhHHHHHHHHHcCCe------------EEEEeC-----------------
Confidence 999999854321 1233 5666777898865544433311 111111
Q ss_pred HHHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc-CC-CcccccccccccCC
Q psy8199 406 CAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GC-GRTGKFFACEHAEI 482 (965)
Q Consensus 406 ~d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~-gr~G~~~~~~~~~~ 482 (965)
+|.+++++.+++. .+++.+|++|+ ++|++|.+.+ +++|.++|++||+++|+||+|+ |+ |+.|..+ .++.++
T Consensus 162 ~d~~~l~~~l~~~~~~~t~~v~i~~-~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~ 235 (410)
T PRK13392 162 NDLADLEEQLASVDPDRPKLIAFES-VYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGL 235 (410)
T ss_pred CCHHHHHHHHHhccCCCCEEEEEeC-CCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccC
Confidence 2345566666543 34678899999 8999999887 9999999999999999999998 43 5555433 344444
Q ss_pred --Cccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc-cHHHHHHHH
Q psy8199 483 --WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD-NILQRISQD 557 (965)
Q Consensus 483 --~pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~-~~~~~~~~~ 557 (965)
.+|++ +|||+++. +-|++++++++++.+..- ..++ ..+.+.+|++++++.++|+.++.. ...+++.++
T Consensus 236 ~~~~div~~tlsK~~g~---~GG~~~~~~~~~~~l~~~--~~~~--~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~ 308 (410)
T PRK13392 236 MDRIDMIQGTLAKAFGC---LGGYIAASADLIDFVRSF--APGF--IFTTALPPAVAAGATAAIRHLKTSQTERDAHQDR 308 (410)
T ss_pred CCCCcEEEEEChHhhhc---ccchhhcCHHHHHHHHHh--Ccch--hccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 46777 89998865 226778899998877641 1111 235567888999999999987643 245667888
Q ss_pred HHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------C-CEEEEeCCcc
Q psy8199 558 MKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------G-NTVYLMPPYI 628 (965)
Q Consensus 558 ~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~-~~lR~~p~~~ 628 (965)
.+++++.|+++ ++....+.+.++.+.+. + .....++.+.|+ ++||++.+. + .++|+++++.
T Consensus 309 ~~~l~~~L~~~----g~~~~~~~~~~~~i~~~--~----~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~ 378 (410)
T PRK13392 309 VAALKAKLNAN----GIPVMPSPSHIVPVMVG--D----PTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPL 378 (410)
T ss_pred HHHHHHHHHHc----CCCCCCCCCCEEEEEeC--C----HHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCC
Confidence 88888888765 33334566777655543 2 112446778886 689999753 2 5899999999
Q ss_pred cCHHHHHHHHHhhhcc
Q psy8199 629 LNKNEIQHMTSAIFQT 644 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~~ 644 (965)
+++++++.+++++.+.
T Consensus 379 ~t~edid~l~~aL~~~ 394 (410)
T PRK13392 379 HDDEDIDALVAALVAI 394 (410)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999988755
No 146
>PRK11394 23S rRNA pseudouridine synthase E; Provisional
Probab=99.93 E-value=3.3e-26 Score=228.26 Aligned_cols=160 Identities=18% Similarity=0.168 Sum_probs=111.2
Q ss_pred ecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcC
Q psy8199 34 EDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQ 113 (965)
Q Consensus 34 e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~ 113 (965)
+...|+++|||+|++|+..+.....++.+.+. ..++++|||||++||||||||+|++++++|++ +++.+.
T Consensus 37 ~~~~ylllnKP~G~l~~~~d~~~~~tl~d~l~--------~~~~~~vgRLD~~TsGllLlt~d~~~~~~L~~--~~~~i~ 106 (217)
T PRK11394 37 QPTRVILFNKPYDVLPQFTDEAGRKTLKEFIP--------VQGVYAAGRLDRDSEGLLVLTNNGALQARLTQ--PGKRTG 106 (217)
T ss_pred CCCEEEEEECCCCCEEeeCCccCCcchHHhcc--------cCCeEEecCCCCCCeeEEEEECCHHHHHHHhC--cccCCC
Confidence 34579999999999999766555678888763 13678999999999999999999999999999 688999
Q ss_pred eEEEEEEcCccCCCc--eEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHH
Q psy8199 114 RKYLAMVWGIPKLNG--MINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHM 191 (965)
Q Consensus 114 K~Y~a~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~ 191 (965)
|+|+|+|.|.+.++. .+..++..+........+........-...++.+... ...+.++++|+|.|||+||||+||
T Consensus 107 K~Y~~~v~g~~~~~~l~~l~~Gv~i~~~~~~p~~~~~i~~~~~~~~~~~~~~~~--~~~~~s~l~I~L~eGR~hQIRrm~ 184 (217)
T PRK11394 107 KIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER--KSIPTSWLKITLYEGRNRQVRRMT 184 (217)
T ss_pred EEEEEEECCCCCHHHHHHHhCCeEECCccccccEEEEecccccccccccccccc--cCCCceEEEEEEeCCCCHHHHHHH
Confidence 999999999886532 1222222221110000000000000000001111110 013568999999999999999999
Q ss_pred HHhCCceecCCCCC
Q psy8199 192 QWLGHGIVGDNLYG 205 (965)
Q Consensus 192 ~~~g~pi~gD~~~~ 205 (965)
+++||||+||..|+
T Consensus 185 a~lG~pVl~L~Ry~ 198 (217)
T PRK11394 185 AHVGFPTLRLIRYA 198 (217)
T ss_pred HHcCCeEeeeEEEE
Confidence 99999999999996
No 147
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.93 E-value=7.1e-24 Score=241.83 Aligned_cols=335 Identities=15% Similarity=0.167 Sum_probs=234.7
Q ss_pred eEEEecCCcccccccccchhccCCCC-CHHHHHHHHHHHhhc-cccccCC---CCcHHHHHHHHHHHhhcCCCCCeEEEc
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKL-EHVMLSN---LTHKPVIKLSEKLSSLTQYKLGHCFYG 320 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~-~~~~~~~---~~~~~~~~la~~l~~~~~~~~~~v~~~ 320 (965)
.++++.+|++|+||.++ .+||++ +|++++++.+++.+. ..++.+. +..+...++.+.+++.++ .+.++++
T Consensus 30 ~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g--~~~~ii~ 104 (393)
T TIGR01822 30 ADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLG--TEDTILY 104 (393)
T ss_pred ceEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC--CCcEEEE
Confidence 57888899999999987 568887 999999999998773 2222222 336667889999999996 3567777
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCCh
Q psy8199 321 SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA 400 (965)
Q Consensus 321 ~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (965)
+||++|+..++.... .+++.|++.++.|++...+. ...+. .....+.
T Consensus 105 ~~~~~a~~~~~~~l~--------~~gd~vi~~~~~~~s~~~~~-~~~~~------------~~~~~~~------------ 151 (393)
T TIGR01822 105 ASCFDANGGLFETLL--------GAEDAIISDALNHASIIDGV-RLCKA------------KRYRYAN------------ 151 (393)
T ss_pred CchHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHH-HhcCC------------ceEEeCC------------
Confidence 999999998776553 25678888777766543222 11110 0111111
Q ss_pred hHHHHHHHHHHHHHHHhC---CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc--c
Q psy8199 401 NEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF--F 475 (965)
Q Consensus 401 ~~~~~~d~~~le~~l~~~---~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~--~ 475 (965)
+|+++|++.+.+. ..++.+|++++ +++++|.+.+ +++|.++|++||+++|+||+|. +|..|.. +
T Consensus 152 -----~d~~~l~~~i~~~~~~~~~~~~v~~~~-v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~-~g~~~~~~~~ 220 (393)
T TIGR01822 152 -----NDMADLEAQLKEARAAGARHRLIATDG-VFSMDGVIAP----LDEICDLADKYDALVMVDECHA-TGFLGPTGRG 220 (393)
T ss_pred -----CCHHHHHHHHHhhhhcCCCceEEEEeC-CccCCCCcCC----HHHHHHHHHHcCCEEEEECCcc-ccCcCCCCCc
Confidence 4678888888753 22678899998 8999999877 9999999999999999999994 4433321 1
Q ss_pred cccccCC--Cccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccH
Q psy8199 476 ACEHAEI--WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNI 550 (965)
Q Consensus 476 ~~~~~~~--~pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~ 550 (965)
..+..++ .+|++ ++||+++| +++|++++++++++.+... ..++..+ .+.++..+++++++|+.++. ++.
T Consensus 221 ~~~~~~~~~~~di~~~s~sK~l~g--~r~G~~~~~~~~~~~l~~~--~~~~~~~--~~~~~~~~~a~~~al~~~~~~~~~ 294 (393)
T TIGR01822 221 SHELCGVMGRVDIITGTLGKALGG--ASGGFTTARKEVVELLRQR--SRPYLFS--NSLPPAVVGASIKVLEMLEASNEL 294 (393)
T ss_pred hHHhcCCCCCCeEEEEEChHHhhC--CCcEEEEeCHHHHHHHHHh--Cccceec--CCCCHHHHHHHHHHHHHHhcCHHH
Confidence 2233444 36777 68999976 5899999999999887641 1122222 22356777788888887653 457
Q ss_pred HHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------C-CEEE
Q psy8199 551 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------G-NTVY 622 (965)
Q Consensus 551 ~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~-~~lR 622 (965)
.++++++.+++.+.|++. ++....+.+.++.+.+. + ......+.+.|.++||++... + ..+|
T Consensus 295 ~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~i~~~--~----~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iR 364 (393)
T TIGR01822 295 RDRLWANTRYFRERMEAA----GFDIKPADHPIIPVMLY--D----AVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIR 364 (393)
T ss_pred HHHHHHHHHHHHHHHHHc----CCCCCCCCCCEEEEEeC--C----HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEE
Confidence 788899999999988764 22222334555555543 1 122456888899999988631 2 4799
Q ss_pred EeCCcccCHHHHHHHHHhhhccc
Q psy8199 623 LMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 623 ~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+++++.+++++++++++++.+..
T Consensus 365 is~~~~~t~edi~~~~~~l~~~~ 387 (393)
T TIGR01822 365 VQISAAHTEEQLDRAVEAFTRIG 387 (393)
T ss_pred EEECCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999987643
No 148
>COG1187 RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]
Probab=99.93 E-value=5.7e-26 Score=229.12 Aligned_cols=181 Identities=21% Similarity=0.206 Sum_probs=137.6
Q ss_pred cccCCEEEEEcCCCCCCCCcccccCCCccEEE-ecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCcccc
Q psy8199 2 IISGYELIIIKPKKNFFLNKTEKKVIKLDIIY-EDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIV 80 (965)
Q Consensus 2 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~-e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 80 (965)
|++|+++ ++.+...++++.+.....+..+.+ +...|+++|||.|++|+..++.++.|+++.+....+ ...++++|
T Consensus 29 V~VnG~v-~~~~~~~v~~~~~~i~v~g~~~~~~~~~~y~llnKP~G~v~s~~D~~gr~tv~D~lp~~~~---~~~~~~pv 104 (248)
T COG1187 29 VTVNGKV-ATLGGVVVDPDDDVVEVDGKRIELKEERVYLLLNKPRGYVSSTEDDEGRPTVFDLLPERLP---RKKRLFPV 104 (248)
T ss_pred EEECCEE-eccCCeEeCCCCcEEEECCEEeeccccceEEEEECCCCeEecccCCCCCceeeeecccccc---cccceeec
Confidence 6778888 678888787776656666766777 455599999999999998877778899998864321 23469999
Q ss_pred ccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEEEEEcCccCCC--ceEeeccccCCCCCeeEEEccCCCCcceEEE
Q psy8199 81 HRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYLAMVWGIPKLN--GMINAAIMRNPHNRIKMTVSKNFNAKPALTY 158 (965)
Q Consensus 81 ~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~a~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 158 (965)
+|||+|||||||||+|++++++|.+ |+++++|+|+|.|.|.++++ ..+..++..+ ++....+.
T Consensus 105 GRLD~dTeGLLLLTnDG~la~rL~~--P~~~~~K~Y~v~v~g~~~~~~l~~l~~Gv~l~-------------d~~~~~~~ 169 (248)
T COG1187 105 GRLDKDTEGLLLLTNDGELAHRLMH--PSSEVEKEYLVRVEGPVTEEDLEKLRKGVTLD-------------DGETKPAK 169 (248)
T ss_pred cccCCCCeeEEEEeCCHHHHHHhcC--CCCCCCEEEEEEEecCCCHHHHHHHhCCcEec-------------Ccccccce
Confidence 9999999999999999999999999 99999999999999988764 2444444443 21122222
Q ss_pred EEEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCCceecCCC
Q psy8199 159 YERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGHGIVGDNL 203 (965)
Q Consensus 159 ~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~pi~gD~~ 203 (965)
+-.+... ...+.|+++++|.+||+||||+||+++|+||+.=..
T Consensus 170 ~~~l~~~--~~~~~s~~~itl~EGrnrQVRRm~~a~G~~V~~L~R 212 (248)
T COG1187 170 PASLEKE--PGKNNSWLRITLTEGRNRQVRRMFEAVGLEVLRLKR 212 (248)
T ss_pred eEEEEec--CCCCceEEEEEEeCCcCHHHHHHHHHcCCEEeEEEE
Confidence 1111111 012579999999999999999999999999976443
No 149
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.93 E-value=1e-23 Score=241.23 Aligned_cols=335 Identities=16% Similarity=0.172 Sum_probs=233.2
Q ss_pred eEEEecCCcccccccccchhccCCC-CCHHHHHHHHHHHhhcccc-c---cCCCCcHHHHHHHHHHHhhcCCCCCeEEEc
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV-M---LSNLTHKPVIKLSEKLSSLTQYKLGHCFYG 320 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~av~~~~~~~~~~-~---~~~~~~~~~~~la~~l~~~~~~~~~~v~~~ 320 (965)
.++||.+|+.|+|+.++ .++|| .+|++.+++.+++++..+. . ...+..+...++++.+++.++. +..+++
T Consensus 34 ~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~--~~~i~~ 108 (397)
T PRK06939 34 ADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT--EDAILY 108 (397)
T ss_pred ceEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC--CcEEEE
Confidence 68999999999999875 45788 5899999999998764321 1 1234567888999999999863 344555
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCCh
Q psy8199 321 SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA 400 (965)
Q Consensus 321 ~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (965)
++|++|+..+++... .+++.|++.++.|.+........+. ....++.
T Consensus 109 tsG~~a~~~~~~~l~--------~~gd~vi~~~~~~~~~~~~~~~~~~-------------~~~~~~~------------ 155 (397)
T PRK06939 109 SSCFDANGGLFETLL--------GKEDAIISDALNHASIIDGVRLCKA-------------KRYRYAN------------ 155 (397)
T ss_pred cChHHHHHHHHHHhC--------CCCCEEEEEhhhhHHHHHHHHhcCC-------------ceEEeCC------------
Confidence 567999999887653 2567899988888665332221111 1222221
Q ss_pred hHHHHHHHHHHHHHHHhC---CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc-CC-Ccccccc
Q psy8199 401 NEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GC-GRTGKFF 475 (965)
Q Consensus 401 ~~~~~~d~~~le~~l~~~---~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~-gr~G~~~ 475 (965)
.|++++++.+++. ..++++|++++ +++++|...+ +++|.++|++||+++|+||+|+ |+ ++.|. +
T Consensus 156 -----~d~~~l~~~i~~~~~~~~~~~~v~~~~-v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~-~ 224 (397)
T PRK06939 156 -----NDMADLEAQLKEAKEAGARHKLIATDG-VFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGR-G 224 (397)
T ss_pred -----CCHHHHHHHHHhhhccCCCCeEEEEec-CcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-C
Confidence 2567777777542 22678899998 8899997655 9999999999999999999995 33 22332 1
Q ss_pred cccccCC--Cccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccH
Q psy8199 476 ACEHAEI--WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNI 550 (965)
Q Consensus 476 ~~~~~~~--~pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~ 550 (965)
.....++ .+|++ +|||+++| +++|++++++++++.+... ..++.. +.+.++..++++.++++.+.+ +++
T Consensus 225 ~~~~~~~~~~~~i~~~S~sK~~~g--~r~G~v~~~~~~~~~l~~~--~~~~~~--~~~~~~~~~~a~~~al~~~~~~~~~ 298 (397)
T PRK06939 225 TVEHFGVMDRVDIITGTLGKALGG--ASGGYTAGRKEVIDWLRQR--SRPYLF--SNSLAPAIVAASIKVLELLEESDEL 298 (397)
T ss_pred HHHHcCCCCCCcEEEEECHHHhCc--cCceEEEeCHHHHHHHHHh--Cccccc--cCCCCHHHHHHHHHHHHHHhcCHHH
Confidence 2333454 45777 78999965 4889999999999888641 111212 223456677888888887754 356
Q ss_pred HHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--------CCEEE
Q psy8199 551 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVY 622 (965)
Q Consensus 551 ~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR 622 (965)
.++++++.+++.+.|+++ ++....+.+.++.+.+. + .....++.+.|.++||.+.+. .+.+|
T Consensus 299 ~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iR 368 (397)
T PRK06939 299 RDRLWENARYFREGMTAA----GFTLGPGEHPIIPVMLG--D----AKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIR 368 (397)
T ss_pred HHHHHHHHHHHHHHHHHc----CCCcCCCCCCEEEEEEC--C----HHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEE
Confidence 788888889998888765 22223455666655442 1 112456888899999988642 25799
Q ss_pred EeCCcccCHHHHHHHHHhhhccc
Q psy8199 623 LMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 623 ~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+++++.+++++++++++++...+
T Consensus 369 i~~~~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 369 TQMSAAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred EEECCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999987644
No 150
>PRK10700 23S rRNA pseudouridylate synthase B; Provisional
Probab=99.93 E-value=1.5e-25 Score=237.26 Aligned_cols=143 Identities=17% Similarity=0.212 Sum_probs=108.8
Q ss_pred ecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcC
Q psy8199 34 EDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQ 113 (965)
Q Consensus 34 e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~ 113 (965)
|++.|+++|||+|++|++.+.....++++++.... ..++++|||||++||||||||+|++++++|++ ++++++
T Consensus 65 e~~~ylvlnKP~G~~~s~~d~~~~~tv~d~l~~~~-----~~~~~~VgRLD~dTsGLLLlTndg~~~~~L~~--p~~~i~ 137 (289)
T PRK10700 65 QICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLR-----GARWIAVGRLDVNTCGLLLFTTDGELANRLMH--PSREVE 137 (289)
T ss_pred cCCeEEEEECCCCCEeecCCCCCCccHHHHhhhhc-----CCceeEccCCCCCCceEEEEEcCHHHHHHHhC--ccCCCC
Confidence 44679999999999999887666679999886532 13578999999999999999999999999998 899999
Q ss_pred eEEEEEEcCccCCCce--EeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHH
Q psy8199 114 RKYLAMVWGIPKLNGM--INAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHM 191 (965)
Q Consensus 114 K~Y~a~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~ 191 (965)
|+|+|+|.|.++++.. +..++..+ ++. +.+..+... ......++++|+|.|||+||||+||
T Consensus 138 K~Y~v~V~G~~~~~~l~~l~~Gv~l~-------------~~~---~~~~~v~~~-~~~~~~s~l~v~L~EGk~hQIRrm~ 200 (289)
T PRK10700 138 REYAVRVFGQVDDAKLRQLSRGVQLE-------------DGP---AAFKTIKFS-GGEGINQWYNVTLTEGRNREVRRLW 200 (289)
T ss_pred eEEEEEEccCCCHHHHHHHHcCCEeC-------------Cce---eeeEEEEec-cCCCCceEEEEEEeCCccHHHHHHH
Confidence 9999999998865421 22222221 111 222222211 0013458999999999999999999
Q ss_pred HHhCCceec
Q psy8199 192 QWLGHGIVG 200 (965)
Q Consensus 192 ~~~g~pi~g 200 (965)
+++|+||+.
T Consensus 201 ~~lG~~V~~ 209 (289)
T PRK10700 201 EAVGVQVSR 209 (289)
T ss_pred HHcCCEEeE
Confidence 999999975
No 151
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.92 E-value=2.7e-23 Score=234.56 Aligned_cols=329 Identities=16% Similarity=0.147 Sum_probs=227.9
Q ss_pred eEEEecCCcccccccccchhccCCC-CCHHHHHHHHHHHhhcccc-c---cCCCCcHHHHHHHHHHHhhcCCCCCeEEEc
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV-M---LSNLTHKPVIKLSEKLSSLTQYKLGHCFYG 320 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~av~~~~~~~~~~-~---~~~~~~~~~~~la~~l~~~~~~~~~~v~~~ 320 (965)
.++. .+|++||||.+| .+||+ .+|++++++.+++...... + ...+.++...++++.++++++ .+..+++
T Consensus 9 ~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~--~~~~i~~ 82 (360)
T TIGR00858 9 PEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG--TEAALLF 82 (360)
T ss_pred CeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC--CCCEEEE
Confidence 4565 799999999987 57996 7899999999998764321 1 112345678889999999885 3456666
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCCh
Q psy8199 321 SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA 400 (965)
Q Consensus 321 ~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (965)
++|++++..+++.+. .+++.|++.++.|... .......+ ..+..++.
T Consensus 83 ~~G~~~~~~~l~~~~--------~~gd~v~~~~~~~~~~-~~~~~~~g------------~~~~~~~~------------ 129 (360)
T TIGR00858 83 SSGYLANVGVISALV--------GKGDLILSDALNHASL-IDGCRLSG------------ARVRRYRH------------ 129 (360)
T ss_pred CchHHHHHHHHHHhC--------CCCCEEEEEccccHHH-HHHHHhcC------------CceEEecC------------
Confidence 778999888776552 2456777766655433 22222222 12222222
Q ss_pred hHHHHHHHHHHHHHHHhCC-CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc--cccc
Q psy8199 401 NEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFAC 477 (965)
Q Consensus 401 ~~~~~~d~~~le~~l~~~~-~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~~~ 477 (965)
.|+++|++.+++.. .++++|++++ +++++|...+ +++|.++|+++|+++|+||+|+ +|..+. ....
T Consensus 130 -----~d~~~l~~~~~~~~~~~~~~v~~~~-~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~~~~~~~~ 198 (360)
T TIGR00858 130 -----NDVEHLERLLEKNRGERRKLIVTDG-VFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLGEDGRGTL 198 (360)
T ss_pred -----CCHHHHHHHHHHcccCCCeEEEEeC-CccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcCCCCCchH
Confidence 26788888886542 3578888998 8899998776 8999999999999999999996 444332 1123
Q ss_pred cccCCCcc-----eeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHH
Q psy8199 478 EHAEIWPD-----FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNIL 551 (965)
Q Consensus 478 ~~~~~~pD-----ivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~ 551 (965)
..+++.|| +.+|||++++ +.|++++++++++.+... ... +..+.+.++.+++++.++|+.+.. +...
T Consensus 199 ~~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 271 (360)
T TIGR00858 199 EHFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLINR--ART--LIFSTALPPAVAAAALAALELIQEEPWRR 271 (360)
T ss_pred HhcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHHh--Ccc--ceecCCCCHHHHHHHHHHHHHHhhCHHHH
Confidence 34555544 4579998865 337888999988877531 111 122334678888888899987654 3567
Q ss_pred HHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--------CCEEEE
Q psy8199 552 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYL 623 (965)
Q Consensus 552 ~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR~ 623 (965)
++++++.+++.+.|+++ ++....+.|.++.+.+. . .....++.+.|.++||++.+. ++.+|+
T Consensus 272 ~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRi 341 (360)
T TIGR00858 272 EKLLALIARLRAGLEAL----GFTLMPSCTPIVPVIIG--D----NASALALAEELQQQGIFVGAIRPPTVPAGTSRLRL 341 (360)
T ss_pred HHHHHHHHHHHHHHHHc----CCccCCCCCCEEEEEeC--C----HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEE
Confidence 88999999999999775 22233455777777663 1 112446888899999999641 258999
Q ss_pred eCCcccCHHHHHHHHHhh
Q psy8199 624 MPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 624 ~p~~~~t~~~i~~~~~~l 641 (965)
+++..+++++++++++++
T Consensus 342 s~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 342 TLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred EEcCCCCHHHHHHHHHhh
Confidence 999999999999999876
No 152
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=3.1e-23 Score=231.75 Aligned_cols=336 Identities=15% Similarity=0.093 Sum_probs=238.6
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhcc-ccccCCCCcHHHHHHHHHHHhhcCC--CCCe-EEEcCChhHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQY--KLGH-CFYGSDGASAVEV 329 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~~--~~~~-v~~~~sGseA~~~ 329 (965)
...+|+..|.. --..++.+.+++.+++.... +|+...+..++++.+++++.+..+. ..++ |+.|+|+++|+..
T Consensus 28 ~~vi~l~iG~P---d~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIGEP---DFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCCCC---CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 36788877633 22257889999999998864 5556778888899999999988752 3444 9999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCC--CCCCCCCCChhHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCA 407 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 407 (965)
++..... ++++||+++|+|..+.......++. .+.+|... ..+. -|
T Consensus 105 ~~~a~~~--------pGDeVlip~P~Y~~y~~~~~~~gg~-------------~v~v~l~~~~~~f~-----------~d 152 (393)
T COG0436 105 AFLALLN--------PGDEVLIPDPGYPSYEAAVKLAGGK-------------PVPVPLDEEENGFK-----------PD 152 (393)
T ss_pred HHHHhcC--------CCCEEEEeCCCCcCHHHHHHhcCCE-------------EEEEeCCcCccCCc-----------CC
Confidence 9987764 6788999999998886665555552 23333211 1111 27
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-c-ccccccCCCcc
Q psy8199 408 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-F-FACEHAEIWPD 485 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~-~~~~~~~~~pD 485 (965)
+++|++++.+ ++.+|+++. ++|++|.+. ++++|++|.++|++||+++|+||+|.+|...|. + ...+..+..-.
T Consensus 153 ~~~l~~~i~~---ktk~i~ln~-P~NPTGav~-~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~ 227 (393)
T COG0436 153 LEDLEAAITP---KTKAIILNS-PNNPTGAVY-SKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDR 227 (393)
T ss_pred HHHHHhhcCc---cceEEEEeC-CCCCcCcCC-CHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcce
Confidence 8999988863 566666655 599999876 888899999999999999999999999988774 2 22222222112
Q ss_pred ee---eeccccCCCcccceeeeec-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccH----HHHHHHH
Q psy8199 486 FL---CLSKGITGGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI----LQRISQD 557 (965)
Q Consensus 486 iv---t~sK~l~gG~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~----~~~~~~~ 557 (965)
.+ +|||..+-.+|++|+++++ +++++.+.. +....+++.+.++|.+|.++|+.-.+.+. .+..+++
T Consensus 228 ~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~------~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~r 301 (393)
T COG0436 228 TITINSFSKTYGMTGWRIGWVVGPPEELIAALRK------LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRER 301 (393)
T ss_pred EEEEecccccccccccceeEeecChHHHHHHHHH------HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 33 5899544322999999998 888887764 34456668899999999999974322122 2445666
Q ss_pred HHHHHHHHHcccCCCceeeee-ceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec--------CCEEEEeCCc
Q psy8199 558 MKKITKALTSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI--------GNTVYLMPPY 627 (965)
Q Consensus 558 ~~~l~~~L~~l~~~~~i~~v~-g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~--------~~~lR~~p~~ 627 (965)
++.+.+.|.++ +++..+. +.|.|+.+... ....+ ...|+..|+ +.||.+.|+ .+++|++ +
T Consensus 302 rd~l~~~l~~~---~g~~~~~~p~Ga~Y~~~~i-~~~~d----~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~ 371 (393)
T COG0436 302 RDLLVEALNEI---GGLSVVKPPEGAFYLFPKI-PELLD----SEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--L 371 (393)
T ss_pred HHHHHHHHHhc---CCeeeccCCCeeEEEEeec-CCCCC----HHHHHHHHHHhCCEEEecccccCCCCCCCeEEEE--E
Confidence 66666666554 5577677 77998888755 11111 334555555 668999883 1589999 8
Q ss_pred ccCHHHHHHHHHhhhccc
Q psy8199 628 ILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~~~ 645 (965)
..+.+.++++++++.+.+
T Consensus 372 ~~~~~~l~~a~~rl~~~~ 389 (393)
T COG0436 372 ATSEETLEEALRRLARFL 389 (393)
T ss_pred ecCHHHHHHHHHHHHHHH
Confidence 888899999998887644
No 153
>PRK12928 lipoyl synthase; Provisional
Probab=99.91 E-value=3.7e-23 Score=218.97 Aligned_cols=229 Identities=20% Similarity=0.283 Sum_probs=181.4
Q ss_pred HHHHHhc-CCCchhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHH
Q psy8199 649 DEVINLF-NLPFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKA 727 (965)
Q Consensus 649 ~e~l~l~-~~~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~ 727 (965)
.++..|+ +.++..++..|+..++...+++... +.+.+ |++|+++|.||+++. +. .+ .++++++++.++++
T Consensus 29 ~~~~~l~~~~~l~tv~~~A~~~~~~~~~~~~~~--tfv~i-s~gC~~~C~FCa~~~--g~---~~-~~~~eei~~~a~~~ 99 (290)
T PRK12928 29 ETVQRLVKQRRLHTICEEARCPNRGECYAQGTA--TFLIM-GSICTRRCAFCQVDK--GR---PM-PLDPDEPERVAEAV 99 (290)
T ss_pred HHHHHHHHcCCHHHHHHHhCCCcccccCCCCEE--EEEEe-cccccCcCCCCCccC--CC---CC-CCCHHHHHHHHHHH
Confidence 3445555 4478999999999988887533222 22334 999999999999886 22 23 38999999999999
Q ss_pred HHCCCCEEEEeeccCC-CCcccHHHHHHHHHHHHhcC--cEeEE-ecCCC--CHHHHHHHHHhCCCeEeccCCCCHHHHh
Q psy8199 728 KSDGATRFCMGAAWRE-LKDRDLDNIENMICEVKKIG--LETCL-TLGML--NENQAYRLKKVGLDYYNHNLDTSPKLYG 801 (965)
Q Consensus 728 ~~~g~~~i~l~~g~~~-~~~~~~~~~~~~~~~i~~~~--~~i~~-~~~~~--~~e~l~~Lk~aG~~~i~i~~es~~~~~~ 801 (965)
.+.|+++++|+++..+ +.+.+.+++.++++.|++.. +.+.. +...+ ..+.++.|+++|.+.+.+++||++++++
T Consensus 100 ~~~G~keivitg~~~dDl~d~g~~~~~ell~~Ik~~~p~~~I~~ltp~~~~~~~e~L~~l~~Ag~~i~~hnlEt~~~vl~ 179 (290)
T PRK12928 100 AALGLRYVVLTSVARDDLPDGGAAHFVATIAAIRARNPGTGIEVLTPDFWGGQRERLATVLAAKPDVFNHNLETVPRLQK 179 (290)
T ss_pred HHCCCCEEEEEEEeCCcccccCHHHHHHHHHHHHhcCCCCEEEEeccccccCCHHHHHHHHHcCchhhcccCcCcHHHHH
Confidence 9999999999998653 23455788999999999753 44433 33333 5789999999999999999999999999
Q ss_pred cccCCCCHHHHHHHHHHHHHcC--CceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeecccccc--CCCCCCCCCCC
Q psy8199 802 DIISTRDYENRLNTLKNVRNVG--INICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQI--KGTPLYGSSIL 877 (965)
Q Consensus 802 ~i~~~~~~~~~~~~i~~~~~~G--i~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~--~gT~l~~~~~~ 877 (965)
.|++..+++++++.++.+++.| +.+++++|+|+|||.+|+.++++.+++++ ++.+++..|.+. ...|...+ .
T Consensus 180 ~m~r~~t~e~~le~l~~ak~~gp~i~~~s~iIvG~GET~ed~~etl~~Lrel~--~d~v~i~~Yl~p~~~~~~v~~~--~ 255 (290)
T PRK12928 180 AVRRGADYQRSLDLLARAKELAPDIPTKSGLMLGLGETEDEVIETLRDLRAVG--CDRLTIGQYLRPSLAHLPVQRY--W 255 (290)
T ss_pred HhCCCCCHHHHHHHHHHHHHhCCCceecccEEEeCCCCHHHHHHHHHHHHhcC--CCEEEEEcCCCCCccCCceeec--c
Confidence 9999999999999999999999 99999999999999999999999999999 999999888763 34555554 3
Q ss_pred CHHHHHHHHHHHH
Q psy8199 878 DPLEFIRTIAVAR 890 (965)
Q Consensus 878 ~~~~~~~~ia~~R 890 (965)
+++++.+.-.++.
T Consensus 256 ~~~~f~~~~~~~~ 268 (290)
T PRK12928 256 TPEEFEALGQIAR 268 (290)
T ss_pred CHHHHHHHHHHHH
Confidence 4554444444433
No 154
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=2.9e-22 Score=225.47 Aligned_cols=318 Identities=13% Similarity=0.150 Sum_probs=214.1
Q ss_pred ccccccccchhccCCCC-CHHHHHHHHHHHhhcc-------ccccCC----CCcHHHHHHHHHHHhhcCCCCCeEEEcCC
Q psy8199 255 RYLDAISSWWVNLFGHS-NSYINKALKNQLNKLE-------HVMLSN----LTHKPVIKLSEKLSSLTQYKLGHCFYGSD 322 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~-------~~~~~~----~~~~~~~~la~~l~~~~~~~~~~v~~~~s 322 (965)
+++||.|+ .+||++ +|.+.+++.+++.+.. ...... +.++...+++++++++++ .+.+++.+|
T Consensus 5 ~~~~~~s~---~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~--~~~~l~~~s 79 (370)
T PRK05937 5 LSIDFVTN---DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG--APEAFIVPS 79 (370)
T ss_pred ceEEeECC---CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC--CCeEEEECC
Confidence 46666654 557765 8999999999887741 111111 256788999999999996 367788899
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhH
Q psy8199 323 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 402 (965)
Q Consensus 323 GseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (965)
|+.|+...+... .+++.+|+.+..+|++...++.... .. . ++++
T Consensus 80 G~~a~~~~~~~~---------~~~~d~ii~d~~~H~sv~~~~~~~~--~~----------~--~~~~------------- 123 (370)
T PRK05937 80 GYMANLGLCAHL---------SSVTDYVLWDEQVHISVVYSLSVIS--GW----------H--QSFR------------- 123 (370)
T ss_pred hHHHHHHHHHHh---------CCCCCEEEEEhhhhHHHHHHHHHcC--Cc----------e--EEec-------------
Confidence 999986433322 2456789999999999877655421 00 0 1111
Q ss_pred HHHHHHHHHHHHHHhC---CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc-C-CCcccccccc
Q psy8199 403 IARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-G-CGRTGKFFAC 477 (965)
Q Consensus 403 ~~~~d~~~le~~l~~~---~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~ 477 (965)
.+|+++|++++++. .++..+|++++ +++++|.+.| +++|.++|+++|+++|+||+|+ | +|++|..+.
T Consensus 124 --~~d~~~l~~~l~~~~~~~~~~~~v~v~~-v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~- 195 (370)
T PRK05937 124 --HNDLDHLESLLESCRQRSFGRIFIFVCS-VYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFC- 195 (370)
T ss_pred --CCCHHHHHHHHHhhhccCCCcEEEEEec-CCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchH-
Confidence 14788899888743 13456788899 9999999998 9999999999999999999997 3 455554322
Q ss_pred cccC---CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhccc--HHH
Q psy8199 478 EHAE---IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN--ILQ 552 (965)
Q Consensus 478 ~~~~---~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~--~~~ 552 (965)
..++ +.+|+.||||++|+.+ +++++.+++.+.+... ..++. .+.+.+|++++++.++++.+.+.. ..+
T Consensus 196 ~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~~~~~~~~~~~--~~~~~--~s~~~~~~~~~a~~aal~~l~~~~~~~~~ 268 (370)
T PRK05937 196 HSLGYENFYAVLVTYSKALGSMG---AALLSSSEVKQDLMLN--SPPLR--YSTGLPPHLLISIQVAYDFLSQEGELARK 268 (370)
T ss_pred HhhCCCCCcEEEEechhhhhcCc---eEEEcCHHHHHHHHHh--CCCCe--ecCCCCHHHHHHHHHHHHHHHhCcHHHHH
Confidence 1222 2367789999886521 3456666665555421 12222 344578888888889999886432 456
Q ss_pred HHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee----cCCEEEEeCCcc
Q psy8199 553 RISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----IGNTVYLMPPYI 628 (965)
Q Consensus 553 ~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~~~~lR~~p~~~ 628 (965)
+++++.+++.+.|... .+ +....+.+. . . ....+.+.|.++||++.. ..+.+|++++..
T Consensus 269 ~l~~l~~~l~~~l~~~--~~--------~~~~~i~~~--~----~-~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~ 331 (370)
T PRK05937 269 QLFRLKEYFAQKFSSA--AP--------GCVQPIFLP--G----I-SEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAF 331 (370)
T ss_pred HHHHHHHHHHHhcCCC--CC--------CCEEEEEeC--C----h-hHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCC
Confidence 6667777776665431 01 111223332 1 1 134677888999998873 346899999999
Q ss_pred cCHHHHHHHHHhhhccc
Q psy8199 629 LNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~~~ 645 (965)
+|++|++++++.+.+.+
T Consensus 332 ~t~edid~l~~~L~~~~ 348 (370)
T PRK05937 332 NTEDEVDILVSVLATYL 348 (370)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999887644
No 155
>cd02554 PseudoU_synth_RluF PseudoU_synth_RluF_like: Pseudouridine synthase, Escherichia coli RluF like. This group is comprised of bacterial proteins similar to Escherichia coli RluF. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E.coli RluF makes psi2604 in 23S RNA. psi2604 has only been detected in E. coli. It is absent from other eubacteria despite a precursor U at that site and from eukarya and archea which lack a precursor U at that site.
Probab=99.90 E-value=6.9e-24 Score=203.85 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=102.5
Q ss_pred EEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEE
Q psy8199 38 IIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYL 117 (965)
Q Consensus 38 ~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~ 117 (965)
|+++|||+|++|++++. ...++.+.+.. ..++++|||||++||||||||+|++++++|++ +.+++.|+|+
T Consensus 2 y~~lnKP~G~l~s~~~~-~~~tv~~~l~~-------~~~~~~vgRLD~~tsGlll~t~dg~~~~~L~~--p~~~~~K~Y~ 71 (164)
T cd02554 2 YIAYNKPVGIDCTLERA-DEDNIIDFVNP-------PPRIFPIGRLDKDSEGLILLTNDGDLVNKILH--ADNNHEKEYL 71 (164)
T ss_pred EEEEECCCCcEeecCCC-CCCcHHHHhcC-------cCCEEEccCCCCCCeeEEEEEcCHHHHHHHhh--hhcCCCeEEE
Confidence 89999999999998754 35788888743 13689999999999999999999999999988 8889999999
Q ss_pred EEEcCccCCCc--eEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhC
Q psy8199 118 AMVWGIPKLNG--MINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLG 195 (965)
Q Consensus 118 a~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g 195 (965)
|.|+|.++++. .+..++..+ + ..|.+..+... ++ ++++|.+.+||+||||+||+++|
T Consensus 72 V~v~~~l~~~~l~~l~~G~~~~-------------~---~~~~~~~v~~~----~~-~~l~i~l~eGr~~qIRrm~~~~G 130 (164)
T cd02554 72 VTVNKPITDEFIEGMSNGVVIL-------------G---TVTKPCKVERL----AK-DKFRIVLTQGLNRQIRRMCEALG 130 (164)
T ss_pred EEECCCCCHHHHHHHhCCCEEC-------------C---eEEcceEEEEC----CC-CEEEEEEECCcCHHHHHHHHHcC
Confidence 99999887642 122222111 1 12222222221 11 35999999999999999999999
Q ss_pred CceecCCC
Q psy8199 196 HGIVGDNL 203 (965)
Q Consensus 196 ~pi~gD~~ 203 (965)
+||+-=..
T Consensus 131 ~~V~~L~R 138 (164)
T cd02554 131 YRVTDLKR 138 (164)
T ss_pred CEEEEEEE
Confidence 99986443
No 156
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=2.8e-22 Score=226.07 Aligned_cols=323 Identities=12% Similarity=0.109 Sum_probs=214.8
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhh----ccccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNK----LEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVE 328 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~----~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~ 328 (965)
..+|+..+ .++++ .+|.+++++.+++.. ...|.. .+..+.+..+++.+.+..+ .+.++|++|+|+++++.
T Consensus 27 ~~i~l~~~--~~~~~-~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~ 102 (368)
T PRK03317 27 VPVRLNTN--ENPYP-PSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQ 102 (368)
T ss_pred ceeEecCC--CCCCC-CCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHH
Confidence 46777666 34454 688999999988753 222221 1223445555555555433 45679999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.+++.... +++.|++..++|+++...+...+ .....++..+.. . .|+
T Consensus 103 ~~~~~~~~--------~gd~v~v~~P~y~~~~~~~~~~g-------------~~~~~~~~~~~~-~-----------~d~ 149 (368)
T PRK03317 103 QLLQAFGG--------PGRTALGFVPSYSMHPIIARGTH-------------TEWVEGPRAADF-T-----------LDV 149 (368)
T ss_pred HHHHHhcC--------CCCEEEEeCCChHHHHHHHHhcC-------------CeeEEcccCCCC-C-----------CCH
Confidence 99987743 56789999999988743322211 112222211111 1 267
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee-
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL- 487 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv- 487 (965)
+++++++.+...+ +.++++| +|++|.+.+ .++++++|+.+++++|+||+|++|++.|........+..|+++
T Consensus 150 ~~l~~~~~~~~~~-~i~l~~p--~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~ 222 (368)
T PRK03317 150 DAAVAAIAEHRPD-VVFLTSP--NNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVV 222 (368)
T ss_pred HHHHHHHhccCCC-EEEEeCC--CCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEE
Confidence 8888888643222 3445555 899999886 6677777777789999999999997666544445555567877
Q ss_pred --eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHH
Q psy8199 488 --CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITK 563 (965)
Q Consensus 488 --t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~~~~~~~l~~ 563 (965)
+|||+++ .| +|+|++++++++++.+.. ...+++.++++++++.++|+.... .+..++++++.+++.+
T Consensus 223 ~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~--------~~~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~ 293 (368)
T PRK03317 223 SRTMSKAFAFAG-GRLGYLAAAPAVVDALRL--------VRLPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVA 293 (368)
T ss_pred EEechhhhccch-hhhhhhhCCHHHHHHHHh--------cCCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 8999997 46 899999999999998865 124677899999999999964321 1122334445555555
Q ss_pred HHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC--CEEEEeCCcccCHHHHHHHHHhh
Q psy8199 564 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 564 ~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
.|++. ++....+.|.++.+... .+ ...+.+.|.++||++.+.+ +++|++ ..+.++++.+++++
T Consensus 294 ~L~~~----g~~~~~~~~~~~~~~~~-~~-------~~~~~~~l~~~Gv~v~~~~~~~~iRi~---~~~~~~~~~~~~~l 358 (368)
T PRK03317 294 WLREL----GLRVAPSDANFVLFGRF-AD-------RHAVWQGLLDRGVLIRDVGIPGWLRVT---IGTPEENDAFLAAL 358 (368)
T ss_pred HHHHC----CCEeCCCCCcEEEEecc-CC-------HHHHHHHHHHCCEEEEeCCCCCeEEEe---cCCHHHHHHHHHHH
Confidence 55442 34445566776655221 11 3467788999999998754 699999 34778899888888
Q ss_pred hccc
Q psy8199 642 FQTF 645 (965)
Q Consensus 642 ~~~~ 645 (965)
.+.+
T Consensus 359 ~~~~ 362 (368)
T PRK03317 359 AEVL 362 (368)
T ss_pred HHHH
Confidence 7654
No 157
>PRK10475 23S rRNA pseudouridine synthase F; Provisional
Probab=99.90 E-value=6.1e-24 Score=223.76 Aligned_cols=137 Identities=22% Similarity=0.196 Sum_probs=104.6
Q ss_pred EecCcEEEEECCCCCeeeeCCCCCcccHHHHHHHHCCcccCCCCccccccCCCCCceEEEeEeCHHHHHHHHHHHHcCCc
Q psy8199 33 YEDNEIIILNKSAGLVVHPAIGNLSGTLFDNLLEIYPFLINVPRAGIVHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIV 112 (965)
Q Consensus 33 ~e~~~~lv~nKP~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~ 112 (965)
+||++|+++|||+|++|++.+.. ..++++.+... .++++|||||++||||||||+|++++++|++ +.+.+
T Consensus 64 ~ed~~~lvlnKP~G~~~~~~~~~-~~tv~~~l~~~-------~~l~~VgRLDrdTsGLLLlT~dg~~~~~L~~--p~~~i 133 (290)
T PRK10475 64 AEDLVLIALNKPVGIVSTTEDGE-RDNIVDFVNHS-------KRVFPIGRLDKDSQGLIFLTNHGDLVNKILR--AGNDH 133 (290)
T ss_pred cCCCeEEEEECCCCCCcCCCCCC-CCcHHHHhhcc-------ccccccccCCCCCcceEEEecCHHHHHHhhC--cCCCC
Confidence 46788999999999999976653 57888877532 2678999999999999999999999999998 78899
Q ss_pred CeEEEEEEcCccCCCc--eEeeccccCCCCCeeEEEccCCCCcceEEEEEEeEEeeccCCcEEEEEEEeCCCcccHHHHH
Q psy8199 113 QRKYLAMVWGIPKLNG--MINAAIMRNPHNRIKMTVSKNFNAKPALTYYERLATGIINKKHISLIRCNLKTGRTHQIRVH 190 (965)
Q Consensus 113 ~K~Y~a~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~ 190 (965)
+|+|+|+|.|.++++. .+..++..+.. ..+++.. +.+ +.++++|+|.+||+||||+|
T Consensus 134 ~K~Y~v~V~g~~~~~~l~~l~~Gv~l~~~-----------~~~~~~v--~~~--------~~~~~~i~l~eGk~rqIRrm 192 (290)
T PRK10475 134 EKEYLVTVDKPITDEFIRGMGAGVPILGT-----------VTKKCKV--KKE--------APFVFRITLVQGLNRQIRRM 192 (290)
T ss_pred CeEEEEEECCCCCHHHHHHHhCCcEECCE-----------EecceEE--Eec--------CCcEEEEEEECCcCHHHHHH
Confidence 9999999999886542 22222222100 0112111 111 13679999999999999999
Q ss_pred HHHhCCceec
Q psy8199 191 MQWLGHGIVG 200 (965)
Q Consensus 191 ~~~~g~pi~g 200 (965)
|+++|+||+-
T Consensus 193 ~~~~G~~V~~ 202 (290)
T PRK10475 193 CEHFGYEVTK 202 (290)
T ss_pred HHHcCCEEeE
Confidence 9999999974
No 158
>PRK05481 lipoyl synthase; Provisional
Probab=99.90 E-value=3.6e-22 Score=212.55 Aligned_cols=208 Identities=21% Similarity=0.314 Sum_probs=172.2
Q ss_pred ccHHHHHHhc-CCCchhHHHHHHHHHHHh-cCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHH
Q psy8199 646 NELDEVINLF-NLPFNDLLFRAQKVHRKY-FDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITA 723 (965)
Q Consensus 646 ~~~~e~l~l~-~~~~~~l~~~a~~~~~~~-~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~ 723 (965)
.+..+++.|+ ..++..++..|+.+++.. +.++++. .+.+ |++|+++|.||+++... . +.+++++|+++
T Consensus 19 ~~~~~~~~l~~~~~l~~~~~~a~~~~~~~~~~~~~~~---fi~i-s~GC~~~C~FC~i~~~r--~----~s~~~eeI~~e 88 (289)
T PRK05481 19 EEYTEIKKLLRELGLHTVCEEASCPNIGECWSRGTAT---FMIL-GDICTRRCPFCDVATGR--P----LPLDPDEPERV 88 (289)
T ss_pred hhHHHHHHHHHhCChHHHHHhhCCCcchhccCCCeEE---EEEe-cccccCCCCCceeCCCC--C----CCCCHHHHHHH
Confidence 3566777887 457899999999998833 2255433 2335 99999999999988632 1 34889999999
Q ss_pred HHHHHHCCCCEEEEeeccCC-CCcccHHHHHHHHHHHHhc--CcEeEE--ecCCCCHHHHHHHHHhCCCeEeccCCCCHH
Q psy8199 724 AQKAKSDGATRFCMGAAWRE-LKDRDLDNIENMICEVKKI--GLETCL--TLGMLNENQAYRLKKVGLDYYNHNLDTSPK 798 (965)
Q Consensus 724 ~~~~~~~g~~~i~l~~g~~~-~~~~~~~~~~~~~~~i~~~--~~~i~~--~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~ 798 (965)
++++.+.|+++++|+++..+ ....+.+.+.++++.|++. ++.+.. .......+.+..|+++|.+.+.+++|++++
T Consensus 89 a~~l~~~G~kEI~L~gg~~~d~~~~~~~~l~~Ll~~I~~~~p~irI~~l~~~~~~~~e~L~~l~~ag~~i~~~~~ets~~ 168 (289)
T PRK05481 89 AEAVARMGLKYVVITSVDRDDLPDGGAQHFAETIRAIRELNPGTTIEVLIPDFRGRMDALLTVLDARPDVFNHNLETVPR 168 (289)
T ss_pred HHHHHHCCCCEEEEEEeeCCCcccccHHHHHHHHHHHHhhCCCcEEEEEccCCCCCHHHHHHHHhcCcceeeccccChHH
Confidence 99999999999999999753 1223567899999999873 344332 223335689999999999999999999999
Q ss_pred HHhcccCCCCHHHHHHHHHHHHHc--CCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccc
Q psy8199 799 LYGDIISTRDYENRLNTLKNVRNV--GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ 865 (965)
Q Consensus 799 ~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P 865 (965)
+++.|+++++++++++.++.++++ |+.+++++|+|+|||+||+.++++++++++ ++.+.+..|.|
T Consensus 169 vlk~m~r~~t~e~~le~i~~ar~~~pgi~~~t~~IvGfGET~ed~~~tl~~lrel~--~d~v~if~Ys~ 235 (289)
T PRK05481 169 LYKRVRPGADYERSLELLKRAKELHPGIPTKSGLMVGLGETDEEVLEVMDDLRAAG--VDILTIGQYLQ 235 (289)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHhCCCCeEeeeeEEECCCCHHHHHHHHHHHHhcC--CCEEEEEccCC
Confidence 999999999999999999999999 999999999999999999999999999999 99999999998
No 159
>PTZ00413 lipoate synthase; Provisional
Probab=99.90 E-value=3.8e-22 Score=209.56 Aligned_cols=175 Identities=17% Similarity=0.291 Sum_probs=154.4
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccC-CCCcccHHHHHHHHHHHHh
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWR-ELKDRDLDNIENMICEVKK 761 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~-~~~~~~~~~~~~~~~~i~~ 761 (965)
+.|-. .+.|+.+|.||+++.... ...++++|+.+.++...++|++.++++++.. ++.+...+.+.+.++.|++
T Consensus 151 Tfmil-G~~CTr~C~FCaqstg~~-----p~~lD~eEp~~vA~av~~~Gl~~~VVTSv~RDDL~D~ga~~~a~~I~~Ir~ 224 (398)
T PTZ00413 151 TIMVM-GDHCTRGCRFCSVKTSRK-----PPPLDPNEPEKVAKAVAEMGVDYIVMTMVDRDDLPDGGASHVARCVELIKE 224 (398)
T ss_pred Eeeec-CCCCCCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHcCCCEEEEEEEcCCCCChhhHHHHHHHHHHHHc
Confidence 33434 899999999999986321 2458999999999999999999888877754 4667889999999999997
Q ss_pred --cCcEeEEecCCC--CHHHHHHHHHhCCCeEeccCCCCHHHHhcccC-CCCHHHHHHHHHHHHHc---CCceeeeEEEe
Q psy8199 762 --IGLETCLTLGML--NENQAYRLKKVGLDYYNHNLDTSPKLYGDIIS-TRDYENRLNTLKNVRNV---GINICCGGIIG 833 (965)
Q Consensus 762 --~~~~i~~~~~~~--~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~-~~~~~~~~~~i~~~~~~---Gi~v~~~~i~G 833 (965)
.++.+++..+.+ +++.++.|++||++.+++++||++++|.+|++ .++|++.+++++.+++. |+.+++++|+|
T Consensus 225 ~~p~~~IevligDf~g~~e~l~~L~eAG~dvynHNLETv~rLyp~VRt~~atYe~sLe~Lr~AKe~f~~gi~tcSGiIVG 304 (398)
T PTZ00413 225 SNPELLLEALVGDFHGDLKSVEKLANSPLSVYAHNIECVERITPYVRDRRASYRQSLKVLEHVKEFTNGAMLTKSSIMLG 304 (398)
T ss_pred cCCCCeEEEcCCccccCHHHHHHHHhcCCCEEecccccCHhHHHHHccCcCCHHHHHHHHHHHHHHhcCCceEeeeeEec
Confidence 368888888866 99999999999999999999999999999996 68999999999999987 99999999999
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCCceeeccccc
Q psy8199 834 LSESRDQRAELIFQLANLNPYPESVPINNLVQ 865 (965)
Q Consensus 834 l~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P 865 (965)
||||++|++++++.|++++ ++.+++..|..
T Consensus 305 LGET~eEvie~m~dLrelG--VDivtIGQYL~ 334 (398)
T PTZ00413 305 LGETEEEVRQTLRDLRTAG--VSAVTLGQYLQ 334 (398)
T ss_pred CCCCHHHHHHHHHHHHHcC--CcEEeeccccC
Confidence 9999999999999999999 99999955543
No 160
>PLN02483 serine palmitoyltransferase
Probab=99.89 E-value=2.1e-21 Score=224.00 Aligned_cols=327 Identities=14% Similarity=0.147 Sum_probs=220.0
Q ss_pred cCCcccccccccchhccCCCC--CHHHHHHHHHHHhhcccc---cc-CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChh
Q psy8199 251 FSGKRYLDAISSWWVNLFGHS--NSYINKALKNQLNKLEHV---ML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGA 324 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~--~p~v~~av~~~~~~~~~~---~~-~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGs 324 (965)
.+++++|+|.|. +.||.+ ++.+.+++.+++++.+.. +. ..++++...++.++++++++ .+..++.++|+
T Consensus 97 ~~~~~~~n~~s~---~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g--~~~ai~~~~G~ 171 (489)
T PLN02483 97 TKTRRCLNLGSY---NYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG--KPAAIVFGMGY 171 (489)
T ss_pred CCCceEEEeecC---CccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC--CCcEEEECCHH
Confidence 357889999875 667775 677888888888775321 11 12468889999999999996 34455557788
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
.++..++.... .+++.|++.++.|++.. .+....| ..+..++.
T Consensus 172 ~an~~~i~al~--------~~Gd~Vi~d~~~h~s~~-~~~~~~G------------a~v~~~~~---------------- 214 (489)
T PLN02483 172 ATNSTIIPALI--------GKGGLIISDSLNHNSIV-NGARGSG------------ATIRVFQH---------------- 214 (489)
T ss_pred HHHHHHHHHhC--------CCCCEEEEcchhhHHHH-HHHHHcC------------CeEEEEeC----------------
Confidence 88887776543 25577777776665543 2222222 12223332
Q ss_pred HHHHHHHHHHHHhC----------CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccC--CCccc
Q psy8199 405 RCAIFDLEILLKKN----------HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG--CGRTG 472 (965)
Q Consensus 405 ~~d~~~le~~l~~~----------~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G 472 (965)
+|.++|++++++. +....+|++|+ +.++.|.+.+ +++|.++|++||+++|+||+|+- +|++|
T Consensus 215 -~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~-v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G 288 (489)
T PLN02483 215 -NTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEG-IYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTG 288 (489)
T ss_pred -CCHHHHHHHHHhhhhccccccccCCceEEEEECC-CCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCC
Confidence 2445555555421 11246889999 8999998887 99999999999999999999971 34455
Q ss_pred ccccccccCCCc---cee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCC--CCCHHHHHHHHHHHHHH
Q psy8199 473 KFFACEHAEIWP---DFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY--SGNPLACCAALATLEIF 545 (965)
Q Consensus 473 ~~~~~~~~~~~p---Div--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~L~~~ 545 (965)
.. ..+++++.| |++ +|||++++ +.|++++++++++.+.. ..++.++ +.+|..++++.++|+.+
T Consensus 289 ~g-~~~~~~v~~~~~dI~~~SfSKs~g~---~GG~i~~~~~li~~l~~------~~~~~~~~~~~~p~~~~~~~aaL~~l 358 (489)
T PLN02483 289 RG-VCELLGVDPADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKR------TCPAHLYATSMSPPAVQQVISAIKVI 358 (489)
T ss_pred Cc-hHHhcCCCcccCcEEEEecchhccc---CceEEEcCHHHHHHHHH------hCccccccCCcCHHHHHHHHHHHHHH
Confidence 43 445666643 666 89998865 23788899999998875 1233333 34677777888889876
Q ss_pred hcc-------cHHHHHHHHHHHHHHHHHcccCCCceeeee-ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec
Q psy8199 546 NKD-------NILQRISQDMKKITKALTSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 617 (965)
Q Consensus 546 ~~~-------~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~-g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 617 (965)
..+ ...++++++.+++++.|+++ ++.... ..+.++.+.+. + ......+.+.|+++||.+.+.
T Consensus 359 ~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~----G~~v~~~~~sp~~~l~l~--~----~~~~~~~~~~Ll~~GI~v~~~ 428 (489)
T PLN02483 359 LGEDGTNRGAQKLAQIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLY--N----PAKIPAFSRECLKQNVAVVVV 428 (489)
T ss_pred HhCccccchHHHHHHHHHHHHHHHHHHHHC----CCcccCCCCCCEEEEEEC--C----HHHHHHHHHHHHHCCcEEeee
Confidence 522 24667888888999998875 222111 12334444433 1 112346888899999998742
Q ss_pred --------CCEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 618 --------GNTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 618 --------~~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
.+.+||+++..+++++++++++++.+..
T Consensus 429 ~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~ 464 (489)
T PLN02483 429 GFPATPLLLARARICISASHSREDLIKALEVISEVG 464 (489)
T ss_pred CCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 1579999999999999999999987643
No 161
>TIGR00093 pseudouridine synthase. This model identifies panels of pseudouridine synthase enzymes that RNA modifications involved in maturing the protein translation apparatus. Counts per genome vary: two in Staphylococcus aureus, three in Pseudomonas putida, four in E. coli, etc.
Probab=99.89 E-value=1.1e-23 Score=196.16 Aligned_cols=109 Identities=19% Similarity=0.264 Sum_probs=88.8
Q ss_pred cccCCCCCceEEEeEeCHHHHHHHHHHHHcCCcCeEEEEEEcCccCCCceEeeccccCCCCCeeEEEccCCCCcceEEEE
Q psy8199 80 VHRLDKNSSGLMVVAKSIKSYIHLVNQLKMHIVQRKYLAMVWGIPKLNGMINAAIMRNPHNRIKMTVSKNFNAKPALTYY 159 (965)
Q Consensus 80 v~RLD~~tsGlll~a~~~~~~~~l~~~~~~~~~~K~Y~a~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 159 (965)
|||||++||||||||||+++++.|++ ++++++|+|+|+|.|.++++. +. .+. . ...+ .+++.+.+.|
T Consensus 1 v~RLD~~TSGlll~akd~~~~~~L~~--~~~~i~K~Y~a~v~g~~~~~~-~~-~~~----~--g~~~---~~~~~~~~~~ 67 (128)
T TIGR00093 1 AGRLDRDSEGLLLLTNDGELVHRLTH--PGHHCEKTYLVTVEGPVTDED-LE-ALR----K--GVQL---EDGPTKPAKL 67 (128)
T ss_pred CCCCCCCCEEEEEEEeCHHHHHHHhC--CCCCCCeEEEEEECCCCCHHH-HH-HHh----C--CeEE---CCcEEeeeEE
Confidence 79999999999999999999999998 889999999999999886543 11 111 0 0111 1345677888
Q ss_pred EEeEEeeccCCcEEEEEEEeCCCcccHHHHHHHHhCCceecCCCCC
Q psy8199 160 ERLATGIINKKHISLIRCNLKTGRTHQIRVHMQWLGHGIVGDNLYG 205 (965)
Q Consensus 160 ~~~~~~~~~~~~~s~~~~~~~tGr~hQIR~~~~~~g~pi~gD~~~~ 205 (965)
+++... .+.++++|+|.|||+||||+||+++||||+||..+.
T Consensus 68 ~~l~~~----~~~~~l~~~l~tGR~HQIR~~~~~lG~pI~g~~R~~ 109 (128)
T TIGR00093 68 EVITEP----GFPTWLRITLSEGRNRQVRRMFAAVGFPVLRLHRVR 109 (128)
T ss_pred EEEccC----CCceEEEEEEeCCCCHHHHHHHHHcCCeEeEEEEEE
Confidence 888653 456899999999999999999999999999999885
No 162
>KOG1359|consensus
Probab=99.89 E-value=2.2e-21 Score=191.65 Aligned_cols=322 Identities=16% Similarity=0.189 Sum_probs=233.3
Q ss_pred cccccccccchhccCCCC-CHHHHHHHHHHHhhccc----cccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEH----VMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVE 328 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~~----~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~ 328 (965)
+.+|.|+++ ++||.+ ||+|++|-.+++++.+. +-+..++......|..+++++. +.+..++.+|+..||.
T Consensus 67 k~ilnFcaN---nYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh--~rED~ilypscfdANa 141 (417)
T KOG1359|consen 67 KKILNFCAN---NYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFH--GREDTILYPSCFDANA 141 (417)
T ss_pred cceeeeccc---ccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHh--CCCceEEeccccccch
Confidence 578998875 779975 99999999999988532 2233467788899999999998 5788999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.++.+... +.+ -+..|.--|.+.+....+.- .+.+.|+
T Consensus 142 g~feail~--------ped-AvfSDeLNhASIIdGirLck---------------------------------ry~h~dv 179 (417)
T KOG1359|consen 142 GAFEAILT--------PED-AVFSDELNHASIIDGIRLCK---------------------------------RYRHVDV 179 (417)
T ss_pred HHHHHhcC--------hhh-hhhccccccchhhhhhHHHh---------------------------------hhccchh
Confidence 99886632 333 33334455666443332221 1122467
Q ss_pred HHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEecccc-C-CCcccccccccccCC--C
Q psy8199 409 FDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-G-CGRTGKFFACEHAEI--W 483 (965)
Q Consensus 409 ~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~~~~~~--~ 483 (965)
.+++..+.+. ..+...|+.+. +.++.|.+.| |++|.+|+++||.||++||.+. | ||.+|. +.-+.+|+ .
T Consensus 180 ~~l~~~l~~a~k~r~klv~TDg-~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGr-Gt~E~~~vm~~ 253 (417)
T KOG1359|consen 180 FDLEHCLISACKMRLKLVVTDG-VFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGR-GTAEEFGVMGD 253 (417)
T ss_pred HHHHHHHHHhhhheEEEEEecc-eeccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCC-ChHHHhCCCCc
Confidence 7777666543 45788999999 9999999999 9999999999999999999975 3 344443 34566775 5
Q ss_pred ccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH-hcccHHHHHHHHHHH
Q psy8199 484 PDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF-NKDNILQRISQDMKK 560 (965)
Q Consensus 484 pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~-~~~~~~~~~~~~~~~ 560 (965)
+|++ |+||++||. .-|++.+++++++.+++ +.+++.++.+. +|.....+.++++.+ .+....++...+.++
T Consensus 254 vdiinsTLgKAlGga--~GGyttgp~~li~llrq--r~RpylFSnsl--ppavV~~a~ka~dllm~s~~~i~~~~a~~qr 327 (417)
T KOG1359|consen 254 VDIINSTLGKALGGA--SGGYTTGPKPLISLLRQ--RSRPYLFSNSL--PPAVVGMAAKAYDLLMVSSKEIQSRQANTQR 327 (417)
T ss_pred ceehhhhhhhhhcCC--CCCCccCChhHHHHHHh--cCCceeecCCC--ChhhhhhhHHHHHHHHhhHHHHHHHHHHHHH
Confidence 7776 899999872 45789999999999987 56777766655 444445555666654 455678889999999
Q ss_pred HHHHHHcccCCCceeeeecee-EEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee-------cC-CEEEEeCCcccCH
Q psy8199 561 ITKALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-------IG-NTVYLMPPYILNK 631 (965)
Q Consensus 561 l~~~L~~l~~~~~i~~v~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~-~~lR~~p~~~~t~ 631 (965)
+++.++.. ++. +.|.. .+..+.+. | ...+.++.+.|+++|+++.. .+ ..+|+..+..+++
T Consensus 328 fr~~me~a----Gft-Isg~~hPI~pv~lG--d----a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~ 396 (417)
T KOG1359|consen 328 FREFMEAA----GFT-ISGASHPICPVMLG--D----ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTE 396 (417)
T ss_pred HHHHHHhc----Cce-ecCCCCCccceecc--c----HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCH
Confidence 99988653 322 22211 23333332 3 45677889999999998852 22 5899999999999
Q ss_pred HHHHHHHHhhhccc
Q psy8199 632 NEIQHMTSAIFQTF 645 (965)
Q Consensus 632 ~~i~~~~~~l~~~~ 645 (965)
++|+++++++.++.
T Consensus 397 edid~~i~Af~~vg 410 (417)
T KOG1359|consen 397 EDIDRLIEAFSEVG 410 (417)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887643
No 163
>TIGR00510 lipA lipoate synthase. The family shows strong sequence conservation.
Probab=99.89 E-value=1.2e-21 Score=207.30 Aligned_cols=199 Identities=18% Similarity=0.259 Sum_probs=164.6
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCC-CCcccHHHHHHHHHHHHh
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRE-LKDRDLDNIENMICEVKK 761 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~-~~~~~~~~~~~~~~~i~~ 761 (965)
+.|.+ +++|+.+|.||+++...++. + .+++++.++++.+.+.|+++++|+++..+ +.+.+.+.+.++++.|++
T Consensus 65 tfm~i-~~gC~~~C~FC~v~~~rg~~----~-~~~eei~~~a~~~~~~GlkevvLTsv~~ddl~d~g~~~l~~li~~I~~ 138 (302)
T TIGR00510 65 TFMIL-GDICTRRCPFCDVAHGRNPL----P-PDPEEPAKLAETIKDMGLKYVVITSVDRDDLEDGGASHLAECIEAIRE 138 (302)
T ss_pred EEEec-CcCcCCCCCcCCccCCCCCC----C-CCHHHHHHHHHHHHHCCCCEEEEEeecCCCcccccHHHHHHHHHHHHh
Confidence 34445 99999999999987532221 2 47899999999999999999999998653 334557889999999987
Q ss_pred c--CcEeEEecC--CCCHHHHHHHHHhCCCeEeccCCCCHHHHhcccCCCCHHHHHHHHHHHHHc--CCceeeeEEEecC
Q psy8199 762 I--GLETCLTLG--MLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNV--GINICCGGIIGLS 835 (965)
Q Consensus 762 ~--~~~i~~~~~--~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~~i~Gl~ 835 (965)
. ++.+.+... .-+.+.++.|+++|++.+.+++||.+++++.+++.++++++++.++.+++. |+.+++++|+|+|
T Consensus 139 ~~p~i~Ievl~~d~~g~~e~l~~l~~aG~dv~~hnlEt~~~l~~~vrr~~t~e~~Le~l~~ak~~~pgi~~~TgiIVGlG 218 (302)
T TIGR00510 139 KLPNIKIETLVPDFRGNIAALDILLDAPPDVYNHNLETVERLTPFVRPGATYRWSLKLLERAKEYLPNLPTKSGIMVGLG 218 (302)
T ss_pred cCCCCEEEEeCCcccCCHHHHHHHHHcCchhhcccccchHHHHHHhCCCCCHHHHHHHHHHHHHhCCCCeecceEEEECC
Confidence 4 344433221 126889999999999999999999999999999999999999999999998 8999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCCCceeecccccc--CCCCCCCCCCCCHHHHHHHHHHH
Q psy8199 836 ESRDQRAELIFQLANLNPYPESVPINNLVQI--KGTPLYGSSILDPLEFIRTIAVA 889 (965)
Q Consensus 836 et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~--~gT~l~~~~~~~~~~~~~~ia~~ 889 (965)
||+||+.++++.|++++ ++.+++..|+.. +++|+..+..+...+.++.+|..
T Consensus 219 ETeee~~etl~~Lrelg--~d~v~igqYl~p~~~~~~v~~~~~p~~f~~~~~~a~~ 272 (302)
T TIGR00510 219 ETNEEIKQTLKDLRDHG--VTMVTLGQYLRPSRRHLPVKRYVSPEEFDYYRSVALE 272 (302)
T ss_pred CCHHHHHHHHHHHHhcC--CCEEEeecccCCCCCCCccccCCCHHHHHHHHHHHHH
Confidence 99999999999999999 999998888654 67888887766666666666553
No 164
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.88 E-value=1e-20 Score=212.41 Aligned_cols=325 Identities=19% Similarity=0.171 Sum_probs=218.7
Q ss_pred cccccccccchhccCCCC-CHHHHHHHHHHHhhcccc----ccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVE 328 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~~~----~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~ 328 (965)
+.||.|+++ .+|||. ||+|++|+++++++.... .......+...++.+.++++++ .+..++++||++++.
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~iv~~sg~~a~~ 75 (349)
T cd06454 1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHG--KEAALVFSSGYAAND 75 (349)
T ss_pred CCceecccC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhC--CCCEEEeccHHHHHH
Confidence 468888775 679998 999999999999874321 1122457788999999999986 345777889999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.+++.+.. ++++|++.++.| ..........+ .....++. .|.
T Consensus 76 ~~~~~~~~--------~gd~Vl~~~~~~-~~~~~~~~~~g------------~~~~~~~~-----------------~~~ 117 (349)
T cd06454 76 GVLSTLAG--------KGDLIISDSLNH-ASIIDGIRLSG------------AKKRIFKH-----------------NDM 117 (349)
T ss_pred HHHHHhcC--------CCCEEEEehhhh-HHHHHHHHHcC------------CceEEecC-----------------CCH
Confidence 88876542 456788776554 43222221111 11222221 245
Q ss_pred HHHHHHHHhC--CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-ccccc---CC
Q psy8199 409 FDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHA---EI 482 (965)
Q Consensus 409 ~~le~~l~~~--~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~---~~ 482 (965)
+++++++++. +.++++|++++ +++++|...+ +++|.++|++||+++|+||+|. +|..+... ..... ..
T Consensus 118 ~~le~~i~~~~~~~~~~~v~~~~-~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~ 191 (349)
T cd06454 118 EDLEKLLREARRPYGKKLIVTEG-VYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTD 191 (349)
T ss_pred HHHHHHHHHhhccCCCeEEEEec-cccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhccccc
Confidence 6777777653 24678888888 8999998876 8999999999999999999995 44332211 11111 12
Q ss_pred Cccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHH
Q psy8199 483 WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMK 559 (965)
Q Consensus 483 ~pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~~~~~~ 559 (965)
.+|++ +++|.++. +.|++++++++++.+... ... +..+.+.++..++++.++|+.+.+ +...+++.++.+
T Consensus 192 ~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 264 (349)
T cd06454 192 DVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSY--ARG--FIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVR 264 (349)
T ss_pred cCcEEEeechhhhcc---cCCEEECCHHHHHHHHHh--chh--hhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45665 58898865 347788888888777541 111 122335678889999999988765 456788888889
Q ss_pred HHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--------CCEEEEeCCcccCH
Q psy8199 560 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPPYILNK 631 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR~~p~~~~t~ 631 (965)
++.+.|.++ ++..+...+.++..... .+ .....++.+.|.++||.+.+. ++.+|++++...++
T Consensus 265 ~l~~~l~~~----g~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~ 335 (349)
T cd06454 265 YLRRGLKEL----GFPVGGSPSHIIPPLIG-DD----PAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTK 335 (349)
T ss_pred HHHHHHHhc----CCcccCCCCCcEEEEeC-CC----hHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCH
Confidence 998888765 22222222333222221 11 112456888899999998752 36899999988999
Q ss_pred HHHHHHHHhhhc
Q psy8199 632 NEIQHMTSAIFQ 643 (965)
Q Consensus 632 ~~i~~~~~~l~~ 643 (965)
++++++++++.+
T Consensus 336 ~~i~~~~~~l~~ 347 (349)
T cd06454 336 EDIDRLLEALKE 347 (349)
T ss_pred HHHHHHHHHHHH
Confidence 999999998864
No 165
>PLN02428 lipoic acid synthase
Probab=99.88 E-value=5.7e-21 Score=203.70 Aligned_cols=177 Identities=17% Similarity=0.288 Sum_probs=150.3
Q ss_pred EeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccC-CCCcccHHHHHHHHHHH
Q psy8199 681 LAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWR-ELKDRDLDNIENMICEV 759 (965)
Q Consensus 681 ~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~-~~~~~~~~~~~~~~~~i 759 (965)
..+.|.+ +++|+.+|.||+++...+ .++ .+++++.+.++.+.+.|++++.|+++.. .+.+...+++.++++.|
T Consensus 102 taT~mil-g~gCtr~CrFCav~~~~~----p~~-~d~~Ep~~vA~~v~~~Glk~vvltSg~rddl~D~ga~~~~elir~I 175 (349)
T PLN02428 102 TATIMIL-GDTCTRGCRFCAVKTSRT----PPP-PDPDEPENVAEAIASWGVDYVVLTSVDRDDLPDGGSGHFAETVRRL 175 (349)
T ss_pred eEEEEEe-cCCCCCCCCCCcCCCCCC----CCC-CChhhHHHHHHHHHHcCCCEEEEEEcCCCCCCcccHHHHHHHHHHH
Confidence 3455666 999999999999875322 233 5688999999888999999999999864 33567789999999999
Q ss_pred HhcC--cEeEE-ecCC-CCHHHHHHHHHhCCCeEeccCCCCHHHHhccc-CCCCHHHHHHHHHHHHHc--CCceeeeEEE
Q psy8199 760 KKIG--LETCL-TLGM-LNENQAYRLKKVGLDYYNHNLDTSPKLYGDII-STRDYENRLNTLKNVRNV--GINICCGGII 832 (965)
Q Consensus 760 ~~~~--~~i~~-~~~~-~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~-~~~~~~~~~~~i~~~~~~--Gi~v~~~~i~ 832 (965)
++.. +.+.. .++. .+++.++.|+++|++.+++++||++++++.|+ +.+++++++++++.+++. |+.+++++|+
T Consensus 176 r~~~P~i~Ie~L~pdf~~d~elL~~L~eAG~d~i~hnlETv~rL~~~Ir~~~~sye~~Le~L~~ak~~~pGi~tkSg~Mv 255 (349)
T PLN02428 176 KQLKPEILVEALVPDFRGDLGAVETVATSGLDVFAHNIETVERLQRIVRDPRAGYKQSLDVLKHAKESKPGLLTKTSIML 255 (349)
T ss_pred HHhCCCcEEEEeCccccCCHHHHHHHHHcCCCEEccCccCcHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeEEE
Confidence 9854 44433 2333 38999999999999999999999999999999 678999999999999999 9999999999
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCCCceeeccccc
Q psy8199 833 GLSESRDQRAELIFQLANLNPYPESVPINNLVQ 865 (965)
Q Consensus 833 Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P 865 (965)
|+|||+||+.++++.+++++ ++.+++..|++
T Consensus 256 GLGET~Edv~e~l~~Lrelg--vd~vtigqyL~ 286 (349)
T PLN02428 256 GLGETDEEVVQTMEDLRAAG--VDVVTFGQYLR 286 (349)
T ss_pred ecCCCHHHHHHHHHHHHHcC--CCEEeeccccC
Confidence 99999999999999999999 99999976653
No 166
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=5.6e-21 Score=213.91 Aligned_cols=317 Identities=12% Similarity=0.175 Sum_probs=218.7
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al 331 (965)
+++..+|+..| .+++| .+|.+++++.+.+..... |+.....+|.+.+++.++.+.++|++++|+++++..++
T Consensus 27 ~~~~~i~l~~n--en~~~-~~~~v~~a~~~~~~~~~~-----Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~ 98 (366)
T PRK01533 27 GDHSFVKLASN--ENPFG-CSPRVLDELQKSWLDHAL-----YPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIIS 98 (366)
T ss_pred CCCceEEeCCC--CCCCC-CCHHHHHHHHHHHHhcCc-----CCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHH
Confidence 45678888776 45677 578899999887655422 33444566777788877778889999999999999998
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
++... +++.|++.+++|.++...+...+ ..+..+|... .. .|+++|
T Consensus 99 ~~l~~--------~gd~vlv~~P~y~~~~~~~~~~g-------------~~v~~v~~~~--~~-----------~d~~~l 144 (366)
T PRK01533 99 RAVLK--------AGDNIVTAGATFPQYRHHAIIEG-------------CEVKEVALNN--GV-----------YDLDEI 144 (366)
T ss_pred HHhcC--------CCCEEEEcCCcHHHHHHHHHHcC-------------CEEEEeecCC--CC-----------cCHHHH
Confidence 87643 56789999999988743332221 1233333321 11 367888
Q ss_pred HHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccccCCCccee---
Q psy8199 412 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWPDFL--- 487 (965)
Q Consensus 412 e~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~~~pDiv--- 487 (965)
++++.+ .....++++| +|++|.+. +.+.+++|.++|++++ ++|+||+|..|...+.. .......-.+.++
T Consensus 145 ~~~~~~--~~~~v~i~~P--~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 218 (366)
T PRK01533 145 SSVVDN--DTKIVWICNP--NNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLR 218 (366)
T ss_pred HHHhCc--CCcEEEEeCC--CCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEe
Confidence 887753 2234455556 99999877 6677889999998876 57789999876432211 1111122234444
Q ss_pred eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHH----HHHHHHHH
Q psy8199 488 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI----SQDMKKIT 562 (965)
Q Consensus 488 t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~----~~~~~~l~ 562 (965)
+|||.++ .| +++|++++++++++.+.. ...+++.+.+++.++.++|+ +.++.+++ ++..+++.
T Consensus 219 SfSK~~~l~G-lRiG~~i~~~~~~~~l~~--------~~~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~ 286 (366)
T PRK01533 219 TFSKAYGLAS-FRVGYAVGHEELIEKLNV--------VRLPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYE 286 (366)
T ss_pred CchHHhcChH-HHHhHHhCCHHHHHHHHH--------hcCCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHH
Confidence 6899887 45 899999999999998865 12457789999999999984 33344333 33444444
Q ss_pred HHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 563 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
+.++.+ ++....+.|+|+.+.+. + ...+.+.|.++||.+++..+++|++ ..+.++.+.+++++.
T Consensus 287 ~~l~~~----g~~~~~~~~nf~~~~~~--~-------~~~~~~~l~~~GI~Vr~~~~~iRis---~~~~~~~~~l~~al~ 350 (366)
T PRK01533 287 SFCKEN----EIPFYQSQTNFIFLPVE--N-------GGEIYEACAHAGFIIRPFPNGVRIT---VGTREQNEGVISVLQ 350 (366)
T ss_pred HHHHhC----CCccCCCcCcEEEEeCC--C-------HHHHHHHHHHCCcEEccCCCceEEe---CCCHHHHHHHHHHHH
Confidence 444433 45556778998888763 2 2357788999999999988899999 778899999998886
Q ss_pred cc
Q psy8199 643 QT 644 (965)
Q Consensus 643 ~~ 644 (965)
+.
T Consensus 351 ~~ 352 (366)
T PRK01533 351 QH 352 (366)
T ss_pred HH
Confidence 53
No 167
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.8e-20 Score=205.41 Aligned_cols=318 Identities=14% Similarity=0.175 Sum_probs=234.4
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcC-CCCCeEEEcCChhHHHHHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ-YKLGHCFYGSDGASAVEVALKM 333 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~~v~~~~sGseA~~~Al~~ 333 (965)
..+|+.++ .+++| .+|.+.+++.+.++.+ ..|+.+...++.+.+++.++ ...+.|+.++|.+|.+...+++
T Consensus 23 ~~i~LssN--enP~g-p~~~~~~~~~~~~~~~-----~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~ 94 (356)
T COG0079 23 GIIKLSSN--ENPYG-PPPKVIEAIRAALDKL-----NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRA 94 (356)
T ss_pred cceeecCC--CCCCC-CCHHHHHHHHHHHHhh-----ccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHH
Confidence 68888887 67888 4589999998888754 35666677889999999887 6678999999999999999998
Q ss_pred HHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy8199 334 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 413 (965)
Q Consensus 334 a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 413 (965)
.+. ++++|++..++|.-+...+...+. .++.+|..+ +. .|++++.+
T Consensus 95 ~~~--------~gd~vl~~~Ptf~~Y~~~a~~~g~-------------~~~~v~~~~--~~-----------~d~~~~~~ 140 (356)
T COG0079 95 FVE--------PGDTVLIPEPTFSMYEIAAQLAGA-------------EVVKVPLKE--FR-----------LDLDAILA 140 (356)
T ss_pred hhc--------CCCEEEEcCCChHHHHHHHHhcCC-------------eEEEecccc--cc-----------cCHHHHHH
Confidence 864 458999999999888666555543 344455432 11 36777777
Q ss_pred HHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---eec
Q psy8199 414 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLS 490 (965)
Q Consensus 414 ~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~s 490 (965)
.+.+ +.-..++++| +|++|... +.+.++++.+.|.+ +.+||+||+|..|+. ........-.++++ |||
T Consensus 141 ~~~~--~~~lv~i~nP--NNPTG~~~-~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~---~~~~~l~~~~~nlivlRTfS 211 (356)
T COG0079 141 AIRD--KTKLVFLCNP--NNPTGTLL-PREELRALLEALPE-GGLVVIDEAYIEFSP---ESSLELLKYPPNLIVLRTFS 211 (356)
T ss_pred hhhc--CCCEEEEeCC--CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhcCC---chhhhhccCCCCEEEEEecH
Confidence 7763 2346677778 99999887 55557778887777 999999999998854 12222223234465 799
Q ss_pred cccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHccc
Q psy8199 491 KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSLI 569 (965)
Q Consensus 491 K~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~l~ 569 (965)
|++|-.++++|++++++++++.+.. ....|+.|.+++++|.++|+.-+ -....+++.+.++++.+.|+.+
T Consensus 212 Ka~gLAGlRlGy~ia~~~~i~~l~~--------vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~- 282 (356)
T COG0079 212 KAFGLAGLRVGYAIANPELIAALNK--------VRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKAL- 282 (356)
T ss_pred HhhhcchhceeeccCCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 9665433899999999999999986 34778889999999999886331 1234555666666666666654
Q ss_pred CCCcee-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC------CEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 570 THPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG------NTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 570 ~~~~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
+ +. ..++.++|+.+.+. + .. +..+.+.|.++||+++... +++|++ +-++++.+.+++++.
T Consensus 283 --~-~~~v~pS~aNFvlv~~~--~----~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een~~ll~AL~ 349 (356)
T COG0079 283 --G-LFGVFPSQANFVLVRVP--D----AE-AAALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEENDRLLAALR 349 (356)
T ss_pred --C-CCeecCCCCcEEEEECC--C----cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHHHHHHHHHH
Confidence 3 33 55677999988775 2 23 4468899999999999763 489999 788888899998887
Q ss_pred ccc
Q psy8199 643 QTF 645 (965)
Q Consensus 643 ~~~ 645 (965)
+..
T Consensus 350 ~~~ 352 (356)
T COG0079 350 EVL 352 (356)
T ss_pred HHH
Confidence 644
No 168
>KOG1360|consensus
Probab=99.87 E-value=6.3e-21 Score=195.80 Aligned_cols=317 Identities=16% Similarity=0.169 Sum_probs=233.5
Q ss_pred CCC-CCHHHHHHHHHHHhhcccc----ccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcC
Q psy8199 268 FGH-SNSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKG 342 (965)
Q Consensus 268 lGh-~~p~v~~av~~~~~~~~~~----~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g 342 (965)
||. .||+|.+|+.+.+++.+.. -+..+.+....+|.+.|+++. ..+..++.+|..-||+..+-..-+.
T Consensus 182 Lgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH--qK~aALlFsSCfVANDstLftLak~----- 254 (570)
T KOG1360|consen 182 LGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH--QKEAALLFSSCFVANDSTLFTLAKK----- 254 (570)
T ss_pred ccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh--cCcceeeeeeeeeccchHHHHHHHH-----
Confidence 444 4999999999999885322 123467888999999999998 5677777788999999988744331
Q ss_pred CCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC-c
Q psy8199 343 FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHN-K 421 (965)
Q Consensus 343 ~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~-~ 421 (965)
=.+-+|..|.+-|.+.+..+..++.+. . .|.+||++.|+++|++.+. .
T Consensus 255 --lpgcei~SD~gNHASMI~GIrns~v~K-------------------~----------IFrHND~~hL~~lL~~~~~sv 303 (570)
T KOG1360|consen 255 --LPGCEIFSDEGNHASMIQGIRNSRVPK-------------------H----------IFRHNDLDHLEQLLQSSPKSV 303 (570)
T ss_pred --CCCcEEeccccchHHHHHHhhhcCCcc-------------------e----------eeccCCHHHHHHHHHhCCCCC
Confidence 245678888889998776665554221 1 1334899999999987643 3
Q ss_pred EEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccc--ccccCC--Cccee--eeccccCC
Q psy8199 422 IAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA--CEHAEI--WPDFL--CLSKGITG 495 (965)
Q Consensus 422 ~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~--~~~~~~--~pDiv--t~sK~l~g 495 (965)
...|-+|. |+++.|.+.| |++|.+++++||++..+|||+. .|-.|..++ -+.-|+ +.||+ |+||++|.
T Consensus 304 PKivAFEt-VhSM~Gavcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc 377 (570)
T KOG1360|consen 304 PKIVAFET-VHSMDGAVCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC 377 (570)
T ss_pred CceEEEee-eeccCCCcCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhccc
Confidence 46788999 9999999999 9999999999999999999997 677776433 455666 57888 79999976
Q ss_pred CcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHcccCCC
Q psy8199 496 GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD---NILQRISQDMKKITKALTSLITHP 572 (965)
Q Consensus 496 G~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~ 572 (965)
= -||+.++..+++.++. ....|+ .|.+-+|..++.|+++.+++..+ .+...-+++..++++.|.++
T Consensus 378 V---GGYIAat~~LvDmiRS--yAaGFI--FTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~---- 446 (570)
T KOG1360|consen 378 V---GGYIAATRKLVDMIRS--YAAGFI--FTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL---- 446 (570)
T ss_pred c---cceehhhhhHHHHHHH--hcCceE--EecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc----
Confidence 1 1568899999998876 333454 45567899999999999998754 24444556777788888776
Q ss_pred ceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEee--------cCCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 573 KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRP--------IGNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 573 ~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~--------~~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
++..++....++-+.+. | ...+.+.++.|+ ++||++.. +...+|+.|...+|++.++.+++++..
T Consensus 447 GiPVi~~pSHIiPv~vg--d----a~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~ 520 (570)
T KOG1360|consen 447 GIPVIPNPSHIIPVRVG--D----AALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLD 520 (570)
T ss_pred CCcccCCCcceeeeecc--C----HHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHH
Confidence 55555555666666553 4 233445666665 67999863 226899999999999988888877654
Q ss_pred cc
Q psy8199 644 TF 645 (965)
Q Consensus 644 ~~ 645 (965)
++
T Consensus 521 vw 522 (570)
T KOG1360|consen 521 VW 522 (570)
T ss_pred HH
Confidence 43
No 169
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.87 E-value=2e-20 Score=212.01 Aligned_cols=333 Identities=14% Similarity=0.126 Sum_probs=217.5
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 332 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~ 332 (965)
+..+||+..+ .+.++ .+|++.+++.+++...... .........++.+.+++.++.+.+++++++|+++|+..+++
T Consensus 27 ~~~~i~l~~~--~~~~~-~~~~~~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~ 101 (380)
T PRK06225 27 DKEMIWMGQN--TNHLG-PHEEVREAMIRCIEEGEYC--KYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMR 101 (380)
T ss_pred cCCeEEccCC--CCCCC-CCHHHHHHHHHHHhcCCCC--CCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHH
Confidence 4567887765 34454 6899999999888653111 11222345678888888887777899999999999999998
Q ss_pred HHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHH
Q psy8199 333 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 412 (965)
Q Consensus 333 ~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 412 (965)
.+.. +++.|++.+++|+.+.......+ ..+..+|....... + ..|+++++
T Consensus 102 ~~~~--------~gd~vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~--------~-~~d~~~l~ 151 (380)
T PRK06225 102 AFLS--------PGDNAVTPDPGYLIIDNFASRFG-------------AEVIEVPIYSEECN--------Y-KLTPELVK 151 (380)
T ss_pred HhcC--------CCCEEEEcCCCCcchHHHHHHhC-------------ceEEeeccccccCC--------c-cCCHHHHH
Confidence 7632 45779999999876522111111 12333332110000 0 13677888
Q ss_pred HHHHhCCCcEEEE-EEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccccc-CCCcceeeec
Q psy8199 413 ILLKKNHNKIAAI-IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA-EIWPDFLCLS 490 (965)
Q Consensus 413 ~~l~~~~~~~aai-i~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~-~~~pDivt~s 490 (965)
+.+. +++.+| +++| +|++|.+. +.+.+++|.++|++||+++|+||+|.+|.. +........ ....++.+||
T Consensus 152 ~~~~---~~~~~v~l~~p--~NptG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~~s~S 224 (380)
T PRK06225 152 ENMD---ENTRLIYLIDP--LNPLGSSY-TEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTSYSFS 224 (380)
T ss_pred hhcC---CCceEEEEeCC--CCCCCcCC-CHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEEeech
Confidence 7775 234444 4556 78888766 677899999999999999999999987632 221111111 1123355899
Q ss_pred cccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHH----HHHHHHHHH
Q psy8199 491 KGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQ----DMKKITKAL 565 (965)
Q Consensus 491 K~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~----~~~~l~~~L 565 (965)
|.++ .| +++|++++++++++.+.. ....+++.|.++++++.++|+.. +.+.+++++ +.+.+.+.|
T Consensus 225 K~~g~~G-~RiG~i~~~~~l~~~~~~-------~~~~~~~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L 294 (380)
T PRK06225 225 KIFGMAG-LRIGAVVATPDLIEVVKS-------IVINDLGTNVIAQEAAIAGLKVK--DEWIDRIRRTTFKNQKLIKEAV 294 (380)
T ss_pred hhcCCcc-ceeEEEecCHHHHHHHHH-------HHhcccCCCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHH
Confidence 9986 45 899999999999988765 12346777899999888888642 234444443 344455555
Q ss_pred HcccCCCce--eeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--------CCEEEEeCCcccCHHHHH
Q psy8199 566 TSLITHPKI--INFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPPYILNKNEIQ 635 (965)
Q Consensus 566 ~~l~~~~~i--~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR~~p~~~~t~~~i~ 635 (965)
+++ +++ ...++.|.++++.+. ..+. ....+.+.|.++||.++|+ .+++|++ +..++++++
T Consensus 295 ~~~---~~~~~~~~~~~g~~~~~~~~-~~~~----~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s--~~~~~e~l~ 364 (380)
T PRK06225 295 DEI---EGVFLPVYPSHGNMMVIDIS-EAGI----DPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVS--FSIPREQVE 364 (380)
T ss_pred HhC---cCCccccCCCCCeEEEEEcc-cccC----CHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEE--eCCCHHHHH
Confidence 443 332 234566888887764 1111 1346778888999999874 1489999 566889999
Q ss_pred HHHHhhhccccc
Q psy8199 636 HMTSAIFQTFNE 647 (965)
Q Consensus 636 ~~~~~l~~~~~~ 647 (965)
++++++...+..
T Consensus 365 ~~~~~l~~~~~~ 376 (380)
T PRK06225 365 VFCEEFPDVVET 376 (380)
T ss_pred HHHHHHHHHHHH
Confidence 999998765543
No 170
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.87 E-value=3.1e-20 Score=212.29 Aligned_cols=334 Identities=12% Similarity=0.077 Sum_probs=214.8
Q ss_pred ccchhccCCCCCHHHHHHHHHHHhhc-ccccc-----CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHH
Q psy8199 261 SSWWVNLFGHSNSYINKALKNQLNKL-EHVML-----SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 334 (965)
Q Consensus 261 ~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~-----~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a 334 (965)
++.+....||++|++++++..++ .. .+++. ..+..+...+++++++++++.+.+.+.+++||+++.+.+++.+
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~ 101 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAA 101 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHH
Confidence 45556678999999998877776 32 22222 2344567789999999998765568888888888888887776
Q ss_pred HHHHHhcCCC-CceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy8199 335 FHYWYNKGFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 413 (965)
Q Consensus 335 ~~~~~~~g~~-~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 413 (965)
+.. + +++.|++ ...||+.+..++...+... ...+..+|.+... ..|++++++
T Consensus 102 ~~~------~~~gd~Vl~-~~~~h~~~~~~~~~~~~~~--------g~~~~~v~~~~~~------------~~d~~~l~~ 154 (398)
T cd00613 102 IRA------YHKRNKVLV-PDSAHPTNPAVARTRGEPL--------GIEVVEVPSDEGG------------TVDLEALKE 154 (398)
T ss_pred Hhc------ccCCCEEEE-cCccCcchHHHHHHhcccC--------CcEEEEeccCCCC------------CcCHHHHHH
Confidence 542 1 2455555 5568888766665554211 1123444443211 136788888
Q ss_pred HHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceee--ecc
Q psy8199 414 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSK 491 (965)
Q Consensus 414 ~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK 491 (965)
++. +++++|++++ ++ ++|.+. +++++|+++|++||+++|+|++++.....+. ... ..+|+++ ++|
T Consensus 155 ~i~---~~t~~viv~~-~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~~~~~---~~~--~~~d~~~~s~~K 221 (398)
T cd00613 155 EVS---EEVAALMVQY-PN-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLKP---PGE--YGADIVVGNLQK 221 (398)
T ss_pred hcC---CCeEEEEEEC-CC-CCceec---chHHHHHHHHHhcCCEEEEEeccccccCCCC---hHH--cCCCEEEeeccc
Confidence 774 4688899988 64 678763 5689999999999999999998753211111 111 2478876 467
Q ss_pred cc---CCCcccceeeeecHHHHHhhhcc---CC-----ccc---------------ccccCCCCCCHHHHHHHHHHHHHH
Q psy8199 492 GI---TGGYLPLSLVMTTDKIYNSIYYK---NN-----INI---------------FLHSHSYSGNPLACCAALATLEIF 545 (965)
Q Consensus 492 ~l---~gG~~pig~v~~~~~i~~~~~~~---~~-----~~~---------------~~~~~t~~~~~~~~aaa~a~L~~~ 545 (965)
.+ ++|++.+|++++++++++.+... .. ... ....++++++++.++++.++++.+
T Consensus 222 ~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~ 301 (398)
T cd00613 222 TGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL 301 (398)
T ss_pred cCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh
Confidence 54 34447788888888887764210 00 000 012346777888888888888776
Q ss_pred hccc---HHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee----cC
Q psy8199 546 NKDN---ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----IG 618 (965)
Q Consensus 546 ~~~~---~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~~ 618 (965)
.+++ +.++.++++++++++|+++........ .....+.+.+. .. .......+.+.|.++|+++.. ..
T Consensus 302 ~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~v~~~~~--~~--~~~~~~~~~~~L~~~gi~~~~~~~~~~ 375 (398)
T cd00613 302 GPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNG--PFFHEFVLRLP--PL--YGIRAEDLAKALIDGGFHAPTMYLPVD 375 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC--CeeEEEEEEcC--Cc--chHHHHHHHHhhhhcCccccccccCCC
Confidence 5433 567888899999999987621110001 11122233332 10 011245688889999998765 34
Q ss_pred CEEEEeCCcccCHHHHHHHHHhh
Q psy8199 619 NTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 619 ~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
+.+|++|++.+++++++++++.+
T Consensus 376 ~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 376 GTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CeEEEEcCCCCCHHHHHHHHHhC
Confidence 79999999999999999998764
No 171
>PRK07682 hypothetical protein; Validated
Probab=99.87 E-value=3.5e-20 Score=209.95 Aligned_cols=333 Identities=12% Similarity=0.092 Sum_probs=217.9
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhh-ccccccCCCCcHHHHHHHHHHHhhcCC--CCC-eEEEcCChhHHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNK-LEHVMLSNLTHKPVIKLSEKLSSLTQY--KLG-HCFYGSDGASAVEVA 330 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~~--~~~-~v~~~~sGseA~~~A 330 (965)
..+++..|.. .++ .++.+.+++.++++. ...|....+..+.+..+++.+.+.++. ..+ +|++++||++|+..+
T Consensus 21 ~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGEP--DFV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 4577766543 344 356788888887764 223433445667778888888776443 344 799999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCC-CCCCCCCCChhHHHHHHHH
Q psy8199 331 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIF 409 (965)
Q Consensus 331 l~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~ 409 (965)
++...+ +++.|++.+++|+++.......+. ....++... .... .|++
T Consensus 98 ~~~l~~--------~gd~vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~-----------~d~~ 145 (378)
T PRK07682 98 MRAIIN--------PGDEVLIVEPSFVSYAPLVTLAGG-------------VPVPVATTLENEFK-----------VQPA 145 (378)
T ss_pred HHHhCC--------CCCEEEEeCCCchhhHHHHHHcCC-------------EEEEeecCCccCCC-----------CCHH
Confidence 886642 568899999999876433222221 122222211 0011 2678
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccc-cccCCCccee-
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-EHAEIWPDFL- 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~-~~~~~~pDiv- 487 (965)
+|++++.+ ++.++++.. ++|++|.+. +.+.+++|.++|++|++++|+||+|..|...+.+.+. ...+..+.++
T Consensus 146 ~l~~~~~~---~~~~v~~~~-p~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~ 220 (378)
T PRK07682 146 QIEAAITA---KTKAILLCS-PNNPTGAVL-NKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTIL 220 (378)
T ss_pred HHHhhcCc---ccEEEEEEC-CCCCcCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEE
Confidence 88887742 345554444 489999755 7888999999999999999999999988654432221 2223223333
Q ss_pred --eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHH
Q psy8199 488 --CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKIT 562 (965)
Q Consensus 488 --t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~~~~~~~~~~~~~~l~ 562 (965)
+|||.++ .| +++|++++++++++.+.. ....++++.++++++++.++|+... -....+.++++.+.+.
T Consensus 221 ~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 293 (378)
T PRK07682 221 ISGFSKGFAMTG-WRLGFIAAPVYFSEAMLK------IHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFV 293 (378)
T ss_pred EecCcccccChh-hhhhhhhcCHHHHHHHHH------HHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 6899887 45 899999999999988865 1222345678899999888885321 1224455666667777
Q ss_pred HHHHcccCCCceeeeeceeEEEEEE-EeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCcccCHHH
Q psy8199 563 KALTSLITHPKIINFRQKGMIWAFD-VIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNKNE 633 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~g~G~~~~i~-~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~t~~~ 633 (965)
+.|+++ ++....+.|.++.+. +. ..+. ....+.+.++ ++||.+.|+ .+++|++ +..++++
T Consensus 294 ~~L~~~----~~~~~~p~g~~~~~~~~~-~~~~----~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis--~~~~~~~ 362 (378)
T PRK07682 294 TSFNEI----GLTCHVPGGAFYAFPSIS-STGL----SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCS--YATSLEQ 362 (378)
T ss_pred HHHHHC----CCccCCCCeeEEEEEecc-CCCC----CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEE--eCCCHHH
Confidence 777654 344455666655543 32 1111 1345666765 789999873 2689999 5567899
Q ss_pred HHHHHHhhhccc
Q psy8199 634 IQHMTSAIFQTF 645 (965)
Q Consensus 634 i~~~~~~l~~~~ 645 (965)
+++.++++.+.+
T Consensus 363 l~~~l~~l~~~l 374 (378)
T PRK07682 363 LQEAMKRMKRFV 374 (378)
T ss_pred HHHHHHHHHHHH
Confidence 999998887644
No 172
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.1e-20 Score=210.28 Aligned_cols=315 Identities=12% Similarity=0.140 Sum_probs=207.4
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 333 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~ 333 (965)
..++|+.++. .++| .+|.+.+|+.++++...+ ++.....++.+.+++.++.+.+++++++|+++++..+++.
T Consensus 29 ~~~i~l~~n~--~~~~-~~~~v~~a~~~~~~~~~~-----~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 29 EKIVKLASNE--NPYG-PSPKVKEAIAAHLDELAL-----YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRA 100 (359)
T ss_pred CceEEecCCC--CCCC-CCHHHHHHHHHHHHHhhc-----CCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHH
Confidence 3678987774 3477 488999999988776432 2333455677777777766678999999999999888776
Q ss_pred HHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy8199 334 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 413 (965)
Q Consensus 334 a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 413 (965)
... +++.|++.+++|+++...+...+ ..+..+|... .. .|++++++
T Consensus 101 ~~~--------~gd~v~~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~--~~-----------~d~~~l~~ 146 (359)
T PRK03158 101 LLN--------PGTNTVMAEPTFSQYRHNAIIEG-------------AEVREVPLKD--GG-----------HDLEAMLK 146 (359)
T ss_pred HhC--------CCCEEEEcCCCHHHHHHHHHHcC-------------CeEEEEecCC--CC-----------cCHHHHHH
Confidence 532 56889999999988643322211 1233444321 11 25777777
Q ss_pred HHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-cccccccCCCccee---ee
Q psy8199 414 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHAEIWPDFL---CL 489 (965)
Q Consensus 414 ~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pDiv---t~ 489 (965)
.+. +++.++++.. ++|++|.+.+ .+.+.++.+.|+ +|+++|+||+|..|-..+. .......+-.+.++ +|
T Consensus 147 ~~~---~~~~~v~i~~-p~NPtG~~~~-~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 220 (359)
T PRK03158 147 AID---EQTKIVWICN-PNNPTGTYVN-HEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTF 220 (359)
T ss_pred hcC---CCCCEEEEeC-CCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEec
Confidence 664 2344455444 4999998875 444555555553 6999999999987632221 11111112122332 78
Q ss_pred ccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHH----HHHHHHHHHH
Q psy8199 490 SKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI----SQDMKKITKA 564 (965)
Q Consensus 490 sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~----~~~~~~l~~~ 564 (965)
||.++ .| +|+|++++++++++.+.. ...+++.++++++++.++|+ +.++.+++ +++.+++.+.
T Consensus 221 SK~~g~~G-lRiG~~v~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~ 288 (359)
T PRK03158 221 SKAYGLAA-LRVGYGIASEELIEKLNI--------ARPPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAF 288 (359)
T ss_pred hHhhcCcc-hhhehhcCCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 45 899999999999988865 12356789999999999985 23333333 3344444444
Q ss_pred HHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----CCEEEEeCCcccCHHHHHHHHH
Q psy8199 565 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTS 639 (965)
Q Consensus 565 L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~~~ 639 (965)
|++ + ++..+++.|.++++.+. .+ ...+.+.|.++||.+.|+ .+++||+ ..+.++.+.+++
T Consensus 289 l~~---~-~~~~~~~~g~~i~~~~~-~~-------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~~~~l~~ 353 (359)
T PRK03158 289 CKE---Y-GLFYYPSQTNFIFVDTG-RD-------ANELFEALLKKGYIVRSGAALGFPTGVRIT---IGLKEQNDKIIE 353 (359)
T ss_pred HHH---C-CCeeCCCcCcEEEEECC-CC-------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cCCHHHHHHHHH
Confidence 443 2 34455667887776653 11 346778888999999984 3689999 458889999998
Q ss_pred hhhc
Q psy8199 640 AIFQ 643 (965)
Q Consensus 640 ~l~~ 643 (965)
++++
T Consensus 354 al~~ 357 (359)
T PRK03158 354 LLKE 357 (359)
T ss_pred HHHH
Confidence 8865
No 173
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.3e-20 Score=210.00 Aligned_cols=323 Identities=11% Similarity=0.131 Sum_probs=211.8
Q ss_pred CCc-ccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHH
Q psy8199 252 SGK-RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 330 (965)
Q Consensus 252 dG~-~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~A 330 (965)
.|+ .++++..|. .++| .+|++.+++.+.+.....| +.....+|.+.+++.++.+.++|++++|+++++..+
T Consensus 29 ~g~~~~~~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y-----~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~ 100 (369)
T PRK08153 29 RGRPFRARIGANE--SGFG-PSPSVIAAMREAAAEIWKY-----GDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLI 100 (369)
T ss_pred cCCcceeEecCCC--CCCC-CCHHHHHHHHHHHHHhhcC-----CCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHH
Confidence 454 456887663 3455 5888999998876543222 222256788888888876678999999999999998
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHH
Q psy8199 331 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 410 (965)
Q Consensus 331 l~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 410 (965)
++.... +++.|++.+++|.++.......+. .+..+|.... . .|+++
T Consensus 101 ~~~~~~--------~gd~vlv~~p~y~~~~~~~~~~g~-------------~~~~vp~~~~--~-----------~~~~~ 146 (369)
T PRK08153 101 VRLYVE--------PGDPVVTSLGAYPTFNYHVAGFGG-------------RLVTVPYRDD--R-----------EDLDA 146 (369)
T ss_pred HHHhcC--------CCCEEEECCCcchHHHHHHHHcCC-------------eEEEeeCCCC--C-----------CCHHH
Confidence 886543 568899999999887432222111 2233332111 0 25666
Q ss_pred HHHHHHhCCCcEEEE-EEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee--
Q psy8199 411 LEILLKKNHNKIAAI-IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL-- 487 (965)
Q Consensus 411 le~~l~~~~~~~aai-i~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv-- 487 (965)
+++.+.. .++.+| +++| +|++|.+. +.+.+.++.+.|++ ++++|+||+|..|+..|....+. ...|+++
T Consensus 147 l~~~~~~--~~~~~i~l~~P--~NPtG~~~-~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~ 218 (369)
T PRK08153 147 LLDAARR--ENAPLVYLANP--DNPMGSWH-PAADIVAFIEALPE-TTLLVLDEAYCETAPAGAAPPID--TDDPNVIRM 218 (369)
T ss_pred HHHHhcc--cCCcEEEEeCC--CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhhcCcccchhhh--hcCCCEEEE
Confidence 6655532 233444 4566 89999877 56667788887774 99999999999886544322111 1235554
Q ss_pred -eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 488 -CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 488 -t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
+|||.++ .| +++|++++++++++.+.. ...+++.++++++++.++|+ ++.+.+++++..+..++.+
T Consensus 219 ~SfSK~~g~~G-lRiG~~v~~~~~~~~l~~--------~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~ 286 (369)
T PRK08153 219 RTFSKAYGLAG-ARVGYAIGAPGTIKAFDK--------VRNHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRI 286 (369)
T ss_pred ecchHhccCcc-hheeeeecCHHHHHHHHH--------hhcCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 7899987 45 899999999999988865 12356789999999999985 3344444444444444444
Q ss_pred Hcc-cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEe-ec----CCEEEEeCCcccCHHHHHHHHH
Q psy8199 566 TSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR-PI----GNTVYLMPPYILNKNEIQHMTS 639 (965)
Q Consensus 566 ~~l-~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~-~~----~~~lR~~p~~~~t~~~i~~~~~ 639 (965)
.+. ... ++...++.|.++.+.+. .+ ...+..+.+.|.++||.++ |+ .+++|++ ..++++++.+++
T Consensus 287 ~~~L~~~-g~~~~p~~~~f~~~~~~-~~----~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis---~~~~~~~~~~~~ 357 (369)
T PRK08153 287 AAIARAN-GLTPLPSATNFVAIDCG-RD----GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVS---CGPDEELDLFAE 357 (369)
T ss_pred HHHHHHC-CCccCCCcCcEEEEECC-CC----cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cCCHHHHHHHHH
Confidence 332 222 33334556667666553 11 2345678888999999996 42 2689999 347899999999
Q ss_pred hhhccc
Q psy8199 640 AIFQTF 645 (965)
Q Consensus 640 ~l~~~~ 645 (965)
++.+..
T Consensus 358 al~~~~ 363 (369)
T PRK08153 358 ALPEAL 363 (369)
T ss_pred HHHHHH
Confidence 887654
No 174
>PLN00175 aminotransferase family protein; Provisional
Probab=99.86 E-value=1.6e-19 Score=205.76 Aligned_cols=335 Identities=11% Similarity=0.100 Sum_probs=221.8
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcCC--CCC-eEEEcCChhHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQY--KLG-HCFYGSDGASAVE 328 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~--~~~-~v~~~~sGseA~~ 328 (965)
+...+|+..|... +. .++.+.+++.+.++.. ..|....+..+.+..+++.+.+..+. +.+ ++++|+|+++|+.
T Consensus 53 ~~~~i~l~~G~P~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~ 129 (413)
T PLN00175 53 KHGAINLGQGFPN--FD-GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIA 129 (413)
T ss_pred cCCeEecCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHH
Confidence 3467888887553 22 4788899998887652 34444445667778888888776543 344 6999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.++.... .+++.|++.+++|.++.......+. .+..++....... .|+
T Consensus 130 ~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----------~~~ 177 (413)
T PLN00175 130 ATILGLI--------NPGDEVILFAPFYDSYEATLSMAGA-------------KIKTVTLRPPDFA-----------VPE 177 (413)
T ss_pred HHHHHhC--------CCCCEEEEeCCCchhHHHHHHHcCC-------------EEEEEECCcccCC-----------CCH
Confidence 9888653 2568899999999777433222221 2334443211111 257
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccc-cccCCCccee
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-EHAEIWPDFL 487 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~-~~~~~~pDiv 487 (965)
++|++.+.. ++.+|++.. ++|++|.+. +.+.+++|.++|++||+++|+||+|..|...+..... +..+..+.++
T Consensus 178 ~~l~~~~~~---~~k~i~i~~-p~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi 252 (413)
T PLN00175 178 DELKAAFTS---KTRAILINT-PHNPTGKMF-TREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTV 252 (413)
T ss_pred HHHHHhcCc---CceEEEecC-CCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEE
Confidence 888887752 455666665 689999766 7888999999999999999999999877443332221 2223233333
Q ss_pred ---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHH
Q psy8199 488 ---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKI 561 (965)
Q Consensus 488 ---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l 561 (965)
+|||.++ .| +++|++++++++++.+.. .....+++.+++++.++.++|+..+. ++..+.++++.+.+
T Consensus 253 ~i~SfSK~~~~~G-~RiG~~v~~~~l~~~l~~------~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 325 (413)
T PLN00175 253 TMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQ------AHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDIL 325 (413)
T ss_pred EEecchhhccCcc-hheeeeEeCHHHHHHHHH------HHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 6899887 45 899999999999888765 22234677889999999888853211 23455566666677
Q ss_pred HHHHHcccCCCceeeeeceeEEE-EEEEeecCccchhhHHHHHHHHHH-HcCcEEeec----------CCEEEEeCCccc
Q psy8199 562 TKALTSLITHPKIINFRQKGMIW-AFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI----------GNTVYLMPPYIL 629 (965)
Q Consensus 562 ~~~L~~l~~~~~i~~v~g~G~~~-~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----------~~~lR~~p~~~~ 629 (965)
.+.|++. ++....+.|.|+ ++.+. ..+ ......+.+.|+ ++||.+.|+ .+++||+ +..
T Consensus 326 ~~~L~~~----g~~~~~p~g~~f~~~~~~-~~~---~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls--~~~ 395 (413)
T PLN00175 326 VEGLKEV----GFKVYPSSGTYFVMVDHT-PFG---FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFA--FCK 395 (413)
T ss_pred HHHHHHC----CCeecCCCeeEEEEEecc-ccC---CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEE--EcC
Confidence 7777653 344455666654 44332 111 011345667775 679998863 1589999 556
Q ss_pred CHHHHHHHHHhhhcc
Q psy8199 630 NKNEIQHMTSAIFQT 644 (965)
Q Consensus 630 t~~~i~~~~~~l~~~ 644 (965)
+++++++.++++.+.
T Consensus 396 ~~e~l~~~~~rL~~~ 410 (413)
T PLN00175 396 DEETLRAAVERMKTK 410 (413)
T ss_pred CHHHHHHHHHHHHHH
Confidence 899999999888654
No 175
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.6e-19 Score=205.24 Aligned_cols=334 Identities=12% Similarity=0.067 Sum_probs=219.8
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Al 331 (965)
..+++..|... ++ .++.+.+++.+.+... ..|....+..+.+..+++.+.+..+ ...+++++++||++|+..++
T Consensus 25 ~~i~l~~g~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGESD--LP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 46787776542 33 3788999998887653 2344445567788888888887765 46689999999999999998
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFD 410 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~ 410 (965)
+.... +++.|++.+++|..+.......+ ..+..+|.... .... .|+++
T Consensus 102 ~~l~~--------~gd~vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~----------~d~~~ 150 (382)
T PRK06108 102 QALVG--------PGDEVVAVTPLWPNLVAAPKILG-------------ARVVCVPLDFGGGGWT----------LDLDR 150 (382)
T ss_pred HHhcC--------CCCEEEEeCCCccchHHHHHHCC-------------CEEEEeeCCCCCCCcc----------CCHHH
Confidence 87643 56789999999976632222111 12333333210 0000 26788
Q ss_pred HHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcc-ccc-cc-ccccCCCccee
Q psy8199 411 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT-GKF-FA-CEHAEIWPDFL 487 (965)
Q Consensus 411 le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~-G~~-~~-~~~~~~~pDiv 487 (965)
|++.+. .++.+|++.. ++|++|.+. +.+.+++|.++|+++|+++|+||+|.+|... +.. .. .......+.++
T Consensus 151 l~~~~~---~~~~~i~l~~-p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 225 (382)
T PRK06108 151 LLAAIT---PRTRALFINS-PNNPTGWTA-SRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRII 225 (382)
T ss_pred HHHhcC---ccceEEEEEC-CCCCCCccc-CHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEE
Confidence 887774 2345555555 589999775 7888999999999999999999999987432 111 11 11111122333
Q ss_pred ---eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHH
Q psy8199 488 ---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKIT 562 (965)
Q Consensus 488 ---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~ 562 (965)
+|||.++.+++++|++++++++++.+.. .....+++.++++++++.++|+...+ ++..++++++.+++.
T Consensus 226 ~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~ 299 (382)
T PRK06108 226 FVNSFSKNWAMTGWRLGWLVAPPALGQVLEK------LIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLV 299 (382)
T ss_pred EEeechhhccCcccceeeeeCCHHHHHHHHH------HHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 6899886322899999999999888764 12234566788999999888863211 234555666666666
Q ss_pred HHHHcccCCCceeeeeceeEEE-EEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCcccCHHH
Q psy8199 563 KALTSLITHPKIINFRQKGMIW-AFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNKNE 633 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~g~G~~~-~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~t~~~ 633 (965)
+.|+++ +++....+.|.++ .+.+. +.. ....+.+.|+ ++||.+.|+ .+++|++... ++++
T Consensus 300 ~~L~~~---~~~~~~~p~~g~~~~~~l~--~~~----~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~ 368 (382)
T PRK06108 300 DALRAL---PGVEVAKPDGAMYAFFRIP--GVT----DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPAR 368 (382)
T ss_pred HHHHhC---CCCcccCCCeeEEEEEeCC--CCC----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHH
Confidence 666544 4555555665544 55553 111 1335667664 689999773 2689999665 8899
Q ss_pred HHHHHHhhhcc
Q psy8199 634 IQHMTSAIFQT 644 (965)
Q Consensus 634 i~~~~~~l~~~ 644 (965)
++++++++.+.
T Consensus 369 l~~~l~~l~~~ 379 (382)
T PRK06108 369 LDEAVERLRRF 379 (382)
T ss_pred HHHHHHHHHHH
Confidence 99999887653
No 176
>PRK07324 transaminase; Validated
Probab=99.85 E-value=9.5e-20 Score=205.12 Aligned_cols=334 Identities=14% Similarity=0.121 Sum_probs=210.6
Q ss_pred EEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcC-CCCCeEEEcCChhH
Q psy8199 248 LITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ-YKLGHCFYGSDGAS 325 (965)
Q Consensus 248 ~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~-~~~~~v~~~~sGse 325 (965)
-+|..|..++++..|-. .+. .++.+ +|+.+++... ..|....+. .+|.+.+++++. .+.++|++|+|+++
T Consensus 20 ~~~~~~~~~~~~~~~e~--~~~-~~~~~-~~~~~~~~~~~~~Y~~~~G~----~~lr~~ia~~~~~~~~~~vi~t~G~~~ 91 (373)
T PRK07324 20 TYDIAESCIDSLTLEEL--LAL-AGKNP-EAFYQELGQKKLTYGWIEGS----PEFKEAVASLYQNVKPENILQTNGATG 91 (373)
T ss_pred ccccccCCCCCCcHHHH--Hhc-cCcch-HHHHHHHhcCCccCCCCCCC----HHHHHHHHHHhcCCChhhEEEcCChHH
Confidence 45666777777755422 122 45566 8887777653 222222233 355555555542 35689999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|+..++..... ++++|++..++|..+.......+ ..+..+|.....+..
T Consensus 92 al~~~~~~l~~--------~gd~Vl~~~P~y~~~~~~~~~~g-------------~~v~~v~~~~~~~~~---------- 140 (373)
T PRK07324 92 ANFLVLYALVE--------PGDHVISVYPTYQQLYDIPESLG-------------AEVDYWQLKEENGWL---------- 140 (373)
T ss_pred HHHHHHHHhCC--------CCCEEEEcCCCchhHHHHHHHcC-------------CEEEEEecccccCCC----------
Confidence 99999886642 56889999999877632222221 123444432111110
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
.|++++++++. +++.+|++.. ++|++|.+. +++.+++|.++|++||+++|+||+|.++...+..... ....++
T Consensus 141 ~d~~~l~~~~~---~~~kli~i~~-p~NPtG~~~-~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~--~~~~~~ 213 (373)
T PRK07324 141 PDLDELRRLVR---PNTKLICINN-ANNPTGALM-DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSI--ADLYEK 213 (373)
T ss_pred CCHHHHHHhCC---CCCcEEEEeC-CCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCCh--hhccCC
Confidence 25677877664 2445566655 589999766 7788999999999999999999999987554322111 112233
Q ss_pred e---eeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHH----HHHH
Q psy8199 486 F---LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI----SQDM 558 (965)
Q Consensus 486 i---vt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~----~~~~ 558 (965)
. -+|||.++..++++|++++++++++.+.. .....+++.+++++.+|..+|+.. +.+.++. +++.
T Consensus 214 ~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~------~~~~~~~~~~~~~q~~a~~~l~~~--~~~l~~~~~~~~~~~ 285 (373)
T PRK07324 214 GISTNSMSKTYSLPGIRVGWIAANEEVIDILRK------YRDYTMICAGVFDDMLASLALEHR--DAILERNRKIVRTNL 285 (373)
T ss_pred EEEEecchhhcCCccceeEEEecCHHHHHHHHH------HhCcEEecCChHHHHHHHHHHcCH--HHHHHHHHHHHHHHH
Confidence 2 37899887322899999999999988875 233456677889998888887521 2233333 3344
Q ss_pred HHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeecC-----CEEEEeCCcccCHH
Q psy8199 559 KKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPIG-----NTVYLMPPYILNKN 632 (965)
Q Consensus 559 ~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~-----~~lR~~p~~~~t~~ 632 (965)
+.+.+.|+ +.+++..+.+.|.++.+... .... ...+++++|+ +.||.+.|+. +++|++ +..+++
T Consensus 286 ~~l~~~l~---~~~~~~~~~p~gg~~~~i~~-~~~~----~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis--~~~~~~ 355 (373)
T PRK07324 286 AILDEWVA---KEPRVSYVKPKAVSTSFVKL-DVDM----PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG--YCCDTE 355 (373)
T ss_pred HHHHHHHh---cCCCceEECCCceEEEEEEe-CCCC----CHHHHHHHHHHhcCEEEECccccCCCCeEEEE--ecCCHH
Confidence 44444443 34566666777654433322 1111 1335666654 7799999863 689999 667888
Q ss_pred HHHHHHHhhhccc
Q psy8199 633 EIQHMTSAIFQTF 645 (965)
Q Consensus 633 ~i~~~~~~l~~~~ 645 (965)
.+.+.++++.+.+
T Consensus 356 ~l~~~l~rl~~~l 368 (373)
T PRK07324 356 TLKKGLKKLSEFL 368 (373)
T ss_pred HHHHHHHHHHHHH
Confidence 8999988887654
No 177
>TIGR03471 HpnJ hopanoid biosynthesis associated radical SAM protein HpnJ. One of the well-described hopanoid intermediates is bacteriohopanetetrol. In the conversion from hopene several reactions must occur in the side chain for which a radical mechanism might be reasonable. These include the four (presumably anaerobic) hydroxylations and a methyl shift.
Probab=99.85 E-value=2.1e-20 Score=216.09 Aligned_cols=183 Identities=19% Similarity=0.273 Sum_probs=155.8
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC--CCCEEEEeeccCCCCcccHHHHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD--GATRFCMGAAWRELKDRDLDNIENMICEVK 760 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~--g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~ 760 (965)
..+.. |+|||++|.||+.+..... ..++.+++|.|+++++.+.+. |++.+.+.+..+. .+.+++.++++.++
T Consensus 198 ~~i~t-sRGCp~~C~FC~~~~~~~g--~~~r~rs~e~V~~Ei~~~~~~~~~~~~i~f~Dd~f~---~~~~~~~~l~~~l~ 271 (472)
T TIGR03471 198 ISLYT-GRGCPSKCTFCLWPQTVGG--HRYRTRSAESVIEEVKYALENFPEVREFFFDDDTFT---DDKPRAEEIARKLG 271 (472)
T ss_pred EEEEe-cCCCCCCCCCCCCCccCCC--CceEeCCHHHHHHHHHHHHHhcCCCcEEEEeCCCCC---CCHHHHHHHHHHHh
Confidence 34555 9999999999986643222 246778999999999988875 7899998766433 34567777777777
Q ss_pred hcCcEeEEec-CCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec-CCC
Q psy8199 761 KIGLETCLTL-GMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SES 837 (965)
Q Consensus 761 ~~~~~i~~~~-~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl-~et 837 (965)
+.++.+.+.. ..++++.++.|+++|+.++.+|+|| +++.++.++++++.++..++++.++++|+.+..++|+|+ +||
T Consensus 272 ~~~i~~~~~~~~~~~~e~l~~l~~aG~~~v~iGiES~s~~~L~~~~K~~~~~~~~~~i~~~~~~Gi~v~~~~IiGlPget 351 (472)
T TIGR03471 272 PLGVTWSCNARANVDYETLKVMKENGLRLLLVGYESGDQQILKNIKKGLTVEIARRFTRDCHKLGIKVHGTFILGLPGET 351 (472)
T ss_pred hcCceEEEEecCCCCHHHHHHHHHcCCCEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHCCCeEEEEEEEeCCCCC
Confidence 7776654432 3479999999999999999999999 999999999999999999999999999999999999999 799
Q ss_pred HHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC
Q psy8199 838 RDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG 873 (965)
Q Consensus 838 ~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~ 873 (965)
.+++.++++++.+++ ++.+.++.++|.||||+++
T Consensus 352 ~e~~~~ti~~~~~l~--~~~~~~~~l~P~PGT~l~~ 385 (472)
T TIGR03471 352 RETIRKTIDFAKELN--PHTIQVSLAAPYPGTELYD 385 (472)
T ss_pred HHHHHHHHHHHHhcC--CCceeeeecccCCCcHHHH
Confidence 999999999999999 8999999999999999874
No 178
>TIGR01579 MiaB-like-C MiaB-like tRNA modifying enzyme. This clade is a member of a subfamily (TIGR00089) and spans low GC Gram positive bacteria, alpha and epsilon proteobacteria, Campylobacter, Porphyromonas, Aquifex, Thermotoga, Chlamydia, Treponema and Fusobacterium.
Probab=99.85 E-value=4.1e-20 Score=209.94 Aligned_cols=201 Identities=12% Similarity=0.186 Sum_probs=163.2
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCccc---HHHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRD---LDNIENMICEV 759 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~---~~~~~~~~~~i 759 (965)
..+.+ |+|||++|.||..+...+ +++.+++++|+++++.+.+.|++++.|++........+ ..++.++++.+
T Consensus 140 ~~i~i-srGCp~~CsfC~~~~~~g----~~r~r~~e~I~~Ei~~l~~~g~~ei~l~~~~~~~y~~d~~~~~~l~~Ll~~l 214 (414)
T TIGR01579 140 AFIKV-QDGCNFFCSYCIIPFARG----RSRSVPMEAILKQVKILVAKGYKEIVLTGVNLGSYGDDLKNGTSLAKLLEQI 214 (414)
T ss_pred EEEEe-ccCcCCCCCCCceeeecC----CCccCCHHHHHHHHHHHHHCCCceEEEeeEccchhccCCCCCCcHHHHHHHH
Confidence 45677 999999999998765332 46678999999999999999999999987543211111 24567777777
Q ss_pred Hhc-Cc-EeE---EecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHH--cCCceeee
Q psy8199 760 KKI-GL-ETC---LTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRN--VGINICCG 829 (965)
Q Consensus 760 ~~~-~~-~i~---~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~--~Gi~v~~~ 829 (965)
++. ++ .+. +++..++++.++.|+++| +.++++++|| ++++++.|+++++.+++.++++.+++ .|+.+.++
T Consensus 215 ~~~~~~~~ir~~~~~p~~~~~ell~~m~~~~~~~~~l~lglESgs~~vLk~m~R~~~~~~~~~~v~~l~~~~~gi~i~~~ 294 (414)
T TIGR01579 215 LQIPGIKRIRLSSIDPEDIDEELLEAIASEKRLCPHLHLSLQSGSDRVLKRMRRKYTRDDFLKLVNKLRSVRPDYAFGTD 294 (414)
T ss_pred hcCCCCcEEEEeCCChhhCCHHHHHHHHhcCccCCCeEECCCcCChHHHHhcCCCCCHHHHHHHHHHHHHhCCCCeeeee
Confidence 653 32 222 245667999999999987 8899999999 99999999999999999999999999 89999999
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHHHHHHHHHHHH
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPLEFIRTIAVAR 890 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~~~~~~ia~~R 890 (965)
+|+|+ |||.|++.++++++.+++ ++.+.++.|.|.||||++..+ ..+.....+.....+
T Consensus 295 ~IvG~PgET~ed~~~tl~~i~~~~--~~~~~~~~~sp~pGT~~~~~~~~v~~~~~~~r~~~l~ 355 (414)
T TIGR01579 295 IIVGFPGESEEDFQETLRMVKEIE--FSHLHIFPYSARPGTPASTMKDKVPETIKKERVKRLK 355 (414)
T ss_pred EEEECCCCCHHHHHHHHHHHHhCC--CCEEEeeecCCCCCCchhhCCCCCCHHHHHHHHHHHH
Confidence 99999 799999999999999999 999999999999999999865 456654444444333
No 179
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.85 E-value=1.8e-20 Score=199.60 Aligned_cols=342 Identities=15% Similarity=0.139 Sum_probs=221.3
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhc-c-c--cccCC-CCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKL-E-H--VMLSN-LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEV 329 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~-~--~~~~~-~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~ 329 (965)
-|+|..+... -+|++++++...+... + . .+..+ ......++..+.+++.++...++++||+||||++..
T Consensus 3 iYlD~~ATTp------~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNl 76 (386)
T COG1104 3 IYLDNAATTP------VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNL 76 (386)
T ss_pred ccccccccCC------CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHH
Confidence 5999988765 5899999999988764 1 1 11111 123445667778899998888999999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
||+.+....+.+ .++.+||+. ..-|-....+.... .....++.++|... .+. .|++
T Consensus 77 aI~g~~~a~~~~--~~~~HIIts-~iEH~aVl~~~~~L---------e~~g~~Vtyl~V~~-~G~-----------v~~e 132 (386)
T COG1104 77 AIKGAALAYRNA--QKGKHIITS-AIEHPAVLNTCRYL---------ERQGFEVTYLPVDS-NGL-----------VDLE 132 (386)
T ss_pred HHHhhHHhhhcc--cCCCeEEEc-ccccHHHHHHHHHH---------HhcCCeEEEeCCCC-CCe-----------EcHH
Confidence 999754432221 234555554 35555433322211 11234566666543 222 4899
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeee
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL 489 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~ 489 (965)
+|+++|+ +++..|-+-- +||++|+++| +++|.++|+++|+++++|-||+ +|+. ..+......|+++|
T Consensus 133 ~L~~al~---~~T~LVSim~-aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gki----pi~~~~~~vD~ls~ 199 (386)
T COG1104 133 QLEEALR---PDTILVSIMH-ANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKI----PIDLEELGVDLLSF 199 (386)
T ss_pred HHHHhcC---CCceEEEEEe-cccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCce----eccccccCcceEEe
Confidence 9999996 4466666666 8999999999 9999999999999999999996 8765 33333444799999
Q ss_pred ccccCCCcccceeeeecHHH-HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHH
Q psy8199 490 SKGITGGYLPLSLVMTTDKI-YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKITKALT 566 (965)
Q Consensus 490 sK~l~gG~~pig~v~~~~~i-~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~~~~~~~~~~~~~~l~~~L~ 566 (965)
|-.--+|.-.+|+++.++.+ ...+..+|.+.....++|- |..+.++..++++... .+...++++.++++|.+.|.
T Consensus 200 SaHK~~GpkGiGaLyv~~~~~~~p~i~GGgQE~g~RsGTe--nv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~ 277 (386)
T COG1104 200 SAHKFGGPKGIGALYVRPGVRLEPLIHGGGQERGLRSGTE--NVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLL 277 (386)
T ss_pred ehhhccCCCceEEEEECCCCccCceeccCcCCCCCCCCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98666666789999987654 3444444444444555665 4555555555665433 24467888899999999997
Q ss_pred cccCCCcee---e-eeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEe------------------------ecC
Q psy8199 567 SLITHPKII---N-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR------------------------PIG 618 (965)
Q Consensus 567 ~l~~~~~i~---~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~------------------------~~~ 618 (965)
+.. |.+. . .........+.+. . -..+.+...|..+||.+. ...
T Consensus 278 ~~~--p~~~~~g~~~~rlP~~~~~~f~--g-----v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~ 348 (386)
T COG1104 278 EII--PDVYLNGDDEPRLPNILNFSFP--G-----VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAH 348 (386)
T ss_pred hcC--CcEEEcCCcccCCCCeEEEEeC--C-----CcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhC
Confidence 641 1110 0 0111112222222 0 002223334444455443 223
Q ss_pred CEEEEeCCcccCHHHHHHHHHhhhcccccHHH
Q psy8199 619 NTVYLMPPYILNKNEIQHMTSAIFQTFNELDE 650 (965)
Q Consensus 619 ~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~~e 650 (965)
+.|||+.....++++++.+++.+.+....+++
T Consensus 349 ~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 349 GSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred ccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 68999999999999999999998876655443
No 180
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.85 E-value=1.3e-19 Score=199.93 Aligned_cols=298 Identities=11% Similarity=0.010 Sum_probs=197.6
Q ss_pred CCC-CCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCc
Q psy8199 268 FGH-SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNK 346 (965)
Q Consensus 268 lGh-~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~ 346 (965)
||. .||+|.+|..+++++. ++.++...+|+++++++++.+.+++++++||++|+..++..... ++
T Consensus 30 lgl~~~~~~~~~~~~~~~~~------~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~--------~g 95 (346)
T TIGR03576 30 TGLAGGFKIDEEDLELLETY------VGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEP--------PG 95 (346)
T ss_pred ccCCCChhHHHHHHHHHHHh------cCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCC--------CC
Confidence 444 4999999999998885 24668899999999999976668999999999999999986643 45
Q ss_pred eEEEEEc--CCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEE
Q psy8199 347 KKFICLQ--NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA 424 (965)
Q Consensus 347 ~~vi~~~--~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aa 424 (965)
++|++.. ..+|.+-.......+. ..+.. +++++++. . .+..+
T Consensus 96 d~Vli~~~d~p~~~s~~~~~~l~ga--------------~~~~~-----------------~~l~~l~~----~-~~~~l 139 (346)
T TIGR03576 96 RKVVHYLPEKPAHPSIPRSCKLAGA--------------EYFES-----------------DELSELKK----I-DGTSL 139 (346)
T ss_pred CEEEECCCCCCCchhHHHHHHHcCC--------------EEecc-----------------CCHHHHhh----C-cCceE
Confidence 6777532 2344442222222221 11111 12333322 1 23456
Q ss_pred EEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcc---cccccccccCCCccee--eeccccCCCccc
Q psy8199 425 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT---GKFFACEHAEIWPDFL--CLSKGITGGYLP 499 (965)
Q Consensus 425 ii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~---G~~~~~~~~~~~pDiv--t~sK~l~gG~~p 499 (965)
|++++ .++.|.+. +.+.|++|.++|++||+++|+||+|.. |.. |.. ....++ +|++ ||||+|+| ++
T Consensus 140 Iiitg--~s~~G~v~-~~~~L~~i~~la~~~~~~livDEAy~~-~~~~~~~~~-~~~~~~--~divv~s~SKalaG--~r 210 (346)
T TIGR03576 140 VVITG--STMDLKVV-SEEDLKRVIKQAKSKEAIVLVDDASGA-RVRRLYGQP-PALDLG--ADLVVTSTDKLMDG--PR 210 (346)
T ss_pred EEEEC--CCCCCccc-CHHHHHHHHHHHHHcCCEEEEECCccc-cccccCCCC-CHHHcC--CcEEEeccchhccc--cc
Confidence 77777 57788775 466699999999999999999999963 222 221 112233 4655 68998877 68
Q ss_pred ceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeeec
Q psy8199 500 LSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQ 579 (965)
Q Consensus 500 ig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g 579 (965)
+|++++++++++.+.. +.....++.+|++++++.++|+.+..+...+.++++.+.+.+.++.+ ...+.
T Consensus 211 ~G~v~~~~~li~~l~~------~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~------~~~~~ 278 (346)
T TIGR03576 211 GGLLAGRKELVDKIKS------VGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL------NVERT 278 (346)
T ss_pred eEEEEeCHHHHHHHHH------hhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC------CCCcC
Confidence 9999999999998876 12223344688899999999986544445666777777776666643 11222
Q ss_pred eeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec------CCEEEEeCCcccCHH---HHHHHHHhhhcc
Q psy8199 580 KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------GNTVYLMPPYILNKN---EIQHMTSAIFQT 644 (965)
Q Consensus 580 ~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~lR~~p~~~~t~~---~i~~~~~~l~~~ 644 (965)
.+.|+.+.+. .. ...+...+.|.++||+++|+ ++++||+ +...++ +.+.+++++++.
T Consensus 279 ~~~f~~~~~~-~~-----~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis--~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 279 PTGFVIKGVE-EE-----KLIEIGLDLLRNYGIITITAVGMPGASKTLRFD--LAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred CCeEEEEeCC-CC-----CHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEE--EecChHHhcCHHHHHHHHHhc
Confidence 3446555553 11 01223456677899999983 3689999 444443 688888887654
No 181
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.85 E-value=2e-19 Score=210.93 Aligned_cols=342 Identities=13% Similarity=0.128 Sum_probs=218.5
Q ss_pred cCCcccccccccchhccCCC-CCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHH
Q psy8199 251 FSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 327 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh-~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~ 327 (965)
..|+.++++..|.. .++|. .++++++++.+++.....|....+..+.++.+++.+.+..+ ...++|++++|+++|+
T Consensus 143 ~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal 221 (517)
T PRK13355 143 AAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELI 221 (517)
T ss_pred HcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHH
Confidence 46888999988754 45675 37789999988876554454444556667777777655432 3567999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARC 406 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 406 (965)
..++++... +++.|++.+++|..+...+...++ ..+.++.... .+. .
T Consensus 222 ~~~~~~l~~--------~Gd~Vli~~P~y~~y~~~~~~~g~-------------~~v~~~~~~~~~~~-----------~ 269 (517)
T PRK13355 222 NLSMSALLD--------DGDEVLIPSPDYPLWTACVNLAGG-------------TAVHYRCDEQSEWY-----------P 269 (517)
T ss_pred HHHHHHhCC--------CCCEEEEcCCCCcCHHHHHHHCCC-------------EEEEeecCcccCCC-----------C
Confidence 999886643 568899999999888544433332 1223332111 111 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-cccccccCCCcc
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHAEIWPD 485 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pD 485 (965)
|++++++++.. ...+.++++| +|++|.+. +.+.+++|.++|++||+++|+||+|..|-..|. +.... .+.||
T Consensus 270 d~~~l~~~~~~--~~k~i~i~nP--~NPTG~v~-~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~--~~~~~ 342 (517)
T PRK13355 270 DIDDIRSKITS--RTKAIVIINP--NNPTGALY-PREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIA--SLAPD 342 (517)
T ss_pred CHHHHHHhcCc--CceEEEEECC--CCCCCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHH--HhCCC
Confidence 67888887752 2335566666 89999876 688899999999999999999999987744442 11111 12345
Q ss_pred e--e---eeccccCCCcccceeeeec--HHH----HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHHH-
Q psy8199 486 F--L---CLSKGITGGYLPLSLVMTT--DKI----YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQ- 552 (965)
Q Consensus 486 i--v---t~sK~l~gG~~pig~v~~~--~~i----~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~- 552 (965)
+ + +|||.++-.+|++|+++++ +++ ++.+.. .....++.|.+++.++.++|+-... ++..+
T Consensus 343 ~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~ 415 (517)
T PRK13355 343 LFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNM-------LANMRLCSNVPAQSIVQTALGGHQSVKDYLVP 415 (517)
T ss_pred CeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHH-------HhcCcCCcChHHHHHHHHHhcCCccHHHHHHH
Confidence 3 2 4799754322899999853 443 333321 1122345678888888888842110 11222
Q ss_pred --HHHHHHHHHHHHHHcccCCCceeeeeceeEEEEE-EEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEE
Q psy8199 553 --RISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVY 622 (965)
Q Consensus 553 --~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i-~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR 622 (965)
+..++.+++.+.|++ .+++....+.|.|+.+ .+. ............+.+.|.++||.+.|+ .+++|
T Consensus 416 ~~~~~~~r~~l~~~L~~---~~g~~~~~p~g~fy~~~~l~-~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~R 491 (517)
T PRK13355 416 GGRVYEQRELVYNALNA---IPGISAVKPKAAFYIFPKID-VKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFR 491 (517)
T ss_pred HHHHHHHHHHHHHHHhc---CCCcccCCCCeeeEEEeecC-cccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEE
Confidence 233344555555544 4667777888988776 342 100000011223345677899999874 26899
Q ss_pred EeCCcccCHHHHHHHHHhhhccc
Q psy8199 623 LMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 623 ~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
++ +..+++.+++.++++.+.+
T Consensus 492 is--~~~~~~~l~~a~~rl~~~~ 512 (517)
T PRK13355 492 VV--YLPRLEDLEDAMDRLADFF 512 (517)
T ss_pred EE--eCCCHHHHHHHHHHHHHHH
Confidence 99 6788899999998887654
No 182
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=1.2e-19 Score=204.84 Aligned_cols=323 Identities=15% Similarity=0.144 Sum_probs=211.3
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al 331 (965)
++++++|+.++. +++| .+|.+.+++.+.+.....+ +.....++.+.+++.++.+.+++++++|+++++..++
T Consensus 30 ~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y-----~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~ 101 (367)
T PRK02731 30 GIADIIKLASNE--NPLG-PSPKAIEAIRAAADELHRY-----PDGSGFELKAALAEKFGVDPERIILGNGSDEILELLA 101 (367)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHHHhhcCC-----CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHH
Confidence 677899998873 4577 5788999999887654332 2222357888888888766789999999999988877
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
.... .+++.|++.+++|.++.......+ ..+..+|..+ .. .|++++
T Consensus 102 ~~l~--------~~gd~vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~--~~-----------~~~~~l 147 (367)
T PRK02731 102 RAYL--------GPGDEVIYSEHGFAVYPIAAQAVG-------------AKPVEVPAKD--YG-----------HDLDAM 147 (367)
T ss_pred HHhc--------CCCCEEEEecCCHHHHHHHHHHcC-------------CeEEEecccC--CC-----------CCHHHH
Confidence 6553 256789999999976643222211 1222333211 11 267888
Q ss_pred HHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-cccccccCCCccee---
Q psy8199 412 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHAEIWPDFL--- 487 (965)
Q Consensus 412 e~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pDiv--- 487 (965)
++.+.+ ++.+|++.. ++|++|.+.+ .+.+.++.+.|+ +|+++|+||+|..+...+. ..+....+..++++
T Consensus 148 ~~~~~~---~~~~v~l~~-p~nptG~~~~-~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 148 LAAVTP---RTRLVFIAN-PNNPTGTYLP-AEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred HHHhCC---CCcEEEEeC-CCCCCCcCCC-HHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 887752 344454444 5999998875 444555555443 5999999999987654332 22223333345666
Q ss_pred eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHH
Q psy8199 488 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKAL 565 (965)
Q Consensus 488 t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L 565 (965)
+|||.++ .| +++|++++++++++.+.. ...+++.+++++.++.+.|+... -+...+..+++.+++.+.|
T Consensus 222 S~SK~~g~~G-~RiG~l~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L 292 (367)
T PRK02731 222 TFSKAYGLAG-LRVGYGIAPPEIIDALNR--------VRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFL 292 (367)
T ss_pred eehHhhcCcc-cceeeeeCCHHHHHHHHH--------ccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899886 45 899999999999988865 12346678889988888885211 0123344444555555555
Q ss_pred HcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-----CEEEEeCCcccCHHHHHHHHHh
Q psy8199 566 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-----NTVYLMPPYILNKNEIQHMTSA 640 (965)
Q Consensus 566 ~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~lR~~p~~~~t~~~i~~~~~~ 640 (965)
++. ++...++.|.++++.+. +. ..+.++.+.|.++||.+++.. +++|+++ .+.++++.++++
T Consensus 293 ~~~----g~~~~~~~g~~~~i~~~--~~----~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~e~~~l~~a 359 (367)
T PRK02731 293 AEL----GLEYIPSVGNFILVDFD--DG----KDAAEAYQALLKRGVIVRPVAGYGLPNALRITI---GTEEENRRFLAA 359 (367)
T ss_pred HHC----CCccCCCCceEEEEECC--CC----CCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEec---CCHHHHHHHHHH
Confidence 543 33334556888888763 11 114467788899999998752 6899994 477889998888
Q ss_pred hhcc
Q psy8199 641 IFQT 644 (965)
Q Consensus 641 l~~~ 644 (965)
+.+.
T Consensus 360 L~~~ 363 (367)
T PRK02731 360 LKEF 363 (367)
T ss_pred HHHH
Confidence 7654
No 183
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.85 E-value=5.3e-19 Score=201.22 Aligned_cols=340 Identities=10% Similarity=0.047 Sum_probs=215.7
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC--CCC-CeEEEcCChhHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKL-GHCFYGSDGASAVE 328 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~-~~v~~~~sGseA~~ 328 (965)
+..+|+..|... +++ .+|.+.+++.+.+... ..|....+..+.+..+++.+.+..+ ... ++|++++|+++|+.
T Consensus 39 ~~~i~l~~g~~~-~~~-p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDVD-AHE-PTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCCC-CCC-CCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 345566555332 232 5678888888877653 2244344566788889998888766 345 78999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.+++.... +++.|++.+++|.++.......+. .+..++..... . +.-...|+
T Consensus 117 ~~~~~l~~--------~Gd~Vlv~~P~y~~~~~~~~~~g~-------------~v~~v~~~~~~--~-----~~~~~~d~ 168 (405)
T PRK06207 117 LAVAATVA--------RGDKVAIVQPDYFANRKLVEFFEG-------------EMVPVQLDYLS--A-----DKRAGLDL 168 (405)
T ss_pred HHHHHhcC--------CCCEEEEeCCCchhHHHHHHHcCC-------------EEEEEeccccC--c-----ccCCCcCH
Confidence 99887643 568899999999887433322221 22223321000 0 00000367
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-cccccCCC-cce
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIW-PDF 486 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~~~-pDi 486 (965)
++|++++++. ..+.+++.| +|++|.+. +.+.+++|.++|++||+++|+||+|..|...|..+ ....+... +.+
T Consensus 169 ~~l~~~~~~~--~k~v~l~~P--~NPTG~~~-s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~v 243 (405)
T PRK06207 169 DQLEEAFKAG--VRVFLFSNP--NNPAGVVY-SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENV 243 (405)
T ss_pred HHHHHhhhhc--CeEEEECCC--CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcE
Confidence 8888887532 224455666 89999877 67779999999999999999999999875444321 12122222 233
Q ss_pred e---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--cccHHHHHHHHHHH
Q psy8199 487 L---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKK 560 (965)
Q Consensus 487 v---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~~~~~~~~~~~~~~ 560 (965)
+ +|||.++ .| +++|++++++++++.+.. .....+.+.+.++++++.++|+.-. -+...+..+++.+.
T Consensus 244 i~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~ 316 (405)
T PRK06207 244 ITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEK------LQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDD 316 (405)
T ss_pred EEEecchhhccCcc-cceEEEEcCHHHHHHHHH------HHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 3 5899887 45 899999999999888865 1122344556778888877775210 01223334444444
Q ss_pred HHHHHHcccCCCceeeeece-eEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCcccCH
Q psy8199 561 ITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNK 631 (965)
Q Consensus 561 l~~~L~~l~~~~~i~~v~g~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~t~ 631 (965)
+.+.|+. .+++....+. |+++++.+. ... .....+.+.|. ++||.+.|+ .+++|++ +..+.
T Consensus 317 l~~~L~~---~~~~~~~~p~gg~fl~~~l~-~~~----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris--~~~~~ 386 (405)
T PRK06207 317 LLRVLRG---VEGVFVRAPQAGSYLFPRLP-RLA----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLN--FSQDH 386 (405)
T ss_pred HHHHHhc---CCCceecCCCeeEEEEEeCc-ccC----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEE--ecCCH
Confidence 5555543 3445544454 567766664 110 01345777776 689999874 2689999 55678
Q ss_pred HHHHHHHHhhhccc
Q psy8199 632 NEIQHMTSAIFQTF 645 (965)
Q Consensus 632 ~~i~~~~~~l~~~~ 645 (965)
+++++.++++.+.+
T Consensus 387 ~~l~~al~rl~~~l 400 (405)
T PRK06207 387 AAAVAAAERIAQLI 400 (405)
T ss_pred HHHHHHHHHHHHHH
Confidence 88999888887644
No 184
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.85 E-value=1.1e-19 Score=203.52 Aligned_cols=317 Identities=14% Similarity=0.188 Sum_probs=207.8
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 333 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~ 333 (965)
.+.|||.+|. ++++ .+|++++|+.+++.....+ ......++.+.++++++.+.+++++++|+++++..+++.
T Consensus 19 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y-----~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~ 90 (346)
T TIGR01141 19 KEVIKLNSNE--NPFG-PPPKAKEALRAEADKLHRY-----PDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRA 90 (346)
T ss_pred CceEEccCCC--CCCC-CCHHHHHHHHHhHHHhhcC-----CCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHH
Confidence 4799998773 3566 4789999999887543222 222236777888888876678999999999999888776
Q ss_pred HHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy8199 334 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 413 (965)
Q Consensus 334 a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 413 (965)
... ++++|++.+++|..+....... ...+..+|.... +. .|++++++
T Consensus 91 l~~--------~gd~v~~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~-~~-----------~d~~~l~~ 137 (346)
T TIGR01141 91 FLE--------PGDAVLVPPPTYSMYEISAKIH-------------GAEVVKVPLDED-GQ-----------LDLEDILV 137 (346)
T ss_pred hcC--------CCCEEEEcCCCHHHHHHHHHHc-------------CCeEEEeccCCC-CC-----------CCHHHHHH
Confidence 532 5688999999885442211111 112333333211 11 36788877
Q ss_pred HHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---eec
Q psy8199 414 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLS 490 (965)
Q Consensus 414 ~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~s 490 (965)
++. +++++|+++. ++|++|.+.+ .+.+.++.+.|+ +|+++|+||+|.++...+... ......++++ ++|
T Consensus 138 ~~~---~~~~~v~l~~-p~NptG~~~~-~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~S~s 209 (346)
T TIGR01141 138 AID---DKPKLVFLCS-PNNPTGNLLS-RSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLRTLS 209 (346)
T ss_pred hcC---CCCCEEEEeC-CCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEehhh
Confidence 653 3456666665 5899998875 443444444444 499999999998765322211 1112234544 689
Q ss_pred cccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHccc
Q psy8199 491 KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSLI 569 (965)
Q Consensus 491 K~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~l~ 569 (965)
|.++.+++++|++++++++++.+.. ...+++.+++++.++.+.++... -....++++++.+++.+.|+++
T Consensus 210 K~~g~~G~r~G~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 280 (346)
T TIGR01141 210 KAFGLAGLRIGYAIANAEIIDALNK--------VRAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL- 280 (346)
T ss_pred HhhhchhhhceeeecCHHHHHHHHh--------ccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9985433899999999999888765 12356678999998888875432 1234555666666666666543
Q ss_pred CCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec------CCEEEEeCCcccCHHHHHHHHHhh
Q psy8199 570 THPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 570 ~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
+++....+.|.++.+++. + .++++.+.|.++||.+.++ .+++|++++ ++++++++++.+
T Consensus 281 --~g~~~~~~~g~~~~~~~~--~------~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l 345 (346)
T TIGR01141 281 --PGLEVYPSDANFVLIRFP--R------DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAAL 345 (346)
T ss_pred --CCCEECCCcCCEEEEecC--C------CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHh
Confidence 455444456777777764 1 1456788899999999874 378999943 788999888765
No 185
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=99.84 E-value=4.4e-20 Score=213.45 Aligned_cols=180 Identities=12% Similarity=0.167 Sum_probs=153.6
Q ss_pred eEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH-CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc
Q psy8199 684 LLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS-DGATRFCMGAAWRELKDRDLDNIENMICEVKKI 762 (965)
Q Consensus 684 ~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~-~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~ 762 (965)
.++. |+|||++|.||+.+..+ .+++.++++.|+++++.+.+ .|++.|.+.+.... .+.+++.++++.+.+.
T Consensus 196 ~i~t-SRGCp~~C~FC~~~~~~----~~~R~rs~e~Vv~Ei~~l~~~~gv~~~~~~Dd~f~---~~~~~~~~l~~~l~~~ 267 (497)
T TIGR02026 196 VPNF-ARGCPFTCNFCSQWKFW----RRYRHRDPKKFVDEIEWLVRTHGVGFFILADEEPT---INRKKFQEFCEEIIAR 267 (497)
T ss_pred eeec-cCCCCCCCCCCCCCCCC----ceeecCCHHHHHHHHHHHHHHcCCCEEEEEecccc---cCHHHHHHHHHHHHhc
Confidence 3555 99999999999977542 35777899999999998865 69999999777543 3356777888877754
Q ss_pred C---cEeEE--ecCCC--CHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec
Q psy8199 763 G---LETCL--TLGML--NENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL 834 (965)
Q Consensus 763 ~---~~i~~--~~~~~--~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl 834 (965)
+ +.+.+ +...+ +++.++.|+++|+.++.+|+|| +++.++.+++.++.++..++++.++++||.+..++|+|+
T Consensus 268 ~~l~i~w~~~~r~~~i~~d~ell~~l~~aG~~~v~iGiES~~~~~L~~~~K~~t~~~~~~ai~~l~~~Gi~~~~~~I~G~ 347 (497)
T TIGR02026 268 NPISVTWGINTRVTDIVRDADILHLYRRAGLVHISLGTEAAAQATLDHFRKGTTTSTNKEAIRLLRQHNILSEAQFITGF 347 (497)
T ss_pred CCCCeEEEEecccccccCCHHHHHHHHHhCCcEEEEccccCCHHHHHHhcCCCCHHHHHHHHHHHHHCCCcEEEEEEEEC
Confidence 3 33333 33333 8899999999999999999999 999999999999999999999999999999999999999
Q ss_pred -CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC
Q psy8199 835 -SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG 873 (965)
Q Consensus 835 -~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~ 873 (965)
+||.+++.++++++.+++ ++.+.++.++|.||||+++
T Consensus 348 P~et~e~~~~t~~~~~~l~--~~~~~~~~~tP~PGT~l~~ 385 (497)
T TIGR02026 348 ENETDETFEETYRQLLDWD--PDQANWLMYTPWPFTSLFG 385 (497)
T ss_pred CCCCHHHHHHHHHHHHHcC--CCceEEEEecCCCCcHHHH
Confidence 799999999999999999 9999999999999999864
No 186
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.84 E-value=9.4e-19 Score=199.41 Aligned_cols=333 Identities=11% Similarity=0.061 Sum_probs=214.4
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhcccccc-CCCCcHHHHHHHHHHHhhcC--CCC-CeEEEcCChhHHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQ--YKL-GHCFYGSDGASAV 327 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~--~~~-~~v~~~~sGseA~ 327 (965)
.|..++|+..|.. .++ .++.+.+++.+.+.....+.. ..+..+.+..+++.+.+..+ .+. ++|++|+|+++|+
T Consensus 30 ~~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 30 AGHKMIDLSIGNP--DMP-PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 3668899887743 344 477888898887754322221 23455667777777776543 355 6899999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 407 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 407 (965)
..++++..+ +++.|++.+++|.++...+...+. .+..+|........ .|
T Consensus 107 ~~~~~~~~~--------~Gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~----------~d 155 (399)
T PRK07681 107 VHLPMVYAN--------PGDIILVPDPGYTAYETGIQMAGA-------------TSYYMPLKKENDFL----------PD 155 (399)
T ss_pred HHHHHHhCC--------CCCEEEECCCCccchHHHHHhcCC-------------EEEEEecCCCCCCc----------CC
Confidence 998876643 568899999999887443333222 23333332111100 25
Q ss_pred HHHHHHHHHhCCCcEEEEEEc-cccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-cc-ccccCCCc
Q psy8199 408 IFDLEILLKKNHNKIAAIIIE-PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FA-CEHAEIWP 484 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~e-p~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~-~~~~~~~p 484 (965)
++++++.+. +++.+|++. | +|++|.+. +.+.+++|.++|++||+++|.||+|..|-..+.. .. ....+...
T Consensus 156 ~~~l~~~~~---~~~k~v~l~~P--~NPTG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~ 229 (399)
T PRK07681 156 LELIPEEIA---DKAKMMILNFP--GNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKE 229 (399)
T ss_pred HHHHHHhcc---ccceEEEEeCC--CCCcCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcc
Confidence 677777664 234445544 6 89999876 6777999999999999999999999877433321 11 11111111
Q ss_pred c---eeeeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHH
Q psy8199 485 D---FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDM 558 (965)
Q Consensus 485 D---ivt~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~ 558 (965)
. +-+|||.++ .| +++|++++++++++.+.. .....+++.+.+++.++.++|+.-.+ +...+.++++.
T Consensus 230 ~~i~~~S~SK~~~~~G-lRiG~~i~~~~l~~~~~~------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK07681 230 VGVEINSLSKSYSLAG-SRIGYMIGNEEIVRALTQ------FKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERR 302 (399)
T ss_pred cEEEEeecccccCCcc-ceeEEEecCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 2 237899886 45 899999999999988865 12224566778888888888853110 12233445555
Q ss_pred HHHHHHHHcccCCCceeeeece-eEEEEEEEeecCccchhhHHHHHHHHHHH-cCcEEeec-------CCEEEEeCCccc
Q psy8199 559 KKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-------GNTVYLMPPYIL 629 (965)
Q Consensus 559 ~~l~~~L~~l~~~~~i~~v~g~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-------~~~lR~~p~~~~ 629 (965)
+.+.+.|++. ++....+. |.++.+.+. +. ....++.+.+++ +||.+.|+ .+++|++ +..
T Consensus 303 ~~l~~~L~~~----g~~~~~p~~g~f~~~~l~--~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~~ 370 (399)
T PRK07681 303 DTLVDGFRTF----GWNVDKPAGSMFVWAEIP--KG----WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIA--LVQ 370 (399)
T ss_pred HHHHHHHHHC----CCcccCCCeeeEEEEECC--CC----CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEE--ecC
Confidence 5566666543 34333343 566666553 21 113457677766 89999873 2589999 556
Q ss_pred CHHHHHHHHHhhhc
Q psy8199 630 NKNEIQHMTSAIFQ 643 (965)
Q Consensus 630 t~~~i~~~~~~l~~ 643 (965)
++++++++++++.+
T Consensus 371 ~~~~~~~~l~~l~~ 384 (399)
T PRK07681 371 DEEVLQQAVENIRN 384 (399)
T ss_pred CHHHHHHHHHHHHH
Confidence 78999999999875
No 187
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=5.1e-19 Score=199.63 Aligned_cols=328 Identities=10% Similarity=0.058 Sum_probs=204.7
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhc---cccccCCCCcHHHHHHHHHHHhhc----CCCCCeEEEcCChhHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL---EHVMLSNLTHKPVIKLSEKLSSLT----QYKLGHCFYGSDGASA 326 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~---~~~~~~~~~~~~~~~la~~l~~~~----~~~~~~v~~~~sGseA 326 (965)
..++|+.+|. .+++ .+|.+.+++.+.++.. .+|. ..+..+.+..+++.+.+.. ..+.++|++|+|+++|
T Consensus 28 ~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 28 IQLDRLDTNE--FPYD-LPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred cceeEecCCC--CCCC-CCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 4588887763 3444 5788999999876652 2232 1233344455555554432 1456789999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..++..... ++.++|++.+++|.++...+...+. .+..++....... .
T Consensus 104 l~~~~~~~~~-------~g~~~Vlv~~P~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~-----------~ 152 (374)
T PRK02610 104 IRSLLIATCL-------GGEGSILVAEPTFSMYGILAQTLGI-------------PVVRVGRDPETFE-----------I 152 (374)
T ss_pred HHHHHHHHcC-------CCCCeEEEcCCChHHHHHHHHHcCC-------------EEEEecCCcccCC-----------C
Confidence 9877765432 2334799999999887443333221 2233332211111 2
Q ss_pred HHHHHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 407 AIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 407 d~~~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
|+++|++++.+. ..++.+|++.+ ++|++|.+. +.+.+++|.++| +++++|.||+|..|..... .....-.++
T Consensus 153 d~~~l~~~~~~~~~~~~k~i~l~~-P~NPTG~~~-s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~---~~~~~~~~~ 225 (374)
T PRK02610 153 DLAAAQSAIEQTQNPPVRVVFVVH-PNSPTGNPL-TAAELEWLRSLP--EDILVVIDEAYFEFSQTTL---VGELAQHPN 225 (374)
T ss_pred CHHHHHHHHHhhcCCCceEEEEeC-CCCCCCCCC-CHHHHHHHHhcc--CCcEEEEeccccccCccch---HHHHhcCCC
Confidence 678888887632 13456665555 599999887 566688888877 4999999999987732111 111111244
Q ss_pred ee---eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHH---HH
Q psy8199 486 FL---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQD---MK 559 (965)
Q Consensus 486 iv---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~---~~ 559 (965)
++ +|||.++..++++|++++++++++.+..- ...++.+.+++.++.++|+.. +.+.+++++. .+
T Consensus 226 ~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~--------~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~ 295 (374)
T PRK02610 226 WVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKV--------RLPYNLPSFSQLAAQLALEHR--QELLAAIPEILQERD 295 (374)
T ss_pred EEEEEecchhccCcccceeeeecCHHHHHHHHHh--------cCCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHH
Confidence 44 68998853228999999999999888651 123556888888888887532 2233333332 33
Q ss_pred HHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHH
Q psy8199 560 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTS 639 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~ 639 (965)
.+.+.|+. .+++...+..|.++++.+. +. .....+.+.|.++||.+++..+++|++ +. +.++++++++
T Consensus 296 ~l~~~L~~---~~~~~~~p~~g~f~~~~l~--~~----~~~~~~~~~l~~~gi~v~~~~~~lRls--~~-~~~~~~~~l~ 363 (374)
T PRK02610 296 RLYQALQE---LPQLRVWPSAANFLYLRLS--QD----AALAALHQALKAQGTLVRHTGGGLRIT--IG-TPEENQRTLE 363 (374)
T ss_pred HHHHHHHh---CCCcEeCCCcceEEEEeCC--CC----CCHHHHHHHHHHCCEEEEeCCCeEEEe--CC-CHHHHHHHHH
Confidence 34444433 3444434556777666654 11 113467788899999999877899999 33 4567888888
Q ss_pred hhhccc
Q psy8199 640 AIFQTF 645 (965)
Q Consensus 640 ~l~~~~ 645 (965)
++.+.+
T Consensus 364 ~l~~~l 369 (374)
T PRK02610 364 RLQAAL 369 (374)
T ss_pred HHHHHH
Confidence 876544
No 188
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.83 E-value=4.2e-19 Score=200.05 Aligned_cols=317 Identities=14% Similarity=0.143 Sum_probs=203.9
Q ss_pred cCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEE-cCChhHHHHH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFY-GSDGASAVEV 329 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~-~~sGseA~~~ 329 (965)
.+++.++|+.++. +++| .+|.+.+++.+.+..... ++.....++.+.++++++...+++++ ++|.++++..
T Consensus 31 ~~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~-----y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~ 102 (361)
T PRK00950 31 IDPESIIKLGSNE--NPLG-PSPKAVEAIEKELSKIHR-----YPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDT 102 (361)
T ss_pred CCccceEEccCCC--CCCC-CCHHHHHHHHHHHHhhcC-----CCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHH
Confidence 4567899998763 4567 578999999887765322 23333477888888888766788988 6666788888
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
+++... .+++.|++.+++|..+.......+ ..+..+|.+... . .|++
T Consensus 103 ~~~~~~--------~~gd~vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~-~-----------~~~~ 149 (361)
T PRK00950 103 LMRTFI--------DPGDEVIIPTPTFSYYEISAKAHG-------------AKPVYAKREEDF-S-----------LDVD 149 (361)
T ss_pred HHHHhc--------CCCCEEEEcCCChHHHHHHHHHcC-------------CEEEEeecCCCC-C-----------cCHH
Confidence 877653 245789999998876532222111 122333322111 1 3678
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee--
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL-- 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv-- 487 (965)
++++.+.. ...+.+++.| +|++|.+.+ .+++.++|+++|+++|+||+|.+|. .+..... ..-.+.++
T Consensus 150 ~l~~~~~~--~~~~v~~~~p--~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~--~~~~~~vi~~ 218 (361)
T PRK00950 150 SVLNAITE--KTKVIFLCTP--NNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPL--ALEYDNLIIG 218 (361)
T ss_pred HHHHHhcc--CCCEEEEeCC--CCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHH--HHhcCCEEEE
Confidence 88877742 2223444455 899999887 6678889999999999999998774 1111111 11112232
Q ss_pred -eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 488 -CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 488 -t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
+|||.++ .| +++|++++++++++.+.. ...+++.++++++++.++|+ +.++.++.++..+..++.+
T Consensus 219 ~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l 286 (361)
T PRK00950 219 RTFSKVFGLAG-LRIGYGFVPEWLIDYYMR--------AKTPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYL 286 (361)
T ss_pred EeehHhhcCch-hhcchhcCCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 7899997 45 899999999999887765 22345577888888888874 3334444444444444444
Q ss_pred HcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEEEeCCcccCHHHHHHHH
Q psy8199 566 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMT 638 (965)
Q Consensus 566 ~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~~p~~~~t~~~i~~~~ 638 (965)
.+..+ +...+..|.++.+.+. . ....++.+.|.++||.++++ .+++|++. .+.+++++++
T Consensus 287 ~~~l~---~~~~~~~~~~i~~~~~-~------~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~---~~~~~~~~l~ 353 (361)
T PRK00950 287 YNELP---FKVYPSEANFVLVDVT-P------MTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSI---GTFEENERFL 353 (361)
T ss_pred HhhcC---eeECCCcceEEEEECC-C------CCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEEC---CCHHHHHHHH
Confidence 32211 2223445666666653 1 11446788888999999863 25899994 3778899999
Q ss_pred Hhhhcc
Q psy8199 639 SAIFQT 644 (965)
Q Consensus 639 ~~l~~~ 644 (965)
+++.+.
T Consensus 354 ~~L~~i 359 (361)
T PRK00950 354 EILKEI 359 (361)
T ss_pred HHHHHH
Confidence 887653
No 189
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.83 E-value=1.5e-18 Score=197.75 Aligned_cols=334 Identities=12% Similarity=0.051 Sum_probs=212.9
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcC---CCCC-eEEEcCChhHHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLG-HCFYGSDGASAV 327 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~~-~v~~~~sGseA~ 327 (965)
.|+.++|+..|.. .++ .++.+.+++.+.+.....|....+..+.+..+++.+.+.++ .+.+ +|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGEP--KHP-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCCC--CCC-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 4889999988754 344 36888999887766544454444556777888888877655 3444 899999999999
Q ss_pred HHHHHHHHHHHHhcCCCC---ceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 328 EVALKMSFHYWYNKGFLN---KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~---~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
..+++.... + ++.|++.+++|.++.......+ ..+..+|.....+..
T Consensus 104 ~~~~~~l~~--------~~~~gd~vlv~~P~y~~~~~~~~~~g-------------~~~~~vp~~~~~~~~--------- 153 (396)
T PRK09147 104 FAFAQTVID--------RDGPGPLVVCPNPFYQIYEGAALLAG-------------AEPYFLNCDPANNFA--------- 153 (396)
T ss_pred HHHHHHHcC--------CCCCCCEEEEcCCCccchHHHHHhcC-------------CEEEEeccCccccCc---------
Confidence 999887643 3 5789999999988743322222 123444432111100
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc--ccc-cc---
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFA-CE--- 478 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~~-~~--- 478 (965)
.|++++++.+.+ ...+.++++| +|++|.+. +++.+++|.++|++|++++|.||+|..|-..+. ... ..
T Consensus 154 -~d~~~l~~~~~~--~~k~i~l~nP--~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 227 (396)
T PRK09147 154 -PDFDAVPAEVWA--RTQLLFVCSP--GNPTGAVL-PLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAA 227 (396)
T ss_pred -cCHHHHHHHHhh--ccEEEEEcCC--CCCcCccC-CHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhcc
Confidence 367788776642 2234445555 99999876 788899999999999999999999987643331 111 11
Q ss_pred ccCC--Cccee---eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHH
Q psy8199 479 HAEI--WPDFL---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQ 552 (965)
Q Consensus 479 ~~~~--~pDiv---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~ 552 (965)
..+. .+.++ +|||.++..++++|++++++++++.+.. .....+++.+++++.++.+++..-. -....+
T Consensus 228 ~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~------~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~ 301 (396)
T PRK09147 228 ELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLL------YRTYHGCAMPPAVQAASIAAWNDEAHVRENRA 301 (396)
T ss_pred ccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHH------HhhhcccCCCHHHHHHHHHHhcchhHHHHHHH
Confidence 1111 13344 6899754433899999999999887764 1122345677888888887773100 011233
Q ss_pred HHHHHHHHHHHHHHcccCCCceeee-eceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------------
Q psy8199 553 RISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI------------- 617 (965)
Q Consensus 553 ~~~~~~~~l~~~L~~l~~~~~i~~v-~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------------- 617 (965)
.++++.+.+.+.|++. +... +..|+++++++. .+ ...+.+.++ ++||.+.|+
T Consensus 302 ~~~~~~~~~~~~L~~~-----~~~~~p~~g~f~~~~~~-~~-------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~ 368 (396)
T PRK09147 302 LYREKFDAVTPILAPV-----LDVQLPDAGFYLWAKVP-GD-------DTEFARRLYADYNVTVLPGSYLAREAHGVNPG 368 (396)
T ss_pred HHHHHHHHHHHHHHHh-----cCCCCCCeeEEEEEECC-CC-------HHHHHHHHHHhCCEEEeCCccccccccCCCCC
Confidence 4444445555555432 2222 344666666653 11 235666665 689998763
Q ss_pred CCEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 618 GNTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 618 ~~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
.+++|++ +..++++++++++++.+.+
T Consensus 369 ~~~iRi~--~~~~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 369 AGRVRIA--LVAPLAECVEAAERIVDFC 394 (396)
T ss_pred CCeEEEE--ecCCHHHHHHHHHHHHHHh
Confidence 2579999 5567888998888886543
No 190
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.83 E-value=1.4e-18 Score=198.72 Aligned_cols=342 Identities=13% Similarity=0.056 Sum_probs=209.7
Q ss_pred CcccccccccchhccCC-C-CCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcCC--CCCeEEEcCChhHH
Q psy8199 253 GKRYLDAISSWWVNLFG-H-SNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQY--KLGHCFYGSDGASA 326 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lG-h-~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA 326 (965)
|+.+|++..|... .++ . .+|++.+++.++++.. ..|....+..+.+..+++.+.+..+. ..++|++|+|+++|
T Consensus 51 ~~~~i~l~~G~P~-~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~a 129 (430)
T PLN00145 51 PRPVLPLGHGDPS-AFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQA 129 (430)
T ss_pred CCCeeeCCCCCCC-CCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHH
Confidence 8899998877432 222 2 3688999999888653 22333345556667777777654432 45789999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCC-CCCCCCCCCChhHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIAR 405 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 405 (965)
+..+++.... ++++|++.+++|+.+...+...+. .+..++.+ .....
T Consensus 130 l~l~~~~l~~--------~Gd~Vlv~~P~y~~y~~~~~~~g~-------------~~~~~~~~~~~~~~----------- 177 (430)
T PLN00145 130 IEIIMSVLAQ--------PGANILLPRPGYPLYEARAVFSGL-------------EVRHFDLLPERGWE----------- 177 (430)
T ss_pred HHHHHHHhcC--------CCCEEEEcCCCCccHHHHHHHcCC-------------EEEEeeCCcccCCc-----------
Confidence 9999887632 567899999999887433322221 22333321 11111
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccccCCCc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWP 484 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~~~p 484 (965)
.|++++++++.+ ...+++++.| +|++|.+. +.+.+++|.++|++||+++|+||+|..|...+.. .....++-..
T Consensus 178 ~d~~~l~~~~~~--~~~~i~i~~P--~NPtG~v~-~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 252 (430)
T PLN00145 178 VDLEGVEALADE--NTVAMVIINP--NNPCGSVY-SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVA 252 (430)
T ss_pred CCHHHHHHHhCc--CceEEEEeCC--CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccC
Confidence 367888887753 3456666666 89999766 7777999999999999999999999887543321 1111122222
Q ss_pred cee---eeccccCCCcccceeeee--cHHHHH------hhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc---ccH
Q psy8199 485 DFL---CLSKGITGGYLPLSLVMT--TDKIYN------SIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNI 550 (965)
Q Consensus 485 Div---t~sK~l~gG~~pig~v~~--~~~i~~------~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~---~~~ 550 (965)
.++ +|||.++..+|++|++++ ++.+++ .+.. + ...+...+.+.++++.++|+.-.+ +..
T Consensus 253 ~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~ 325 (430)
T PLN00145 253 PVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRN------Y-LNISTDPATFVQGAIPQIIANTKEEFFTKT 325 (430)
T ss_pred cEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHH------H-hcccCCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 344 589984432299999987 344433 2222 1 112223467888888888863111 123
Q ss_pred HHHHHHHHHHHHHHHHcccCCCceee-eeceeEEEEEE-EeecCccchhhHHHHHHH-HHHHcCcEEeecC-----CEEE
Q psy8199 551 LQRISQDMKKITKALTSLITHPKIIN-FRQKGMIWAFD-VIIEDPEQIETFSKKFFV-AALKNELLLRPIG-----NTVY 622 (965)
Q Consensus 551 ~~~~~~~~~~l~~~L~~l~~~~~i~~-v~g~G~~~~i~-~~~~~~~~~~~~~~~~~~-~l~~~Gi~~~~~~-----~~lR 622 (965)
.+.++++.+.+.+.|++ ++++.. ..+.|.|+.+. +. .+..........+.. .+.++||++.|+. +++|
T Consensus 326 ~~~~~~~~~~~~~~L~~---~~g~~~~~~P~ga~y~~v~l~-~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lR 401 (430)
T PLN00145 326 LGLLKETADICYEKIKE---IKCITCPHKPEGSMFVMVKLD-LSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLR 401 (430)
T ss_pred HHHHHHHHHHHHHHHhc---CCCCCCCcCCCeeeEEEeccC-hhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEE
Confidence 34445555555555543 456553 35666665443 32 100000001234554 4457799998852 7999
Q ss_pred EeCCcccCHHHHHHHHHhhhccc
Q psy8199 623 LMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 623 ~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
|+ +..+.+.+++.++++.+.+
T Consensus 402 is--~~~~~~~l~~al~rl~~~~ 422 (430)
T PLN00145 402 IT--FAIDPPSLEDGLERLKSFC 422 (430)
T ss_pred EE--eCCCHHHHHHHHHHHHHHH
Confidence 99 5568888888888876544
No 191
>PRK08960 hypothetical protein; Provisional
Probab=99.83 E-value=1.4e-18 Score=197.33 Aligned_cols=332 Identities=14% Similarity=0.049 Sum_probs=212.9
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEV 329 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~ 329 (965)
|..++++..|.. +++ .++.+.+++.+.+... ..+....+..+.+..+++.+.+..+ ...++|++|+|+++|+..
T Consensus 31 ~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGEP--DFT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 456788777644 233 3788999998887642 2232233455666777777765433 356799999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
++.+.. .+++.|++.+++|.++.......+ ..+..+|........ .|++
T Consensus 108 ~~~~~~--------~~gd~vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~----------~d~~ 156 (387)
T PRK08960 108 ASSLLV--------DPGKHWLLADPGYPCNRHFLRLVE-------------GAAQLVPVGPDSRYQ----------LTPA 156 (387)
T ss_pred HHHHhc--------CCCCEEEEcCCCCcchHHHHHhcC-------------CeEEEEecCcccCCC----------CCHH
Confidence 987663 256889999999988743322221 123344432211100 2577
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee--
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL-- 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv-- 487 (965)
++++++.+ ....++++.| +|++|.+. +.+.+++|.++|++||+++|+||+|.+|-..+... ....+.++++
T Consensus 157 ~l~~~~~~--~~~~i~i~~p--~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~vi~~ 229 (387)
T PRK08960 157 LVERHWNA--DTVGALVASP--ANPTGTLL-SRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDAFVL 229 (387)
T ss_pred HHHHHhCc--cceEEEEECC--CCCCCcCc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCEEEE
Confidence 88887753 3345566666 89999876 67789999999999999999999998774322211 1234456766
Q ss_pred -eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhccc----HHHHHHHHHHHH
Q psy8199 488 -CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN----ILQRISQDMKKI 561 (965)
Q Consensus 488 -t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~----~~~~~~~~~~~l 561 (965)
+|||.++ .| +++|++++++++++.+.. +....+.+.+.+++.++.++|+- ..++ ..+.++++.+.+
T Consensus 230 ~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~------~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l 301 (387)
T PRK08960 230 NSFSKYFGMTG-WRLGWLVAPPAAVPELEK------LAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFL 301 (387)
T ss_pred eecccccCCcc-cEEEEEEcCHHHHHHHHH------HHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHH
Confidence 4899886 45 899999999999887754 22334556688898888888742 1112 233444455555
Q ss_pred HHHHHcccCCCcee-eeece-eEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec--------CCEEEEeCCcccC
Q psy8199 562 TKALTSLITHPKII-NFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI--------GNTVYLMPPYILN 630 (965)
Q Consensus 562 ~~~L~~l~~~~~i~-~v~g~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~--------~~~lR~~p~~~~t 630 (965)
.+.|++. ++. .+.+. |+++.+++. .... ....+++.+. ++||.+.|+ ++++|++.. .+
T Consensus 302 ~~~L~~~----~~~~~~~p~g~~f~~~~~~-~~~~----~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~--~~ 370 (387)
T PRK08960 302 LPALREL----GFGIAVEPQGAFYLYADIS-AFGG----DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT--QS 370 (387)
T ss_pred HHHHHhc----CCcCCcCCCeeEEEEEecc-ccCC----CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec--CC
Confidence 5555543 222 12343 556666653 1000 1245666655 689999873 258999944 46
Q ss_pred HHHHHHHHHhhhcc
Q psy8199 631 KNEIQHMTSAIFQT 644 (965)
Q Consensus 631 ~~~i~~~~~~l~~~ 644 (965)
.+.+.++++++.+.
T Consensus 371 ~~~l~~al~~l~~~ 384 (387)
T PRK08960 371 LPRLQEAVERIARG 384 (387)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777776543
No 192
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=7.4e-19 Score=197.36 Aligned_cols=314 Identities=12% Similarity=0.132 Sum_probs=203.7
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al 331 (965)
+|..++|+..| .+++| .+|.+.+++.+.++.... |+.....+|.+.+++.++.+.+++++|+|+++|+..++
T Consensus 28 ~~~~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~-----Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~ 99 (357)
T PRK14809 28 DPDDLVKLSSN--ENPHG-PSPAAVEAIREAAERVHS-----YPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLA 99 (357)
T ss_pred CccceeEecCC--CCCCC-CCHHHHHHHHHHHhhhhc-----CCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHH
Confidence 46678998776 34455 578899999887765322 23333557778888888778889999999999999998
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
++..+ +++.|++.+++|..+.......+ ..+..+|.+...+.. .+++++
T Consensus 100 ~~~~~--------~gd~V~v~~P~y~~~~~~~~~~g-------------~~~~~~~l~~~~~~~----------~~~~~~ 148 (357)
T PRK14809 100 RAMLD--------PGDTVLVPDPGFAYYGMSARYHH-------------GEVREYPVSKADDFE----------QTADTV 148 (357)
T ss_pred HHhcC--------CCCEEEEeCCChHHHHHHHHHcC-------------CeEEEEecccCcCCC----------cCHHHH
Confidence 87643 56789999999865532211111 123333332111000 234555
Q ss_pred HHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---e
Q psy8199 412 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---C 488 (965)
Q Consensus 412 e~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t 488 (965)
++.+. .....++++ ++|++|.+. +.+.+++|.++|++ ++++|+||+|..|...+... ......++++ +
T Consensus 149 ~~~~~---~~k~i~l~~--p~NPTG~~~-s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~--~~~~~~~~vi~~~S 219 (357)
T PRK14809 149 LDAYD---GERIVYLTS--PHNPTGSEI-PLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAV--ALVEERDDVAVLRT 219 (357)
T ss_pred HHhhc---CCcEEEEeC--CCCCCCcCC-CHHHHHHHHHhCcc-CcEEEEechhhhccCCchhH--HHHhhCCCEEEEec
Confidence 54432 223444554 499999887 56667888888865 78999999999875433211 1111122333 7
Q ss_pred eccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHH----HHHHHHHHHH
Q psy8199 489 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQR----ISQDMKKITK 563 (965)
Q Consensus 489 ~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~----~~~~~~~l~~ 563 (965)
|||.++ .| +++|++++++++++.+.. ...+++.+++++.++.++|+ ++++.++ ++++.+.+.+
T Consensus 220 fSK~~~~~G-lRiG~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~ 287 (357)
T PRK14809 220 FSKAYGLAG-LRLGYAVVPEEWADAYAR--------VNTPFAASELACRAGLAALD---DDEHVERTVETARWAREYIRE 287 (357)
T ss_pred chhHhcCcc-hhheeeecCHHHHHHHHH--------hCCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHH
Confidence 899886 45 899999999999988865 12466778999998888884 2333333 3333344444
Q ss_pred HHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-----CEEEEeCCcccCHHHHHHHH
Q psy8199 564 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-----NTVYLMPPYILNKNEIQHMT 638 (965)
Q Consensus 564 ~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~lR~~p~~~~t~~~i~~~~ 638 (965)
.|.. . ..++.|+++.+.+. + ..++.+.|.++||.+.|+. +++|++. .+.+++++++
T Consensus 288 ~L~~---~----~~~~~g~f~~~~~~--~-------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~---~~~~~~~~~l 348 (357)
T PRK14809 288 ELDA---P----TWESAGNFVLAEVG--D-------ASAVAEAAQERGVIVRDCTSFGLPECIRITC---GTREETERAV 348 (357)
T ss_pred HhcC---c----cCCCCCCEEEEECC--C-------HHHHHHHHHHCCEEEEECccCCCCCeEEEec---CCHHHHHHHH
Confidence 4422 1 22456788877653 2 3357778889999999853 6899993 3578999999
Q ss_pred Hhhhcc
Q psy8199 639 SAIFQT 644 (965)
Q Consensus 639 ~~l~~~ 644 (965)
+++...
T Consensus 349 ~~L~~~ 354 (357)
T PRK14809 349 EVLNEV 354 (357)
T ss_pred HHHHHH
Confidence 888654
No 193
>PRK09148 aminotransferase; Validated
Probab=99.83 E-value=1.6e-18 Score=197.44 Aligned_cols=346 Identities=12% Similarity=0.041 Sum_probs=218.7
Q ss_pred cCCcccccccccchhccCCCCCHHHHHHHHHHHhh--ccccccCCCCcHHHHHHHHHHHhhcC--CCCC-eEEEcCChhH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNK--LEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGAS 325 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~--~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~-~v~~~~sGse 325 (965)
..|+.++|+..|. ..++. ++.+.+++.+.+.. ...|....+..+.+..+++.+.+..+ ...+ +|++|+|+++
T Consensus 27 ~~~~~~i~l~~~~--p~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~ 103 (405)
T PRK09148 27 AAGADIIDLGMGN--PDLPT-PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE 103 (405)
T ss_pred hcCCCeEEcCCCC--CCCCC-CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence 3577889987763 23443 67888888877643 22233334455677778877776544 2455 7999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|+..++..... +++.|++.+++|.++.......+. .+..+|.....
T Consensus 104 al~~~~~~l~~--------~gd~Vl~~~P~y~~~~~~~~~~g~-------------~v~~v~~~~~~------------- 149 (405)
T PRK09148 104 GFANMAQAITA--------PGDVILCPNPSYPIHAFGFIMAGG-------------VIRSVPAEPDE------------- 149 (405)
T ss_pred HHHHHHHHhcC--------CCCEEEEcCCCCcccHHHHHhcCC-------------EEEEEeCCCCC-------------
Confidence 99999887643 568899999999887433222211 22333321110
Q ss_pred HHHHHHHHHHHhCCCcEE-EEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccc-ccccCCC
Q psy8199 406 CAIFDLEILLKKNHNKIA-AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIW 483 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~a-aii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~~~ 483 (965)
.+++++++++..+..++. .+++.| +|++|.+. +.+.+++|.++|++||+++|+||+|..|...+..+. .....-.
T Consensus 150 ~~~~~l~~~~~~~~~~~~~v~l~~P--~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~ 226 (405)
T PRK09148 150 EFFPALERAVRHSIPKPIALIVNYP--SNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGA 226 (405)
T ss_pred CCccCHHHHHhhccccceEEEEeCC--CCCCCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCc
Confidence 123445555543323444 455555 89999776 778899999999999999999999987643332211 1111111
Q ss_pred cc----eeeeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHH
Q psy8199 484 PD----FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQ 556 (965)
Q Consensus 484 pD----ivt~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~ 556 (965)
++ +-+|||.++ -| +++|++++++++++.+.. .....+++.+++++.++.+.|+.-.+ +...+.+++
T Consensus 227 ~~~~i~~~SfSK~~~~pG-lR~G~~v~~~~~i~~l~~------~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~ 299 (405)
T PRK09148 227 KDVTVEFTSMSKTFSMAG-WRMGFAVGNERLIAALTR------VKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKK 299 (405)
T ss_pred cCcEEEEeccccccCCcc-hheeeeeCCHHHHHHHHH------HHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 23 236899887 45 899999999999988865 22223456678888888888852111 123445556
Q ss_pred HHHHHHHHHHcccCCCceeeeec-eeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCc
Q psy8199 557 DMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPY 627 (965)
Q Consensus 557 ~~~~l~~~L~~l~~~~~i~~v~g-~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~ 627 (965)
+.+.+.+.|++. ++....+ .|+++++.+. .. .. .....++.+.+. ++||.+.|+ .+++|++.
T Consensus 300 ~r~~l~~~L~~~----~~~~~~p~~g~f~~~~l~-~~-~~-~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~-- 370 (405)
T PRK09148 300 RRDVLVESFGRA----GWDIPPPAASMFAWAPIP-EA-FR-HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL-- 370 (405)
T ss_pred HHHHHHHHHHHc----CCccCCCCeeEEEEEECC-Cc-cC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--
Confidence 666666666543 3333334 4556666653 11 00 001235666655 789999874 26899984
Q ss_pred ccCHHHHHHHHHhhhcccccHHHHH
Q psy8199 628 ILNKNEIQHMTSAIFQTFNELDEVI 652 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~~~~~~~e~l 652 (965)
..+.+.+.++++++.+.+...+|.+
T Consensus 371 ~~~~~~l~~al~~l~~~l~~~~~~~ 395 (405)
T PRK09148 371 VENEQRIRQAARNIKRFLSSADETL 395 (405)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678889999998887776666644
No 194
>PRK12414 putative aminotransferase; Provisional
Probab=99.83 E-value=1.6e-18 Score=196.23 Aligned_cols=333 Identities=10% Similarity=0.069 Sum_probs=216.5
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcCCC--C-CeEEEcCChhHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQYK--L-GHCFYGSDGASAVE 328 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~--~-~~v~~~~sGseA~~ 328 (965)
+..++|+..|.. .++ .+|.+.+++.+.+... ..|....+..+....+++.+++..+.. . +++++++||++|+.
T Consensus 28 ~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~ 104 (384)
T PRK12414 28 QHDALNLSQGAP--NFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLY 104 (384)
T ss_pred hCCeEEcCCCCC--CCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHH
Confidence 346788887754 344 4788999988776542 233334455677888888888877643 2 47999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.+++.... ++++|++.+++|.++.......+. ....+|....... .|+
T Consensus 105 ~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----------~d~ 152 (384)
T PRK12414 105 AAISALVH--------PGDEVIYFEPSFDSYAPIVRLQGA-------------TPVAIKLSPEDFR-----------VNW 152 (384)
T ss_pred HHHHHhcC--------CCCEEEEeCCCccchHHHHHHcCC-------------EEEEEecCccccc-----------cCH
Confidence 99886642 568899999999776333222211 2223332110011 367
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-cc-cccCCCcce
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-AC-EHAEIWPDF 486 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~-~~~~~~pDi 486 (965)
++|++++. .++.+|++.. ++|++|.+. +++.+++|.++|++||+++|+||+|..|...+... .. .+.+....+
T Consensus 153 ~~l~~~l~---~~~~~v~i~~-p~NPTG~~~-s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 227 (384)
T PRK12414 153 DEVAAAIT---PRTRMIIVNT-PHNPSATVF-SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERS 227 (384)
T ss_pred HHHHhhcC---cccEEEEEcC-CCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcE
Confidence 88888774 2345555554 599999876 67789999999999999999999998764334211 11 111222233
Q ss_pred e---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHH
Q psy8199 487 L---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKI 561 (965)
Q Consensus 487 v---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l 561 (965)
+ +|||.++ .| +++|++++++++++.+.. .....+++.+.+++.++.+.|+.-. .....+.++++.+.+
T Consensus 228 i~~~SfSK~~~~pG-lRiG~~v~~~~l~~~l~~------~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l 300 (384)
T PRK12414 228 VIVSSFGKSYHVTG-WRVGYCLAPAELMDEIRK------VHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLL 300 (384)
T ss_pred EEEecccccccCcc-ceEEEEecCHHHHHHHHH------HHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 3 6899886 45 899999999999887765 2233466778889988888774211 012345566666667
Q ss_pred HHHHHcccCCCceeeeeceeEEEEE-EEeecCccchhhHHHHHH-HHHHHcCcEEeec---------CCEEEEeCCcccC
Q psy8199 562 TKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIETFSKKFF-VAALKNELLLRPI---------GNTVYLMPPYILN 630 (965)
Q Consensus 562 ~~~L~~l~~~~~i~~v~g~G~~~~i-~~~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~---------~~~lR~~p~~~~t 630 (965)
.+.|++. ++...++.|.|+.+ .+. ... ... ...+. +.+.++||.+.|+ .+++|++ +..+
T Consensus 301 ~~~L~~~----g~~~~~~~gg~~~~~~~~-~~~--~~~-~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis--~~~~ 370 (384)
T PRK12414 301 ARELAGS----RFELLPSEGSFFMLARFR-HFS--DES-DSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLS--FSKD 370 (384)
T ss_pred HHHHHhC----CCeecCCCcceEEEEccc-ccC--CCC-HHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEE--ecCC
Confidence 6766653 34445566766555 443 100 001 22343 5667899999873 2579999 5567
Q ss_pred HHHHHHHHHhhh
Q psy8199 631 KNEIQHMTSAIF 642 (965)
Q Consensus 631 ~~~i~~~~~~l~ 642 (965)
++++++.++++.
T Consensus 371 ~~~~~~~~~rl~ 382 (384)
T PRK12414 371 DATLVEGARRLC 382 (384)
T ss_pred HHHHHHHHHHHh
Confidence 888998888775
No 195
>PRK08068 transaminase; Reviewed
Probab=99.83 E-value=1.7e-18 Score=196.78 Aligned_cols=334 Identities=10% Similarity=-0.003 Sum_probs=210.1
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC--CCCC-eEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~-~v~~~~sGseA 326 (965)
.|..++|+..+. +-...+|.+.+++.+.+... ..|....+..+.+..+++.+.+..+ ...+ ++++|+||+++
T Consensus 30 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~ 106 (389)
T PRK08068 30 EGHDVINLGQGN---PDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAG 106 (389)
T ss_pred cCCCeEEecCCC---CCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 355678887773 33446788999998887642 2233234455666777777765444 3456 79999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..++..... +++.|++.+++|.++...+...+. .+..+|.....+.. .
T Consensus 107 l~~~~~~~~~--------~gd~vlv~~P~y~~~~~~~~~~g~-------------~~~~i~~~~~~~~~----------~ 155 (389)
T PRK08068 107 LVELPQCLMN--------PGDTILVPDPGYPDYLSGVALARA-------------QFETMPLIAENNFL----------P 155 (389)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCcchHHHHHhcCC-------------EEEEeecccccCCC----------C
Confidence 9988776532 567899999999877433332221 22333332110100 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-c-ccccccCCCc
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-F-FACEHAEIWP 484 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~-~~~~~~~~~p 484 (965)
|++++++.+.+ ...+.++++| +|++|.+. +.+.+++|.++|++||+++|+||+|..|...+. . ......+..+
T Consensus 156 d~~~l~~~~~~--~~~~v~l~~P--~NPTG~~~-s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~ 230 (389)
T PRK08068 156 DYTKIPEEVAE--KAKLMYLNYP--NNPTGAVA-TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKD 230 (389)
T ss_pred CHHHHHHhccc--cceEEEEECC--CCCCCCcC-CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccC
Confidence 56777777642 2234445556 89999866 777799999999999999999999987754442 1 1122223222
Q ss_pred ce---eeeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--cccHHHHHHHHH
Q psy8199 485 DF---LCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDM 558 (965)
Q Consensus 485 Di---vt~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~~~~~~~~~~~~ 558 (965)
.+ -+|||.++ .| +++|++++++++++.+.. .......+..++.+.++.++|..-. -+...+.++++.
T Consensus 231 ~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~l~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r 303 (389)
T PRK08068 231 VGIELYTLSKTFNMAG-WRVAFAVGNESVIEAINL------LQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRR 303 (389)
T ss_pred CEEEEecchhccCCcc-ceeEeEecCHHHHHHHHH------HHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 32 27899886 45 899999999999988865 1111223344556666666663211 023455566666
Q ss_pred HHHHHHHHcccCCCceeeeeceeEE-EEEEEeecCccchhhHHHHHHHHHHH-cCcEEeec-------CCEEEEeCCccc
Q psy8199 559 KKITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-------GNTVYLMPPYIL 629 (965)
Q Consensus 559 ~~l~~~L~~l~~~~~i~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-------~~~lR~~p~~~~ 629 (965)
+.+.+.|+++ ++...++.|.+ +.+.+. +. .....+.+.|++ +||.+.|+ .+++||+ +..
T Consensus 304 ~~~~~~L~~~----g~~~~~~~g~~~~~v~~~--~~----~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~--~~~ 371 (389)
T PRK08068 304 NAFISACREI----GWEVDAPKGSFFAWMPVP--KG----YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVG--LLT 371 (389)
T ss_pred HHHHHHHHHC----CCcccCCCeeEEEEEECC--CC----CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEE--EcC
Confidence 6676766554 34444566665 456553 11 113467788875 69999873 2589999 455
Q ss_pred CHHHHHHHHHhhhc
Q psy8199 630 NKNEIQHMTSAIFQ 643 (965)
Q Consensus 630 t~~~i~~~~~~l~~ 643 (965)
.++.+.+.++++.+
T Consensus 372 ~~~~l~~al~~l~~ 385 (389)
T PRK08068 372 DEERLREAVERIGK 385 (389)
T ss_pred CHHHHHHHHHHHHH
Confidence 67777777776653
No 196
>PRK14331 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.83 E-value=2e-19 Score=204.88 Aligned_cols=192 Identities=15% Similarity=0.205 Sum_probs=157.1
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccH--HHHHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDL--DNIENMICEV 759 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~--~~~~~~~~~i 759 (965)
...+.+ ++|||++|.||..+...+ +++.+++++|+++++.+.+.|+++|.|++........+. ..+.++++.+
T Consensus 147 ~a~v~i-~rGC~~~CsFC~~p~~~g----~~rsr~~e~V~~Ei~~l~~~g~~eI~l~d~~~~~y~~~~~~~~~~~Ll~~l 221 (437)
T PRK14331 147 CAYVTV-MRGCDKKCTYCVVPKTRG----KERSRRLGSILDEVQWLVDDGVKEIHLIGQNVTAYGKDIGDVPFSELLYAV 221 (437)
T ss_pred EEEEEe-ccCcCCCCccCCcccCCC----CcccCCHHHHHHHHHHHHHCCCeEEEEeeeccccccCCCCCCCHHHHHHHH
Confidence 356677 899999999999875322 346679999999999999999999999876543211111 2466666666
Q ss_pred Hhc-C---cEeEE-ecCCCCHHHHHHHHHh--CCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceeee
Q psy8199 760 KKI-G---LETCL-TLGMLNENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICCG 829 (965)
Q Consensus 760 ~~~-~---~~i~~-~~~~~~~e~l~~Lk~a--G~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~ 829 (965)
.+. + +.++. ++..++++.++.|+++ |+.++++++|| ++++++.|+++++.+++.++++.++++ |+.+.++
T Consensus 222 ~~~~g~~~i~~~~~~p~~l~~ell~~~~~~~~~~~~l~igiqSgsd~vLk~m~R~~t~~~~~~~v~~lr~~~~gi~i~~d 301 (437)
T PRK14331 222 AEIDGVERIRFTTGHPRDLDEDIIKAMADIPQVCEHLHLPFQAGSDRILKLMDRGYTKEEYLEKIELLKEYIPDITFSTD 301 (437)
T ss_pred hcCCCccEEEEeccCcccCCHHHHHHHHcCCccCCceecccccCChHHHHHcCCCCCHHHHHHHHHHHHHhCCCCEEecC
Confidence 542 3 23322 4556899999999998 59999999999 999999999999999999999999998 9999999
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHH
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPL 880 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~ 880 (965)
+|+|+ |||.+|+.++++++.+++ ++.+.++.|.|.||||+++.+ ..+.+
T Consensus 302 ~IvG~PgET~ed~~~tl~~l~~l~--~~~i~~f~~sp~pGT~~~~~~~~~~~~ 352 (437)
T PRK14331 302 IIVGFPTETEEDFEETLDVLKKVE--FEQVFSFKYSPRPGTPAAYMEGQEPDE 352 (437)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcC--cceeeeeEecCCCCcchhhCCCCCCHH
Confidence 99999 799999999999999999 899999999999999998865 34443
No 197
>TIGR00089 RNA modification enzyme, MiaB family. This subfamily is aparrently a part of a larger superfamily of enzymes utilizing both a 4Fe4S cluster and S-adenosyl methionine (SAM) to initiate radical reactions. MiaB acts on a particular isoprenylated Adenine base of certain tRNAs causing thiolation at an aromatic carbon, and probably also transferring a methyl grouyp from SAM to the thiol. The particular substrate of the three other clades is unknown but may be very closely related.
Probab=99.83 E-value=1.7e-19 Score=205.98 Aligned_cols=195 Identities=14% Similarity=0.185 Sum_probs=160.5
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcc---cHHHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDR---DLDNIENMICEV 759 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~---~~~~~~~~~~~i 759 (965)
..+.+ ++|||++|.||..+...+ +++.+++++|+++++.+.+.|+++|.|++........ ....+.++++.+
T Consensus 141 ~~i~~-srGC~~~CsfC~~~~~~g----~~r~r~~e~Vv~Ei~~l~~~g~~ei~l~~~~~~~yg~d~~~~~~l~~Ll~~l 215 (429)
T TIGR00089 141 AFLKI-QEGCDKFCTYCIVPYARG----RERSRPPEDILEEVKELVSKGVKEIVLLGQNVGAYGKDLKGETNLADLLREL 215 (429)
T ss_pred EEEEH-HhCcCCCCCcCceecccC----CCCCCCHHHHHHHHHHHHHCCCceEEEEeeccccccCCCCCCcCHHHHHHHH
Confidence 45666 999999999999775433 4667899999999999999999999998864321101 113577788777
Q ss_pred Hhc-Cc-EeEE---ecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcC--Cceeee
Q psy8199 760 KKI-GL-ETCL---TLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVG--INICCG 829 (965)
Q Consensus 760 ~~~-~~-~i~~---~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~G--i~v~~~ 829 (965)
++. ++ .+.+ ++..++++.++.|+++| +.++++++|| ++++++.|+++++.+++.++++.++++| +.+.++
T Consensus 216 ~~~~g~~~i~~~~~~p~~i~~ell~~m~~~~~~~~~l~igiES~s~~vLk~m~R~~~~~~~~~~i~~lr~~~~~i~i~~~ 295 (429)
T TIGR00089 216 SKIDGIERIRFGSSHPDDVTDDLIELIAENPKVCKHLHLPVQSGSDRILKRMNRKYTREEYLDIVEKIRAKIPDAAITTD 295 (429)
T ss_pred hcCCCCCEEEECCCChhhcCHHHHHHHHhCCCccCceeeccccCChHHHHhCCCCCCHHHHHHHHHHHHHHCCCCEEEee
Confidence 764 33 2332 45567999999999995 9999999999 9999999999999999999999999998 889999
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHHHHHH
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPLEFIR 884 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~~~~~ 884 (965)
+|+|+ |||.+++.++++++.+++ ++.+.++.|.|.||||++..+ ..+.+...+
T Consensus 296 ~IvG~PgET~ed~~~tl~~i~~~~--~~~~~~~~~sp~pgT~~~~~~~~v~~~~~~~ 350 (429)
T TIGR00089 296 IIVGFPGETEEDFEETLDLVEEVK--FDKLHSFIYSPRPGTPAADMKDQVPEEVKKE 350 (429)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcC--CCEeeccccCCCCCCchhhCCCCCCHHHHHH
Confidence 99999 799999999999999999 999999999999999999765 455544333
No 198
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=1.8e-18 Score=193.40 Aligned_cols=319 Identities=16% Similarity=0.212 Sum_probs=209.6
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 333 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~ 333 (965)
..++|+..+ .+++|. +|.+.+++.+.+..... |+.....+|.+.++++++.+.+++++++|+++++..+++.
T Consensus 19 ~~~~~l~~~--~~~~~~-p~~~~~a~~~~~~~~~~-----Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~ 90 (354)
T PRK06358 19 NMILDFSAN--INPLGV-PESLKQAITENLDKLVE-----YPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKV 90 (354)
T ss_pred cceEEecCC--CCCCCC-CHHHHHHHHHHHHhhhc-----CCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH
Confidence 346888665 345664 78999999987765433 3333346777888888777888999999999999988875
Q ss_pred HHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy8199 334 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 413 (965)
Q Consensus 334 a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 413 (965)
. .+ +.|++.+++|+.+.......+ ..+..+|........ .| +++.+
T Consensus 91 ~---------~~-~~v~i~~P~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~----------~d-~~~~~ 136 (354)
T PRK06358 91 T---------KP-KKVLILAPTFAEYERALKAFD-------------AEIEYAELTEETNFA----------AN-EIVLE 136 (354)
T ss_pred h---------CC-CcEEEecCChHHHHHHHHHcC-------------CeeEEEeCccccCCC----------cc-HHHHH
Confidence 4 12 579999999988743332221 123333331110000 13 33333
Q ss_pred HHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccccCCCccee---ee
Q psy8199 414 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWPDFL---CL 489 (965)
Q Consensus 414 ~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~~~pDiv---t~ 489 (965)
.+.. ....+++++| +|++|.+. +.+.+++|.++|++||+++|+||+|..|-..+.. .........++++ +|
T Consensus 137 ~~~~--~~~~v~~~~P--~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 211 (354)
T PRK06358 137 EIKE--EIDLVFLCNP--NNPTGQLI-SKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAF 211 (354)
T ss_pred hhcc--CCCEEEEeCC--CCCCCCcc-CHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEec
Confidence 3432 2233456677 89999876 7788999999999999999999999887544321 1122222234554 68
Q ss_pred ccccC-CCcccceeeeec-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHH
Q psy8199 490 SKGIT-GGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALT 566 (965)
Q Consensus 490 sK~l~-gG~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~~~~~~~l~~~L~ 566 (965)
||.++ .| +++|+++++ +.+++.+.. . ...++.+.+++.++.++|+--.- ....+.++++.+++.+.|+
T Consensus 212 SK~~gl~G-~RiG~lv~~~~~~~~~~~~------~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 282 (354)
T PRK06358 212 TKFFAIPG-LRLGYGLTSNKNLAEKLLQ------M--REPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLS 282 (354)
T ss_pred hhhccCcc-hhheeeecCCHHHHHHHHH------h--CCCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99887 55 899999884 677777765 1 12466788888888888842110 2234455556666666665
Q ss_pred cccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-------CEEEEeCCcccCHHHHHHHHH
Q psy8199 567 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-------NTVYLMPPYILNKNEIQHMTS 639 (965)
Q Consensus 567 ~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~lR~~p~~~~t~~~i~~~~~ 639 (965)
++ +++....+.|.++.+.+. + ...+.+.|.++||.++++. +++|++ ..+.++.+++++
T Consensus 283 ~~---~~~~~~~~~g~f~~~~~~--~-------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~~~~~~~l~~ 347 (354)
T PRK06358 283 EF---KGIKVYKPSVNFIFFKLE--K-------PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKSREDNKKLLK 347 (354)
T ss_pred cC---CCcEEcCCcceEEEEEcC--c-------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHH
Confidence 43 455555677887777653 2 1467788889999998741 579999 677788888888
Q ss_pred hhhc
Q psy8199 640 AIFQ 643 (965)
Q Consensus 640 ~l~~ 643 (965)
++..
T Consensus 348 ~l~~ 351 (354)
T PRK06358 348 ALEV 351 (354)
T ss_pred HHHH
Confidence 8764
No 199
>PRK14327 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.83 E-value=2.4e-19 Score=204.10 Aligned_cols=192 Identities=14% Similarity=0.202 Sum_probs=158.0
Q ss_pred EeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCccc----HHHHHHHH
Q psy8199 681 LAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRD----LDNIENMI 756 (965)
Q Consensus 681 ~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~----~~~~~~~~ 756 (965)
..+.+++ ++|||++|.||..+...+ +++.+++|+|+++++.+.+.|+++|.|.+........+ ...+.+++
T Consensus 212 ~~a~v~I-~~GC~~~CsFC~vp~~rG----~~Rsr~~e~Ii~Ei~~l~~~G~keI~L~g~n~~~yg~d~~~~~~~l~~Ll 286 (509)
T PRK14327 212 IKAWVNI-MYGCDKFCTYCIVPYTRG----KERSRRPEDIIQEVRHLARQGYKEITLLGQNVNAYGKDFEDIEYGLGDLM 286 (509)
T ss_pred eEEEEEe-cCCCCCCCcCCcccccCC----CCeeCCHHHHHHHHHHHHHCCCcEEEEEeeccccCcccccccchHHHHHH
Confidence 3577788 999999999999765322 34568999999999999999999999988654321111 12366777
Q ss_pred HHHHhcCc---EeE-EecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCcee
Q psy8199 757 CEVKKIGL---ETC-LTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINIC 827 (965)
Q Consensus 757 ~~i~~~~~---~i~-~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~ 827 (965)
+.+.+.++ .+. .++..++++.++.|+++| +.++++++|| |+++++.|++.++.++++++++.++++ ++.++
T Consensus 287 ~~I~~~~i~~ir~~s~~P~~i~deli~~m~~~g~~~~~l~lgvQSgsd~vLk~M~R~~t~e~~~~~v~~lr~~~p~i~i~ 366 (509)
T PRK14327 287 DEIRKIDIPRVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQSGSTEVLKIMARKYTRESYLELVRKIKEAIPNVALT 366 (509)
T ss_pred HHHHhCCCceEEEeecCcccCCHHHHHHHHhcCCccceEEeccCCCCHHHHHhcCCCCCHHHHHHHHHHHHHhCCCcEEe
Confidence 77765433 333 356678999999999999 7899999999 999999999999999999999999998 67888
Q ss_pred eeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCH
Q psy8199 828 CGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDP 879 (965)
Q Consensus 828 ~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~ 879 (965)
+.+|+|+ |||.+|+.++++++++++ ++.+.++.|.|.||||++..+ +.+.
T Consensus 367 tdiIvGfPgET~edf~~Tl~~v~~l~--~d~~~~f~ysprpGT~a~~~~~~vp~ 418 (509)
T PRK14327 367 TDIIVGFPNETDEQFEETLSLYREVG--FDHAYTFIYSPREGTPAAKMKDNVPM 418 (509)
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHHcC--CCeEEEeeeeCCCCCchHhCcCCCCH
Confidence 8999999 799999999999999999 899999999999999998654 3444
No 200
>PRK14332 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.83 E-value=3.6e-19 Score=201.82 Aligned_cols=192 Identities=11% Similarity=0.167 Sum_probs=158.2
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHh
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK 761 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~ 761 (965)
.+.+.+ ++|||++|+||..+...+ +++.+++|+|+++++.+.+.|++++.|.+........+...+.++++.+.+
T Consensus 155 ~a~l~i-srGC~~~CsFC~ip~~rG----~~rsr~~e~Iv~Ei~~l~~~G~kei~l~~~~~~~y~~~~~~l~~Ll~~l~~ 229 (449)
T PRK14332 155 QAFVTI-MRGCNNFCTFCVVPYTRG----RERSRDPKSIVREIQDLQEKGIRQVTLLGQNVNSYKEQSTDFAGLIQMLLD 229 (449)
T ss_pred eEEEEe-cCCcCCCCCCCCcccccC----CcccCCHHHHHHHHHHHHHCCCeEEEEecccCCcccCCcccHHHHHHHHhc
Confidence 456677 999999999998775322 346689999999999999999999999887654332233457777777654
Q ss_pred c-C---cEeE-EecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceeeeEE
Q psy8199 762 I-G---LETC-LTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICCGGI 831 (965)
Q Consensus 762 ~-~---~~i~-~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~~i 831 (965)
. + +.+. .++..++++.++.|+++| +.++++++|| ++++++.|+++++.+++.++++.++++ ++.+.+++|
T Consensus 230 ~~~~~~ir~~~~~p~~~~~ell~~m~~~~~~~~~l~lgvQSgsd~vLk~m~R~~t~~~~~~~i~~lr~~~p~i~i~td~I 309 (449)
T PRK14332 230 ETTIERIRFTSPHPKDFPDHLLSLMAKNPRFCPNIHLPLQAGNTRVLEEMKRSYSKEEFLDVVKEIRNIVPDVGITTDII 309 (449)
T ss_pred CCCcceEEEECCCcccCCHHHHHHHHhCCCccceEEECCCcCCHHHHHhhCCCCCHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 2 2 2222 245667999999999998 8999999999 999999999999999999999999997 678889999
Q ss_pred Eec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCC-CC-CCCCHH
Q psy8199 832 IGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLY-GS-SILDPL 880 (965)
Q Consensus 832 ~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~-~~-~~~~~~ 880 (965)
+|+ |||.+|+.++++++++++ ++.+.++.|.|.||||.+ .. .+++.+
T Consensus 310 vGfPgET~edf~~tl~~v~~l~--~~~~~~f~ys~~~GT~a~~~~~~~v~~~ 359 (449)
T PRK14332 310 VGFPNETEEEFEDTLAVVREVQ--FDMAFMFKYSEREGTMAKRKLPDNVPEE 359 (449)
T ss_pred eeCCCCCHHHHHHHHHHHHhCC--CCEEEEEEecCCCCChhHHhCcCCCCHH
Confidence 999 799999999999999999 999999999999999997 33 334543
No 201
>TIGR01125 MiaB-like tRNA modifying enzyme YliG, TIGR01125. This clade spans alpha and gamma proteobacteria, cyano bacteria, deinococcus, porphyromonas, aquifex, helicobacter, campylobacter, thermotoga, chlamydia, streptococcus coelicolor and clostridium, but does not include most other gram positive bacteria, archaea or eukaryotes.
Probab=99.83 E-value=3.9e-19 Score=202.52 Aligned_cols=194 Identities=15% Similarity=0.202 Sum_probs=158.2
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCc---ccHHHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKD---RDLDNIENMICEV 759 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~---~~~~~~~~~~~~i 759 (965)
..|.+ |+|||++|.||..+...+ +++.+++++|+++++.+.+.|+++|.|++....... ...+++.++++.+
T Consensus 137 ~~i~~-srGC~~~CsfC~~~~~~G----~~r~r~~e~Vv~Ei~~l~~~g~k~i~~~~~d~~~~g~d~~~~~~l~~Ll~~i 211 (430)
T TIGR01125 137 AYLKV-AEGCNRRCAFCIIPSIRG----KLRSRPIEEILKEAERLVDQGVKEIILIAQDTTAYGKDLYRESKLVDLLEEL 211 (430)
T ss_pred EEEEE-ccCCCCCCCcCCeecccC----CceecCHHHHHHHHHHHHHCCCcEEEEEeECCCccccCCCCcccHHHHHHHH
Confidence 45777 999999999998775432 356689999999999999999999998764321110 1124577777777
Q ss_pred HhcC-cEe----EEecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceeee
Q psy8199 760 KKIG-LET----CLTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICCG 829 (965)
Q Consensus 760 ~~~~-~~i----~~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~ 829 (965)
.+.+ +.. .+++..++++.++.|+++| +.++.+++|| ++++++.|+++++.+++.++++.++++ |+.+.++
T Consensus 212 ~~~~~i~~~r~~~~~p~~~~~ell~~~~~~~~~~~~l~iglES~s~~vLk~m~k~~~~~~~~~~i~~l~~~~~~i~i~~~ 291 (430)
T TIGR01125 212 GKVGGIYWIRMHYLYPDELTDDVIDLMAEGPKVLPYLDIPLQHASDRILKLMRRPGSGEQQLDFIERLREKCPDAVLRTT 291 (430)
T ss_pred HhcCCccEEEEccCCcccCCHHHHHHHhhCCcccCceEeCCCCCCHHHHhhCCCCCCHHHHHHHHHHHHHhCCCCeEeEE
Confidence 6644 322 2345678999999999996 8999999999 999999999999999999999999998 5678899
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHHHHH
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPLEFI 883 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~~~~ 883 (965)
+|+|+ |||.+++.++++++.+++ ++.+.++.|.|.|||+++..+ ..+.++..
T Consensus 292 ~I~G~PgET~e~~~~t~~fl~~~~--~~~~~~~~~sp~pGT~~~~~~~~i~~~~~~ 345 (430)
T TIGR01125 292 FIVGFPGETEEDFQELLDFVEEGQ--FDRLGAFTYSPEEGTDAFALPDQVPEEVKE 345 (430)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcC--CCEEeeeeccCCCCCccccCCCCCCHHHHH
Confidence 99999 799999999999999999 899999999999999998764 45654443
No 202
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.83 E-value=2.8e-18 Score=194.50 Aligned_cols=333 Identities=16% Similarity=0.147 Sum_probs=213.4
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHh-hccccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLN-KLEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~-~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Al 331 (965)
.++|+..|.. .++ .+|.+.+++.+.+. ....|....+..+.+..+++.+.+..+ ...+++++|+|+++|+..++
T Consensus 30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~ 106 (384)
T PRK06348 30 DIIDLSLGDP--DLI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLAL 106 (384)
T ss_pred CcEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHH
Confidence 5788877643 344 36777776665443 233344344455667777777765433 35679999999999999998
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
.+... +++.|++.+++|.++.......+. ....+|.....+.. .|+++|
T Consensus 107 ~~~~~--------~gd~vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~----------~d~~~l 155 (384)
T PRK06348 107 QSILD--------PGDEVIIHEPYFTPYKDQIEMVGG-------------KPIILETYEEDGFQ----------INVKKL 155 (384)
T ss_pred HHhcC--------CCCEEEEeCCCCcchHHHHHHcCC-------------EEEEecCCcCcCCc----------CCHHHH
Confidence 87743 567899999999887443333322 12233321110100 267888
Q ss_pred HHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccccc-CCCccee---
Q psy8199 412 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA-EIWPDFL--- 487 (965)
Q Consensus 412 e~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~-~~~pDiv--- 487 (965)
++++.. ...+.++++| +|++|.+. +.+.+++|.++|++||+++|.||+|.+|...+.......+ +..+.++
T Consensus 156 ~~~~~~--~~~~v~l~~p--~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 230 (384)
T PRK06348 156 EALITS--KTKAIILNSP--NNPTGAVF-SKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFG 230 (384)
T ss_pred HHhhCc--CccEEEEeCC--CCCCCcCC-CHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEe
Confidence 887752 2223444545 89999876 7888999999999999999999999987433322111111 2233443
Q ss_pred eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHH
Q psy8199 488 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKA 564 (965)
Q Consensus 488 t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~~~ 564 (965)
+|||.++ .| +++|++++++++++.+.. +....+++.+++++.++..+|+..++ +.+.+..+++.+++.+.
T Consensus 231 SfSK~~~l~G-lRiG~~v~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~ 303 (384)
T PRK06348 231 SFSKDFAMTG-WRIGYVIAPDYIIETAKI------INEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKR 303 (384)
T ss_pred cchhccCCcc-ccceeeecCHHHHHHHHH------HHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 6899887 45 899999999999887764 23345677899999999888863211 12344455555666666
Q ss_pred HHcccCCCceeeeeceeEE-EEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCcccCHHHHH
Q psy8199 565 LTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNKNEIQ 635 (965)
Q Consensus 565 L~~l~~~~~i~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~t~~~i~ 635 (965)
|+.+ +++....+.|.| +++.+. ..+. ....+.+.|. +.||.+.|+ .+++|++ +..++++++
T Consensus 304 L~~~---~~~~~~~p~gg~~~~~~~~-~~~~----~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~~~l~ 373 (384)
T PRK06348 304 IESI---PNLSLHPPKGSIYAFINIK-KTGL----SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLA--CTVGIEVLE 373 (384)
T ss_pred HhcC---CCceeccCCeeEEEEEecc-cCCC----CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEE--ecCCHHHHH
Confidence 6543 444444565554 455553 1111 1345667765 579999873 2589999 456888899
Q ss_pred HHHHhhhc
Q psy8199 636 HMTSAIFQ 643 (965)
Q Consensus 636 ~~~~~l~~ 643 (965)
+.++++.+
T Consensus 374 ~al~~l~~ 381 (384)
T PRK06348 374 EAFNRIEK 381 (384)
T ss_pred HHHHHHHh
Confidence 98888754
No 203
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.7e-18 Score=196.68 Aligned_cols=345 Identities=11% Similarity=0.061 Sum_probs=214.8
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC---CCCC-eEEEcCChhH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ---YKLG-HCFYGSDGAS 325 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~---~~~~-~v~~~~sGse 325 (965)
.|+.++|+.+|. ..++ .+|.+.+++.+.+... ..|. ..+..+.+..+++.+.+..+ .+.+ +|++|+|+++
T Consensus 42 ~~~~~i~L~~g~--p~~~-~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~ 117 (410)
T PRK06290 42 PDMELIDMGVGE--PDEM-ADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP 117 (410)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence 467889988874 3455 4678888888766432 1232 24455666777777766544 2345 7999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|+..++.+... +++.|++.+++|.++...+...+. .+..+|........
T Consensus 118 al~~~~~~~~~--------~gd~Vlv~~P~y~~~~~~~~~~g~-------------~v~~v~~~~~~~~~---------- 166 (410)
T PRK06290 118 ALAMLPSCFIN--------PGDVTLMTVPGYPVTGTHTKYYGG-------------EVYNLPLLEENNFL---------- 166 (410)
T ss_pred HHHHHHHHhCC--------CCCEEEEeCCCCccHHHHHHHcCC-------------EEEEEecCCCcCCc----------
Confidence 99988886643 568899999999887433322221 23333332110000
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccc-cccCCCc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-EHAEIWP 484 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~-~~~~~~p 484 (965)
.|++++++.+.. ++.+|++.. ++|++|.+. +.+.+++|.++|++||+++|+||+|..+...+....+ ...+...
T Consensus 167 ~d~~~l~~~~~~---~~k~i~l~n-P~NPTG~v~-s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~ 241 (410)
T PRK06290 167 PDLDSIPKDIKE---KAKLLYLNY-PNNPTGAVA-TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKE 241 (410)
T ss_pred CCHHHHHHhhcc---cceEEEEEC-CCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccc
Confidence 267777777642 345555553 399999877 7788999999999999999999999876333322111 1112111
Q ss_pred -ce--eeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHH
Q psy8199 485 -DF--LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKK 560 (965)
Q Consensus 485 -Di--vt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~ 560 (965)
.+ -+|||.++..++++|++++++++++.+.. .....+.+.+.+++.++.++|+.-+ .+...++++++.+.
T Consensus 242 ~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~------~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 315 (410)
T PRK06290 242 VGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFAT------VKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDK 315 (410)
T ss_pred cEEEEeechhhcCCchhheEeEEeCHHHHHHHHH------HHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 12 26899886323899999999999988865 1122233445678888878775211 12245555666666
Q ss_pred HHHHHHcccCCCceeeeeceeEEEEE-EEeecCccc-h--hhHHHHHHHHHHHcCc-EEeec---CCEEEEeCCc-ccCH
Q psy8199 561 ITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQ-I--ETFSKKFFVAALKNEL-LLRPI---GNTVYLMPPY-ILNK 631 (965)
Q Consensus 561 l~~~L~~l~~~~~i~~v~g~G~~~~i-~~~~~~~~~-~--~~~~~~~~~~l~~~Gi-~~~~~---~~~lR~~p~~-~~t~ 631 (965)
+.+.|++. ++...++.|.|+.+ .+. +... . ......+.+.|.++|+ ++.|+ ++++||+... ..++
T Consensus 316 l~~~L~~~----g~~~~~p~g~f~l~v~lp--~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~ 389 (410)
T PRK06290 316 LVKILNEV----GFKAEMPGGTFYLYVKAP--KGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDE 389 (410)
T ss_pred HHHHHHhC----CCeecCCCeeeEEEEECC--CccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccc
Confidence 66666553 34445566666654 543 1100 0 0124468888888765 44453 3589999321 1477
Q ss_pred HHHHHHHHhhhcccccH
Q psy8199 632 NEIQHMTSAIFQTFNEL 648 (965)
Q Consensus 632 ~~i~~~~~~l~~~~~~~ 648 (965)
++.+++++++.+.+..+
T Consensus 390 ~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 390 EEEDRILEEIKRRLSDV 406 (410)
T ss_pred cchhHHHHHHHHHHhhc
Confidence 78888888887665543
No 204
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.83 E-value=2.6e-18 Score=196.42 Aligned_cols=348 Identities=10% Similarity=0.008 Sum_probs=218.2
Q ss_pred eEEEecCCcccccccccchhcc--CCCCCHHHHHHHHHHHhh--ccccccCCCCcHHHHHHHHHHHhhc--------CCC
Q psy8199 246 SKLITFSGKRYLDAISSWWVNL--FGHSNSYINKALKNQLNK--LEHVMLSNLTHKPVIKLSEKLSSLT--------QYK 313 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~--lGh~~p~v~~av~~~~~~--~~~~~~~~~~~~~~~~la~~l~~~~--------~~~ 313 (965)
.++.+..|+.++||..|..... +- .++.+.+++.+.+.. ...|....+..+.+..+++.+.+.+ ..+
T Consensus 25 ~~~~~~~~~~~i~l~~g~p~~~~~~~-p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~ 103 (412)
T PTZ00433 25 NAKPSPSPKSIIKLSVGDPTLDGNLL-TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIK 103 (412)
T ss_pred hhccCCCCCCeeecCCcCCCCcCCCC-CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCC
Confidence 6677789999999998865321 22 467889999887764 2234333345666677777776532 135
Q ss_pred CCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC-C
Q psy8199 314 LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-R 392 (965)
Q Consensus 314 ~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 392 (965)
.+++++|+|+++|+..++..... +++.|++.+++|.++...+...+ ..+..+|.... .
T Consensus 104 ~~~i~it~G~~~al~~~~~~~~~--------~gd~vlv~~P~y~~~~~~~~~~g-------------~~~~~i~~~~~~~ 162 (412)
T PTZ00433 104 KDNVVLCSGVSHAILMALTALCD--------EGDNILVPAPGFPHYETVCKAYG-------------IEMRFYNCRPEKD 162 (412)
T ss_pred hhhEEEeCChHHHHHHHHHHhcC--------CCCEEEEccCCcccHHHHHHHcC-------------CEEEEEecCcccc
Confidence 67999999999999999987643 56889999999988743322222 12333443211 1
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccc
Q psy8199 393 NINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 472 (965)
Q Consensus 393 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 472 (965)
.. .|+++|++++.+ ...+.++++| +|++|.+. +.+.+++|.++|++||+++|+||+|..|-..+
T Consensus 163 ~~-----------~d~~~l~~~~~~--~~~~i~~~~p--~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 226 (412)
T PTZ00433 163 WE-----------ADLDEIRRLVDD--RTKALIMTNP--SNPCGSNF-SRKHVEDIIRLCEELRLPLISDEIYAGMVFNG 226 (412)
T ss_pred Cc-----------CCHHHHHHHhcc--CceEEEEeCC--CCCCCccc-CHHHHHHHHHHHHHcCCeEEEeccccccccCC
Confidence 11 267788877753 2233444455 89999766 67779999999999999999999998774433
Q ss_pred cc-ccccccCCCccee---eeccccCCCcccceeeee------cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHH
Q psy8199 473 KF-FACEHAEIWPDFL---CLSKGITGGYLPLSLVMT------TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATL 542 (965)
Q Consensus 473 ~~-~~~~~~~~~pDiv---t~sK~l~gG~~pig~v~~------~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L 542 (965)
.. .....+.-..+++ +|||.++..++++|++++ .+++++.+.. . ...+++.++++++++.++|
T Consensus 227 ~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~------~-~~~~~~~~~~~q~a~~~~l 299 (412)
T PTZ00433 227 ATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKR------L-GMLVCGPCSVVQAALGEAL 299 (412)
T ss_pred CCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHH------H-hhccCCCChHHHHHHHHHH
Confidence 21 1111111111233 689988543389999987 2456666644 1 1224567889999888888
Q ss_pred HHHhccc----HHHHHHHHHHHHHHHHHcccCCCceeeeece-eEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEee
Q psy8199 543 EIFNKDN----ILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRP 616 (965)
Q Consensus 543 ~~~~~~~----~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~ 616 (965)
+.- .+. ..+.++++.+.+.+.|++ +.++..+.+. |+++.+.+. ...-.......++.+.|+ ++||.+.|
T Consensus 300 ~~~-~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~~p~gg~f~~~~l~-~~~~~~~~~~~~~~~~ll~~~gV~v~p 374 (412)
T PTZ00433 300 LNT-PQEHLEQIVAKLEEGAMVLYNHIGE---CIGLSPTMPRGSMFLMSRLD-LEKFRDIKSDVEFYEKLLEEENVQVLP 374 (412)
T ss_pred hcC-cHHHHHHHHHHHHHHHHHHHHHHhc---CCCCcccCCCeeEEEEEEec-hhhcCCCCCHHHHHHHHHHhcCEEEeC
Confidence 531 122 334444555555555543 2344444555 555665553 100000001345777776 58999988
Q ss_pred cC-----CEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 617 IG-----NTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 617 ~~-----~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+. +++|++ +...++++++.++++.+.+
T Consensus 375 g~~f~~~~~iRis--~~~~~e~l~~al~~l~~~~ 406 (412)
T PTZ00433 375 GEIFHMPGFTRLT--ISRPVEVLREAVERIKAFC 406 (412)
T ss_pred ccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHH
Confidence 52 689999 5566888888888876544
No 205
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.83 E-value=3.8e-18 Score=190.97 Aligned_cols=332 Identities=13% Similarity=0.038 Sum_probs=209.7
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcC--CCCC-eEEEcCChhHHHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEVAL 331 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~-~v~~~~sGseA~~~Al 331 (965)
+.+|+.+|.. .++ ..|++.+++++.......|....+..+.+..+++.+.+..+ .+.+ +|++|+|+++|+..++
T Consensus 1 ~~~~~~~g~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 1 RLFDFGTGDP--KEP-TPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred CeEeccCCCC--CCC-CCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 3567777754 344 37889999988765544444444556777778887776644 3455 8999999999998887
Q ss_pred HHHHHHHHhcCCCC--ceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLN--KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 332 ~~a~~~~~~~g~~~--~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
..+.. ++ ++.|++.+++|.++...+...+. .+..++.....+. ..|++
T Consensus 78 ~~~~~-------~g~~~d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~----------~~d~~ 127 (350)
T TIGR03537 78 LVFID-------PEEDRRRVIFGTPGYPVYERGALFAGG-------------EPTAVKLKKEDGF----------LLRLE 127 (350)
T ss_pred HHHcC-------CCCCCceEEEcCCCCcchHHHHHhcCC-------------EEEEcccCcccCC----------ccCHH
Confidence 76533 22 26899999999888544333222 2223332111110 02678
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee--
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL-- 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv-- 487 (965)
++++++.+ ++.++++.+ ++|++|.+. +.+.+++|.++|++||+++|+||+|..+...+........+. +.++
T Consensus 128 ~l~~~~~~---~~~~i~i~~-p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~ 201 (350)
T TIGR03537 128 KVEKSILE---ETKIVWINY-PHNPTGATA-PRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGI-ENVLAF 201 (350)
T ss_pred HHHHhhhh---ccEEEEEeC-CCCCcCccc-CHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCc-CCEEEE
Confidence 88887753 345555555 589999765 777899999999999999999999975422222211111221 2233
Q ss_pred -eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHH
Q psy8199 488 -CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKAL 565 (965)
Q Consensus 488 -t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L 565 (965)
+|||.++..++++|++++++++.+.+.. .....+.+.++++++++.+++..-. .....++++++.+.+.+.|
T Consensus 202 ~s~SK~~g~~GlRiG~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l 275 (350)
T TIGR03537 202 HSLSKRSGMTGYRSGFVAGDEKLISFLRK------LRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFF 275 (350)
T ss_pred eecccccCCccccceeeecCHHHHHHHHH------HHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 5799885433899999999988887765 1222334556677777777764100 0123444555555555555
Q ss_pred HcccCCCceeeeeceeE-EEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEEEeCCcccCHHHHHHH
Q psy8199 566 TSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHM 637 (965)
Q Consensus 566 ~~l~~~~~i~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~~p~~~~t~~~i~~~ 637 (965)
+.. ++....+.|. ++.+.+. +. .....+.+.|.++||.+.|+ .+++|++ +..++++++++
T Consensus 276 ~~~----g~~~~~~~g~~~~~~~~~--~~----~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~--~~~~~~~~~~~ 343 (350)
T TIGR03537 276 NKV----GLEYLYPDATFYLWVKVP--SG----IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVA--LVPTLEECEEA 343 (350)
T ss_pred HHC----CCcccCCCeEEEEEEECC--CC----CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEE--ecCCHHHHHHH
Confidence 443 3443445555 4556553 21 11346788888999999863 2689998 45678889988
Q ss_pred HHhhhc
Q psy8199 638 TSAIFQ 643 (965)
Q Consensus 638 ~~~l~~ 643 (965)
++++.+
T Consensus 344 l~~~~~ 349 (350)
T TIGR03537 344 LRLWER 349 (350)
T ss_pred HHHHhc
Confidence 887753
No 206
>PRK14325 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.82 E-value=4.3e-19 Score=203.02 Aligned_cols=197 Identities=11% Similarity=0.170 Sum_probs=160.2
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCC-c----ccHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELK-D----RDLDNIENMIC 757 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~-~----~~~~~~~~~~~ 757 (965)
..+.+ ++|||++|.||..+...++ ++.+++++|+++++.+.+.|+++|.|++...... . .....+.++++
T Consensus 149 ~~i~i-srGCp~~CsFC~~p~~~G~----~~sr~~e~Iv~Ei~~l~~~g~~ei~l~d~~~~~y~~~~~~~~~~~l~~Ll~ 223 (444)
T PRK14325 149 AFVSI-MEGCDKYCTFCVVPYTRGE----EVSRPVDDVLAEVAQLAEQGVREITLLGQNVNAYRGEGPDGEIADFAELLR 223 (444)
T ss_pred EEEEh-hhCCCCCCCccccCcccCC----cccCCHHHHHHHHHHHHHCCCcEEEEEeeccccccCCCCCCCcchHHHHHH
Confidence 44566 8999999999987653332 2347999999999999999999999987654321 0 11346777777
Q ss_pred HHHhc-C---cEeEE-ecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCcee
Q psy8199 758 EVKKI-G---LETCL-TLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINIC 827 (965)
Q Consensus 758 ~i~~~-~---~~i~~-~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~ 827 (965)
.+.+. + +.+.. ++..++++.++.|+++| +.++++++|| ++++++.|+++++.+++.++++.++++ |+.+.
T Consensus 224 ~l~~~~~~~~ir~~~~~p~~~~~ell~~l~~~~~~~~~l~igiqSgs~~vLk~m~R~~~~~~~~~~i~~lr~~~~gi~v~ 303 (444)
T PRK14325 224 LVAAIDGIERIRYTTSHPRDFTDDLIEAYADLPKLVPFLHLPVQSGSDRILKAMNRGHTALEYKSIIRKLRAARPDIAIS 303 (444)
T ss_pred HHHhcCCccEEEEccCCcccCCHHHHHHHHcCCcccCceeccCCcCCHHHHHhCCCCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 77653 3 33322 56678999999999986 8999999999 999999999999999999999999997 78999
Q ss_pred eeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHHHHHHHH
Q psy8199 828 CGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPLEFIRTI 886 (965)
Q Consensus 828 ~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~~~~~~i 886 (965)
+++|+|+ |||.+++.++++++.+++ ++.+.++.|.|.||||++..+ +.+.+...+..
T Consensus 304 ~~~IvG~PgET~ed~~~tl~~i~~~~--~~~~~~~~~sp~pGT~~~~~~~~v~~~~~~~r~ 362 (444)
T PRK14325 304 SDFIVGFPGETDEDFEATMKLIEDVG--FDQSFSFIYSPRPGTPAADLPDDVPEEVKKERL 362 (444)
T ss_pred eeEEEECCCCCHHHHHHHHHHHHhcC--CCeeeeeeccCCCCCchhhCCCCCCHHHHHHHH
Confidence 9999999 799999999999999999 899999999999999999865 55665443333
No 207
>TIGR01212 radical SAM protein, TIGR01212 family. This uncharacterized protein family shows significant similarity to TIGR01211, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain.
Probab=99.82 E-value=4.2e-19 Score=191.16 Aligned_cols=217 Identities=19% Similarity=0.272 Sum_probs=168.7
Q ss_pred HHhcCCCeEEEeEeEeeccCCCCC--------CCCCCCCCCcCCCCcc---cccCCCH-HHHHHHHHHHHHCCCCEEEEe
Q psy8199 671 RKYFDANEIELAVLLSIKTGGCTE--------DCGYCPQSTHYNTEIT---ATKILSI-ESVITAAQKAKSDGATRFCMG 738 (965)
Q Consensus 671 ~~~~~g~~~~~~~~i~~~s~~C~~--------~C~fC~~~~~~~~~~~---~~~~~~~-eei~~~~~~~~~~g~~~i~l~ 738 (965)
|++| |.+|+- ..+.. .-.||| .|.||+.... + ... ..+..+. +||.+.+....+.+...++|+
T Consensus 10 ~~~~-g~~v~k-~~~~~-g~~cpnrdg~~~~~gC~FC~~~~~-~-~~~~~~~~~~~~i~~qi~~~~~~~~~~~~~~iyf~ 84 (302)
T TIGR01212 10 KERY-GQKVFK-ITLHG-GFSCPNRDGTKGRGGCTFCNDASR-P-IFADEYTQARIPIKEQIKKQMKKYKKDKKFIAYFQ 84 (302)
T ss_pred HHHc-CCceEE-eecCC-CCCCCCCCCCCCCCCcccCCCCCC-c-cccccccccCCCHHHHHHHHHHHhhccCEEEEEEE
Confidence 6667 666664 34455 788999 5999986542 2 111 1123443 334444444433333347777
Q ss_pred eccCCCCcccHHHHHHHHHHHHhc----CcEeEEecCCCCHHHHHHHH---HhCC-CeEeccCCC-CHHHHhcccCCCCH
Q psy8199 739 AAWRELKDRDLDNIENMICEVKKI----GLETCLTLGMLNENQAYRLK---KVGL-DYYNHNLDT-SPKLYGDIISTRDY 809 (965)
Q Consensus 739 ~g~~~~~~~~~~~~~~~~~~i~~~----~~~i~~~~~~~~~e~l~~Lk---~aG~-~~i~i~~es-~~~~~~~i~~~~~~ 809 (965)
+|.+ ...+.+.+.++++.+++. ++.+.+++..++++.++.|+ ++|+ .++.+|+|| ++++++.++++++.
T Consensus 85 ggt~--t~l~~~~L~~l~~~i~~~~~~~~isi~trpd~l~~e~l~~L~~l~~~G~~~~i~lGlQS~~d~~L~~i~Rg~t~ 162 (302)
T TIGR01212 85 AYTN--TYAPVEVLKEMYEQALSYDDVVGLSVGTRPDCVPDEVLDLLAEYVERGYEVWVELGLQTAHDKTLKKINRGHDF 162 (302)
T ss_pred CCCc--CCCCHHHHHHHHHHHhCCCCEEEEEEEecCCcCCHHHHHHHHHhhhCCceEEEEEccCcCCHHHHHHHcCcChH
Confidence 7743 456789999999888763 35556688889998777666 5699 579999999 99999999999999
Q ss_pred HHHHHHHHHHHHcCCceeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC------CCCCHHHH
Q psy8199 810 ENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS------SILDPLEF 882 (965)
Q Consensus 810 ~~~~~~i~~~~~~Gi~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~------~~~~~~~~ 882 (965)
++..++++.++++|+.+++++|+|+ |||.+++.++++++.+++ ++.+.+++++|.|||+|++. .+++.+++
T Consensus 163 ~~~~~ai~~l~~~gi~v~~~lI~GlPget~e~~~~t~~~l~~l~--~d~i~i~~l~~~pgT~L~~~~~~g~~~~~~~~e~ 240 (302)
T TIGR01212 163 ACYVDAVKRARKRGIKVCSHVILGLPGEDREEMMETAKIVSLLD--VDGIKIHPLHVVKGTKMAKMYEKGELKTLSLEEY 240 (302)
T ss_pred HHHHHHHHHHHHcCCEEEEeEEECCCCCCHHHHHHHHHHHHhcC--CCEEEEEEEEecCCCHHHHHHHcCCCCCCCHHHH
Confidence 9999999999999999999999999 799999999999999999 99999999999999999864 66788998
Q ss_pred HHHHHHHHHHCCCC
Q psy8199 883 IRTIAVARITMPTS 896 (965)
Q Consensus 883 ~~~ia~~R~~lp~~ 896 (965)
++.++.+...+|..
T Consensus 241 ~~~~~~~l~~l~~~ 254 (302)
T TIGR01212 241 ISLACDFLEHLPPE 254 (302)
T ss_pred HHHHHHHHHhCCcC
Confidence 88888887778764
No 208
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.82 E-value=4.8e-18 Score=192.91 Aligned_cols=337 Identities=15% Similarity=0.096 Sum_probs=215.1
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcCC--C-CCeEEEcCChhHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQY--K-LGHCFYGSDGASAVEV 329 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~--~-~~~v~~~~sGseA~~~ 329 (965)
..+||+..|.. .++. ++.+.+++.+.+... ..|....+..+..+.+++.+....+. . .++|++++|+++|+..
T Consensus 30 ~~~i~l~~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGEP--DFTT-PDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCCC--CCCC-CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 46899888754 3453 677888888877542 23333344556667777777655442 2 3589999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
++.... .+++.|++.+++|.++.......+ ..+..++....... .|++
T Consensus 107 ~~~~~~--------~~gd~vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~-----------~d~~ 154 (391)
T PRK07309 107 SLTAIL--------EPGDKVLLPAPAYPGYEPIVNLVG-------------AEIVEIDTTENDFV-----------LTPE 154 (391)
T ss_pred HHHHhc--------CCCCEEEEeCCCCcchHHHHHHcC-------------CEEEEEecCCcCCc-----------CCHH
Confidence 988663 256889999999988743222211 12333333211111 2678
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccccCCCccee-
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWPDFL- 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~~~pDiv- 487 (965)
+|++++++..+++.+|++.. ++|++|.+. +.+.+++|.++|++||+++|+||+|..|-..|.. .....+. ..+++
T Consensus 155 ~l~~~~~~~~~~~~~i~l~~-P~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~ 231 (391)
T PRK07309 155 MLEKAILEQGDKLKAVILNY-PANPTGVTY-SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTIL 231 (391)
T ss_pred HHHHHhhccCCCeEEEEEEC-CCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEE
Confidence 88888865444566666663 488999766 6677999999999999999999999877433421 1111111 12233
Q ss_pred --eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHH
Q psy8199 488 --CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKIT 562 (965)
Q Consensus 488 --t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~~~~~~~~~~~~~~l~ 562 (965)
+|||.++ .| +++|++++++++++.+.. .....+.+.+++++.++.+.|+... .....++++++.+++.
T Consensus 232 ~~S~SK~~g~~G-lRvG~~v~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 304 (391)
T PRK07309 232 INGLSKSHAMTG-WRIGLIFAPAEFTAQLIK------SHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYII 304 (391)
T ss_pred EecChhhccCcc-ceeEEEEeCHHHHHHHHH------HHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHH
Confidence 6899886 45 899999999999888765 1122334567888888888875321 1223455566666677
Q ss_pred HHHHcccCCCceeeeeceeEEE-EEEEeecCccchhhHHHHHHHH-HHHcCcEEeec-------CCEEEEeCCcccCHHH
Q psy8199 563 KALTSLITHPKIINFRQKGMIW-AFDVIIEDPEQIETFSKKFFVA-ALKNELLLRPI-------GNTVYLMPPYILNKNE 633 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~g~G~~~-~i~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~-------~~~lR~~p~~~~t~~~ 633 (965)
+.|++. ++....+.|.++ ++.+. ++. ......+.+. +.++||.+.|+ ++++|++ +..+.++
T Consensus 305 ~~l~~~----~~~~~~p~gg~~~~~~l~--~~~--~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~~~ 374 (391)
T PRK07309 305 EKMTDL----GFKIIKPDGAFYIFAKIP--AGY--NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLS--YAASMET 374 (391)
T ss_pred HHHHHC----CCeecCCCeeEEEEEECC--CCC--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE--ecCCHHH
Confidence 766553 344445555544 44443 110 0112345555 45789999874 2589999 4457788
Q ss_pred HHHHHHhhhccc
Q psy8199 634 IQHMTSAIFQTF 645 (965)
Q Consensus 634 i~~~~~~l~~~~ 645 (965)
++++++++.+.+
T Consensus 375 l~~~i~~l~~~~ 386 (391)
T PRK07309 375 IKEAMKRLKEYM 386 (391)
T ss_pred HHHHHHHHHHHH
Confidence 888888886544
No 209
>PRK14329 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.82 E-value=5.9e-19 Score=201.69 Aligned_cols=192 Identities=11% Similarity=0.136 Sum_probs=155.8
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCC---cc-----cHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELK---DR-----DLDNIE 753 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~---~~-----~~~~~~ 753 (965)
.+.+.+ |+|||++|.||..+...+ +++.+++++|+++++.+.+.|+++|.|.+...... .. ....+.
T Consensus 169 ~a~i~i-srGCp~~CsFC~ip~~~G----~~rsrs~e~Vv~Ei~~l~~~g~~eI~l~~~~~~~y~~d~~~~~~~~~~~l~ 243 (467)
T PRK14329 169 SAFVSI-MRGCDNMCTFCVVPFTRG----RERSRDPESILNEVRDLFAKGYKEVTLLGQNVDSYLWYGGGLKKDEAVNFA 243 (467)
T ss_pred EEEEEe-ccCcccCCCCCccccccC----CcccCCHHHHHHHHHHHHHCCCeEEEEEeecccccccccCCccccccccHH
Confidence 356677 999999999998765322 35668999999999999999999999987532110 00 123567
Q ss_pred HHHHHHHhc--CcEeE---EecCCCCHHHHHHHHHh--CCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--C
Q psy8199 754 NMICEVKKI--GLETC---LTLGMLNENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--G 823 (965)
Q Consensus 754 ~~~~~i~~~--~~~i~---~~~~~~~~e~l~~Lk~a--G~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--G 823 (965)
++++.+.+. +..+. .++..++++.++.|+++ |+.++++++|| ++++++.|++.++.+++.++++.++++ +
T Consensus 244 ~Ll~~l~~~~~~~~ir~~~~~p~~l~~ell~~m~~~~~g~~~i~iglQSgsd~vLk~m~R~~t~~~~~~~i~~ir~~~~~ 323 (467)
T PRK14329 244 QLLEMVAEAVPDMRIRFSTSHPKDMTDDVLEVMAKYDNICKHIHLPVQSGSDRILKLMNRKYTREWYLDRIDAIRRIIPD 323 (467)
T ss_pred HHHHHHHhcCCCcEEEEecCCcccCCHHHHHHHHhCCCCCCeEEeCCCcCCHHHHHhcCCCCCHHHHHHHHHHHHHhCCC
Confidence 777776642 23332 24567899999999997 89999999999 999999999999999999999999997 6
Q ss_pred CceeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC-C-CCCCHH
Q psy8199 824 INICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG-S-SILDPL 880 (965)
Q Consensus 824 i~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~-~-~~~~~~ 880 (965)
+.+.+.+|+|+ |||.+++.++++++++++ ++.+.++.|.|.||||++. . ...+.+
T Consensus 324 ~~i~~d~IvGfPgET~edf~~tl~~i~~l~--~~~~~v~~~sp~pGT~~~~~~~~~v~~~ 381 (467)
T PRK14329 324 CGISTDMIAGFPTETEEDHQDTLSLMEEVG--YDFAFMFKYSERPGTYAARKLEDDVPEE 381 (467)
T ss_pred CEEEEeEEEeCCCCCHHHHHHHHHHHHhhC--CCeEeeeEecCCCCChhhhhCCCCCCHH
Confidence 77889999999 799999999999999999 8999999999999999985 3 234443
No 210
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.82 E-value=2.9e-18 Score=194.85 Aligned_cols=336 Identities=11% Similarity=0.053 Sum_probs=208.2
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC--CCCC-eEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~-~v~~~~sGseA 326 (965)
+|+.++|+..|.. .++ .+|.+.+++.+.+... ..|....+..+.+..+++.+.+..+ .+.+ +|++|+|+++|
T Consensus 28 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGSS--DLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 5778899877743 344 3788999998877542 1232234455667777777766544 3556 69999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..++++... +++.|++.+++|.++...+...+. .+..+|........ .
T Consensus 105 l~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~----------~ 153 (388)
T PRK07366 105 TAHLPLAVLN--------PGDFALLLDPGYPSHAGGVYLAGG-------------QIYPMPLRAENDFL----------P 153 (388)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCcchHHHHHhcCC-------------EEEEEECCCccCCC----------C
Confidence 9999886643 568899999999888544333322 22333331110000 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc--ccccccCC-C
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF--FACEHAEI-W 483 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~--~~~~~~~~-~ 483 (965)
|++++++.+. .+..+|++.+ ++|++|.+. +.+.+++|.++|++||+++|.||+|..|...+.. .....+.- .
T Consensus 154 d~~~l~~~~~---~~~k~i~l~~-p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 228 (388)
T PRK07366 154 VFADIPTEVL---AQARLMVLSY-PHNPTTAIA-PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEK 228 (388)
T ss_pred CHHHHHHhhc---ccceEEEEeC-CCCCCCccC-CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCc
Confidence 5566665553 2344455555 599999876 7778999999999999999999999887433321 11111111 1
Q ss_pred ccee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHH
Q psy8199 484 PDFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQD 557 (965)
Q Consensus 484 pDiv---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~ 557 (965)
+.++ +|||.++ .| +++|++++++++++.+.. ......++..+..+.+++++|..-.+ +...+.++++
T Consensus 229 ~~vi~~~SfSK~~g~~G-lRiG~~v~~~~li~~l~~------~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~ 301 (388)
T PRK07366 229 SVSIEFFTLSKSYNMGG-FRIGFAIGNAQLIQALRQ------VKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQR 301 (388)
T ss_pred ccEEEEeecccccCCcc-hhheehcCCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 2233 7999886 45 899999999999988765 11112223333334555666631100 1234455556
Q ss_pred HHHHHHHHHcccCCCceeee-eceeEEEEEEEeecCccchhhHHHHHHHHH-HHcCcEEeec-------CCEEEEeCCcc
Q psy8199 558 MKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPI-------GNTVYLMPPYI 628 (965)
Q Consensus 558 ~~~l~~~L~~l~~~~~i~~v-~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~-------~~~lR~~p~~~ 628 (965)
.+++.+.|++. ++... +.-|+++++.+. +.. ......+.+.+ .++||.+.|+ .+++|++ +.
T Consensus 302 r~~l~~~L~~~----~~~~~~p~~g~f~~~~~~--~~~--~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~ 371 (388)
T PRK07366 302 RDAFINALHQI----GWPVPLPEATMYVWAKLP--EPW--QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFA--LV 371 (388)
T ss_pred HHHHHHHHHHC----CCcccCCCeeEEEEEECC--ccc--CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEE--ec
Confidence 66666666543 33323 344666666654 110 00123565665 5789999874 2689999 55
Q ss_pred cCHHHHHHHHHhhhc
Q psy8199 629 LNKNEIQHMTSAIFQ 643 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~ 643 (965)
.+++++++.++++.+
T Consensus 372 ~~~~~l~~~l~rl~~ 386 (388)
T PRK07366 372 HDPDILEEAVERIAA 386 (388)
T ss_pred CCHHHHHHHHHHHHH
Confidence 678899999888764
No 211
>PRK14339 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.82 E-value=4.7e-19 Score=199.98 Aligned_cols=192 Identities=16% Similarity=0.181 Sum_probs=156.9
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcc------cHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDR------DLDNIENM 755 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~------~~~~~~~~ 755 (965)
.+.+.+ |+|||++|.||..+...++ .+.+++|+|+++++.+.+.|+++|.|++........ ....+.++
T Consensus 128 ~a~i~i-srGC~~~CsFC~ip~~rG~----~~sr~~e~I~~Ei~~l~~~G~keI~l~~~~~~~yg~d~~~~~~~~~l~~L 202 (420)
T PRK14339 128 KSLVNI-SIGCDKKCTYCIVPHTRGK----EISIPMDLILKEAEKAVNNGAKEIFLLGQNVNNYGKRFSSEHEKVDFSDL 202 (420)
T ss_pred EEEEEe-cCCCCCCCCcCCcccccCC----CCCCCHHHHHHHHHHHHHCCCcEEEEeeeccccccCCCcCCcccccHHHH
Confidence 467788 9999999999998754332 233689999999999999999999998865321100 11246777
Q ss_pred HHHHHh-cCc---Ee-EEecCCCCHHHHHHHHHh--CCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCc
Q psy8199 756 ICEVKK-IGL---ET-CLTLGMLNENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GIN 825 (965)
Q Consensus 756 ~~~i~~-~~~---~i-~~~~~~~~~e~l~~Lk~a--G~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~ 825 (965)
++.+.+ .++ .+ +.++..++++.++.|+++ |+.++++++|| ++++++.|+++++.++++++++.++++ |+.
T Consensus 203 l~~l~~~~g~~~ir~~s~~p~~~~~ell~~~~~~~~~~~~l~iglQSgsd~vLk~M~R~~t~~~~~~~v~~lr~~~p~i~ 282 (420)
T PRK14339 203 LDKLSEIEGLERIRFTSPHPLHMDDKFLEEFAKNPKICKSIHMPLQSGSSEILKAMKRGYTKEWFLNRAEKLRALVPEVS 282 (420)
T ss_pred HHHHhcCCCccEEEECCCChhhcCHHHHHHHHcCCCccCceEeCCccCCHHHHHhccCCCCHHHHHHHHHHHHHHCCCCE
Confidence 777665 233 33 234556789999999998 58999999999 999999999999999999999999997 788
Q ss_pred eeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHH
Q psy8199 826 ICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPL 880 (965)
Q Consensus 826 v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~ 880 (965)
+.+.+|+|+ |||.+|+.++++++.+++ ++.+.++.|.|.||||++..+ +.+.+
T Consensus 283 i~~d~IvGfPgETeedf~~Tl~fl~~l~--~~~~~~f~~sp~pGT~a~~~~~~v~~~ 337 (420)
T PRK14339 283 ISTDIIVGFPGESDKDFEDTMDVLEKVR--FEQIFSFKYSPRPLTEAAAWKNQVDEE 337 (420)
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHHhcC--CCEEeeEecCCCCCCchhhCCCCCCHH
Confidence 999999999 799999999999999999 888899999999999988764 45554
No 212
>PRK14340 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.82 E-value=5.7e-19 Score=200.22 Aligned_cols=191 Identities=10% Similarity=0.160 Sum_probs=157.2
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcc--cHHHHHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDR--DLDNIENMICEV 759 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~--~~~~~~~~~~~i 759 (965)
...+.+ |+|||++|.||..+...+ +++.+++++|+++++.+.+.|++++.|++........ ....+.++++.+
T Consensus 150 ~a~l~i-srGC~~~CsFC~ip~~rG----~~rsr~~e~Vv~Ei~~l~~~G~~ei~l~~~~~~~y~d~~~~~~l~~Ll~~l 224 (445)
T PRK14340 150 SAFVPV-MRGCNNMCAFCVVPFTRG----RERSHPFASVLDEVRALAEAGYREITLLGQNVNSYSDPEAGADFAGLLDAV 224 (445)
T ss_pred EEEEEe-ccCCCCCCCCCCcccccC----CCcCCCHHHHHHHHHHHHHCCCeEEEEeecccchhhccCCCchHHHHHHHH
Confidence 355777 999999999998775322 3566899999999999999999999998765321110 112466777766
Q ss_pred Hhc--CcEeEE---ecCCCCHHHHHHHHHh--CCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceeee
Q psy8199 760 KKI--GLETCL---TLGMLNENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICCG 829 (965)
Q Consensus 760 ~~~--~~~i~~---~~~~~~~e~l~~Lk~a--G~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~ 829 (965)
.+. +..+.+ ++..++++.++.|+++ |+.++++++|| ++++++.|+++++.+++.++++.+++. |+.+.+.
T Consensus 225 ~~~~~~~rir~~~~~p~~l~~ell~~~~~~~~g~~~l~iglQSgsd~vLk~m~R~~t~~~~~~~v~~lr~~~pgi~i~td 304 (445)
T PRK14340 225 SRAAPEMRIRFTTSHPKDISESLVRTIAARPNICNHIHLPVQSGSSRMLRRMNRGHTIEEYLEKIALIRSAIPGVTLSTD 304 (445)
T ss_pred hhcCCCcEEEEccCChhhcCHHHHHHHHhCCCCCCeEEECCCcCCHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCEEecc
Confidence 542 333332 4566789999999996 79999999999 999999999999999999999999998 9999999
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC-C-CCCCH
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG-S-SILDP 879 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~-~-~~~~~ 879 (965)
+|+|+ |||.+++.++++++++++ ++.+.++.|.|.||||++. . ...+.
T Consensus 305 ~IvGfPgET~edf~~tl~~~~~~~--~~~~~~f~~sp~pGT~~~~~~~~~v~~ 355 (445)
T PRK14340 305 LIAGFCGETEEDHRATLSLMEEVR--FDSAFMFYYSVRPGTLAARTLPDDVPE 355 (445)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcC--CCEEeeEEecCCCCChhhhhCCCCCCH
Confidence 99999 799999999999999999 8999999999999999985 3 34553
No 213
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=3.4e-18 Score=191.68 Aligned_cols=322 Identities=15% Similarity=0.171 Sum_probs=204.3
Q ss_pred cCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 330 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~A 330 (965)
.+++.++|+..| .+++| .+|.+.+|+.+.+..... |+.....++.+.+++.++.+.+++++++|+++++..+
T Consensus 17 ~~~~~~i~l~~~--~~~~~-~p~~~~~a~~~~~~~~~~-----y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~ 88 (356)
T PRK08056 17 ISPDQLLDFSAN--INPLG-MPVSLKRAIIDNLDCAER-----YPDVEYRHLHQALARHHQVPASWILAGNGETESIFAV 88 (356)
T ss_pred CChhhEEEeccc--cCCCC-CCHHHHHHHHHHHHhccc-----CcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 456788998765 45677 678899999887765432 3333457788888888877788999999999999988
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHH
Q psy8199 331 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 410 (965)
Q Consensus 331 l~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 410 (965)
++.. . ++ .+++..++|..+...+...+ ..+..+|.....+.. .| ++
T Consensus 89 ~~~l-~--------~g-~viv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~----------~~-~~ 134 (356)
T PRK08056 89 VSGL-K--------PR-RAMIVTPGFAEYRRALQQVG-------------CEIRRYSLREADGWQ----------LT-DA 134 (356)
T ss_pred HHHh-C--------CC-CEEEeCCCcHHHHHHHHHcC-------------CeEEEEecccccCCC----------cc-HH
Confidence 8754 2 33 46778888876632222111 123334332111100 12 23
Q ss_pred HHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---
Q psy8199 411 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--- 487 (965)
Q Consensus 411 le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--- 487 (965)
+++.+. +++.+|++.. ++|++|.+ .+.+.+++|.++|++||+++|+||+|.+|...+..+.. .....+.++
T Consensus 135 ~~~~~~---~~~k~v~l~~-p~NPTG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~i~~~ 208 (356)
T PRK08056 135 ILEALT---PDLDCLFLCT-PNNPTGLL-PERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIP-QLADNPHLWVLR 208 (356)
T ss_pred HHHhcc---CCCCEEEEeC-CcCCCCCC-CCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHH-HhccCCCEEEEE
Confidence 333443 2334444433 49999985 47888999999999999999999999887533321111 111113333
Q ss_pred eeccccC-CCcccceeeeec-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHH
Q psy8199 488 CLSKGIT-GGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKA 564 (965)
Q Consensus 488 t~sK~l~-gG~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~ 564 (965)
+|||.++ .| +++|+++++ +++++.+.. ....++.+.++++++.++|+--. .....+.++++.+++.+.
T Consensus 209 S~SK~~~~~G-~RiG~~v~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~ 279 (356)
T PRK08056 209 SLTKFYAIPG-LRLGYLVNSDDAAVARMRR--------QQMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQA 279 (356)
T ss_pred echhhccCcc-hhheeeecCCHHHHHHHHH--------hCCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6899887 45 899999984 677776654 12345567788888777774100 112344556666666666
Q ss_pred HHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-------CEEEEeCCcccCHHHHHHH
Q psy8199 565 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-------NTVYLMPPYILNKNEIQHM 637 (965)
Q Consensus 565 L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~lR~~p~~~~t~~~i~~~ 637 (965)
|+.+ +++...++.|.++++.+. .+ ...+.+.|.++||.++++. +++|++ ..+.++.+.+
T Consensus 280 L~~~---~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis---~~~~~~~~~l 345 (356)
T PRK08056 280 LCAL---PLLTVWPGRANYLFLRCE-RP-------DIDLQRALLTQRILIRSCANYPGLDSRYYRVA---IRSAAENERL 345 (356)
T ss_pred HhcC---CCcEEcCCCCcEEEEEcC-CC-------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---EcCHHHHHHH
Confidence 6544 344444556777766553 11 2357788889999998632 589999 4567778888
Q ss_pred HHhhhc
Q psy8199 638 TSAIFQ 643 (965)
Q Consensus 638 ~~~l~~ 643 (965)
++++.+
T Consensus 346 ~~~l~~ 351 (356)
T PRK08056 346 LAALRN 351 (356)
T ss_pred HHHHHH
Confidence 777754
No 214
>PRK14335 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.82 E-value=7.8e-19 Score=200.30 Aligned_cols=193 Identities=10% Similarity=0.163 Sum_probs=157.9
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCc-----ccHHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKD-----RDLDNIENMI 756 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~-----~~~~~~~~~~ 756 (965)
.+.+.+ ++|||++|.||..+...++ ++.+++++|+++++.+.+.|+++|.|.+....... .....+.+++
T Consensus 153 ~~~i~I-~rGC~~~CsfC~~p~~rG~----~rsr~~e~Vv~Ei~~l~~~G~~ei~l~g~~~~~y~~~~~~~~~~~~~~Ll 227 (455)
T PRK14335 153 QSFIPI-MNGCNNFCSYCIVPYVRGR----EISRDLDAILQEIDVLSEKGVREITLLGQNVNSYRGRDREGNIVTFPQLL 227 (455)
T ss_pred eEEEEh-hcCCCCCCCCCCcccCCCC----CccCCHHHHHHHHHHHHHCCCeEEEEEeecccccccccccCCccCHHHHH
Confidence 355667 8999999999997753322 34579999999999999999999999886543110 0112466777
Q ss_pred HHHHh-----cCcE-e---EEecCCCCHHHHHHHHH--hCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--
Q psy8199 757 CEVKK-----IGLE-T---CLTLGMLNENQAYRLKK--VGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV-- 822 (965)
Q Consensus 757 ~~i~~-----~~~~-i---~~~~~~~~~e~l~~Lk~--aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~-- 822 (965)
+.+.+ .++. + ++++..++++.++.|++ +|+.++++++|| ++++++.|+++++.+++.++++.+++.
T Consensus 228 ~~l~~~~~~~~~i~~ir~~s~~p~~i~~ell~~m~~~~~gc~~l~iglQSgsd~vLk~m~R~~t~e~~~~~v~~ir~~~p 307 (455)
T PRK14335 228 RHIVRRAEVTDQIRWIRFMSSHPKDLSDDLIATIAQESRLCRLVHLPVQHGSNGVLKRMNRSYTREHYLSLVGKLKASIP 307 (455)
T ss_pred HHHHHhhcccCCceEEEEeecCcccCCHHHHHHHHhCCCCCCeEEEccCcCCHHHHHHcCCCCCHHHHHHHHHHHHHhCC
Confidence 66631 2232 2 34677789999999998 589999999999 999999999999999999999999998
Q ss_pred CCceeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHHH
Q psy8199 823 GINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPLE 881 (965)
Q Consensus 823 Gi~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~~ 881 (965)
|+.+.+++|+|+ |||.+++.++++++++++ ++.+.++.|.|.||||++..+ ..+.+.
T Consensus 308 gi~i~~d~IvGfPgET~edf~~Tl~~i~~l~--~~~~~~~~~sp~pGT~~~~~~~~v~~~~ 366 (455)
T PRK14335 308 NVALSTDILIGFPGETEEDFEQTLDLMREVE--FDSAFMYHYNPREGTPAYDFPDRIPDEV 366 (455)
T ss_pred CCEEEEEEEEeCCCCCHHHHHHHHHHHHhcC--CCeEEEEEecCCCCCchhhCCCCCCHHH
Confidence 999999999999 799999999999999999 899999999999999999865 455543
No 215
>PRK14326 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.82 E-value=8.5e-19 Score=201.32 Aligned_cols=186 Identities=15% Similarity=0.171 Sum_probs=154.7
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCC---cccHHHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELK---DRDLDNIENMICEV 759 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~---~~~~~~~~~~~~~i 759 (965)
+.+.+ |+|||++|.||..+...+ +++.+++|+|+++++.+.+.|+++|.|.+...... ..+...+.++++.+
T Consensus 159 a~v~i-srGCp~~CsFC~ip~~rG----~~rsr~~e~Vv~Ei~~l~~~g~~ei~l~d~n~~~yG~d~~~~~~l~~Ll~~l 233 (502)
T PRK14326 159 AWVSI-SVGCNNTCTFCIVPSLRG----KEKDRRPGDILAEVQALVDEGVLEVTLLGQNVNAYGVSFGDRGAFSKLLRAC 233 (502)
T ss_pred EEEEE-ccCCCCCCccCceeccCC----CcccCCHHHHHHHHHHHHHCCCceEEEEeecccccccCCCCHHHHHHHHHHH
Confidence 56777 999999999999876433 23557999999999999999999999987644211 01234566666666
Q ss_pred Hhc-C---cEeE-EecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceeee
Q psy8199 760 KKI-G---LETC-LTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICCG 829 (965)
Q Consensus 760 ~~~-~---~~i~-~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~ 829 (965)
.+. + +.+. .++..++++.++.|+++| +.++++++|| ++++++.|+++++.+++.++++.+++. |+.+.++
T Consensus 234 ~~i~~l~~ir~~~~~p~~~~~ell~~m~~~g~~~~~l~lglQSgsd~iLk~m~R~~t~~~~~~~v~~lr~~~~~i~i~~~ 313 (502)
T PRK14326 234 GEIDGLERVRFTSPHPAEFTDDVIEAMAETPNVCPQLHMPLQSGSDRVLRAMRRSYRSERFLGILEKVRAAMPDAAITTD 313 (502)
T ss_pred HhcCCccEEEEeccChhhCCHHHHHHHHhcCCcCCcEEeccCCCCHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 542 3 2332 245667999999999998 8999999999 999999999999999999999999996 7889999
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS 875 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~ 875 (965)
+|+|+ |||.+|+.++++++.+++ ++.+.++.|.|.||||+++.+
T Consensus 314 ~IvGfPgET~edf~~Tl~~i~~~~--~~~~~~f~~sp~pGT~~~~~~ 358 (502)
T PRK14326 314 IIVGFPGETEEDFQATLDVVREAR--FSSAFTFQYSKRPGTPAAEME 358 (502)
T ss_pred EEEECCCCCHHHHHHHHHHHHHcC--CCEEEEEeecCCCCChHHhCc
Confidence 99999 799999999999999999 888888899999999999764
No 216
>PLN02187 rooty/superroot1
Probab=99.82 E-value=2.6e-18 Score=197.62 Aligned_cols=350 Identities=11% Similarity=0.035 Sum_probs=210.6
Q ss_pred ecCCcccccccccchhccCC--CCCHHHHHHHHHHHhhcc--ccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCCh
Q psy8199 250 TFSGKRYLDAISSWWVNLFG--HSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDG 323 (965)
Q Consensus 250 d~dG~~ylD~~~~~~~~~lG--h~~p~v~~av~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sG 323 (965)
..+++.++++..|.. ..+. -.++++.+++.+.+.... .|....+..+.+..+++.+.+..+ .+.++|++|+|+
T Consensus 62 ~~~~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~ 140 (462)
T PLN02187 62 KDVNKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGC 140 (462)
T ss_pred cCCCCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCH
Confidence 345677888776632 1111 135678899888776532 222233344556666666655433 356799999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCC-CCCCCCCCChhH
Q psy8199 324 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANE 402 (965)
Q Consensus 324 seA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 402 (965)
++|+..++....+ +++.|++.+++|.++...+...+. .+..++... ....
T Consensus 141 ~~al~~~~~~l~~--------pGd~Vlv~~P~y~~y~~~~~~~g~-------------~~~~~~l~~~~~~~-------- 191 (462)
T PLN02187 141 NQGIEIVFESLAR--------PNANILLPRPGFPHYDARAAYSGL-------------EVRKFDLLPEKEWE-------- 191 (462)
T ss_pred HHHHHHHHHHhcC--------CCCEEEEeCCCCccHHHHHHHcCC-------------EEEEEeCccccCCc--------
Confidence 9999999987643 568899999999887433222221 223333321 1111
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-cccccC
Q psy8199 403 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAE 481 (965)
Q Consensus 403 ~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~ 481 (965)
.|+++|++++. ....+++++.| +|++|.+. +.+.+++|.++|++||+++|+||+|..|-..+..+ ....+.
T Consensus 192 ---~d~~~l~~~~~--~~~~~v~i~nP--~NPTG~v~-s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~ 263 (462)
T PLN02187 192 ---IDLEGIEAIAD--ENTVAMVVINP--NNPCGNVY-SHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFA 263 (462)
T ss_pred ---cCHHHHHHhcC--CCcEEEEEeCC--CCCCCCcc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhc
Confidence 36788887775 23456777777 89999776 78889999999999999999999999864334322 222221
Q ss_pred CCccee---eeccccCCCcccceeeeec--HHH---HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc---ccH
Q psy8199 482 IWPDFL---CLSKGITGGYLPLSLVMTT--DKI---YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNI 550 (965)
Q Consensus 482 ~~pDiv---t~sK~l~gG~~pig~v~~~--~~i---~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~---~~~ 550 (965)
-...++ +|||.++..++++|+++++ +.+ ++.+..- .. ....+.+.+.++++++.++|+.-.+ +..
T Consensus 264 ~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~---~~-~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~ 339 (462)
T PLN02187 264 SIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSI---KQ-NLDVTPDPATIIQAALPAILEKADKNFFAKK 339 (462)
T ss_pred cCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHH---HH-hccccCCCCHHHHHHHHHHHhcCcHHHHHHH
Confidence 112244 5899854433999999983 222 2233220 00 1112223478899999888853111 123
Q ss_pred HHHHHHHHHHHHHHHHcccCCCcee-eeece-eEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-----CEEEE
Q psy8199 551 LQRISQDMKKITKALTSLITHPKII-NFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-----NTVYL 623 (965)
Q Consensus 551 ~~~~~~~~~~l~~~L~~l~~~~~i~-~v~g~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~lR~ 623 (965)
.+.++++.+.+.+.|+++ +.+. ...+. |+++++.+............+.+.+.+.++||.+.|+. +++|+
T Consensus 340 ~~~l~~~r~~l~~~L~~~---~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRi 416 (462)
T PLN02187 340 NKILKHNVDLVCDRLKDI---PCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRI 416 (462)
T ss_pred HHHHHHHHHHHHHHHhhC---CCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEE
Confidence 444555566666666543 4332 22344 45666555310000000112223455678999999852 78999
Q ss_pred eCCcccCHHHHHHHHHhhhcccc
Q psy8199 624 MPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 624 ~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
+ +...++.+++.++++.+.+.
T Consensus 417 s--~~~~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 417 T--IGVEAHMLEDALERLKGFCT 437 (462)
T ss_pred E--eCCCHHHHHHHHHHHHHHHH
Confidence 9 66778889999988876543
No 217
>PLN02656 tyrosine transaminase
Probab=99.82 E-value=7.3e-18 Score=192.34 Aligned_cols=345 Identities=17% Similarity=0.110 Sum_probs=213.9
Q ss_pred cCCcccccccccchhccC-CCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhH
Q psy8199 251 FSGKRYLDAISSWWVNLF-GHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGAS 325 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~l-Gh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGse 325 (965)
..|+.++++..|...... -..++.+.+++.+.+... ..|....+..+.+..+++.+....+ ...++|++++|+++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 367899999877543221 335788999998887652 2333334455666777777765543 34579999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCC-CCCCCCCCCChhHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIA 404 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 404 (965)
|+..++.+... ++++|++.+++|.++.......+ ..+..+|.. .....
T Consensus 108 al~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~i~~~~~~~~~---------- 156 (409)
T PLN02656 108 AIDVALSMLAR--------PGANILLPRPGFPIYELCAAFRH-------------LEVRYVDLLPEKGWE---------- 156 (409)
T ss_pred HHHHHHHHHhC--------CCCeEEEeCCCCCcHHHHHHHcC-------------CEEEEEeCCCcCCCC----------
Confidence 99999887643 56789999999976632222211 123333331 11111
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-cccccCCC
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIW 483 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~~~ 483 (965)
.|++++++++.+ ...+++++.| +|++|.+. +.+.+++|.++|++||+++|+||+|.+|-..+..+ ....++-.
T Consensus 157 -~d~~~l~~~~~~--~~~~v~l~~P--~NPtG~~~-s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 230 (409)
T PLN02656 157 -VDLDAVEALADQ--NTVALVIINP--GNPCGNVY-SYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSI 230 (409)
T ss_pred -CCHHHHHHHhcc--CceEEEEECC--CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhccc
Confidence 267788877752 3455666666 88999876 67779999999999999999999999875444321 11112212
Q ss_pred ccee---eeccccCCCcccceeeeec--------HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc---cc
Q psy8199 484 PDFL---CLSKGITGGYLPLSLVMTT--------DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DN 549 (965)
Q Consensus 484 pDiv---t~sK~l~gG~~pig~v~~~--------~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~---~~ 549 (965)
..++ +|||.++..++++|+++++ +++++.+.. .. ....+.++++++++.++|+...+ ..
T Consensus 231 ~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~------~~-~~~~~~s~~~q~a~~~~l~~~~~~~~~~ 303 (409)
T PLN02656 231 VPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKK------YF-DILGGPATFIQAAVPTILEQTDESFFKK 303 (409)
T ss_pred CcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHH------HH-hhhcCCCHHHHHHHHHHHhcCcHHHHHH
Confidence 2233 6899744433899999984 577777654 11 11224578899999888863111 12
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCcee-eeecee-EEEEEEEeecCccch-hhHHHHHHHHHHHcCcEEeecC-----CEE
Q psy8199 550 ILQRISQDMKKITKALTSLITHPKII-NFRQKG-MIWAFDVIIEDPEQI-ETFSKKFFVAALKNELLLRPIG-----NTV 621 (965)
Q Consensus 550 ~~~~~~~~~~~l~~~L~~l~~~~~i~-~v~g~G-~~~~i~~~~~~~~~~-~~~~~~~~~~l~~~Gi~~~~~~-----~~l 621 (965)
..+.++++.+.+.+.|+.+ +.+. ..++.| +++++.+. ...... ......+.+.+.++||.+.|+. +++
T Consensus 304 ~~~~~~~~r~~~~~~L~~~---~~~~~~~~p~gg~~~w~~l~-~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~i 379 (409)
T PLN02656 304 TINILKQSSDICCDRIKEI---PCITCPHKPEGSMAVMVKLN-LSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWL 379 (409)
T ss_pred HHHHHHHHHHHHHHHHhhC---CCCcCCcCCCeEEEEEEecc-hhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeE
Confidence 3344555555565655543 3332 234555 45555543 100000 0111224467788999999852 689
Q ss_pred EEeCCcccCHHHHHHHHHhhhccc
Q psy8199 622 YLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 622 R~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
|++ +..+++++++.++++.+.+
T Consensus 380 Ri~--~~~~~e~l~eal~rl~~~~ 401 (409)
T PLN02656 380 RIT--FAADPSSLEEALGRIKSFY 401 (409)
T ss_pred EEE--eCCCHHHHHHHHHHHHHHH
Confidence 999 5568888998888887543
No 218
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.82 E-value=5.8e-18 Score=193.01 Aligned_cols=348 Identities=12% Similarity=0.050 Sum_probs=215.6
Q ss_pred EEecCCcccccccccchhccCCC--CCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcC
Q psy8199 248 LITFSGKRYLDAISSWWVNLFGH--SNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGS 321 (965)
Q Consensus 248 ~~d~dG~~ylD~~~~~~~~~lGh--~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ 321 (965)
+-..+|+..|++..|... .+|+ .+|.+.+++.+.++.. .+|....+..+.+..+++.+.+..+ ...++|++|+
T Consensus 26 ~~~~~~~~~i~l~~G~p~-~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~ 104 (409)
T PLN00143 26 FNEDDHRLAISFGFGDPS-CFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTL 104 (409)
T ss_pred cccCCCCceeeCCCCCCC-CCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEec
Confidence 445667889998877442 2221 5778889998887653 3343445566777778877766543 3567999999
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChh
Q psy8199 322 DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN 401 (965)
Q Consensus 322 sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (965)
|+++|+..+++.... +++.|++.+++|+++.......+. ....++.....+..
T Consensus 105 G~~~al~~~~~~l~~--------~gd~v~v~~P~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~------ 157 (409)
T PLN00143 105 GCKHAAEIIIKVLAR--------PEANILLPRPGFPDVETYAIFHHL-------------EIRHFDLLPEKGWE------ 157 (409)
T ss_pred ChHHHHHHHHHHHcC--------CCCEEEEcCCCCcCHHHHHHHcCC-------------EEEEEeccCCCCCc------
Confidence 999999999987643 568899999999887433332221 22223321100100
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-cccccc
Q psy8199 402 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHA 480 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~ 480 (965)
.|+++|++++. ....+.++++| +|++|.+. +.+.+++|.++|++|++++|+||+|..|...+.. .....+
T Consensus 158 ----~d~~~l~~~~~--~~~~~~~~~nP--~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~ 228 (409)
T PLN00143 158 ----VDLDAVEAIAD--ENTIAMVIINP--GNPCGSVY-SYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLF 228 (409)
T ss_pred ----CCHHHHHHhcc--cCCEEEEEECC--CCCCCCcc-CHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhh
Confidence 26788888775 23456777777 89999876 7778999999999999999999999987544432 122222
Q ss_pred CCCccee---eeccccCCCcccceeeeec--HHH------HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--
Q psy8199 481 EIWPDFL---CLSKGITGGYLPLSLVMTT--DKI------YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-- 547 (965)
Q Consensus 481 ~~~pDiv---t~sK~l~gG~~pig~v~~~--~~i------~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-- 547 (965)
.-.+.++ +|||.++..++++|+++++ +.+ ++.+.. .....++ .+.++++++.++|+.-.+
T Consensus 229 ~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~------~~~~~~~-~~~~~q~a~~~~l~~~~~~~ 301 (409)
T PLN00143 229 ASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKK------ALNPAPF-PPTFIQAAIPEILEKTTEDF 301 (409)
T ss_pred cccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHH------HHhccCC-CCchHHHHHHHHHhcChHHH
Confidence 2222344 6899854433899999983 333 232322 1111223 477888888888752101
Q ss_pred -ccHHHHHHHHHHHHHHHHHcccCCCceee-eece-eEEEEEEEeecCccchhhHHHHHH-HHHHHcCcEEeecC-----
Q psy8199 548 -DNILQRISQDMKKITKALTSLITHPKIIN-FRQK-GMIWAFDVIIEDPEQIETFSKKFF-VAALKNELLLRPIG----- 618 (965)
Q Consensus 548 -~~~~~~~~~~~~~l~~~L~~l~~~~~i~~-v~g~-G~~~~i~~~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~~----- 618 (965)
+...+.+++..+++.+.|+++ +.... .++. |+++++.+. ............+. +.+.++||.+.|+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~L~~~---~~~~~~~~p~gg~f~w~~l~-~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 377 (409)
T PLN00143 302 FSKTINILRAALAFCYDKLKEI---PCIMCPQKAEGAFFALVKLN-LLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLK 377 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCCCeeEEEEEecc-hhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCC
Confidence 223455555555566655543 32221 2333 556666653 10000000122343 45578999999853
Q ss_pred CEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 619 NTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 619 ~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+++|++ +..+++++++.++++.+.+
T Consensus 378 ~~iRi~--~~~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 378 NWLRIT--FAVEQSSLEDGLGRLKSFC 402 (409)
T ss_pred CeEEEE--EcCCHHHHHHHHHHHHHHH
Confidence 689999 5677889999998887654
No 219
>PRK08363 alanine aminotransferase; Validated
Probab=99.82 E-value=5.4e-18 Score=193.22 Aligned_cols=345 Identities=14% Similarity=0.066 Sum_probs=213.5
Q ss_pred CCcccccccccchhc-cCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHH
Q psy8199 252 SGKRYLDAISSWWVN-LFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 327 (965)
Q Consensus 252 dG~~ylD~~~~~~~~-~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~ 327 (965)
+|+.++|+..|.... .++ .++.+.+++.+.+... ..|....+..+.++.+++.+.+..+ .+.+++++++|+++|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 106 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEAL 106 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 467899998886532 444 4788999998877543 2233334455666667766665443 3567999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEe-cCCCCCCCCCCCChhHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYII-TTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 406 (965)
..++.... .+++.|++.+++|.++...+...+. ....+ +....... .
T Consensus 107 ~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~v~~~~~~~~~~~-----------~ 154 (398)
T PRK08363 107 QLIFGALL--------DPGDEILIPGPSYPPYTGLVKFYGG-------------VPVEYRTIEEEGWQ-----------P 154 (398)
T ss_pred HHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHcCC-------------EEEEeccccccCCc-----------C
Confidence 99988663 3668899999999887433322222 11122 11111011 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcce
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 486 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDi 486 (965)
|++++++++.+ ...+.+++.| +|++|.+. +.+.+++|.++|++||+++|+||+|..+-..+.......+.-..++
T Consensus 155 d~~~l~~~~~~--~~~~v~l~~p--~NPtG~~~-~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~v 229 (398)
T PRK08363 155 DIDDIRKKITE--KTKAIAVINP--NNPTGALY-EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPV 229 (398)
T ss_pred CHHHHHhhCCc--ceEEEEEECC--CCCCCcCc-CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcE
Confidence 56777777642 2234445555 89999876 6777999999999999999999999876433332121112212234
Q ss_pred e---eeccccCCCcccceeeee--cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHH
Q psy8199 487 L---CLSKGITGGYLPLSLVMT--TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMK 559 (965)
Q Consensus 487 v---t~sK~l~gG~~pig~v~~--~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~ 559 (965)
+ +|||.++..++++|++++ ++++++.+... ... ....+++.+++++.++.++|+...+ .+..++++++.+
T Consensus 230 i~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~--~~~-~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~ 306 (398)
T PRK08363 230 IVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREA--IDK-LARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRD 306 (398)
T ss_pred EEEecchhccCCccceEEEEEEeCcHHHHHHHHHH--HHH-HhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 4 689985443389999987 66666554431 000 1112456788888888888852110 123455566666
Q ss_pred HHHHHHHcccCCCceeeeeceeEEEEE-EEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEEEeCCcccCH
Q psy8199 560 KITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNK 631 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~g~G~~~~i-~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~~p~~~~t~ 631 (965)
++.+.|+++ +++....+.|.|+.+ .+. .... ......+.+.|.++||.+.|+ .+++|++ +..++
T Consensus 307 ~l~~~L~~~---~~~~~~~p~g~~~~~~~l~-~~~~--~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis--~~~~~ 378 (398)
T PRK08363 307 YIYKRLNEI---PGISTTKPQGAFYIFPRIE-EGPW--KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLV--FLPPV 378 (398)
T ss_pred HHHHHHhcC---CCCEecCCCeEEEEEEEec-cCCC--CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEE--ecCCH
Confidence 666666543 455545667776665 443 1000 011222345567899999873 2589999 55678
Q ss_pred HHHHHHHHhhhccc
Q psy8199 632 NEIQHMTSAIFQTF 645 (965)
Q Consensus 632 ~~i~~~~~~l~~~~ 645 (965)
+++++.++++.+.+
T Consensus 379 ~~l~~~l~~l~~~~ 392 (398)
T PRK08363 379 EILEEAMDRFEEFM 392 (398)
T ss_pred HHHHHHHHHHHHHH
Confidence 88999888887543
No 220
>PRK09105 putative aminotransferase; Provisional
Probab=99.82 E-value=2.5e-18 Score=193.05 Aligned_cols=316 Identities=12% Similarity=0.001 Sum_probs=205.7
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 333 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~ 333 (965)
+.++|+..|. +++| .+|.+.+++.+.+....+ |+.....+|.+.+++.++.+.++|++++|+++++..++..
T Consensus 43 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~-----Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~ 114 (370)
T PRK09105 43 EGAVFLNANE--CPLG-PSPAARDAAARSAALSGR-----YDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLA 114 (370)
T ss_pred CCcEEecCCC--CCCC-CCHHHHHHHHHHHHHhcC-----CCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHH
Confidence 3455555542 3455 578999999887654322 3333467888888888887889999999999999999886
Q ss_pred HHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy8199 334 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 413 (965)
Q Consensus 334 a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 413 (965)
... ++++|++.+++|.++...+...+. .+..+|..... . .|++++++
T Consensus 115 l~~--------~gd~Vli~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~-~-----------~d~~~l~~ 161 (370)
T PRK09105 115 FTS--------PTAGLVTADPTYEAGWRAADAQGA-------------PVAKVPLRADG-A-----------HDVKAMLA 161 (370)
T ss_pred HcC--------CCCEEEEeCCChHHHHHHHHHcCC-------------eEEEecCCCCC-C-----------CCHHHHHh
Confidence 642 568899999999877433222221 23333332111 0 25666665
Q ss_pred HHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---eec
Q psy8199 414 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLS 490 (965)
Q Consensus 414 ~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~s 490 (965)
.. ......++++| +|++|.+. +.+.++++.+.|+ +|+++|+||+|..|+.. .......+..++++ +||
T Consensus 162 ~~---~~~~~v~l~nP--~NPTG~~~-~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~--~s~~~~~~~~~~vi~~~SfS 232 (370)
T PRK09105 162 AD---PNAGLIYICNP--NNPTGTVT-PRADIEWLLANKP-AGSVLLVDEAYIHFSDA--PSVVDLVAQRKDLIVLRTFS 232 (370)
T ss_pred cC---CCCCEEEEeCC--CCCCCcCc-CHHHHHHHHHhCC-CCcEEEEECchHHhccC--cchHHHHhhCCCEEEEeccc
Confidence 42 22334556666 89999876 6676888877754 59999999999877431 11122223345655 589
Q ss_pred cccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHccc
Q psy8199 491 KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSLI 569 (965)
Q Consensus 491 K~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~l~ 569 (965)
|.++..++++|++++++++++.+.. + ..+..+.+++.++.++|+... -+...++++++.+++.+.|+++
T Consensus 233 K~~g~~GlRiG~~v~~~~~i~~l~~------~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~- 302 (370)
T PRK09105 233 KLYGMAGMRLGLAAARPDLLAKLAR------F---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK- 302 (370)
T ss_pred HhhcCCccceeeeecCHHHHHHHHh------c---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 9886422899999999999988865 1 234467778888888875211 0123445556666666666553
Q ss_pred CCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee----cCCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 570 THPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----IGNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 570 ~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
++...++.|.|+.+.+. .+ ..++.+.|.++||.++. ..+++|++. .++++++.+++++..
T Consensus 303 ---g~~~~~~~~~f~~~~~~-~~-------~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~---~~~~~~~~l~~al~~ 366 (370)
T PRK09105 303 ---GYKCTPSQANCFMVDVK-RP-------AKAVADAMAKQGVFIGRSWPIWPNWVRVTV---GSEEEMAAFRSAFAK 366 (370)
T ss_pred ---CCCcCCCCCcEEEEeCC-CC-------HHHHHHHHHHCCcEEecCCCCCCCeEEEEc---CCHHHHHHHHHHHHH
Confidence 34445677887765542 11 34678888899999842 237899993 367788888877754
No 221
>PRK05904 coproporphyrinogen III oxidase; Provisional
Probab=99.82 E-value=5.3e-19 Score=194.23 Aligned_cols=212 Identities=11% Similarity=0.125 Sum_probs=165.1
Q ss_pred CCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCC-cccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHH
Q psy8199 675 DANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTE-ITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIE 753 (965)
Q Consensus 675 ~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~-~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~ 753 (965)
.+.++.++..| ..|+.+|.||.|.+..... ...+...-.+++..+++......++.+++.||. | ...+.+.+.
T Consensus 3 ~~~~~~lYiHi----PFC~~kC~yC~f~~~~~~~~~~~~~~~~~~~l~~ei~~~~~~~~~tiy~GGGT-P-s~L~~~~l~ 76 (353)
T PRK05904 3 NKKTKHLYIHI----PFCQYICTFCDFKRILKTPQTKKIFKDFLKNIKMHIKNFKIKQFKTIYLGGGT-P-NCLNDQLLD 76 (353)
T ss_pred CCCeeEEEEEe----CCccCcCCCCCCeeccCCcccHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCc-c-ccCCHHHHH
Confidence 35556655555 4599999999987642211 112222234555555544433457888887663 3 345667777
Q ss_pred HHHHHHHhc-----CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-e
Q psy8199 754 NMICEVKKI-----GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-I 826 (965)
Q Consensus 754 ~~~~~i~~~-----~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v 826 (965)
++++.+++. .+.+.+++..++++.++.|+++|++++++|+|| ++++++.+.+.++.++..++++.++++|+. +
T Consensus 77 ~ll~~i~~~~~~~~eitiE~nP~~lt~e~l~~lk~~G~nrisiGvQS~~d~vL~~l~R~~~~~~~~~ai~~lr~~G~~~v 156 (353)
T PRK05904 77 ILLSTIKPYVDNNCEFTIECNPELITQSQINLLKKNKVNRISLGVQSMNNNILKQLNRTHTIQDSKEAINLLHKNGIYNI 156 (353)
T ss_pred HHHHHHHHhcCCCCeEEEEeccCcCCHHHHHHHHHcCCCEEEEecccCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcE
Confidence 777777652 345666889999999999999999999999999 999999999999999999999999999996 9
Q ss_pred eeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHHHHHHHHHHHHHHCC
Q psy8199 827 CCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 827 ~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~~~~~~ia~~R~~lp 894 (965)
+..+|+|+ |||.+++.++++.+.+++ ++.+.++.+.|.|||++.+.. .++.++..++...++..+.
T Consensus 157 ~~dlI~GlPgqt~e~~~~tl~~~~~l~--p~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~L~ 224 (353)
T PRK05904 157 SCDFLYCLPILKLKDLDEVFNFILKHK--INHISFYSLEIKEGSILKKYHYTIDEDKEAEQLNYIKAKFN 224 (353)
T ss_pred EEEEeecCCCCCHHHHHHHHHHHHhcC--CCEEEEEeeEecCCChHhhcCCCCChHHHHHHHHHHHHHHH
Confidence 99999999 699999999999999999 999999999999999998753 2466666777777776663
No 222
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.81 E-value=5.1e-18 Score=193.52 Aligned_cols=341 Identities=14% Similarity=0.105 Sum_probs=212.5
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEV 329 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~ 329 (965)
+...+|+.+|... ++ .+|++.+++.+.+... ..|....+....+..+++.+.+..+ ...+++++++|+++|+..
T Consensus 30 ~~~~~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 106 (393)
T PRK05764 30 GRDVISLGAGEPD--FD-TPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYN 106 (393)
T ss_pred cCCEEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHH
Confidence 4567888887643 32 5789999998877642 2232233345556666666655443 345689999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
++..+.. +++.|++.+++|.++...+...+. ....+|........ .|++
T Consensus 107 ~~~~~~~--------~gd~vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~----------~d~~ 155 (393)
T PRK05764 107 AFMALLD--------PGDEVIIPAPYWVSYPEMVKLAGG-------------VPVFVPTGEENGFK----------LTVE 155 (393)
T ss_pred HHHHhcC--------CCCEEEecCCCCcchHHHHHHcCC-------------EEEEEecCcccCCc----------CCHH
Confidence 8887643 567899999998776333222211 22333332110000 2578
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccc--cCCCcce
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEH--AEIWPDF 486 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~--~~~~pDi 486 (965)
++++.+.. ...+++++.| +|++|.+. +.+.+++|.++|++||+++|+||+|..+...|.. ..... .+..+.+
T Consensus 156 ~l~~~l~~--~~~~v~~~~p--~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 230 (393)
T PRK05764 156 QLEAAITP--KTKALILNSP--SNPTGAVY-SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRT 230 (393)
T ss_pred HHHHhhCc--cceEEEEECC--CCCCCccc-CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCE
Confidence 88887742 2223444555 88888776 6677999999999999999999999876433321 11111 1222223
Q ss_pred e---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHH
Q psy8199 487 L---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKK 560 (965)
Q Consensus 487 v---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~ 560 (965)
+ +|||.++ .| +++|++++++++++.+.. .....+.+.+++++.++.+.|+...+ +.+.+..+++.+.
T Consensus 231 i~~~s~SK~~~~~G-~RiG~i~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK05764 231 ITVNGFSKAYAMTG-WRLGYAAGPKELIKAMSK------LQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDL 303 (393)
T ss_pred EEEecCcccccCcc-ceeEEEecCHHHHHHHHH------HHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 3 5899887 45 799999999999888765 12223456788898888888852110 1234444445555
Q ss_pred HHHHHHcccCCCceeeeeceeEE-EEEEEeecCccchhhHHHHHHHHHH-HcCcEEeecC-----CEEEEeCCcccCHHH
Q psy8199 561 ITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPIG-----NTVYLMPPYILNKNE 633 (965)
Q Consensus 561 l~~~L~~l~~~~~i~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~-----~~lR~~p~~~~t~~~ 633 (965)
+.+.|++ ++++....+.|.+ +++.+. .........+.++.+.+. ++||.+.++. +++|++ +..++++
T Consensus 304 l~~~L~~---~~g~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~~~~~ 377 (393)
T PRK05764 304 MVDGLNE---IPGLECPKPEGAFYVFPNVS-KLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YATSLED 377 (393)
T ss_pred HHHHHhh---CCCCcccCCCcceEEEEecc-cccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE--ecCCHHH
Confidence 6665554 3455555566654 444443 110000001245666665 6799998742 689999 6678999
Q ss_pred HHHHHHhhhccc
Q psy8199 634 IQHMTSAIFQTF 645 (965)
Q Consensus 634 i~~~~~~l~~~~ 645 (965)
++++++++.+.+
T Consensus 378 ~~~~i~~l~~~~ 389 (393)
T PRK05764 378 LEEGLERIERFL 389 (393)
T ss_pred HHHHHHHHHHHH
Confidence 999999887644
No 223
>PRK08912 hypothetical protein; Provisional
Probab=99.81 E-value=5.5e-18 Score=192.56 Aligned_cols=335 Identities=10% Similarity=0.064 Sum_probs=212.1
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhh-ccccccCCCCcHHHHHHHHHHHhhcC--CCCC-eEEEcCChhHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNK-LEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEV 329 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~-~v~~~~sGseA~~~ 329 (965)
...+|+..|... ++ .+|++.+++.+.+.. ...|....+..+.+..+++.+.+..+ .+.+ ++++|+|+++|+..
T Consensus 26 ~~~i~l~~g~p~--~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 102 (387)
T PRK08912 26 HGAINLGQGFPD--DP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAA 102 (387)
T ss_pred CCeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHH
Confidence 467888887643 33 368888888877654 23344344456677778877776544 3455 89999999999988
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
++..... +++.|++.+++|.++.......+ ..+..+|.+..... .|++
T Consensus 103 ~~~~~~~--------~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~-----------~~~~ 150 (387)
T PRK08912 103 ALLALVE--------PGDEVVLFQPLYDAYLPLIRRAG-------------GVPRLVRLEPPHWR-----------LPRA 150 (387)
T ss_pred HHHHhcC--------CCCEEEEeCCCchhhHHHHHHcC-------------CEEEEEecCcccCc-----------CCHH
Confidence 8876532 56789999999977643222211 12333443211111 2567
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-cc-ccccCCCccee
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FA-CEHAEIWPDFL 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~-~~~~~~~pDiv 487 (965)
++++.+.. ...+.+++.| +|++|.+. +.+.+++|.++|++|++++|+||+|..+-..+.. -. ....+....++
T Consensus 151 ~l~~~~~~--~~~~v~l~~p--~NPtG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i 225 (387)
T PRK08912 151 ALAAAFSP--RTKAVLLNNP--LNPAGKVF-PREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTV 225 (387)
T ss_pred HHHHHhCc--cceEEEEeCC--CCCcCccc-CHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceE
Confidence 88877752 2234445545 99999776 6777999999999999999999999766333321 11 11122222222
Q ss_pred ---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHH
Q psy8199 488 ---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKI 561 (965)
Q Consensus 488 ---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l 561 (965)
+|||.++ .| +++|++++++++++.+.. .....+++.++..++++.++|....+ +++.++++++.+++
T Consensus 226 ~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l 298 (387)
T PRK08912 226 KIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAK------AHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRL 298 (387)
T ss_pred EEeechhhccCcC-ceeEEEecCHHHHHHHHH------HHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 6899887 56 899999999999888765 12223466677777777777742111 23455666666677
Q ss_pred HHHHHcccCCCceeeeeceeE-EEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec---------CCEEEEeCCcccC
Q psy8199 562 TKALTSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI---------GNTVYLMPPYILN 630 (965)
Q Consensus 562 ~~~L~~l~~~~~i~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~---------~~~lR~~p~~~~t 630 (965)
.+.|++. ++....+.|. ++++.+. ..+. ......+++.+. ++||.+.|+ .+++|++ +...
T Consensus 299 ~~~L~~~----g~~~~~~~g~~~l~~~l~-~~~~--~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~--~~~~ 369 (387)
T PRK08912 299 AAGLRRI----GFPVLPSQGTYFLTVDLA-PLGL--AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFC--FAKR 369 (387)
T ss_pred HHHHHhC----CCcccCCCcceEEEeccc-ccCC--CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEE--EeCC
Confidence 7766654 3444455555 4445553 1000 011345667765 679999873 2689999 5567
Q ss_pred HHHHHHHHHhhhcc
Q psy8199 631 KNEIQHMTSAIFQT 644 (965)
Q Consensus 631 ~~~i~~~~~~l~~~ 644 (965)
++.+++.++++.+.
T Consensus 370 ~~~l~~~l~rl~~~ 383 (387)
T PRK08912 370 DATLDEAVERLAAA 383 (387)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888887654
No 224
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=2.8e-18 Score=193.57 Aligned_cols=318 Identities=12% Similarity=0.105 Sum_probs=205.3
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al 331 (965)
.+..++|+..|. +++| .+|.+.+++.+. .... .|+.....+|.+.+++.++.+.++|++++|+++++..++
T Consensus 50 ~~~~~i~l~~n~--~p~~-~~~~v~~a~~~~-~~~~-----~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~ 120 (380)
T PLN03026 50 KPEDIVKLDANE--NPYG-PPPEVLEALGNM-KFPY-----VYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLM 120 (380)
T ss_pred CccceEEccCCC--CCCC-CCHHHHHHHHhh-Hhhc-----cCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHH
Confidence 356788887763 4555 568888887642 2211 233334567888888888777789999999999999988
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
+.... ++++|++.+++|..+...+...+. .+..+|..... . .|+++|
T Consensus 121 ~~~~~--------~gd~Vlv~~P~y~~y~~~~~~~g~-------------~~~~v~~~~~~-~-----------~d~~~l 167 (380)
T PLN03026 121 RCVLD--------PGDKIIDCPPTFGMYVFDAAVNGA-------------EVIKVPRTPDF-S-----------LDVPRI 167 (380)
T ss_pred HHhcC--------CCCEEEEcCCChHHHHHHHHHcCC-------------EEEEeecCCCC-C-----------cCHHHH
Confidence 76532 567899999999765322222111 22333332111 1 367888
Q ss_pred HHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---e
Q psy8199 412 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---C 488 (965)
Q Consensus 412 e~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t 488 (965)
++++.. .++.+|++.. ++|++|.+.+ .+++.++++.. +++|+||+|..|...+... ....-.++++ +
T Consensus 168 ~~~~~~--~~~~~v~l~~-P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~--~~~~~~~~viv~~S 237 (380)
T PLN03026 168 VEAVET--HKPKLLFLTS-PNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRM--KWVKKYDNLIVLRT 237 (380)
T ss_pred HHHHhc--cCCcEEEEeC-CCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchH--HHHHhCCCEEEEec
Confidence 887732 2345555555 5999999886 45556666544 8999999998774322211 1111224444 6
Q ss_pred eccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHH
Q psy8199 489 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALT 566 (965)
Q Consensus 489 ~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~ 566 (965)
|||.++ .| +++|++++++++++.+.. ....++.+.+++.++.++|+..+ -++..+.+++..+++.+.|+
T Consensus 238 fSK~~glaG-lRiGy~~~~~~~i~~l~~--------~~~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~ 308 (380)
T PLN03026 238 FSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLK 308 (380)
T ss_pred chHhhcCcc-ccceeeecCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899886 45 899999999999988765 11245678888999888884211 02245556666677777776
Q ss_pred cccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----CCEEEEeCCcccCHHHHHHHHHhh
Q psy8199 567 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 567 ~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
++ +.+...++.|.|+.+.+. +. ....++.+.|.++||.++++ .+++||+ ..+.++.+.+.+++
T Consensus 309 ~~---~~~~~~p~~~~f~~~~~~--~~----~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis---~~~~~~~~~l~~al 376 (380)
T PLN03026 309 EV---PFLEPYPSDANFILCRVT--SG----RDAKKLKEDLAKMGVMVRHYNSKELKGYIRVS---VGKPEHTDALMEAL 376 (380)
T ss_pred HC---CCCeECCCCCeEEEEECC--CC----CCHHHHHHHHHHCCeEEEECCCCCCCCEEEEe---cCCHHHHHHHHHHH
Confidence 54 333334556777777653 11 11346788888999999874 2689999 33677788887776
Q ss_pred h
Q psy8199 642 F 642 (965)
Q Consensus 642 ~ 642 (965)
+
T Consensus 377 ~ 377 (380)
T PLN03026 377 K 377 (380)
T ss_pred H
Confidence 5
No 225
>KOG0257|consensus
Probab=99.81 E-value=6.8e-19 Score=185.00 Aligned_cols=275 Identities=14% Similarity=0.181 Sum_probs=191.1
Q ss_pred CHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcCC---CCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCc
Q psy8199 272 NSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQY---KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNK 346 (965)
Q Consensus 272 ~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~---~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~ 346 (965)
+.-|.+|+++.+... ..|+...+..++...|++++++.++. ..++|+.|+|+.+|+..++..... .+
T Consensus 46 P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~--------~G 117 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN--------PG 117 (420)
T ss_pred cHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC--------CC
Confidence 344788888888763 34555667778888999999996653 345899999999999999887764 68
Q ss_pred eEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEE
Q psy8199 347 KKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAII 426 (965)
Q Consensus 347 ~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii 426 (965)
+.||+++|.|..|......+++.+.+. |.... ++.....+-..|.++||.++. +++.+|+
T Consensus 118 DeVii~eP~fd~Y~~~~~maG~tpv~v-------------~~~~~----~g~~~s~~~~~D~~~le~~~t---~kTk~Ii 177 (420)
T KOG0257|consen 118 DEVIVFEPFFDCYIPQVVMAGGTPVFV-------------PLKPK----EGNVSSSDWTLDPEELESKIT---EKTKAII 177 (420)
T ss_pred CEEEEecCcchhhhhHHhhcCCcceee-------------ccccc----cccccCccccCChHHHHhhcc---CCccEEE
Confidence 999999999999988777777644322 21100 000000111257899999986 3455555
Q ss_pred EccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-cccccc-cCCCccee---eecc--ccCCCccc
Q psy8199 427 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEH-AEIWPDFL---CLSK--GITGGYLP 499 (965)
Q Consensus 427 ~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~-~~~~pDiv---t~sK--~l~gG~~p 499 (965)
++. ++|++|.+. +.+.|++|.++|++||+++|+||||..+-..|. +..+.. -|+.-..+ ++|| +++| |+
T Consensus 178 ~nt-PhNPtGkvf-sReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TG--Wr 253 (420)
T KOG0257|consen 178 LNT-PHNPTGKVF-SREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTG--WR 253 (420)
T ss_pred EeC-CCCCcCccc-CHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeee--ee
Confidence 555 599999876 788899999999999999999999997766664 222222 23332333 5789 4556 99
Q ss_pred ceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh---c-------ccHHHHHHHHHHHHHHHHHccc
Q psy8199 500 LSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN---K-------DNILQRISQDMKKITKALTSLI 569 (965)
Q Consensus 500 ig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~---~-------~~~~~~~~~~~~~l~~~L~~l~ 569 (965)
+|++++++.++..... ......|..+...+.|..+++..-. + .++...++++++.|.+.|.++
T Consensus 254 lGW~igp~~L~~~~~~------vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l- 326 (420)
T KOG0257|consen 254 LGWAIGPKHLYSALFP------VHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL- 326 (420)
T ss_pred eeeeechHHhhhhHHH------HhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999998888876654 3344556666666666666664322 1 125667788888999999887
Q ss_pred CCCceeeeeceeEEEEEEE
Q psy8199 570 THPKIINFRQKGMIWAFDV 588 (965)
Q Consensus 570 ~~~~i~~v~g~G~~~~i~~ 588 (965)
++...-++|.++.+..
T Consensus 327 ---g~~v~~p~gayyl~ad 342 (420)
T KOG0257|consen 327 ---GLKVTGPEGAYYLWAD 342 (420)
T ss_pred ---CCccccCCCceEEEEe
Confidence 5556667787766654
No 226
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.81 E-value=3.5e-18 Score=196.66 Aligned_cols=328 Identities=13% Similarity=0.020 Sum_probs=208.4
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 333 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~ 333 (965)
...+|+.+|.. ..-..|.+.+++.+.......|....+..+....+++.+....+ ..++|++|+|+++|+..+++.
T Consensus 85 ~~~i~L~~g~p---~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~~~~ 160 (431)
T PRK15481 85 TPLHDLAGGNP---DPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERLLCA 160 (431)
T ss_pred chhhhhhcCCC---ChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHHHHH
Confidence 34667665522 22124667777776554433343333444555555555544332 245899999999999999987
Q ss_pred HHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy8199 334 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 413 (965)
Q Consensus 334 a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 413 (965)
... +++.|++.+++|.++...+...+. .+..+|.... + .|+++|++
T Consensus 161 l~~--------pgd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~-g------------~~~~~l~~ 206 (431)
T PRK15481 161 HLL--------PGDSVAVEDPCFLSSINMLRYAGF-------------SASPVSVDAE-G------------MQPEKLER 206 (431)
T ss_pred hCC--------CCCEEEEeCCCcHHHHHHHHHcCC-------------eEEeeccCCC-C------------CCHHHHHH
Confidence 643 568899999999888443333322 2333333211 1 25788888
Q ss_pred HHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhc-CCeEEEeccccCCCcccccccccccCCCccee---ee
Q psy8199 414 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY-NIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CL 489 (965)
Q Consensus 414 ~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~ 489 (965)
+++. ++.++++.|-.+|++|.+. +.+.+++|.++|++| ++++|.||+|..|...+...... ...+.++ +|
T Consensus 207 ~~~~---~~k~i~~~p~p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~--~~~~~vi~~~Sf 280 (431)
T PRK15481 207 ALAQ---GARAVILTPRAHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIP--QTTQRWALIRSV 280 (431)
T ss_pred HHhc---CCCEEEECCCCCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCc--CCCCCEEEEeee
Confidence 8853 3444444322499999877 778899999999999 99999999998774322111111 1224444 68
Q ss_pred ccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc----ccHHHHHHHHHHHHHHHH
Q psy8199 490 SKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK----DNILQRISQDMKKITKAL 565 (965)
Q Consensus 490 sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~----~~~~~~~~~~~~~l~~~L 565 (965)
||.++.| +++|++++++++++.+.. .....+++.+.+++.++.++|+.-.- ....+.++++.+.+.+.|
T Consensus 281 SK~~~~G-lRiG~~i~~~~~~~~~~~------~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L 353 (431)
T PRK15481 281 SKALGPD-LRLAFVASDSATSARLRL------RLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARAL 353 (431)
T ss_pred ccccCCC-ceeEEEeCCHHHHHHHHH------HHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999866 899999999999888754 11223455788999999888852110 123444555555566655
Q ss_pred HcccCCCceee-eeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC--------CEEEEeCCcccCHHHHHH
Q psy8199 566 TSLITHPKIIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--------NTVYLMPPYILNKNEIQH 636 (965)
Q Consensus 566 ~~l~~~~~i~~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--------~~lR~~p~~~~t~~~i~~ 636 (965)
++. ++.. .+..|+++++.+. + ....+.+.|.++||.+.|+. +++|++... .+++++++
T Consensus 354 ~~~----~~~~~~p~gg~f~~~~l~--~------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~ 420 (431)
T PRK15481 354 QQY----GIAIPSPGDGLNLWLPLD--T------DSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINR 420 (431)
T ss_pred HHc----CCccccCCCeEEEEEECC--C------CHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHH
Confidence 543 3333 3445666666653 1 13457778889999998731 479999542 56889999
Q ss_pred HHHhhhccc
Q psy8199 637 MTSAIFQTF 645 (965)
Q Consensus 637 ~~~~l~~~~ 645 (965)
+++++.+++
T Consensus 421 ~~~~l~~~~ 429 (431)
T PRK15481 421 LAADLHQAL 429 (431)
T ss_pred HHHHHHHHh
Confidence 998886653
No 227
>PRK14328 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.81 E-value=7.5e-19 Score=200.26 Aligned_cols=191 Identities=14% Similarity=0.184 Sum_probs=155.8
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCccc---HHHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRD---LDNIENMICEV 759 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~---~~~~~~~~~~i 759 (965)
..+.+ ++|||++|.||..+...+ +++.+++++|+++++.+.+.|++++.|++........+ ...+.++++.+
T Consensus 149 ~~i~i-~rGC~~~CsfC~~p~~~g----~~Rsr~~e~Iv~Ei~~l~~~G~~ei~l~~~~~~~yg~d~~~~~~l~~Ll~~l 223 (439)
T PRK14328 149 AFVTI-MYGCNNFCTYCIVPYVRG----RERSRKPEDIIAEIKELVSEGYKEVTLLGQNVNSYGKDLEEKIDFADLLRRV 223 (439)
T ss_pred EEEEH-HhCcCCCCCCCCcccccC----CcccCCHHHHHHHHHHHHHCCCcEEEEeccccCcCCcCCCCCcCHHHHHHHH
Confidence 45677 999999999999875432 23567999999999999999999999988754321111 12356666666
Q ss_pred Hh-cC---cEe-EEecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceeee
Q psy8199 760 KK-IG---LET-CLTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICCG 829 (965)
Q Consensus 760 ~~-~~---~~i-~~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~ 829 (965)
.+ .+ +.+ +.++..++++.++.|+++| +.++++++|| ++++++.|+++++.+++.++++.++++ ++.+.++
T Consensus 224 ~~~~~~~~ir~~~~~P~~i~~ell~~l~~~~~~~~~l~iglQSgsd~vLk~M~R~~~~~~~~~~i~~lr~~~~~i~i~~d 303 (439)
T PRK14328 224 NEIDGLERIRFMTSHPKDLSDDLIEAIADCDKVCEHIHLPVQSGSNRILKKMNRHYTREYYLELVEKIKSNIPDVAITTD 303 (439)
T ss_pred HhcCCCcEEEEecCChhhcCHHHHHHHHhCCCcCceeeeCCCcCCHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 54 22 333 2356678999999999996 9999999999 999999999999999999999999997 7788899
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHH
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPL 880 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~ 880 (965)
+|+|+ |||.+|+.++++++.+++ ++.+.++.|.|.||||++..+ ..+.+
T Consensus 304 ~IvG~PgET~ed~~~tl~~i~~l~--~~~~~~~~~sp~pGT~~~~~~~~v~~~ 354 (439)
T PRK14328 304 IIVGFPGETEEDFEETLDLVKEVR--YDSAFTFIYSKRKGTPAAKMEDQVPED 354 (439)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcC--CCcccceEecCCCCChhhhCCCCCCHH
Confidence 99999 799999999999999999 899999999999999999753 34543
No 228
>TIGR01574 miaB-methiolase tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB. Hits to this model span all major groups of bacteria and eukaryotes, but not archaea, which are known to lack this particular tRNA modification. The enzyme from Thermotoga maritima has been cloned, expressed, spectroscopically characterized and shown to complement the E. coli MiaB enzyme.
Probab=99.81 E-value=8.9e-19 Score=199.58 Aligned_cols=193 Identities=13% Similarity=0.154 Sum_probs=158.2
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCC-cc----cHHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELK-DR----DLDNIENMI 756 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~-~~----~~~~~~~~~ 756 (965)
.+.+.+ ++||+++|.||..+...+ +++.+++++|+++++.+.+.|++++.|++...... .. ....+.+++
T Consensus 146 ~~~v~i-~rGC~~~CsfC~~~~~~G----~~rsr~~e~I~~Ei~~l~~~g~~ei~l~~~~~~~y~g~d~~~~~~~l~~Ll 220 (438)
T TIGR01574 146 KSFINI-MIGCNKFCTYCIVPYTRG----DEISRPFDDILQEVQKLAEKGVREITLLGQNVNAYRGKDFEGKTMDFSDLL 220 (438)
T ss_pred eEEeeh-hcCCCCCCCCCCeeeecC----CCcccCHHHHHHHHHHHHHcCCeEEEEEecccCCccCCCCCCCcccHHHHH
Confidence 356777 899999999998765322 23557999999999999999999999987543221 11 123567777
Q ss_pred HHHHh-cCc-EeE---EecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCce
Q psy8199 757 CEVKK-IGL-ETC---LTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINI 826 (965)
Q Consensus 757 ~~i~~-~~~-~i~---~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v 826 (965)
+.+.+ .++ .+. .++..++++.++.|+++| +.++++++|| ++++++.|+++++.+++.++++.++++ |+.+
T Consensus 221 ~~l~~~~~~~~ir~~~~~p~~l~~ell~~l~~~g~~~~~l~iglQSgsd~vLk~m~R~~t~~~~~~~v~~ir~~~~~i~i 300 (438)
T TIGR01574 221 RELSTIDGIERIRFTSSHPLDFDDDLIEVFANNPKLCKSMHLPVQSGSSEILKLMKRGYTREWYLNLVRKLRAACPNVSI 300 (438)
T ss_pred HHHHhcCCceEEEEecCCcccCCHHHHHHHHhCCCccCceeeCCCcCCHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 77764 333 222 356678999999999999 9999999999 999999999999999999999999997 7888
Q ss_pred eeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCC-CCHHH
Q psy8199 827 CCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSI-LDPLE 881 (965)
Q Consensus 827 ~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~-~~~~~ 881 (965)
.+++|+|+ |||.+|+.++++++.+++ ++.+.++.|.|.||||+++.+. .+.+.
T Consensus 301 ~~d~IvG~PgEt~ed~~~tl~~i~~~~--~~~~~~~~~sp~pGT~~~~~~~~v~~~~ 355 (438)
T TIGR01574 301 STDIIVGFPGETEEDFEETLDLLREVE--FDSAFSFIYSPRPGTPAADMPDQIPEEI 355 (438)
T ss_pred eeCEEEeCCCCCHHHHHHHHHHHHhcC--CCeeeeEEecCCCCCchhhCCCCCCHHH
Confidence 99999999 799999999999999999 8999999999999999998653 34433
No 229
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.81 E-value=8.1e-18 Score=191.00 Aligned_cols=333 Identities=12% Similarity=0.030 Sum_probs=210.0
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcCC--CCC-eEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQY--KLG-HCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~--~~~-~v~~~~sGseA 326 (965)
.|...+|+.+|.. .++ .+|.+.+++.+.+... ..|....+..+.+..+++.+.+..+. ..+ +|++|+|+++|
T Consensus 27 ~~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 27 EGVDVISLGIGDP--DLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 4667888887743 345 3788899998876542 22333334456677777777765443 334 68999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..++++..+ +++.|++.+++|.++.......+. .+..+|.....+.. .
T Consensus 104 l~~~~~~~~~--------~gd~vlv~~P~y~~~~~~~~~~G~-------------~v~~v~~~~~~g~~----------~ 152 (383)
T TIGR03540 104 IAHIPLAFVN--------PGDIVLVPDPGYPVYRIGTLFAGG-------------EPYEMPLKEENGFL----------P 152 (383)
T ss_pred HHHHHHHhCC--------CCCEEEEeCCCCcchHHHHHhcCC-------------EEEEEecCcccCCc----------c
Confidence 9999887643 568899999999887443333222 23333332111100 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-ccccccc-CCC-
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHA-EIW- 483 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~-~~~- 483 (965)
|++++++.+.+ ++.+|++.. ++|++|.+. +.+.+++|.++|++||+++|+||+|..+...+. ......+ +..
T Consensus 153 d~~~l~~~~~~---~~~~v~i~~-P~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~ 227 (383)
T TIGR03540 153 DFDAIPEDIAK---KAKLMFINY-PNNPTGAVA-PLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKD 227 (383)
T ss_pred CHHHHHhhccc---cceEEEEeC-CCCCcCccC-CHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCccc
Confidence 67778777642 345555553 489999776 788899999999999999999999987643332 1111111 111
Q ss_pred --cceeeeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHH
Q psy8199 484 --PDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDM 558 (965)
Q Consensus 484 --pDivt~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~ 558 (965)
..+-+|||.++ .| +++|++++++++++.+.. +....+.+.+.+++.++.++|+...+ ++..+.++++.
T Consensus 228 ~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 300 (383)
T TIGR03540 228 VGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGK------VKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRR 300 (383)
T ss_pred CEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHH------HHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 22347999886 45 899999999999887764 11122334466778887777753210 12344555556
Q ss_pred HHHHHHHHcccCCCceeeeeceeEE-EEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCccc
Q psy8199 559 KKITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYIL 629 (965)
Q Consensus 559 ~~l~~~L~~l~~~~~i~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~ 629 (965)
+.+.+.|++. ++....+.|.+ +.+.+. +.. ....+.+.|+ ++||.+.|+ .+++||+ +..
T Consensus 301 ~~~~~~L~~~----~~~~~~~~~~~~~~~~l~--~~~----~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris--~~~ 368 (383)
T TIGR03540 301 DLLLEALKKI----GIDVEKPKATFYVWVPVP--EGY----TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRIS--LTV 368 (383)
T ss_pred HHHHHHHHhC----CCEecCCCcceEEEEECC--CCC----CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEE--ecC
Confidence 6666666543 34444555554 555553 211 1345777764 689999874 2589999 456
Q ss_pred CHHHHHHHHHhhh
Q psy8199 630 NKNEIQHMTSAIF 642 (965)
Q Consensus 630 t~~~i~~~~~~l~ 642 (965)
+++.+.+.++++.
T Consensus 369 ~~~~l~~~l~~l~ 381 (383)
T TIGR03540 369 PDERLEEAVARIK 381 (383)
T ss_pred CHHHHHHHHHHHh
Confidence 7777887777654
No 230
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.81 E-value=7.4e-18 Score=192.11 Aligned_cols=341 Identities=14% Similarity=0.087 Sum_probs=216.8
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcCC--CCCeEEEcCChhHHHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQY--KLGHCFYGSDGASAVE 328 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA~~ 328 (965)
.|...+|+..|.+. ++ .+|.+.+++.+.++.. ..|....+..+.+..+++.+.+.++. ..+++++++|+++|+.
T Consensus 31 ~~~~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 31 AGRSIVDLTVGEPD--FD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred ccCCEEEcCCCCCC--CC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 35677888777542 33 3788999998887642 23444456667888899988877654 4578999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.+++... .+++.|++.+++|.++........+ ....++.+...+.. .|+
T Consensus 108 ~~~~~~~--------~~gd~vl~~~p~y~~y~~~~~~~~~-------------~~~~v~~~~~~~~~----------~~~ 156 (402)
T PRK06107 108 LALMATL--------EAGDEVIIPAPYWVSYPDMVLANDG-------------TPVIVACPEEQGFK----------LTP 156 (402)
T ss_pred HHHHHhc--------CCCCEEEEecCCCcCHHHHHHHcCC-------------EEEEecCCcccCCC----------CCH
Confidence 9987543 2568899999988877433222211 12223322111100 256
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhc-CCeEEEeccccCCCccccccc-cccc--CCCc
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY-NIHLIADEIAVGCGRTGKFFA-CEHA--EIWP 484 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~~~~-~~~~--~~~p 484 (965)
+++++++.+ ...+++++.| +|++|.+. +.+.+++|.++|++| |+++|+||+|..+...+..+. .... +...
T Consensus 157 ~~l~~~~~~--~~~~v~l~~p--~NPtG~~~-s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~ 231 (402)
T PRK06107 157 EALEAAITP--RTRWLILNAP--SNPTGAVY-SRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRD 231 (402)
T ss_pred HHHHhhcCc--CceEEEEECC--CCCCCcCc-CHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccC
Confidence 778877742 2334445545 88999765 777899999999998 999999999987644342211 1111 2223
Q ss_pred cee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhccc----HHHHHHH
Q psy8199 485 DFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN----ILQRISQ 556 (965)
Q Consensus 485 Div---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~----~~~~~~~ 556 (965)
.++ +|||.++ .| +++|++++++++++.+.. +....+.+.+.++++++..+|+. .+. ..+.+++
T Consensus 232 ~vi~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~------~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~ 302 (402)
T PRK06107 232 RVLVTNGVSKTYAMTG-WRIGYAAGPADLIAAINK------LQSQSSSCPSSISQAAAAAALNG--DQSFVTESVAVYKQ 302 (402)
T ss_pred CEEEEeccchhhcCcc-cceeeeecCHHHHHHHHH------HHHhcccCCChHHHHHHHHHhcC--ChHHHHHHHHHHHH
Confidence 455 4699886 45 899999999999988765 22334566788999999888842 122 2344455
Q ss_pred HHHHHHHHHHcccCCCceeeeeceeEEE-EEEEeec-C---ccch-hhHHHHHHH-HHHHcCcEEeecC-----CEEEEe
Q psy8199 557 DMKKITKALTSLITHPKIINFRQKGMIW-AFDVIIE-D---PEQI-ETFSKKFFV-AALKNELLLRPIG-----NTVYLM 624 (965)
Q Consensus 557 ~~~~l~~~L~~l~~~~~i~~v~g~G~~~-~i~~~~~-~---~~~~-~~~~~~~~~-~l~~~Gi~~~~~~-----~~lR~~ 624 (965)
+.+.+.+.|++ ++++....+.|.|+ ++.+..- + .... ......+.. .+.++||.+.|+. +++|++
T Consensus 303 ~~~~~~~~L~~---~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis 379 (402)
T PRK06107 303 RRDYALALLNA---IPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLS 379 (402)
T ss_pred HHHHHHHHHhc---CCCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEE
Confidence 55555555544 34555455666654 4444100 0 0000 001234544 4467899999852 689999
Q ss_pred CCcccCHHHHHHHHHhhhccc
Q psy8199 625 PPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 625 p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+..+++++++.++++.+.+
T Consensus 380 --~~~~~e~l~~~l~~l~~~l 398 (402)
T PRK06107 380 --IATSLETLEEACARIERAV 398 (402)
T ss_pred --eCCCHHHHHHHHHHHHHHH
Confidence 5578999999998887544
No 231
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.81 E-value=7.6e-18 Score=191.33 Aligned_cols=334 Identities=10% Similarity=0.015 Sum_probs=207.5
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcCC--CCC-eEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQY--KLG-HCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~--~~~-~v~~~~sGseA 326 (965)
.|..++|+..|.. .++ .+|.+.+++.+.++.. ..|....+..+.+..+++.+.+..+. +.+ .+++|+|+++|
T Consensus 29 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~ 105 (385)
T PRK09276 29 RGVDVISLGIGDP--DLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEG 105 (385)
T ss_pred cCCCEEEecCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 3566788887743 333 4778999998877542 22332334456667777777655442 344 58899999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..+++.... +++.|++.+++|.++...+...+. .+..+|.....+.. .
T Consensus 106 i~~~~~~~~~--------~gd~Vl~~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~g~~----------~ 154 (385)
T PRK09276 106 IAHIPLAFVN--------PGDVVLVPDPGYPVYKIGTIFAGG-------------EPYFMPLKEENGFL----------P 154 (385)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCcChHHHHHHcCC-------------EEEEEecCCCCCCc----------C
Confidence 9999887643 568899999999887433322221 22333332111100 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-cc-cccC---
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-AC-EHAE--- 481 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~-~~~~--- 481 (965)
|++++++.+. .++.+|++.+ ++|++|.+. +.+.+++|.++|++||+++|+||+|..|...+... .. ...+
T Consensus 155 d~~~l~~~~~---~~~~~v~l~~-p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 229 (385)
T PRK09276 155 DLDAIPEDVA---KKAKLMFINY-PNNPTGAVA-DLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKD 229 (385)
T ss_pred CHHHHHHhcc---ccceEEEEeC-CCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcC
Confidence 5677776664 2345555554 489999876 77779999999999999999999998764333211 11 1111
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMK 559 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~ 559 (965)
....+-+|||.++..++++|++++++++++.+..- ....+.+.+++.+.++.++|+.... +...+.++++.+
T Consensus 230 ~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 303 (385)
T PRK09276 230 VGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKV------KSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRD 303 (385)
T ss_pred CEEEEecchhhcCCcchhheeeeCCHHHHHHHHHH------HhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 11233479998853228999999999998887651 1112233456777777777742111 223444555566
Q ss_pred HHHHHHHcccCCCceeeeeceeEE-EEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCcccC
Q psy8199 560 KITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILN 630 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~t 630 (965)
++.+.|++. ++....+.|.+ +.+.+. +.. ....+.+.|+ ++||.+.|+ .+++|++ +..+
T Consensus 304 ~l~~~L~~~----~~~~~~~~~~~~~~v~~~--~~~----~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris--~~~~ 371 (385)
T PRK09276 304 ILVEGLRKL----GLEVEPPKATFYVWAPVP--KGY----TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIA--LTVP 371 (385)
T ss_pred HHHHHHHhC----CCcccCCCcceEEEEECC--CCC----CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEE--eCCC
Confidence 666666553 34434455554 555543 211 1345667765 579999884 2589999 4567
Q ss_pred HHHHHHHHHhhh
Q psy8199 631 KNEIQHMTSAIF 642 (965)
Q Consensus 631 ~~~i~~~~~~l~ 642 (965)
++++.++++++.
T Consensus 372 ~~~l~~~l~~l~ 383 (385)
T PRK09276 372 DERIEEAVERIK 383 (385)
T ss_pred HHHHHHHHHHHh
Confidence 788888877764
No 232
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.81 E-value=3.9e-18 Score=191.71 Aligned_cols=323 Identities=14% Similarity=0.090 Sum_probs=208.8
Q ss_pred hccCCCCCHHHHHHHHHHHhh--ccccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHHHHHHHHHHHHh
Q psy8199 265 VNLFGHSNSYINKALKNQLNK--LEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYN 340 (965)
Q Consensus 265 ~~~lGh~~p~v~~av~~~~~~--~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Al~~a~~~~~~ 340 (965)
..++++ +|.+++++.+.-.. ...+....+..+....+++.+....+ .+.+.+++++||++|+..+++.+..
T Consensus 7 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~---- 81 (350)
T cd00609 7 EPDFPP-PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN---- 81 (350)
T ss_pred CCCCCC-CHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC----
Confidence 445554 45555555541111 11122233445555666666665542 2366899999999999999987743
Q ss_pred cCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC
Q psy8199 341 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHN 420 (965)
Q Consensus 341 ~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 420 (965)
.+++|++.+++|++........+ .....++........ .+.+.++... .+
T Consensus 82 ----~g~~vl~~~~~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~----------~~~~~~~~~~---~~ 131 (350)
T cd00609 82 ----PGDEVLVPDPTYPGYEAAARLAG-------------AEVVPVPLDEEGGFL----------LDLELLEAAK---TP 131 (350)
T ss_pred ----CCCEEEEcCCCchhHHHHHHHCC-------------CEEEEEecccccCCc----------cCHHHHHhhc---Cc
Confidence 46789999988877633222211 233344443211110 0013333332 45
Q ss_pred cEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccc-ccccC-CCccee--eeccccC-C
Q psy8199 421 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAE-IWPDFL--CLSKGIT-G 495 (965)
Q Consensus 421 ~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~-~~pDiv--t~sK~l~-g 495 (965)
++++|++++ +++++|.+. +.+.+++|.++|+++|+++|+||++++++..+.... ....+ ...|++ +++|.++ +
T Consensus 132 ~~~~v~i~~-~~~~tG~~~-~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~ 209 (350)
T cd00609 132 KTKLLYLNN-PNNPTGAVL-SEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLP 209 (350)
T ss_pred cceEEEEEC-CCCCCCccc-CHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCc
Confidence 788999999 899999865 678899999999999999999999998765554321 11111 122443 6899998 5
Q ss_pred CcccceeeeecH-HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH--hcccHHHHHHHHHHHHHHHHHcccCCC
Q psy8199 496 GYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF--NKDNILQRISQDMKKITKALTSLITHP 572 (965)
Q Consensus 496 G~~pig~v~~~~-~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~--~~~~~~~~~~~~~~~l~~~L~~l~~~~ 572 (965)
| .++|++++++ ++.+.+.. .....+++.++.++.++.++|+.. ..+...++++++.+++.+.|++..
T Consensus 210 g-~~~G~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--- 279 (350)
T cd00609 210 G-LRIGYLIAPPEELLERLKK------LLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELG--- 279 (350)
T ss_pred c-cceEEEecCHHHHHHHHHH------HHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 6 6999999998 78888765 223346677888888888888765 224456777778888888887652
Q ss_pred cee-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 573 KII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 573 ~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
... .....|.+..+.+. .. .....+.+.|.+.||.+.+. +.++|++++.. .++++.++++++
T Consensus 280 ~~~~~~~~~g~~~~~~~~--~~----~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 280 PLVVVKPSGGFFLWLDLP--EG----DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred CccccCCCccEEEEEecC--CC----ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 111 34455777777664 11 12334567777889998864 36899998877 899999998875
No 233
>TIGR01578 MiaB-like-B MiaB-like tRNA modifying enzyme, archaeal-type. This clade is a member of a subfamily (TIGR00089) and spans the archaea and eukaryotes. The only archaeal miaB-like genes are in this clade, while eukaryotes have sequences described by this model as well as ones falling within the scope of the MiaB equivalog model.
Probab=99.81 E-value=1.4e-18 Score=196.54 Aligned_cols=192 Identities=15% Similarity=0.255 Sum_probs=151.2
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCC----cccHHHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELK----DRDLDNIENMIC 757 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~----~~~~~~~~~~~~ 757 (965)
...+.+ ++|||++|+||..+...+ +++.+++|+|+++++.+.+.|++++.|++...... ...+..+++.+.
T Consensus 134 ~~~i~i-srGC~~~CsfC~ip~~~G----~~rsr~~e~Vl~Ei~~l~~~G~~ei~l~g~d~~~yg~d~~~~l~~Ll~~l~ 208 (420)
T TIGR01578 134 IEIIPI-NQGCLGNCSYCITKHARG----KLASYPPEKIVEKARQLVAEGCKEIWITSQDTGAYGRDIGSRLPELLRLIT 208 (420)
T ss_pred EEEEEE-ccCCCCCCCCCccccCCC----CcccCCHHHHHHHHHHHHHCCCeEEEEEeeccccccCCCCcCHHHHHHHHH
Confidence 366777 999999999998765322 35668999999999999999999999987543211 112344444443
Q ss_pred HHHh-cCcEeEE-ecC---CCCHHHHHHHHHhC-CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceee
Q psy8199 758 EVKK-IGLETCL-TLG---MLNENQAYRLKKVG-LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICC 828 (965)
Q Consensus 758 ~i~~-~~~~i~~-~~~---~~~~e~l~~Lk~aG-~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~ 828 (965)
.+.. ..+.+.. ++. .++++.++.++..+ +.++++++|| ++++++.|+++++.+++.++++.+++. |+.+.+
T Consensus 209 ~i~~~~~ir~~~~~p~~~~~~~~~l~~~~~~~~~~~~l~iglQSgsd~iL~~m~R~~~~~~~~~~i~~i~~~~~~i~i~~ 288 (420)
T TIGR01578 209 EIPGEFRLRVGMMNPKNVLEILDELANVYQHEKVYKFLHLPVQSGSDSVLKEMKREYTVSDFEDIVDKFRERFPDLTLST 288 (420)
T ss_pred hCCCCcEEEEcCCCCCcccccCHHHHHHHhcccccCceEeCCccCCHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 3322 1233322 221 34677788777655 6899999999 999999999999999999999999998 899999
Q ss_pred eEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHH
Q psy8199 829 GGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPL 880 (965)
Q Consensus 829 ~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~ 880 (965)
++|+|+ |||.+++.++++++.+++ ++.+.++.|+|.||||++..+..+.+
T Consensus 289 ~~IvG~PgET~ed~~~t~~~~~~~~--~~~i~~~~~~p~pGT~~~~~~~v~~~ 339 (420)
T TIGR01578 289 DIIVGFPTETDDDFEETMELLRKYR--PEKINITKFSPRPGTPAAKMKRIPTN 339 (420)
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHhC--CCEEEEEEeeCCCCCcccCCCCCCHH
Confidence 999999 799999999999999999 89999999999999999987665554
No 234
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1e-17 Score=191.03 Aligned_cols=344 Identities=12% Similarity=0.045 Sum_probs=211.3
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhh--ccccccCCCCcHHHHHHHHHHHhhcC--CCCC-eEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNK--LEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~--~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~-~v~~~~sGseA 326 (965)
.|..++|+..|. +.+..++.+.+++.+.+.. ...|....+..+.+..+++.+.+..+ ...+ +|++|+|+++|
T Consensus 31 ~~~~~~~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGN---PDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcC---CCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 466789987763 3343467788887776543 22344344556677888888877654 3455 79999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..++++... +++.|++.+++|.++.......+. .+..+|.+.... ++.+.+ .
T Consensus 108 l~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~--~~~d~~----~ 160 (403)
T PRK08636 108 YVHLVQAITN--------PGDVAIVPDPAYPIHSQAFILAGG-------------NVHKMPLEYNED--FELDED----Q 160 (403)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCcchHHHHHhcCC-------------EEEEEecccccc--CccChh----h
Confidence 9999987643 678999999999887433333222 233333321000 001110 0
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccccCCCcc
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWPD 485 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~~~pD 485 (965)
-.+.++++++++..++.++++.. ++|++|.+. +.+-+++|.++|++|++++|.||+|..|-..+.. .....+.-.+|
T Consensus 161 l~~~l~~~~~~~~~~~~~i~~~~-P~NPTG~~~-s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~ 238 (403)
T PRK08636 161 FFENLEKALRESSPKPKYVVVNF-PHNPTTATV-EKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKD 238 (403)
T ss_pred hhhHHHHHHhhccCCceEEEEeC-CCCCCCccC-CHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccc
Confidence 12356666665434455555553 489999876 6777999999999999999999999877433321 11111111223
Q ss_pred e-e---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccH----HHHHHH
Q psy8199 486 F-L---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI----LQRISQ 556 (965)
Q Consensus 486 i-v---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~----~~~~~~ 556 (965)
. + +|||.++ .| +++|++++++++++.+.. ......++.+.+++.++..+++- .+.+ .+..++
T Consensus 239 ~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~------~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~ 309 (403)
T PRK08636 239 VAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKK------IKSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRK 309 (403)
T ss_pred cEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHH------HHHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHH
Confidence 2 2 5899985 45 899999999999888765 11222345566677776666541 1223 333444
Q ss_pred HHHHHHHHHHcccCCCceeeeec-eeEEEEEEEeecCccchhhHHHHHHHHH-HHcCcEEeec-------CCEEEEeCCc
Q psy8199 557 DMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPI-------GNTVYLMPPY 627 (965)
Q Consensus 557 ~~~~l~~~L~~l~~~~~i~~v~g-~G~~~~i~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~-------~~~lR~~p~~ 627 (965)
+.+.+.+.|+.. ++....+ .|+++++.+. +.... .....+...+ .++||.+.|+ .+++|++ +
T Consensus 310 ~~~~l~~~L~~~----~~~~~~p~~g~~~~~~l~--~~~~~-~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~--~ 380 (403)
T PRK08636 310 RRDVLIESFANA----GWELQKPRASMFVWAKIP--EPARH-LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIA--L 380 (403)
T ss_pred HHHHHHHHHHHC----CCcccCCCcceEEEEECC--CccCC-CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEE--e
Confidence 445555555442 3443344 4666666653 11000 0134566554 4789999874 2689999 5
Q ss_pred ccCHHHHHHHHHhhhccc
Q psy8199 628 ILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~~~ 645 (965)
..+++.+++.++++...+
T Consensus 381 ~~~~~~l~~~~~rl~~~l 398 (403)
T PRK08636 381 IENENRIRQAARNIKKFL 398 (403)
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 578888999888886544
No 235
>PRK14336 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.81 E-value=1.4e-18 Score=196.05 Aligned_cols=191 Identities=12% Similarity=0.153 Sum_probs=157.1
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCccc---HHHHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRD---LDNIENMICE 758 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~---~~~~~~~~~~ 758 (965)
.+.+.+ ++|||++|.||..+...+ +++.+++++|+++++.+.+.|+++|.+++........+ .+.+.++++.
T Consensus 125 ~a~i~i-~rGC~~~CsFC~ip~~rG----~~rsrs~e~Iv~Ei~~l~~~G~~ei~l~~~~~~~yg~d~~~~~~l~~Ll~~ 199 (418)
T PRK14336 125 SANVTI-MQGCDNFCTYCVVPYRRG----REKSRSIAEIGCEVAELVRRGSREVVLLGQNVDSYGHDLPEKPCLADLLSA 199 (418)
T ss_pred EEEEEe-ccCCCCCCccCCccccCC----CCccCCHHHHHHHHHHHHHCCCeEEEEEecCccccccCCCCcccHHHHHHH
Confidence 355677 899999999998765322 34668999999999999999999999988754321111 2457777777
Q ss_pred HHhc-C-cEeE---EecCCCCHHHHHHHHHh--CCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceee
Q psy8199 759 VKKI-G-LETC---LTLGMLNENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICC 828 (965)
Q Consensus 759 i~~~-~-~~i~---~~~~~~~~e~l~~Lk~a--G~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~ 828 (965)
+.+. + ..+. .++..++++.++.|++. ++.++++++|| ++++++.|+++++.+++.++++.++++ |+.+.+
T Consensus 200 l~~~~~~~~ir~~~~~p~~i~~ell~~l~~~~~~~~~l~lglQSgsd~vLk~M~R~~~~~~~~~~i~~lr~~~pgi~i~~ 279 (418)
T PRK14336 200 LHDIPGLLRIRFLTSHPKDISQKLIDAMAHLPKVCRSLSLPVQAGDDTILAAMRRGYTNQQYRELVERLKTAMPDISLQT 279 (418)
T ss_pred HHhcCCccEEEEeccChhhcCHHHHHHHHhcCccCCceecCCCcCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEE
Confidence 7652 2 2332 24566789999999995 59999999999 999999999999999999999999998 999999
Q ss_pred eEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC-C-CCCCH
Q psy8199 829 GGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG-S-SILDP 879 (965)
Q Consensus 829 ~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~-~-~~~~~ 879 (965)
++|+|+ |||.+++.++++++.+++ ++.+.++.|.|.||||++. . ...+.
T Consensus 280 d~IvGfPGET~edf~~tl~fi~~~~--~~~~~v~~ysp~pGT~a~~~~~~~v~~ 331 (418)
T PRK14336 280 DLIVGFPSETEEQFNQSYKLMADIG--YDAIHVAAYSPRPQTVAARDMADDVPV 331 (418)
T ss_pred EEEEECCCCCHHHHHHHHHHHHhcC--CCEEEeeecCCCCCChhHhhCccCCCH
Confidence 999999 799999999999999999 8999999999999999984 4 33444
No 236
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.81 E-value=8.7e-18 Score=191.14 Aligned_cols=335 Identities=11% Similarity=0.010 Sum_probs=208.2
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC--CCCC-eEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~-~v~~~~sGseA 326 (965)
.|+.++|+..|. +.+..++++.+++.+.+... ..|....+..+.+..+++.+.+..+ .+.+ .+++|+|+++|
T Consensus 33 ~g~~~i~l~~g~---p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~a 109 (394)
T PRK05942 33 QGLDLIDLGMGN---PDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEG 109 (394)
T ss_pred cCCCeEEcCCCC---CCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHH
Confidence 366789997763 34445677888887776432 2233333445667777777766544 2455 58899999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..++.... .++++|++.+++|.++.......+. .+..+|....... ..
T Consensus 110 l~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~----------~~ 158 (394)
T PRK05942 110 LTHLALAYV--------NPGDVVLVPSPAYPAHFRGPLIAGA-------------QIYPIILKPENDW----------LI 158 (394)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHcCC-------------EEEEeecCCccCC----------cc
Confidence 999887663 3578899999999886433222211 2223332111000 03
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-ccccccc----C
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHA----E 481 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~----~ 481 (965)
|++++++.+. +++.+|++.. ++|++|.+. +.+.+++|.++|++||+++|+||+|..|...+. ..+.... +
T Consensus 159 d~~~l~~~~~---~~~k~i~l~~-P~NPtG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~ 233 (394)
T PRK05942 159 DLSSIPEEVA---QQAKILYFNY-PSNPTTATA-PREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKD 233 (394)
T ss_pred CHHHHHHhcc---ccceEEEEcC-CCCCCCCcC-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccc
Confidence 6778877774 2455555553 399999776 777899999999999999999999987643332 1111111 1
Q ss_pred CCcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHH
Q psy8199 482 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMK 559 (965)
Q Consensus 482 ~~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~ 559 (965)
....+-+|||.++..++++|++++++++++.+.. ......++.+.+++.++.++|+...+ +...++++++.+
T Consensus 234 ~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 307 (394)
T PRK05942 234 IGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRT------LKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRD 307 (394)
T ss_pred cEEEEecchhccCChhhheeeeecCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 1122347899885323899999999999988865 11223455677888888888863221 234555666666
Q ss_pred HHHHHHHcccCCCceeeeeceeE-EEEEEEeecCccchhhHHHHHHH-HHHHcCcEEeec-------CCEEEEeCCcccC
Q psy8199 560 KITKALTSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFV-AALKNELLLRPI-------GNTVYLMPPYILN 630 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~-~l~~~Gi~~~~~-------~~~lR~~p~~~~t 630 (965)
++.+.|++. ++....+.|. ++++.+. .... ..++.. .+.++||.+.|+ .+++|++.+ .+
T Consensus 308 ~~~~~L~~~----~~~~~~~~~~~f~~~~~~--~~~~----~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~ 375 (394)
T PRK05942 308 FLIQGLGEL----GWNIPPTKATMYLWVPCP--VGMG----STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--AD 375 (394)
T ss_pred HHHHHHHHC----CCeecCCCeeeEEEEECC--CCCC----HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CC
Confidence 666666543 3444455565 5555553 1111 223444 455789999763 268999953 45
Q ss_pred HHHHHHHHHhhhc
Q psy8199 631 KNEIQHMTSAIFQ 643 (965)
Q Consensus 631 ~~~i~~~~~~l~~ 643 (965)
.+.+.+.++++.+
T Consensus 376 ~~~l~~~l~~l~~ 388 (394)
T PRK05942 376 CDRLGEALDRLKQ 388 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 5666666666543
No 237
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=6.7e-18 Score=188.90 Aligned_cols=315 Identities=12% Similarity=0.137 Sum_probs=204.7
Q ss_pred cccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHH
Q psy8199 256 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSF 335 (965)
Q Consensus 256 ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~ 335 (965)
.+|+..|. +.++ .+|.+++++.+.+.... ...++.+...++.+.++++++...++|++++|+++|+..+++...
T Consensus 24 ~~~l~~~~--~~~~-~p~~~~~a~~~~~~~~~---~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~ 97 (351)
T PRK14807 24 KYKMDANE--TPFE-LPEEVIKNIQEIVKSSQ---VNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFI 97 (351)
T ss_pred eeEccCCC--CCCC-CCHHHHHHHHHHhhcCc---ccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhc
Confidence 35665553 2444 57889999988775321 122333445778888888887777899999999999998888653
Q ss_pred HHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHH
Q psy8199 336 HYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILL 415 (965)
Q Consensus 336 ~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l 415 (965)
.++++|++.+++|.++.......+. .+..++.... +. .|++++++++
T Consensus 98 --------~~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~-~~-----------~d~~~l~~~~ 144 (351)
T PRK14807 98 --------NKGDVVIYPHPSFAMYSVYSKIAGA-------------VEIPVKLKED-YT-----------YDVGSFIKVI 144 (351)
T ss_pred --------CCCCEEEEeCCChHHHHHHHHHcCC-------------eEEEeecCCC-CC-----------CCHHHHHHHh
Confidence 2568899999999876332222221 2233333211 11 2577888887
Q ss_pred HhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---eeccc
Q psy8199 416 KKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLSKG 492 (965)
Q Consensus 416 ~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~sK~ 492 (965)
.. .++.+|++.. ++|++|.+.+ .+++.++|++++.++|+||+|.+|. +.... ......++++ +|||.
T Consensus 145 ~~--~~~k~v~l~~-p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~-~~~~~~~~vi~~~S~SK~ 214 (351)
T PRK14807 145 EK--YQPKLVFLCN-PNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY--GNTIV-DVINEFENLIVLRTLSKA 214 (351)
T ss_pred hc--cCCCEEEEeC-CCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc--ccchH-HHhhhCCCEEEEecchHh
Confidence 53 2345555445 5999998886 5667888888888999999998762 32111 1111123444 68998
Q ss_pred cC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCC
Q psy8199 493 IT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITH 571 (965)
Q Consensus 493 l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~ 571 (965)
++ .| +++|++++++++++.+..- ...++.+++++.++.+.|+.-.-++..+.++++.+++.+.|++ .
T Consensus 215 ~~~~G-lRiG~~v~~~~~~~~~~~~--------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~---~ 282 (351)
T PRK14807 215 FGLAG-LRVGYAVANENILKYLNLV--------KSPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSK---I 282 (351)
T ss_pred cccch-hceeeeecCHHHHHHHHHc--------cCCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh---C
Confidence 86 55 8999999999999888651 1234567888888888885311122334555566666666654 3
Q ss_pred CceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC------CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 572 PKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG------NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 572 ~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+++...++.|.++.+.+. + ...+.+.|.++||.+++.. +++|++ ..+.++.+.+++.+.+
T Consensus 283 ~g~~~~~~~~~~~~i~~~--~-------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis---~~~~~~~~~l~~~l~~ 348 (351)
T PRK14807 283 PGIKVYPSKTNFILVKFK--D-------ADYVYQGLLERGILVRDFSKVEGLEGALRIT---VSSCEANDYLINGLKE 348 (351)
T ss_pred CCcEECcCCccEEEEEcC--C-------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEE---cCCHHHHHHHHHHHHH
Confidence 455444556777666553 1 3467788889999997642 589999 3456777788777654
No 238
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.81 E-value=3.4e-18 Score=191.06 Aligned_cols=321 Identities=17% Similarity=0.127 Sum_probs=203.8
Q ss_pred cccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHH
Q psy8199 258 DAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHY 337 (965)
Q Consensus 258 D~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~ 337 (965)
||.|. +++| .+|.+.+++.+.+... . ..++.+...++++.++++++ .+.+++++||++|+..+++....
T Consensus 1 ~~~~~---~~~~-~~~~v~~a~~~~~~~~---~-~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~- 69 (338)
T cd06502 1 DFRSD---TVTG-PTPEMLEAMAAANVGD---D-VYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQ- 69 (338)
T ss_pred Ccccc---cCCC-CCHHHHHHHHhcccCC---c-ccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcC-
Confidence 45554 5677 7899999998765322 1 22456778899999999986 56888999999999999886632
Q ss_pred HHhcCCCCceEEEEEcCCccCCccccc---cccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy8199 338 WYNKGFLNKKKFICLQNSYHGETLGAL---AVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 414 (965)
Q Consensus 338 ~~~~g~~~~~~vi~~~~~yHg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 414 (965)
+++.|++.+++| .+..... ...| .....++... .. .|+++|+++
T Consensus 70 -------~gd~v~~~~~~~-~~~~~~~~~~~~~g------------~~~~~v~~~~--~~-----------~d~~~l~~~ 116 (338)
T cd06502 70 -------PGGSVICHETAH-IYTDEAGAPEFLSG------------VKLLPVPGEN--GK-----------LTPEDLEAA 116 (338)
T ss_pred -------CCCeEEEecCcc-eeeecCCcHHHHcC------------ceEEeecCCC--Cc-----------CCHHHHHHH
Confidence 456777666554 3321110 0111 1223333221 11 377889888
Q ss_pred HHhCC----CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCC--cccccccccccCCCccee-
Q psy8199 415 LKKNH----NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG--RTGKFFACEHAEIWPDFL- 487 (965)
Q Consensus 415 l~~~~----~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g--r~G~~~~~~~~~~~pDiv- 487 (965)
+.+.. .++.+|+++. ++|+ |.+. +.+.+++|.++|++||+++|+||+|..+. ..|. ....+...+|++
T Consensus 117 i~~~~~~~~~~~~~v~l~~-p~n~-g~~~-~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~ 191 (338)
T cd06502 117 IRPRDDIHFPPPSLVSLEN-TTEG-GTVY-PLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVS 191 (338)
T ss_pred hhccCCCcCCcceEEEEEe-ecCC-cccc-CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEE
Confidence 86421 2456666665 5666 4444 77789999999999999999999874211 1121 111222346666
Q ss_pred -eeccccCCCccccee-eeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 488 -CLSKGITGGYLPLSL-VMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 488 -t~sK~l~gG~~pig~-v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
+++|.++. |.|+ +++++++++.+... ...++++++.+++++++++++|+.-......+++.++.+++.+.|
T Consensus 192 ~s~sK~~~~---~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L 264 (338)
T cd06502 192 FCLSKGGGA---PVGAVVVGNRDFIARARRR----RKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEAL 264 (338)
T ss_pred EeccccCCC---ccceEEECCHHHHHHHHHH----HHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 57787754 3354 45788888877541 012345666777888888888853111234577777888888888
Q ss_pred HcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHH---HcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhh
Q psy8199 566 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL---KNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 566 ~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~---~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
+++. +....+.+.++.+.+. .. ......+.+.+. ++|+++.+.+ +.+||+|++.+++++++++++++
T Consensus 265 ~~~~----~~~~~~~~~~~~v~~~-~~----~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l 335 (338)
T cd06502 265 EELG----GLESEVQTNIVLLDPV-EA----NAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSAL 335 (338)
T ss_pred HhcC----CCcccccCCeEEEecC-Cc----cHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHH
Confidence 7651 1223345666666543 11 122223434443 7899998764 89999999999999999999887
Q ss_pred hc
Q psy8199 642 FQ 643 (965)
Q Consensus 642 ~~ 643 (965)
..
T Consensus 336 ~~ 337 (338)
T cd06502 336 KA 337 (338)
T ss_pred hc
Confidence 53
No 239
>PLN02721 threonine aldolase
Probab=99.81 E-value=8.6e-18 Score=189.02 Aligned_cols=332 Identities=14% Similarity=0.139 Sum_probs=204.5
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 334 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a 334 (965)
+++|+.++.+. ...|.+.+|+.+. ..... ..+.++...+|.+.++++++ .+.+++++||++++..++.+.
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~--~~~~~--~~~~~~~~~~l~~~la~~~~--~~~~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANA--EVDDD--VLGYDPTALRLEEEMAKIFG--KEAALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhc--cCCCc--ccCCCHHHHHHHHHHHHHhC--CceeEEecCccHHHHHHHHHH
Confidence 67888888665 2578999998764 11111 22345667899999999995 456889999999998887765
Q ss_pred HHHHHhcCCCCceEEEEEcCCccC-Cccc-cccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHH
Q psy8199 335 FHYWYNKGFLNKKKFICLQNSYHG-ETLG-ALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 412 (965)
Q Consensus 335 ~~~~~~~g~~~~~~vi~~~~~yHg-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 412 (965)
.. .++++|++.+++|.. +..+ ..... ......+|.... +. .|+++++
T Consensus 76 ~~-------~~gd~Vl~~~~~~~~~~~~~~~~~~~------------g~~~~~v~~~~~-~~-----------~d~~~l~ 124 (353)
T PLN02721 76 CD-------VRGSEVILGDNSHIHLYENGGISTLG------------GVHPRTVKNNED-GT-----------MDLDAIE 124 (353)
T ss_pred cc-------CCCCeEEEcCccceehhcccchhhhc------------CceeEecCCCcC-CC-----------cCHHHHH
Confidence 32 256789998888632 2110 01111 112233332111 11 3788999
Q ss_pred HHHHhC----CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccccCCCcc--
Q psy8199 413 ILLKKN----HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWPD-- 485 (965)
Q Consensus 413 ~~l~~~----~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~~~pD-- 485 (965)
+++++. .+++++|++++ ++++.|...++.+.+++|.++|++||+++|+||+|. ++-.... ..........|
T Consensus 125 ~~i~~~~~~~~~~~~~v~l~~-~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~~d~~ 202 (353)
T PLN02721 125 AAIRPKGDDHFPTTRLICLEN-THANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKAADSV 202 (353)
T ss_pred HHHHhccCCCCCcceEEEEec-cccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhhCCEE
Confidence 888642 13577888888 666655555688889999999999999999999985 4321100 00010111234
Q ss_pred eeeeccccCCCccccee-eeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Q psy8199 486 FLCLSKGITGGYLPLSL-VMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 564 (965)
Q Consensus 486 ivt~sK~l~gG~~pig~-v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~ 564 (965)
++++||++++ |+|+ +++++++++.+..- ... .+++....+..+++++.+++...+ ..++..++.+++.+.
T Consensus 203 ~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~ 273 (353)
T PLN02721 203 SVCLSKGLGA---PVGSVIVGSKSFIRKAKRL---RKT-LGGGMRQVGVLAAAALVALQENVP--KLEDDHKKAKLLAEG 273 (353)
T ss_pred EEecccccCC---ceeeEEecCHHHHHhHHHH---HHh-cCCCeehhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 3478999874 5675 66788887765430 000 111111112333444455543211 234445667777777
Q ss_pred HHcccCCCcee--eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhh
Q psy8199 565 LTSLITHPKII--NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 565 L~~l~~~~~i~--~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
|+++ +++. ...+.+.++.+.+. +.. ......+++.|.++||.+++.+ +.+|+++++.+++++++++++++
T Consensus 274 L~~~---~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l 346 (353)
T PLN02721 274 LNQI---KGLRVNVAAVETNIVYFDIT--DGS--RITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCF 346 (353)
T ss_pred HHhC---CCcEEecCCccceEEEEEcc--CCc--cccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHH
Confidence 7655 3332 12344667777664 110 0124568889999999999876 78999999899999999999998
Q ss_pred hccc
Q psy8199 642 FQTF 645 (965)
Q Consensus 642 ~~~~ 645 (965)
.+.+
T Consensus 347 ~~~~ 350 (353)
T PLN02721 347 QQAA 350 (353)
T ss_pred HHHh
Confidence 7643
No 240
>PRK07550 hypothetical protein; Provisional
Probab=99.81 E-value=1.1e-17 Score=190.16 Aligned_cols=337 Identities=11% Similarity=0.017 Sum_probs=212.7
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 327 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~ 327 (965)
.|+.++|+.++... +. .++.+.+++.+.+... ..|....+..+.+..+++.+.+..+ ...+++++++|+++|+
T Consensus 27 ~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 103 (386)
T PRK07550 27 ADGPLIDLSQAVPG--YP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF 103 (386)
T ss_pred cCCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 35678999887642 22 3677888888766432 1232233556667788888876654 3457999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 407 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 407 (965)
..++++... ++++|++.+++|.++....... ...+..++.....+.. .|
T Consensus 104 ~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~----------~~ 152 (386)
T PRK07550 104 WAAMVTLAG--------AGDEVILPLPWYFNHKMWLDML-------------GIRPVYLPCDEGPGLL----------PD 152 (386)
T ss_pred HHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhc-------------CCEEEEEecCCCcCCC----------CC
Confidence 988887643 5678999999997763221111 1123333332111110 26
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-c-ccccccCCCcc
Q psy8199 408 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-F-FACEHAEIWPD 485 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~-~~~~~~~~~pD 485 (965)
++++++++++ ...+.+++.| +|++|.+. +.+.+++|.++|++||+++|+||+|..|...+. . ..+...+...+
T Consensus 153 ~~~l~~~~~~--~~~~v~~~~P--~NPtG~~~-~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~ 227 (386)
T PRK07550 153 PAAAEALITP--RTRAIALVTP--NNPTGVVY-PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDT 227 (386)
T ss_pred HHHHHHHhcc--cCcEEEEeCC--CCCCCccc-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCcccc
Confidence 7888888863 2234455555 78899866 688899999999999999999999987732211 1 11111111223
Q ss_pred ee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHH
Q psy8199 486 FL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMK 559 (965)
Q Consensus 486 iv---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~ 559 (965)
++ +|||.++ .| +++|++++++++++.+.. .....+.+.+.+++.++.++|+.+.+ +...+.++++.+
T Consensus 228 ~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T PRK07550 228 LVHLYSFSKSYALTG-HRVGAVVASPARIAEIEK------FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRD 300 (386)
T ss_pred EEEEecchhhccCcc-cceEeeecCHHHHHHHHH------HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 43 7899987 45 899999999998887765 23334556678888888887754321 223445566666
Q ss_pred HHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCcccCH
Q psy8199 560 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNK 631 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~t~ 631 (965)
++.+.|... +++......|.++++.+. ..+ ....+++..|. ++||.+.|+ ++++|++.. ..++
T Consensus 301 ~l~~~L~~~---~~~~~~~~g~~~~~~~~~-~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~ 371 (386)
T PRK07550 301 AFRAVFARL---PGWELLASGAYFAYVRHP-FPD----RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA-NADV 371 (386)
T ss_pred HHHHHHHhC---CCceeCCCceEEEEecCC-CCC----CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee-cCCH
Confidence 666666543 233222233445555543 101 11345767664 689999873 258999964 2468
Q ss_pred HHHHHHHHhhhc
Q psy8199 632 NEIQHMTSAIFQ 643 (965)
Q Consensus 632 ~~i~~~~~~l~~ 643 (965)
++++++++++.+
T Consensus 372 ~~~~~~~~~l~~ 383 (386)
T PRK07550 372 AGIGELVERLRA 383 (386)
T ss_pred HHHHHHHHHHHh
Confidence 889999888764
No 241
>PRK09082 methionine aminotransferase; Validated
Probab=99.81 E-value=7.2e-18 Score=191.26 Aligned_cols=331 Identities=10% Similarity=0.061 Sum_probs=214.0
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcCCC--CC-eEEEcCChhHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQYK--LG-HCFYGSDGASAVEV 329 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~--~~-~v~~~~sGseA~~~ 329 (965)
+.++|+..|.. .++ .+|.+.+++.+.++.. ..|....+..+.+..+++.+.+.++.. .+ ++++++||++|+..
T Consensus 30 ~~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~ 106 (386)
T PRK09082 30 HGAINLSQGFP--DFD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA 106 (386)
T ss_pred CCEEEecCCCC--CCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence 46788887743 233 4788999998877542 233334456667788888888776533 23 79999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
++..... ++++|++.+++|.++.......+ ..+..++....... .|++
T Consensus 107 ~~~~~~~--------~gd~Vli~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~-----------~d~~ 154 (386)
T PRK09082 107 AILALVR--------PGDEVIVFDPSYDSYAPAIELAG-------------GRAVRVALQPPDFR-----------VDWQ 154 (386)
T ss_pred HHHHHcC--------CCCEEEEeCCCchhhHHHHHHcC-------------CEEEEEecCccccc-----------CCHH
Confidence 9986642 56889999999877633222221 12333333111111 3678
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc--ccccccCCCccee
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF--FACEHAEIWPDFL 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~--~~~~~~~~~pDiv 487 (965)
++++.+. +++.+|++.. ++|++|.+. +.+.+++|.++|++||+++|+||+|..+-..+.. ......+..+.++
T Consensus 155 ~l~~~~~---~~~~~v~l~~-p~NPtG~~~-~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i 229 (386)
T PRK09082 155 RFAAAIS---PRTRLIILNT-PHNPSGTVW-SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAF 229 (386)
T ss_pred HHHHhcC---ccceEEEEeC-CCCCCCcCC-CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEE
Confidence 8888775 2455555655 589999876 6777999999999999999999999766433321 1122223333444
Q ss_pred ---eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhccc----HHHHHHHHHHH
Q psy8199 488 ---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN----ILQRISQDMKK 560 (965)
Q Consensus 488 ---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~----~~~~~~~~~~~ 560 (965)
+|||.++..++++|++++++++++.+.. ......++.+++++.++.+.|+. .+. +.+.++++.+.
T Consensus 230 ~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~ 301 (386)
T PRK09082 230 VVSSFGKTYHVTGWKVGYCVAPAALSAEFRK------VHQYNTFTVNTPAQLALADYLRA--EPEHYLELPAFYQAKRDR 301 (386)
T ss_pred EEeechhhccchhhhhhhhhCCHHHHHHHHH------HHhhhcCCCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHH
Confidence 6899986322899999999999988765 22234566788888887777642 222 33445566666
Q ss_pred HHHHHHcccCCCceeeeeceeEE-EEEEEeecCccchhhHHHHHHHHH-HHcCcEEeecC---------CEEEEeCCccc
Q psy8199 561 ITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPIG---------NTVYLMPPYIL 629 (965)
Q Consensus 561 l~~~L~~l~~~~~i~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~---------~~lR~~p~~~~ 629 (965)
+.+.|++. ++...++.|.+ +++.+..-+. ....++.+.| .++||.+.|+. +++|++ +..
T Consensus 302 ~~~~L~~~----~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~--~~~ 371 (386)
T PRK09082 302 FRAALANS----RFKLLPCEGTYFQLVDYSAISD----LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLC--FAK 371 (386)
T ss_pred HHHHHHhC----CCcccCCCeeEEEEEeccccCC----CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEE--ecC
Confidence 66666553 34444555555 4445530011 1134566665 57899987731 579999 556
Q ss_pred CHHHHHHHHHhhh
Q psy8199 630 NKNEIQHMTSAIF 642 (965)
Q Consensus 630 t~~~i~~~~~~l~ 642 (965)
+++.+++.++++.
T Consensus 372 ~~~~l~~~~~rl~ 384 (386)
T PRK09082 372 QEETLDAAAERLC 384 (386)
T ss_pred CHHHHHHHHHHHh
Confidence 8888998888775
No 242
>PRK07777 aminotransferase; Validated
Probab=99.81 E-value=8.3e-18 Score=191.08 Aligned_cols=334 Identities=8% Similarity=0.053 Sum_probs=210.9
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhh-ccccccCCCCcHHHHHHHHHHHhhcCCC--CC-eEEEcCChhHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNK-LEHVMLSNLTHKPVIKLSEKLSSLTQYK--LG-HCFYGSDGASAVEV 329 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~~~--~~-~v~~~~sGseA~~~ 329 (965)
..++|+..|..... .++.+.+++.+.+.. ...|....+..+.+..+++.+.+..+.. .+ ++++|+||++|+..
T Consensus 24 ~~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 100 (387)
T PRK07777 24 TGAVNLGQGFPDED---GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAA 100 (387)
T ss_pred CCeEEccCCCCCCC---CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH
Confidence 36788888764332 256788888776654 2233333445566677777776665432 33 79999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAI 408 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ 408 (965)
++.... .++++|++..++|+++.......+. ....++.... .... .|+
T Consensus 101 ~~~~~~--------~~gd~vli~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~----------~d~ 149 (387)
T PRK07777 101 AVLGLV--------EPGDEVLLIEPYYDSYAAVIAMAGA-------------HRVPVPLVPDGRGFA----------LDL 149 (387)
T ss_pred HHHHhc--------CCCCEEEEeCCCchhhHHHHHHCCC-------------EEEEeecCCccCCCc----------CCH
Confidence 887553 3567899999999887422222211 1222222111 0000 267
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-ccccccc-CCCcce
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHA-EIWPDF 486 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~-~~~pDi 486 (965)
++|++++.+ ++.+|++.+ ++|++|.+. +.+.+++|.++|++|++++|+||+|.++...+. +.....+ +...++
T Consensus 150 ~~l~~~~~~---~~~~v~l~~-p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK07777 150 DALRAAVTP---RTRALIVNS-PHNPTGTVL-TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERT 224 (387)
T ss_pred HHHHHhcCc---ccEEEEEcC-CCCCCCccC-CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcE
Confidence 888877742 455666666 689999876 778899999999999999999999987744332 1122211 222222
Q ss_pred e---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--cccHHHHHHHHHHH
Q psy8199 487 L---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKK 560 (965)
Q Consensus 487 v---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~~~~~~~~~~~~~~ 560 (965)
+ +|||.++ .| +++|++++++++++.+.. .....++..+++.+.++..+|+..+ ...+.+.++++.+.
T Consensus 225 i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (387)
T PRK07777 225 VTISSAAKTFNVTG-WKIGWACGPAPLIAAVRA------AKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDR 297 (387)
T ss_pred EEEeechhhccCcC-ceeEEEecCHHHHHHHHH------HHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 2 6899987 45 899999999998887764 1233455556666666666664211 12345566677777
Q ss_pred HHHHHHcccCCCceeeeeceeEEEE-EEEeecCccchhhHHHHHHHHHH-HcCcEEeec----------CCEEEEeCCcc
Q psy8199 561 ITKALTSLITHPKIINFRQKGMIWA-FDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI----------GNTVYLMPPYI 628 (965)
Q Consensus 561 l~~~L~~l~~~~~i~~v~g~G~~~~-i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----------~~~lR~~p~~~ 628 (965)
+.+.|++. ++....+.|.++. +.+. ..+. .....+++.|. ++||.+.|+ .+++|++ +.
T Consensus 298 l~~~L~~~----~~~~~~~~g~~~~~~~~~-~~~~---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~--~~ 367 (387)
T PRK07777 298 LAAGLAEA----GFEVHDSAGTYFLCADPR-PLGY---DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFA--FC 367 (387)
T ss_pred HHHHHHhC----CCCccCCCcceEEEeccc-ccCC---CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEE--ec
Confidence 77777654 3333445555544 4542 1110 11346778886 679999763 1479999 55
Q ss_pred cCHHHHHHHHHhhhc
Q psy8199 629 LNKNEIQHMTSAIFQ 643 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~ 643 (965)
.+++++++.++++.+
T Consensus 368 ~~~~~l~~~l~~l~~ 382 (387)
T PRK07777 368 KRDDTLDEAIRRLRA 382 (387)
T ss_pred CCHHHHHHHHHHHHH
Confidence 688899999888764
No 243
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.81 E-value=1.4e-17 Score=193.77 Aligned_cols=329 Identities=13% Similarity=0.115 Sum_probs=206.3
Q ss_pred CHHHHHHHHHHHhhc----cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCC
Q psy8199 272 NSYINKALKNQLNKL----EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLN 345 (965)
Q Consensus 272 ~p~v~~av~~~~~~~----~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~ 345 (965)
+..+++++.+.++.. ..|....+..+.++.+++.+.+..+ .+.++|++|+|+++|+..++++... .+
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-------~~ 162 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG-------DP 162 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc-------CC
Confidence 456778877665542 2244444566677777777776533 3567999999999999999987742 25
Q ss_pred ceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCcE
Q psy8199 346 KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKI 422 (965)
Q Consensus 346 ~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~ 422 (965)
++.|++.+++|.++.......++ ..+.+|.....+.. .|+++|++++.+. ..++
T Consensus 163 gD~Vlv~~P~y~~y~~~~~~~g~-------------~~v~v~~~~~~~~~----------~d~~~l~~~l~~~~~~~~~~ 219 (481)
T PTZ00377 163 SDGVMIPIPQYPLYSAAITLLGG-------------KQVPYYLDEEKGWS----------LDQEELEEAYEQAVRNGITP 219 (481)
T ss_pred CCEEEECCCCchhHHHHHHHcCC-------------EEEEEEeccccCCC----------CCHHHHHHHHHHHHhcCCCe
Confidence 68899999999988544333332 22333332111100 2678888888642 1245
Q ss_pred E-EEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccc-ccc-cccc--cCCCc------cee---e
Q psy8199 423 A-AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG-KFF-ACEH--AEIWP------DFL---C 488 (965)
Q Consensus 423 a-aii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G-~~~-~~~~--~~~~p------Div---t 488 (965)
. .++++| +|++|.+. +.+.+++|.++|++||+++|+||+|..+...+ ..+ +... .++.+ .++ +
T Consensus 220 k~l~l~~P--~NPTG~~~-s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S 296 (481)
T PTZ00377 220 RALVVINP--GNPTGQVL-TRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHS 296 (481)
T ss_pred eEEEEECC--CCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEec
Confidence 4 556666 89999876 78889999999999999999999998764322 111 1110 12222 244 5
Q ss_pred eccccC--CCcccceeeee---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--c----------ccHH
Q psy8199 489 LSKGIT--GGYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--K----------DNIL 551 (965)
Q Consensus 489 ~sK~l~--gG~~pig~v~~---~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~----------~~~~ 551 (965)
|||++. .| |++|++++ ++++++.+.. . ...+++.+++++.++.++|+-.. + ....
T Consensus 297 ~SK~~~~~~G-lRiG~~~~~~~p~~li~~l~~------~-~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (481)
T PTZ00377 297 TSKGIIGECG-RRGGYFELTNIPPEVREQIYK------L-ASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIF 368 (481)
T ss_pred CCcccccCCc-CceEEEEEeCCCHHHHHHHHH------H-hheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHH
Confidence 899753 25 89999986 8899888865 1 22344678899999988885210 0 1112
Q ss_pred HHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEE-EEeecCccch------hhHHHHH-HHHHHHcCcEEeecC-----
Q psy8199 552 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQI------ETFSKKF-FVAALKNELLLRPIG----- 618 (965)
Q Consensus 552 ~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i-~~~~~~~~~~------~~~~~~~-~~~l~~~Gi~~~~~~----- 618 (965)
+.++++.+.+.+.|++ .+++....++|.|+.+ .+........ ......+ ...+.++||.+.|+.
T Consensus 369 ~~~~~rr~~l~~~L~~---~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~ 445 (481)
T PTZ00377 369 TSLKRRAELLTDELNK---IEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQK 445 (481)
T ss_pred HHHHHHHHHHHHHHhc---CCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCC
Confidence 2334555555555544 4567777787766655 3320000000 0001223 455668899998732
Q ss_pred ---CEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 619 ---NTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 619 ---~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
+++|++ +..++++++++++++.+.+.
T Consensus 446 ~~~~~~Rls--~~~~~e~l~~~l~rl~~~~~ 474 (481)
T PTZ00377 446 PGTYHFRIT--ILPPEEQIEEMVKKIKEFHE 474 (481)
T ss_pred CCCCEEEEE--ECCCHHHHHHHHHHHHHHHH
Confidence 489999 56778899999998876543
No 244
>PRK05839 hypothetical protein; Provisional
Probab=99.80 E-value=1.4e-17 Score=187.77 Aligned_cols=331 Identities=12% Similarity=0.018 Sum_probs=206.4
Q ss_pred cCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVE 328 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~ 328 (965)
..|+.++|+..|.. +++ .++.+.+++.+.......|....+..+.++.+++.+.+..+ ...++|++|+|+++|+.
T Consensus 21 ~~~~~~i~l~~~~p--~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~ 97 (374)
T PRK05839 21 NKEYKGLDLTIGEP--QFE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLF 97 (374)
T ss_pred cCCCCeEEcCCCCC--CCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 34889999988754 455 36888888887665555555455666788888888888765 45789999999999998
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.++++...- .+++.|++..++|.++...+...+. .+..+|.....+.. .|+
T Consensus 98 ~~~~~~~~~------~~gd~vlv~~P~y~~~~~~~~~~g~-------------~v~~v~~~~~~~~~----------~d~ 148 (374)
T PRK05839 98 NFPQFVLFD------KQNPTIAYPNPFYQIYEGAAIASRA-------------KVLLMPLTKENDFT----------PSL 148 (374)
T ss_pred HHHHHHhcC------CCCCEEEECCCCchhhHHHHHhcCC-------------EEEEeecccccCCc----------CCc
Confidence 887755320 2467899999999887443322221 23333332111000 012
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccccc----C--C
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA----E--I 482 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~----~--~ 482 (965)
.+. .++ ...+.++++| +|++|.+. +.+.+++|.++|++||+++|+||+|..|...+...+.... + .
T Consensus 149 ~~~--~~~---~~k~v~i~nP--~NPTG~~~-s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~ 220 (374)
T PRK05839 149 NEK--ELQ---EVDLVILNSP--NNPTGRTL-SLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNES 220 (374)
T ss_pred chh--hhc---cccEEEEeCC--CCCcCccc-CHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccc
Confidence 111 121 2234455556 99999876 6778999999999999999999999877322222111110 1 1
Q ss_pred Cccee---eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHH
Q psy8199 483 WPDFL---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMK 559 (965)
Q Consensus 483 ~pDiv---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~ 559 (965)
.++++ +|||.++..++++|++++++++++.+.. .....+++.+.+++.++.++|. +++..++.++.-+
T Consensus 221 ~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~ 291 (374)
T PRK05839 221 FKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKA------YRTYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYA 291 (374)
T ss_pred cCcEEEEeccccccCCccceeEEEecCHHHHHHHHH------HHhhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHH
Confidence 13444 6899765433899999999999887754 1112234567777887777663 2333333333222
Q ss_pred HHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec---------CCEEEEeCCccc
Q psy8199 560 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI---------GNTVYLMPPYIL 629 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~---------~~~lR~~p~~~~ 629 (965)
.-++.+.+.. ++. .+..|.++.+.+. + ..++.+.|. ++||.+.|+ .+++|++ +..
T Consensus 292 ~~~~~~~~~l---~~~-~p~gg~fi~~~~~--~-------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis--~~~ 356 (374)
T PRK05839 292 KNLKLAREIL---GIT-IPPATFYVWLPVD--N-------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIA--LVY 356 (374)
T ss_pred HHHHHHHHhc---CCC-CCCeeEEEEEeCC--C-------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEE--ecC
Confidence 2223232221 112 3344666666553 1 235667776 499999873 2689999 456
Q ss_pred CHHHHHHHHHhhhccc
Q psy8199 630 NKNEIQHMTSAIFQTF 645 (965)
Q Consensus 630 t~~~i~~~~~~l~~~~ 645 (965)
+++++.++++++.+.+
T Consensus 357 ~~~~~~~~l~~l~~~l 372 (374)
T PRK05839 357 DTPKLEKALEIIKTYL 372 (374)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 7888999888876543
No 245
>PRK14862 rimO ribosomal protein S12 methylthiotransferase; Provisional
Probab=99.80 E-value=2.4e-18 Score=195.38 Aligned_cols=198 Identities=15% Similarity=0.184 Sum_probs=157.9
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCccc-------------H
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRD-------------L 749 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~-------------~ 749 (965)
+.+.+ |+|||++|.||..+..++ +++.+++++|+++++.+.+.|++++.+.+........+ .
T Consensus 141 a~v~i-srGCp~~CsFC~ip~~~G----~~rsr~~e~Vv~Ei~~l~~~g~kei~l~~~d~~~yg~d~~~~~~~~~~~~~~ 215 (440)
T PRK14862 141 AYLKI-SEGCNHRCTFCIIPSMRG----DLVSRPIGDVLREAERLVKAGVKELLVISQDTSAYGVDVKYRTGFWNGRPVK 215 (440)
T ss_pred EEEEe-ccCCCCCCccCCcccccC----CccccCHHHHHHHHHHHHHCCCceEEEEecChhhhccccccccccccccchh
Confidence 44566 999999999998775433 35668999999999999999999999985432100000 3
Q ss_pred HHHHHHHHHHHhcCcEeEE---ecCCCCHHHHHHHHHhCCC--eEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc-
Q psy8199 750 DNIENMICEVKKIGLETCL---TLGMLNENQAYRLKKVGLD--YYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV- 822 (965)
Q Consensus 750 ~~~~~~~~~i~~~~~~i~~---~~~~~~~e~l~~Lk~aG~~--~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~- 822 (965)
.++.++++.+.+.++.+.+ .+...+++.++.|++ |.. .+.+++|| ++++++.|++..++++.+++++.+++.
T Consensus 216 ~~~~~Ll~~l~~~~~~~r~~~~~p~~~~dell~~m~~-g~~~~~l~IglESgs~~vLk~m~r~~~~~~~~~~i~~lr~~~ 294 (440)
T PRK14862 216 TRMTDLCEALGELGAWVRLHYVYPYPHVDEVIPLMAE-GKILPYLDIPFQHASPRVLKRMKRPASVEKTLERIKKWREIC 294 (440)
T ss_pred hHHHHHHHHHHhcCCEEEEecCCCCcCCHHHHHHHhc-CCCccccccccccCCHHHHHhcCCCCCHHHHHHHHHHHHHHC
Confidence 5788888888876663332 333457899999999 654 78899999 999999999999999999999999996
Q ss_pred -CCceeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC-CCCCHHHHHHHHHH
Q psy8199 823 -GINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS-SILDPLEFIRTIAV 888 (965)
Q Consensus 823 -Gi~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~-~~~~~~~~~~~ia~ 888 (965)
|+.+.+++|+|+ |||.+++.++++++++++ ++.+.++.|.|.||||.... ...++++..+....
T Consensus 295 ~~i~i~t~~IvGfPgET~edf~~tl~fi~e~~--~d~~~~f~ysP~pGT~a~~~~~~v~~~~~~~r~~~ 361 (440)
T PRK14862 295 PDLTIRSTFIVGFPGETEEDFQMLLDFLKEAQ--LDRVGCFKYSPVEGATANDLPDQVPEEVKEERWAR 361 (440)
T ss_pred CCceecccEEEECCCCCHHHHHHHHHHHHHcC--CCeeeeEeecCCCCCchhhCCCCCCHHHHHHHHHH
Confidence 788889999998 799999999999999999 89999999999999998643 34666554444333
No 246
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.80 E-value=8e-18 Score=191.34 Aligned_cols=335 Identities=16% Similarity=0.128 Sum_probs=207.8
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVA 330 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~A 330 (965)
..++|+..|.. .++. ++.+.+++.+.+... ..|....+..+....+++.+.+..+ .+.+++++++|+++|+..+
T Consensus 33 ~~~i~l~~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (391)
T PRK08361 33 ENVISLGIGEP--DFDT-PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLA 109 (391)
T ss_pred cCeEEcCCCCC--CCCC-CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHH
Confidence 45788877643 3443 688889988876542 2232233445566667766655443 3567999999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHHHHHHH
Q psy8199 331 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIF 409 (965)
Q Consensus 331 l~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~ 409 (965)
++.... +++.|++.+++|.++...+.. .| ..+..+|.... .+. .|++
T Consensus 110 ~~~l~~--------~g~~Vlv~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~~~-----------~d~~ 157 (391)
T PRK08361 110 FESLLE--------EGDEVIIPDPAFVCYVEDAKI-AE------------AKPIRIPLREENEFQ-----------PDPD 157 (391)
T ss_pred HHHhcC--------CCCEEEEcCCCCcccHHHHHH-cC------------CEEEEEecCCccCCC-----------CCHH
Confidence 886632 567899999999776322211 11 12333333211 111 3678
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-cccccccCCCccee-
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHAEIWPDFL- 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pDiv- 487 (965)
++++.+.+ ++.++++.. ++|++|.+. +.+.+++|.++|+++++++|+||+|..|...+. ...........+++
T Consensus 158 ~l~~~i~~---~~~~v~i~~-p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~ 232 (391)
T PRK08361 158 ELLELITK---RTRMIVINY-PNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILA 232 (391)
T ss_pred HHHHhccc---ccEEEEEeC-CCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEE
Confidence 88887753 344444544 489999766 677799999999999999999999987633222 11111111112233
Q ss_pred -eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHH
Q psy8199 488 -CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD----NILQRISQDMKKI 561 (965)
Q Consensus 488 -t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~----~~~~~~~~~~~~l 561 (965)
+|||.++ .| +++|++++++++++.+.. .....+++.+.+.+.++.++|+.-... ...+.++++.+.+
T Consensus 233 ~s~SK~~~~~G-lRiG~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 305 (391)
T PRK08361 233 NSFSKTFAMTG-WRLGFVIAPEQVIKDMIK------LHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLV 305 (391)
T ss_pred ecCchhcCCcH-hhhhhhccCHHHHHHHHH------HHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHH
Confidence 6899887 45 899999999998887654 112234556778888888877421111 1233344444445
Q ss_pred HHHHHcccCCCceeeeeceeEE-EEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCcccCHH
Q psy8199 562 TKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNKN 632 (965)
Q Consensus 562 ~~~L~~l~~~~~i~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~t~~ 632 (965)
.+.|+. .+++....+.|.+ +++.+. ..+. ...++.+.|. ++||.+.|+ .+++|++ +..+++
T Consensus 306 ~~~L~~---~~~~~~~~p~g~~~~~~~l~-~~~~----~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~~ 375 (391)
T PRK08361 306 LKRLKE---MPHIKVFEPKGAFYVFANID-ETGM----SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRIS--YATSKE 375 (391)
T ss_pred HHHHHh---CCCCeecCCCEEEEEEEECC-CCCC----CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEE--ecCCHH
Confidence 555544 3455555666654 444553 1111 1335666665 579999873 2589999 556788
Q ss_pred HHHHHHHhhhccc
Q psy8199 633 EIQHMTSAIFQTF 645 (965)
Q Consensus 633 ~i~~~~~~l~~~~ 645 (965)
+++++++++.+.+
T Consensus 376 ~l~~al~~l~~~l 388 (391)
T PRK08361 376 KLIEAMERMEKAL 388 (391)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888776543
No 247
>PRK14330 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.80 E-value=2e-18 Score=196.77 Aligned_cols=184 Identities=15% Similarity=0.204 Sum_probs=150.9
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCc---ccHHHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKD---RDLDNIENMICEV 759 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~---~~~~~~~~~~~~i 759 (965)
+.+.+ ++|||++|.||..+...+ +++.+++++|+++++.+.+.|++++.|++....... .+...+.++++.+
T Consensus 142 ~~v~i-~rGC~~~CsFC~ip~~~G----~~rsr~~e~Iv~Ei~~l~~~g~kei~l~~~n~~~yg~~~~~~~~l~~Ll~~~ 216 (434)
T PRK14330 142 AWVTI-IYGCNRFCTYCIVPYTRG----REKSRPMEDILEEVEKLAKQGYREVTFLGQNVDAYGKDLKDGSSLAKLLEEA 216 (434)
T ss_pred EEEEc-ccCCCCCCCCCceECcCC----CCccCCHHHHHHHHHHHHHCCCcEEEEEEecccccccCCCCCccHHHHHHHH
Confidence 45777 899999999999765332 245689999999999999999999999875432110 1123455666555
Q ss_pred Hh-cCcE-eE---EecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceeee
Q psy8199 760 KK-IGLE-TC---LTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICCG 829 (965)
Q Consensus 760 ~~-~~~~-i~---~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~ 829 (965)
.+ .++. +. .++..++++.++.|+++| +.++++++|| +++.++.|+++++.+++.++++.+++. |+.+.++
T Consensus 217 ~~~~~~~~~~~~~~~p~~~~~ell~~l~~~~~~~~~l~iglQSgsd~vLk~M~R~~~~~~~~~~i~~lr~~~~~i~i~~d 296 (434)
T PRK14330 217 SKIEGIERIWFLTSYPTDFSDELIEVIANSPKVAKSIHLPVQSGSNRILKLMNRRYTREEYLELIEKIRSKVPDASISSD 296 (434)
T ss_pred HhcCCceEEEEecCChhhcCHHHHHHHhcCCcccCceecCcCCCCHHHHHhcCCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 43 2332 21 244667899999999998 7899999999 999999999999999999999999996 7889999
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG 873 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~ 873 (965)
+|+|+ |||.+++.++++++.+++ ++.+.++.|.|.||||+++
T Consensus 297 ~IvGfPgET~edf~~tl~fi~~~~--~~~~~~~~~sp~pGT~~~~ 339 (434)
T PRK14330 297 IIVGFPTETEEDFMETVDLVEKAQ--FERLNLAIYSPREGTVAWK 339 (434)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcC--CCEEeeeeccCCCCChhhh
Confidence 99999 799999999999999999 9999999999999999987
No 248
>PRK14338 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.80 E-value=2.7e-18 Score=196.11 Aligned_cols=186 Identities=13% Similarity=0.205 Sum_probs=155.3
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcc---cHHHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDR---DLDNIENMICEV 759 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~---~~~~~~~~~~~i 759 (965)
..+.+ ++|||++|.||..+...+ +.+.+++++|+++++.+.+.|+++|.|++........ ..+.+.++++.+
T Consensus 157 ~~i~I-~rGC~~~CsfC~~p~~~G----~~rsr~~e~Il~ei~~l~~~G~keI~l~g~~~~~yG~d~~~~~~l~~Ll~~l 231 (459)
T PRK14338 157 VHVPI-IYGCNMSCSYCVIPLRRG----RERSRPLAEIVEEVRRIAARGAKEITLLGQIVDSYGHDLPGRPDLADLLEAV 231 (459)
T ss_pred EEEEc-ccCCCCCCCcCCeeccCC----CCccCCHHHHHHHHHHHHHCCCeEEEEeeecCCCcccccCChHHHHHHHHHH
Confidence 45667 899999999998765322 2456799999999999999999999998853221111 134577788877
Q ss_pred Hhc-Cc---Ee-EEecCCCCHHHHHHHHHh--CCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCceeee
Q psy8199 760 KKI-GL---ET-CLTLGMLNENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINICCG 829 (965)
Q Consensus 760 ~~~-~~---~i-~~~~~~~~~e~l~~Lk~a--G~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~ 829 (965)
.+. ++ .+ +.++..++++.++.|++. |+.++++++|| ++++++.|+++++.+++.++++.+++. |+.+.++
T Consensus 232 ~~~~gi~~ir~~~~~p~~i~~ell~~l~~~~~~~~~v~lglQSgsd~vLk~m~R~~t~e~~~~~i~~lr~~~pgi~i~~d 311 (459)
T PRK14338 232 HEIPGLERLRFLTSHPAWMTDRLIHAVARLPKCCPHINLPVQAGDDEVLKRMRRGYTVARYRELIARIREAIPDVSLTTD 311 (459)
T ss_pred HhcCCcceEEEEecChhhcCHHHHHHHhcccccccceecCcccCCHHHHHhccCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 763 43 33 336678899999999995 58999999999 999999999999999999999999998 7889999
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS 875 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~ 875 (965)
+|+|+ |||.+|+.++++++.+++ ++.+.++.|.|.|||+++..+
T Consensus 312 ~IvG~PgET~ed~~~ti~~l~~l~--~~~v~i~~ysp~pGT~~~~~~ 356 (459)
T PRK14338 312 IIVGHPGETEEQFQRTYDLLEEIR--FDKVHIAAYSPRPGTLAAEME 356 (459)
T ss_pred EEEECCCCCHHHHHHHHHHHHHcC--CCEeEEEecCCCCCChhhhCc
Confidence 99999 799999999999999999 899999999999999998754
No 249
>PRK08207 coproporphyrinogen III oxidase; Provisional
Probab=99.80 E-value=3.8e-18 Score=193.99 Aligned_cols=201 Identities=19% Similarity=0.235 Sum_probs=156.7
Q ss_pred CCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH------CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc-
Q psy8199 690 GGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS------DGATRFCMGAAWRELKDRDLDNIENMICEVKKI- 762 (965)
Q Consensus 690 ~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~------~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~- 762 (965)
..||.+|.||+|+.............-.+.++++++...+ .++..+.|.||.. ...+.+.+.++++.+++.
T Consensus 171 PFC~~~C~YCsf~s~~~~~~~~~~~~Y~~aL~~EI~~~~~~~~~~~~~v~tIyfGGGTP--t~L~~~~L~~Ll~~i~~~f 248 (488)
T PRK08207 171 PFCPTRCLYCSFPSYPIKGYKGLVEPYLEALHYEIEEIGKYLKEKGLKITTIYFGGGTP--TSLTAEELERLLEEIYENF 248 (488)
T ss_pred CCCCCcCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHhhhcccCCceeEEEEeCCCc--cCCCHHHHHHHHHHHHHhc
Confidence 6799999999988642111111000124556666654432 2466788866643 334566667777666542
Q ss_pred ----Cc-EeEE---ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCC-ceeeeEEE
Q psy8199 763 ----GL-ETCL---TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGI-NICCGGII 832 (965)
Q Consensus 763 ----~~-~i~~---~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi-~v~~~~i~ 832 (965)
++ .+++ ++..++++.++.|+++|++++++|+|| ++++++.+.+.+++++..++++.++++|+ .+++.+|+
T Consensus 249 ~~~~~~~EiTvE~grPd~it~e~L~~Lk~~Gv~RISIGvQS~~d~vLk~igR~ht~e~v~~ai~~ar~~Gf~~In~DLI~ 328 (488)
T PRK08207 249 PDVKNVKEFTVEAGRPDTITEEKLEVLKKYGVDRISINPQTMNDETLKAIGRHHTVEDIIEKFHLAREMGFDNINMDLII 328 (488)
T ss_pred cccCCceEEEEEcCCCCCCCHHHHHHHHhcCCCeEEEcCCcCCHHHHHHhCCCCCHHHHHHHHHHHHhCCCCeEEEEEEe
Confidence 22 4444 566899999999999999999999999 99999999999999999999999999999 89999999
Q ss_pred ec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC----CCCCCHHHHHHHHHHHHHHCC
Q psy8199 833 GL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG----SSILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 833 Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~----~~~~~~~~~~~~ia~~R~~lp 894 (965)
|+ |||.+++.++++.+.+++ ++.++++.+.|.|||++.. ...++.++..+++..++..+.
T Consensus 329 GLPgEt~ed~~~tl~~l~~L~--pd~isv~~L~i~~gT~l~~~~~~~~~~~~~~~~~m~~~a~~~l~ 393 (488)
T PRK08207 329 GLPGEGLEEVKHTLEEIEKLN--PESLTVHTLAIKRASRLTENKEKYKVADREEIEKMMEEAEEWAK 393 (488)
T ss_pred CCCCCCHHHHHHHHHHHHhcC--cCEEEEEeceEcCCChHHHhcCcCCCcCHHHHHHHHHHHHHHHH
Confidence 99 799999999999999999 9999999999999999974 235677888888888887764
No 250
>PRK07683 aminotransferase A; Validated
Probab=99.80 E-value=1.8e-17 Score=187.91 Aligned_cols=335 Identities=14% Similarity=0.105 Sum_probs=208.3
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcC--CCCC-eEEEcCChhHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEV 329 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~-~v~~~~sGseA~~~ 329 (965)
..++|+..|.+. ++ .++.+.+++.+.++.. ..|....+..+.+..+++.+.+..+ .+.+ ++++++|+++|+..
T Consensus 28 ~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQPD--FP-TPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 467888776432 33 3678899999887652 2232233456666777777765433 2456 89999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
+++.... +++.|++..++|.++.......+. .+..++....... .|.+
T Consensus 105 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~-----------~~~~ 152 (387)
T PRK07683 105 AFRTILE--------PGTEVILPAPIYPGYEPIIRLCGA-------------KPVFIDTRSTGFR-----------LTAE 152 (387)
T ss_pred HHHHhCC--------CCCEEEEcCCCccchHHHHHHcCC-------------EEEEeecCcccCC-----------CCHH
Confidence 9876532 567899999999887433322221 2333333211110 2457
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccccc-CCCccee-
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA-EIWPDFL- 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~-~~~pDiv- 487 (965)
++++.+.+ ++.+|++.. ++|++|.+. +.+.+++|.++|+++|+++|+||+|..+...+.......+ +...+++
T Consensus 153 ~l~~~~~~---~~~~i~i~~-p~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~ 227 (387)
T PRK07683 153 ALENAITE---KTRCVVLPY-PSNPTGVTL-SKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIV 227 (387)
T ss_pred HHHHhcCc---CceEEEEeC-CCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEE
Confidence 77777642 334444443 489999866 7777999999999999999999999876433322121112 2222333
Q ss_pred --eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHH
Q psy8199 488 --CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKIT 562 (965)
Q Consensus 488 --t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~ 562 (965)
+|||.++ .| +++|++++++++++.+.. .......+.+.+++.++.+.|+.-.. +...++++++.+.+.
T Consensus 228 ~~s~SK~~~~pG-lRiG~i~~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (387)
T PRK07683 228 INGLSKSHSMTG-WRIGFLFAPSYLAKHILK------VHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVY 300 (387)
T ss_pred EeeccccccCcc-ceeEEEEcCHHHHHHHHH------HHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 6899887 45 899999999999888764 11112234567788888777752111 123444555666666
Q ss_pred HHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHH-HHHcCcEEeec-------CCEEEEeCCcccCHHHH
Q psy8199 563 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVA-ALKNELLLRPI-------GNTVYLMPPYILNKNEI 634 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~-------~~~lR~~p~~~~t~~~i 634 (965)
+.|.+. ++....+.|.++.+......... ...+... +.++||.+.|+ .+++|++ +..+++++
T Consensus 301 ~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~--~~~~~~~~ 370 (387)
T PRK07683 301 NRLISM----GLDVEKPTGAFYLFPSIGHFTMS----SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLS--YAYSIETL 370 (387)
T ss_pred HHHHHc----CCcccCCCeeEEEEEecccCCCC----HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEE--ecCCHHHH
Confidence 666543 34444566665544432011111 2234444 56789999873 2689999 55688888
Q ss_pred HHHHHhhhccc
Q psy8199 635 QHMTSAIFQTF 645 (965)
Q Consensus 635 ~~~~~~l~~~~ 645 (965)
.++++++.+.+
T Consensus 371 ~~al~~l~~~l 381 (387)
T PRK07683 371 KEGLDRLEAFL 381 (387)
T ss_pred HHHHHHHHHHH
Confidence 88888887543
No 251
>KOG0259|consensus
Probab=99.80 E-value=2.5e-17 Score=169.60 Aligned_cols=338 Identities=15% Similarity=0.097 Sum_probs=217.3
Q ss_pred ccccccccchhccCCC--CCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcCC--CCCeEEEcCChhHHHH
Q psy8199 255 RYLDAISSWWVNLFGH--SNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQY--KLGHCFYGSDGASAVE 328 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh--~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA~~ 328 (965)
.+|-+..|-. ..+|- ..++..+||.+++..+ ..|..+.+....+.+.|+++.+..+. ..+.|++|+|.++|++
T Consensus 62 ~iipl~~GDP-sv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 62 PILPLGHGDP-SVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred eeccCCCCCC-CccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 5555544433 22221 3678899999998764 34455556667778888887776653 3569999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEec-CCCCCCCCCCCChhHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT-TPDSRNINKGNSANEIARCA 407 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d 407 (965)
.|+.+..+ ++..|+...++|.-|...+....= ++.... .|+.... .|
T Consensus 141 ~~i~~LA~--------p~aNILlPrPGfp~Y~~~a~~~~l-------------EVR~ydlLPe~~we-----------ID 188 (447)
T KOG0259|consen 141 LAISSLAN--------PGANILLPRPGFPLYDTRAIYSGL-------------EVRYYDLLPEKDWE-----------ID 188 (447)
T ss_pred HHHHHhcC--------CCCceecCCCCCchHHHhhhhcCc-------------eeEeecccCcccce-----------ec
Confidence 99996643 667899999999776332222110 111111 1211111 48
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-ccccccc-CCCcc
Q psy8199 408 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHA-EIWPD 485 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~-~~~pD 485 (965)
++.+|+++++ .++|.||++| +|+.|.+. +.+-|++|.++|+++|+++|+||||..+-.-++ +.....+ .+.|-
T Consensus 189 L~~veal~DE--NT~AivviNP--~NPcGnVy-s~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPV 263 (447)
T KOG0259|consen 189 LDGVEALADE--NTVAIVVINP--NNPCGNVY-SEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPV 263 (447)
T ss_pred hHHHHHhhcc--CeeEEEEeCC--CCCCcccc-cHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCce
Confidence 9999999874 4567777887 78888765 888899999999999999999999987644444 3334444 33443
Q ss_pred ee--eeccccCCCcccceeeeecH--------HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc---cHHH
Q psy8199 486 FL--CLSKGITGGYLPLSLVMTTD--------KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD---NILQ 552 (965)
Q Consensus 486 iv--t~sK~l~gG~~pig~v~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~---~~~~ 552 (965)
+. .+||++---+|++|+++..+ .+.+.+.. + ..-+-+.+.+-|+|.-..|+.-.++ .-..
T Consensus 264 itlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~------~-~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~ 336 (447)
T KOG0259|consen 264 ITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKN------F-LDIIPGPATIIQGALPDILEKTPEEFFDKKLS 336 (447)
T ss_pred EeecccccccccCCceeeeEEEecccccccchHHHHHHHH------H-HhccCCccHhHHHHhHHHHHhChHHHHHHHHH
Confidence 33 36897644339999987643 22233322 1 1233344566666666666543221 1234
Q ss_pred HHHHHHHHHHHHHHcccCCCcee-eeeceeEEEEEEEeec----CccchhhHHHHHHHHH-HHcCcEEeecC-----CEE
Q psy8199 553 RISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIE----DPEQIETFSKKFFVAA-LKNELLLRPIG-----NTV 621 (965)
Q Consensus 553 ~~~~~~~~l~~~L~~l~~~~~i~-~v~g~G~~~~i~~~~~----~~~~~~~~~~~~~~~l-~~~Gi~~~~~~-----~~l 621 (965)
.++.+.+.--+.|++ .|++. .++++|.|+.+.-... +-+... .|+..| .|+.+++-|+. |++
T Consensus 337 ~lk~na~l~y~~Lk~---IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~----dFc~kL~~Eesv~~LPG~af~~~nw~ 409 (447)
T KOG0259|consen 337 FLKSNADLCYSRLKD---IPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDV----DFCQKLAREESVICLPGQAFGLKNWL 409 (447)
T ss_pred HHHhhHHHHHHHHhc---CCCcccCcCCCcceEEEeccchhhhccccccH----HHHHHHhhhcceEEeccccccCCCeE
Confidence 445555555555554 58887 8899999887753310 111112 344444 47889888853 899
Q ss_pred EEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 622 YLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 622 R~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
|++ ++...+.++++++++++...
T Consensus 410 Ri~--i~~~~~~leea~~Rik~Fc~ 432 (447)
T KOG0259|consen 410 RIV--ITVEEEMLEEAFSRIKEFCD 432 (447)
T ss_pred EEE--EccChHHHHHHHHHHHHHHH
Confidence 999 88999999999999987443
No 252
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.80 E-value=9.6e-18 Score=188.44 Aligned_cols=303 Identities=14% Similarity=0.120 Sum_probs=189.6
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 334 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a 334 (965)
..+|+..+ .++++ .+|.+.+++.+.+.....|. .....+|.+.+++.++.+.++|++++|+++++..+++..
T Consensus 23 ~~i~l~~~--~n~~~-~~~~~~~a~~~~~~~~~~Y~-----~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l 94 (360)
T PRK07392 23 AILDFSAS--INPLG-PPESVIAAIQSALSALRHYP-----DPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGREL 94 (360)
T ss_pred cEEEeCCc--CCCCC-CCHHHHHHHHHHHHHhhcCC-----CcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh
Confidence 56887655 35566 67899999988776543332 222346667777777767889999999999999888764
Q ss_pred HHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy8199 335 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 414 (965)
Q Consensus 335 ~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 414 (965)
.+++.|++.+++|.++...+...+. .+..+|........ ....+++++++.
T Consensus 95 ---------~~g~~vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~-------~~~~~~~~~~~~ 145 (360)
T PRK07392 95 ---------AQLRAVYLITPAFGDYRRALRAFGA-------------TVKELPLPLDQPSP-------GLTLRLQTLPPQ 145 (360)
T ss_pred ---------CCCCeEEEECCCcHHHHHHHHHcCC-------------eEEEEecccccCCc-------ccccCHHHHHHh
Confidence 2346899999999888544333322 22333322111000 000134444433
Q ss_pred HHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccc-ccccCCCccee---eec
Q psy8199 415 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPDFL---CLS 490 (965)
Q Consensus 415 l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~~~pDiv---t~s 490 (965)
. ......++++| +|++|.+.+ .++|.++++++++ +|+||+|..|...+.... ....+-.+.++ +||
T Consensus 146 ~---~~~~~~~l~nP--~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~S 215 (360)
T PRK07392 146 L---TPNDGLLLNNP--HNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLT 215 (360)
T ss_pred c---cCCCEEEEeCC--CCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEech
Confidence 2 23345566666 999999886 4467788888885 666999998854443211 11122234444 689
Q ss_pred cccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHcc
Q psy8199 491 KGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSL 568 (965)
Q Consensus 491 K~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~l 568 (965)
|.++ .| +++|++++++++++.+.. ....++.+.+++.++.++|+.-. .+...+.++++.+++.+.|+.
T Consensus 216 K~~~l~G-lRiG~~v~~~~~~~~~~~--------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~- 285 (360)
T PRK07392 216 KFYSLPG-LRLGYAIAHPDRLQRWQQ--------WRDPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLAS- 285 (360)
T ss_pred hhhcCCc-hheeeeeCCHHHHHHHHh--------hCCCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 9887 56 899999999999888764 11346678999999988885211 111233455556666666654
Q ss_pred cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHH-HHcCcEEeecC-------CEEEEe
Q psy8199 569 ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPIG-------NTVYLM 624 (965)
Q Consensus 569 ~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~-------~~lR~~ 624 (965)
.+++....+.|.++.+.+. . ...++.+.+ .++||.+.|+. +++|++
T Consensus 286 --~~~~~~~~~~~~fl~~~~~-~-------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~ 339 (360)
T PRK07392 286 --LPGLTPLPSAANFLLVQSQ-G-------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVA 339 (360)
T ss_pred --CCCcEECCCCCCEEEEEcC-C-------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEE
Confidence 3455444555667666553 1 134566665 56799998742 589999
No 253
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.80 E-value=1e-17 Score=185.52 Aligned_cols=299 Identities=10% Similarity=0.074 Sum_probs=196.3
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 333 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~ 333 (965)
..++|+.++. +++|...+.+.+ ..+.. |+... .+|.+.+++.++ .++|++++|+++|+..++.+
T Consensus 20 ~~~i~l~~ne--~p~~~~~~~~~~---~~~~~--------yp~~~-~~Lr~~ia~~~~--~~~I~it~Gs~~al~~~~~~ 83 (330)
T PRK05664 20 ADWLDLSTGI--APWPWPVPAIPA---DAWAR--------LPETD-DGLEAAARAYYG--APQLLPVAGSQAAIQALPRL 83 (330)
T ss_pred HHheeecCCc--CCCCCCCcccCH---HHHHh--------CCCCh-HHHHHHHHHHhC--CCCEEECcCHHHHHHHHHHc
Confidence 4678888774 677876554432 12222 22222 577888888884 58999999999999877531
Q ss_pred HHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy8199 334 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 413 (965)
Q Consensus 334 a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 413 (965)
.++++|++.+++|.++...+...+. .+..+| ++++++
T Consensus 84 ----------~~gd~v~v~~P~y~~~~~~~~~~g~-------------~~~~v~--------------------~~~~~~ 120 (330)
T PRK05664 84 ----------RAPGRVGVLSPCYAEHAHAWRRAGH-------------QVRELD--------------------EAEVEA 120 (330)
T ss_pred ----------cCCCEEEEcCCChHHHHHHHHHcCC-------------eEEEec--------------------hhhHhh
Confidence 2567899999999888443333222 222322 134555
Q ss_pred HHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---eec
Q psy8199 414 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLS 490 (965)
Q Consensus 414 ~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~s 490 (965)
++. .....++++| +|++|.+. +.+.+++|.++|+++|+++|.||+|..+.... +...+.-.++++ +||
T Consensus 121 ~~~---~~~~v~l~nP--~NPTG~~~-s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~---s~~~~~~~~~vi~~~SfS 191 (330)
T PRK05664 121 ALD---SLDVLVVVNP--NNPTGRRF-DPARLLAWHARLAARGGWLVVDEAFMDNTPQH---SLAACAHRPGLIVLRSFG 191 (330)
T ss_pred hhc---CCCEEEEeCC--cCCCCCcc-CHHHHHHHHHHHHhcCCEEEEECCcccCCCcc---cccccccCCCEEEEeecc
Confidence 553 1225677888 79999877 67779999999999999999999998663211 111222234444 689
Q ss_pred cccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHcc
Q psy8199 491 KGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSL 568 (965)
Q Consensus 491 K~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~l 568 (965)
|.++ .| +++|++++++++++.+.. ...+++.+.+++.++.++|+... .+...+.++++.+++.+.|++.
T Consensus 192 K~~gl~G-lRiG~~v~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 192 KFFGLAG-ARLGFVLAEPALLRALAE--------LLGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH 262 (330)
T ss_pred ccccCCC-cceEEEEeCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9887 56 899999999999988865 12345667888888888886321 1234566666777777777654
Q ss_pred cCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC--CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 569 ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 569 ~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
++....+.++++.+.+. + ...+.+.|.++||.+++.+ +++|++. ..+.++.+++.++++..
T Consensus 263 ----~~~~~~~~~~f~~~~~~--~-------~~~~~~~l~~~gi~v~~f~~~~~iRis~--~~~~~~~~~l~~al~~~ 325 (330)
T PRK05664 263 ----GLTPAGGCALFQWVRTE--D-------AAALHEFLARRGILTRLFEQPASLRFGL--PADEADWARLDQALLAY 325 (330)
T ss_pred ----CCcccCCcceEEEEecC--C-------HHHHHHHHHHCCeEEEECCCCCeEEEEC--CCCHHHHHHHHHHHHHH
Confidence 22222233345544431 1 3467788999999998753 6899993 33667788777776543
No 254
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.80 E-value=2e-17 Score=188.22 Aligned_cols=335 Identities=12% Similarity=0.042 Sum_probs=211.3
Q ss_pred EecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcC----CCCC-eEEEcCCh
Q psy8199 249 ITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ----YKLG-HCFYGSDG 323 (965)
Q Consensus 249 ~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~~-~v~~~~sG 323 (965)
.+..|+.++|+..|.. .++ .++.+.+++.+.+.....|....+..+.+..+++.+.+..+ .+.+ ++++|+|+
T Consensus 23 ~~~~~~~~i~l~~~~p--~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga 99 (393)
T TIGR03538 23 TPPASKPPIALSIGEP--KHP-TPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT 99 (393)
T ss_pred hhhcCCCeEEecCCCC--CCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence 3456889999887743 444 47889999988776544455455566777888888877643 2443 79999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCc-eEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhH
Q psy8199 324 ASAVEVALKMSFHYWYNKGFLNK-KKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 402 (965)
Q Consensus 324 seA~~~Al~~a~~~~~~~g~~~~-~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (965)
++|+..++++... ++. ..|++.+++|.++...+...+ ..+..+|.....+..
T Consensus 100 ~~al~~~~~~l~~-------~gd~~~vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~------- 152 (393)
T TIGR03538 100 REALFAFAQAVIN-------PGQAPLVVMPNPFYQIYEGAALLAG-------------AEPYFLNCTAENGFL------- 152 (393)
T ss_pred HHHHHHHHHHHcC-------CCCcceEEecCCCCcchHHHHHhcC-------------CeEEEeeccccCCCC-------
Confidence 9999999987653 232 248889999987743222221 123334432111110
Q ss_pred HHHHHHHHHHHHHHhCCCcEEE-EEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccc--cccc---
Q psy8199 403 IARCAIFDLEILLKKNHNKIAA-IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG--KFFA--- 476 (965)
Q Consensus 403 ~~~~d~~~le~~l~~~~~~~aa-ii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G--~~~~--- 476 (965)
.|++++++++.+ ++.+ ++++| +|++|.+. +.+.+++|.++|++|++++|.||+|..+...+ ....
T Consensus 153 ---~d~~~l~~~~~~---~~k~i~l~~p--~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 223 (393)
T TIGR03538 153 ---PDFDAVPESVWR---RCQLLFVCSP--GNPTGAVL-SLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQ 223 (393)
T ss_pred ---CCHHHHHHHHhh---cceEEEEeCC--CCCcCccc-CHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHH
Confidence 256778777653 3344 44555 99999866 78889999999999999999999998764332 1111
Q ss_pred -ccccCC--Cccee---eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-ccc
Q psy8199 477 -CEHAEI--WPDFL---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDN 549 (965)
Q Consensus 477 -~~~~~~--~pDiv---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~ 549 (965)
....+. .+.++ +|||.++..++++|++++++++++.+.. .....+++.+++.+.++.+++..-+ -..
T Consensus 224 ~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 297 (393)
T TIGR03538 224 AAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLR------YRTYHGCAMPIPTQLASIAAWNDEQHVRE 297 (393)
T ss_pred hcccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHHH------HHHhhccCcCHHHHHHHHHHhcChHHHHH
Confidence 111121 23344 6899754322899999999999887764 1122345567888888887773100 011
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCceee-eeceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec----------
Q psy8199 550 ILQRISQDMKKITKALTSLITHPKIIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI---------- 617 (965)
Q Consensus 550 ~~~~~~~~~~~l~~~L~~l~~~~~i~~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~---------- 617 (965)
..+.++++.+.+.+.|++. +.. .+..|+++++.+. .+ ..++.+.++ ++||.+.|+
T Consensus 298 ~~~~~~~~~~~~~~~L~~~-----~~~~~p~gg~f~~~~~~-~~-------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~ 364 (393)
T TIGR03538 298 NRALYREKFAAVLEILGQV-----LDLELPDAGFYLWPKVP-GD-------DEAFARALYEEENVTVLPGRFLAREAEGV 364 (393)
T ss_pred HHHHHHHHHHHHHHHHHhh-----CcccCCCeeEEEEEECC-CC-------HHHHHHHHHHHCCEEEeCCccccccccCC
Confidence 2334445555555555442 122 2334556666553 11 235666765 689998653
Q ss_pred ---CCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 618 ---GNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 618 ---~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
.+++||+ +..++++++++++++.+
T Consensus 365 ~~~~~~~Ris--~~~~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 365 NPGEGRVRIA--LVAPLEECVEAAERIRS 391 (393)
T ss_pred CCCCCEEEEE--ecCCHHHHHHHHHHHHH
Confidence 2579999 55678899998888754
No 255
>PRK14337 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.80 E-value=3.4e-18 Score=194.86 Aligned_cols=192 Identities=14% Similarity=0.155 Sum_probs=156.6
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcc----cHHHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDR----DLDNIENMIC 757 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~----~~~~~~~~~~ 757 (965)
.+.+.+ ++|||++|.||..+...+ +++.+++++|+++++.+.+.|+++|.|++........ ....+.++++
T Consensus 149 ~a~v~i-~rGC~~~CsFC~ip~~rG----~~rsr~~e~Iv~Ei~~l~~~G~~eI~l~~~~~~~yg~d~~~~~~~l~~Ll~ 223 (446)
T PRK14337 149 SAFVNI-MQGCDNFCAYCIVPYTRG----RQKSRSSAAVLDECRALVDRGAREITLLGQNVNSYGQDKHGDGTSFAQLLH 223 (446)
T ss_pred EEEEEe-ccCCCCCCcCCCcccCCC----CCeeCCHHHHHHHHHHHHHCCCeEEEEEecCccccccCCCCCCccHHHHHH
Confidence 456777 899999999998764322 3456899999999999999999999998864321100 1134666777
Q ss_pred HHHhc-C---cEe-EEecCCCCHHHHHHHHHh--CCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--CCcee
Q psy8199 758 EVKKI-G---LET-CLTLGMLNENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV--GINIC 827 (965)
Q Consensus 758 ~i~~~-~---~~i-~~~~~~~~~e~l~~Lk~a--G~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~ 827 (965)
.+.+. + +.+ +.++..++++.++.|++. |+.++++++|| ++++++.|+++++.+++.++++.+++. |+.+.
T Consensus 224 ~l~~~~g~~~ir~~~~~p~~i~~ell~~l~~~~~~~~~l~iglQSgsd~vLk~M~R~~t~e~~~~~v~~lr~~~~~i~i~ 303 (446)
T PRK14337 224 KVAALPGLERLRFTTPHPKDIAPEVIEAFGELPNLCPRLHLPLQSGSDRILKAMGRKYDMARYLDIVTDLRAARPDIALT 303 (446)
T ss_pred HHHhcCCCcEEEEccCCcccCCHHHHHHHHhCCcccCeEEECCCCCCHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 66652 3 233 235667789999999994 69999999999 999999999999999999999999997 68899
Q ss_pred eeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCC-CCHH
Q psy8199 828 CGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSI-LDPL 880 (965)
Q Consensus 828 ~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~-~~~~ 880 (965)
+++|+|+ |||.+|+.++++++.+++ ++.+.++.|.|.||||.+..+. .+.+
T Consensus 304 ~d~IvG~PgET~ed~~~tl~~l~~~~--~~~~~~f~ysp~pgT~a~~~~~~v~~~ 356 (446)
T PRK14337 304 TDLIVGFPGETEEDFEQTLEAMRTVG--FASSFSFCYSDRPGTRAEMLPGKVPEE 356 (446)
T ss_pred EeEEEECCCCCHHHHHHHHHHHHhcC--CCeeEEEecCCCCCCccccCCCCCCHH
Confidence 9999999 799999999999999999 8999999999999999988643 4554
No 256
>PRK14333 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.80 E-value=1.7e-18 Score=197.63 Aligned_cols=192 Identities=11% Similarity=0.190 Sum_probs=155.5
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCC----------cccHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELK----------DRDLDNI 752 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~----------~~~~~~~ 752 (965)
..+.+ ++|||++|.||..+...+. .+.+++++|+++++.+.+.|++++.|++...... ......+
T Consensus 150 a~i~i-~~GC~~~CsFC~ip~~rG~----~rsr~~e~V~~Ei~~l~~~g~kei~l~~~~~~~yg~d~~~~~p~~~~~~~l 224 (448)
T PRK14333 150 AWVNV-IYGCNERCTYCVVPSVRGK----EQSRTPEAIRAEIEELAAQGYKEITLLGQNIDAYGRDLPGTTPEGRHQHTL 224 (448)
T ss_pred EEEEh-hcCCCCCCCCCceecccCC----CcccCHHHHHHHHHHHHHCCCcEEEEEecccchhcCCCCCccccccccccH
Confidence 45677 9999999999998754332 3457899999999999999999999976322100 0012367
Q ss_pred HHHHHHHHh-cCc---Ee-EEecCCCCHHHHHHHHHh--CCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc--
Q psy8199 753 ENMICEVKK-IGL---ET-CLTLGMLNENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV-- 822 (965)
Q Consensus 753 ~~~~~~i~~-~~~---~i-~~~~~~~~~e~l~~Lk~a--G~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~-- 822 (965)
.++++.+.+ .++ .+ +.++..++++.++.|+++ |+.++++++|| ++++++.|++.++.+++.++++.++++
T Consensus 225 ~~Ll~~i~~~~~~~rir~~~~~p~~~~~eli~~~~~~~~~~~~l~igiQSgsd~vLk~m~R~~t~e~~~~~i~~lr~~~p 304 (448)
T PRK14333 225 TDLLYYIHDVEGIERIRFATSHPRYFTERLIKACAELPKVCEHFHIPFQSGDNEILKAMARGYTHEKYRRIIDKIREYMP 304 (448)
T ss_pred HHHHHHHHhcCCCeEEEECCCChhhhhHHHHHHHhcCCcccccccCCCccCCHHHHHhcCCCCCHHHHHHHHHHHHHhCC
Confidence 777777766 232 22 224566789999999996 58999999999 999999999999999999999999999
Q ss_pred CCceeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-CCCHHH
Q psy8199 823 GINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPLE 881 (965)
Q Consensus 823 Gi~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-~~~~~~ 881 (965)
|+.+.+++|+|+ |||.+++.++++++++++ ++.+.++.|.|.||||++..+ ..+.+.
T Consensus 305 ~i~i~~d~IvGfPgET~edf~~tl~~l~~~~--~~~~~~~~~sp~pGT~~~~~~~~v~~~~ 363 (448)
T PRK14333 305 DASISADAIVGFPGETEAQFENTLKLVEEIG--FDQLNTAAYSPRPGTPAALWDNQLSEEV 363 (448)
T ss_pred CcEEEeeEEEECCCCCHHHHHHHHHHHHHcC--CCEEeeeeeecCCCCchhhCCCCCCHHH
Confidence 778999999999 799999999999999999 899999999999999998753 345543
No 257
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=1.2e-17 Score=185.12 Aligned_cols=313 Identities=12% Similarity=0.104 Sum_probs=201.1
Q ss_pred EEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcC---CCCCeEEEcCChh
Q psy8199 248 LITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGA 324 (965)
Q Consensus 248 ~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~~~v~~~~sGs 324 (965)
-+...|+..+|+..| .+++| .+|.+++++.+.+..... ..|+.....+|.+.+++.++ .+.++|++|+|++
T Consensus 13 ~~~~~~~~~i~l~~~--~~~~~-~p~~~~~~~~~~~~~~~~---~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~ 86 (335)
T PRK14808 13 PYETEKRDRTYLALN--ENPFP-FPEDLVDEVFRRLNSDTL---RIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86 (335)
T ss_pred CCCCCCCceeEecCC--CCCCC-CCHHHHHHHHHHhhhhhh---hcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHH
Confidence 344577889998776 34566 578899999887654211 11222234455566666554 4678999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
+++..+++.. +.|++.+++|.++...+...+. .+..+|......
T Consensus 87 ~~i~~~~~~~------------d~v~v~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~----------- 130 (335)
T PRK14808 87 EIIYVMMLMF------------DRSVFFPPTYSCYRIFAKAVGA-------------KFLEVPLTKDLR----------- 130 (335)
T ss_pred HHHHHHHHHh------------CcEEECCCCHHHHHHHHHHcCC-------------eEEEecCCCcCC-----------
Confidence 9999888744 3489999999888544444332 223333321100
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCc
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 484 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 484 (965)
++.. .+. .....++++| +|++|.+.+ .+.+ .+++ ++++++|+||+|..|. +..+. ....-.+
T Consensus 131 ---~~~~--~~~---~~~~i~i~nP--~NPTG~~~s-~~~l---~~l~-~~~~~ii~DE~Y~~f~--~~~~~-~~~~~~~ 192 (335)
T PRK14808 131 ---IPEV--NVG---EGDVVFIPNP--NNPTGHVFE-REEI---ERIL-KTGAFVALDEAYYEFH--GESYV-DLLKKYE 192 (335)
T ss_pred ---CChh--Hcc---CCCEEEEeCC--CCCCCCCcC-HHHH---HHHH-hcCCEEEEECchhhhc--CCchH-HHHHhCC
Confidence 0011 111 2335566666 999998875 4434 4445 5899999999998873 22111 1111123
Q ss_pred cee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHH
Q psy8199 485 DFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMK 559 (965)
Q Consensus 485 Div---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~~~~~~ 559 (965)
+++ +|||.++ .| +++|++++++++++.+.. .. .+++.+.+++.++.++|+..+. .+..+.+++..+
T Consensus 193 ~vi~~~S~SK~~~l~G-lRvG~~v~~~~~~~~l~~------~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~ 263 (335)
T PRK14808 193 NLAVIRTFSKAFSLAA-QRIGYVVSSEKFIDAYNR------VR--LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERE 263 (335)
T ss_pred CEEEEEechhhccCcc-cceEEEEeCHHHHHHHHH------hc--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 444 6899887 45 899999999999988865 11 3466678888888888863211 122344455555
Q ss_pred HHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHH
Q psy8199 560 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTS 639 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~ 639 (965)
++.+.|+++ ++....+.|.|+.+.+. .. ....+.+.|.++||+++...+.+|++ ..+.++.+++++
T Consensus 264 ~l~~~L~~~----g~~~~~~~g~f~~~~l~-~~------~~~~~~~~l~~~Gi~V~~~~~~~Ris---i~~~~~~~~~~~ 329 (335)
T PRK14808 264 RMKSALREM----GYRITDSRGNFVFIFME-KE------EKERLLEHLRAKNIAVRSFREGVRIT---IGKREENDMILK 329 (335)
T ss_pred HHHHHHHHC----CCEECCCCCeEEEEeCC-Cc------cHHHHHHHHHHCCeEEEECCCCeEEe---cCCHHHHHHHHH
Confidence 666666553 34555678998887764 11 12467788999999999877889999 667788888888
Q ss_pred hhhc
Q psy8199 640 AIFQ 643 (965)
Q Consensus 640 ~l~~ 643 (965)
++.+
T Consensus 330 ~l~~ 333 (335)
T PRK14808 330 ELEV 333 (335)
T ss_pred HHHh
Confidence 7753
No 258
>PRK08175 aminotransferase; Validated
Probab=99.80 E-value=2.6e-17 Score=187.30 Aligned_cols=339 Identities=14% Similarity=0.096 Sum_probs=213.1
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcCC--CCC-eEEEcCChhHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQY--KLG-HCFYGSDGASAV 327 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~--~~~-~v~~~~sGseA~ 327 (965)
|+.++|+..| .+.+..+|.+.+++.+.+... ..|....+..+.+..+++.+.+..+. ..+ ++++|+|+++++
T Consensus 28 ~~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMG---NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 6788998776 344445777888888776432 22333344556677777777665432 345 799999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 407 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 407 (965)
..++..... ++++|++.+++|..+.......+ .....+|..... .+
T Consensus 105 ~~~~~~~~~--------~gd~Vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~-------------~~ 150 (395)
T PRK08175 105 AHLMLATLD--------HGDTVLVPNPSYPIHIYGAVIAG-------------AQVRSVPLVEGV-------------DF 150 (395)
T ss_pred HHHHHHhCC--------CCCEEEEcCCCCcchHHHHHHcC-------------CeEEEEecccCC-------------Cc
Confidence 888775532 56889999999977643322211 122333332110 13
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-cccccCCCcce
Q psy8199 408 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIWPDF 486 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~~~pDi 486 (965)
.+++++++++...++.+|++.. ++|++|.+. +.+.+++|.++|++||+++|+||+|..+-..+... ......-.+|.
T Consensus 151 ~~~l~~~l~~~~~~~~~v~i~~-p~NPtG~~~-~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~ 228 (395)
T PRK08175 151 FNELERAIRESYPKPKMMILGF-PSNPTAQCV-ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDV 228 (395)
T ss_pred HHHHHHHHhhccCCceEEEEeC-CCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccC
Confidence 5777777765434566666664 489999766 77779999999999999999999998763333211 11111111232
Q ss_pred ----eeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHH
Q psy8199 487 ----LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKK 560 (965)
Q Consensus 487 ----vt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~ 560 (965)
-+|||.++..++++|++++++++++.+.. ......++.+++++.++.++|+..+. +.+.+.++++.+.
T Consensus 229 ~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (395)
T PRK08175 229 AVEFFTLSKSYNMAGWRIGFMVGNPELVSALAR------IKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDV 302 (395)
T ss_pred EEEEeeccccccCcchhheeeeCCHHHHHHHHH------HHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 36899986433899999999999988765 12223455667788888777752111 1234445555666
Q ss_pred HHHHHHcccCCCceeeeec-eeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCcccCH
Q psy8199 561 ITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNK 631 (965)
Q Consensus 561 l~~~L~~l~~~~~i~~v~g-~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~t~ 631 (965)
+.+.|+.+ ++....+ .|+++.+++. +... ......+++.+. +.||.+.|+ .+++||+ +..++
T Consensus 303 ~~~~L~~~----~~~~~~p~~g~~i~i~l~--~~~~-~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis--~~~~~ 373 (395)
T PRK08175 303 LVKGLHEA----GWMVEMPKASMYVWAKIP--EPYA-AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFA--LIENR 373 (395)
T ss_pred HHHHHHHc----CCcccCCCEEEEEEEECC--cccC-CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEE--eCCCH
Confidence 66666554 3333333 5777777765 2100 001345666655 789999874 2589998 44678
Q ss_pred HHHHHHHHhhhccc
Q psy8199 632 NEIQHMTSAIFQTF 645 (965)
Q Consensus 632 ~~i~~~~~~l~~~~ 645 (965)
+.+.++++++.+.+
T Consensus 374 ~~~~~al~~l~~~l 387 (395)
T PRK08175 374 DRIRQAIRGIKAMF 387 (395)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888876544
No 259
>PRK03321 putative aminotransferase; Provisional
Probab=99.80 E-value=3.5e-18 Score=191.70 Aligned_cols=315 Identities=14% Similarity=0.136 Sum_probs=203.8
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 334 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a 334 (965)
.++|+..+. ..+| .+|.+.+++.+.+..... ++.....++.+.++++++.+.+++++++|.++++..++...
T Consensus 23 ~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~-----y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~ 94 (352)
T PRK03321 23 GAIKLSSNE--TPFG-PLPSVRAAIARAAAGVNR-----YPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQAT 94 (352)
T ss_pred cceeccCCC--CCCC-CCHHHHHHHHHHHHhcCc-----CCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHh
Confidence 478887663 3355 467899999877665432 23345677888888887666779999998888888777654
Q ss_pred HHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy8199 335 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 414 (965)
Q Consensus 335 ~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 414 (965)
. .+++.|++..++|..+....... | .....+|.... .. .|+++++++
T Consensus 95 ~--------~~gd~Vli~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~-~~-----------~~~~~l~~~ 141 (352)
T PRK03321 95 A--------GPGDEVIFAWRSFEAYPILVQVA-G------------ATPVQVPLTPD-HT-----------HDLDAMAAA 141 (352)
T ss_pred c--------CCCCEEEeCCCCHHHHHHHHHHc-C------------CEEEEccCCCC-CC-----------CCHHHHHHh
Confidence 3 25678988888875442111111 1 12233333211 11 267888887
Q ss_pred HHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHh--cCCeEEEeccccCCCccccc-ccccccCCCccee---e
Q psy8199 415 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN--YNIHLIADEIAVGCGRTGKF-FACEHAEIWPDFL---C 488 (965)
Q Consensus 415 l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tg~gr~G~~-~~~~~~~~~pDiv---t 488 (965)
++. ++.+|++.. ++|++|.+.+ .+++.++|++ +++++|+||+|.+|...+.. .+.......++++ +
T Consensus 142 ~~~---~~~~v~l~~-p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S 213 (352)
T PRK03321 142 ITD---RTRLIFVCN-PNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRT 213 (352)
T ss_pred hcc---CCCEEEEeC-CCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEec
Confidence 753 334444444 5899998876 4455555554 69999999999877544321 1222223345666 6
Q ss_pred eccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHHHH
Q psy8199 489 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL---QRISQDMKKITKA 564 (965)
Q Consensus 489 ~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~---~~~~~~~~~l~~~ 564 (965)
|||.++ .| +++|++++++++++.+.. ...+++.+++++.++.++|+.. +.+. +++.+..+++.+.
T Consensus 214 ~SK~~g~~G-lRiG~~v~~~~~~~~~~~--------~~~~~~~s~~~q~~a~~~l~~~--~~~~~~~~~~~~~r~~~~~~ 282 (352)
T PRK03321 214 FSKAYGLAG-LRVGYAVGHPEVIAALRK--------VAVPFSVNSLAQAAAIASLAAE--DELLERVDAVVAERDRVRAA 282 (352)
T ss_pred chHHhhhHH-HhhhhhcCCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHH
Confidence 899987 45 899999999999998875 2346778999999998888522 2232 3333334455555
Q ss_pred HHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 565 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 565 L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
|++. ++...++.|.++.+.+. + .+..+.+.|.++||.+.+.+ +.+|++ ..+.++.+++++++..
T Consensus 283 L~~~----~~~~~~~~g~~i~i~l~--~------~~~~~~~~l~~~gI~v~~~~~~~iRi~---~~~~~~~~~~~~al~~ 347 (352)
T PRK03321 283 LRAA----GWTVPPSQANFVWLPLG--E------RTADFAAAAAEAGVVVRPFAGEGVRVT---IGAPEENDAFLRAARA 347 (352)
T ss_pred HHHC----CCccCCCCCCEEEEeCC--C------CHHHHHHHHHHCCEEEEccCCCcEEEe---eCCHHHHHHHHHHHHH
Confidence 5443 33333456887777653 1 13467788899999999864 579999 4688889998888765
Q ss_pred c
Q psy8199 644 T 644 (965)
Q Consensus 644 ~ 644 (965)
.
T Consensus 348 ~ 348 (352)
T PRK03321 348 W 348 (352)
T ss_pred H
Confidence 4
No 260
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.80 E-value=1.7e-17 Score=189.46 Aligned_cols=341 Identities=13% Similarity=0.062 Sum_probs=206.0
Q ss_pred Ccccccccccchhc--cCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhc-CCCCCeEEEcCChhHHH
Q psy8199 253 GKRYLDAISSWWVN--LFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLT-QYKLGHCFYGSDGASAV 327 (965)
Q Consensus 253 G~~ylD~~~~~~~~--~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~-~~~~~~v~~~~sGseA~ 327 (965)
|+.++++..|.... .++ .++.+.+++.+.+... ..|....+..+....+++.+.+.. ....++|++++|+++|+
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 57788888775422 233 4788999998877652 112222333444555555554321 13457899999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARC 406 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 406 (965)
..++.+... +++.|++.+++|..+.......+ ..+..++.+.. ... .
T Consensus 109 ~~~~~~l~~--------~gd~v~i~~P~y~~~~~~~~~~g-------------~~v~~~~~~~~~~~~-----------~ 156 (401)
T TIGR01264 109 EMCIAALAN--------AGQNILVPRPGFPLYETLAESMG-------------IEVKLYNLLPDKSWE-----------I 156 (401)
T ss_pred HHHHHHhCC--------CCCEEEEeCCCChhHHHHHHHcC-------------CEEEEeecCCccCCC-----------C
Confidence 999886643 56789999999977632222211 12233332211 111 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc-
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD- 485 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD- 485 (965)
|++++++.+.+ +..+|++.. ++|++|.+. +.+.+++|.++|+++|+++|+||+|..|-..+..+. ....+.++
T Consensus 157 d~~~l~~~~~~---~~~~v~~~~-p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~ 230 (401)
T TIGR01264 157 DLKQLESLIDE---KTAALIVNN-PSNPCGSVF-SRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFE-PLASLSSTV 230 (401)
T ss_pred CHHHHHHHhcc---CceEEEEcC-CCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccc-cHHHcCCCC
Confidence 67788877753 234444433 489999866 677899999999999999999999998754443111 11122232
Q ss_pred -ee---eeccccCCCcccceeeeecH------HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc---ccHHH
Q psy8199 486 -FL---CLSKGITGGYLPLSLVMTTD------KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNILQ 552 (965)
Q Consensus 486 -iv---t~sK~l~gG~~pig~v~~~~------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~---~~~~~ 552 (965)
++ +|||.++..++++|++++++ ++++.+.. . ...+++.+++++.++.+.|+...+ +...+
T Consensus 231 ~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~ 303 (401)
T TIGR01264 231 PILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVK------L-SQRILGPCTIVQGALPSILLRTPQEYFDGTLS 303 (401)
T ss_pred cEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHH------H-hhccCCCCcHHHHHHHHHHHhCcHHHHHHHHH
Confidence 43 68997443238999999863 34444432 1 112345678899988888853111 12344
Q ss_pred HHHHHHHHHHHHHHcccCCCceeee-eceeEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeecC-----CEEEEeC
Q psy8199 553 RISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPIG-----NTVYLMP 625 (965)
Q Consensus 553 ~~~~~~~~l~~~L~~l~~~~~i~~v-~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~-----~~lR~~p 625 (965)
.++++.+++.+.|+++ +++..+ +..|+|+.+.+. ............+.+.++ ++||++.|+. +++|++
T Consensus 304 ~~~~~r~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~-~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis- 378 (401)
T TIGR01264 304 VLESNAMLCYGALAAV---PGLRPVMPSGAMYMMVGIE-MEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVV- 378 (401)
T ss_pred HHHHHHHHHHHHHHhC---CCCcccCCCeeeEEEEEec-ccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEE-
Confidence 4555555666666543 444433 445677777663 100000001335666665 7899998742 689999
Q ss_pred CcccCHHHHHHHHHhhhccc
Q psy8199 626 PYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 626 ~~~~t~~~i~~~~~~l~~~~ 645 (965)
+...++++++.++++.+.+
T Consensus 379 -~~~~~~~l~~~l~rl~~~~ 397 (401)
T TIGR01264 379 -LTVPVVMMEEACSRIQEFC 397 (401)
T ss_pred -EcCCHHHHHHHHHHHHHHH
Confidence 5567888998888876543
No 261
>PRK14334 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=99.80 E-value=4.2e-18 Score=193.98 Aligned_cols=194 Identities=14% Similarity=0.186 Sum_probs=153.2
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCC---CcccHHHHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWREL---KDRDLDNIENMICE 758 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~---~~~~~~~~~~~~~~ 758 (965)
...+.+ ++||+++|.||..+...+. .+.+++++|+++++.+.+.|+++|.|++..... .......+.++++.
T Consensus 139 ~~~l~i-srGC~~~CsfC~~p~~~g~----~~sr~~e~Iv~Ei~~l~~~G~keI~l~g~~~~~yG~d~~~~~~~~~Ll~~ 213 (440)
T PRK14334 139 SAHLTI-MRGCNHHCTYCIVPTTRGP----EVSRHPDLILRELELLKAAGVQEVTLLGQNVNSYGVDQPGFPSFAELLRL 213 (440)
T ss_pred EEEEEe-ccCCCCCCcCCCcchhcCC----CccCCHHHHHHHHHHHHHCCCeEEEEEeccccccccCCCCcCCHHHHHHH
Confidence 456677 9999999999988753222 234789999999999999999999997732110 00011234455555
Q ss_pred HHhcCc---EeEE-ecCCCCHHHHHHHHHh--CCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCC--ceeee
Q psy8199 759 VKKIGL---ETCL-TLGMLNENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGI--NICCG 829 (965)
Q Consensus 759 i~~~~~---~i~~-~~~~~~~e~l~~Lk~a--G~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi--~v~~~ 829 (965)
+.+.++ .+.. ++..++++.++.|+++ |+.++++++|| ++++++.|++.++.+++.++++.++++|. .+.+.
T Consensus 214 l~~~~i~~ir~~~~~p~~i~~ell~~l~~~~~g~~~l~igvQSgs~~vLk~m~R~~~~~~~~~~v~~lr~~~~~i~i~~d 293 (440)
T PRK14334 214 VGASGIPRVKFTTSHPMNFTDDVIAAMAETPAVCEYIHLPVQSGSDRVLRRMAREYRREKYLERIAEIREALPDVVLSTD 293 (440)
T ss_pred HHhcCCcEEEEccCCcccCCHHHHHHHHhcCcCCCeEEeccccCCHHHHHHhCCCCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 544443 3322 5677899999999994 59999999999 99999999999999999999999999975 46789
Q ss_pred EEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC-CCCCHHHH
Q psy8199 830 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS-SILDPLEF 882 (965)
Q Consensus 830 ~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~-~~~~~~~~ 882 (965)
+|+|+ |||.+++.++++++.+++ ++.+.++.|.|.||||++.. ...++++.
T Consensus 294 ~IvG~PgEt~ed~~~tl~~i~~l~--~~~i~~f~ysp~pGT~~~~~~~~v~~~~~ 346 (440)
T PRK14334 294 IIVGFPGETEEDFQETLSLYDEVG--YDSAYMFIYSPRPGTPSYKHFQDLPREVK 346 (440)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcC--CCEeeeeEeeCCCCChhHhccCCCCHHHH
Confidence 99999 799999999999999999 99999999999999999764 34555443
No 262
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.80 E-value=1.4e-17 Score=188.76 Aligned_cols=333 Identities=11% Similarity=0.059 Sum_probs=205.2
Q ss_pred cccccccchhccCCCCCHHHHHHHHHHHhhccccccCCC-----CcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHH
Q psy8199 256 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-----THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 330 (965)
Q Consensus 256 ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~A 330 (965)
|||..+... .++.|.+|+.+.+........... ..+...++.+.++++++...++++|++||++|+..+
T Consensus 2 yld~aa~~~------~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~a 75 (379)
T TIGR03402 2 YLDNNATTR------VDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTA 75 (379)
T ss_pred cCCCcCCCC------CCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHH
Confidence 888776533 689999999988764211110111 123456777889999987778999999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHH
Q psy8199 331 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 410 (965)
Q Consensus 331 l~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 410 (965)
++.+.... ++++.|++....|++.......+ ......+..+|.+.. +. .|+++
T Consensus 76 l~~~~~~~-----~~~~~vv~~~~~~~s~~~~~~~~----------~~~G~~v~~v~~~~~-g~-----------~~~~~ 128 (379)
T TIGR03402 76 IKSALAAQ-----PEKRHIITTAVEHPAVLSLCQHL----------EKQGYKVTYLPVDEE-GR-----------LDLEE 128 (379)
T ss_pred HHHHHHhc-----CCCCeEEEcccccHHHHHHHHHH----------HHcCCEEEEEccCCC-Cc-----------CCHHH
Confidence 98765421 34466776666665431111000 001123444444221 11 36788
Q ss_pred HHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec
Q psy8199 411 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS 490 (965)
Q Consensus 411 le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s 490 (965)
++++++ +++.+|++.. +++++|.+.| +++|.++|++||+++|+|++|+ +|.. ..+.....+|++++|
T Consensus 129 l~~~i~---~~~~lv~i~~-~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~----~~~~~~~~~D~~~~s 195 (379)
T TIGR03402 129 LRAAIT---DDTALVSVMW-ANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI----PIDLKEMNIDMLSLS 195 (379)
T ss_pred HHHhcC---CCcEEEEEEc-ccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cccc----ccCcccCCCCEEEEc
Confidence 888885 3456677766 7899999887 7899999999999999999996 5432 223334568999998
Q ss_pred --cccCCCcccceeeeecHHHH-HhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHH
Q psy8199 491 --KGITGGYLPLSLVMTTDKIY-NSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKAL 565 (965)
Q Consensus 491 --K~l~gG~~pig~v~~~~~i~-~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~~~L 565 (965)
| +.|. ..+|+++.+++.. .....++........+ +.|..+..+..++++.+.+ +...++.+++.+++++.|
T Consensus 196 ~~K-~~gp-~G~g~l~v~~~~~~~p~~~g~~~~~~~~~g--t~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l 271 (379)
T TIGR03402 196 GHK-LHGP-KGVGALYIRKGTRFRPLLRGGHQERGRRAG--TENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGL 271 (379)
T ss_pred HHH-cCCC-CceEEEEECCCCCCCCcccCCccCCCcCCC--CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 9 6553 4688888776541 1111101100011122 3456666777777776643 223456666666777666
Q ss_pred HcccCCCceeeeec---e-eEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec------------------------
Q psy8199 566 TSLITHPKIINFRQ---K-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------------------------ 617 (965)
Q Consensus 566 ~~l~~~~~i~~v~g---~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------------------ 617 (965)
.+ ..+++..... . ..++.+.+. .. ....+...|.++||.++.+
T Consensus 272 ~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~ 342 (379)
T TIGR03402 272 LA--RIPDARLNGDPTKRLPNTVNISFE--YI-----EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAA 342 (379)
T ss_pred Hh--hCCCEEEeCCCccCCCCEEEEEec--CC-----CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhc
Confidence 53 1233321111 1 123333332 10 1235777788899998742
Q ss_pred CCEEEEeCCcccCHHHHHHHHHhhhccccc
Q psy8199 618 GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 618 ~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~ 647 (965)
.+.+|++++...|++||+++++.+.+.+..
T Consensus 343 ~~~vR~S~~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 343 HGSIRFSLSRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 257999999999999999999998875543
No 263
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.79 E-value=4.3e-17 Score=169.85 Aligned_cols=324 Identities=14% Similarity=0.144 Sum_probs=220.0
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCC--CCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceE
Q psy8199 271 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY--KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 348 (965)
Q Consensus 271 ~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~ 348 (965)
.+|+|.+|+++.++.+... .+....+....+.....+.... ..+.++|+++.--++..+|+.... +++.
T Consensus 39 ~pp~i~~Al~~rvdhGvfG-Y~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~--------~gd~ 109 (388)
T COG1168 39 TPPEIIEALRERVDHGVFG-YPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK--------PGDG 109 (388)
T ss_pred CCHHHHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc--------CCCe
Confidence 5799999999999886322 2333444677888888877653 456899999999999999988754 6788
Q ss_pred EEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCC--CCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEE
Q psy8199 349 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAII 426 (965)
Q Consensus 349 vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii 426 (965)
|++..|.||.. ..+....++. +...|.-. .... .|+++||+++.+ ......|+
T Consensus 110 Vvi~tPvY~PF-~~~i~~n~R~------------~i~~pL~~~~~~y~-----------iD~~~LE~~~~~-~~vkl~iL 164 (388)
T COG1168 110 VVIQTPVYPPF-YNAIKLNGRK------------VIENPLVEDDGRYE-----------IDFDALEKAFVD-ERVKLFIL 164 (388)
T ss_pred eEecCCCchHH-HHHHhhcCcE------------EEeccccccCCcEE-----------ecHHHHHHHHhc-CCccEEEE
Confidence 99999999876 2333333322 22222211 1111 389999999974 22357888
Q ss_pred EccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccc-ccccccccC--CCcceeee---ccccCCCcccc
Q psy8199 427 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG-KFFACEHAE--IWPDFLCL---SKGITGGYLPL 500 (965)
Q Consensus 427 ~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G-~~~~~~~~~--~~pDivt~---sK~l~gG~~pi 500 (965)
|+| +|++|.+ ++.+.|.+|.+||.+||+++|+||++..+-..| +++.+...+ ..-..+|+ ||++.-.++..
T Consensus 165 CnP--HNP~Grv-wt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~ 241 (388)
T COG1168 165 CNP--HNPTGRV-WTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKC 241 (388)
T ss_pred eCC--CCCCCcc-ccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhh
Confidence 888 8888865 599999999999999999999999999886667 444443322 22233433 78764322788
Q ss_pred eeeee-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHcccCCCceeee
Q psy8199 501 SLVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKALTSLITHPKIINF 577 (965)
Q Consensus 501 g~v~~-~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v 577 (965)
++++. ++++-+.+.+. ....+..+.|.+++.|..++.+.-+. +.+.+.++.+.+++.+.+.+ ..|.+...
T Consensus 242 a~~Ii~n~~lr~~~~~~-----l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~--~~P~v~v~ 314 (388)
T COG1168 242 AYIIISNRELRAKFLKR-----LKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNK--HLPGVKVT 314 (388)
T ss_pred eeEEecCHHHHHHHHHH-----HHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh--hCCCcEEe
Confidence 87665 45553444331 12234456789999999999975432 45778888889998888865 35788888
Q ss_pred eceeEEEEE-EEeecCccchhhHHHHHHHHHH-HcCcEEee------cC-CEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 578 RQKGMIWAF-DVIIEDPEQIETFSKKFFVAAL-KNELLLRP------IG-NTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 578 ~g~G~~~~i-~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~------~~-~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
.++|..+.+ ++. .-+-+ ..++.+.|+ +.+|.+.+ .| +++|+. ++.+.+.++++++++..++
T Consensus 315 ~p~gTYL~WLD~r-~l~l~----d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~ri~~al 384 (388)
T COG1168 315 EPQGTYLAWLDCR-ELGLD----DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALERLKRAL 384 (388)
T ss_pred cCCCceeeeeecc-ccCCC----hHHHHHHHHHhhcEeccCCCccCcCCCceEEEe--cCCCHHHHHHHHHHHHHHH
Confidence 899986554 443 11111 123444444 45666654 23 789999 8899999999999887554
No 264
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=9.1e-18 Score=188.60 Aligned_cols=316 Identities=13% Similarity=0.129 Sum_probs=200.5
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhh-ccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNK-LEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al 331 (965)
++.++|+.+|.. +++ .+|.+.+++.+.+.. ..+ |+.....+|.+.++++++.+.++|++|+|+++|+..++
T Consensus 23 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~~-----y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~ 94 (353)
T PRK05387 23 LAKLIKLNTNEN--PYP-PSPKVLEAIRAALGDDLRL-----YPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAF 94 (353)
T ss_pred ccceeeccCCCC--CCC-CCHHHHHHHHHHhhhhhhc-----CCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHH
Confidence 356889887743 455 378899999887654 222 23333467778888877777789999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
+...+ +++.|++.+++|..+.......+ ..+..+|..... . .|++++
T Consensus 95 ~~l~~--------~gd~vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~-~-----------~d~~~l 141 (353)
T PRK05387 95 LAFFN--------HDRPLLFPDITYSFYPVYAGLYG-------------IPYEEIPLDDDF-S-----------IDVEDY 141 (353)
T ss_pred HHhcC--------CCCEEEEeCCCHHHHHHHHHHcC-------------CEEEEeecCCCC-C-----------CCHHHH
Confidence 87643 56889999999966632221111 123333332111 1 245555
Q ss_pred HHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhc-CCeEEEeccccCCCcccccccccccCCCccee---
Q psy8199 412 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY-NIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--- 487 (965)
Q Consensus 412 e~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--- 487 (965)
++ .....++++| +|++|.+.+ . +++.++++.+ ++++|+||+|..|+. .. .....+..++++
T Consensus 142 ~~------~~~~v~~~~P--~NPtG~~~~-~---~~~~~l~~~~~~~~livDe~y~~~~~--~~-~~~~~~~~~~~i~~~ 206 (353)
T PRK05387 142 LR------PNGGIIFPNP--NAPTGIALP-L---AEIERILAANPDSVVVIDEAYVDFGG--ES-AIPLIDRYPNLLVVQ 206 (353)
T ss_pred Hh------cCCEEEEeCC--CCCCCCCCC-H---HHHHHHHHhCCCcEEEEeCcccccCC--cc-hHHHHhhCCCEEEEE
Confidence 42 1234566677 999998875 3 4444444443 999999999987742 11 111112223333
Q ss_pred eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHH
Q psy8199 488 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKAL 565 (965)
Q Consensus 488 t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L 565 (965)
+|||.++ .| +++|++++++++++.+..-. ....+++.+.+++.++.++|+..+ -++..+++.++.+++.+.|
T Consensus 207 S~SK~~~~~G-lR~G~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 280 (353)
T PRK05387 207 TFSKSRSLAG-LRVGFAIGHPELIEALNRVK-----NSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEEL 280 (353)
T ss_pred ehhHhhcchh-hhceeeecCHHHHHHHHHhh-----ccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899886 45 89999999999988876510 111355678889988888884211 1234555666666677766
Q ss_pred HcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-----CEEEEeCCcccCHHHHHHHHHh
Q psy8199 566 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-----NTVYLMPPYILNKNEIQHMTSA 640 (965)
Q Consensus 566 ~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~lR~~p~~~~t~~~i~~~~~~ 640 (965)
++. ++...++.|.++.+.+. . .....+.+.|.++||.+++.+ +++|++. .+.+++++++++
T Consensus 281 ~~~----g~~~~~~~~~~~~~~~~--~-----~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~---~~~~~~~~~~~~ 346 (353)
T PRK05387 281 EAL----GFEVLPSKANFVFARHP--S-----HDAAELAAKLRERGIIVRHFNKPRIDQFLRITI---GTDEEMEALVDA 346 (353)
T ss_pred HHC----CCeECCCcCcEEEEECC--C-----CCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHHHHHHHHHH
Confidence 654 33333445556555442 1 113467788899999997542 5899993 367889998888
Q ss_pred hhcc
Q psy8199 641 IFQT 644 (965)
Q Consensus 641 l~~~ 644 (965)
+.+.
T Consensus 347 L~~~ 350 (353)
T PRK05387 347 LKEI 350 (353)
T ss_pred HHHH
Confidence 7653
No 265
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.79 E-value=3e-17 Score=187.51 Aligned_cols=334 Identities=15% Similarity=0.146 Sum_probs=205.6
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhh-cCCCCCeEEEcCChhHHHHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL-TQYKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~-~~~~~~~v~~~~sGseA~~~Al 331 (965)
|..++|+..|.. .++ .++.+.+++.+.......|....+..+.+..+++.+... .+.+.++|++++||++|+..++
T Consensus 29 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~ 105 (397)
T PRK07568 29 GIKVYHLNIGQP--DIK-TPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAM 105 (397)
T ss_pred CCCEEEecCCCC--CCC-CCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHH
Confidence 445777766643 223 367888888766544323333334455556666655421 1235679999999999999988
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
.... .++++|++.+++|..+....... ...+..++.....+ +...++++|
T Consensus 106 ~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~g---------~~~~~~~~l 155 (397)
T PRK07568 106 MAIC--------DPGDEILVPEPFYANYNGFATSA-------------GVKIVPVTTKIEEG---------FHLPSKEEI 155 (397)
T ss_pred HHhc--------CCCCEEEEecCCCccHHHHHHHc-------------CCEEEEeecCcccC---------CCCCCHHHH
Confidence 7653 25678999999887653221111 11223333211000 000145778
Q ss_pred HHHHHhCCCcEEEE-EEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccc-cccCCCccee-
Q psy8199 412 EILLKKNHNKIAAI-IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FAC-EHAEIWPDFL- 487 (965)
Q Consensus 412 e~~l~~~~~~~aai-i~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~-~~~~~~pDiv- 487 (965)
++++.+ ++.+| ++.| +|++|.+. +.+.+++|.++|+++|+++|+||+|.+|...+.. ... ...+..++++
T Consensus 156 ~~~~~~---~~~~v~i~~p--~NPtG~~~-~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~ 229 (397)
T PRK07568 156 EKLITP---KTKAILISNP--GNPTGVVY-TKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVII 229 (397)
T ss_pred HHhcCc---cceEEEEECC--CCCCCccC-CHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEE
Confidence 777742 34445 4555 88899765 6777999999999999999999999988655532 122 2223334555
Q ss_pred --eeccccCC-Ccccceeeeec-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHH
Q psy8199 488 --CLSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKI 561 (965)
Q Consensus 488 --t~sK~l~g-G~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l 561 (965)
+|||.++. | +++|+++++ +++++.+.. . ...+++.+++++.++.++|+..++ +.+.+.++++.+.+
T Consensus 230 ~~S~SK~~~~~G-~R~G~~~~~~~~~~~~~~~------~-~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (397)
T PRK07568 230 IDSVSKRYSACG-ARIGCLISKNKELIAAAMK------L-CQARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDIL 301 (397)
T ss_pred EecchhhccCCC-cceEEEecCCHHHHHHHHH------H-hhccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 68999875 5 899999984 678776654 1 112456778888888888753111 12344455566666
Q ss_pred HHHHHcccCCCceeeeeceeEE-EEEEEeecCccchhhHHHHHHHHHHH------cCcEEeec----------CCEEEEe
Q psy8199 562 TKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAALK------NELLLRPI----------GNTVYLM 624 (965)
Q Consensus 562 ~~~L~~l~~~~~i~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~l~~------~Gi~~~~~----------~~~lR~~ 624 (965)
.+.|+++ +++....+.|.+ +.+.+. . . ....+.+.+.+ .||.+.|+ .+++|++
T Consensus 302 ~~~L~~~---~~~~~~~p~g~~~~~~~l~--~-~----~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls 371 (397)
T PRK07568 302 YEELNKI---PGVVCEKPKGAFYIIAKLP--V-D----DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIA 371 (397)
T ss_pred HHHHhcC---CCceecCCCcceEEEEecC--C-C----CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEE
Confidence 6666543 445545556655 455553 1 1 13345566654 69998873 1589999
Q ss_pred CCcccCHHHHHHHHHhhhccc
Q psy8199 625 PPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 625 p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+..+.++++++++++.+.+
T Consensus 372 --~~~~~~~~~~~~~~l~~~l 390 (397)
T PRK07568 372 --YVLNEEDLKRAMEILKEAL 390 (397)
T ss_pred --EeCCHHHHHHHHHHHHHHH
Confidence 5567899999998887544
No 266
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.79 E-value=2.3e-17 Score=186.83 Aligned_cols=320 Identities=13% Similarity=0.051 Sum_probs=201.9
Q ss_pred CCCHHHHHHHHHHHhhcccccc-CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceE
Q psy8199 270 HSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 348 (965)
Q Consensus 270 h~~p~v~~av~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~ 348 (965)
|.+|++++++.+++........ .........++++.++++++...+.+++++||++|+..+++.++... ..++++
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~----~~~~~~ 106 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLA----KAEKPN 106 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhc----cCCCce
Confidence 4789999999998865311111 11223334788899999987555578999999999999999886531 113567
Q ss_pred EEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEc
Q psy8199 349 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 428 (965)
Q Consensus 349 vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~e 428 (965)
|++.+.++..+...+ ......+..+|.+... ..|+++|++++++ .....+++.
T Consensus 107 vl~~~~~h~s~~~~~-------------~~~g~~~~~v~~~~~~------------~~d~~~l~~~i~~--~~~~vi~~~ 159 (371)
T PRK13520 107 IVVPESAHFSFDKAA-------------DMLGVELRRAPLDDDY------------RVDVKAVEDLIDD--NTIGIVGIA 159 (371)
T ss_pred EEecCcchHHHHHHH-------------HHcCceEEEecCCCCC------------cCCHHHHHHHHhh--CCEEEEEEc
Confidence 888876654331111 1111234445543211 1378999998863 222333344
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCC----cccccccccccCCCcceeeec--cccCCCccccee
Q psy8199 429 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG----RTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSL 502 (965)
Q Consensus 429 p~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g----r~G~~~~~~~~~~~pDivt~s--K~l~gG~~pig~ 502 (965)
+ ++++|.+.| +++|.++|++||+++|+||+|+++. +.+..+..... ..|.+++| |.+.+| +|+|+
T Consensus 160 ~--~~~tG~~~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~--~vd~~~~s~~K~~~a~-~~~G~ 230 (371)
T PRK13520 160 G--TTELGQVDP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP--GVDSITIDPHKMGLAP-IPAGG 230 (371)
T ss_pred C--CcCCcccCC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCC--CCceEEECCccccCcc-CCceE
Confidence 4 678898887 9999999999999999999998652 11111122212 34666653 533334 68987
Q ss_pred eee-cHHHHHhhhccCCc----ccccccCCCCCCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHcccCCCce
Q psy8199 503 VMT-TDKIYNSIYYKNNI----NIFLHSHSYSGNPLACCAALATLEIFNKDN---ILQRISQDMKKITKALTSLITHPKI 574 (965)
Q Consensus 503 v~~-~~~i~~~~~~~~~~----~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~i 574 (965)
++. ++++++.+....+. ..+.+.+|. ++..++++.++|+.+.+++ ..++..++.+++.+.|+++ ++
T Consensus 231 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~--~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~ 304 (371)
T PRK13520 231 ILFRDESYLDALAVDTPYLTSKKQATLTGTR--SGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER----GF 304 (371)
T ss_pred EEEcCHHHHHhhcccCccccCCCCcceEeec--cChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC----CC
Confidence 775 55577665421000 001112233 3345777888888765443 6677788888888888765 23
Q ss_pred e-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC--CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 575 I-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 575 ~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
. .+.+...++.+.+. + ...+.+.|.++||.+.+.. +.+|++++..+++++++.+++.+.+.
T Consensus 305 ~~~~~~~~~~v~~~~~--~-------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~ 368 (371)
T PRK13520 305 EPVIEPVLNIVAFDDP--N-------PDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEV 368 (371)
T ss_pred EEecCCCceEEEEecC--C-------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
Confidence 2 23344556655542 1 3467788999999987653 67999988889999999999988754
No 267
>PRK07337 aminotransferase; Validated
Probab=99.79 E-value=2.5e-17 Score=187.16 Aligned_cols=336 Identities=13% Similarity=0.055 Sum_probs=209.1
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhh-ccccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNK-LEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEV 329 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~ 329 (965)
|..++|+..+.. .++ .+|.+.+++.+.+.. ...|....+..+.+..+++.+.+..+ ...+++++++|+++|+..
T Consensus 29 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~ 105 (388)
T PRK07337 29 GRDIIHMGIGEP--DFT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLL 105 (388)
T ss_pred CCCEEEeCCcCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHH
Confidence 445677766643 233 368889999887754 22233333445666777777765544 256789999999999998
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAI 408 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ 408 (965)
++..... +++.|++.+++|.++.......+. .+..+|.... .+. .|+
T Consensus 106 ~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~-----------~~~ 153 (388)
T PRK07337 106 ACLALVE--------RGDEVLMPDPSYPCNRHFVAAAEG-------------RPVLVPSGPAERFQ-----------LTA 153 (388)
T ss_pred HHHHhcC--------CCCEEEEeCCCchhhHHHHHHcCC-------------EEEEeecCCccCCc-----------CCH
Confidence 8876532 568899999999876332222111 2233333210 111 256
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee-
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL- 487 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv- 487 (965)
+++++.+.. ...+.+++.| +|++|.+. +.+.+++|.++|++||+++|+||+|.+|...+..... ....++++
T Consensus 154 ~~l~~~~~~--~~~~v~l~~p--~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~vi~ 226 (388)
T PRK07337 154 ADVEAAWGE--RTRGVLLASP--SNPTGTSI-APDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA--LSLGDDVIT 226 (388)
T ss_pred HHHHhhcCc--cceEEEEECC--CCCCCcCc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcCh--hhccCCEEE
Confidence 788877752 3344455555 88999766 6778999999999999999999999887544432111 12335655
Q ss_pred --eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh---cccHHHHHHHHHHHHH
Q psy8199 488 --CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN---KDNILQRISQDMKKIT 562 (965)
Q Consensus 488 --t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~---~~~~~~~~~~~~~~l~ 562 (965)
+|||.++..++++|++++++++++.+.. .......+.+++++.++.++++.-. -....+.++++.+++.
T Consensus 227 ~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~ 300 (388)
T PRK07337 227 INSFSKYFNMTGWRLGWLVVPEALVGTFEK------LAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIV 300 (388)
T ss_pred EEechhhcCCchhheeeeecCHHHHHHHHH------HHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHH
Confidence 5799886322899999999998887764 1222334567888888877774110 0123444555666666
Q ss_pred HHHHcccCCCcee-ee-eceeEEEEEEEeecCccchhhHHHHHHHH-HHHcCcEEeec--------CCEEEEeCCcccCH
Q psy8199 563 KALTSLITHPKII-NF-RQKGMIWAFDVIIEDPEQIETFSKKFFVA-ALKNELLLRPI--------GNTVYLMPPYILNK 631 (965)
Q Consensus 563 ~~L~~l~~~~~i~-~v-~g~G~~~~i~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~--------~~~lR~~p~~~~t~ 631 (965)
+.|+++ ++. .+ +..|+++++++. ............+.+. +.++||.+.|+ .+++|++ +..++
T Consensus 301 ~~L~~~----~~~~~~~p~~g~f~~~~~~-~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~--~~~~~ 373 (388)
T PRK07337 301 PALESL----GFKVPVMPDGAFYVYADCR-GVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLS--YATSM 373 (388)
T ss_pred HHHHhc----CCccccCCCeeEEEEEecc-cccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEE--ecCCH
Confidence 666553 222 12 334667777764 1000000113356655 45789999763 2589999 45578
Q ss_pred HHHHHHHHhhhc
Q psy8199 632 NEIQHMTSAIFQ 643 (965)
Q Consensus 632 ~~i~~~~~~l~~ 643 (965)
+.+.+.++++.+
T Consensus 374 ~~l~~~l~rl~~ 385 (388)
T PRK07337 374 SRLEEAVARLGK 385 (388)
T ss_pred HHHHHHHHHHHH
Confidence 888888887764
No 268
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.79 E-value=1.7e-17 Score=187.33 Aligned_cols=333 Identities=14% Similarity=0.131 Sum_probs=207.8
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHh-hc-cccccCCCCcHHHHHHHHHHHhhcC------CCCC-eEEEcCChhH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLN-KL-EHVMLSNLTHKPVIKLSEKLSSLTQ------YKLG-HCFYGSDGAS 325 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~-~~-~~~~~~~~~~~~~~~la~~l~~~~~------~~~~-~v~~~~sGse 325 (965)
+.||+.++ ...+++++|.+.+++.+..+ .. ........+.....+|.+.++++++ .+.+ .+++++|..+
T Consensus 2 ~~I~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSN--APLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSS--STSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECC--CCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 46787776 34455566666666655443 11 1111122233345666666666654 4566 7777776666
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
++..++.+... .+++.|++.+++|.++.......+. .+..+|....... .
T Consensus 80 ~~~~~~~~~~~-------~~~~~vlv~~P~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~----------~ 129 (363)
T PF00155_consen 80 ALFLLLRLLKI-------NPGDTVLVPDPCYPSYIEAARLLGA-------------EVIPVPLDSENDF----------H 129 (363)
T ss_dssp HHHHHHHHHHS-------STTSEEEEEESSSTHHHHHHHHTTS-------------EEEEEEEEETTTT----------E
T ss_pred chhhhhhcccc-------cccccceecCCccccccccccccCc-------------eeeeccccccccc----------c
Confidence 66666655521 3568899999999887333222221 2223331100011 1
Q ss_pred HHHHHHHHHHHhC-CC--cEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-c-cccc
Q psy8199 406 CAIFDLEILLKKN-HN--KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-A-CEHA 480 (965)
Q Consensus 406 ~d~~~le~~l~~~-~~--~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~-~~~~ 480 (965)
.|+++|++.+++. .+ +..+|++.. ++|++|... +.+.+++|.++|++||+++|+||+|..+......+ . ....
T Consensus 130 ~d~~~l~~~l~~~~~~~~~~~~v~~~~-p~nPtG~~~-~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 207 (363)
T PF00155_consen 130 LDPEALEEALDELPSKGPRPKAVLICN-PNNPTGSVL-SLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLL 207 (363)
T ss_dssp ETHHHHHHHHHTSHTTTETEEEEEEES-SBTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHH
T ss_pred ccccccccccccccccccccceeeecc-ccccccccc-ccccccchhhhhcccccceeeeeceeccccCCCccCcccccc
Confidence 4789999999864 22 345666666 699999866 77779999999999999999999998764332211 1 2222
Q ss_pred CCCccee---eeccccCC-CcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-----ccHH
Q psy8199 481 EIWPDFL---CLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-----DNIL 551 (965)
Q Consensus 481 ~~~pDiv---t~sK~l~g-G~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-----~~~~ 551 (965)
.-.++++ +|||+++- | +++|++++++++++.+.. ...++..+.+.++++.+.|..... +...
T Consensus 208 ~~~~~vi~~~S~SK~~g~~G-lRvG~i~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 278 (363)
T PF00155_consen 208 DEDDNVIVVGSLSKSFGLPG-LRVGYIVAPPELIERLRR--------FQRSGLSSSPMQAAAAAALSDPELVEKWLEELR 278 (363)
T ss_dssp TTTSTEEEEEESTTTTTSGG-GTEEEEEEEHHHHHHHHH--------HHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeeccccccccc-cccccccchhhhhhhhhh--------ccccccccchhhHHHHHhhhcccccccccccch
Confidence 3334433 68998863 5 899999999999988875 122333377777777777754321 3355
Q ss_pred HHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHc-CcEEeec-----CCEEEEeC
Q psy8199 552 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTVYLMP 625 (965)
Q Consensus 552 ~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~-----~~~lR~~p 625 (965)
++++++.+++.+.|++. ++....+.+.++.+... + ......+.+.|.++ ||.+.|+ .+++|++.
T Consensus 279 ~~l~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~--~----~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~ 348 (363)
T PF00155_consen 279 ERLRENRDLLREALEEI----GITVLPPEAGFFLWVRL--D----PNDAEELAQELLEEYGILVRPGSYFGVPGYIRISL 348 (363)
T ss_dssp HHHHHHHHHHHHHHHHT----TSEEEHHSBSSEEEEEE--S----HHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG
T ss_pred hhHHHHHHHHHHHHHHh----hhheeeccCccEEEEEc--c----cchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe
Confidence 66666777777777654 45555554554444432 1 11345688888887 9999984 36999996
Q ss_pred CcccCHHHHHHHHHhh
Q psy8199 626 PYILNKNEIQHMTSAI 641 (965)
Q Consensus 626 ~~~~t~~~i~~~~~~l 641 (965)
..+++++++++++++
T Consensus 349 -a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 349 -ASHSEEDLEEALERL 363 (363)
T ss_dssp -GCSCHHHHHHHHHHH
T ss_pred -ccCCHHHHHHHHhhC
Confidence 589999999999875
No 269
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.79 E-value=1.9e-17 Score=185.65 Aligned_cols=321 Identities=11% Similarity=-0.010 Sum_probs=204.6
Q ss_pred cCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcC---CCCCeEEEcCChhHHH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGASAV 327 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~~~v~~~~sGseA~ 327 (965)
..+..++|+.+|.. ....+|.+.+++.+.... ..|....+..+.+.++++.+.+..+ .+.+++++|+|+++|+
T Consensus 18 ~~~~~~i~l~~~~p---~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i 93 (357)
T TIGR03539 18 SHPDGIVDLSVGTP---VDPVPPLIRAALAAAADA-PGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELV 93 (357)
T ss_pred hCCCCeEEccCCCC---CCCCCHHHHHHHHHHHhh-CCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHH
Confidence 35667899888743 233578888888776543 2333344556777888888877643 3568999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 407 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 407 (965)
..++.++.. .+++.|++.+++|.++...+...+ ...++.+ +
T Consensus 94 ~~~~~~l~~-------~~gd~Vl~~~p~y~~~~~~~~~~g---------------~~~~~v~-----------------~ 134 (357)
T TIGR03539 94 AWLPTLLGL-------GPGDTVVIPELAYPTYEVGALLAG---------------ATPVAAD-----------------D 134 (357)
T ss_pred HHHHHHHcC-------CCCCEEEECCCCcHHHHHHHHhcC---------------CEEeccC-----------------C
Confidence 888775421 256889999999987743322221 1122221 1
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccc-ccc--cC-CC
Q psy8199 408 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEH--AE-IW 483 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~--~~-~~ 483 (965)
++.++ ..++.+|+++. ++|++|.+. +.+.+++|.++|++||+++|.||+|..|...+.... ... .+ ..
T Consensus 135 ~~~l~------~~~~~~v~~~~-p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 206 (357)
T TIGR03539 135 PTELD------PVGPDLIWLNS-PGNPTGRVL-SVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDH 206 (357)
T ss_pred hhhcC------ccCccEEEEeC-CCCCcCccC-CHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCcc
Confidence 22221 13456666665 699999876 677799999999999999999999987754443211 110 11 11
Q ss_pred ccee---eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHH
Q psy8199 484 PDFL---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMK 559 (965)
Q Consensus 484 pDiv---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~ 559 (965)
..++ +|||.++..++++|++++++++++.+.. ......++.+++++.++.++|+... .....+.++++.+
T Consensus 207 ~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (357)
T TIGR03539 207 TGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLT------VRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRA 280 (357)
T ss_pred ccEEEEeccccccCCCceeEEEEecCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 2233 6899874322899999999999887754 1222345678888888888774211 1123444455555
Q ss_pred HHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEEEeCCcccCHH
Q psy8199 560 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKN 632 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~~p~~~~t~~ 632 (965)
++.+.|++. ++...++.|.++.+... .. ....+.+.|.++||.+.|+ .+++|++. ..+++
T Consensus 281 ~~~~~L~~~----g~~~~~p~~~~~~~~~~-~~------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~--~~~~~ 347 (357)
T TIGR03539 281 QLKPALEKA----GFRIDHSEAGLYLWATR-GE------DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVAL--TATDE 347 (357)
T ss_pred HHHHHHHHc----CCCCcCCCccEEEEEEC-CC------CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEe--cCCHH
Confidence 566655543 33334455665444332 11 1335777888999999874 26899994 45788
Q ss_pred HHHHHHHhh
Q psy8199 633 EIQHMTSAI 641 (965)
Q Consensus 633 ~i~~~~~~l 641 (965)
++++.++++
T Consensus 348 ~i~~~~~~l 356 (357)
T TIGR03539 348 RIAAAVARL 356 (357)
T ss_pred HHHHHHHhh
Confidence 888888765
No 270
>PRK09265 aminotransferase AlaT; Validated
Probab=99.79 E-value=3.6e-17 Score=186.76 Aligned_cols=343 Identities=15% Similarity=0.121 Sum_probs=208.7
Q ss_pred cCCcccccccccchhccCCCC-CHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhc--CCCCCeEEEcCChhHHH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAV 327 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~~~sGseA~ 327 (965)
..|+..+|+..|.. .++++. +|++.+++.+.+.....|....+..+.++.+++.+.... +...++|++++|+++++
T Consensus 30 ~~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l 108 (404)
T PRK09265 30 EEGHKILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELI 108 (404)
T ss_pred HcCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHH
Confidence 35778899887744 356654 778999988776544334333344455666666654322 34667999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 407 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 407 (965)
..+++... .++++|++.+++|..+.......+. ....++........ .|
T Consensus 109 ~~~~~~~~--------~~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~v~~~~~~~~~~~----------~d 157 (404)
T PRK09265 109 VMAMQALL--------NNGDEVLVPAPDYPLWTAAVSLSGG-------------KPVHYLCDEEAGWF----------PD 157 (404)
T ss_pred HHHHHHhC--------CCCCEEEEeCCCCcChHHHHHHcCC-------------EEEEEecccccCCC----------CC
Confidence 99888663 2567899999999876433222221 12222221100000 25
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccccCCCcc-
Q psy8199 408 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWPD- 485 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~~~pD- 485 (965)
++++++.+.. ...+++++.| +|++|.+. +.+.+++|.++|++||+++|+||+|..|-..+.. ..... +.++
T Consensus 158 ~~~l~~~~~~--~~~~v~l~~P--~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~ 230 (404)
T PRK09265 158 LDDIRSKITP--RTKAIVIINP--NNPTGAVY-SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIAS--LAPDL 230 (404)
T ss_pred HHHHHHhccc--cceEEEEECC--CCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHH--cCCCc
Confidence 6778877742 2234555666 88999876 6777999999999999999999999877433321 11111 1222
Q ss_pred -ee---eeccccCCCcccceeeee--cHH----HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHH---
Q psy8199 486 -FL---CLSKGITGGYLPLSLVMT--TDK----IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNIL--- 551 (965)
Q Consensus 486 -iv---t~sK~l~gG~~pig~v~~--~~~----i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~--- 551 (965)
++ +|||.++..++++|++++ +++ +++.+.. ....+++.+.+++.++.++|+..+. ..+.
T Consensus 231 ~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 303 (404)
T PRK09265 231 LCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDM-------LASMRLCANVPAQHAIQTALGGYQSINELILPG 303 (404)
T ss_pred eEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHH-------HhccccCCCcHHHHHHHHHhcCchhHHHHHHHH
Confidence 33 579988542389999986 343 3333221 1123456778888888888842111 1121
Q ss_pred HHHHHHHHHHHHHHHcccCCCceeeeecee-EEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEEE
Q psy8199 552 QRISQDMKKITKALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYL 623 (965)
Q Consensus 552 ~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~ 623 (965)
+++.++.+.+.+.|++ ++++....+.| +++++.+. ..........+.+.+.+.++||.+.|+ .+++|+
T Consensus 304 ~~~~~~r~~~~~~L~~---~~~~~~~~p~~g~~l~~~~~-~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri 379 (404)
T PRK09265 304 GRLYEQRDRAWELLNA---IPGVSCVKPKGALYAFPKLD-PKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRI 379 (404)
T ss_pred HHHHHHHHHHHHHHhc---CCCCcccCCCcceEEEEEec-ccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEE
Confidence 2344555555555544 34555455554 45555553 110000111334667788999999874 258999
Q ss_pred eCCcccCHHHHHHHHHhhhccc
Q psy8199 624 MPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 624 ~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+ +..+++++++.++++.+.+
T Consensus 380 ~--~~~~~e~l~~~l~rl~~~l 399 (404)
T PRK09265 380 V--TLPRVDDLEEAIGRIGRFL 399 (404)
T ss_pred E--eCCCHHHHHHHHHHHHHHH
Confidence 9 5578899999998887644
No 271
>smart00729 Elp3 Elongator protein 3, MiaB family, Radical SAM. This superfamily contains MoaA, NifB, PqqE, coproporphyrinogen III oxidase, biotin synthase and MiaB families, and includes a representative in the eukaryotic elongator subunit, Elp-3. Some members of the family are methyltransferases.
Probab=99.79 E-value=2.2e-18 Score=179.06 Aligned_cols=185 Identities=23% Similarity=0.364 Sum_probs=150.8
Q ss_pred eEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCC-----CCEEEEeeccCCCCcc-cHHHHHHHHH
Q psy8199 684 LLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDG-----ATRFCMGAAWRELKDR-DLDNIENMIC 757 (965)
Q Consensus 684 ~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g-----~~~i~l~~g~~~~~~~-~~~~~~~~~~ 757 (965)
.+.+ |++|+++|.||......+ . .+..+++++.++++.+.+.| .+.+.+++|+..+... .+..+++.++
T Consensus 4 ~i~~-t~~C~~~C~yC~~~~~~~---~-~~~~~~e~i~~~~~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~ 78 (216)
T smart00729 4 LYII-TRGCPRRCTFCSFPSARG---K-LRSRYLEALVREIELLAEKGEKEILVGTVFIGGGTPTLLSPEQLEELLEAIR 78 (216)
T ss_pred EEEe-cCchhccCCcCCcCcccc---c-hhHHHHHHHHHHHHHHHhcccCCcceeEEEECCCCCCCCCHHHHHHHHHHHH
Confidence 4556 999999999998776431 1 44478999999999886654 4677787776543321 2344444444
Q ss_pred HHHhc----CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcC-CceeeeEE
Q psy8199 758 EVKKI----GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVG-INICCGGI 831 (965)
Q Consensus 758 ~i~~~----~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~G-i~v~~~~i 831 (965)
..... .+.+.++.+.++++.++.|+++|++.+.+++++ +++.++.++++.++++++++++.++++| +.+..+++
T Consensus 79 ~~~~~~~~~~~~~~tn~~~~~~~~~~~l~~~~~~~i~isl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~v~~~~~ 158 (216)
T smart00729 79 EILGLADDVEITIETRPGTLTEELLEALKEAGVNRVSLGVQSGSDEVLKAINRGHTVEDVLEAVEKLREAGPIKVSTDLI 158 (216)
T ss_pred HhCCCCCCeEEEEEeCcccCCHHHHHHHHHcCCCeEEEecccCCHHHHHHhcCCCCHHHHHHHHHHHHHhCCcceEEeEE
Confidence 43321 244556778899999999999999999999999 9999999999999999999999999999 89999999
Q ss_pred EecC-CCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC
Q psy8199 832 IGLS-ESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS 875 (965)
Q Consensus 832 ~Gl~-et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~ 875 (965)
+|++ ++.+++.+.++++++++ ++.+.+++++|.|||+++..+
T Consensus 159 ~g~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~p~~~t~~~~~~ 201 (216)
T smart00729 159 VGLPGETEEDFEETLKLLKELG--PDRVSIFPLSPRPGTPLAKLY 201 (216)
T ss_pred ecCCCCCHHHHHHHHHHHHHcC--CCeEEeeeeeeCCCChHHHhc
Confidence 9995 99999999999999999 899999999999999998755
No 272
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.79 E-value=1.4e-17 Score=184.72 Aligned_cols=281 Identities=13% Similarity=0.085 Sum_probs=186.1
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCc
Q psy8199 293 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 372 (965)
Q Consensus 293 ~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 372 (965)
.|+.+...+|.+.+++.++...++|++++|+++++..++++. . + +.+++.+++|..+...+...+.
T Consensus 36 ~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~~-~--------~-~~vv~~~P~y~~y~~~~~~~G~---- 101 (332)
T PRK06425 36 IYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYI-N--------V-GNIIIVEPNFNEYKGYAFTHGI---- 101 (332)
T ss_pred cCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh-C--------C-CcEEEeCCChHHHHHHHHHcCC----
Confidence 466777889999999999888889999999999999888632 1 3 3578889999888554444332
Q ss_pred cchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy8199 373 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 452 (965)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~ 452 (965)
.+..+|... .. .|.+.++ +. ...+.++++| +|++|.+. +.+.+++|.++|
T Consensus 102 ---------~v~~vp~~~--~~-----------~~~~~l~----~~-~~k~v~l~nP--~NPTG~~~-s~~~~~~l~~~a 151 (332)
T PRK06425 102 ---------RISALPFNL--IN-----------NNPEILN----NY-NFDLIFIVSP--DNPLGNLI-SRDSLLTISEIC 151 (332)
T ss_pred ---------eEEEEeCCc--cc-----------CcHHHHh----hc-CCCEEEEeCC--CCCcCCcc-CHHHHHHHHHHH
Confidence 233444321 00 1233332 21 2234556666 99999876 677799999999
Q ss_pred HhcCCeEEEeccccCCCcccccccccccCCCccee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCC
Q psy8199 453 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 528 (965)
Q Consensus 453 ~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~ 528 (965)
++||+++|+||+|..|...+........+-.++++ +|||.++ .| +++|++++++++++.+.. ....+
T Consensus 152 ~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~G-lRiGy~v~~~~li~~l~~--------~~~~~ 222 (332)
T PRK06425 152 RKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPS-LRIGYIATDDYNMKISRK--------ITEPW 222 (332)
T ss_pred HHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCch-hhheeeecCHHHHHHHHH--------cCCCC
Confidence 99999999999999885333111111122224555 6899887 56 899999999999988865 12233
Q ss_pred CCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHcccCCCceeee-eceeEEEEEEEeecCccchhhHHHHHHHH
Q psy8199 529 SGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVA 606 (965)
Q Consensus 529 ~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-~g~G~~~~i~~~~~~~~~~~~~~~~~~~~ 606 (965)
..+.+++++. ...+.-. .+...+.++++.+++.+.|+++ ++..+ .+.|.|+.+.+. + ...+.+.
T Consensus 223 ~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~~~~~~~g~f~~~~~~--~-------~~~~~~~ 288 (332)
T PRK06425 223 SVCDPAIDFI-RSIDLDYVAKHSLDIMENERSYLINNLEAM----GFRAAGDPSANFITFMIP--D-------AHDFYSY 288 (332)
T ss_pred ccCHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHC----CCEECCCCCceEEEEEcC--C-------HHHHHHH
Confidence 3444443322 2221100 1234566667777777777654 34433 467888777653 1 3467788
Q ss_pred HHHcCcEEeec-------CCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 607 ALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 607 l~~~Gi~~~~~-------~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
|.++||.++|+ .+++|++ ..+.++.+.+++++.+
T Consensus 289 l~~~gi~v~~~~~f~~~~~~~iRis---~~~~~~~~~l~~al~~ 329 (332)
T PRK06425 289 LLKNGILVRLLDDYECLGEQYIRIA---IRRRSFNIKLVNALRN 329 (332)
T ss_pred HHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHH
Confidence 88999999874 2589999 5677889999888764
No 273
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=3.5e-18 Score=190.91 Aligned_cols=284 Identities=14% Similarity=0.168 Sum_probs=191.7
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCc
Q psy8199 293 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 372 (965)
Q Consensus 293 ~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 372 (965)
.|+.....+|.+.+++.++.+.++|++++|++|++..+++.... ++++.|++.+++|..+...+...+.
T Consensus 53 ~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~-------~g~~~vli~~P~y~~y~~~~~~~G~---- 121 (351)
T PRK01688 53 RYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCE-------PGKDAILYCPPTYGMYSVSAETIGV---- 121 (351)
T ss_pred cCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC-------CCCCEEEEcCCCHHHHHHHHHHcCC----
Confidence 45555567999999999988889999999999999999987633 3447899999999776432222211
Q ss_pred cchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy8199 373 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 452 (965)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~ 452 (965)
.+..+|..... . .|++++++++. +....++++| +|++|.+. +.+.+++|.+.|
T Consensus 122 ---------~~~~v~~~~~~-~-----------~d~~~l~~~~~---~~~lv~l~nP--nNPTG~~~-~~~~l~~l~~~~ 174 (351)
T PRK01688 122 ---------EIRTVPTLDNW-Q-----------LDLPAIADNLD---GVKVVYVCSP--NNPTGNLI-NPQDLRTLLELT 174 (351)
T ss_pred ---------EEEEeecCCCC-C-----------CCHHHHHHhcc---CCcEEEEeCC--CCCCCCCC-CHHHHHHHHHhC
Confidence 23334432211 1 26777877662 2334566666 99999877 666788888888
Q ss_pred HhcCCeEEEeccccCCCcccccccccccCCCccee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCC
Q psy8199 453 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 528 (965)
Q Consensus 453 ~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~ 528 (965)
++ ++++|+||+|..|... ..........++++ ||||++| .| +++|++++++++++.+.. ....+
T Consensus 175 ~~-~~~vivDEay~~f~~~--~s~~~~~~~~~n~iv~rSfSK~~glaG-lRiGy~i~~~~~i~~l~~--------~~~~~ 242 (351)
T PRK01688 175 RG-KAIVVADEAYIEFCPQ--ASLAGWLAEYPHLVILRTLSKAFALAG-LRCGFTLANEEVINLLLK--------VIAPY 242 (351)
T ss_pred CC-CcEEEEECchhhcCCC--CChHHHHhhCCCEEEEecchHhhcCHH-HHHhHHhCCHHHHHHHHh--------ccCCC
Confidence 76 6899999999887421 11112222345655 6899886 34 899999999999988865 12345
Q ss_pred CCCHHHHHHHHHHHHHHh---cccHHHHHHHHHHHHHHHHHcccCCCcee-eeeceeEEEEEEEeecCccchhhHHHHHH
Q psy8199 529 SGNPLACCAALATLEIFN---KDNILQRISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFF 604 (965)
Q Consensus 529 ~~~~~~~aaa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~ 604 (965)
+.+.+++++|.++|+.-. -.+..+.+.+..+++.+.|+.+ +++. ..++.|+|+.+.+. + ...+.
T Consensus 243 ~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~ps~~nfi~~~~~--~-------~~~l~ 310 (351)
T PRK01688 243 PLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEI---PCVEQVFDSETNYILARFT--A-------SSAVF 310 (351)
T ss_pred CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCeECCCCCcEEEEEcC--C-------HHHHH
Confidence 667778888888775210 0122344455566676666544 4443 34566777776553 1 34678
Q ss_pred HHHHHcCcEEeec------CCEEEEeCCcccCHHHHHHHHHhh
Q psy8199 605 VAALKNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 605 ~~l~~~Gi~~~~~------~~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
+.|.++||.+++. .+++|++ ..+.++++.+++++
T Consensus 311 ~~L~~~gi~vr~~~~~~~~~~~iRis---~~~~~e~~~l~~al 350 (351)
T PRK01688 311 KSLWDQGIILRDQNKQPGLSNCLRIT---IGTREECQRVIDAL 350 (351)
T ss_pred HHHHHCCeEEEECCCcCCCCCeEEEe---CCCHHHHHHHHHhh
Confidence 8899999999863 2689999 44789999988776
No 274
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.78 E-value=2.4e-17 Score=182.59 Aligned_cols=270 Identities=13% Similarity=0.149 Sum_probs=178.5
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhc
Q psy8199 298 PVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 377 (965)
Q Consensus 298 ~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~ 377 (965)
...++.+.++++++...+++++++|+++++..+.++. .++ +|++.+++|+++.......
T Consensus 48 ~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l---------~~g-~vl~~~p~y~~~~~~~~~~----------- 106 (330)
T TIGR01140 48 EYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL---------APG-RVLVLAPTYSEYARAWRAA----------- 106 (330)
T ss_pred cHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh---------CCC-eEEEeCCCcHHHHHHHHHc-----------
Confidence 3477888888888766789999999999988865543 234 6999999998873221111
Q ss_pred ccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC
Q psy8199 378 SLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI 457 (965)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~ 457 (965)
+....+.+ |++++++.+.+ ..+++++.| +|++|.+. +.+.+++|.++|++||+
T Consensus 107 ----g~~~~~~~-----------------d~~~l~~~~~~---~~~v~i~~p--~NPtG~~~-~~~~~~~l~~~a~~~~~ 159 (330)
T TIGR01140 107 ----GHEVVELP-----------------DLDRLPAALEE---LDVLVLCNP--NNPTGRLI-PPETLLALAARLRARGG 159 (330)
T ss_pred ----CCEEEEeC-----------------CHHHHHhhccc---CCEEEEeCC--CCCCCCCC-CHHHHHHHHHHhHhcCC
Confidence 12222221 45777777632 224556666 88999866 78889999999999999
Q ss_pred eEEEeccccCCCcccccccccccCCCccee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHH
Q psy8199 458 HLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPL 533 (965)
Q Consensus 458 llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~ 533 (965)
++|+||+|.+|...... ....+..++++ +|||.++ .| +++|++++++++++.+.. ...+++.+++
T Consensus 160 ~ii~De~y~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~s~~ 228 (330)
T TIGR01140 160 WLVVDEAFIDFTPDASL--APQAARFPGLVVLRSLTKFFGLAG-LRLGFVVAHPALLARLRE--------ALGPWTVNGP 228 (330)
T ss_pred EEEEECcccccCCccch--hhHhccCCCEEEEEecchhhcCch-hhhhheeCCHHHHHHHHh--------cCCCCCchHH
Confidence 99999999877532111 11112224444 7899987 45 899999999999988865 2235667888
Q ss_pred HHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCc
Q psy8199 534 ACCAALATLEIFN-KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNEL 612 (965)
Q Consensus 534 ~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi 612 (965)
+++++.+.|+.-. .....++++.+.+++.+.|+++ +.+....+.|+|+++.+. + ..++.+.|.++||
T Consensus 229 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~f~~~~~~--~-------~~~l~~~l~~~gi 296 (330)
T TIGR01140 229 ARAAGRAALADTAWQAATRARLAAERARLAALLARL---GGLEVVGGTALFLLVRTP--D-------AAALHEALARRGI 296 (330)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhC---CCceECCCCCeEEEEEcC--C-------HHHHHHHHHHCCE
Confidence 8888887775211 0123455555555555555543 434444556777777653 1 2468889999999
Q ss_pred EEeecC-------CEEEEeCCcccCHHHHHHHHHhh
Q psy8199 613 LLRPIG-------NTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 613 ~~~~~~-------~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
++.|+. +++|++. ....++ +.++.++
T Consensus 297 ~v~pg~~f~~~~~~~iRi~~--~~~~~~-~~~~~~l 329 (330)
T TIGR01140 297 LIRDFDNFPGLDPRYLRFAL--PTDEEN-DRLEEAL 329 (330)
T ss_pred EEEECCCCCCCCCCEEEEEe--cCHHHH-HHHHHhh
Confidence 998742 5899994 333344 6666554
No 275
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.78 E-value=5.9e-17 Score=183.88 Aligned_cols=333 Identities=15% Similarity=0.077 Sum_probs=210.6
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhcc--ccccCCCCcHHHHHHHHHHHhhcCCC---CCeEEEcCChhHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQYK---LGHCFYGSDGASAVEV 329 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~~---~~~v~~~~sGseA~~~ 329 (965)
.++|+..|.. .++ .++.+.+|+.+.+.... .+....+..+.+..+++.+++.++.. .+++++++|+++|+..
T Consensus 28 ~~~~l~~g~~--~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQGVV--SYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 3566665533 233 47788999988765432 23334455677888999998887643 5689999999999988
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
++.... .+++.|++.+++|.++....... ...+..+|...... .|++
T Consensus 105 ~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~------------~d~~ 151 (389)
T PRK05957 105 AILAIT--------DPGDEIILNTPYYFNHEMAITMA-------------GCQPILVPTDDNYQ------------LQPE 151 (389)
T ss_pred HHHHhc--------CCCCEEEEeCCCCcCHHHHHHhc-------------CCEEEEeecCCCCC------------cCHH
Confidence 887653 25688999999986653221111 11233333321111 3678
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-cc-ccccCCCcce-
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FA-CEHAEIWPDF- 486 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~-~~~~~~~pDi- 486 (965)
++++++.+ ++.+|++.. ++|++|.+. +.+.+++|.++|++||+++|+||+|..|...+.. .. ....+..+.+
T Consensus 152 ~l~~~i~~---~~klv~~~~-p~NPtG~~~-~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i 226 (389)
T PRK05957 152 AIEQAITP---KTRAIVTIS-PNNPTGVVY-PEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTI 226 (389)
T ss_pred HHHHhcCc---CceEEEEeC-CCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEE
Confidence 88888752 344444444 599999877 6777999999999999999999999877433221 11 1111222233
Q ss_pred --eeeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--cccHHHHHHHHHHHH
Q psy8199 487 --LCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKI 561 (965)
Q Consensus 487 --vt~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~~~~~~~~~~~~~~l 561 (965)
-+|||.++ .| +++|++++++++++.+.. .......+.+.+++.++..+|+.-. -++..++++++.+.+
T Consensus 227 ~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l 299 (389)
T PRK05957 227 SLYSLSKAYGFAS-WRIGYMVIPIHLLEAIKK------IQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQIL 299 (389)
T ss_pred EEecchhhccCcc-ceeEEEecCHHHHHHHHH------HHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 36899886 45 899999999999988865 1222234456678888877774210 022344556666666
Q ss_pred HHHHHcccCCCce-eeeecee-EEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCEEEEeCCcccCH
Q psy8199 562 TKALTSLITHPKI-INFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNK 631 (965)
Q Consensus 562 ~~~L~~l~~~~~i-~~v~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~lR~~p~~~~t~ 631 (965)
.+.|+.+ +++ ....+.| +++++.+. ... ...++.+.|. ++||.+.|+ ++++|++.. ..++
T Consensus 300 ~~~L~~~---~~~~~~~~~~gg~~~~~~~~--~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~ 369 (389)
T PRK05957 300 LKSLGQL---QDRCTLHPANGAFYCFLKVN--TDL----NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG-ALQK 369 (389)
T ss_pred HHHHHhc---CCCccccCCCeeEEEEEeCC--CCC----ChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe-cCCH
Confidence 6666554 332 2234454 45555553 111 1345767776 689999884 248999943 2578
Q ss_pred HHHHHHHHhhhccc
Q psy8199 632 NEIQHMTSAIFQTF 645 (965)
Q Consensus 632 ~~i~~~~~~l~~~~ 645 (965)
+++.+.++++.+.+
T Consensus 370 ~~l~~~~~~l~~~~ 383 (389)
T PRK05957 370 ATAKEGIERLVQGL 383 (389)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888876543
No 276
>PRK06855 aminotransferase; Validated
Probab=99.78 E-value=5.4e-17 Score=186.17 Aligned_cols=345 Identities=14% Similarity=0.084 Sum_probs=204.5
Q ss_pred CcccccccccchhccCCCC-CHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 327 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~ 327 (965)
|+..+++..|.. ...+.. ++.+.+++.+.+... ..|....+..+.++.+++.+.+..+ .+.++|++|+|+++|+
T Consensus 31 g~~~~~~~~G~p-~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al 109 (433)
T PRK06855 31 GVKITWENIGDP-IAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI 109 (433)
T ss_pred cccccccccCCC-cccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence 455666654422 112344 667788888776442 2244445566777888888877543 3567999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 407 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 407 (965)
..++.++ .+++.|++.+++|+++........+ ...+.+|.....+.. .|
T Consensus 110 ~~~~~l~---------~~Gd~Vlv~~P~Y~~~~~~~~~~~g------------~~~v~v~~~~~~~~~----------~d 158 (433)
T PRK06855 110 AKIYGLL---------RREARVIGPSPAYSTHSSAEAAHAG------------YPPVTYRLDPENNWY----------PD 158 (433)
T ss_pred HHHHHhc---------CCCCeEEEeCCCCchHHHHHHHhcC------------CeEEEEecccccCCC----------CC
Confidence 8887532 3568899999999987422111111 011222321100000 26
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccc-cccCCCcc
Q psy8199 408 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FAC-EHAEIWPD 485 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~-~~~~~~pD 485 (965)
+++|++++.+.+...++++++| +|++|.+. +.+.+++|.++|++||+++|.||+|..+-..+.. ... ....-.+.
T Consensus 159 ~~~l~~~~~~~~~~~~i~l~~P--~NPTG~~~-s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~ 235 (433)
T PRK06855 159 LDDLENKVKYNPSIAGILLINP--DNPTGAVY-PKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPG 235 (433)
T ss_pred HHHHHHHHhcCCCceEEEEECC--CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCe
Confidence 7889988864333345566767 89999866 7888999999999999999999999988544431 111 11110111
Q ss_pred e--eeeccccC-CCcccceeeeec-----H---HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccH----
Q psy8199 486 F--LCLSKGIT-GGYLPLSLVMTT-----D---KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI---- 550 (965)
Q Consensus 486 i--vt~sK~l~-gG~~pig~v~~~-----~---~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~---- 550 (965)
+ -+|||.++ .| +++|+++++ + ++++.+.. . .....+.+.+++.++.++|+--.-++.
T Consensus 236 I~~~S~SK~~~~pG-lRiG~ii~p~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~ 307 (433)
T PRK06855 236 IALKGISKELPWPG-SRCGWIEVYNADKDEVFKKYINSILN------A-KMIEVCSTTLPQMAIPRIMSHPEYKNYLKER 307 (433)
T ss_pred EEEecCccccCCCc-ceEEEEEEeCCchhhHHHHHHHHHHH------h-hccccCCChHHHHHHHHhhcCCcHHHHHHHH
Confidence 2 26899886 45 899999972 2 23333322 1 112345678888888888742110122
Q ss_pred HHHHHHHHHHHHHHHHcccCCCceeeeeceeEE-EEEEEeecCc--------cch---hh-----------HHHHHH-HH
Q psy8199 551 LQRISQDMKKITKALTSLITHPKIINFRQKGMI-WAFDVIIEDP--------EQI---ET-----------FSKKFF-VA 606 (965)
Q Consensus 551 ~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~-~~i~~~~~~~--------~~~---~~-----------~~~~~~-~~ 606 (965)
.+.++++.+.+.+.|++ .+++...++.|.| +++.+. ... ... .. ....+. ..
T Consensus 308 ~~~~~~r~~~~~~~L~~---~~~~~~~~p~gg~~~w~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (433)
T PRK06855 308 NKRYEKRSNIAYEKLKD---VPGLKVNRTNGAFYMTVVFE-DGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYL 383 (433)
T ss_pred HHHHHHHHHHHHHHHhc---CCCeeccCCCeeEEEeeccc-cccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHH
Confidence 33334444444454443 3455555676654 444443 110 000 00 022344 44
Q ss_pred HHHcCcEEeecC------CEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 607 ALKNELLLRPIG------NTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 607 l~~~Gi~~~~~~------~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+.++||.+.|+. +.+|++-.. .+++++++.++++.+.+
T Consensus 384 ~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~ 427 (433)
T PRK06855 384 LASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKI 427 (433)
T ss_pred HHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHH
Confidence 668899998852 368999432 48899999998887654
No 277
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=1.8e-17 Score=186.17 Aligned_cols=318 Identities=12% Similarity=0.133 Sum_probs=204.2
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCC-CeEEEcCChhHHHHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVAL 331 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGseA~~~Al 331 (965)
++.++|+..| .++++ .+|++++++.+.+..... ..|+.....+|.+.++++++... +++++++|+++++..++
T Consensus 25 ~~~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~---~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~ 98 (356)
T PRK04870 25 ATGMVKLDAM--ENPYR-LPAELRAELGERLAEVAL---NRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLA 98 (356)
T ss_pred CCCceeCcCC--CCCCC-CCHHHHHHHHHHhhcccc---ccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHH
Confidence 5678888766 34555 588999999988764211 12223334677777777776443 48999999999999888
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
++... +++.|++.+++|.++...+...+ ..++.+|..+. +. .|++++
T Consensus 99 ~~~~~--------~gd~vlv~~P~y~~~~~~~~~~g-------------~~~~~i~~~~~-~~-----------~d~~~l 145 (356)
T PRK04870 99 LACAK--------PGATVLAPEPGFVMYRMSAKLAG-------------LEFVGVPLTAD-FT-----------LDLPAM 145 (356)
T ss_pred HHhcC--------CCCEEEECCCCHHHHHHHHHHcC-------------CEEEEecCCCC-CC-----------CCHHHH
Confidence 76632 56889999999987633222221 12333333211 11 267888
Q ss_pred HHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---e
Q psy8199 412 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---C 488 (965)
Q Consensus 412 e~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t 488 (965)
++++... ++.+|++.. ++|++|.+. +.+.+++|.++| ++++|+||+|..|... .+. ....-.++++ +
T Consensus 146 ~~~~~~~--~~~~v~l~~-p~NPtG~~~-~~~~~~~i~~~~---~~~ii~De~y~~~~~~-~~~--~~~~~~~~vi~~~S 215 (356)
T PRK04870 146 LAAIAEH--RPALVFLAY-PNNPTGNLF-DDADVERIIEAA---PGLVVVDEAYQPFAGD-SWL--PRLARFPNLLVMRT 215 (356)
T ss_pred HHHhhcC--CCCEEEEcC-CCCCCCCCC-CHHHHHHHHHHC---CCEEEEECCchhhcCc-chH--HHHhhCCCEEEEec
Confidence 8888632 344444443 489999877 556677777776 7899999999877421 111 1111123343 6
Q ss_pred eccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHc
Q psy8199 489 LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTS 567 (965)
Q Consensus 489 ~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~ 567 (965)
||| .+..++++|++++++++++.+..- ...++.+.++++++..+|+... -++..++++++.+++.+.|++
T Consensus 216 ~SK-~~~~GlRiG~~i~~~~~i~~~~~~--------~~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 286 (356)
T PRK04870 216 VSK-LGLAGLRLGYLAGHPAWIAELDKV--------RPPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAA 286 (356)
T ss_pred chh-hhhHHHhhhhhhCCHHHHHHHHHc--------cCCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899 433228999999999999887651 1234567888888877775321 122445566666666666654
Q ss_pred ccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEEEeCCcccCHHHHHHHHHh
Q psy8199 568 LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSA 640 (965)
Q Consensus 568 l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~~p~~~~t~~~i~~~~~~ 640 (965)
+ +++...+..|.++.+.+. + ...+.+.|.++||.++++ .+++|++ ..+.++.++++++
T Consensus 287 ~---~~~~~~~~~~~~~~~~~~--~-------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis---~~~~~~~~~l~~a 351 (356)
T PRK04870 287 L---PGVTVFPSAANFILVRVP--D-------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVT---VGTPEENAQFLAA 351 (356)
T ss_pred C---CCcEECCCCCeEEEEECC--C-------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEe---CCCHHHHHHHHHH
Confidence 4 455444556777766552 1 245778889999999863 2589999 3478889988888
Q ss_pred hhc
Q psy8199 641 IFQ 643 (965)
Q Consensus 641 l~~ 643 (965)
+.+
T Consensus 352 l~~ 354 (356)
T PRK04870 352 LKA 354 (356)
T ss_pred HHH
Confidence 764
No 278
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=1.8e-17 Score=186.89 Aligned_cols=320 Identities=13% Similarity=0.101 Sum_probs=202.5
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 332 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~ 332 (965)
+..++|+..| .+++| .+|.+.+++.+.......| +...-.+|.+.+++.++.+.+++++++|+++++..++.
T Consensus 35 ~~~~i~l~~~--~~~~~-~~~~~~~al~~~~~~~~~Y-----~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 106 (371)
T PRK05166 35 VPRIAKLGSN--ENPLG-PSPAVRRAFADIAELLRLY-----PDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICR 106 (371)
T ss_pred CcceEEcCCC--CCCCC-CCHHHHHHHHHHHHHhhcC-----CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 4478998876 34566 5788998887755443222 22222367777888877677899999999999988887
Q ss_pred HHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHH
Q psy8199 333 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 412 (965)
Q Consensus 333 ~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 412 (965)
... .+++.|++.+++|.++.......+ ..+..++..... . .|+++++
T Consensus 107 ~~~--------~~gd~vli~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~-~-----------~~~~~l~ 153 (371)
T PRK05166 107 AVL--------RPGDRVVTLYPSFPLHEDYPTMMG-------------ARVERVTVTPDL-G-----------FDLDALC 153 (371)
T ss_pred Hhc--------CCCCEEEEcCCChHHHHHHHHHcC-------------CeEEEeecCCCC-C-----------CCHHHHH
Confidence 653 256789999999976632221111 123333332111 1 2577888
Q ss_pred HHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-cccccc-CCCccee---
Q psy8199 413 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHA-EIWPDFL--- 487 (965)
Q Consensus 413 ~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~-~~~pDiv--- 487 (965)
+++.+. ....++.+| +|++|.+. +.+.+++|.++|++ ++++|+||+|..|-..+.. ...... ...++++
T Consensus 154 ~~~~~~--~~~v~l~~p--~NPtG~~~-~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~ 227 (371)
T PRK05166 154 AAVARA--PRMLMFSNP--SNPVGSWL-TADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLR 227 (371)
T ss_pred HhhhcC--CCEEEEeCC--CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEe
Confidence 877542 223445566 89999877 66668888888865 8999999999877422211 111111 1223444
Q ss_pred eeccccC-CCcccceeeee-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHH
Q psy8199 488 CLSKGIT-GGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKA 564 (965)
Q Consensus 488 t~sK~l~-gG~~pig~v~~-~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~ 564 (965)
+|||.++ .| +++|++++ ++++++.+.. ....++.+.+++.++.++|..-. -+...+..+++.+++.+.
T Consensus 228 SfSK~~~l~G-lRiG~~i~~~~~l~~~~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~ 298 (371)
T PRK05166 228 TFSKAYGLAG-LRVGYGLVSDPELVGLLDR--------VRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKE 298 (371)
T ss_pred echHhhhcch-hheeeeecCCHHHHHHHHH--------hccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5899887 56 89999765 6788887754 12345678888888888874210 012334455556666666
Q ss_pred HHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----CCEEEEeCCcccCHHHHHHHHH
Q psy8199 565 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTS 639 (965)
Q Consensus 565 L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~~~ 639 (965)
|++. ++...++.|+++.+.+. .+ ...+.+.|.++||.+.|+ .+++|++. .+.++.+.+.+
T Consensus 299 L~~~----g~~~~p~~g~fl~~~~~-~~-------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~---~~~~~~~~l~~ 363 (371)
T PRK05166 299 LAEM----GYRIAPSRANFLFFDAR-RP-------ASAVAEALLRQGVIVKPWKQPGFETFIRVSI---GSPEENDHFVA 363 (371)
T ss_pred HHHC----cCeeCCCcCCEEEEeCC-CC-------HHHHHHHHHHCCeEEecCCCCCCCCeEEEEc---CCHHHHHHHHH
Confidence 6554 33334566777766542 11 346788888999999875 26899993 35556666666
Q ss_pred hhhc
Q psy8199 640 AIFQ 643 (965)
Q Consensus 640 ~l~~ 643 (965)
+++.
T Consensus 364 ~l~~ 367 (371)
T PRK05166 364 ALDK 367 (371)
T ss_pred HHHH
Confidence 6543
No 279
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.78 E-value=1.5e-17 Score=184.47 Aligned_cols=300 Identities=12% Similarity=0.076 Sum_probs=198.0
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCC-CCeEEEcCChhHHHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGASAVEVALK 332 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~v~~~~sGseA~~~Al~ 332 (965)
.+++|+.++. +++|...+.+.. ..+ ..|+... .+|.+.+++.++.. .++|++++|++|++.....
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~--------~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~ 89 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAW--------RRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA 89 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHH--------HhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH
Confidence 5789998884 788876433321 111 1244444 78999999998765 4799999999999975543
Q ss_pred HHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHH
Q psy8199 333 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 412 (965)
Q Consensus 333 ~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 412 (965)
+. .++ .+++.+++|.++...+...+. .+..++.. .+.++
T Consensus 90 ~~---------~~g-~v~v~~P~y~~y~~~~~~~g~-------------~~~~v~~~------------------~~~~~ 128 (339)
T PRK06959 90 LL---------PRG-RVGIAPLAYSEYAPAFARHGH-------------RVVPLDEA------------------ADTLP 128 (339)
T ss_pred hc---------CCC-eEEEcCCCcHHHHHHHHHCCC-------------EEEeeccc------------------chhcc
Confidence 22 133 488899999887443333221 12222210 01111
Q ss_pred HHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---ee
Q psy8199 413 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CL 489 (965)
Q Consensus 413 ~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~ 489 (965)
+ ....+++++| +|++|.+. +.+.++++.+.|+++++++|+||+|..|... . ......+ .++++ ||
T Consensus 129 ~------~~~~v~l~nP--nNPTG~~~-s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-~-s~~~~~~-~~~vi~l~Sf 196 (339)
T PRK06959 129 A------ALTHLIVVNP--NNPTAERL-PAARLLRWHAQLAARGGTLIVDEAFADTLPA-A-SLAAHTD-RPGLVVLRSV 196 (339)
T ss_pred c------cCCEEEEeCC--CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEECCCccCCCc-c-cchhccC-CCCEEEEecC
Confidence 1 1125788888 89999876 6666888888899999999999999877421 1 1111111 24554 68
Q ss_pred ccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHc
Q psy8199 490 SKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTS 567 (965)
Q Consensus 490 sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~ 567 (965)
||.++ .| +++|++++++++++.+.. ....++.+.++++++.++|+--. .+...+.+++..+++.+.|++
T Consensus 197 SK~~gl~G-lRiGy~v~~~~li~~l~~--------~~~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~ 267 (339)
T PRK06959 197 GKFFGLAG-VRAGFVLAAPALLAALRD--------ALGAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRA 267 (339)
T ss_pred hhhcCCcc-hheEEEecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887 45 899999999999998876 12356678899999999885211 123456666677777777766
Q ss_pred ccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC--CEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 568 LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 568 l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+ ++. +.+.++++.+.+. + ...+.+.|.++||+++..+ +++|++ +..+.++.+.+++++.+..
T Consensus 268 ~----g~~-~~~~~~f~~~~~~--~-------~~~l~~~l~~~GI~vr~~~~~~~lRis--i~~~~~e~~~l~~al~~~~ 331 (339)
T PRK06959 268 H----GFA-VHATPLFSWTDDP--R-------AAALHAALARRGIWTRYFAPPPSVRFG--LPADEAEWQRLEDALAECV 331 (339)
T ss_pred C----CCC-ccCcceEEEEeCC--C-------HHHHHHHHHhCCeEEEECCCCCeEEEE--CCCCHHHHHHHHHHHHHHH
Confidence 5 222 2234555555432 1 3467889999999998754 689999 4467788999988886544
No 280
>PLN02672 methionine S-methyltransferase
Probab=99.78 E-value=3.1e-17 Score=198.20 Aligned_cols=346 Identities=12% Similarity=0.073 Sum_probs=220.2
Q ss_pred eEEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCC---eEEEcCC
Q psy8199 246 SKLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG---HCFYGSD 322 (965)
Q Consensus 246 ~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~---~v~~~~s 322 (965)
.++.+.+|..+|++..|. +.++ .+|.+.+|+.+.+....+ ..+..+....+++++++..+...+ ++++++|
T Consensus 689 ~~~~~~~g~~vI~LsinE--~d~p-pPp~V~eAi~eal~~~~~---s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~G 762 (1082)
T PLN02672 689 LSVSGSQESSLIHMDVDE--SFLP-VPSAVKASIFESFVRQNI---SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDT 762 (1082)
T ss_pred cCCcccCCCCEEEEeCCC--CCCC-CCHHHHHHHHHHHhhcCC---CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCC
Confidence 577888899999998773 4566 688999999887765322 223455688999999998776554 7999999
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhH
Q psy8199 323 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 402 (965)
Q Consensus 323 GseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (965)
+++++..++....+ +++.|++..++|..+...+...+. .+..+|.....+..
T Consensus 763 s~elL~lll~aLl~--------pGD~VLVp~PtY~~Y~~~a~~~Ga-------------~vv~Vpl~~e~gf~------- 814 (1082)
T PLN02672 763 SLALFNKLVLCCVQ--------EGGTLCFPAGSNGTYVSAAKFLKA-------------NFRRIPTKSSDGFK------- 814 (1082)
T ss_pred HHHHHHHHHHHHcC--------CCCEEEEeCCChHHHHHHHHHcCC-------------EEEEEecccccCCC-------
Confidence 88888888776643 568999999999888544333322 23344432111111
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc---ccc-
Q psy8199 403 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF---ACE- 478 (965)
Q Consensus 403 ~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~---~~~- 478 (965)
.|+++|++++... ...+.+++.| .+|++|.+. +.+.+++|.++|++||+++|+||+|.++-..+... .+.
T Consensus 815 ---lD~d~Le~al~~~-~~~~I~L~nP-nhNPTG~v~-S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s 888 (1082)
T PLN02672 815 ---LTAKTLASTLETV-KKPWVYISGP-TINPTGLLY-SNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKS 888 (1082)
T ss_pred ---CCHHHHHHHhccC-CCCEEEEECc-CCCCcCccC-CHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhh
Confidence 2678888887532 2346778888 448999765 78889999999999999999999998775544321 110
Q ss_pred ---cc-CCCc--cee---eeccccCCCcccceeeeecH-HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc
Q psy8199 479 ---HA-EIWP--DFL---CLSKGITGGYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 548 (965)
Q Consensus 479 ---~~-~~~p--Div---t~sK~l~gG~~pig~v~~~~-~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~ 548 (965)
.+ ...+ .++ +|||.++.+++++|++++++ ++++.+..- . .....+..+..+++++++.++. +..
T Consensus 889 ~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~---~--~~s~~~~~~q~Aaaaalall~~-~~~ 962 (1082)
T PLN02672 889 ILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSA---P--GLSRPHSTLKYTIKKLLGLKNQ-KSS 962 (1082)
T ss_pred HHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHh---h--hhcCCCcHHHHHHHHHHHHHhc-cCc
Confidence 11 1112 233 68996655449999999864 488877541 0 0111112223344444433310 111
Q ss_pred -------cHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecC-------ccc-----hhhHHHHHHHHHHH
Q psy8199 549 -------NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIED-------PEQ-----IETFSKKFFVAALK 609 (965)
Q Consensus 549 -------~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~-------~~~-----~~~~~~~~~~~l~~ 609 (965)
+..+.++++.+++.+.|++. ++...++.|.|+.+.....- ... .......+++.|++
T Consensus 963 ~~~~~l~e~r~~Lk~rRd~L~e~L~~~----Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLe 1038 (1082)
T PLN02672 963 DLLDGVAEQKKILKSRAERLKETLEAC----GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILK 1038 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC----CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHH
Confidence 22344566666666666553 45566778777766532000 000 00123467788876
Q ss_pred c-CcEEeec-----CCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 610 N-ELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 610 ~-Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+ ||.+.|+ .+++||+ +..++++++++++++.+
T Consensus 1039 e~GVaV~PGs~FG~~g~~RIs--fa~~~e~LeeALerL~k 1076 (1082)
T PLN02672 1039 STGLCINSSSWTGIPGYCRFS--FALEDSEFDRALKAIAR 1076 (1082)
T ss_pred cCCEEEecCcccCCCCeEEEE--ecCCHHHHHHHHHHHHH
Confidence 5 9999884 2689999 66788899999988765
No 281
>PRK07379 coproporphyrinogen III oxidase; Provisional
Probab=99.78 E-value=8.2e-18 Score=188.87 Aligned_cols=205 Identities=13% Similarity=0.169 Sum_probs=160.8
Q ss_pred eccCCCCCCCCCCCCCCcCCCCcccccC-C----CHHHHHHHHHHHHH--CCCCEEEEeeccCCCCcccHHHHHHHHHHH
Q psy8199 687 IKTGGCTEDCGYCPQSTHYNTEITATKI-L----SIESVITAAQKAKS--DGATRFCMGAAWRELKDRDLDNIENMICEV 759 (965)
Q Consensus 687 ~~s~~C~~~C~fC~~~~~~~~~~~~~~~-~----~~eei~~~~~~~~~--~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i 759 (965)
+.-..|+..|.||.|.........+.+. . =.+.+.++++.... .+++.++|.||.. ...+.+.+.++++.+
T Consensus 15 iHiPFC~~~C~YC~f~~~~~~~~~~~~~~~~~~~Y~~~L~~Ei~~~~~~~~~i~~iy~GGGTp--s~l~~~~l~~ll~~i 92 (400)
T PRK07379 15 IHIPFCRRRCFYCDFPISVVGDRTRGGTSGLIEEYVEVLCQEIAITPSFGQPLQTVFFGGGTP--SLLSVEQLERILTTL 92 (400)
T ss_pred EEeccccCcCCCCCCccccccccccccccchHHHHHHHHHHHHHHhhccCCceeEEEECCCcc--ccCCHHHHHHHHHHH
Confidence 3346799999999986531111000000 0 13456666654322 2578888877743 334567777777777
Q ss_pred Hhc-------CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeE
Q psy8199 760 KKI-------GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGG 830 (965)
Q Consensus 760 ~~~-------~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~ 830 (965)
++. .+.+.++++.++.+.++.|+++|++++++|+|| ++++++.+.+.++.++..++++.++++|+. ++..+
T Consensus 93 ~~~~~~~~~~eit~E~~P~~lt~e~l~~l~~~GvnrislGvQS~~d~~L~~l~R~~~~~~~~~ai~~l~~~G~~~v~~dl 172 (400)
T PRK07379 93 DQRFGIAPDAEISLEIDPGTFDLEQLQGYRSLGVNRVSLGVQAFQDELLALCGRSHRVKDIFAAVDLIHQAGIENFSLDL 172 (400)
T ss_pred HHhCCCCCCCEEEEEeCCCcCCHHHHHHHHHCCCCEEEEEcccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 652 234456788999999999999999999999999 999999999999999999999999999997 89999
Q ss_pred EEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC------CCCCHHHHHHHHHHHHHHCCC
Q psy8199 831 IIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS------SILDPLEFIRTIAVARITMPT 895 (965)
Q Consensus 831 i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~------~~~~~~~~~~~ia~~R~~lp~ 895 (965)
|+|+ |||.+++.++++.+.+++ ++.|+++.++|.|||++.+. ..++.++..++...++..|..
T Consensus 173 I~GlPgqt~e~~~~tl~~~~~l~--p~~is~y~L~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~ 242 (400)
T PRK07379 173 ISGLPHQTLEDWQASLEAAIALN--PTHLSCYDLVLEPGTAFGKQYQPGKAPLPSDETTAAMYRLAQEILTQ 242 (400)
T ss_pred ecCCCCCCHHHHHHHHHHHHcCC--CCEEEEecceecCCchhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999 699999999999999999 99999999999999998752 456788888898888888753
No 282
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.78 E-value=7.3e-17 Score=184.35 Aligned_cols=336 Identities=12% Similarity=0.073 Sum_probs=211.8
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhcccc-ccC-----CCCcHHHHHHHHHHHhhcCC-CCCeEEEcCChhH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLS-----NLTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGAS 325 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~-~~~-----~~~~~~~~~la~~l~~~~~~-~~~~v~~~~sGse 325 (965)
+..|||..+. |-.++.+.+++.+.+...... +.. ....+...++.+.++++++. ..+.|+|++|+++
T Consensus 19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 5679997664 336788999998887653111 100 01233456788889999986 6779999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
++..+++..... ...++++||+.++.|++........ .......+..+|.+... .
T Consensus 93 ~i~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~---------~~~~g~~v~~v~~~~~~-~----------- 147 (401)
T PRK10874 93 SINLVAQSYARP----RLQPGDEIIVSEAEHHANLVPWLMV---------AQQTGAKVVKLPLGADR-L----------- 147 (401)
T ss_pred HHHHHHHHhhhc----cCCCcCEEEECCcchHHHHHHHHHH---------HHHhCCEEEEEecCCCC-c-----------
Confidence 999998865310 0035678999998886631100000 00011233444443211 1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
.|++++++.+. +++.+|++.. +++++|.+.| +++|.++|+++|+++|+|++|. +|.. ........+|
T Consensus 148 ~d~~~l~~~i~---~~t~lv~i~~-~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~----~~~~~~~~~d 214 (401)
T PRK10874 148 PDVDLLPELIT---PRTRILALGQ-MSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF----PADVQALDID 214 (401)
T ss_pred CCHHHHHHhcC---cCcEEEEEeC-CcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc----cCCchhcCCC
Confidence 36788888885 3455566655 6899999987 8999999999999999999995 4332 1222234578
Q ss_pred eeeec--cccCCCcccceeeeecHHHHHhhhcc--CCc--------------ccccccCCCCCCHHHHHHHHHHHHHHhc
Q psy8199 486 FLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK--NNI--------------NIFLHSHSYSGNPLACCAALATLEIFNK 547 (965)
Q Consensus 486 ivt~s--K~l~gG~~pig~v~~~~~i~~~~~~~--~~~--------------~~~~~~~t~~~~~~~~aaa~a~L~~~~~ 547 (965)
++++| |.++- ..+|++++++++++.+..- +.. .+... ..-+.|..++++..++++.+.+
T Consensus 215 ~~~~s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~Gt~~~~~~~al~~al~~l~~ 291 (401)
T PRK10874 215 FYAFSGHKLYGP--TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRF-EAGTPNVAGVIGLSAALEWLAD 291 (401)
T ss_pred EEEEecccccCC--CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhc-cCCCcCHHHHHHHHHHHHHHHH
Confidence 88766 95432 3478888999988765420 000 00000 0012355577777777776654
Q ss_pred cc---HHHHHHHHHHHHHHHHHcccCCCceeeee-ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec------
Q psy8199 548 DN---ILQRISQDMKKITKALTSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------ 617 (965)
Q Consensus 548 ~~---~~~~~~~~~~~l~~~L~~l~~~~~i~~v~-g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------ 617 (965)
.+ ..++.+++.+++.+.|+++ |++..+. ..+.++.+.+. . .. ...+.+.|.++||.++++
T Consensus 292 ~g~~~~~~~~~~l~~~l~~~l~~~---~g~~~~~~~~~~i~~~~~~--~----~~-~~~~~~~L~~~gI~v~~g~~~~~~ 361 (401)
T PRK10874 292 IDINQAESWSRSLATLAEDALAKL---PGFRSFRCQDSSLLAFDFA--G----VH-HSDLVTLLAEYGIALRAGQHCAQP 361 (401)
T ss_pred hCHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCCcEEEEEEC--C----cC-HHHHHHHHHHCCcEEeccccchHH
Confidence 32 4556666667777766544 4554332 33446666553 1 11 245777888999998752
Q ss_pred -------CCEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 618 -------GNTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 618 -------~~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
.+.+|+++....++++++.+++.+.+.+
T Consensus 362 ~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~ 396 (401)
T PRK10874 362 LLAALGVTGTLRASFAPYNTQSDVDALVNAVDRAL 396 (401)
T ss_pred HHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHH
Confidence 2589999999999999999999887643
No 283
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.78 E-value=2e-17 Score=188.51 Aligned_cols=339 Identities=10% Similarity=0.047 Sum_probs=203.7
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHH----h--hccccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEE--cCC
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQL----N--KLEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFY--GSD 322 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~----~--~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~s 322 (965)
+...+|+..|.... +. .++.+.+++.+++ . ....|....+..+.++.+++.+.+..+ ...++|.+ +++
T Consensus 28 ~~~~i~l~~g~~~~-~~-~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G 105 (404)
T PTZ00376 28 SPSKVNLGIGAYRD-EN-GKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALS 105 (404)
T ss_pred CcccEecccceeEC-CC-CCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccC
Confidence 44668887764211 11 1223344444443 2 122344445666677777777655432 24568884 899
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecC-CCCCCCCCCCChh
Q psy8199 323 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PDSRNINKGNSAN 401 (965)
Q Consensus 323 GseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 401 (965)
|++|+..++.+.+.+. .+++.|++.+++|+++.......+. .+..+|. ++....
T Consensus 106 ~~~al~~~~~~l~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~l~~~~~~~------- 160 (404)
T PTZ00376 106 GTGALRLGFEFLKRFL-----PAGTTVYVSNPTWPNHVNIFKSAGL-------------NVKEYRYYDPKTKG------- 160 (404)
T ss_pred cchHHHHHHHHHHHhc-----CCCCEEEEcCCCchhHHHHHHHcCC-------------ceeeccccCcccCC-------
Confidence 9999999887554331 3568999999999998543333332 2333333 111111
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccc---cccccc
Q psy8199 402 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG---KFFACE 478 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~~~~~ 478 (965)
.|++.+++++++...+..++++.. ++|++|.+. +.+.+++|.++|++||+++|.||+|.+|...+ ......
T Consensus 161 ----~d~~~l~~~~~~~~~~~~~~~~~~-p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 234 (404)
T PTZ00376 161 ----LDFDGMLEDLRTAPNGSVVLLHAC-AHNPTGVDP-TEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIR 234 (404)
T ss_pred ----cCHHHHHHHHHhCCCCCEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHH
Confidence 367888888865433334555444 499999876 78889999999999999999999999875432 111111
Q ss_pred cc-CCCccee---eeccccC-CCcccceee---eecHHHHHhhhccCCcccccccCCCC-CCHHHHHHHHHHHHHHh---
Q psy8199 479 HA-EIWPDFL---CLSKGIT-GGYLPLSLV---MTTDKIYNSIYYKNNINIFLHSHSYS-GNPLACCAALATLEIFN--- 546 (965)
Q Consensus 479 ~~-~~~pDiv---t~sK~l~-gG~~pig~v---~~~~~i~~~~~~~~~~~~~~~~~t~~-~~~~~~aaa~a~L~~~~--- 546 (965)
.+ ...++++ +|||.++ .| +++|++ ++++++++.+... .. ....+++. .+++++.++.++|+.-.
T Consensus 235 ~~~~~~~~vi~i~SfSK~~~~~G-lRvG~~~~~~~~~~~~~~l~~~--~~-~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 310 (404)
T PTZ00376 235 LFAERGVEFLVAQSFSKNMGLYG-ERIGALHIVCANKEEAANVLSQ--LK-LIIRPMYSSPPIHGARIADRILSDPELRA 310 (404)
T ss_pred HHHhcCCcEEEEEeCCCcccccc-cccceEEEEeCCHHHHHHHHHH--HH-HHHhhhcCCCchHHHHHHHHHhCCHHHHH
Confidence 11 1122444 6899887 56 899998 5677655543220 00 01123333 46788888888884211
Q ss_pred -----cccHHHHHHHHHHHHHHHHHcccCCC-ceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHc-CcEEeecCC
Q psy8199 547 -----KDNILQRISQDMKKITKALTSLITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPIGN 619 (965)
Q Consensus 547 -----~~~~~~~~~~~~~~l~~~L~~l~~~~-~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~ 619 (965)
-....++++++.+.+.+.|++. ..+ .+....+.|.|+.+.-. ...+++.|.++ ||.+.|++
T Consensus 311 ~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~p~gg~f~~~~~----------~~~~~~~L~~~~~v~v~p~~- 378 (404)
T PTZ00376 311 EWLSELKEMSGRIQNMRQLLYDELKAL-GSPGDWEHIINQIGMFSFTGL----------TKEQVERLIEKYHIYLLDNG- 378 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccccccCceEEEecCC----------CHHHHHHHHHhCCEeecCCC-
Confidence 0122345566677777777665 222 23344566666555322 12455666655 99999874
Q ss_pred EEEEeCCcc-cCHHHHHHHHHhhhcc
Q psy8199 620 TVYLMPPYI-LNKNEIQHMTSAIFQT 644 (965)
Q Consensus 620 ~lR~~p~~~-~t~~~i~~~~~~l~~~ 644 (965)
|++ +. .+.++++.+++++...
T Consensus 379 --Ris--~~~~~~~~~~~~~~~l~~~ 400 (404)
T PTZ00376 379 --RIS--VAGLTSKNVDYVAEAIHDV 400 (404)
T ss_pred --eEE--EeccCHHhHHHHHHHHHHH
Confidence 888 43 7899999999998754
No 284
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.78 E-value=7.2e-17 Score=184.23 Aligned_cols=335 Identities=11% Similarity=0.066 Sum_probs=210.5
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhccccc-cCCC-----CcHHHHHHHHHHHhhcCCC-CCeEEEcCChhH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVM-LSNL-----THKPVIKLSEKLSSLTQYK-LGHCFYGSDGAS 325 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~-~~~~-----~~~~~~~la~~l~~~~~~~-~~~v~~~~sGse 325 (965)
+..|||..+. |..++.+.+++.+.+....... ...+ ..+...++.+.++++++.. .+.|+|++|+|+
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 4689997664 3367899999988775421110 0111 1234567888899988763 679999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
++..++...... ...++++|++.++.|++....... ........+..+|.+.. +.
T Consensus 90 ~l~~~~~~~~~~----~~~~gd~Vl~~~~~~~s~~~~~~~---------~~~~~g~~v~~v~~~~~-~~----------- 144 (398)
T TIGR03392 90 SINLVAQSYARP----RLQPGDEIIVSEAEHHANLIPWLM---------VAQQTGAKVVKLPIGAD-LL----------- 144 (398)
T ss_pred HHHHHHHHhhhc----cCCCCCEEEECCcchhHHHHHHHH---------HHHHcCcEEEEEecCCC-CC-----------
Confidence 999998765210 002567899999888763110000 00111123444444321 11
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
.|++++++++.+ ++.+|++.. ++|++|.+.+ +++|.++|+++|+++|+|++|. +|.. ........+|
T Consensus 145 ~~~~~l~~~i~~---~t~lv~i~~-~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~----~~~~~~~~~d 211 (398)
T TIGR03392 145 PDIRQLPELLTP---RTRILALGQ-MSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG----PPDVQALDID 211 (398)
T ss_pred cCHHHHHHHhcc---CceEEEEEC-ccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC----CCChhhcCCC
Confidence 367888888853 455566655 6999999987 8899999999999999999996 4322 1222234579
Q ss_pred eeeec--cccCCCcccceeeeecHHHHHhhhcc--CCcc--------------cc-cccCCCCCCHHHHHHHHHHHHHHh
Q psy8199 486 FLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK--NNIN--------------IF-LHSHSYSGNPLACCAALATLEIFN 546 (965)
Q Consensus 486 ivt~s--K~l~gG~~pig~v~~~~~i~~~~~~~--~~~~--------------~~-~~~~t~~~~~~~~aaa~a~L~~~~ 546 (965)
+.++| |.++. ..+|++++++++++.+..- +... +. ...+ +.|..+++++.++++.+.
T Consensus 212 ~~~~s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~G--T~~~~~~~a~~~al~~l~ 287 (398)
T TIGR03392 212 FYAFSGHKLYGP--TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAG--TPNIAGVIGLSAALEWLT 287 (398)
T ss_pred EEEEecccccCC--CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCC--CCCHHHHHHHHHHHHHHH
Confidence 99888 95432 3589999999887765320 0000 00 0011 234557777778887765
Q ss_pred cc---cHHHHHHHHHHHHHHHHHcccCCCceeee-eceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----
Q psy8199 547 KD---NILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----- 617 (965)
Q Consensus 547 ~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----- 617 (965)
+. ...++.+++.+++.+.|.++ +++... ...+.++.+.+. . . ....+.+.|.++||.++++
T Consensus 288 ~~g~~~i~~~~~~l~~~l~~~l~~l---~g~~~~~~~~~~i~~~~~~--~----~-~~~~l~~~L~~~gI~v~~g~~~~~ 357 (398)
T TIGR03392 288 DIDIAAAEAWSVSLADLAEERLAQL---PGFRSFRCPGSSLLAFDFA--G----V-HHSDLAALLAESGIALRAGQHCAQ 357 (398)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHhcC---CCeEEeCCCCCcEEEEEeC--C----c-CHHHHHHHHHhCCEEEecCccchH
Confidence 43 34455666666666666554 444322 123445555543 1 1 1235777888999998753
Q ss_pred --------CCEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 618 --------GNTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 618 --------~~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
++.+|++++...|++|++.+++.+.+.+
T Consensus 358 ~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~ 393 (398)
T TIGR03392 358 PLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAAL 393 (398)
T ss_pred HHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHH
Confidence 2589999999999999999999887643
No 285
>PLN02231 alanine transaminase
Probab=99.78 E-value=5.1e-17 Score=188.70 Aligned_cols=329 Identities=15% Similarity=0.172 Sum_probs=209.4
Q ss_pred CHHHHHHHHHHHhhc-----cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCC
Q psy8199 272 NSYINKALKNQLNKL-----EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFL 344 (965)
Q Consensus 272 ~p~v~~av~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~ 344 (965)
+.++++++.+.+... ..|+.+.+..+.+..+++.+.+..+ .+.++|++|+|+++|+..++++... .
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-------~ 214 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------S 214 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc-------C
Confidence 456666666666541 2244455666777788888776543 4567999999999999999997743 2
Q ss_pred CceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCc
Q psy8199 345 NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNK 421 (965)
Q Consensus 345 ~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~ 421 (965)
+++.|++..++|.++.......++ ..+.++........ .|+++|++++++. ..+
T Consensus 215 ~gd~Vli~~P~Y~~y~~~~~~~g~-------------~~v~~~l~~~~~~~----------~d~~~Le~~l~~~~~~~~~ 271 (534)
T PLN02231 215 EKDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDEATGWG----------LEISELKKQLEDARSKGIT 271 (534)
T ss_pred CCCEEEEeCCCChhHHHHHHHcCC-------------EEEEEecCcccCCC----------CCHHHHHHHHHHHhhcCCC
Confidence 568899999999988544333322 12233321110000 2678888888642 113
Q ss_pred EE-EEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcc-cccc-ccccc----CC---Cccee---e
Q psy8199 422 IA-AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT-GKFF-ACEHA----EI---WPDFL---C 488 (965)
Q Consensus 422 ~a-aii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~-G~~~-~~~~~----~~---~pDiv---t 488 (965)
+. .++++| +|++|.+. +.+.+++|.++|++||+++|+||+|..+-.. +..+ .+... |. ...++ +
T Consensus 272 ~k~ivl~nP--~NPTG~vl-s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S 348 (534)
T PLN02231 272 VRALVVINP--GNPTGQVL-AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQS 348 (534)
T ss_pred eEEEEEeCC--CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEec
Confidence 44 566666 89999766 7888999999999999999999999987442 3221 21111 11 12345 6
Q ss_pred eccccCC--Ccccceeeee---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH-------H----h-cccHH
Q psy8199 489 LSKGITG--GYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI-------F----N-KDNIL 551 (965)
Q Consensus 489 ~sK~l~g--G~~pig~v~~---~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~-------~----~-~~~~~ 551 (965)
|||++.| | +++|++++ ++++++.+.. ....+.+.+.++++++..+++- . + .+.+.
T Consensus 349 ~SK~~~g~pG-lRiGy~~~~~~~~~l~~~l~k-------~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~ 420 (534)
T PLN02231 349 VSKGYYGECG-KRGGYMEVTGFTSDVREQIYK-------VASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGIL 420 (534)
T ss_pred cCcccccCCc-cceEEEEEecCCHHHHHHHHH-------HHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHH
Confidence 7998743 5 89999876 6788887765 1223345567778877777731 1 0 11234
Q ss_pred HHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEE-EeecCcc-ch-----hhHHHHHHHHHH-HcCcEEeecC-----
Q psy8199 552 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFD-VIIEDPE-QI-----ETFSKKFFVAAL-KNELLLRPIG----- 618 (965)
Q Consensus 552 ~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~-~~~~~~~-~~-----~~~~~~~~~~l~-~~Gi~~~~~~----- 618 (965)
+.++++.+.+.+.|+++ +++...++.|.|+.+. +.-.... .. ......++..++ +.||.+.|+.
T Consensus 421 ~~~~~r~~~l~~~L~~~---~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~ 497 (534)
T PLN02231 421 SSLARRAKTLEDALNSL---EGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQV 497 (534)
T ss_pred HHHHHHHHHHHHHHhcC---CCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCC
Confidence 56666777777777654 5677778889988872 2100000 00 000122445454 6799998842
Q ss_pred ---CEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 619 ---NTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 619 ---~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
.++|++ +..+++++++.++++.+...
T Consensus 498 ~g~~~~Rit--~~~~~e~l~eal~RL~~~~~ 526 (534)
T PLN02231 498 PGTWHFRCT--ILPQEDKIPAIVSRLTEFHK 526 (534)
T ss_pred CCCCeEEEE--eCCCHHHHHHHHHHHHHHHH
Confidence 359998 67788999999999876443
No 286
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.78 E-value=6.1e-17 Score=182.37 Aligned_cols=321 Identities=11% Similarity=0.003 Sum_probs=203.6
Q ss_pred ecCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcC---CCCCeEEEcCChhHH
Q psy8199 250 TFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGASA 326 (965)
Q Consensus 250 d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~~~v~~~~sGseA 326 (965)
..++..++|+..|. +....+|.+.+++.+..... .|....+..+.+..+++.+.+..+ .+.+++++|+|+++|
T Consensus 23 ~~~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~ 98 (364)
T PRK07865 23 AAHPDGIVDLSVGT---PVDPVPPVIQEALAAAADAP-GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKEL 98 (364)
T ss_pred HhcCCCEEEcCCCC---CCCCCCHHHHHHHHHHHhhC-CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHH
Confidence 34556788988774 33434688888887655432 343344556777888888877654 346799999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..++.++.. .+++.|++.+++|.++.......+ ...++.+
T Consensus 99 i~~~~~~l~~-------~~gd~Vl~~~p~y~~~~~~~~~~g---------------~~~~~~~----------------- 139 (364)
T PRK07865 99 VAWLPTLLGL-------GPGDVVVIPELAYPTYEVGARLAG---------------ATVVRAD----------------- 139 (364)
T ss_pred HHHHHHHHcC-------CCCCEEEECCCCcccHHHHHHhcC---------------CEEEecC-----------------
Confidence 9887665411 256889999999987733322221 1122221
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccc-ccc--cCC-
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEH--AEI- 482 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~--~~~- 482 (965)
++++++. .++.+|++++ ++|++|.+. +.+.+++|.++|++||+++|.||+|..|...+.... ... .+.
T Consensus 140 ~~~~l~~------~~~~~v~~~~-p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 211 (364)
T PRK07865 140 SLTELGP------QRPALIWLNS-PSNPTGRVL-GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGD 211 (364)
T ss_pred ChhhCCc------ccceEEEEcC-CCCCCCccC-CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCc
Confidence 1222221 3455666665 699999877 677799999999999999999999987754443211 111 011
Q ss_pred Cccee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHH
Q psy8199 483 WPDFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQD 557 (965)
Q Consensus 483 ~pDiv---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~-~~~~~~~~~~~ 557 (965)
.+.++ +|||.++ .| +++|++++++++++.+.. .....+++.++++++++.++|+..+ .+...+.++++
T Consensus 212 ~~~~i~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 284 (364)
T PRK07865 212 HTGLLAVHSLSKQSNLAG-YRAGFVAGDPALVAELLE------VRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARR 284 (364)
T ss_pred cceEEEEeechhccCCCc-eeeEEEecCHHHHHHHHH------HHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 12333 6899885 34 899999999999887764 1222345567888888877774211 01233444555
Q ss_pred HHHHHHHHHcccCCCceeeeeceeEEE-EEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEEEeCCccc
Q psy8199 558 MKKITKALTSLITHPKIINFRQKGMIW-AFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYIL 629 (965)
Q Consensus 558 ~~~l~~~L~~l~~~~~i~~v~g~G~~~-~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~~p~~~~ 629 (965)
.+.+.+.|++. ++....+.|.++ .+.+. . ....+.+.|.++||.+.|+ .+++|++ +..
T Consensus 285 ~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~--~------~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~--~~~ 350 (364)
T PRK07865 285 RAVLRPALEAA----GFRVDHSEAGLYLWATRG--E------DCWDTVAWLAERGILVAPGDFYGPAGAQHVRVA--LTA 350 (364)
T ss_pred HHHHHHHHHHc----CCcccCCCccEEEEEeCC--C------CHHHHHHHHHHCCEEEeCccccCcCCCCEEEEE--ecC
Confidence 55555555543 343344555544 33332 1 1234667888999999873 2589999 445
Q ss_pred CHHHHHHHHHhhh
Q psy8199 630 NKNEIQHMTSAIF 642 (965)
Q Consensus 630 t~~~i~~~~~~l~ 642 (965)
++++++++++++.
T Consensus 351 ~~~~~~~~~~~l~ 363 (364)
T PRK07865 351 TDERIAAAVERLA 363 (364)
T ss_pred CHHHHHHHHHHhh
Confidence 7899999988764
No 287
>PRK08599 coproporphyrinogen III oxidase; Provisional
Probab=99.78 E-value=7.3e-18 Score=189.26 Aligned_cols=199 Identities=14% Similarity=0.166 Sum_probs=158.3
Q ss_pred CCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC---CCCEEEEeeccCCCCcccHHHHHHHHHHHHhc----
Q psy8199 690 GGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD---GATRFCMGAAWRELKDRDLDNIENMICEVKKI---- 762 (965)
Q Consensus 690 ~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~---g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~---- 762 (965)
..|+.+|.||.++...... ......++.++++++.+... +++.+++.+|. | ...+.+++.++++.+++.
T Consensus 9 PfC~~~C~yC~~~~~~~~~--~~~~~y~~~l~~Ei~~~~~~~~~~i~~i~~gGGt-p-t~l~~~~l~~ll~~i~~~~~~~ 84 (377)
T PRK08599 9 PFCEHICYYCDFNKVFIKN--QPVDEYLDALIKEMNTYAIRPFDKLKTIYIGGGT-P-TALSAEQLERLLTAIHRNLPLS 84 (377)
T ss_pred CCcCCCCCCCCCeeeccCc--cCHHHHHHHHHHHHHHhhhcCCCceeEEEeCCCC-c-ccCCHHHHHHHHHHHHHhCCCC
Confidence 5699999999987642221 11113468888888665544 56777776553 3 234466777777777652
Q ss_pred ---CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEEEec-CC
Q psy8199 763 ---GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGIIGL-SE 836 (965)
Q Consensus 763 ---~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl-~e 836 (965)
.+.+.++++.++.+.++.|+++|++++++|+|| +++.++.+++.++.++..++++.++++|++ ++.++|+|+ ||
T Consensus 85 ~~~eit~e~~p~~l~~e~l~~l~~~G~~rvsiGvqS~~~~~l~~l~r~~~~~~~~~~i~~l~~~g~~~v~~dli~GlPgq 164 (377)
T PRK08599 85 GLEEFTFEANPGDLTKEKLQVLKDSGVNRISLGVQTFNDELLKKIGRTHNEEDVYEAIANAKKAGFDNISIDLIYALPGQ 164 (377)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEeeecCCCCC
Confidence 234566889999999999999999999999999 999999999999999999999999999997 789999999 79
Q ss_pred CHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC------CCCCHHHHHHHHHHHHHHCC
Q psy8199 837 SRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS------SILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 837 t~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~------~~~~~~~~~~~ia~~R~~lp 894 (965)
|.+++.++++.+.+++ ++.+.++.++|.|||++... +.++.+...++...++..+.
T Consensus 165 t~~~~~~~l~~~~~l~--~~~i~~y~l~~~pgT~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 226 (377)
T PRK08599 165 TIEDFKESLAKALALD--IPHYSAYSLILEPKTVFYNLMRKGKLRLPGEDLEAEMYEYLMDEME 226 (377)
T ss_pred CHHHHHHHHHHHHccC--CCEEeeeceeecCCChhHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999998742 23456666777777776664
No 288
>PRK08354 putative aminotransferase; Provisional
Probab=99.78 E-value=8.1e-17 Score=176.83 Aligned_cols=295 Identities=16% Similarity=0.164 Sum_probs=190.4
Q ss_pred cCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 330 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~A 330 (965)
.+...++|+..+ .++++ +|.+.+++.+.++... .++ ....+.+.+++.++ +++++|+|+++|+..+
T Consensus 5 ~~~~~~i~l~~~--~np~~--p~~~~~a~~~~~~~~~-----~yp--~~~~l~~~ia~~~~---~~I~vt~G~~~al~~~ 70 (311)
T PRK08354 5 IREEGLIDFSAS--VNPYP--PEWLDEMFERAKEISG-----RYT--YYEWLEEEFSKLFG---EPIVITAGITEALYLI 70 (311)
T ss_pred CCccceeEecCC--CCCCC--CHHHHHHHHHHHHHhh-----cCC--ChHHHHHHHHHHHC---CCEEECCCHHHHHHHH
Confidence 344568998876 45665 5889999987765432 222 23567888888875 4799999999999877
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHH
Q psy8199 331 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 410 (965)
Q Consensus 331 l~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 410 (965)
+.++ .+++.|++.+++|.++...+...+.+ + ++.+ .|++.
T Consensus 71 ~~~~---------~~gd~vlv~~P~y~~~~~~~~~~g~~-------------~--~~~~----------------~d~~~ 110 (311)
T PRK08354 71 GILA---------LRDRKVIIPRHTYGEYERVARFFAAR-------------I--IKGP----------------NDPEK 110 (311)
T ss_pred HHhh---------CCCCeEEEeCCCcHHHHHHHHHcCCE-------------E--eecC----------------CCHHH
Confidence 6433 24678999999998885444333321 1 1111 14677
Q ss_pred HHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---
Q psy8199 411 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--- 487 (965)
Q Consensus 411 le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--- 487 (965)
|++.+++ ....++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.+|...+... . .+.++
T Consensus 111 l~~~~~~---~~~vi~~~P--~NPTG~~~-~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~-----~-~~~vi~~~ 178 (311)
T PRK08354 111 LEELVER---NSVVFFCNP--NNPDGKFY-NFKELKPLLDAVEDRNALLILDEAFIDFVKKPESP-----E-GENIIKLR 178 (311)
T ss_pred HHHhhcC---CCEEEEecC--CCCCCCcc-CHHHHHHHHHHhhhcCcEEEEeCcchhcccccccc-----C-CCcEEEEe
Confidence 7777642 235677787 89999866 77789999999999999999999998874332211 1 23344
Q ss_pred eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Q psy8199 488 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALT 566 (965)
Q Consensus 488 t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~ 566 (965)
+|||.++ .| +++|++++ +.+.+.. ....+..+.++++++.+.++ +. .++++++.+++.+..+
T Consensus 179 S~SK~~~l~G-lRiG~~v~---~~~~l~~--------~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~ 241 (311)
T PRK08354 179 TFTKSYGLPG-IRVGYVKG---FEEAFRS--------VRMPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKE 241 (311)
T ss_pred ccHhhcCCcc-ceeeeeee---hHHHHHH--------cCCCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHH
Confidence 6899887 56 89999998 4444443 11234445666665555543 11 2344444444444443
Q ss_pred cccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-----CEEEEeCCcccCHHHHHHHHHhh
Q psy8199 567 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-----NTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 567 ~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
.+.... ...+.|.|+.+++. + ..++.+.|.++||.++|+. +++||+ ....++.+++.+++
T Consensus 242 ~l~~~l---~~~~~~~~~~~~~~--~-------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~~~~l~~al 306 (311)
T PRK08354 242 RFEKAL---YVKSDANFFIKDVG--D-------AEKFVEFLKRNGILVRDCTSFGLPGYIRFS---VRDREENEKLIRAL 306 (311)
T ss_pred HHHHhc---CCCCCCcEEEEECC--C-------HHHHHHHHHHCCeEEEecccCCCCCeEEEE---eCCHHHHHHHHHHH
Confidence 331111 23566777766542 1 3457788899999999853 689999 44555667776666
Q ss_pred hc
Q psy8199 642 FQ 643 (965)
Q Consensus 642 ~~ 643 (965)
+.
T Consensus 307 ~~ 308 (311)
T PRK08354 307 RE 308 (311)
T ss_pred HH
Confidence 54
No 289
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.78 E-value=1e-16 Score=183.30 Aligned_cols=336 Identities=10% Similarity=0.044 Sum_probs=211.6
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhccc-cccCCC-----CcHHHHHHHHHHHhhcCC-CCCeEEEcCChhH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNL-----THKPVIKLSEKLSSLTQY-KLGHCFYGSDGAS 325 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~-~~~~~~-----~~~~~~~la~~l~~~~~~-~~~~v~~~~sGse 325 (965)
+..|||..+.. ..++.+++++.+.+..... ...... ..+...++.+.++++++. +.++|+|++|+++
T Consensus 23 ~~iYld~a~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAASA------QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCcccc------cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 45899987653 2678999999888764311 100111 223456788889998875 4679999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
++..+++..... ...++++|++.+..||+....... ........+..++.+.. +.
T Consensus 97 ~l~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~---------~~~~~g~~v~~v~~~~~-~~----------- 151 (406)
T PRK09295 97 GINLVANSWGNS----NVRAGDNIIISEMEHHANIVPWQM---------LCARVGAELRVIPLNPD-GT----------- 151 (406)
T ss_pred HHHHHHHHhhhh----cCCCcCEEEECcchhhHHHHHHHH---------HHHHcCcEEEEEecCCC-CC-----------
Confidence 999888754210 002457888888777664211000 00011123444443321 11
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
.|+++|++++. +++.+|++.. ++|++|.+.| +++|.++|+++|+++|+|++|+ +|.. ........+|
T Consensus 152 ~d~~~l~~~i~---~~t~lv~l~~-~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~----~~~~~~~~~D 218 (406)
T PRK09295 152 LQLETLPALFD---ERTRLLAITH-VSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH----PVDVQALDCD 218 (406)
T ss_pred CCHHHHHHhcC---CCcEEEEEec-chhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc----ccCchhcCCC
Confidence 26788888875 3456666666 6899999988 8999999999999999999996 5432 1222234578
Q ss_pred eeeec--cccCCCcccceeeeecHHHHHhhhcc--CCcc--c--cccc----------CCCCCCHHHHHHHHHHHHHHhc
Q psy8199 486 FLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK--NNIN--I--FLHS----------HSYSGNPLACCAALATLEIFNK 547 (965)
Q Consensus 486 ivt~s--K~l~gG~~pig~v~~~~~i~~~~~~~--~~~~--~--~~~~----------~t~~~~~~~~aaa~a~L~~~~~ 547 (965)
++++| |.+ |. ..+|++++++++++.+..- +... . .... -+-+.|..+++++.++|+.+.+
T Consensus 219 ~~~~s~~K~~-gp-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~ 296 (406)
T PRK09295 219 FYVFSGHKLY-GP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSA 296 (406)
T ss_pred EEEeehhhcc-CC-CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 88766 844 32 3578999998887654310 0000 0 0000 0113567788888889988765
Q ss_pred c---cHHHHHHHHHHHHHHHHHcccCCCceeeee--ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----
Q psy8199 548 D---NILQRISQDMKKITKALTSLITHPKIINFR--QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----- 617 (965)
Q Consensus 548 ~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~--g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----- 617 (965)
. .+.++.+++.+++.++|.++ +++.... ..+.++.+.+. . .....+.+.|.++||.++.+
T Consensus 297 ~g~~~i~~~~~~l~~~l~~~l~~~---~~~~~~~~~~~~~iv~~~~~--~-----~~~~~~~~~L~~~gI~v~~g~~c~~ 366 (406)
T PRK09295 297 LGLNNIAEYEQNLMHYALSQLESV---PDLTLYGPQNRLGVIAFNLG--K-----HHAYDVGSFLDNYGIAVRTGHHCAM 366 (406)
T ss_pred hCHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCCceEEEEEEC--C-----cCHHHHHHHHHhCCeEEeccccchH
Confidence 3 35566777777777777654 3333221 12445666553 1 11234667788999988642
Q ss_pred --------CCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 618 --------GNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 618 --------~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
.+.+|++|+...|++|++.+++++.+.
T Consensus 367 ~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i 401 (406)
T PRK09295 367 PLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRI 401 (406)
T ss_pred HHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 147999999999999999999988653
No 290
>PRK05799 coproporphyrinogen III oxidase; Provisional
Probab=99.77 E-value=6e-18 Score=189.91 Aligned_cols=200 Identities=20% Similarity=0.284 Sum_probs=157.6
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH-CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc----C
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS-DGATRFCMGAAWRELKDRDLDNIENMICEVKKI----G 763 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~-~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~----~ 763 (965)
-..|+.+|.||.+....+.. ......++.++++++.... .+++.+++.+|... ..+.+.+..+++.+++. +
T Consensus 10 iPfC~~~C~yC~~~~~~~~~--~~~~~y~~~l~~Ei~~~~~~~~~~~i~~gGGtps--~l~~~~l~~L~~~i~~~~~~~~ 85 (374)
T PRK05799 10 IPFCKQKCLYCDFPSYSGKE--DLMMEYIKALSKEIRNSTKNKKIKSIFIGGGTPT--YLSLEALEILKETIKKLNKKED 85 (374)
T ss_pred eCCccCCCCCCCCCcccCCc--chHHHHHHHHHHHHHhhcCCCceeEEEECCCccc--CCCHHHHHHHHHHHHhCCCCCC
Confidence 36699999999987642221 1111236778887765432 35778888766433 23345555555555442 2
Q ss_pred --cEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEEEec-CCCH
Q psy8199 764 --LETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGIIGL-SESR 838 (965)
Q Consensus 764 --~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl-~et~ 838 (965)
+.+.+++..++++.++.|+++|++++++|+|| +++.++.+++.++.++..++++.++++|+. +++++|+|+ |||.
T Consensus 86 ~eitie~~p~~~t~e~l~~l~~~G~~rvsiGvqS~~d~~L~~l~R~~~~~~~~~ai~~l~~~g~~~v~~dli~GlPgqt~ 165 (374)
T PRK05799 86 LEFTVEGNPGTFTEEKLKILKSMGVNRLSIGLQAWQNSLLKYLGRIHTFEEFLENYKLARKLGFNNINVDLMFGLPNQTL 165 (374)
T ss_pred CEEEEEeCCCcCCHHHHHHHHHcCCCEEEEECccCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCH
Confidence 33456788899999999999999999999999 999999999999999999999999999996 899999999 7999
Q ss_pred HHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC------CCCCCHHHHHHHHHHHHHHCC
Q psy8199 839 DQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG------SSILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 839 ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~------~~~~~~~~~~~~ia~~R~~lp 894 (965)
+++.++++.+.+++ ++.+.++.++|.||||+++ ...++.++..++...++..|.
T Consensus 166 e~~~~~l~~~~~l~--~~~is~y~l~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 225 (374)
T PRK05799 166 EDWKETLEKVVELN--PEHISCYSLIIEEGTPFYNLYENGKLKLPDEEEEREMYHYTIEFLK 225 (374)
T ss_pred HHHHHHHHHHHhcC--CCEEEEeccEecCCCHHHHHHhcCCCCCCChHHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999864 234677788888888877764
No 291
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.77 E-value=6.8e-17 Score=181.97 Aligned_cols=318 Identities=15% Similarity=0.166 Sum_probs=200.9
Q ss_pred CHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCC--eEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEE
Q psy8199 272 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG--HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 349 (965)
Q Consensus 272 ~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~--~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~v 349 (965)
.|.+.+++.... .+ ......+...++.+.+++.++...+ .+++++||+++++.++..... +++++
T Consensus 11 ~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~--------~~~~v 77 (355)
T TIGR03301 11 SATVRDAMLVDW---CH--WDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVP--------RDGKL 77 (355)
T ss_pred CHHHHHHhhhhc---cC--CCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccC--------CCCeE
Confidence 566666665521 11 1111236678899999998875443 577899999999999987642 45677
Q ss_pred EEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q psy8199 350 ICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEP 429 (965)
Q Consensus 350 i~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep 429 (965)
++..+++++....... .........++.+... . .|++++++++.+++ ++..|++-.
T Consensus 78 i~~~~~~~~~~~~~~a-----------~~~g~~~~~i~~~~~~-~-----------~d~~~l~~~l~~~~-~~~~v~~~~ 133 (355)
T TIGR03301 78 LVLINGAYGERLAKIC-----------EYLGIPHTDLNFSEYE-P-----------PDLNRIEEALAADP-DITHVATVH 133 (355)
T ss_pred EEECCCchhhHHHHHH-----------HHcCCceEEEecCCCC-C-----------CCHHHHHHHHHhCC-CceEEEEEe
Confidence 7777777665211110 0011123344432111 1 36788999887543 343443322
Q ss_pred ccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccceeeeecH
Q psy8199 430 LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTD 507 (965)
Q Consensus 430 ~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pig~v~~~~ 507 (965)
+++++|.+.+ +++|.++|++||+++|+|++++ +|.. .+....+ ..|++ +++|+++|+ ..+|++++++
T Consensus 134 -~~~~~G~~~~----~~~i~~l~~~~~~~livD~~~s-~g~~--~~~~~~~--~~d~~~~s~~K~l~~~-~G~g~~~~~~ 202 (355)
T TIGR03301 134 -HETTTGILNP----LEAIAKVARSHGAVLIVDAMSS-FGAI--PIDIEEL--DVDALIASANKCLEGV-PGFGFVIARR 202 (355)
T ss_pred -cCCcccchhH----HHHHHHHHHHcCCEEEEEeccc-cCCc--ccchhhc--CccEEEecCCcccccC-CceeEEEECH
Confidence 3677888876 8999999999999999999886 6522 2333333 35654 678998765 3579999999
Q ss_pred HHHHhhhccCCccccc-------------ccCCCCCCHHHHHHHHHHHHHHhccc----HHHHHHHHHHHHHHHHHcccC
Q psy8199 508 KIYNSIYYKNNINIFL-------------HSHSYSGNPLACCAALATLEIFNKDN----ILQRISQDMKKITKALTSLIT 570 (965)
Q Consensus 508 ~i~~~~~~~~~~~~~~-------------~~~t~~~~~~~~aaa~a~L~~~~~~~----~~~~~~~~~~~l~~~L~~l~~ 570 (965)
++++.+.. ...++. ....++.++.++.++.++|+.+.+++ ..++.+++.+++.+.|+++ .
T Consensus 203 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g 279 (355)
T TIGR03301 203 DLLEASAG--NARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-G 279 (355)
T ss_pred HHHHHhhC--CCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 98887652 111110 01234567788888888888775433 4566777888888888765 1
Q ss_pred CCcee-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC----CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 571 HPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG----NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 571 ~~~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
...+. .....+.++.+.+. ... ......+.+.|.++||.+.++. +.+||+++..++.++++++++.+.++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 280 FQPLLPERWQSPIIVSFLYP-DDP---DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CeeecCCCCCCCcEEEEECC-CCC---cchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 11111 11223445555543 110 0113467888999999998753 68999988888999999999988653
No 292
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.77 E-value=6.9e-17 Score=183.89 Aligned_cols=337 Identities=10% Similarity=0.016 Sum_probs=206.1
Q ss_pred ccccccccchhccCCCCC--HHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcCC--CCCeE--EEcCChhHH
Q psy8199 255 RYLDAISSWWVNLFGHSN--SYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQY--KLGHC--FYGSDGASA 326 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~--p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v--~~~~sGseA 326 (965)
..+|+..|..+.+-++.+ +.+.+++.+.++.. ..|....+..+.++.+++.+.+..+. +.+++ +.|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 568888876433333333 67888887766432 23444556677777888777655321 45666 999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCC-CCCCCCCCCChhHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIAR 405 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 405 (965)
+..++++.... .+++.|++.+++|.++.......+. .++.+|.. .....
T Consensus 107 l~~~~~~l~~~------~pGd~Vlv~~P~y~~~~~~~~~~g~-------------~~v~v~~~~~~~~~----------- 156 (396)
T PRK09257 107 LRVGADFLKRA------FPDAKVWVSDPTWPNHRAIFEAAGL-------------EVKTYPYYDAATKG----------- 156 (396)
T ss_pred HHHHHHHHHHh------CCCCeEEECCCCcccHHHHHHHcCC-------------cEEEEeccccccCc-----------
Confidence 99998755321 2568999999999988443333222 33344431 11111
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcc-cc-cccccc-cCC
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT-GK-FFACEH-AEI 482 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~-G~-~~~~~~-~~~ 482 (965)
.|++++++++.+...+..++++.. .+|++|.+. +.+.+++|.++|++||+++|.||+|.+|... +. ...... .+.
T Consensus 157 ~d~~~l~~~~~~~~~~~~~~i~~~-p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~ 234 (396)
T PRK09257 157 LDFDAMLADLSQAPAGDVVLLHGC-CHNPTGADL-TPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAA 234 (396)
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhc
Confidence 378888888865433344555444 599999876 7888999999999999999999999988532 11 111111 122
Q ss_pred Cccee---eeccccCC-Ccccceeeee---cHHH----HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH------
Q psy8199 483 WPDFL---CLSKGITG-GYLPLSLVMT---TDKI----YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF------ 545 (965)
Q Consensus 483 ~pDiv---t~sK~l~g-G~~pig~v~~---~~~i----~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~------ 545 (965)
.++++ +|||.++- | +++|++++ +++. +..+.. .......+.+++++.++.+.|+.-
T Consensus 235 ~~~vi~i~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 307 (396)
T PRK09257 235 GLELLVASSFSKNFGLYG-ERVGALSVVAEDAEEADRVLSQLKA------TIRTNYSNPPAHGAAIVATILNDPELRAEW 307 (396)
T ss_pred CCcEEEEEEcCCcCcccc-ccceeEEEEeCCHHHHHHHHHHHHH------HhhhhcCCCcHHHHHHHHHHhCCHHHHHHH
Confidence 23444 68998875 6 89999873 3333 333322 111222334677777777776421
Q ss_pred h--cccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEE-EEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEE
Q psy8199 546 N--KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVY 622 (965)
Q Consensus 546 ~--~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i-~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR 622 (965)
. -+...+.++++.+.+.+.|++...-..+....+.|.|+.+ .+. ...+.+.+.++||.+.|.+ |
T Consensus 308 ~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~----------~~~~~~l~~~~~V~~~p~~---r 374 (396)
T PRK09257 308 EAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT----------PEQVDRLREEFGVYAVGSG---R 374 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCC----------HHHHHHHHHcCCEEEcCCC---e
Confidence 0 0124455566666666666554110123444555555444 331 1233445568899998853 7
Q ss_pred EeCCcccCHHHHHHHHHhhhcc
Q psy8199 623 LMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 623 ~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
|+.+ ..++++++++++++.++
T Consensus 375 i~~~-~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 375 INVA-GLNESNIDYVAEAIAAV 395 (396)
T ss_pred EEEe-eCCHHHHHHHHHHHHhh
Confidence 8732 38999999999988653
No 293
>PRK05660 HemN family oxidoreductase; Provisional
Probab=99.77 E-value=2e-17 Score=184.61 Aligned_cols=198 Identities=12% Similarity=0.171 Sum_probs=156.4
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCC----HHHHHHHHHHHH----HCCCCEEEEeeccCCCCcccHHHHHHHHHHHH
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILS----IESVITAAQKAK----SDGATRFCMGAAWRELKDRDLDNIENMICEVK 760 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~----~eei~~~~~~~~----~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~ 760 (965)
-..|+.+|.||.+.+..... ..+ .+.++++++... ..+++.|+|.||.. ...+.+.+.++++.++
T Consensus 13 iPFC~~~C~yC~f~~~~~~~-----~~~~~~Y~~~l~~Ei~~~~~~~~~~~v~ti~~GGGtP--s~l~~~~l~~ll~~l~ 85 (378)
T PRK05660 13 IPWCVQKCPYCDFNSHALKG-----EVPEDEYVDHLLADLDADLPLVQGREVHSIFIGGGTP--SLFSAEAIQRLLDGVR 85 (378)
T ss_pred eCCccCcCCCCCCeecCCCC-----cCCHHHHHHHHHHHHHHHhHhccCCceeEEEeCCCcc--ccCCHHHHHHHHHHHH
Confidence 36799999999987542111 122 233444443211 24688899877743 3445677777777776
Q ss_pred h-----c--CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEE
Q psy8199 761 K-----I--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGI 831 (965)
Q Consensus 761 ~-----~--~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i 831 (965)
+ . .+.+.++++.++.+.++.|+++|++++++|+|| +++.++.+++.++.++.+++++.++++|+. ++..+|
T Consensus 86 ~~~~~~~~~eit~e~np~~l~~e~l~~Lk~~Gv~risiGvqS~~~~~L~~l~r~~~~~~~~~ai~~~~~~G~~~v~~dli 165 (378)
T PRK05660 86 ARLPFAPDAEITMEANPGTVEADRFVGYQRAGVNRISIGVQSFSEEKLKRLGRIHGPDEAKRAAKLAQGLGLRSFNLDLM 165 (378)
T ss_pred HhCCCCCCcEEEEEeCcCcCCHHHHHHHHHcCCCEEEeccCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEee
Confidence 5 2 244566889999999999999999999999999 999999999999999999999999999995 689999
Q ss_pred Eec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC--CCCCHHHHHHHHHHHHHHCCC
Q psy8199 832 IGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS--SILDPLEFIRTIAVARITMPT 895 (965)
Q Consensus 832 ~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~--~~~~~~~~~~~ia~~R~~lp~ 895 (965)
+|+ ++|.+++.++++.+.+++ ++.+.++.++|.|||++... ..++.++...+...+...+..
T Consensus 166 ~Glpgqt~~~~~~~l~~~~~l~--p~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 230 (378)
T PRK05660 166 HGLPDQSLEEALDDLRQAIALN--PPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTA 230 (378)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--CCeEEeeccEeccCCcccccCCCCcCHHHHHHHHHHHHHHHHH
Confidence 999 699999999999999999 99999999999999999864 234566777777777776643
No 294
>PRK09058 coproporphyrinogen III oxidase; Provisional
Probab=99.77 E-value=2.2e-17 Score=188.06 Aligned_cols=200 Identities=13% Similarity=0.184 Sum_probs=161.0
Q ss_pred CCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH------CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc-
Q psy8199 690 GGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS------DGATRFCMGAAWRELKDRDLDNIENMICEVKKI- 762 (965)
Q Consensus 690 ~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~------~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~- 762 (965)
..|+.+|.||.|....... .......+.++++++...+ ..++.|+|.||. | ...+.+.+.++++.+++.
T Consensus 69 PFC~~~C~yC~f~~~~~~~--~~~~~Y~~~L~~Ei~~~~~~~~~~~~~i~~iy~GGGT-P-s~L~~~~l~~ll~~i~~~~ 144 (449)
T PRK09058 69 PFCRTHCTFCGFFQNAWNP--EAVARYTDALIRELAMEADSPLTQSAPIHAVYFGGGT-P-TALSAEDLARLITALREYL 144 (449)
T ss_pred CCcCCcCCCCCCcCcCCch--hhHHHHHHHHHHHHHHHhhccccCCCeeeEEEECCCc-c-ccCCHHHHHHHHHHHHHhC
Confidence 5699999999986531111 1111346777888776543 247778886664 2 345567777777777651
Q ss_pred ------CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcC-CceeeeEEEec
Q psy8199 763 ------GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVG-INICCGGIIGL 834 (965)
Q Consensus 763 ------~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~G-i~v~~~~i~Gl 834 (965)
.+.+.+++..++++.++.|+++|++++++|+|| ++++++.+.+.++.++..++++.++++| ..+++.+|+|+
T Consensus 145 ~l~~~~eitiE~~p~~~t~e~l~~l~~aGvnRiSiGVQSf~d~vLk~lgR~~~~~~~~~~i~~l~~~g~~~v~~DlI~Gl 224 (449)
T PRK09058 145 PLAPDCEITLEGRINGFDDEKADAALDAGANRFSIGVQSFNTQVRRRAGRKDDREEVLARLEELVARDRAAVVCDLIFGL 224 (449)
T ss_pred CCCCCCEEEEEeCcCcCCHHHHHHHHHcCCCEEEecCCcCCHHHHHHhCCCCCHHHHHHHHHHHHhCCCCcEEEEEEeeC
Confidence 233555788899999999999999999999999 9999999999999999999999999999 58999999999
Q ss_pred -CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC------CCCC-CHHHHHHHHHHHHHHCCC
Q psy8199 835 -SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG------SSIL-DPLEFIRTIAVARITMPT 895 (965)
Q Consensus 835 -~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~------~~~~-~~~~~~~~ia~~R~~lp~ 895 (965)
|+|.+++.++++.+.+++ ++.|.++.+.|.|||++++ .+++ +.++..++...++..|..
T Consensus 225 PgqT~e~~~~~l~~~~~l~--~~~is~y~L~~~pgT~l~~~~~~g~l~~~~~~~~~~~my~~~~~~L~~ 291 (449)
T PRK09058 225 PGQTPEIWQQDLAIVRDLG--LDGVDLYALNLLPGTPLAKAVEKGKLPPPATPAERADMYAYGVEFLAK 291 (449)
T ss_pred CCCCHHHHHHHHHHHHhcC--CCEEEEeccccCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 799999999999999999 9999999999999999875 2334 778888999998888753
No 295
>TIGR00539 hemN_rel putative oxygen-independent coproporphyrinogen III oxidase. Experimentally determined examples of oxygen-independent coproporphyrinogen III oxidase, an enzyme that replaces HemF function under anaerobic conditions, belong to a family of proteins described by the model hemN. This model, hemN_rel, models a closely related protein, shorter at the amino end and lacking the region containing the motif PYRT[SC]YP found in members of the hemN family. Several species, including E. coli, Helicobacter pylori, Aquifex aeolicus, and Chlamydia trachomatis, have members of both this family and the E. coli hemN family. The member of this family from Bacillus subtilis was shown to complement an hemF/hemN double mutant of Salmonella typimurium and to prevent accumulation of coproporphyrinogen III under anaerobic conditions, but the exact role of this protein is still uncertain. It is found in a number of species that do not synthesize heme de novo.
Probab=99.77 E-value=8.6e-18 Score=187.08 Aligned_cols=201 Identities=13% Similarity=0.140 Sum_probs=154.3
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHH-HHCC---CCEEEEeeccCCCCcccHHHHHHHHHHHHh---
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKA-KSDG---ATRFCMGAAWRELKDRDLDNIENMICEVKK--- 761 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~-~~~g---~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~--- 761 (965)
-..|+.+|.||.+....... .... .-.+.+.+++... ...+ ++.+++.||... ..+.+.+.++++.+++
T Consensus 7 iPFC~~~C~yC~f~~~~~~~-~~~~-~y~~~l~~Ei~~~~~~~~~~~v~~i~~GGGtPs--~l~~~~l~~ll~~i~~~~~ 82 (360)
T TIGR00539 7 IPFCENKCGYCDFNSYENKS-GPKE-EYTQALCQDLKHALSQTDQEPLESIFIGGGTPN--TLSVEAFERLFESIYQHAS 82 (360)
T ss_pred eCCCcCcCCCCCCcccCcCc-cCHH-HHHHHHHHHHHHHHHhcCCCcccEEEeCCCchh--cCCHHHHHHHHHHHHHhCC
Confidence 36799999999987642211 0000 0134444444432 2233 778888777432 3345666666655553
Q ss_pred --cC--cEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEEEec-
Q psy8199 762 --IG--LETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGIIGL- 834 (965)
Q Consensus 762 --~~--~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl- 834 (965)
.+ +.+.++++.++++.++.|+++|++++++|+|| ++++++.+.+.+++++..++++.++++|+. ++.++|+|+
T Consensus 83 ~~~~~eitie~np~~lt~e~l~~l~~~Gv~risiGvqS~~~~~l~~lgR~~~~~~~~~ai~~l~~~G~~~v~~dli~GlP 162 (360)
T TIGR00539 83 LSDDCEITTEANPELITAEWCKGLKGAGINRLSLGVQSFRDDKLLFLGRQHSAKNIAPAIETALKSGIENISLDLMYGLP 162 (360)
T ss_pred CCCCCEEEEEeCCCCCCHHHHHHHHHcCCCEEEEecccCChHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEeccCCCC
Confidence 22 34566889999999999999999999999999 999999999999999999999999999995 899999999
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC--CCCCHHHHHHHHHHHHHHCCC
Q psy8199 835 SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS--SILDPLEFIRTIAVARITMPT 895 (965)
Q Consensus 835 ~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~--~~~~~~~~~~~ia~~R~~lp~ 895 (965)
++|.+++.++++.+.+++ ++.+.++.++|.|||++++. ..++.++..++...++..+..
T Consensus 163 gqt~~~~~~~l~~~~~l~--~~~is~y~l~~~~gT~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 223 (360)
T TIGR00539 163 LQTLNSLKEELKLAKELP--INHLSAYALSVEPNTNFEKNAKKLPDDDSCAHFDEVVREILEG 223 (360)
T ss_pred CCCHHHHHHHHHHHHccC--CCEEEeecceEcCCChhhhhhhcCcCHHHHHHHHHHHHHHHHH
Confidence 799999999999999999 99999999999999999863 235677777887777776643
No 296
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.76 E-value=2.1e-16 Score=180.33 Aligned_cols=344 Identities=13% Similarity=0.044 Sum_probs=204.8
Q ss_pred CCcccccccccchhc-cCCCCCHHHHHHHHHHHhhc--cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHH
Q psy8199 252 SGKRYLDAISSWWVN-LFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASA 326 (965)
Q Consensus 252 dG~~ylD~~~~~~~~-~lGh~~p~v~~av~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA 326 (965)
.|..++|+..|.... +.=..++++.+++.+.+... ..+....+..+.+..+++.+....+ ...+++++++||++|
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a 108 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence 477899998876531 11124688999998877542 1222222333344555555543222 235689999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIAR 405 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 405 (965)
+..+++.... ++++|++.+++|.++...+...+ ..+..++.+.. ...
T Consensus 109 l~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~----------- 156 (403)
T TIGR01265 109 IEICIEALAN--------PGANILVPRPGFPLYDTRAAFSG-------------LEVRLYDLLPEKDWE----------- 156 (403)
T ss_pred HHHHHHHhCC--------CCCEEEEeCCCchhHHHHHHHcC-------------CEEEEecCCcccCCc-----------
Confidence 9999987642 56789999998866532221111 12333332111 111
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccccCCCc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWP 484 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~~~p 484 (965)
.|++++++++.. ....++++.| +|++|.+. +.+.+++|.++|+++|+++|+||+|..|...+.. .....+.-.+
T Consensus 157 ~d~~~l~~~~~~--~~~~v~i~~p--~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 231 (403)
T TIGR01265 157 IDLDGLEALADE--KTVAIVVINP--SNPCGSVF-SRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIV 231 (403)
T ss_pred cCHHHHHHHhCc--CccEEEEecC--CCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCC
Confidence 267888877742 2334455555 88999765 6677999999999999999999999988544432 2222221122
Q ss_pred cee---eeccccCCCcccceeeeec--HH-----HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc---ccHH
Q psy8199 485 DFL---CLSKGITGGYLPLSLVMTT--DK-----IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNIL 551 (965)
Q Consensus 485 Div---t~sK~l~gG~~pig~v~~~--~~-----i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~---~~~~ 551 (965)
+++ +|||.++..++++|+++++ ++ +++.+.. ....+.+.+++++.++.++|+.-.+ ....
T Consensus 232 ~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 304 (403)
T TIGR01265 232 PVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKN-------LLQRILGPATIVQGALPDILENTPQEFFDGKI 304 (403)
T ss_pred cEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHH-------HhhhhcCCChHHHHHHHHHHHhChHHHHHHHH
Confidence 344 6899854433899999874 23 3333322 1112455688888888888853111 1234
Q ss_pred HHHHHHHHHHHHHHHcccCCCceeeeec-eeEEEEEEEeecCccchhhHHHHHHHHH-HHcCcEEeecC-----CEEEEe
Q psy8199 552 QRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPIG-----NTVYLM 624 (965)
Q Consensus 552 ~~~~~~~~~l~~~L~~l~~~~~i~~v~g-~G~~~~i~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~-----~~lR~~ 624 (965)
++++++.+.+.+.|+. ++++..+.+ .|+++.+.+. ............+...+ .++||.+.|+. +++|++
T Consensus 305 ~~~~~~~~~l~~~L~~---~~~~~~~~p~~g~f~~~~~~-~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis 380 (403)
T TIGR01265 305 SVLKSNAELCYEELKD---IPGLVCPKPEGAMYLMVKLE-LELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRIT 380 (403)
T ss_pred HHHHHHHHHHHHHHhc---CCCceecCCCceeEEEEecc-ccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEE
Confidence 4455555556665544 345543334 4667777664 11000000133565664 57899998742 689999
Q ss_pred CCcccCHHHHHHHHHhhhccc
Q psy8199 625 PPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 625 p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+...++.+++.++++.+.+
T Consensus 381 --~~~~~~~l~~~l~~l~~~~ 399 (403)
T TIGR01265 381 --ITVPESMLEEACSRIKEFC 399 (403)
T ss_pred --ecCCHHHHHHHHHHHHHHH
Confidence 5567888888888876543
No 297
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.76 E-value=2.6e-16 Score=179.86 Aligned_cols=328 Identities=12% Similarity=0.089 Sum_probs=202.2
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCC-----CcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-----THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVE 328 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~ 328 (965)
..|||..+. |-.++.+.+++.+.+..........+ ..+...++.+.++++++...+.+++++|+++++.
T Consensus 18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 478987654 33688999999988765311100111 2244678889999998766668999999999988
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.++....... .++++|++.++.|++......... ......+..++.+...+. .|+
T Consensus 92 ~~~~~~~~~~-----~~gd~vl~~~~~~~s~~~~~~~~~---------~~~g~~~~~~~~~~~~~~-----------~~~ 146 (397)
T TIGR01976 92 LLSRAISRRW-----GPGDEVIVTRLDHEANISPWLQAA---------ERAGAKVKWARVDEATGE-----------LHP 146 (397)
T ss_pred HHHHHHHhcC-----CCCCEEEEcCCchHhHHHHHHHHH---------HhcCCEEEEEeccccCCC-----------cCH
Confidence 7776553211 245788888877655311100000 000112334443211111 367
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceee
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC 488 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt 488 (965)
+++++.+. +++.+|+++. +++++|.+.+ +++|.++|++||+++|+||++. +|. + ........+|+++
T Consensus 147 ~~l~~~i~---~~~~lv~i~~-~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~-~---~~~~~~~~~d~~~ 213 (397)
T TIGR01976 147 DDLASLLS---PRTRLVAVTA-ASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APH-G---LIDVQATGADFLT 213 (397)
T ss_pred HHHHHhcC---CCceEEEEeC-CCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-ccc-c---CCCHHHcCCCEEE
Confidence 88888885 3456666666 6899999887 9999999999999999999985 331 1 1112223478775
Q ss_pred --eccccCCCcccceeeeecHHHHHhhhccCC-------cccccccCCCCCCHHHHHHHHHHHHHHhccc----------
Q psy8199 489 --LSKGITGGYLPLSLVMTTDKIYNSIYYKNN-------INIFLHSHSYSGNPLACCAALATLEIFNKDN---------- 549 (965)
Q Consensus 489 --~sK~l~gG~~pig~v~~~~~i~~~~~~~~~-------~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~---------- 549 (965)
++|.+ | .++|++++++++++.+..... ...+ ..+ +.+...+++..++++.+.+.+
T Consensus 214 ~s~~K~~--g-~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~-~~g--t~~~~~~~~l~~al~~~~~~g~~~~~~~~~~ 287 (397)
T TIGR01976 214 CSAYKFF--G-PHMGILWGRPELLMNLPPYKLTFSYDTGPERF-ELG--TPQYELLAGVVAAVDYLAGLGESANGSRRER 287 (397)
T ss_pred Eechhhc--C-CceEEEEEcHHHHhhCCCccccCccCCCcchh-cCC--CCCHHHHHHHHHHHHHHHHhCcccccchhhh
Confidence 56876 3 478999999998876653100 0001 111 234455566666676654321
Q ss_pred -------HHHHHHHHHHHHHHHHHcccCCCceeeee-----ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec
Q psy8199 550 -------ILQRISQDMKKITKALTSLITHPKIINFR-----QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 617 (965)
Q Consensus 550 -------~~~~~~~~~~~l~~~L~~l~~~~~i~~v~-----g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 617 (965)
..++..++.+++++.|+++ +++..+. ..+.++.+.+. + .....+.++|.++||+++.+
T Consensus 288 ~~~~~~~~~~~~~~l~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~l~~~L~~~gI~v~~~ 357 (397)
T TIGR01976 288 LVASFQAIDAYENRLAEYLLVGLSDL---PGVTLYGVARLAARVPTVSFTVH--G-----LPPQRVVRRLADQGIDAWAG 357 (397)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCccCCCceEEEEeC--C-----cCHHHHHHHHHHCCeEEEeC
Confidence 2344455666666666554 3333222 24556665543 1 11345778899999999753
Q ss_pred ----------------CCEEEEeCCcccCHHHHHHHHHhh
Q psy8199 618 ----------------GNTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 618 ----------------~~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
++.+|++++...++++++++++.+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 358 HFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred ccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 258999999999999999998764
No 298
>PRK09057 coproporphyrinogen III oxidase; Provisional
Probab=99.76 E-value=2.9e-17 Score=183.64 Aligned_cols=202 Identities=9% Similarity=0.114 Sum_probs=163.4
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH----CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS----DGATRFCMGAAWRELKDRDLDNIENMICEVKKI-- 762 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~----~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~-- 762 (965)
-..|...|.||.|.+...... .. ..-.+.+.++++...+ ..++.++|.||. +...+.+.+.++++.+++.
T Consensus 11 IPFC~~kC~yC~f~~~~~~~~-~~-~~Y~~aL~~Ei~~~~~~~~~~~i~tiy~GGGT--Ps~l~~~~L~~ll~~i~~~f~ 86 (380)
T PRK09057 11 WPFCLAKCPYCDFNSHVRHAI-DQ-ARFAAAFLRELATEAARTGPRTLTSIFFGGGT--PSLMQPETVAALLDAIARLWP 86 (380)
T ss_pred eCCcCCcCCCCCCcccCcCcC-CH-HHHHHHHHHHHHHHHHHcCCCCcCeEEeCCCc--cccCCHHHHHHHHHHHHHhCC
Confidence 367999999999876422111 00 0124666677664433 357889987774 3355677777888777751
Q ss_pred -----CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec-C
Q psy8199 763 -----GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-S 835 (965)
Q Consensus 763 -----~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl-~ 835 (965)
.+.+.+++..++.+.++.|+++|++++++|+|| ++++++.+.+.++.++..++++.+++++..++..+|+|+ |
T Consensus 87 ~~~~~eit~E~~P~~i~~e~L~~l~~~GvnrislGvQS~~d~vL~~l~R~~~~~~~~~ai~~~~~~~~~v~~dli~GlPg 166 (380)
T PRK09057 87 VADDIEITLEANPTSVEAGRFRGYRAAGVNRVSLGVQALNDADLRFLGRLHSVAEALAAIDLAREIFPRVSFDLIYARPG 166 (380)
T ss_pred CCCCccEEEEECcCcCCHHHHHHHHHcCCCEEEEecccCCHHHHHHcCCCCCHHHHHHHHHHHHHhCccEEEEeecCCCC
Confidence 345667899999999999999999999999999 999999999999999999999999999889999999999 7
Q ss_pred CCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC------CCCCCHHHHHHHHHHHHHHCCCC
Q psy8199 836 ESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG------SSILDPLEFIRTIAVARITMPTS 896 (965)
Q Consensus 836 et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~------~~~~~~~~~~~~ia~~R~~lp~~ 896 (965)
+|.+++.++++.+.+++ ++.|.++.++|.|||++++ ...++.++..++...++.+|...
T Consensus 167 qt~~~~~~~l~~~~~l~--p~~is~y~L~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~ 231 (380)
T PRK09057 167 QTLAAWRAELKEALSLA--ADHLSLYQLTIEEGTAFYGLHAAGKLILPDEDLAADLYELTQEITAAA 231 (380)
T ss_pred CCHHHHHHHHHHHHhcC--CCeEEeecceecCCChHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHc
Confidence 99999999999999999 9999999999999999875 23467788888888888887543
No 299
>PLN02368 alanine transaminase
Probab=99.76 E-value=4.8e-17 Score=183.36 Aligned_cols=256 Identities=14% Similarity=0.114 Sum_probs=171.4
Q ss_pred ccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCcccccc
Q psy8199 288 HVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA 365 (965)
Q Consensus 288 ~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~ 365 (965)
+|....+..+.++.+++.+.+..+ .+.++|++|+|+++|+..++.+... .+++.|++.+++|.++......
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-------~pGd~Vli~~P~Y~~y~~~~~~ 174 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIR-------GEKDGVLVPVPQYPLYSATISL 174 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcC-------CCCCEEEEeCCCCccHHHHHHH
Confidence 344444556778888888876644 3567999999999999999887642 2578899999999988544333
Q ss_pred ccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCcEE-EEEEccccccCCCcccCC
Q psy8199 366 VTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIA-AIIIEPLVQCAGGMIMYD 441 (965)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a-aii~ep~v~~~~G~~~~~ 441 (965)
.++ .++.+|........ .|+++|++.+.+. ..++. .++++| +|++|.+. +
T Consensus 175 ~g~-------------~~v~v~~~~~~~~~----------~d~~~le~~i~~~~~~~~~~k~l~l~nP--~NPTG~v~-s 228 (407)
T PLN02368 175 LGG-------------TLVPYYLEESENWG----------LDVNNLRQSVAQARSKGITVRAMVIINP--GNPTGQCL-S 228 (407)
T ss_pred cCC-------------EEEEEecccccCCC----------CCHHHHHHHHHHHhhcCCCeEEEEEECC--CCCCCccC-C
Confidence 332 22333332111000 2678888888632 11345 566666 99999876 7
Q ss_pred hHHHHHHHHHHHhcCCeEEEeccccCCCcccc--cccc-ccc-CC------Cccee---eeccccC--CCcccceeee--
Q psy8199 442 SIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFAC-EHA-EI------WPDFL---CLSKGIT--GGYLPLSLVM-- 504 (965)
Q Consensus 442 ~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~~~-~~~-~~------~pDiv---t~sK~l~--gG~~pig~v~-- 504 (965)
.+.+++|.++|++||+++|.||+|..+...+. +.+. +.. ++ .+.++ +|||++. .| |++|+++
T Consensus 229 ~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~G-lRiGy~i~~ 307 (407)
T PLN02368 229 EANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECG-QRGGYFEMT 307 (407)
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCc-cceEEEEEe
Confidence 88899999999999999999999998754442 2121 111 11 12444 5799873 35 8999998
Q ss_pred -ecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH-----------hc-ccHHHHHHHHHHHHHHHHHcccCC
Q psy8199 505 -TTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF-----------NK-DNILQRISQDMKKITKALTSLITH 571 (965)
Q Consensus 505 -~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~-----------~~-~~~~~~~~~~~~~l~~~L~~l~~~ 571 (965)
+++++++.+.. . ...+++.+.+++.++.++|+-- ++ ..+.+..+++.+.+.+.|+++
T Consensus 308 ~~~~~li~~~~~------~-~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~--- 377 (407)
T PLN02368 308 NIPPKTVEEIYK------V-ASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC--- 377 (407)
T ss_pred CCCHHHHHHHHH------H-hcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---
Confidence 48888888765 1 2235667889999999988521 10 123455566666666666554
Q ss_pred CceeeeeceeEEEEEE
Q psy8199 572 PKIINFRQKGMIWAFD 587 (965)
Q Consensus 572 ~~i~~v~g~G~~~~i~ 587 (965)
+++....++|.|+.+.
T Consensus 378 ~g~~~~~P~Gafy~~~ 393 (407)
T PLN02368 378 KNVVCNFTEGAMYSFP 393 (407)
T ss_pred CCeEeCCCCeeeEecc
Confidence 6777888999998874
No 300
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.76 E-value=2.9e-16 Score=177.96 Aligned_cols=328 Identities=12% Similarity=0.112 Sum_probs=205.7
Q ss_pred cccccccchhccCCCCCHHHHHHHHHHHhhccccccCCC-------CcHHHHHHHHHHHhhcCCC-CCeEEEcCChhHHH
Q psy8199 256 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-------THKPVIKLSEKLSSLTQYK-LGHCFYGSDGASAV 327 (965)
Q Consensus 256 ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~-------~~~~~~~la~~l~~~~~~~-~~~v~~~~sGseA~ 327 (965)
|||..+ .|-.+|.+.+++.+.+...... ...+ ......++.+.+++.++.. .+++++++|+++|+
T Consensus 2 yl~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~ 74 (373)
T cd06453 2 YLDNAA------TSQKPQPVIDAIVDYYRHYNAN-VHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAI 74 (373)
T ss_pred cccCcc------ccCCCHHHHHHHHHHHHhcCCC-CCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHH
Confidence 677654 3446889999998877543111 1111 1233456778888888755 56899999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHH
Q psy8199 328 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 407 (965)
Q Consensus 328 ~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 407 (965)
..+++.+... ..++++|++.++.|.+......... ......+..++.... +. .|
T Consensus 75 ~~~~~~l~~~-----~~~g~~vl~~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~-~~-----------~d 128 (373)
T cd06453 75 NLVAYGLGRA-----NKPGDEIVTSVMEHHSNIVPWQQLA---------ERTGAKLKVVPVDDD-GQ-----------LD 128 (373)
T ss_pred HHHHHHhhhc-----CCCCCEEEECcchhHHHHHHHHHHH---------hhcCcEEEEeecCCC-CC-----------cC
Confidence 9999876430 0145778888776654211000000 001113344443211 11 36
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee
Q psy8199 408 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL 487 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv 487 (965)
++++++.+.+ ++.+|++.. +++++|.+.+ +++|.++|++||+++|+|++++ +|.. ........+|++
T Consensus 129 ~~~l~~~l~~---~~~~v~~~~-~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~~d~~ 195 (373)
T cd06453 129 LEALEKLLTE---RTKLVAVTH-VSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHM----PVDVQDLGCDFL 195 (373)
T ss_pred HHHHHHHhcC---CceEEEEeC-cccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCce----eeeccccCCCEE
Confidence 7888888853 566677666 6888998887 8899999999999999999986 4332 112223457999
Q ss_pred eec--cccCCCcccceeeeecHHHHHhhhccCCc----cc-------c---c-ccCCCCCCHHHHHHHHHHHHHHhccc-
Q psy8199 488 CLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNI----NI-------F---L-HSHSYSGNPLACCAALATLEIFNKDN- 549 (965)
Q Consensus 488 t~s--K~l~gG~~pig~v~~~~~i~~~~~~~~~~----~~-------~---~-~~~t~~~~~~~~aaa~a~L~~~~~~~- 549 (965)
++| |.+++ ..+|++++++++++.+..-... .. + . .....+.+..++.+..++++.+.+.+
T Consensus 196 ~~s~~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~ 273 (373)
T cd06453 196 AFSGHKMLGP--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGM 273 (373)
T ss_pred EeccccccCC--CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCH
Confidence 888 98876 4689999999888766531000 00 0 0 00011234445556666777766543
Q ss_pred --HHHHHHHHHHHHHHHHHcccCCCceeee---eceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------
Q psy8199 550 --ILQRISQDMKKITKALTSLITHPKIINF---RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------- 617 (965)
Q Consensus 550 --~~~~~~~~~~~l~~~L~~l~~~~~i~~v---~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------- 617 (965)
+.++.+++.+++.+.|+++ +++..+ ...+.++.+.+. + ....++.+.|.++||.+.++
T Consensus 274 ~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~i~~~l~~~gi~i~~g~~~~~~~ 343 (373)
T cd06453 274 EAIAAHEHELTAYALERLSEI---PGVRVYGDAEDRAGVVSFNLE--G-----IHPHDVATILDQYGIAVRAGHHCAQPL 343 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---CCeEEeCCccccCCeEEEEEC--C-----cCHHHHHHHHHHCCEEeccCccchhHH
Confidence 4555566666666666554 444322 234667777653 1 11346778889999988632
Q ss_pred ------CCEEEEeCCcccCHHHHHHHHHhh
Q psy8199 618 ------GNTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 618 ------~~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
.+.+|++++..+++++++++++.+
T Consensus 344 ~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 344 MRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 358999999999999999998764
No 301
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.75 E-value=9.2e-17 Score=180.84 Aligned_cols=297 Identities=9% Similarity=0.048 Sum_probs=183.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccch
Q psy8199 296 HKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 375 (965)
Q Consensus 296 ~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~ 375 (965)
++...++.+.++++++ .+.+.+++||++|+..++..... ++++|++....|+.. +.+....+
T Consensus 50 ~~~~~~~~e~lA~~~g--~~~~~i~~g~~~a~~~~~~~l~~--------~gd~Vl~~~~~h~s~-~~~~~~~g------- 111 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLG--MDEARVTHGAREGKFAVMHALCK--------EGDWVVLDGLAHYTS-YVAAERAG------- 111 (370)
T ss_pred chHHHHHHHHHHHHhC--CCceEEECChHHHHHHHHHHhhC--------CCCEEEECCcccHHH-HHHHHHcC-------
Confidence 3466778888999984 56788899999999999886642 456777755554332 22222221
Q ss_pred hcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC----CCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 376 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN----HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~----~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
..+..+|........ .|+++|++.+.+. ..++.+|+++. +++++|.+.+ +++|.++
T Consensus 112 -----~~~~~~~~~~~~~~~----------~d~~~l~~~l~~~~~~~~~~~~lv~~~~-p~~~~G~~~~----l~~i~~l 171 (370)
T TIGR02539 112 -----LNVKEVPHTGHPEYK----------VDPEGYGEVIEEVEDESGKPPVLALLTH-VDGEYGNLPD----AGKVAKV 171 (370)
T ss_pred -----CEEEEEecCCcccCC----------cCHHHHHHHHHHhhhccCCCcEEEEEEC-CCCCCccccC----HHHHHHH
Confidence 122333322100000 3788888888642 12455666665 6889998887 8899999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccc-----
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLH----- 524 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~----- 524 (965)
|++||+++|+||+|. +|..+.. ..+..+|++ +++|++++| .|+|++++++++++.+... ..++..
T Consensus 172 a~~~~~~livDea~~-~g~~~~~----~~~~~~di~v~s~sK~~~~~-g~~G~l~~~~~~i~~l~~~--~~~~~~~~~~~ 243 (370)
T TIGR02539 172 CREKGVPLLLNCAYT-VGRMPVS----AKEIGADFIVGSGHKSMAAS-GPCGVLGMSEEWEDIVLRK--SRYSPVKEVEL 243 (370)
T ss_pred HHHcCCeEEEECccc-cCCcCCC----HHHcCCCEEEeeCcccccCC-CCEEEEEECHHHHhhhccc--ccCCccceeee
Confidence 999999999999997 4432211 112246765 689999876 4899999999999887652 111111
Q ss_pred -cCCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHcccCCCcee---eeeceeEEEEEEEeecCc--cchh
Q psy8199 525 -SHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALTSLITHPKII---NFRQKGMIWAFDVIIEDP--EQIE 597 (965)
Q Consensus 525 -~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~i~---~v~g~G~~~~i~~~~~~~--~~~~ 597 (965)
+++. ...+++++.++|+...+ -....+..++.++++++|+++ ++. ...+.+.++.+.+..... ....
T Consensus 244 ~~~~~--~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~ 317 (370)
T TIGR02539 244 LGCTS--RGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDI----GFIQLGQKPKEHDLVKFETPGFHEIAQKHK 317 (370)
T ss_pred ecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CcEEEccCCCcCceEEEECCchhHHhhhhc
Confidence 1111 12355666667764321 111223334456888888776 222 124456666665420000 0001
Q ss_pred hHHHHHHHHHHHcCcE-EeecC-CEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 598 TFSKKFFVAALKNELL-LRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 598 ~~~~~~~~~l~~~Gi~-~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
.....+.+.|.++||+ +++.. +++|++. ..+++++++++++.+.+.+
T Consensus 318 ~~~~~~~~~L~e~GI~~ir~~~~~~iRis~-~~~t~e~i~~l~~~L~~~~ 366 (370)
T TIGR02539 318 RRGYFLYEELKKRGIHGIRSGQTKYFKLSV-YGLTKEQVEYVVDSFEEIV 366 (370)
T ss_pred cccHHHHHHHHhCCCccccCCcceEEEEEe-cCCCHHHHHHHHHHHHHHH
Confidence 1134578899999997 66643 5899996 3689999999999887543
No 302
>TIGR01210 conserved hypothetical protein TIGR01210. This family of exclusively archaeal proteins has no characterized close homologs. Several rounds of PSI-BLAST with a stringent cutoff of 1e-8 shows apparent similarity of the central region of this family to the central regions of the oxygen-independent coproporphyrinogen III dehydrogenase HemN and to other enzymes.
Probab=99.75 E-value=6.6e-17 Score=174.68 Aligned_cols=206 Identities=13% Similarity=0.114 Sum_probs=154.5
Q ss_pred CCeEEEeEeEeeccCCCCC----CCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC-CCC----EE-EEeeccC-CC
Q psy8199 676 ANEIELAVLLSIKTGGCTE----DCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD-GAT----RF-CMGAAWR-EL 744 (965)
Q Consensus 676 g~~~~~~~~i~~~s~~C~~----~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~-g~~----~i-~l~~g~~-~~ 744 (965)
|......++|.. |+||++ +|.||++... . ++..++++|.+++++..+. +.+ .+ .+++|.+ +.
T Consensus 10 ~~~~~~~~~i~~-srGC~~~~~g~C~FC~~~~~---~---~r~~s~e~i~~~i~~~~~~~~~~~~~~~ikif~sgsf~D~ 82 (313)
T TIGR01210 10 GFPGKSLTIILR-TRGCYWAREGGCYMCGYLAD---S---SPEVTEENLINQFDEAIEKYKEKIKDFVIKIFTSGSFLDD 82 (313)
T ss_pred CcccceEEEEEe-CCCCCCCCCCcCccCCCCCC---C---CCCCChhHHHHHHHHHHHHhhcccccEEEEEecCCCcCCc
Confidence 333334445555 999999 5999975532 1 2236899999999887754 322 11 2344432 22
Q ss_pred CcccHHHHHHHHHHHHhcC----cEeEEecCCCCHHHHHHHHHhCCC-eEeccCCC-CHHHHh-cccCCCCHHHHHHHHH
Q psy8199 745 KDRDLDNIENMICEVKKIG----LETCLTLGMLNENQAYRLKKVGLD-YYNHNLDT-SPKLYG-DIISTRDYENRLNTLK 817 (965)
Q Consensus 745 ~~~~~~~~~~~~~~i~~~~----~~i~~~~~~~~~e~l~~Lk~aG~~-~i~i~~es-~~~~~~-~i~~~~~~~~~~~~i~ 817 (965)
...+.+.+.++++.+++.+ +.+.+++..++++.++.|+++|++ ++.+|+|| ++++++ .++++++.++..++++
T Consensus 83 ~~~~~~~~~~i~~~l~~~~~~~~i~~esrpd~i~~e~L~~l~~aG~~~~v~iG~ES~~d~~L~~~inKg~t~~~~~~ai~ 162 (313)
T TIGR01210 83 REVPKETRNYIFEKIAQRDNLKEVVVESRPEFIDEEKLEELRKIGVNVEVAVGLETANDRIREKSINKGSTFEDFIRAAE 162 (313)
T ss_pred CcCCHHHHHHHHHHHHhcCCcceEEEEeCCCcCCHHHHHHHHHcCCCEEEEEecCcCCHHHHHHhhCCCCCHHHHHHHHH
Confidence 3345677777777776643 456678899999999999999998 89999999 999995 8999999999999999
Q ss_pred HHHHcCCceeeeEEEecC-----CCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC------CCCCCHHHHHHHH
Q psy8199 818 NVRNVGINICCGGIIGLS-----ESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG------SSILDPLEFIRTI 886 (965)
Q Consensus 818 ~~~~~Gi~v~~~~i~Gl~-----et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~------~~~~~~~~~~~~i 886 (965)
.++++|+.+..++|+|++ |+.+++.++++.+..++ +.+++++++|.|||+++. ..++.....++++
T Consensus 163 ~~~~~Gi~v~~~~i~G~P~~se~ea~ed~~~ti~~~~~l~---~~vs~~~l~v~~gT~l~~~~~~G~~~pp~lws~~e~l 239 (313)
T TIGR01210 163 LARKYGAGVKAYLLFKPPFLSEKEAIADMISSIRKCIPVT---DTVSINPTNVQKGTLVEFLWNRGLYRPPWLWSVAEVL 239 (313)
T ss_pred HHHHcCCcEEEEEEecCCCCChhhhHHHHHHHHHHHHhcC---CcEEEECCEEeCCCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 999999999999999984 56677888888888885 899999999999998863 3455445555555
Q ss_pred HHHHH
Q psy8199 887 AVARI 891 (965)
Q Consensus 887 a~~R~ 891 (965)
.-.+.
T Consensus 240 ~e~~~ 244 (313)
T TIGR01210 240 KEAKK 244 (313)
T ss_pred HHHHh
Confidence 55543
No 303
>PRK08446 coproporphyrinogen III oxidase; Provisional
Probab=99.75 E-value=1.9e-17 Score=182.89 Aligned_cols=180 Identities=12% Similarity=0.154 Sum_probs=144.9
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH----CCCCEEEEeeccCCCCcccHHHHHHHHHHHHh---
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS----DGATRFCMGAAWRELKDRDLDNIENMICEVKK--- 761 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~----~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~--- 761 (965)
-..|+.+|.||.+....... .......+.++++++...+ .+++.|+|.||.. ...+.+.+.+++..+++
T Consensus 7 iPFC~~~C~yC~f~~~~~~~--~~~~~y~~~L~~Ei~~~~~~~~~~~v~~iyfGGGTP--s~l~~~~l~~ll~~i~~~~~ 82 (350)
T PRK08446 7 IPFCESKCGYCAFNSYENKH--DLKKEYMQALCLDLKFELEQFTDEKIESVFIGGGTP--STVSAKFYEPIFEIISPYLS 82 (350)
T ss_pred eCCccCcCCCCCCcCcCCCc--ccHHHHHHHHHHHHHHHHhhccCCceeEEEECCCcc--ccCCHHHHHHHHHHHHHhcC
Confidence 36799999999987642111 1111245777777765432 2678888877743 23445666666665554
Q ss_pred c--CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEEEec-CC
Q psy8199 762 I--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGIIGL-SE 836 (965)
Q Consensus 762 ~--~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl-~e 836 (965)
. .+.+.+++..++++.++.|+++|++++++|+|| +++.++.+.+.++.++..++++.++++|+. ++..+|+|+ ++
T Consensus 83 ~~~eitiE~nP~~~~~e~l~~l~~~GvnRiSiGvQS~~~~~L~~lgR~~~~~~~~~ai~~lr~~g~~~v~iDli~GlPgq 162 (350)
T PRK08446 83 KDCEITTEANPNSATKAWLKGMKNLGVNRISFGVQSFNEDKLKFLGRIHSQKQIIKAIENAKKAGFENISIDLIYDTPLD 162 (350)
T ss_pred CCceEEEEeCCCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCC
Confidence 2 344566889999999999999999999999999 999999999999999999999999999995 889999999 69
Q ss_pred CHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC
Q psy8199 837 SRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS 874 (965)
Q Consensus 837 t~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~ 874 (965)
|.+++.++++.+.+++ ++.+.++.+.|.||||+...
T Consensus 163 t~~~~~~~l~~~~~l~--~~~is~y~L~~~~gT~l~~~ 198 (350)
T PRK08446 163 NKKLLKEELKLAKELP--INHLSAYSLTIEENTPFFEK 198 (350)
T ss_pred CHHHHHHHHHHHHhcC--CCEEEeccceecCCChhHHh
Confidence 9999999999999999 99999999999999999763
No 304
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.75 E-value=1.3e-16 Score=183.92 Aligned_cols=308 Identities=16% Similarity=0.106 Sum_probs=187.0
Q ss_pred cccCCCCcHHHHHHHHHHHhhcC----CCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccc
Q psy8199 289 VMLSNLTHKPVIKLSEKLSSLTQ----YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGAL 364 (965)
Q Consensus 289 ~~~~~~~~~~~~~la~~l~~~~~----~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~ 364 (965)
|....+..+.+..+++.+.+..+ .+.++|++|+|+++++..++.+... +++.|++.+++|.++.....
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~--------pGd~Vlv~~P~Y~~~~~~~~ 153 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAE--------PGDAFLLPTPYYPGFDRDLK 153 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCC--------CCCEEEECCCCCCchHHHHh
Confidence 33334555677777777776533 3567999999999999998886643 57889999999988743222
Q ss_pred cccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCcEE-EEEEccccccCCCcccC
Q psy8199 365 AVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIA-AIIIEPLVQCAGGMIMY 440 (965)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a-aii~ep~v~~~~G~~~~ 440 (965)
...| ..++.+|.....+.. .|++++++++.+. +.++. .++++| +|++|.+.
T Consensus 154 ~~~g------------~~~v~v~~~~~~~~~----------~~~~~le~~~~~~~~~~~~~k~v~l~nP--~NPTG~~~- 208 (468)
T PLN02450 154 WRTG------------VEIVPIHCSSSNGFQ----------ITESALEEAYQQAQKLNLKVKGVLITNP--SNPLGTTT- 208 (468)
T ss_pred hcCC------------cEEEEEecCCccCCc----------CCHHHHHHHHHHHHhcCCCeeEEEEecC--CCCCCccc-
Confidence 1111 122333321111100 2457777766542 23454 455555 89999876
Q ss_pred ChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-c-cccc------C--CCccee---eeccccC-CCcccceeeeec
Q psy8199 441 DSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-A-CEHA------E--IWPDFL---CLSKGIT-GGYLPLSLVMTT 506 (965)
Q Consensus 441 ~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~-~~~~------~--~~pDiv---t~sK~l~-gG~~pig~v~~~ 506 (965)
+.+.+++|.++|++||+++|+||+|..+-..+..+ . .... + ....++ +|||.++ .| +++|+++++
T Consensus 209 s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~ 287 (468)
T PLN02450 209 TRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSN 287 (468)
T ss_pred CHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEEC
Confidence 78889999999999999999999998764444222 1 1111 1 122333 6899886 55 899999997
Q ss_pred HH-HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--c---ccHHHHHHHHHHHHHHHHHcccCCCceeeeece
Q psy8199 507 DK-IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--K---DNILQRISQDMKKITKALTSLITHPKIINFRQK 580 (965)
Q Consensus 507 ~~-i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~---~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~ 580 (965)
++ +.+.+.. .. .....+.+++.++.++|+--. + ....++++++.+.+.+.|++. ++..+.+.
T Consensus 288 ~~~l~~~~~~------~~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~----gi~~~~~~ 355 (468)
T PLN02450 288 DEMVVSAATK------MS--SFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA----GIKCLKSN 355 (468)
T ss_pred CHHHHHHHHH------Hh--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCcccCCC
Confidence 54 5555543 11 112347788888888774210 0 112344445555555555543 44445555
Q ss_pred eE-EEEEEEeecCccc-hhhHHHHHHHHHH-HcCcEEeecC-------CEEEEeCCcc-cCHHHHHHHHHhhhccc
Q psy8199 581 GM-IWAFDVIIEDPEQ-IETFSKKFFVAAL-KNELLLRPIG-------NTVYLMPPYI-LNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 581 G~-~~~i~~~~~~~~~-~~~~~~~~~~~l~-~~Gi~~~~~~-------~~lR~~p~~~-~t~~~i~~~~~~l~~~~ 645 (965)
|. |+++.+. ..... ......++...+. ++||.+.|+. +++|++ +. .+++++++.++++.+.+
T Consensus 356 ~g~flwi~l~-~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~--f~~~~~~~l~~~l~ri~~~l 428 (468)
T PLN02450 356 AGLFCWVDMR-HLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVC--FANMSEETLDLAMKRLKSFV 428 (468)
T ss_pred ceEEEEEEch-HhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEE--ecCCCHHHHHHHHHHHHHHH
Confidence 55 6666653 11000 0011224555655 5899998852 689999 56 47888999888876543
No 305
>PRK10534 L-threonine aldolase; Provisional
Probab=99.75 E-value=1.1e-16 Score=178.04 Aligned_cols=321 Identities=15% Similarity=0.112 Sum_probs=198.3
Q ss_pred cccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHH
Q psy8199 256 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSF 335 (965)
Q Consensus 256 ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~ 335 (965)
+||+.|+.+ =| .+|.+.+|+.+...... ..++.+...+|.+.+++.++ .+.+++++||++|+..++.+..
T Consensus 1 ~~~~~~~~~---~~-p~~~~~~a~~~~~~~~~----~Y~~~~~~~~L~~~la~~~g--~~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDTV---TR-PSRAMLEAMMAAPVGDD----VYGDDPTVNALQDYAAELSG--KEAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred CcccccccC---CC-CCHHHHHHHHhccCCCc----ccCCCHHHHHHHHHHHHHhC--CCeEEEeCchHHHHHHHHHHhc
Confidence 478888743 33 78999999876544431 12267888999999999984 5677899999999988887553
Q ss_pred HHHHhcCCCCceEEEEEcCCccC-CccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy8199 336 HYWYNKGFLNKKKFICLQNSYHG-ETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 414 (965)
Q Consensus 336 ~~~~~~g~~~~~~vi~~~~~yHg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 414 (965)
. ++++|++..++|.. +........+ ......++.... +. .|+++|+++
T Consensus 71 ~--------~gd~vi~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~~-----------~d~~~l~~~ 119 (333)
T PRK10534 71 E--------RGEEYIVGQAAHNYLYEAGGAAVLG-----------SIQPQPIDAAAD-GT-----------LPLDKVAAK 119 (333)
T ss_pred C--------CCCeeEEechhhhhHhcCCchHHhc-----------CceEEeecCCCC-CC-----------CCHHHHHHh
Confidence 2 45677776655531 1100000000 001122222111 11 367888888
Q ss_pred HHhCC---CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-cccccccCCCcc--eee
Q psy8199 415 LKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHAEIWPD--FLC 488 (965)
Q Consensus 415 l~~~~---~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pD--ivt 488 (965)
+.++. .++.+|+++. ++ +|.+. +.+.+++|.++|++||+++|+||+|. |+..+. ........-.+| +++
T Consensus 120 i~~~~~~~~~~~lv~l~n-p~--~G~v~-~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~~~~~~~~~~~~~s 194 (333)
T PRK10534 120 IKPDDIHFARTRLLSLEN-TH--NGKVL-PREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCELKEITQYCDSFTIC 194 (333)
T ss_pred hcccCcCcccceEEEEec-CC--CCeec-CHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCHHHHHhcCCEEEEE
Confidence 75310 1344444443 23 47766 67778999999999999999999986 432111 001111111123 457
Q ss_pred eccccCCCcccce-eeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHc
Q psy8199 489 LSKGITGGYLPLS-LVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTS 567 (965)
Q Consensus 489 ~sK~l~gG~~pig-~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~ 567 (965)
|||+++. ++| ++++++++++.+..- .. ..+..++.+.++++++.++|+.. ....++.++.++++.+.|++
T Consensus 195 ~SK~~~~---~~G~~~~~~~~~i~~~~~~---~~-~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~ 265 (333)
T PRK10534 195 LSKGLGT---PVGSLLVGNRDYIKRARRW---RK-MTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLRE 265 (333)
T ss_pred eEcCCCC---cccceEEcCHHHHHHHHHH---HH-HhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHh
Confidence 9997654 578 577899998877641 00 11222334456677777777532 23344455566788888876
Q ss_pred ccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 568 LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 568 l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+ ++...++.++|+.+.+. + .....+.+.|.++||+++++ ..+|+...+.++.++++++++++..
T Consensus 266 ~----g~~~~~~~~nfv~~~~~--~-----~~~~~~~~~l~~~gi~v~~~-~~~rl~~~~r~t~e~~~~~~~~l~~ 329 (333)
T PRK10534 266 A----GADVMRQDTNMLFVRVG--E-----EQAAALGEYMRERNVLINAS-PIVRLVTHLDVSREQLAEVVAHWRA 329 (333)
T ss_pred C----CCccCCCCceEEEEECC--c-----hhHHHHHHHHHHcCeeecCC-ceEEEEEEeCCCHHHHHHHHHHHHH
Confidence 5 34444567888777653 1 11346778899999999885 4688886666899999999999864
No 306
>PRK05628 coproporphyrinogen III oxidase; Validated
Probab=99.75 E-value=3.3e-17 Score=183.63 Aligned_cols=202 Identities=15% Similarity=0.180 Sum_probs=156.1
Q ss_pred cCCCCCCCCCCCCCCcCCCCccccc--CCCHHHHHHHHHHHHHC------CCCEEEEeeccCCCCcccHHHHHHHHHHHH
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATK--ILSIESVITAAQKAKSD------GATRFCMGAAWRELKDRDLDNIENMICEVK 760 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~--~~~~eei~~~~~~~~~~------g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~ 760 (965)
-..|+.+|.||.+............ ..-.+.+.++++...+. .++.+++.||. | ...+.+.+.++++.++
T Consensus 9 iPFC~~~C~yC~f~~~~~~~~~~~~~~~~Y~~~l~~Ei~~~~~~~~~~~~~i~~i~~GGGT-P-s~l~~~~l~~ll~~i~ 86 (375)
T PRK05628 9 VPFCATRCGYCDFNTYTAAELGGGASPDGYLDALRAELELAAAVLGDPAPPVSTVFVGGGT-P-SLLGAEGLARVLDAVR 86 (375)
T ss_pred eCCcCCcCCCCCCCcccccccccccCHHHHHHHHHHHHHHHHHhhccCCCceeEEEeCCCc-c-ccCCHHHHHHHHHHHH
Confidence 3679999999998754222110000 01156777777654432 36778886664 2 3344566666666666
Q ss_pred h-c----CcEe--EEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEE
Q psy8199 761 K-I----GLET--CLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGI 831 (965)
Q Consensus 761 ~-~----~~~i--~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i 831 (965)
+ . +.++ .+++..++++.++.|+++|++++++|+|| ++++++.+.+.++.++..++++.++++|+. ++..+|
T Consensus 87 ~~~~~~~~~e~t~e~~p~~i~~e~l~~l~~~G~~rvslGvQS~~~~~L~~l~R~~s~~~~~~a~~~l~~~g~~~v~~dli 166 (375)
T PRK05628 87 DTFGLAPGAEVTTEANPESTSPEFFAALRAAGFTRVSLGMQSAAPHVLAVLDRTHTPGRAVAAAREARAAGFEHVNLDLI 166 (375)
T ss_pred HhCCCCCCCEEEEEeCCCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4 1 2334 45889999999999999999999999999 999999999999999999999999999997 999999
Q ss_pred Eec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC------CCCCHHHHHHHHHHHHHHCC
Q psy8199 832 IGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS------SILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 832 ~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~------~~~~~~~~~~~ia~~R~~lp 894 (965)
+|+ |||.+++.++++.+.+++ ++.+.++.+.+.|||+++.. +.++.++..++...++.++.
T Consensus 167 ~GlPgqt~~~~~~tl~~~~~l~--~~~i~~y~l~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 234 (375)
T PRK05628 167 YGTPGESDDDWRASLDAALEAG--VDHVSAYALIVEDGTALARRVRRGELPAPDDDVLADRYELADARLS 234 (375)
T ss_pred ccCCCCCHHHHHHHHHHHHhcC--CCEEEeeeeecCCCChHHHHhhcCCCCCCChHHHHHHHHHHHHHHH
Confidence 999 699999999999999999 99999999999999999752 34556667777777776653
No 307
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.75 E-value=3.8e-16 Score=178.52 Aligned_cols=343 Identities=9% Similarity=-0.011 Sum_probs=200.9
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhc------cccccCCCCcHHHHHHHHHHHhhc--CCCCCeEEEcCChh
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL------EHVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGA 324 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~------~~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~~~sGs 324 (965)
|..++|+..|. ..++ .+|.+.+++.+.+... ..|....+..+.+..+++.+.+.. +...++|++|+|+.
T Consensus 33 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGD--VTQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcC--CCCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 56788887764 3344 4688899998887652 123223344556666666665443 34667999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 404 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (965)
+|+...+.+. .++++|++.+++|.++...+...+.... .. -......+..+|........
T Consensus 110 ~al~~l~~~~---------~~gd~V~v~~P~Y~~~~~~~~~~g~~~~-~~-~~~~~~~~~~v~~~~~~~~~--------- 169 (409)
T PRK07590 110 CDTGNILDIF---------GPDNTIAVTDPVYPVYVDTNVMAGRTGE-AN-EDGRYSGIVYLPCTAENNFV--------- 169 (409)
T ss_pred HHHHHHHHhc---------CCCCEEEEeCCCCcchHHHHHHcCCccc-cc-ccccccceeEeecccccCCc---------
Confidence 9988754322 3568899999999988544333332100 00 00000013333331100000
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-cccccc-CC
Q psy8199 405 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHA-EI 482 (965)
Q Consensus 405 ~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~-~~ 482 (965)
.|+ .+ ....+.++++| +|++|.+. +.+.+++|.++|++||+++|.||+|..|-..+.. .....+ +.
T Consensus 170 -~d~-------~~-~~~k~i~l~nP--~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~ 237 (409)
T PRK07590 170 -PEL-------PE-EKVDIIYLCFP--NNPTGTVL-TKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGA 237 (409)
T ss_pred -ccC-------cc-cCceEEEEeCC--CCCcCCcC-CHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCc
Confidence 011 11 12234455566 89999876 7888999999999999999999999877433321 111111 11
Q ss_pred Cccee---eeccccC-CCcccceeeeecHHHHHhhhccCCc-----ccccccCCC-CCCHHHHHHHHHHHHHHhc---cc
Q psy8199 483 WPDFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNI-----NIFLHSHSY-SGNPLACCAALATLEIFNK---DN 549 (965)
Q Consensus 483 ~pDiv---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~-----~~~~~~~t~-~~~~~~~aaa~a~L~~~~~---~~ 549 (965)
...++ +|||.++ .| +++|++++++++++.+..+... .......++ +.+.+++.++.++|+--.. ..
T Consensus 238 ~~~vi~~~SfSK~~~~pG-lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~ 316 (409)
T PRK07590 238 RECAIEFRSFSKTAGFTG-TRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKE 316 (409)
T ss_pred ccceEEEecCccccCCcC-ceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHH
Confidence 11233 6899886 45 8999999999988732100000 000112233 3577888888777742101 12
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCceeeeece-eEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------CCE
Q psy8199 550 ILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNT 620 (965)
Q Consensus 550 ~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~ 620 (965)
..+.++++.+++.+.|+.. ++....+. |+++++.+. +.. .+..+...+. +.||.+.|+ .++
T Consensus 317 ~~~~~~~~r~~l~~~L~~~----~~~~~~~~g~~f~wi~~~--~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~ 386 (409)
T PRK07590 317 LIDYYMENAKIIREGLESA----GFEVYGGVNAPYIWVKTP--DGM----SSWDFFDKLLQEANVVGTPGSGFGPSGEGY 386 (409)
T ss_pred HHHHHHHHHHHHHHHHHhc----CCceecCCcceEEEEECC--CCC----CHHHHHHHHHHHCCEEEeChhHhCCCCCCE
Confidence 3455556666666666553 34444454 556666654 211 1335666665 679999874 258
Q ss_pred EEEeCCcccCHHHHHHHHHhhhc
Q psy8199 621 VYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 621 lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+|++ +..+++++++.++++.+
T Consensus 387 iRi~--~~~~~~~l~~~l~rl~~ 407 (409)
T PRK07590 387 FRLS--AFGSRENVLEAMERIKK 407 (409)
T ss_pred EEEE--ccCCHHHHHHHHHHHHh
Confidence 9998 56788999999988764
No 308
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.75 E-value=3.5e-16 Score=177.18 Aligned_cols=329 Identities=10% Similarity=0.071 Sum_probs=202.3
Q ss_pred ccCCCCCHHHHHHHHHHHhhcccc-----ccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHh
Q psy8199 266 NLFGHSNSYINKALKNQLNKLEHV-----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYN 340 (965)
Q Consensus 266 ~~lGh~~p~v~~av~~~~~~~~~~-----~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~ 340 (965)
.-+|.-++++++|+.+........ .......+...++.+.++++++ .+.++|++||++|+..+++....
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--~~~~~~~~g~t~a~~~al~~l~~---- 100 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--MDEARVTHGAREGKFAVMHSLCK---- 100 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcC----
Confidence 346778999999999877432211 1112335567899999999995 56889999999999999987632
Q ss_pred cCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC--
Q psy8199 341 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN-- 418 (965)
Q Consensus 341 ~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-- 418 (965)
++++|++...+| .+...++...| ..+..+|.+...... .|++++++++++.
T Consensus 101 ----~gd~Vlv~~~~h-~s~~~~~~~~G------------~~~~~v~~~~~~~~~----------~d~~~l~~~l~~~~~ 153 (387)
T PRK09331 101 ----KGDYVVLDGLAH-YTSYVAAERAG------------LNVREVPKTGYPEYK----------ITPEAYAEKIEEVKE 153 (387)
T ss_pred ----CCCEEEECCCch-HHHHHHHHHcC------------CEEEEEeCccCcCCC----------cCHHHHHHHHHHhhh
Confidence 557777765544 33222222111 123344431011111 4788888888643
Q ss_pred --CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccC
Q psy8199 419 --HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGIT 494 (965)
Q Consensus 419 --~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~ 494 (965)
.+++.+|+++. +++++|.+.+ +++|.++|++||+++|+|++|+ +|..+ +....+| .|++ +++|+++
T Consensus 154 ~~~~~~~lV~l~~-~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~--~~~~~~g--~D~~~~s~~K~l~ 223 (387)
T PRK09331 154 ETGKPPALALLTH-VDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP--VDGKKLG--ADFIVGSGHKSMA 223 (387)
T ss_pred ccCCCCEEEEEEC-CCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC--CCHHHcC--CCEEEeeCccccc
Confidence 23577777777 7888998887 9999999999999999999996 44321 2222334 4655 5789998
Q ss_pred CCcccceeeeecHHHHHhhhccCCccccc------ccCCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHc
Q psy8199 495 GGYLPLSLVMTTDKIYNSIYYKNNINIFL------HSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALTS 567 (965)
Q Consensus 495 gG~~pig~v~~~~~i~~~~~~~~~~~~~~------~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~ 567 (965)
++ .++|++++++++++.+.... .++. .+++. ++...++++++|+.+.+ ....++..++.+++++.|.+
T Consensus 224 ~~-~~~G~l~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~ 298 (387)
T PRK09331 224 AS-APSGVLATTEEYADKVFRTS--RKFGVKEVELLGCTL--RGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEK 298 (387)
T ss_pred CC-CCEEEEEECHHHHhhccccc--CCCcccceeeeceec--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 76 58999999999888765421 1111 12222 23344555566655432 22345556677788888876
Q ss_pred ccCCCceeee---eceeEEEEEEEeecCc--cchhhHHHHHHHHHHHcCcEEee-cCCEEEEeCCcccCHHHHHHHHHhh
Q psy8199 568 LITHPKIINF---RQKGMIWAFDVIIEDP--EQIETFSKKFFVAALKNELLLRP-IGNTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 568 l~~~~~i~~v---~g~G~~~~i~~~~~~~--~~~~~~~~~~~~~l~~~Gi~~~~-~~~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
+ +++..+ .+...+..++...-+. ......+..+.+.|.++||...+ ....+|...+..+++++++.+++++
T Consensus 299 l---~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL 375 (387)
T PRK09331 299 I---EGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAF 375 (387)
T ss_pred C---CCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHH
Confidence 5 344322 2234444444320000 00011134588889999998543 3344444434568999999999988
Q ss_pred hccc
Q psy8199 642 FQTF 645 (965)
Q Consensus 642 ~~~~ 645 (965)
.+..
T Consensus 376 ~~i~ 379 (387)
T PRK09331 376 KEIA 379 (387)
T ss_pred HHHH
Confidence 7553
No 309
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=1.4e-16 Score=176.93 Aligned_cols=306 Identities=12% Similarity=0.171 Sum_probs=190.8
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al 331 (965)
.|...+|+..+. ++++ .+|.+.+++.+.+.... ...|+.....++.+.++++++.+.+++++++|+++++..++
T Consensus 16 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~---~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~ 89 (337)
T PRK03967 16 EGNYRIWLDKNE--NPFD-LPEELKEEIFEELKRVP---FNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLV 89 (337)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHhhcCc---cccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHH
Confidence 445668877663 3454 56889999988775421 12344444567777888877767889999999999997766
Q ss_pred HHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHH
Q psy8199 332 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 411 (965)
Q Consensus 332 ~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 411 (965)
+.. .++.|++.+++|..+.......+ ..+..++..... . .|++++
T Consensus 90 ~~~----------~gd~V~v~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~-~-----------~d~~~l 134 (337)
T PRK03967 90 KLF----------EGKHIVITPPTFGMYSFYAKLNG-------------IPVIDVPLKEDF-T-----------IDGERI 134 (337)
T ss_pred HHh----------CCCeEEEeCCChHHHHHHHHHcC-------------CeEEEeecCCCC-C-----------cCHHHH
Confidence 543 35789999999976532211111 123333332111 1 255667
Q ss_pred HHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---e
Q psy8199 412 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---C 488 (965)
Q Consensus 412 e~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t 488 (965)
++.+. ...+.+++.| +|++|.+.+ .++|.+++ ++++++|+||+|..|.. .... ......++++ +
T Consensus 135 ~~~~~---~~~~v~~~~P--~NPtG~~~~----~~~l~~i~-~~~~~ii~De~y~~~~~-~~~~--~~~~~~~~vi~l~S 201 (337)
T PRK03967 135 AEKAK---NASAVFICSP--NNPTGNLQP----EEEILKVL-ETGKPVVLDEAYAEFSG-KSLI--GLIDEYPNLILLRT 201 (337)
T ss_pred HHhcc---CCCEEEEeCC--CCCCCCCCC----HHHHHHHH-hcCCEEEEECchhhhcc-cchH--HHHhhCCCEEEEec
Confidence 66542 2224455666 999998876 45566677 47999999999987732 1111 1112234555 5
Q ss_pred eccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHH
Q psy8199 489 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALT 566 (965)
Q Consensus 489 ~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~~~~~~~l~~~L~ 566 (965)
|||.++ .| +++|++++++++++.+..- ...++.+.++++++.++|+..+. .+..+...+..+++.+.|.
T Consensus 202 ~SK~~~l~G-lRiG~iv~~~~~i~~~~~~--------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 272 (337)
T PRK03967 202 FSKAFGLAG-IRAGYAIANEEIIDALYRI--------KPPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELG 272 (337)
T ss_pred chHhhcchh-hhheeeecCHHHHHHHHhh--------cCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899887 56 8999999999999888651 13456678899999888852110 1122333444455555554
Q ss_pred cccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC----CEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 567 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG----NTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 567 ~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
+. ..++.|+++.+.+ .+.+.|.++||.+++.. +++|++ ..+.++.+++++++.
T Consensus 273 ~~-------~~~~~~~~~~~~~-------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~---~~~~~~~~~l~~~l~ 329 (337)
T PRK03967 273 EY-------AYPSDANFLLLKL-------------DAYDYLLENGIVVRKLSGRLEGHIRVT---VGKREENDEFIKALK 329 (337)
T ss_pred cC-------cCCCCCcEEEEhH-------------HHHHHHHHCCEEEEeCCCCCCCeEEEe---cCCHHHHHHHHHHHH
Confidence 32 1234455554432 15678888999997642 689999 345566667766664
Q ss_pred c
Q psy8199 643 Q 643 (965)
Q Consensus 643 ~ 643 (965)
.
T Consensus 330 ~ 330 (337)
T PRK03967 330 E 330 (337)
T ss_pred H
Confidence 3
No 310
>PRK08898 coproporphyrinogen III oxidase; Provisional
Probab=99.75 E-value=6e-17 Score=181.79 Aligned_cols=201 Identities=9% Similarity=0.108 Sum_probs=158.4
Q ss_pred cCCCCCCCCCCCCCCcCCCCccccc-CCCHHHHHHHHHHHHH----CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc-
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATK-ILSIESVITAAQKAKS----DGATRFCMGAAWRELKDRDLDNIENMICEVKKI- 762 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~-~~~~eei~~~~~~~~~----~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~- 762 (965)
-..|+.+|.||.|............ ..=.+.+.++++.... ..++.++|.||.. ...+.+.+.+++..+++.
T Consensus 26 IPFC~~~C~yC~f~~~~~~~~~~~~~~~Y~~~l~~ei~~~~~~~~~~~i~siy~GGGTP--s~L~~~~L~~ll~~i~~~~ 103 (394)
T PRK08898 26 FPWCVRKCPYCDFNSHEWKDGGAIPEAAYLDALRADLEQALPLVWGRQVHTVFIGGGTP--SLLSAAGLDRLLSDVRALL 103 (394)
T ss_pred eCCccCcCCCCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhccCCceeEEEECCCCc--CCCCHHHHHHHHHHHHHhC
Confidence 3679999999998764222110000 0124666666664432 2477888877743 445677788888777752
Q ss_pred ------CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec-
Q psy8199 763 ------GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL- 834 (965)
Q Consensus 763 ------~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl- 834 (965)
.+.+.++++.++.+.++.|+++|++++++|+|| ++++++.+.+.++.++..++++.+++.+..+++++|+|+
T Consensus 104 ~~~~~~eit~E~~p~~~~~e~L~~l~~~GvnrisiGvQS~~~~~L~~l~R~~~~~~~~~~i~~~~~~~~~v~~dlI~GlP 183 (394)
T PRK08898 104 PLDPDAEITLEANPGTFEAEKFAQFRASGVNRLSIGIQSFNDAHLKALGRIHDGAEARAAIEIAAKHFDNFNLDLMYALP 183 (394)
T ss_pred CCCCCCeEEEEECCCCCCHHHHHHHHHcCCCeEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHHhCCceEEEEEcCCC
Confidence 244566889999999999999999999999999 999999999999999999999999998888999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC--CCCHHHHHHHHHHHHHHC
Q psy8199 835 SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS--ILDPLEFIRTIAVARITM 893 (965)
Q Consensus 835 ~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~--~~~~~~~~~~ia~~R~~l 893 (965)
|+|.+++.++++.+.+++ ++.|.++.++|.|||++++.. .++.++..++...++..|
T Consensus 184 gqt~~~~~~~l~~~~~l~--p~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~L 242 (394)
T PRK08898 184 GQTLDEALADVETALAFG--PPHLSLYHLTLEPNTLFAKFPPALPDDDASADMQDWIEARL 242 (394)
T ss_pred CCCHHHHHHHHHHHHhcC--CCEEEEeeeEECCCChhhhccCCCCChHHHHHHHHHHHHHH
Confidence 799999999999999999 999999999999999998643 345566667777776666
No 311
>PRK06294 coproporphyrinogen III oxidase; Provisional
Probab=99.75 E-value=2.6e-17 Score=183.07 Aligned_cols=197 Identities=17% Similarity=0.171 Sum_probs=154.6
Q ss_pred CCCCCCCCCCCCCCcCCCC--cccccCCCHHHHHHH-HHHHHH----CCCCEEEEeeccCCCCcccHHHHHHHHHHHHh-
Q psy8199 690 GGCTEDCGYCPQSTHYNTE--ITATKILSIESVITA-AQKAKS----DGATRFCMGAAWRELKDRDLDNIENMICEVKK- 761 (965)
Q Consensus 690 ~~C~~~C~fC~~~~~~~~~--~~~~~~~~~eei~~~-~~~~~~----~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~- 761 (965)
..|+..|.||.|....... ...| .+.++++ +....+ ..++.+++.||. | ...+.+.+.++++.+++
T Consensus 14 PFC~~~C~yC~f~~~~~~~~~~~~y----~~~l~~E~~~~~~~~~~~~~i~~iy~GGGT-P-s~l~~~~l~~ll~~i~~~ 87 (370)
T PRK06294 14 PFCTKKCHYCSFYTIPYKEESVSLY----CNAVLKEGLKKLAPLRCSHFIDTVFFGGGT-P-SLVPPALIQDILKTLEAP 87 (370)
T ss_pred CCccCcCCCCcCcccCCCccCHHHH----HHHHHHHHHHHhhhhccCCceeEEEECCCc-c-ccCCHHHHHHHHHHHHhC
Confidence 6699999999987532111 0011 2333333 222221 246778886663 3 45567778888877765
Q ss_pred --cCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEEEec-CC
Q psy8199 762 --IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGIIGL-SE 836 (965)
Q Consensus 762 --~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl-~e 836 (965)
..+.+.+++..++++.++.|+++|++++++|+|| +++.++.+.+.++.++..++++.++++|+. ++..+|+|+ |+
T Consensus 88 ~~~eit~E~~P~~~~~~~l~~l~~~G~nrislGvQS~~~~~L~~l~R~~~~~~~~~ai~~~~~~g~~~v~~Dli~GlPgq 167 (370)
T PRK06294 88 HATEITLEANPENLSESYIRALALTGINRISIGVQTFDDPLLKLLGRTHSSSKAIDAVQECSEHGFSNLSIDLIYGLPTQ 167 (370)
T ss_pred CCCeEEEEeCCCCCCHHHHHHHHHCCCCEEEEccccCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCCC
Confidence 2456677899999999999999999999999999 999999999999999999999999999995 899999999 69
Q ss_pred CHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC------CCCCHHHHHHHHHHHHHHCC
Q psy8199 837 SRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS------SILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 837 t~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~------~~~~~~~~~~~ia~~R~~lp 894 (965)
|.+++.++++.+.+++ ++.++++.++|.|||+++.. ..++.++..++...++..|.
T Consensus 168 t~~~~~~~l~~~~~l~--~~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 229 (370)
T PRK06294 168 SLSDFIVDLHQAITLP--ITHISLYNLTIDPHTSFYKHRKRLLPSIADEEILAEMSLAAEELLT 229 (370)
T ss_pred CHHHHHHHHHHHHccC--CCeEEEeeeEecCCChHHHHHhcCCCCCcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999998752 23566777777777776654
No 312
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.74 E-value=8.8e-16 Score=174.59 Aligned_cols=333 Identities=15% Similarity=0.086 Sum_probs=206.6
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhc----cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChhHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL----EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASA 326 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~----~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA 326 (965)
+...+|+..|.+. + ..++.+.+++.+.+... ..+....+..+.+..+++.+....+ .+.+++++++|+++|
T Consensus 32 ~~~~~~l~~g~p~--~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~a 108 (394)
T PRK06836 32 ADNVFDFSLGNPS--V-PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGA 108 (394)
T ss_pred CCCeEEecCcCCC--C-CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHH
Confidence 3467888776432 2 24678888888766532 2222233444555666666665432 356789999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..+++.... +++.|++.+++|.++...... ....+..+|.....+. .
T Consensus 109 l~~~~~~l~~--------~gd~Vli~~p~~~~~~~~~~~-------------~g~~v~~v~~~~~~~~-----------~ 156 (394)
T PRK06836 109 LNVALKAILN--------PGDEVIVFAPYFVEYRFYVDN-------------HGGKLVVVPTDTDTFQ-----------P 156 (394)
T ss_pred HHHHHHHhcC--------CCCEEEEcCCCCccHHHHHHH-------------cCCEEEEEecCCccCc-----------C
Confidence 9998886632 567899999998876322211 1123344443221111 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHh------cCCeEEEeccccCCCccccccccccc
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN------YNIHLIADEIAVGCGRTGKFFACEHA 480 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~------~g~llI~DEv~tg~gr~G~~~~~~~~ 480 (965)
|++++++++.. ++.+|++.. ++|++|.+. +.+.+++|.++|++ ||+++|.||+|..|-..|.... ...
T Consensus 157 d~~~l~~~~~~---~~~~v~~~~-p~NPtG~~~-~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~-~~~ 230 (394)
T PRK06836 157 DLDALEAAITP---KTKAVIINS-PNNPTGVVY-SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP-YIF 230 (394)
T ss_pred CHHHHHhhcCc---CceEEEEeC-CCCCCCcCC-CHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC-ChH
Confidence 67888888852 455566655 589999876 67779999999999 8999999999987743332111 011
Q ss_pred CCCccee---eeccccC-CCcccceeeeecHHHHHh--hhccCCccccc-ccCCCCCCHHHHHHHHHHHHHHhcccHHHH
Q psy8199 481 EIWPDFL---CLSKGIT-GGYLPLSLVMTTDKIYNS--IYYKNNINIFL-HSHSYSGNPLACCAALATLEIFNKDNILQR 553 (965)
Q Consensus 481 ~~~pDiv---t~sK~l~-gG~~pig~v~~~~~i~~~--~~~~~~~~~~~-~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~ 553 (965)
...++++ +|||.++ .| +++|++++++++.+. +... ..... ..+..+.+++++.++...++ +....+.
T Consensus 231 ~~~~~~i~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~ 304 (394)
T PRK06836 231 KYYDNSIVVYSFSKSLSLPG-ERIGYIAVNPEMEDADDLVAA--LVFANRILGFVNAPALMQRVVAKCLD---ATVDVSI 304 (394)
T ss_pred HccCcEEEEecchhhccCcc-eeeEEEecCHHHhhhHHHHHH--HHHHhhccccccCCHHHHHHHHHHhC---ChHHHHH
Confidence 1123344 5899997 45 899999998876432 1110 00000 01123456777777766663 2223445
Q ss_pred HHHHHHHHHHHHHcccCCCceeeeeceeE-EEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----CCEEEEeCCc
Q psy8199 554 ISQDMKKITKALTSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPY 627 (965)
Q Consensus 554 ~~~~~~~l~~~L~~l~~~~~i~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~lR~~p~~ 627 (965)
.+++.+.+.+.|++. ++....+.|. ++++.+. .. ...++.+.|.++||.+.|+ ++++||+.
T Consensus 305 ~~~~r~~l~~~L~~~----g~~~~~~~gg~~~~~~~~--~~-----~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~-- 371 (394)
T PRK06836 305 YKRNRDLLYDGLTEL----GFECVKPQGAFYLFPKSP--EE-----DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSY-- 371 (394)
T ss_pred HHHHHHHHHHHHHhC----CCEeecCCceEEEEEeCC--CC-----CHHHHHHHHHhCCEEEECchhcCCCCeEEEEe--
Confidence 666667777777653 3444445554 4444442 11 1345667888999999986 36899995
Q ss_pred ccCHHHHHHHHHhhhccc
Q psy8199 628 ILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 628 ~~t~~~i~~~~~~l~~~~ 645 (965)
..+++++.+.++++.+.+
T Consensus 372 ~~~~~~~~~~i~~l~~~l 389 (394)
T PRK06836 372 CVDTETIERSLPAFEKLA 389 (394)
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 468899999988887554
No 313
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=1.4e-16 Score=178.89 Aligned_cols=284 Identities=10% Similarity=0.097 Sum_probs=183.8
Q ss_pred HHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcc
Q psy8199 299 VIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTS 378 (965)
Q Consensus 299 ~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~ 378 (965)
..+|.+.+++.++.+.++|++++|+++++..++..... ++++.|++.+++|..+...+...
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~-------~g~~~vlv~~p~y~~~~~~~~~~------------ 121 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV-------PGRDAVLVTPPVFGMYAVCARLQ------------ 121 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC-------CCCCeEEEcCCChHHHHHHHHHc------------
Confidence 46777778887776778999999999999999886633 23367888888775442221111
Q ss_pred cCCCeeEecCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC
Q psy8199 379 LLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI 457 (965)
Q Consensus 379 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~ 457 (965)
...+..+|... ..+.. .|++++++.+.. .++.+|++.. ++|++|.+. +.+.++++.+.|+ +++
T Consensus 122 -g~~~~~v~~~~~~~~~~----------~d~~~l~~~~~~--~~~~lv~l~~-p~NPTG~~~-~~~~~~~l~~~~~-~~~ 185 (364)
T PRK04781 122 -NAPLVEVPLVDGADGFH----------ADVPAIVAAALA--SNAKLVFLCS-PSNPAGSAI-ALDQIERALQALQ-GKA 185 (364)
T ss_pred -CCEEEEEecCCCccCCC----------cCHHHHHHHHhc--cCCeEEEEcC-CCCCCCCCc-CHHHHHHHHHhCC-CCc
Confidence 11233444311 00100 245666444322 2344444444 499999887 5666777777775 479
Q ss_pred eEEEeccccCCCcccccccccccCCCccee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHH
Q psy8199 458 HLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPL 533 (965)
Q Consensus 458 llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~ 533 (965)
++|+||+|..|.... ......+..++++ +|||.++ .| +++|++++++++++.+.. ....++.+.+
T Consensus 186 ~iI~Deay~~f~~~~--~~~~~~~~~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~--------~~~~~~~~~~ 254 (364)
T PRK04781 186 LVVVDEAYGEFSDVP--SAVGLLARYDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRR--------CQAPYPVPTP 254 (364)
T ss_pred EEEEeCcchhhcCCc--chHHHHhhCCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHh--------ccCCCCCCHH
Confidence 999999998874211 1112223335555 6899887 45 899999999999998875 2245677888
Q ss_pred HHHHHHHHHHHHh---cccHHHHHHHHHHHHHHHHHcccCCCcee-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHH
Q psy8199 534 ACCAALATLEIFN---KDNILQRISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK 609 (965)
Q Consensus 534 ~~aaa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~ 609 (965)
++.++.++|+.-. -.+..+.++++.+++.+.|+.+ +++. ..++.|+++.+.+. + ...+.+.|.+
T Consensus 255 ~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~--~-------~~~~~~~l~~ 322 (364)
T PRK04781 255 CAALAEQALSAPALAVTARRVAEVRAERERLHAALAQL---PGVRRVYPSQGNFLLVRFD--D-------AEAAFQALLA 322 (364)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCeECCCCCcEEEEEcC--C-------HHHHHHHHHH
Confidence 8888888775311 0122344555666677766554 4442 45567888877663 2 2457788899
Q ss_pred cCcEEeec------CCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 610 NELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 610 ~Gi~~~~~------~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+||.++++ ++++|++ ..+.++.+.+++++..
T Consensus 323 ~gI~v~~~~~~~~~~~~~Ris---~~~~~~~~~l~~al~~ 359 (364)
T PRK04781 323 AGVVVRDQRAAPRLSDALRIT---LGTPEQNDRVLAALQR 359 (364)
T ss_pred CCeEEeeCCCCCCCCCeEEEe---CCCHHHHHHHHHHHHH
Confidence 99999874 2689999 4577888888888764
No 314
>PRK06582 coproporphyrinogen III oxidase; Provisional
Probab=99.74 E-value=3.8e-17 Score=182.10 Aligned_cols=201 Identities=13% Similarity=0.146 Sum_probs=159.3
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH----CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS----DGATRFCMGAAWRELKDRDLDNIENMICEVKKI-- 762 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~----~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~-- 762 (965)
-..|..+|.||.|.+....... .. .=.+.+.++++...+ ..++.++|.||. | ...+.+.+.++++.+++.
T Consensus 18 iPFC~~~C~yC~f~~~~~~~~~-~~-~Y~~aL~~Ei~~~~~~~~~~~i~tiy~GGGT-P-s~l~~~~l~~ll~~i~~~~~ 93 (390)
T PRK06582 18 WPFCLSKCPYCDFNSHVASTID-HN-QWLKSYEKEIEYFKDIIQNKYIKSIFFGGGT-P-SLMNPVIVEGIINKISNLAI 93 (390)
T ss_pred eCCCcCcCCCCCCeeccCCCCC-HH-HHHHHHHHHHHHHHHHccCCceeEEEECCCc-c-ccCCHHHHHHHHHHHHHhCC
Confidence 3679999999998764221110 00 012344445443332 347788887774 3 345567777777777652
Q ss_pred -----CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec-C
Q psy8199 763 -----GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-S 835 (965)
Q Consensus 763 -----~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl-~ 835 (965)
.+.+.+++..++.+.++.|+++|++++++|+|| +++.++.+.+.|+.++.+++++.+++++..++..+|+|+ |
T Consensus 94 ~~~~~eitiE~nP~~~~~e~l~~l~~~GvnRiSiGvQS~~d~~L~~lgR~h~~~~~~~ai~~~~~~~~~v~~DlI~GlPg 173 (390)
T PRK06582 94 IDNQTEITLETNPTSFETEKFKAFKLAGINRVSIGVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFPRVSFDLIYARSG 173 (390)
T ss_pred CCCCCEEEEEeCCCcCCHHHHHHHHHCCCCEEEEECCcCCHHHHHHcCCCCCHHHHHHHHHHHHHhCCcEEEEeecCCCC
Confidence 345666889999999999999999999999999 999999999999999999999999999789999999999 6
Q ss_pred CCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC------CCCCCHHHHHHHHHHHHHHCCC
Q psy8199 836 ESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG------SSILDPLEFIRTIAVARITMPT 895 (965)
Q Consensus 836 et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~------~~~~~~~~~~~~ia~~R~~lp~ 895 (965)
+|.+++.++++.+.+++ ++.|+++.+.+.|||++++ ...++.++..++...++..|..
T Consensus 174 qt~e~~~~~l~~~~~l~--p~his~y~L~i~~gT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~ 237 (390)
T PRK06582 174 QTLKDWQEELKQAMQLA--TSHISLYQLTIEKGTPFYKLFKEGNLILPHSDAAAEMYEWTNHYLES 237 (390)
T ss_pred CCHHHHHHHHHHHHhcC--CCEEEEecCEEccCChHHHHHhcCCCCCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999974 2456778888888888887743
No 315
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.74 E-value=4.4e-16 Score=178.04 Aligned_cols=304 Identities=14% Similarity=0.153 Sum_probs=186.7
Q ss_pred CCCCcHHHHHHHHHHHhhcC----CCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCcccccccc
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQ----YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 367 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~----~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~ 367 (965)
..+..+.+..+|+.+.+.++ ...+++++|+|+++|++.++.+... +++.|++..|.|.++........
T Consensus 94 ~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~--------pGD~Vlv~~P~Y~~f~~~~~~~~ 165 (447)
T PLN02607 94 YHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILAD--------PGDALLVPTPYYPGFDRDLRWRT 165 (447)
T ss_pred CcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCC--------CCCEEEEcCCCCcchHHHHHhcC
Confidence 34556677788888876543 4567999999999999998776543 67889999999988743221111
Q ss_pred CCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCcEE-EEEEccccccCCCcccCChH
Q psy8199 368 NIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIA-AIIIEPLVQCAGGMIMYDSI 443 (965)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a-aii~ep~v~~~~G~~~~~~~ 443 (965)
+ ..++.++...... + ..|++++++++.+. +.++. .++++| +|++|.+. +++
T Consensus 166 g------------~~vv~v~~~~~~~---------f-~~~~~~le~a~~~a~~~~~~vk~lll~nP--~NPtG~~~-s~e 220 (447)
T PLN02607 166 G------------VKIVPIHCDSSNN---------F-QVTPQALEAAYQEAEAANIRVRGVLITNP--SNPLGATV-QRS 220 (447)
T ss_pred C------------cEEEEEeCCCCCC---------C-cCCHHHHHHHHHHHHHhCCCeeEEEEeCC--CCCcCccc-CHH
Confidence 1 1122222211100 1 02667787777542 33455 445555 89999765 788
Q ss_pred HHHHHHHHHHhcCCeEEEeccccCCCccccccc-c-c---ccC---CCccee---eeccccC-CCcccceeeee-cHHHH
Q psy8199 444 YLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-C-E---HAE---IWPDFL---CLSKGIT-GGYLPLSLVMT-TDKIY 510 (965)
Q Consensus 444 ~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~-~---~~~---~~pDiv---t~sK~l~-gG~~pig~v~~-~~~i~ 510 (965)
.+++|.++|++|++.+|+||+|..+-..+..|. . + ..+ ....++ +|||.++ .| +++|++++ ++++.
T Consensus 221 ~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G-lRvG~ivs~n~~l~ 299 (447)
T PLN02607 221 VLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVV 299 (447)
T ss_pred HHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc-ceEEEEEEcCHHHH
Confidence 899999999999999999999987422222121 1 1 111 112233 5899887 45 89999998 66776
Q ss_pred HhhhccCCcccccccCCC-CCCHHHHHHHHHHHHHHhcccHH--------HHHHHHHHHHHHHHHcccCCCceeeeece-
Q psy8199 511 NSIYYKNNINIFLHSHSY-SGNPLACCAALATLEIFNKDNIL--------QRISQDMKKITKALTSLITHPKIINFRQK- 580 (965)
Q Consensus 511 ~~~~~~~~~~~~~~~~t~-~~~~~~~aaa~a~L~~~~~~~~~--------~~~~~~~~~l~~~L~~l~~~~~i~~v~g~- 580 (965)
+.+.. . ..| ..+.+++.++.+.|+ ++++. +++++..+.+.+.|++. ++..+++.
T Consensus 300 ~~~~~------~---~~~~~~s~~~q~~~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~----gi~~~~~~a 363 (447)
T PLN02607 300 TTARR------M---SSFTLVSSQTQHLLASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLRRA----GIECLKGNA 363 (447)
T ss_pred HHHHH------H---hhcCCCCHHHHHHHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCcccCCe
Confidence 66654 1 122 346677777666663 33332 22333344444445432 44545554
Q ss_pred eEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeecC-------CEEEEeCCcc-cCHHHHHHHHHhhhccccc
Q psy8199 581 GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPIG-------NTVYLMPPYI-LNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 581 G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~-------~~lR~~p~~~-~t~~~i~~~~~~l~~~~~~ 647 (965)
|+|+++++...-.........++++++. +.||.+.|+. +++|++ +. .+++.+++.++++...+..
T Consensus 364 g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~--fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 364 GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVC--FANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEE--eccCCHHHHHHHHHHHHHHHHH
Confidence 6777777641000010111235666665 5799998742 699999 66 4789999999998776543
No 316
>PRK08208 coproporphyrinogen III oxidase; Validated
Probab=99.74 E-value=9.4e-17 Score=182.37 Aligned_cols=210 Identities=13% Similarity=0.149 Sum_probs=163.2
Q ss_pred CCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC----CCCEEEEeeccCCCCcccHHH
Q psy8199 676 ANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD----GATRFCMGAAWRELKDRDLDN 751 (965)
Q Consensus 676 g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~----g~~~i~l~~g~~~~~~~~~~~ 751 (965)
+..+.++..| ..|+.+|.||.+....... ........+.++++++...+. .+..+.+.||. | ...+.+.
T Consensus 37 ~~~~~lYvHI----PFC~~~C~yC~~~~~~~~~-~~~~~~y~~~L~~Ei~~~~~~~~~~~i~~i~~GGGT-P-s~l~~~~ 109 (430)
T PRK08208 37 EDALSLYIHI----PFCEMRCGFCNLFTRTGAD-AEFIDSYLDALIRQAEQVAEALAPARFASFAVGGGT-P-TLLNAAE 109 (430)
T ss_pred CCceEEEEEe----CCccCcCCCCCCccccCCc-cchHHHHHHHHHHHHHHHHHHcCCCceeEEEEcCCc-c-ccCCHHH
Confidence 4444444444 5699999999986542211 011112357777777655432 36677775553 3 3345566
Q ss_pred HHHHHHHHHh---c---C--cEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHc
Q psy8199 752 IENMICEVKK---I---G--LETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNV 822 (965)
Q Consensus 752 ~~~~~~~i~~---~---~--~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~ 822 (965)
+.++++.+++ . + +.+.+++..++++.++.|+++|++++++|+|| +++.++.+.+.++.++..++++.++++
T Consensus 110 l~~Ll~~i~~~~~~~~~~~eitiE~~P~~lt~e~l~~l~~~G~~rvslGvQS~~~~~L~~l~R~~~~~~~~~ai~~l~~~ 189 (430)
T PRK08208 110 LEKLFDSVERVLGVDLGNIPKSVETSPATTTAEKLALLAARGVNRLSIGVQSFHDSELHALHRPQKRADVHQALEWIRAA 189 (430)
T ss_pred HHHHHHHHHHhCCCCCCCceEEEEeCcCcCCHHHHHHHHHcCCCEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHHc
Confidence 6666666654 1 2 23456788899999999999999999999999 899999999999999999999999999
Q ss_pred CCc-eeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q psy8199 823 GIN-ICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 823 Gi~-v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp 894 (965)
|+. ++..+|+|+ ++|.+++.++++.+.+++ ++.+.++++++.|||++......+.++..++...++..|.
T Consensus 190 g~~~i~~dlI~GlP~qt~e~~~~~l~~~~~l~--~~~is~y~L~~~~~T~l~~~~~~~~~~~~~m~~~~~~~L~ 261 (430)
T PRK08208 190 GFPILNIDLIYGIPGQTHASWMESLDQALVYR--PEELFLYPLYVRPLTGLGRRARAWDDQRLSLYRLARDLLL 261 (430)
T ss_pred CCCeEEEEeecCCCCCCHHHHHHHHHHHHhCC--CCEEEEccccccCCCccchhcCCCHHHHHHHHHHHHHHHH
Confidence 997 579999999 699999999999999999 9999999999999999998766677888888888888774
No 317
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.74 E-value=5.3e-16 Score=179.36 Aligned_cols=303 Identities=15% Similarity=0.132 Sum_probs=186.5
Q ss_pred CCCCcHHHHHHHHHHHhhcC----CCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCcccccccc
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQ----YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 367 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~----~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~ 367 (965)
..+..+.+..+++.+.+..+ .++++|++|+|+++|++.++.+... +++.|++.+++|.++........
T Consensus 93 ~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~--------pGD~Vlv~~P~Y~~~~~~~~~~~ 164 (496)
T PLN02376 93 YHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLAD--------PGDVFLIPSPYYAAFDRDLRWRT 164 (496)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCC--------CCCEEEECCCCccchHHHHHhhC
Confidence 33456677778887776543 4678999999999999999987743 56889999999998843221111
Q ss_pred CCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHh---CCCcEE-EEEEccccccCCCcccCChH
Q psy8199 368 NIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKK---NHNKIA-AIIIEPLVQCAGGMIMYDSI 443 (965)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a-aii~ep~v~~~~G~~~~~~~ 443 (965)
| ..++.+|........ .|+++++++++. .+.++. .++++| +|++|.+. +.+
T Consensus 165 G------------~~vv~v~~~~~~~~~----------~~~~~le~a~~~a~~~~~~~k~l~l~nP--~NPTG~~~-s~e 219 (496)
T PLN02376 165 G------------VEIIPVPCSSSDNFK----------LTVDAADWAYKKAQESNKKVKGLILTNP--SNPLGTML-DKD 219 (496)
T ss_pred C------------CEEEEEeCCCCccCc----------CCHHHHHHHHHHHHhcCCCeeEEEEcCC--CCCCCccC-CHH
Confidence 1 123333332110000 256666655432 123455 444555 99999876 778
Q ss_pred HHHHHHHHHHhcCCeEEEeccccCCCcccccc-cc-cc---cC---CCcce----eeeccccC-CCcccceeeeec-HHH
Q psy8199 444 YLKLVREICNNYNIHLIADEIAVGCGRTGKFF-AC-EH---AE---IWPDF----LCLSKGIT-GGYLPLSLVMTT-DKI 509 (965)
Q Consensus 444 ~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~-~~---~~---~~pDi----vt~sK~l~-gG~~pig~v~~~-~~i 509 (965)
.+++|.++|++||+++|+||+|..+...+..+ +. +. ++ ..++. -+|||.++ .| +++|+++++ +.+
T Consensus 220 ~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG-lRvG~li~~~~~l 298 (496)
T PLN02376 220 TLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG-FRVGIVYSFNDSV 298 (496)
T ss_pred HHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCc-ceEEEEEECCHHH
Confidence 89999999999999999999999864444322 11 11 11 12342 26899886 45 899999984 556
Q ss_pred HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccH--------HHHHHHHHHHHHHHHHcccCCCceeeeecee
Q psy8199 510 YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI--------LQRISQDMKKITKALTSLITHPKIINFRQKG 581 (965)
Q Consensus 510 ~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~--------~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G 581 (965)
.+.+.. . ......+.+++.++.+.|+ +..+ .++++++.+.+.+.|++. ++..+.+.|
T Consensus 299 ~~~~~~-------~-~~~~~vs~~~Q~a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~----gi~~~~~~a 363 (496)
T PLN02376 299 VSCARK-------M-SSFGLVSSQTQLMLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIKKA----DIACLTSNA 363 (496)
T ss_pred HHHHHH-------H-hhcCCCCHHHHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCcccCCCc
Confidence 555433 1 1112356778887777763 3222 233344444455555442 444455554
Q ss_pred -EEEEEEEeecCcc--chhhHHHHHHHHHHH-cCcEEeec-------CCEEEEeCCcc-cCHHHHHHHHHhhhcccc
Q psy8199 582 -MIWAFDVIIEDPE--QIETFSKKFFVAALK-NELLLRPI-------GNTVYLMPPYI-LNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 582 -~~~~i~~~~~~~~--~~~~~~~~~~~~l~~-~Gi~~~~~-------~~~lR~~p~~~-~t~~~i~~~~~~l~~~~~ 646 (965)
+++++++. .... .......++++.+.+ .||.+.|+ .+++|++ +. .+++.+++.++++.+.+.
T Consensus 364 G~flwi~l~-~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~--fa~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 364 GLFAWMDLR-HLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRIC--FANMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred eEEEEEEch-hhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEE--eeCCCHHHHHHHHHHHHHHHH
Confidence 77777764 1100 001112356677765 59999884 2689999 55 577888888888876543
No 318
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.73 E-value=1.2e-15 Score=174.17 Aligned_cols=333 Identities=12% Similarity=0.115 Sum_probs=197.0
Q ss_pred HHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEc
Q psy8199 274 YINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQ 353 (965)
Q Consensus 274 ~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~ 353 (965)
.+.+++.+++..... ....++...+|.+.++++++ .+++++++||++|+..++.+..+ +++ |+..+
T Consensus 58 a~~~a~~~a~~~g~~---~Y~~~~g~~~Lreaia~~~~--~~~vv~t~ggt~A~~~~~~all~--------pGD-Vii~~ 123 (460)
T PRK13238 58 AMSDRQWAAMMRGDE---AYAGSRSYYRLEDAVKDIFG--YPYTIPTHQGRAAEQILFPVLIK--------KGD-VVPSN 123 (460)
T ss_pred hhhHHHHHHHHhCCc---ccCCCCCHHHHHHHHHHHhC--CCcEEECCCHHHHHHHHHHHhCC--------CCC-EEccC
Confidence 477777777755321 12334556788888888884 57899999999999999876633 445 88888
Q ss_pred CCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH-HHHHHHHHHHHHhCC-CcEEEEEEcccc
Q psy8199 354 NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA-RCAIFDLEILLKKNH-NKIAAIIIEPLV 431 (965)
Q Consensus 354 ~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~-~~~aaii~ep~v 431 (965)
+.|..+.......++ ..+.++...... + ...+.+. ..|+++|++++.+.+ +++++|+++. +
T Consensus 124 p~~~~~~~~i~~~G~-------------~~v~v~~~~~~~-~--~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~-p 186 (460)
T PRK13238 124 YHFDTTRAHIELNGA-------------TAVDLVIDEALD-T--GSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTI-T 186 (460)
T ss_pred CcccchHHHHHHcCC-------------EEEEEecccccc-c--cccccccCCcCHHHHHHHHhhcCCCceeEEEEec-C
Confidence 877665333322222 122333221000 0 0000111 147899999997543 4688888887 7
Q ss_pred ccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccC----CCcc---cccc-ccc-c---cCCCcceeeeccccCCCccc
Q psy8199 432 QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG----CGRT---GKFF-ACE-H---AEIWPDFLCLSKGITGGYLP 499 (965)
Q Consensus 432 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg----~gr~---G~~~-~~~-~---~~~~pDivt~sK~l~gG~~p 499 (965)
+|++|..+.+.+.+++|+++|++||+++|+|+++.. |+.. |... ... . .+--.|.+++| +.-.|+.|
T Consensus 187 ~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~S-g~K~g~~~ 265 (460)
T PRK13238 187 NNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMS-AKKDAMVN 265 (460)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEe-cccCCCCc
Confidence 888876667899999999999999999999997742 1100 0000 000 0 01125777776 22112235
Q ss_pred ceeeee-c-HHHHHhhhccCCccccccc-CCCCCCHHHHHHHHH-HHHHHhcccHHHHHHHHHHHHHHHHHcccCCCcee
Q psy8199 500 LSLVMT-T-DKIYNSIYYKNNINIFLHS-HSYSGNPLACCAALA-TLEIFNKDNILQRISQDMKKITKALTSLITHPKII 575 (965)
Q Consensus 500 ig~v~~-~-~~i~~~~~~~~~~~~~~~~-~t~~~~~~~~aaa~a-~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~ 575 (965)
.|.+++ + +++++.+.. ...+.++ .||++++..+.+|++ +|+...+++..+...++.++|.+.|++. ++.
T Consensus 266 ~GG~i~~~d~~l~~~~~~---~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~----G~~ 338 (460)
T PRK13238 266 IGGLLCFRDEDLFTECRT---LCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA----GVP 338 (460)
T ss_pred ceeEEEcChHHHHHHhhh---cccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC----CCC
Confidence 555444 5 577776654 1112233 388887777444444 5654334455555555678899888774 455
Q ss_pred eeeceeEEEEEEEeecC-cc-chhhH-HHHHHHH-HHHcCcEEeecC------------------CEEEEeCCc-ccCHH
Q psy8199 576 NFRQKGMIWAFDVIIED-PE-QIETF-SKKFFVA-ALKNELLLRPIG------------------NTVYLMPPY-ILNKN 632 (965)
Q Consensus 576 ~v~g~G~~~~i~~~~~~-~~-~~~~~-~~~~~~~-l~~~Gi~~~~~~------------------~~lR~~p~~-~~t~~ 632 (965)
.+.+.|.++.+.-...- +. +...+ ...++.. +.+.||.+.|.+ +.+||..|. ..+.+
T Consensus 339 ~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~ 418 (460)
T PRK13238 339 IQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQS 418 (460)
T ss_pred eEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHH
Confidence 55566655543322110 00 00111 2345444 458899886522 579999775 45888
Q ss_pred HHHHHHHhhhccc
Q psy8199 633 EIQHMTSAIFQTF 645 (965)
Q Consensus 633 ~i~~~~~~l~~~~ 645 (965)
+++.+.+++....
T Consensus 419 ~~~~~~~~l~~~~ 431 (460)
T PRK13238 419 HMDYVAEALKAVK 431 (460)
T ss_pred HHHHHHHHHHHHH
Confidence 9998888877654
No 319
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=1.4e-16 Score=178.58 Aligned_cols=283 Identities=12% Similarity=0.132 Sum_probs=181.9
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCcc
Q psy8199 294 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 373 (965)
Q Consensus 294 ~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~ 373 (965)
|+.....+|.+.+++.++...++|++++|+++++..++++... ++++.|++.+++|..+...+...+
T Consensus 57 Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~-------~g~d~vlv~~P~y~~y~~~~~~~g------ 123 (354)
T PRK04635 57 YPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCE-------PGQDSIACFGPTYGMYAISAETFN------ 123 (354)
T ss_pred CCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcC-------CCCCeEEEcCCChHHHHHHHHHcC------
Confidence 3333456788888888887888999999999999999886643 344789999999977643222211
Q ss_pred chhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy8199 374 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 453 (965)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~ 453 (965)
..+..+|...... .|++.+++ + ......++++| +|++|.+.+ .+.+++|.+.|+
T Consensus 124 -------~~v~~v~~~~~~~------------~~~~~l~~-~---~~~~li~i~nP--~NPTG~~~~-~~~l~~l~~~~~ 177 (354)
T PRK04635 124 -------VGVKALPLTADYQ------------LPLDYIEQ-L---DGAKLVFICNP--NNPTGTVID-RADIEQLIEMTP 177 (354)
T ss_pred -------CEEEEEecCCCCC------------CCHHHHHh-c---cCCCEEEEeCC--CCCCCccCC-HHHHHHHHHhCC
Confidence 1334444322111 14455542 2 12223445555 999998874 555666666655
Q ss_pred hcCCeEEEeccccCCCcccccccccccCCCccee---eeccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCC
Q psy8199 454 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 529 (965)
Q Consensus 454 ~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~ 529 (965)
++++|+||+|..|... . .........++++ +|||.++ .| +++|++++++++++.+.. ....++
T Consensus 178 --~~~vivDeay~~~~~~-~-s~~~~~~~~~~~iv~~S~SK~~~l~G-lRlG~~i~~~~~~~~l~~--------~~~~~~ 244 (354)
T PRK04635 178 --DAIVVVDEAYIEFCPE-Y-SVADLLASYPNLVVLRTLSKAFALAG-ARCGFTLANEELIEILMR--------VIAPYP 244 (354)
T ss_pred --CcEEEEeCchHhhccC-c-chHHHHhhCCCEEEEechHHHhhhhH-HHHhhhhCCHHHHHHHHh--------hcCCCC
Confidence 5999999999877421 1 1111112234544 6899876 45 899999999999988764 112455
Q ss_pred CCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHH
Q psy8199 530 GNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVA 606 (965)
Q Consensus 530 ~~~~~~aaa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~ 606 (965)
.+.+++.++.++|+.... ....+.++++++++.+.|+++ +++...++.|.|+.+.+. + ...+.+.
T Consensus 245 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~~~g~f~~~~~~--~-------~~~~~~~ 312 (354)
T PRK04635 245 VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY---GGAKVLEGNGNYVLAKFD--D-------VDAVFKA 312 (354)
T ss_pred CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC---CCceECCCCCcEEEEECC--C-------HHHHHHH
Confidence 677777777777742111 112344555566666766654 434445667887776653 2 2356778
Q ss_pred HHHcCcEEeec-----CCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 607 ALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 607 l~~~Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
|.++||.++.. ++++|++ ..+.++++.+++++++
T Consensus 313 l~~~gv~v~~~~~~~~~~~lRis---~~~~e~~~~l~~al~~ 351 (354)
T PRK04635 313 LWDAGIVARAYKDPRLANCIRFS---FSNRAETDKLIGLIRN 351 (354)
T ss_pred HHHCCEEEEECCCCCCCCeEEEE---eCCHHHHHHHHHHHHH
Confidence 88999999754 2689999 4578999999988754
No 320
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.73 E-value=6.8e-17 Score=177.14 Aligned_cols=191 Identities=13% Similarity=0.215 Sum_probs=154.6
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCccc----HHHHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRD----LDNIENMIC 757 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~----~~~~~~~~~ 757 (965)
.+.+.+ +.||+++|+||..+.. ++ +.+.+++++|+++++.+.+.|+++|.|+|.+..-...+ ...+.++++
T Consensus 145 ~A~v~I-~eGCn~~CtfCiiP~~--RG--~~rSr~~e~Il~ev~~Lv~~G~kEI~L~gqdv~aYG~D~~~~~~~l~~Ll~ 219 (437)
T COG0621 145 RAFVKI-QEGCNKFCTFCIIPYA--RG--KERSRPPEDILKEVKRLVAQGVKEIVLTGQDVNAYGKDLGGGKPNLADLLR 219 (437)
T ss_pred EEEEEh-hcCcCCCCCeeeeecc--CC--CccCCCHHHHHHHHHHHHHCCCeEEEEEEEehhhccccCCCCccCHHHHHH
Confidence 466777 9999999999987753 22 23457899999999999999999999998543211112 234666666
Q ss_pred HHHh-cC---cEe-EEecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHH--cCCcee
Q psy8199 758 EVKK-IG---LET-CLTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRN--VGINIC 827 (965)
Q Consensus 758 ~i~~-~~---~~i-~~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~--~Gi~v~ 827 (965)
.+.+ .| +.+ +.++..++++.++.+++.. +.++++.+|| |+++++.|+++++.+++++.++.+++ -.+.++
T Consensus 220 ~l~~I~G~~riR~~~~~P~~~~d~lI~~~~~~~kv~~~lHlPvQsGsd~ILk~M~R~yt~e~~~~~i~k~R~~~Pd~~i~ 299 (437)
T COG0621 220 ELSKIPGIERIRFGSSHPLEFTDDLIEAIAETPKVCPHLHLPVQSGSDRILKRMKRGYTVEEYLEIIEKLRAARPDIAIS 299 (437)
T ss_pred HHhcCCCceEEEEecCCchhcCHHHHHHHhcCCcccccccCccccCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCCceEe
Confidence 6655 23 233 3367788999999999952 6889999999 99999999999999999999999987 457889
Q ss_pred eeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCC-CCCCH
Q psy8199 828 CGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS-SILDP 879 (965)
Q Consensus 828 ~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~-~~~~~ 879 (965)
+.+|+|+ |||+||+.++++++++.+ ++.+.++.|-|.||||-+.. .+.+.
T Consensus 300 tDiIVGFPgETeedFe~tl~lv~e~~--fd~~~~F~YSpRpGTpAa~~~~qvp~ 351 (437)
T COG0621 300 TDIIVGFPGETEEDFEETLDLVEEVR--FDRLHVFKYSPRPGTPAALMPDQVPE 351 (437)
T ss_pred ccEEEECCCCCHHHHHHHHHHHHHhC--CCEEeeeecCCCCCCccccCCCCCCH
Confidence 9999999 799999999999999999 99999999999999998854 34444
No 321
>COG1242 Predicted Fe-S oxidoreductase [General function prediction only]
Probab=99.73 E-value=4.4e-16 Score=154.22 Aligned_cols=220 Identities=20% Similarity=0.285 Sum_probs=171.2
Q ss_pred HHHHHhcCCCeEEEeEeEeeccCCCCCC--------CCCCCCCCcCCCCcccccCCCH-HHHHHHHHHHHHC---CCCEE
Q psy8199 668 KVHRKYFDANEIELAVLLSIKTGGCTED--------CGYCPQSTHYNTEITATKILSI-ESVITAAQKAKSD---GATRF 735 (965)
Q Consensus 668 ~~~~~~~~g~~~~~~~~i~~~s~~C~~~--------C~fC~~~~~~~~~~~~~~~~~~-eei~~~~~~~~~~---g~~~i 735 (965)
.--|++| |.+++-.++- . .-.|||+ |.||+..... ....-+..+. +++.+.+..+.+. +-.-+
T Consensus 13 ~~lr~~f-g~Kv~Kv~ld-~-GF~CPNRDGti~rGGCtFC~~~g~~--d~~~~~~~~i~~Q~~~q~~~~~kK~~~~kyia 87 (312)
T COG1242 13 DYLREKF-GEKVFKVTLD-G-GFSCPNRDGTIGRGGCTFCSVAGSG--DFAGQPKISIAEQFKEQAERMHKKWKRGKYIA 87 (312)
T ss_pred HHHHHHh-CCeeEEEecc-C-CCCCCCCCCcccCCceeeecCCCCC--ccccCcccCHHHHHHHHHHHHHHhhcCCcEEE
Confidence 3336677 7777755433 3 6889985 9999766431 1111222344 4555555544433 33334
Q ss_pred EEeeccCCCCcccHHHHHHHHHHHHh----cCcEeEEecCCCCHHHHHHHHHhCCC---eEeccCCC-CHHHHhcccCCC
Q psy8199 736 CMGAAWRELKDRDLDNIENMICEVKK----IGLETCLTLGMLNENQAYRLKKVGLD---YYNHNLDT-SPKLYGDIISTR 807 (965)
Q Consensus 736 ~l~~g~~~~~~~~~~~~~~~~~~i~~----~~~~i~~~~~~~~~e~l~~Lk~aG~~---~i~i~~es-~~~~~~~i~~~~ 807 (965)
.|+.. +....+.+.+.+.....-. .|+.|.++++.+.+++++.|.+.--. .+.+|+|| ++++.+.|++.|
T Consensus 88 YFQ~~--TNTyApvevLre~ye~aL~~~~VVGLsIgTRPDClpd~VldlL~e~~~r~~vWvELGLQT~h~~Tlk~iNRgH 165 (312)
T COG1242 88 YFQAY--TNTYAPVEVLREMYEQALSEAGVVGLSIGTRPDCLPDDVLDLLAEYNKRYEVWVELGLQTAHDKTLKRINRGH 165 (312)
T ss_pred EEecc--ccccCcHHHHHHHHHHHhCcCCeeEEeecCCCCCCcHHHHHHHHHHhhheEEEEEeccchhhHHHHHHHhccc
Confidence 55555 4446778888888876653 57888999999999999999887432 45789999 999999999999
Q ss_pred CHHHHHHHHHHHHHcCCceeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC------CCCCCHH
Q psy8199 808 DYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG------SSILDPL 880 (965)
Q Consensus 808 ~~~~~~~~i~~~~~~Gi~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~------~~~~~~~ 880 (965)
+++.+.++++.+++.||+|++|+|+|| ||+.+++.++++.+..++ ++-|.+.++...+||||++ ....+.+
T Consensus 166 d~~~y~dav~r~rkrgIkvc~HiI~GLPgE~~~~mleTak~v~~~~--v~GIKlH~LhvvkgT~m~k~Y~~G~l~~ls~e 243 (312)
T COG1242 166 DFACYVDAVKRLRKRGIKVCTHLINGLPGETRDEMLETAKIVAELG--VDGIKLHPLHVVKGTPMEKMYEKGRLKFLSLE 243 (312)
T ss_pred chHHHHHHHHHHHHcCCeEEEEEeeCCCCCCHHHHHHHHHHHHhcC--CceEEEEEEEEecCChHHHHHHcCCceeccHH
Confidence 999999999999999999999999999 699999999999999999 9999999999999999984 4678999
Q ss_pred HHHHHHHHHHHHCCCC
Q psy8199 881 EFIRTIAVARITMPTS 896 (965)
Q Consensus 881 ~~~~~ia~~R~~lp~~ 896 (965)
++.++++-+-..+|+-
T Consensus 244 eYv~~~~d~le~lpp~ 259 (312)
T COG1242 244 EYVELVCDQLEHLPPE 259 (312)
T ss_pred HHHHHHHHHHHhCCcc
Confidence 9999998887777654
No 322
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=99.72 E-value=9.1e-16 Score=174.23 Aligned_cols=213 Identities=18% Similarity=0.268 Sum_probs=168.8
Q ss_pred EEEeEeEeeccCCCC-CCCCCCCCC-------CcCCCC-c-----ccccCCCHHHHHHHHHHHHHCC--CC--EEEEeec
Q psy8199 679 IELAVLLSIKTGGCT-EDCGYCPQS-------THYNTE-I-----TATKILSIESVITAAQKAKSDG--AT--RFCMGAA 740 (965)
Q Consensus 679 ~~~~~~i~~~s~~C~-~~C~fC~~~-------~~~~~~-~-----~~~~~~~~eei~~~~~~~~~~g--~~--~i~l~~g 740 (965)
|.+.++|.- --.|| .+|.||.-. ..|-.. . .+++.-+.+|+...++++...| .+ ++.|.||
T Consensus 66 v~~v~vm~~-p~~cph~~c~~cp~~~~~~~~~~sy~~~ep~~~ra~~~~~dpy~q~~~rl~~l~~~g~~~~kvE~i~~GG 144 (522)
T TIGR01211 66 VAVVAVMTS-PHRCPHGKCLYCPGGPDSENSPQSYTGYEPAAMRGRQNDYDPYEQVTARLEQLEQIGHPVDKVELIIMGG 144 (522)
T ss_pred eEEEEEecC-CccCCCCceEeCCCCCCcCCCCcccCCCCcHhHHHHHcCCCcHHHHHHHHHHHHHhCCCCceEEEEEECC
Confidence 444555543 46799 579999641 111110 0 1334457899999999999876 33 3366666
Q ss_pred cCCCCcccHHHHHHHHHHHHh-----------------------------cCcEeEEecCCCCHHHHHHHHHhCCCeEec
Q psy8199 741 WRELKDRDLDNIENMICEVKK-----------------------------IGLETCLTLGMLNENQAYRLKKVGLDYYNH 791 (965)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~i~~-----------------------------~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i 791 (965)
.+ ...+.++...+++.+.+ .++.+.+++..++++.++.|+++|++++.+
T Consensus 145 Tf--t~l~~~y~~~fl~~~~~a~~~~~~~~~~~~~~~~~~~~ne~a~~~~vgitiEtRPD~i~~e~L~~L~~~G~~rVsl 222 (522)
T TIGR01211 145 TF--PARDLDYQEWFIKRCLNAMNGFDQELKGNSTLEEAIRINETSKHRCVGLTIETRPDYCREEHIDRMLKLGATRVEL 222 (522)
T ss_pred Cc--ccCCHHHHHHHHHHHHHHhccccccccccchHHHHHHhhhcccCCeEEEEEEEcCCcCCHHHHHHHHHcCCCEEEE
Confidence 44 34555555555554432 234456788999999999999999999999
Q ss_pred cCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec-CCCHHHHHHHHHHHHh---cCCCCCceeecccccc
Q psy8199 792 NLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLAN---LNPYPESVPINNLVQI 866 (965)
Q Consensus 792 ~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl-~et~ed~~~~l~~l~~---l~~~~~~i~~~~~~P~ 866 (965)
|+|| ++++++.++++++.++..++++.++++|+.++.++|+|+ |+|.++..++++.+.+ ++ ++.+.++++.+.
T Consensus 223 GVQS~~d~VL~~inRght~~~v~~Ai~~lr~~G~~v~~~LM~GLPgqt~e~~~~t~~~l~~~~~l~--pD~Ikiypl~V~ 300 (522)
T TIGR01211 223 GVQTIYNDILERTKRGHTVRDVVEATRLLRDAGLKVVYHIMPGLPGSSFERDLEMFREIFEDPRFK--PDMLKIYPTLVT 300 (522)
T ss_pred ECccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEEEEeecCCCCCCHHHHHHHHHHHHhccCCC--cCEEEEecceee
Confidence 9999 999999999999999999999999999999999999999 6999999999999985 88 999999999999
Q ss_pred CCCCCCC------CCCCCHHHHHHHHHHHHHHCCCC
Q psy8199 867 KGTPLYG------SSILDPLEFIRTIAVARITMPTS 896 (965)
Q Consensus 867 ~gT~l~~------~~~~~~~~~~~~ia~~R~~lp~~ 896 (965)
+||+|++ ..+++.++++++++.+...+|++
T Consensus 301 ~gT~L~~~~~~G~y~p~t~ee~v~l~~~~~~~lp~~ 336 (522)
T TIGR01211 301 RGTELYELWKRGEYKPYTTEEAVELIVEIKRMMPKW 336 (522)
T ss_pred CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCcc
Confidence 9999984 57789999999999999999965
No 323
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.72 E-value=1.6e-15 Score=172.91 Aligned_cols=338 Identities=11% Similarity=-0.007 Sum_probs=195.7
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhcc------ccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE------HVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~------~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
.|..++|+..|.. .++ .+|.+.+++.+.+.+.. .|....+..+.+..+++.+.+. ....+++++|+|+++
T Consensus 31 ~~~~~i~l~~~~~--~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~d~I~it~Ga~~ 106 (402)
T TIGR03542 31 PSADIIRLGIGDT--TQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDPEEIFISDGAKC 106 (402)
T ss_pred CCCCeEEcCCCCC--CCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCHHHEEECCCcHH
Confidence 4678899887743 333 37888999988776531 1222223344445555543221 346789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|+...+.+. .++++|++.+++|.++.......+. +..... .........+|.......
T Consensus 107 al~~l~~l~---------~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~~~-~~~~~~~~~v~~~~~~~~----------- 164 (402)
T TIGR03542 107 DVFRLQSLF---------GSDNTVAVQDPVYPAYVDSNVMAGR-AGVLDD-DGRYSKITYLPCTKENNF----------- 164 (402)
T ss_pred HHHHHHHhc---------CCCCEEEEeCCCCcchHHHHHHcCC-cccccc-ccccceEEEeecchhhCC-----------
Confidence 998754322 2567899999999988544433332 111000 000002223332110000
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc-cccc-cccCCC
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFAC-EHAEIW 483 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~-~~~~~~ 483 (965)
+. ++++ .....+.++++| +|++|.+. +.+.+++|.++|++||+++|.||+|..|...+. .... ..-+..
T Consensus 165 -~~-~~~~----~~~~~~i~l~nP--~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~ 235 (402)
T TIGR03542 165 -IP-DLPE----EPKIDIIYLCSP--NNPTGTVL-TKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAK 235 (402)
T ss_pred -CC-Cccc----cCCceEEEEeCC--CCCCCccC-CHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCc
Confidence 00 1111 112234445555 99999866 777899999999999999999999998743322 1111 111111
Q ss_pred ccee---eeccccC-CCcccceeeeecHHHH--------HhhhccCCcccccccCCC-CCCHHHHHHHHHHHHHHh---c
Q psy8199 484 PDFL---CLSKGIT-GGYLPLSLVMTTDKIY--------NSIYYKNNINIFLHSHSY-SGNPLACCAALATLEIFN---K 547 (965)
Q Consensus 484 pDiv---t~sK~l~-gG~~pig~v~~~~~i~--------~~~~~~~~~~~~~~~~t~-~~~~~~~aaa~a~L~~~~---~ 547 (965)
..++ +|||.++ .| +++|+++++++++ ..+.. ....++ +.+++++.++.+.|+--. -
T Consensus 236 ~~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~ 307 (402)
T TIGR03542 236 ECAIEFRSFSKTAGFTG-VRLGWTVVPKELTYADGHSVIQDWER-------RQCTKFNGASYPVQRAAEAAYAGEGLQPI 307 (402)
T ss_pred ccEEEEecCccccCCCC-cceEEEEecHHHhhcchhhHHHHHHH-------HhhhcccCCCHHHHHHHHHHHcCcchhHH
Confidence 1233 7899886 45 8999999998876 22211 111223 357788887777764210 0
Q ss_pred ccHHHHHHHHHHHHHHHHHcccCCCceeeeece-eEEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeec-------C
Q psy8199 548 DNILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------G 618 (965)
Q Consensus 548 ~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~ 618 (965)
....+.++++.+++.+.|+.. ++....+. |.++.+.+. +.. ...++.+.+. +.||.+.|+ .
T Consensus 308 ~~~~~~~~~~~~~~~~~L~~~----~~~~~~~~~~~f~~v~l~--~~~----~~~~l~~~l~~~~gv~v~pg~~f~~~~~ 377 (402)
T TIGR03542 308 LEAISYYMENARILRKALEAA----GFKVYGGEHAPYLWVKTP--EGI----SSWDFFDFLLYQYHVVGTPGSGFGPSGE 377 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CceecCCCceeEEEEECC--CCC----CHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence 112344455556666666543 33333444 567777664 110 1235667766 579999874 2
Q ss_pred CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 619 NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 619 ~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
+++|++ +..+++++.++++++.++
T Consensus 378 ~~iRis--~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 378 GFVRFS--AFGKRENIVEACERIKEA 401 (402)
T ss_pred CEEEEE--ecCCHHHHHHHHHHHHhh
Confidence 689999 556889999998887653
No 324
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.72 E-value=2.6e-15 Score=171.86 Aligned_cols=335 Identities=11% Similarity=0.085 Sum_probs=207.9
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCC--C----CcHHHHHHHHHHHhhcCCC-CCeEEEcCChhHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN--L----THKPVIKLSEKLSSLTQYK-LGHCFYGSDGASA 326 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~--~----~~~~~~~la~~l~~~~~~~-~~~v~~~~sGseA 326 (965)
..|||..+. |-.++.+++|+.+.+.........+ . ..+...++.+.++++++.. .++++|++|+++|
T Consensus 19 ~~yld~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~ 92 (403)
T TIGR01979 19 LVYLDSAAT------SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTES 92 (403)
T ss_pred eEEEeCccc------cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHH
Confidence 478987653 3357889999987765431111011 0 1234567778899988765 5689999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+..++..+... ...++++|++.+..|++........ ..........++...... .
T Consensus 93 l~~~~~~~~~~----~~~~g~~vl~~~~~~~s~~~~~~~~---------~~~~g~~~~~v~~~~~~~------------~ 147 (403)
T TIGR01979 93 INLVAYSWGDS----NLKAGDEIVISEMEHHANIVPWQLL---------AERTGATLKFIPLDDDGT------------L 147 (403)
T ss_pred HHHHHHHhhhh----cCCCCCEEEECcchhhHHHHHHHHH---------HHhcCcEEEEEecCCCCC------------C
Confidence 98888754210 0034677888877766532110000 000111334444332111 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcce
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 486 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDi 486 (965)
|++++++.+. +++.+|++.. +++++|.+.+ +++|.++|++||+++|+|++|. +|.. ........+|+
T Consensus 148 ~~~~l~~~i~---~~~~lv~~~~-~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~ 214 (403)
T TIGR01979 148 DLDDLEKLLT---EKTKLVAITH-VSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM----PVDVQALDCDF 214 (403)
T ss_pred CHHHHHHHhc---cCCeEEEEEc-ccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc----ccCccccCCCE
Confidence 5788888875 3466666666 6899999887 8999999999999999999985 4321 11222335788
Q ss_pred ee--eccccCCCcccceeeeecHHHHHhhhcc---CCc-cccc----------cc-CCCCCCHHHHHHHHHHHHHHhc--
Q psy8199 487 LC--LSKGITGGYLPLSLVMTTDKIYNSIYYK---NNI-NIFL----------HS-HSYSGNPLACCAALATLEIFNK-- 547 (965)
Q Consensus 487 vt--~sK~l~gG~~pig~v~~~~~i~~~~~~~---~~~-~~~~----------~~-~t~~~~~~~~aaa~a~L~~~~~-- 547 (965)
++ ++|.++ . ..+|++++++++++.+..- +.. .... .. ..-+.+..+++++.++++.+.+
T Consensus 215 ~~~s~~K~~g-p-~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g 292 (403)
T TIGR01979 215 YVFSGHKMYG-P-TGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIG 292 (403)
T ss_pred EEEecccccC-C-CCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhC
Confidence 75 469653 2 3578898998887765320 000 0000 00 0012355567777788877654
Q ss_pred -ccHHHHHHHHHHHHHHHHHcccCCCceeeee-----ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec----
Q psy8199 548 -DNILQRISQDMKKITKALTSLITHPKIINFR-----QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---- 617 (965)
Q Consensus 548 -~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~-----g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---- 617 (965)
+.+.++..++.+++.+.|+++ +++..+. ..+.++.+.+. . . ....+.+.|.++||.++++
T Consensus 293 ~~~~~~~~~~l~~~l~~~l~~~---~g~~~~~~~~~~~~~~~v~~~~~--~----~-~~~~~~~~L~~~gI~v~~g~~~~ 362 (403)
T TIGR01979 293 LENIEAHEHELTAYALERLGEI---PGLRIYGPRDAEDRGGIISFNVE--G----V-HPHDVGTILDEEGIAVRSGHHCA 362 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCccccCceEEEEeC--C----c-CHHHHHHHHhhCCEEEcchhhhh
Confidence 345677777777777777654 3443222 23667777664 1 0 1235677888999998742
Q ss_pred ---------CCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 618 ---------GNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 618 ---------~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
++++|++++...++++++++++.+.+.
T Consensus 363 ~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~ 398 (403)
T TIGR01979 363 QPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKV 398 (403)
T ss_pred HHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHH
Confidence 358999999999999999999988653
No 325
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.72 E-value=1.1e-15 Score=172.03 Aligned_cols=319 Identities=14% Similarity=0.104 Sum_probs=197.5
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCC-CeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEE
Q psy8199 271 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 349 (965)
Q Consensus 271 ~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~v 349 (965)
.++++.+|+.+.+.. + ......+...++.+.+++.++... ..+++++||++|+..++.... .+++.|
T Consensus 10 ~~~~v~~a~~~~~~~--~--~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~--------~~g~~v 77 (356)
T cd06451 10 VPPRVLKAMNRPMLG--H--RSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL--------EPGDKV 77 (356)
T ss_pred CCHHHHHHhCCCccC--C--CCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC--------CCCCEE
Confidence 356777777543211 1 111123446788899999997533 457899999999999987653 245778
Q ss_pred EEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q psy8199 350 ICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEP 429 (965)
Q Consensus 350 i~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep 429 (965)
++.+.+|++...... .......+..+|..... ..|++++++.+.+ .++.+|++..
T Consensus 78 l~~~~~~~~~~~~~~-----------~~~~g~~~~~v~~~~~~------------~~~~~~l~~~i~~--~~~~~v~i~~ 132 (356)
T cd06451 78 LVGVNGVFGDRWADM-----------AERYGADVDVVEKPWGE------------AVSPEEIAEALEQ--HDIKAVTLTH 132 (356)
T ss_pred EEecCCchhHHHHHH-----------HHHhCCCeEEeecCCCC------------CCCHHHHHHHHhc--cCCCEEEEec
Confidence 888776655311100 00111234444432111 1367888888863 2455666655
Q ss_pred ccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeee--ccccCCCcccceeeeecH
Q psy8199 430 LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGYLPLSLVMTTD 507 (965)
Q Consensus 430 ~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~--sK~l~gG~~pig~v~~~~ 507 (965)
+++++|.+.+ +++|.++|+++|+++|+|++|. +|.. .+....+ .+|+++. +|.++++ .++|+++.++
T Consensus 133 -~~~~~G~~~~----~~~i~~~a~~~~~~li~D~~~~-~g~~--~~~~~~~--~~d~~~~s~~K~l~~p-~g~G~l~~~~ 201 (356)
T cd06451 133 -NETSTGVLNP----LEGIGALAKKHDALLIVDAVSS-LGGE--PFRMDEW--GVDVAYTGSQKALGAP-PGLGPIAFSE 201 (356)
T ss_pred -cCCCcccccC----HHHHHHHHHhcCCEEEEeeehh-ccCc--ccccccc--CccEEEecCchhccCC-CCcceeEECH
Confidence 5788998877 8899999999999999999985 6532 2222222 3577654 6988875 4689999999
Q ss_pred HHHHhhhc-cCCcccc---------cc---cCCCCCCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHcccCC
Q psy8199 508 KIYNSIYY-KNNINIF---------LH---SHSYSGNPLACCAALATLEIFNKD---NILQRISQDMKKITKALTSLITH 571 (965)
Q Consensus 508 ~i~~~~~~-~~~~~~~---------~~---~~t~~~~~~~~aaa~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~ 571 (965)
++++.+.. ......+ .. ..+.+.++.+++++.++++.+... .+.++.+++.+++.+.|+++ ..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 280 (356)
T cd06451 202 RALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GL 280 (356)
T ss_pred HHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 88876642 0000000 00 112234566677777888776543 45677778888888888765 11
Q ss_pred Cceeeeecee-EEEEEEEeecCccchhhHHHHHHHHHHHc-CcEEeec-----CCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 572 PKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 572 ~~i~~v~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
..+....+.+ .+..+.+. ++ .....+.+.|.++ ||.+.++ ++++|++|+..+++++++++++++..+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~ 354 (356)
T cd06451 281 KLLAKPELRSPTVTAVLVP--EG----VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEA 354 (356)
T ss_pred eeccCcccCCCceEEEECC--CC----CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 1111111122 22233322 11 1134678888888 9998753 368999999999999999999988653
No 326
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=1.3e-15 Score=169.91 Aligned_cols=335 Identities=13% Similarity=0.154 Sum_probs=222.3
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhcc-ccccC-----CCCcHHHHHHHHHHHhhcCCC-CCeEEEcCChhHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLS-----NLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGASA 326 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~-~~~~~-----~~~~~~~~~la~~l~~~~~~~-~~~v~~~~sGseA 326 (965)
-.|+|..++. ..+..|++++.+...... ..+.. ....+..++..+.++++++.+ .+.|+||++.|+|
T Consensus 23 ~vylD~aa~~------~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAATS------QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred eEEecCcccc------cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH
Confidence 3689987652 368899999998775431 11111 123345567778888999877 4899999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
+........... .+++.||+.+.-+|....- |.....-....+..+|... .+. .
T Consensus 97 ln~va~~l~~~~-----~~gdeIv~s~~EH~sn~~p---------w~~~~~~~Ga~v~~i~~~~-~g~-----------~ 150 (405)
T COG0520 97 LNLVARGLGRSL-----KPGDEIVVSDLEHHSNIVP---------WQELAKRTGAKVRVIPLDD-DGL-----------L 150 (405)
T ss_pred HHHHHHHhhhhh-----cCCCEEEEccCcchhhHHH---------HHHHHHhcCcEEEEEecCC-CCC-----------c
Confidence 998877553211 2458899988777775221 1111111112455666542 111 3
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcce
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 486 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDi 486 (965)
++++++..+ ++++..|.+.- +.|.+|.+.| +++|.++|+++|+++++|-+|+ +|. ...+...+..|+
T Consensus 151 ~~~~~~~~i---~~~Tklvais~-vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~h----~~idv~~l~~Df 217 (405)
T COG0520 151 DLDALEKLI---TPKTKLVALSH-VSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AGH----LPIDVQELGCDF 217 (405)
T ss_pred CHHHHHHhc---CCCceEEEEEC-ccccccccch----HHHHHHHHHHcCCEEEEECccc-cCc----cCCCchhcCCCE
Confidence 678888766 46788888888 8999999998 9999999999999999999996 432 233334556899
Q ss_pred eeec--cccCCCcccceeeeecHHHHHhhhc---cCCccc-cc--ccCCC----------CCCHHHHHHHHHHHHHHhc-
Q psy8199 487 LCLS--KGITGGYLPLSLVMTTDKIYNSIYY---KNNINI-FL--HSHSY----------SGNPLACCAALATLEIFNK- 547 (965)
Q Consensus 487 vt~s--K~l~gG~~pig~v~~~~~i~~~~~~---~~~~~~-~~--~~~t~----------~~~~~~~aaa~a~L~~~~~- 547 (965)
++|| |.|.|. -.+|.+.+++++.+.+.. ++..-. .. ...++ +.|..+..+..++++++++
T Consensus 218 ~afsgHKwl~gP-~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~i 296 (405)
T COG0520 218 LAFSGHKWLLGP-TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEI 296 (405)
T ss_pred EEEcccccccCC-CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHH
Confidence 9998 667664 578999999999987632 110000 00 01111 1233444445566766654
Q ss_pred --ccHHHHHHHHHHHHHHHHHcccCCCceeee----eceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC---
Q psy8199 548 --DNILQRISQDMKKITKALTSLITHPKIINF----RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--- 618 (965)
Q Consensus 548 --~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v----~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--- 618 (965)
+.+.++.+++.+++.+.|+++ |++... ..++.+++|.+. . .....+...|.++||.++.+.
T Consensus 297 g~~~i~~~e~~L~~~~~~~L~~~---~~v~i~g~~~~~r~~~vsF~v~--~-----~~~~dv~~~L~~~gI~vr~g~~ca 366 (405)
T COG0520 297 GMEAIEAHERELTEYLLEGLSEL---PGVEIYGPPDADRGGIVSFNVK--G-----IHPHDVATLLDEKGIAVRAGHHCA 366 (405)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCcccCceEEEEEeC--C-----CCHHHHHHHHHhCCeEEEeccccc
Confidence 446677777777777777665 444321 135777887775 1 124567889999998888642
Q ss_pred ----------CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 619 ----------NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 619 ----------~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
..+|+++.+..|.+|++.+++.+++.
T Consensus 367 ~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405)
T COG0520 367 QPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA 402 (405)
T ss_pred cHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 23999999999999999999988764
No 327
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.72 E-value=3.3e-15 Score=169.28 Aligned_cols=321 Identities=12% Similarity=0.064 Sum_probs=200.2
Q ss_pred CCHHHHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEE
Q psy8199 271 SNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 349 (965)
Q Consensus 271 ~~p~v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~v 349 (965)
.+|.+.+|+...+... ..........+...++.+.++++++.+.+.+++++||++++..++..++.... .+ .+++.|
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~g~~v 109 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAR-EE-KRTPNI 109 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHh-cc-CCCcEE
Confidence 5778888887765432 11111112234457888999999976666888999999999999887654210 00 133678
Q ss_pred EEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q psy8199 350 ICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEP 429 (965)
Q Consensus 350 i~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep 429 (965)
++.+++|.++...+ ... ...+..++.+... ..|++++++++.+ ...+.+++.|
T Consensus 110 l~~~~~h~~~~~~~-~~~------------G~~~~~v~~~~~~------------~~d~~~l~~~l~~--~~~~vv~~~~ 162 (373)
T TIGR03812 110 IVPESAHFSFEKAA-EML------------GLELRYAPLDEDY------------TVDVKDVEDLIDD--NTIGIVGIAG 162 (373)
T ss_pred EECCcchHHHHHHH-HHc------------CCeEEEEeeCCCC------------CcCHHHHHHHHhh--CcEEEEEECC
Confidence 88887775542111 111 1123444432211 1378889888864 2345566666
Q ss_pred ccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc--c-c---cccccCCCcceeeec--cccCCCcccce
Q psy8199 430 LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--F-F---ACEHAEIWPDFLCLS--KGITGGYLPLS 501 (965)
Q Consensus 430 ~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~-~---~~~~~~~~pDivt~s--K~l~gG~~pig 501 (965)
.+++|.+.+ +++|.++|+++|+++|+|++|.++ ..+. . . .....-...|.+++| | ++.+..|.|
T Consensus 163 --~~~tG~~~~----~~~i~~l~~~~~~~livD~a~~~~-~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K-~~~~~~~~G 234 (373)
T TIGR03812 163 --TTELGQIDD----IEELSKIALENGIYLHVDAAFGGF-VIPFLKKGYNPPPFDFSLPGVQSITIDPHK-MGLSPIPAG 234 (373)
T ss_pred --CCCCCccCC----HHHHHHHHHHcCCeEEEEcCchhH-HHHHHhcCCCCCCccccCCCCCEEEECccc-cCCCcCCce
Confidence 678898877 899999999999999999999743 1110 0 0 011101134666654 6 333225787
Q ss_pred eee-ecHHHHHhhhccCCcccccccC---C--CCCCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHcccCCC
Q psy8199 502 LVM-TTDKIYNSIYYKNNINIFLHSH---S--YSGNPLACCAALATLEIFNKD---NILQRISQDMKKITKALTSLITHP 572 (965)
Q Consensus 502 ~v~-~~~~i~~~~~~~~~~~~~~~~~---t--~~~~~~~~aaa~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~ 572 (965)
+++ .++++++.+... .++..+. + .+.++.+++++.++|+.+.++ +..++..++.++|+++|+++ +
T Consensus 235 ~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~---g 308 (373)
T TIGR03812 235 GILFRSKSYLKYLSVD---APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI---G 308 (373)
T ss_pred EEEEeCHHHHhhhccc---CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---C
Confidence 655 577777766421 1121111 0 123456788888889877543 36788888899999988775 2
Q ss_pred ceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--CCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 573 KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--GNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 573 ~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
....+.+...++.+.+. + ...+.+.|.++|+++.+. .+.+|++++..+++++++.+++++.+
T Consensus 309 ~~~~~~~~~~~v~~~~~--~-------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 309 FEPVIEPVLNIVAFEVD--D-------PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred CeEEcCCCceEEEEEeC--C-------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 11122344455555442 1 235778899999999865 36899999888999999999998764
No 328
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.71 E-value=2.2e-15 Score=172.93 Aligned_cols=345 Identities=14% Similarity=0.105 Sum_probs=198.4
Q ss_pred ccccccccchhccCCCCC--HHHHHHHHHHHhhc------cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCChh
Q psy8199 255 RYLDAISSWWVNLFGHSN--SYINKALKNQLNKL------EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGA 324 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~--p~v~~av~~~~~~~------~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGs 324 (965)
..+|+..|... + ... +.+.+++.+.+... ..|....+..+.+..+++.+.+..+ ...++|++|+|++
T Consensus 31 ~~i~l~~g~p~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNPA--H-IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCCCCC--c-cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 45777765321 1 111 34566666655431 1233334455677777877766543 3567999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEE-EcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFIC-LQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~-~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
+|+..++.+.... .+...++.|++ .+++|+++...+...+. +.... ....+.+...+ . +
T Consensus 108 ~al~~~~~~l~~~---~~~~~gd~v~i~~~P~y~~y~~~~~~~~~-------~~~~~--~~~~~~~~~~~-~-------~ 167 (416)
T PRK09440 108 SAFFYLFNLFAGR---RADGSLKKILFPLAPEYIGYADAGLEEDL-------FVSYR--PNIELLPEGQF-K-------Y 167 (416)
T ss_pred HHHHHHHHHHhcc---ccCCCCCeEEEecCCCchhhHHHhhccCc-------eeecc--ccccccccccc-c-------c
Confidence 9999988866420 00013567888 69999998543221110 00000 01111111000 0 0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 404 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 404 ~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
..|+++|+ +. ....+.++++| +|++|.+. +.+.+++|.++|++|++++|+||+|..+- ....+........
T Consensus 168 -~~d~~~l~--~~--~~~~~i~l~~P--~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~ 238 (416)
T PRK09440 168 -HVDFEHLH--ID--EDTGAICVSRP--TNPTGNVL-TDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWN 238 (416)
T ss_pred -CCCHHHcc--cC--CCceEEEEecC--CCCCCccC-CHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCcccc
Confidence 02456665 22 22234455555 89999876 77789999999999999999999995321 1100000000112
Q ss_pred ccee---eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--c---ccHHHHHH
Q psy8199 484 PDFL---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--K---DNILQRIS 555 (965)
Q Consensus 484 pDiv---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~--~---~~~~~~~~ 555 (965)
+.++ +|||....| +++|++++++++++.+.. .......+.+.+++.++.++|+--. . ..+....+
T Consensus 239 ~~vI~~~SfSK~~~pG-lRiG~~i~~~~l~~~~~~------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 311 (416)
T PRK09440 239 PNIILCMSLSKLGLPG-VRCGIVIADEEIIEALSN------MNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYR 311 (416)
T ss_pred CCeEEEecccccCCCc-ceEEEEeCCHHHHHHHHH------HHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3444 689964445 899999999999888765 1222334568889988888884211 0 01222334
Q ss_pred HHHHHHHHHHHcccCCCceeeeece-eEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----C---------CE
Q psy8199 556 QDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----G---------NT 620 (965)
Q Consensus 556 ~~~~~l~~~L~~l~~~~~i~~v~g~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~---------~~ 620 (965)
++.+.+.+.|.+......+....+. |+++++.+. .... ....+.+.|.++||.+.|+ + ++
T Consensus 312 ~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~-~~~~----~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~ 386 (416)
T PRK09440 312 QKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFK-DLPI----TTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQC 386 (416)
T ss_pred HHHHHHHHHHHHhcccCCeEEecCCCceEEEEECC-CCCC----CHHHHHHHHHHCCEEEechHhhCCCCccccCCcCce
Confidence 4445555555443111123334565 566666664 1011 1345777788999999873 1 37
Q ss_pred EEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 621 VYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 621 lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
+|++ +..+.++++++++++.+.+
T Consensus 387 iRis--~~~~~~~l~~~i~~l~~~~ 409 (416)
T PRK09440 387 IRMN--YVQDDEEIEKGIAILAEEV 409 (416)
T ss_pred EEEE--ecCCHHHHHHHHHHHHHHH
Confidence 9999 4457899999998887654
No 329
>TIGR00538 hemN oxygen-independent coproporphyrinogen III oxidase. This model represents HemN, the oxygen-independent coproporphyrinogen III oxidase that replaces HemF function under anaerobic conditions. Several species, including E. coli, Helicobacter pylori, and Aquifex aeolicus, have both a member of this family and a member of another, closely related family for which there is no evidence of coproporphyrinogen III oxidase activity. Members of this family have a perfectly conserved motif PYRT[SC]YP in a region N-terminal to the region of homology with the related uncharacterized protein.
Probab=99.71 E-value=8.2e-16 Score=176.45 Aligned_cols=201 Identities=11% Similarity=0.195 Sum_probs=156.4
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH-----CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc-
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS-----DGATRFCMGAAWRELKDRDLDNIENMICEVKKI- 762 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~-----~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~- 762 (965)
-..|+.+|.||.+....... ........+.++++++...+ .+++.|.|.||... ..+.+++.++++.+++.
T Consensus 56 iPFC~~~C~yC~~~~~~~~~-~~~~~~y~~~L~~Ei~~~~~~~~~~~~v~~I~fgGGtP~--~l~~~~l~~ll~~i~~~~ 132 (455)
T TIGR00538 56 IPFCHKACYFCGCNVIITRQ-KHKADPYLDALEKEIALVAPLFDGNRHVSQLHWGGGTPT--YLSPEQISRLMKLIRENF 132 (455)
T ss_pred eCCccCcCCCCCCCccCCCC-cchHHHHHHHHHHHHHHHHHhcCCCCceEEEEECCCCcC--CCCHHHHHHHHHHHHHhC
Confidence 36799999999987643211 11111236777877776532 36888888777432 33567777777777652
Q ss_pred ----C--cEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEEEec
Q psy8199 763 ----G--LETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGIIGL 834 (965)
Q Consensus 763 ----~--~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl 834 (965)
+ +.+.+++..++++.++.|+++|++++.+|+|| ++++++.+++.++.++..++++.++++|+. +...+|+|+
T Consensus 133 ~~~~~~eitie~np~~l~~e~l~~lk~~G~~risiGvqS~~~~~l~~l~r~~~~~~~~~ai~~l~~~G~~~v~~dli~Gl 212 (455)
T TIGR00538 133 PFNADAEISIEIDPRYITKDVIDALRDEGFNRLSFGVQDFNKEVQQAVNRIQPEEMIFELMNHAREAGFTSINIDLIYGL 212 (455)
T ss_pred CCCCCCeEEEEeccCcCCHHHHHHHHHcCCCEEEEcCCCCCHHHHHHhCCCCCHHHHHHHHHHHHhcCCCcEEEeEEeeC
Confidence 2 44566788899999999999999999999999 999999999999999999999999999995 889999999
Q ss_pred -CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCC-CCC----CCCCCCHHHHHHHHHHHHHHCC
Q psy8199 835 -SESRDQRAELIFQLANLNPYPESVPINNLVQIKGT-PLY----GSSILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 835 -~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT-~l~----~~~~~~~~~~~~~ia~~R~~lp 894 (965)
++|.+++.++++.+.+++ ++.+.++.+.+.|++ +.. ....++.++..+++..++..+.
T Consensus 213 Pgqt~e~~~~tl~~~~~l~--~~~is~y~L~~~p~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~L~ 276 (455)
T TIGR00538 213 PKQTKESFAKTLEKVAELN--PDRLAVFNYAHVPWVKPAQRKIPEAALPSAEEKLDILQETIAFLT 276 (455)
T ss_pred CCCCHHHHHHHHHHHHhcC--CCEEEEecCccccchhHHHhcccccCCCCHHHHHHHHHHHHHHHH
Confidence 699999999999999999 999999999776653 222 2234578888888777766553
No 330
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.71 E-value=2.1e-15 Score=173.32 Aligned_cols=339 Identities=12% Similarity=0.091 Sum_probs=209.6
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhccccccC--CC----CcHHHHHHHHHHHhhcCCC-CCeEEEcCChhH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLS--NL----THKPVIKLSEKLSSLTQYK-LGHCFYGSDGAS 325 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~--~~----~~~~~~~la~~l~~~~~~~-~~~v~~~~sGse 325 (965)
+..|||..+. |..++.|.+++.+.+......... .+ ..+...++.+.++++++.. .++|+|++|+|+
T Consensus 32 ~~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 32 KLVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 4578997543 336788999998877653211101 11 1223457778899998764 469999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|+..+++..... ...++++|++.+..|++........ .......+..++......
T Consensus 106 al~~i~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~---------a~~~g~~v~~v~~~~~~~------------ 160 (424)
T PLN02855 106 AINLVAYTWGLA----NLKPGDEVILSVAEHHSNIVPWQLV---------AQKTGAVLKFVGLTPDEV------------ 160 (424)
T ss_pred HHHHHHHHhhhh----cCCCcCEEEECCCccHHHHHHHHHH---------HHHcCCEEEEEecCCCCC------------
Confidence 999888743100 0034577888887765431111000 001112334444321111
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
.|++++++.+.+ ++.+|++.. +++++|.+.| +++|.++|+++|+++|+|++|. +|.. ........+|
T Consensus 161 ~~~~~l~~~i~~---~t~lv~i~~-~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~----~~~~~~~~~d 227 (424)
T PLN02855 161 LDVEQLKELLSE---KTKLVATHH-VSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM----PVDVQTLGAD 227 (424)
T ss_pred cCHHHHHHHhcc---CceEEEEeC-ccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc----CCCchhcCCC
Confidence 367888888852 556667776 7999999988 8899999999999999999995 5432 1222233478
Q ss_pred eee--eccccCCCcccceeeeecHHHHHhhhcc--CCcc---cc---------cccCCC-CCCHHHHHHHHHHHHHHhc-
Q psy8199 486 FLC--LSKGITGGYLPLSLVMTTDKIYNSIYYK--NNIN---IF---------LHSHSY-SGNPLACCAALATLEIFNK- 547 (965)
Q Consensus 486 ivt--~sK~l~gG~~pig~v~~~~~i~~~~~~~--~~~~---~~---------~~~~t~-~~~~~~~aaa~a~L~~~~~- 547 (965)
+++ +.| +.|. ..+|++++++++++.+..- +... .+ ...... +.+..+.++..++|+.+.+
T Consensus 228 ~~~~s~~K-~~gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~ 305 (424)
T PLN02855 228 FLVASSHK-MCGP-TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEI 305 (424)
T ss_pred EEEeeccc-ccCC-CccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHh
Confidence 875 568 4442 3589999998887665321 0000 00 000011 2345566777778877654
Q ss_pred --ccHHHHHHHHHHHHHHHHHcccCCCceeee-------eceeEEEEEEEeecCccchhhHHHHHHHHHHHc-CcEEeec
Q psy8199 548 --DNILQRISQDMKKITKALTSLITHPKIINF-------RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI 617 (965)
Q Consensus 548 --~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-------~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~ 617 (965)
+.+.++.+++.+++++.|+++ +++..+ ...+.++.+.+. . .....+.+.|.++ ||.++.+
T Consensus 306 g~~~i~~~~~~l~~~l~~~L~~~---~g~~i~~~~~~~~~~r~~~v~~~~~--~-----~~~~~v~~~L~~~~gI~v~~g 375 (424)
T PLN02855 306 GMDRIHEYEVELGTYLYEKLSSV---PGVRIYGPKPSEGVGRAALCAFNVE--G-----IHPTDLSTFLDQQHGVAIRSG 375 (424)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCcccccCcccEEEEEEC--C-----cCHHHHHHHhcccCCEEEech
Confidence 335566777777777777654 343322 123456666653 1 0133577788777 9988742
Q ss_pred -------------CCEEEEeCCcccCHHHHHHHHHhhhccccc
Q psy8199 618 -------------GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 618 -------------~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~ 647 (965)
.+.+|+++++..+.+|++++++.+.+....
T Consensus 376 ~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 376 HHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred hhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 157999999999999999999998765543
No 331
>COG0320 LipA Lipoate synthase [Coenzyme metabolism]
Probab=99.71 E-value=7.3e-16 Score=152.29 Aligned_cols=194 Identities=23% Similarity=0.341 Sum_probs=160.5
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccC-CCCcccHHHHHHHHHHHHhcCcEeE
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWR-ELKDRDLDNIENMICEVKKIGLETC 767 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~-~~~~~~~~~~~~~~~~i~~~~~~i~ 767 (965)
...|..+|.||..... .+. .++++|-.+.++..+.+|.+.+.|++... ++.+.....+.+.+++|++.++.+.
T Consensus 77 G~~CTR~C~FC~V~~g-~P~-----~lD~~EP~rvAeaV~~mgLkyVViTsVdRDDL~DGGA~hfa~~i~~Ire~~P~t~ 150 (306)
T COG0320 77 GDICTRRCRFCDVKTG-RPN-----PLDPDEPERVAEAVKDMGLKYVVITSVDRDDLPDGGAQHFAECIRAIRELNPQTT 150 (306)
T ss_pred cchhccCCCccccCCC-CCC-----CCCCchHHHHHHHHHHhCCCeEEEEeeccccccccchHHHHHHHHHHHhhCCCce
Confidence 7899999999987652 222 48899999999999999999999999876 6677789999999999998654433
Q ss_pred E----ecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhcccCCCCHHHHHHHHHHHHHcC--CceeeeEEEecCCCHHHH
Q psy8199 768 L----TLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVG--INICCGGIIGLSESRDQR 841 (965)
Q Consensus 768 ~----~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~~~~~~~~~~~i~~~~~~G--i~v~~~~i~Gl~et~ed~ 841 (965)
+ ....-.++.++.+.++|.+.+++++||.++++..++++.+|++-++.++.+++.+ +.+.+++|+|||||.+++
T Consensus 151 iEvL~PDF~G~~~al~~v~~~~pdV~nHNvETVprL~~~VRp~A~Y~~SL~~L~~~k~~~P~i~TKSgiMlGLGEt~~Ev 230 (306)
T COG0320 151 IEVLTPDFRGNDDALEIVADAGPDVFNHNVETVPRLYPRVRPGATYERSLSLLERAKELGPDIPTKSGLMVGLGETDEEV 230 (306)
T ss_pred EEEeCccccCCHHHHHHHHhcCcchhhcccccchhcccccCCCCcHHHHHHHHHHHHHhCCCcccccceeeecCCcHHHH
Confidence 3 3233388999999999999999999999999999999999999999999999998 899999999999999999
Q ss_pred HHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHH
Q psy8199 842 AELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVAR 890 (965)
Q Consensus 842 ~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R 890 (965)
.++++-|++.+ .+.+.+..|+...---+.-..-.+++++...-.++.
T Consensus 231 ~e~m~DLr~~g--vdilTiGQYlqPS~~HlpV~ryv~PeeF~~~~~~a~ 277 (306)
T COG0320 231 IEVMDDLRSAG--VDILTIGQYLQPSRKHLPVQRYVTPEEFDELEEVAE 277 (306)
T ss_pred HHHHHHHHHcC--CCEEEeccccCCccccCCceeccCHHHHHHHHHHHH
Confidence 99999999999 899999888654332233334456666665544444
No 332
>PLN02397 aspartate transaminase
Probab=99.70 E-value=2.4e-15 Score=171.87 Aligned_cols=340 Identities=8% Similarity=-0.017 Sum_probs=192.8
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHH----Hhhc--cccccCCCCcHHHHHHHHHHHhhcCCC--CCeE--EEcCCh
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQ----LNKL--EHVMLSNLTHKPVIKLSEKLSSLTQYK--LGHC--FYGSDG 323 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~----~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~--~~~v--~~~~sG 323 (965)
...|++..|....+- .+|.+.+++.++ +... .+|....+..+.+..+++++.+..... .+++ ..+.+|
T Consensus 48 ~~~l~l~~g~~p~~~--~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g 125 (423)
T PLN02397 48 PVKLNLGVGAYRTEE--GKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSG 125 (423)
T ss_pred cceEecccceeeCCC--CCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccc
Confidence 455777666322222 234444555444 2211 124444555666677777665443211 1233 113444
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecC-CCCCCCCCCCChhH
Q psy8199 324 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PDSRNINKGNSANE 402 (965)
Q Consensus 324 seA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 402 (965)
+.|...++.+.... .++++|++.+++|.++...+...++ ..+.+|. +.....
T Consensus 126 ~Ga~~l~~~~~~~~------~pGd~Vlv~~P~y~~y~~~~~~~g~-------------~~~~v~l~~~~~~~-------- 178 (423)
T PLN02397 126 TGSLRLGAEFLARF------YPGSTIYIPNPTWGNHHNIFRDAGV-------------PVRTYRYYDPKTRG-------- 178 (423)
T ss_pred hHHHHHHHHHHHHh------CCCCEEEEeCCCchhHHHHHHHcCC-------------eEEEeecccCcCCc--------
Confidence 44444333333322 2568899999999888444333332 2233332 111111
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccc---ccccccc
Q psy8199 403 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG---KFFACEH 479 (965)
Q Consensus 403 ~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~~~~~~ 479 (965)
.|++.+++.+.+...++.++++.. ++|++|.+. +.+.+++|.++|++||+++|+||+|.+|...+ .......
T Consensus 179 ---~d~~~l~~~l~~~~~~~~~i~~~~-P~NPTG~v~-s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~ 253 (423)
T PLN02397 179 ---LDFDGLLEDLKAAPDGSFVLLHAC-AHNPTGVDP-TPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRM 253 (423)
T ss_pred ---cCHHHHHHHHHhCCCCCEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHH
Confidence 366777777754434455555554 599999876 78889999999999999999999999985422 1111111
Q ss_pred c-CCCccee---eeccccC-CCcccceeee--e-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-----
Q psy8199 480 A-EIWPDFL---CLSKGIT-GGYLPLSLVM--T-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN----- 546 (965)
Q Consensus 480 ~-~~~pDiv---t~sK~l~-gG~~pig~v~--~-~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~----- 546 (965)
+ ...++++ +|||.++ .| |++|+++ + ++++++.+... .........++.+.++++++.++|+.-.
T Consensus 254 ~~~~~~~vI~~~SfSK~~~~~G-~RvG~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~ 330 (423)
T PLN02397 254 FVEDGHEILVAQSYAKNMGLYG-ERVGALSVVCKSADVAVRVKSQ--LKLIARPMYSNPPIHGASIVATILGDPELFSEW 330 (423)
T ss_pred HHhcCCcEEEEEECcccCCCcc-ccceEEEEEeCCHHHHHHHHHH--HHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHH
Confidence 1 1112344 6899887 35 9999974 3 55554433210 0001111223456678877777774210
Q ss_pred ---cccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHH-HHcCcEEeecCCEEE
Q psy8199 547 ---KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPIGNTVY 622 (965)
Q Consensus 547 ---~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~~~lR 622 (965)
-++..++++++.+.+.+.|+++..-..+..+.++|.|+.+.-. + ..+++.| .+.||.+.+.+ |
T Consensus 331 ~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l--~--------~~~~~~Ll~~~~V~v~~~~---R 397 (423)
T PLN02397 331 TKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGL--N--------KEQVDRMTKEYHIYMTRDG---R 397 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCC--C--------HHHHHHHHHhCCEEECCCC---e
Confidence 1234556777777787877765110124456678887766432 1 1354555 47799997643 8
Q ss_pred EeCCcc-cCHHHHHHHHHhhhccc
Q psy8199 623 LMPPYI-LNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 623 ~~p~~~-~t~~~i~~~~~~l~~~~ 645 (965)
++ ++ .+.+.++++++++.+++
T Consensus 398 i~--~~~~~~~~i~~~~~~i~~~~ 419 (423)
T PLN02397 398 IS--MAGLSSKNVPYLADAIHAVV 419 (423)
T ss_pred EE--EeeCCHHHHHHHHHHHHHHH
Confidence 88 44 88899999999988764
No 333
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.70 E-value=3.9e-15 Score=168.96 Aligned_cols=334 Identities=13% Similarity=0.078 Sum_probs=197.2
Q ss_pred cccccccchhccCCCCCHHHHHHHHHHHhhcccc--ccCCCCcHHHHHHHHHH---HhhcCC-CCCeEEEcCChhHHHHH
Q psy8199 256 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV--MLSNLTHKPVIKLSEKL---SSLTQY-KLGHCFYGSDGASAVEV 329 (965)
Q Consensus 256 ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~--~~~~~~~~~~~~la~~l---~~~~~~-~~~~v~~~~sGseA~~~ 329 (965)
|+|..++.. .++.|++++.+.+...... ....+.......+.+.+ .+.++. ..++++|++|++||+..
T Consensus 2 yld~aa~~~------~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATTM------LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCCC------CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 889877654 6889999999887653111 11112222233343333 333432 46799999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
+++.+.... . -.+++++|++.+..|+........+ ......+..+|.+.. +. .|++
T Consensus 76 ~~~~~~~~~-~-~~~~~~~vi~~~~e~ps~~~~~~~~----------~~~G~~v~~v~~~~~-g~-----------~d~~ 131 (382)
T TIGR03403 76 VLKGVYFDE-I-LKGGKNHIITTEVEHPAVRATCAFL----------ESLGVEVTYLPINEQ-GT-----------ITAE 131 (382)
T ss_pred HHHHHHHhh-c-ccCCCCEEEEcCCccHHHHHHHHHH----------HHCCCEEEEEecCCC-CC-----------CCHH
Confidence 988652100 0 0123456777765444332111000 011123445554321 11 2678
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeee
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL 489 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~ 489 (965)
+|++++.+ ++.+|++.. ++|++|.+.+ +++|.++|+++|+++|+|++|. +|.. ........+|++++
T Consensus 132 ~l~~~i~~---~t~lv~~~~-~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~----~~~~~~~~~D~~~~ 198 (382)
T TIGR03403 132 QVREAITE---KTALVSVMW-ANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI----PVDVQKAGVDFLSF 198 (382)
T ss_pred HHHHhccc---CCeEEEEEc-ccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC----ccCccccCCCEEEE
Confidence 88888753 345666666 6899999987 8899999999999999999986 4321 12222345799988
Q ss_pred c--cccCCCcccceeeeecHHHH-HhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHH
Q psy8199 490 S--KGITGGYLPLSLVMTTDKIY-NSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKA 564 (965)
Q Consensus 490 s--K~l~gG~~pig~v~~~~~i~-~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~~~ 564 (965)
| |. .|. ..+|++..++... .....++.+.... ...+.|..++.++.++|+...+ +...++++++.+++.++
T Consensus 199 s~~K~-~gp-~G~g~l~vr~~~~~~p~~~g~~~~~~~--~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~ 274 (382)
T TIGR03403 199 SAHKF-HGP-KGVGGLYIRKGVELTPLFHGGEHMGGR--RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDA 274 (382)
T ss_pred cchhh-CCC-CceEEEEECCCCCCCCcccCCCCCCCc--ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 7 84 332 2367777765431 1111100000001 1234577777777788876543 22345666677777777
Q ss_pred HHcccCCCceeeeece----eEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----------------------
Q psy8199 565 LTSLITHPKIINFRQK----GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----------------------- 617 (965)
Q Consensus 565 L~~l~~~~~i~~v~g~----G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------------------- 617 (965)
|.++ +++..+.+. ..++.+.+. . .. ...+...|.++||.++.+
T Consensus 275 L~~~---~~~~~~~~~~~~~~~~~~~~~~--~----~~-~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~ 344 (382)
T TIGR03403 275 LLEL---PDVFVVGDREHRVPNTILISIK--G----VE-GEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKEL 344 (382)
T ss_pred HhcC---CCEEEECCCCCCcCCEEEEEeC--C----CC-HHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHH
Confidence 6554 454433221 335555543 1 01 234556688899999831
Q ss_pred -CCEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 618 -GNTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 618 -~~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
++.+|++++...|.+|++++++++.+.+.
T Consensus 345 ~~~~iR~s~~~~~t~~did~~~~~l~~~~~ 374 (382)
T TIGR03403 345 AHTAIRLSLSRFTTEEEIDYTIEVFKKAVQ 374 (382)
T ss_pred hCeeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 25799999999999999999999876543
No 334
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.70 E-value=3.1e-15 Score=168.56 Aligned_cols=299 Identities=16% Similarity=0.182 Sum_probs=189.7
Q ss_pred cHHHHHHHHHHHhhcCCCC--CeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCcc
Q psy8199 296 HKPVIKLSEKLSSLTQYKL--GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 373 (965)
Q Consensus 296 ~~~~~~la~~l~~~~~~~~--~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~ 373 (965)
.+..+++.+.++++++... +.+++++|||+|++.++..... +++++++...++++.....
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~--------~~~~vlv~~~~~~~~~~~~---------- 95 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP--------KDGKLLVVINGAYGARIVQ---------- 95 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC--------CCCeEEEEeCChhhHHHHH----------
Confidence 3445677888899887543 3689999999999999876532 4456666666676652110
Q ss_pred chhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy8199 374 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 453 (965)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~ 453 (965)
........+..++.+.... .|++++++++.+++ ++..|.+-- +.+++|.+.| +++|.++|+
T Consensus 96 -~a~~~g~~~~~v~~~~~~~------------~d~~~l~~~l~~~~-~~~~v~~~~-~~~~tG~~~~----i~~I~~l~~ 156 (363)
T TIGR02326 96 -IAEYLGIPHHVVDTGEVEP------------PDVVEVEAILAADP-AITHIALVH-CETTTGILNP----IEAVAKLAH 156 (363)
T ss_pred -HHHHcCCceEEEeCCCCCC------------CCHHHHHHHHhhCC-CccEEEEEe-ecCCccccCc----HHHHHHHHH
Confidence 0011122344555432111 36788888887543 333344433 4778999887 899999999
Q ss_pred hcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccceeeeecHHHHHhhhccCCccccc--------
Q psy8199 454 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL-------- 523 (965)
Q Consensus 454 ~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~-------- 523 (965)
+||+++|+|.+|+ +|.. .+.... ..+|+++ ++|++.|+ ..+|+++++++.++.+... ..++.
T Consensus 157 ~~g~~livD~~~~-~g~~--~~~~~~--~~~D~~~~s~~K~l~~p-~G~G~l~~~~~~~~~~~~~--~~~~~~~~~~~~~ 228 (363)
T TIGR02326 157 RHGKVTIVDAMSS-FGGI--PIDIAE--LHIDYLISSANKCIQGV-PGFGFVIARQAELAACKGN--ARSLSLDLYDQWR 228 (363)
T ss_pred HcCCEEEEEcccc-ccCc--ccchhh--cCccEEEecCccccccC-CcceEEEECHHHHHHhhcC--CCceeecHHHHHH
Confidence 9999999999885 6532 222332 3468775 57988775 3679999998877654321 01000
Q ss_pred ------ccCCCCCCHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHHcccCCCceeee-eceeEEEEEEEeecC
Q psy8199 524 ------HSHSYSGNPLACCAALATLEIFNKD----NILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIED 592 (965)
Q Consensus 524 ------~~~t~~~~~~~~aaa~a~L~~~~~~----~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-~g~G~~~~i~~~~~~ 592 (965)
....|+.++.++.+..++|+.+.++ +..++..++.+++++.|+++ ....+..- ...+.+..+.+. ..
T Consensus 229 ~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~ 306 (363)
T TIGR02326 229 CMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSP-ED 306 (363)
T ss_pred HHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECC-CC
Confidence 0123456777888888888776443 35567778888888888765 11111110 012333444443 11
Q ss_pred ccchhhHHHHHHHHHHHcCcEEeec----CCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 593 PEQIETFSKKFFVAALKNELLLRPI----GNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 593 ~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
. ......+.+.|.++||.+.++ .+.+|+++....+.++++.+++++.+.
T Consensus 307 ~---~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~ 359 (363)
T TIGR02326 307 P---DYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKA 359 (363)
T ss_pred C---CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 0 001335778889999999875 368999976668999999999988764
No 335
>PRK02948 cysteine desulfurase; Provisional
Probab=99.70 E-value=1.7e-15 Score=171.97 Aligned_cols=330 Identities=13% Similarity=0.077 Sum_probs=202.7
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhccccccCC-----CCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN-----LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEV 329 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~-----~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~ 329 (965)
.|||..+. |..++.+++|+.+.+.......... ......+++.+.++++++...+.|+|++|+++|+..
T Consensus 2 ~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~ 75 (381)
T PRK02948 2 IYLDYAAT------TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYL 75 (381)
T ss_pred EeccCCCC------CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHH
Confidence 47887654 3368999999988776421110011 122445677888999987677899999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
++..+.... . .+++.|++.. ..|.+........ ......+..+|.... +. .|++
T Consensus 76 ~~~~~~~~~---~-~~g~~vv~~~-~~h~s~~~~~~~~---------~~~g~~v~~v~~~~~-~~-----------~d~~ 129 (381)
T PRK02948 76 AIQSLLNAL---P-QNKKHIITTP-MEHASIHSYFQSL---------ESQGYTVTEIPVDKS-GL-----------IRLV 129 (381)
T ss_pred HHHHHHHhc---c-CCCCEEEECC-cccHHHHHHHHHH---------HhCCCEEEEEeeCCC-CC-----------CCHH
Confidence 988765310 0 1345555544 4444322211110 001112333443211 11 3788
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee--
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL-- 487 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv-- 487 (965)
+|++.+. +++..|+++. +++++|.+.+ +++|.++|+++|+++|+|++++ ||... ...+.+ ..|++
T Consensus 130 ~l~~~l~---~~~~lv~~~~-~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~--~~~~~~--~~d~~~~ 196 (381)
T PRK02948 130 DLERAIT---PDTVLASIQH-ANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP--IDVFEM--GIDSLSV 196 (381)
T ss_pred HHHHhcC---CCCEEEEEEC-CcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc--cCcccC--CCCEEEe
Confidence 8888875 2456677776 6999999987 8899999999999999998885 76432 222223 36776
Q ss_pred eeccccCCCcccceeeeecHHH-HHhhhccCC-cccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHH
Q psy8199 488 CLSKGITGGYLPLSLVMTTDKI-YNSIYYKNN-INIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITK 563 (965)
Q Consensus 488 t~sK~l~gG~~pig~v~~~~~i-~~~~~~~~~-~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~~ 563 (965)
+++|.++. ..+|++++++++ +..+..++. ...+ ..++.|.++++++.++|+.+.+ ++..++++++.+++.+
T Consensus 197 s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~~~~~~~---~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~ 271 (381)
T PRK02948 197 SAHKIYGP--KGVGAVYINPQVRWKPVFPGTTHEKGF---RPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLE 271 (381)
T ss_pred cHHhcCCC--CcEEEEEEcCCCCCCCcccCCCCCCCc---CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46796542 347888887764 211111000 0011 2235678888888899886532 3456778888888888
Q ss_pred HHHcccCCCceeeeec-----eeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec---------------------
Q psy8199 564 ALTSLITHPKIINFRQ-----KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------------------- 617 (965)
Q Consensus 564 ~L~~l~~~~~i~~v~g-----~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------------------- 617 (965)
.|+++ ... +. ..+ ...+..+.+. . .. ...+...|.++||.++.+
T Consensus 272 ~L~~~-~~~-v~-~~~~~~~~~~~i~~~~~~--~----~~-~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~ 341 (381)
T PRK02948 272 QIQTL-PLP-IE-VEGHSTSCLPHIIGVTIK--G----IE-GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTY 341 (381)
T ss_pred HHhcC-CCC-EE-EeCCCccCcCCEEEEEeC--C----CC-HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCCh
Confidence 88765 111 11 111 1123333332 1 01 234566778899999741
Q ss_pred ---CCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 618 ---GNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 618 ---~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
++++|+++...++++|++.+++.+.+.
T Consensus 342 ~~~~~~lRis~~~~~t~~di~~l~~~l~~~ 371 (381)
T PRK02948 342 EEAKQFVRFSFGQQTTKDQIDTTIHALETI 371 (381)
T ss_pred HHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 258999999999999999999988754
No 336
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.70 E-value=3.9e-15 Score=170.03 Aligned_cols=339 Identities=15% Similarity=0.136 Sum_probs=199.9
Q ss_pred CCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCC------CCcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 252 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN------LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 252 dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~------~~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
++..|||..+ +|-.++.+.+|+.+.++........+ .......++ +++ ++++...++++|++|+|+
T Consensus 26 ~~~iyld~~a------~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~ 97 (406)
T TIGR01814 26 NAVIYLDGNS------LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTI 97 (406)
T ss_pred CCcEEecCCC------cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchH
Confidence 3457888544 33357888999988776532111000 111222233 334 777767789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCe----eEecCCCCCCCCCCCChh
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKT----YIITTPDSRNINKGNSAN 401 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 401 (965)
++..+++.... .+ .++..|++.+..| .+....+.... ......+ ..++... .+.
T Consensus 98 ~l~~~~~~~~~----~~-~~~~~i~~~~~~~-~s~~~~~~~~~--------~~~g~~~~~~~~~~~~~~-~g~------- 155 (406)
T TIGR01814 98 NLHLLLASFYK----PT-PKRYKILLEAKAF-PSDHYAIESQL--------QLHGLTVEESMVQIEPRE-EET------- 155 (406)
T ss_pred HHHHHHHHhcC----Cc-CCccEEEecCCCC-ChHHHHHHHHH--------HhcCCCcccceEEeccCC-CCc-------
Confidence 99998876521 01 1123455544454 43222111000 0000011 1222211 010
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccC
Q psy8199 402 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 481 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 481 (965)
.+++++++.++...+++++|+++. +++.+|.+.| +++|.++|+++|+++++|++|+ +|.. .+..+.+
T Consensus 156 ----~~~~~l~~~~~~~~~~t~lv~~~~-v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~--~id~~~~- 222 (406)
T TIGR01814 156 ----LRLEDILDTIEKNGDDIAVILLSG-VQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV--PLDLHDW- 222 (406)
T ss_pred ----cCHHHHHHHHHhcCCCeEEEEEec-cccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc--ccccccC-
Confidence 256777777765456788999999 8999999998 9999999999999999999997 5533 2233333
Q ss_pred CCcceeee--ccccCCCcccceeeeecHHHHHhhhcc--C---Cccc--ccccCC----------CCCCHHHHHHHHHHH
Q psy8199 482 IWPDFLCL--SKGITGGYLPLSLVMTTDKIYNSIYYK--N---NINI--FLHSHS----------YSGNPLACCAALATL 542 (965)
Q Consensus 482 ~~pDivt~--sK~l~gG~~pig~v~~~~~i~~~~~~~--~---~~~~--~~~~~t----------~~~~~~~~aaa~a~L 542 (965)
.+|++++ .|.|.||. . |+++.+++....+... + .... +....+ .+.|..++++..++|
T Consensus 223 -gvD~~~~s~hK~l~g~p-G-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al 299 (406)
T TIGR01814 223 -GVDFACWCTYKYLNAGP-G-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSL 299 (406)
T ss_pred -CCCEEEEcCccccCCCC-C-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHH
Confidence 4677765 58887763 3 4444444333222110 0 0000 000001 123556788888899
Q ss_pred HHHhc---ccHHHHHHHHHHHHHHHHHcccC-CCceeee-----eceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcE
Q psy8199 543 EIFNK---DNILQRISQDMKKITKALTSLIT-HPKIINF-----RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELL 613 (965)
Q Consensus 543 ~~~~~---~~~~~~~~~~~~~l~~~L~~l~~-~~~i~~v-----~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 613 (965)
+.+.+ +...++.+.+.+++++.|+++.. .+++..+ ...+.++.+.+. .+ ...+.+.|.++||+
T Consensus 300 ~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~-------~~~~~~~L~~~gi~ 371 (406)
T TIGR01814 300 DIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP-------GKAVFQALIKRGVI 371 (406)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC-------HHHHHHHHHHCCEE
Confidence 98855 34566777777778777765411 2233211 123455666542 11 34577888899998
Q ss_pred EeecC-CEEEEeC-CcccCHHHHHHHHHhhhcc
Q psy8199 614 LRPIG-NTVYLMP-PYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 614 ~~~~~-~~lR~~p-~~~~t~~~i~~~~~~l~~~ 644 (965)
+...+ +.+|++| ++..++++++.+++++.+.
T Consensus 372 v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~ 404 (406)
T TIGR01814 372 GDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEI 404 (406)
T ss_pred EeccCCCeEEEechhccCCHHHHHHHHHHHHHH
Confidence 87543 6899999 7899999999999988653
No 337
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.70 E-value=2.5e-15 Score=171.36 Aligned_cols=328 Identities=12% Similarity=0.131 Sum_probs=196.8
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCC-------CcHHHHHHHHHHHhhcCCCCCeEEEcCChhHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-------THKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 326 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~-------~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA 326 (965)
+.|||..+.. ..++.+.+++.+.+..... ..... ..+...++.+.++++++.+.++++|++|||+|
T Consensus 4 ~~yld~aa~~------~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a 76 (402)
T TIGR02006 4 PIYLDYAATT------PVDPRVAEKMMPYLTEKFG-NPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATES 76 (402)
T ss_pred cEEeeCCcCC------CCCHHHHHHHHHHHHhcCC-CCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHH
Confidence 4689987653 2589999999887754211 11111 12345667788999998777899999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHH
Q psy8199 327 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 406 (965)
Q Consensus 327 ~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (965)
++.+++.+..... .++++|++.... |.+......... .....+..+|.... +. .
T Consensus 77 ~~~~l~~l~~~~~----~~g~~Vi~~~~~-h~s~~~~~~~~~---------~~g~~v~~v~~~~~-~~-----------~ 130 (402)
T TIGR02006 77 NNLAIKGIAHFYK----SKGNHIITSKTE-HKAVLDTCRYLE---------REGFEVTYLPPKSN-GL-----------I 130 (402)
T ss_pred HHHHHHHHHHhhc----CCCCEEEECCCc-cHHHHHHHHHHH---------hcCCEEEEEccCCC-Cc-----------C
Confidence 9999887653210 244667766654 443222211000 00113344443321 11 2
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcce
Q psy8199 407 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 486 (965)
Q Consensus 407 d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDi 486 (965)
|++++++++. +++.+|++.. +++++|.+.+ +++|.++|+++|+++|+|++|+ +|.. .++..+..+|+
T Consensus 131 d~~~l~~~l~---~~~~lv~v~~-~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~----~~~~~~~~~D~ 197 (402)
T TIGR02006 131 DLEELKAAIR---DDTILVSIMH-VNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI----PINVNELKVDL 197 (402)
T ss_pred CHHHHHHhcC---CCCEEEEEEC-CCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc----ccCccccCCCE
Confidence 6788888775 3456777777 7999999887 8999999999999999999996 5432 22233456899
Q ss_pred eeec--cccCCCcccceeeeecHHHHHhhhc---cCCc-ccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHH
Q psy8199 487 LCLS--KGITGGYLPLSLVMTTDKIYNSIYY---KNNI-NIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDM 558 (965)
Q Consensus 487 vt~s--K~l~gG~~pig~v~~~~~i~~~~~~---~~~~-~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~ 558 (965)
+++| |.++ . ..+|+++.+++....+.. ++.. +.+. ..+.+..++++..++|+.+.+ +...++.+++.
T Consensus 198 ~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~---~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~ 272 (402)
T TIGR02006 198 MSISGHKIYG-P-KGIGALYVRRKPRVRLEALIHGGGHERGMR---SGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALR 272 (402)
T ss_pred EEEehhhhcC-C-CceEEEEEccCCCCCCCceecCCCccCCcc---CCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9998 9543 2 458888888654432221 1000 0011 113355566666688877653 23456666777
Q ss_pred HHHHHHHHcccCCCceeee-----ecee-EEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee----------------
Q psy8199 559 KKITKALTSLITHPKIINF-----RQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP---------------- 616 (965)
Q Consensus 559 ~~l~~~L~~l~~~~~i~~v-----~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~---------------- 616 (965)
+++++.|+++ +++... +..+ ..+.+... + .+.+...+ +|+.++.
T Consensus 273 ~~l~~~l~~~---~~v~~~~~~~~~~p~~~~v~f~~~--~-------~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~ 338 (402)
T TIGR02006 273 DRLLNGIKSI---EEVYLNGDLEHRVPGNLNVSFNYV--E-------GESLIMAL--KDLAVSSGSACTSASLEPSYVLR 338 (402)
T ss_pred HHHHHHHhcC---CCEEEeCCccccCCCeEEEEEeCc--C-------HHHHHHhc--CCEEEechhhcCCCCCCccHHHH
Confidence 7777777654 333211 1111 12222211 1 11222222 2443321
Q ss_pred --------cCCEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 617 --------IGNTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 617 --------~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
..+.+|+++....|++|++++++.+.+...
T Consensus 339 ~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~ 376 (402)
T TIGR02006 339 ALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAID 376 (402)
T ss_pred HcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 136899999999999999999999876544
No 338
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.70 E-value=1.9e-15 Score=172.88 Aligned_cols=334 Identities=14% Similarity=0.083 Sum_probs=186.4
Q ss_pred CCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhh-cCC---C--CCeEEEcCChhHHHHHHHHHHHHHHHhcC
Q psy8199 269 GHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL-TQY---K--LGHCFYGSDGASAVEVALKMSFHYWYNKG 342 (965)
Q Consensus 269 Gh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~-~~~---~--~~~v~~~~sGseA~~~Al~~a~~~~~~~g 342 (965)
|...|+.+..+.+++.. .+|+.+.+..+.++++++.+.+. ... . .++|+.|+|+++|+..++....... .
T Consensus 111 ~~~~~~~v~e~~~~~~~-~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~-l-- 186 (527)
T PRK09275 111 GFDADEFVYELVDGIIG-DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENG-L-- 186 (527)
T ss_pred CCCCCHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhh-c--
Confidence 44545544335565533 34555667777788888755432 111 1 3489999999999999888521100 0
Q ss_pred CCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCc
Q psy8199 343 FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHNK 421 (965)
Q Consensus 343 ~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 421 (965)
-.++++|++.+|+|..+...+...+. ....+.++.. ..... .|+++|++++. ++
T Consensus 187 l~pGD~Vlv~~P~y~~Y~~~~~l~g~-----------~~~~v~v~~~~~~~f~-----------~d~~~l~~~~~---~~ 241 (527)
T PRK09275 187 LKAGDKIALMTPIFTPYLEIPELPRY-----------DLEVVHINADEENEWQ-----------YPDSELEKLRD---PS 241 (527)
T ss_pred CCCCCEEEEeCCChHHHHHHHHHcCC-----------CeEEEEeecCcccCCC-----------CCHHHHHhhcC---CC
Confidence 03678999999999887433222211 0111222211 11111 25677777664 34
Q ss_pred EEEEE-EccccccCCCcccCChHHHHHHHHHHHh--cCCeEEEeccccCCCcccccccccccCCCc-cee---eeccccC
Q psy8199 422 IAAII-IEPLVQCAGGMIMYDSIYLKLVREICNN--YNIHLIADEIAVGCGRTGKFFACEHAEIWP-DFL---CLSKGIT 494 (965)
Q Consensus 422 ~aaii-~ep~v~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tg~gr~G~~~~~~~~~~~p-Div---t~sK~l~ 494 (965)
+.+|+ ++| +|++|.+. +++.+++|.++|++ +|+++|+||+|..|.. .+... ....| .++ +|||.++
T Consensus 242 tkai~l~nP--~NPTG~v~-s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~s~--~~~~~~~~I~v~SfSK~f~ 314 (527)
T PRK09275 242 IKALFLVNP--SNPPSVAM-SDESLEKIADIVNEKRPDLMIITDDVYGTFVD--DFRSL--FAVLPYNTILVYSFSKYFG 314 (527)
T ss_pred CCEEEEeCC--cCCcCCCC-CHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--cccCH--HHhCCCCEEEEeehhhhcc
Confidence 44444 556 89999766 78889999999965 5999999999987742 21111 11123 333 6899775
Q ss_pred CCcccceeeeecHH-----HHHhhhcc--------------------------CCcccccccCCCCCCHHHHHH-HH---
Q psy8199 495 GGYLPLSLVMTTDK-----IYNSIYYK--------------------------NNINIFLHSHSYSGNPLACCA-AL--- 539 (965)
Q Consensus 495 gG~~pig~v~~~~~-----i~~~~~~~--------------------------~~~~~~~~~~t~~~~~~~~aa-a~--- 539 (965)
-.+|++|+++++++ +++.+... ...+.+...+|.+.+.+.|.+ |+
T Consensus 315 mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~ 394 (527)
T PRK09275 315 ATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSL 394 (527)
T ss_pred CcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 32299999999875 33322000 000123334566666666665 32
Q ss_pred -HHHHHHhccc----HHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCcc--chhh---------HHHHH
Q psy8199 540 -ATLEIFNKDN----ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPE--QIET---------FSKKF 603 (965)
Q Consensus 540 -a~L~~~~~~~----~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~--~~~~---------~~~~~ 603 (965)
+.|+. .+. ..+.++++.+.+.+.| .. .+...++.|.|+.+.-...-.. .... ...++
T Consensus 395 ~all~~--~~~~~~~~~~~~~~Rr~~l~~~L----g~-~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f 467 (527)
T PRK09275 395 FALLDE--EDAYKKAMKDIIRRRYKALYEGL----GL-PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDL 467 (527)
T ss_pred HHHHhC--chHHHHHHHHHHHHHHHHHHHHc----CC-CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHH
Confidence 22331 122 2333444444443333 11 1222356777666543211000 0000 12345
Q ss_pred HHHHH-HcCcEEeecC------CEEEEeCCcc-cCHHHHHHHHHhhhccccc
Q psy8199 604 FVAAL-KNELLLRPIG------NTVYLMPPYI-LNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 604 ~~~l~-~~Gi~~~~~~------~~lR~~p~~~-~t~~~i~~~~~~l~~~~~~ 647 (965)
+.+|. +.||.+.|+. +++|++ ++ .+++++.++.+++.+.+.+
T Consensus 468 ~~~Ll~e~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 468 LFRLAEETGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred HHHHHhcCCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHHHHHHHH
Confidence 45554 6799998852 579999 66 5788999999888766543
No 339
>PRK13347 coproporphyrinogen III oxidase; Provisional
Probab=99.69 E-value=9.3e-16 Score=175.49 Aligned_cols=200 Identities=13% Similarity=0.204 Sum_probs=152.2
Q ss_pred CCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH-----CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--
Q psy8199 690 GGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS-----DGATRFCMGAAWRELKDRDLDNIENMICEVKKI-- 762 (965)
Q Consensus 690 ~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~-----~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~-- 762 (965)
..|+.+|.||.+.+.......... .-.+.++++++...+ .++..++|.||.. ...+.+++.++++.+++.
T Consensus 58 PfC~~~C~yC~~~~~~~~~~~~~~-~y~~~L~~Ei~~~~~~~~~~~~v~~i~fgGGTP--s~l~~~~l~~ll~~i~~~~~ 134 (453)
T PRK13347 58 PFCRSLCWFCGCNTIITQRDAPVE-AYVAALIREIRLVAASLPQRRRVSQLHWGGGTP--TILNPDQFERLMAALRDAFD 134 (453)
T ss_pred CCccccCCCCCCcCcCccccchHH-HHHHHHHHHHHHHHHhcCCCCeEEEEEEcCccc--ccCCHHHHHHHHHHHHHhCC
Confidence 569999999998753221100000 114666666664433 2567788877743 334567777777777652
Q ss_pred -----CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEEEec-
Q psy8199 763 -----GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGIIGL- 834 (965)
Q Consensus 763 -----~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i~Gl- 834 (965)
.+.+.+++..++++.++.|+++|++++++|+|| ++++++.+++.++.++..++++.++++|+. ++..+|+|+
T Consensus 135 ~~~~~e~tie~~p~~lt~e~l~~L~~~G~~rvsiGvQS~~~~vl~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dli~GlP 214 (453)
T PRK13347 135 FAPEAEIAVEIDPRTVTAEMLQALAALGFNRASFGVQDFDPQVQKAINRIQPEEMVARAVELLRAAGFESINFDLIYGLP 214 (453)
T ss_pred CCCCceEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCHHHHHHhCCCCCHHHHHHHHHHHHhcCCCcEEEeEEEeCC
Confidence 234566888999999999999999999999999 999999999999999999999999999996 899999999
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCC-----CCCCCCCCHHHHHHHHHHHHHHCC
Q psy8199 835 SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTP-----LYGSSILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 835 ~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~-----l~~~~~~~~~~~~~~ia~~R~~lp 894 (965)
++|.+++.++++.+.+++ ++.+.++.+...|++. ......++.++.+++...+...|.
T Consensus 215 gqt~e~~~~tl~~~~~l~--p~~i~~y~l~~~p~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~ 277 (453)
T PRK13347 215 HQTVESFRETLDKVIALS--PDRIAVFGYAHVPSRRKNQRLIDEAALPDAEERLRQARAVADRLL 277 (453)
T ss_pred CCCHHHHHHHHHHHHhcC--CCEEEEeccccccchhhHHhcCCccCCcCHHHHHHHHHHHHHHHH
Confidence 699999999999999999 9999998886544421 122344677787888777777663
No 340
>PRK07908 hypothetical protein; Provisional
Probab=99.69 E-value=4e-15 Score=166.55 Aligned_cols=308 Identities=11% Similarity=0.066 Sum_probs=188.8
Q ss_pred CcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHH
Q psy8199 253 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 332 (965)
Q Consensus 253 G~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~ 332 (965)
+..++|+..+. ++++ .++.+.+++.+.+.....|.. .....++.+.++++++...+++++|+|+++|+..+++
T Consensus 21 ~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~~----~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 21 GPGLLDFAVNV--RHDT-PPEWLRERLAARLGDLAAYPS----TEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CCCeEEecCCC--CCCC-CCHHHHHHHHHHhhHhhcCCC----ccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh
Confidence 56799998763 3344 578899999988765422221 2234566677777777778899999999999988776
Q ss_pred HHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHH
Q psy8199 333 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 412 (965)
Q Consensus 333 ~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 412 (965)
. .+ +.+++..++|.++...... .| ..+..+|...... .|++++
T Consensus 94 -l---------~~-~~viv~~P~y~~~~~~~~~-~G------------~~i~~v~~~~~~~------------~d~~~l- 136 (349)
T PRK07908 94 -L---------RP-RRAAVVHPSFTEPEAALRA-AG------------IPVHRVVLDPPFR------------LDPAAV- 136 (349)
T ss_pred -c---------CC-CeEEEeCCCChHHHHHHHH-cC------------CEEEeeccCcccC------------cChhHh-
Confidence 2 13 4577788888665322111 11 1222333221110 123322
Q ss_pred HHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee---ee
Q psy8199 413 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CL 489 (965)
Q Consensus 413 ~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~ 489 (965)
.+ ...+.++++| +|++|.+.+ .++|.++|+ ++.++|+||+|..|. .+........+ .++++ +|
T Consensus 137 ---~~--~~~~i~l~np--~NPTG~~~~----~~~l~~l~~-~~~~iIvDe~y~~~~-~~~~~~l~~~~-~~~~i~i~S~ 202 (349)
T PRK07908 137 ---PD--DADLVVIGNP--TNPTSVLHP----AEQLLALRR-PGRILVVDEAFADAV-PGEPESLAGDD-LPGVLVLRSL 202 (349)
T ss_pred ---cc--CCCEEEEcCC--CCCCCCCcC----HHHHHHHHh-cCCEEEEECcchhhc-cCCcccccccc-CCCEEEEeec
Confidence 21 1224445566 899999886 346777786 478899999998762 23322221122 23544 57
Q ss_pred ccccC-CCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH--Hh-cccHHHHHHHHHHHHHHHH
Q psy8199 490 SKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI--FN-KDNILQRISQDMKKITKAL 565 (965)
Q Consensus 490 sK~l~-gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~--~~-~~~~~~~~~~~~~~l~~~L 565 (965)
||.++ .| +++|++++++++++.+... ...+..+++.++++.+.++- .. -+...++++++.+++.+.|
T Consensus 203 SK~~~l~G-lRiG~~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L 273 (349)
T PRK07908 203 TKTWSLAG-LRVGYALGAPDVLARLTRG--------RAHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGL 273 (349)
T ss_pred ccccCCcc-ceeeeeecCHHHHHHHHhc--------CCCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99886 55 8999999999998887651 12244556666655554430 00 0123455555666666666
Q ss_pred HcccCCCceeeee-ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------CCEEEEeCCcccCHHHHHHH
Q psy8199 566 TSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHM 637 (965)
Q Consensus 566 ~~l~~~~~i~~v~-g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~lR~~p~~~~t~~~i~~~ 637 (965)
+++ ++.... ..|.++++.+. + ...+.+.|.++||.+.|+ .+++|++. .++++++++
T Consensus 274 ~~~----~~~~~~p~~g~~~~~~~~--~-------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l 337 (349)
T PRK07908 274 RAV----GARVVDPAAAPFVLVRVP--D-------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVL 337 (349)
T ss_pred HhC----CcEeccCCCceEEEEECC--c-------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHH
Confidence 543 344333 45777777653 1 245777888999999873 26899994 577788888
Q ss_pred HHhhhc
Q psy8199 638 TSAIFQ 643 (965)
Q Consensus 638 ~~~l~~ 643 (965)
++++..
T Consensus 338 ~~al~~ 343 (349)
T PRK07908 338 VQALAE 343 (349)
T ss_pred HHHHHH
Confidence 887764
No 341
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.69 E-value=6.8e-15 Score=166.94 Aligned_cols=330 Identities=15% Similarity=0.142 Sum_probs=201.5
Q ss_pred cccccccchhccCCCCCHHHHHHHHHHHhhcc-ccccCCCC-----cHHHHHHHHHHHhhcCCCC-CeEEEcCChhHHHH
Q psy8199 256 YLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLT-----HKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVE 328 (965)
Q Consensus 256 ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~-~~~~~~~~-----~~~~~~la~~l~~~~~~~~-~~v~~~~sGseA~~ 328 (965)
|||..++. ...++.+.+++.+.++... ......+. .+...++.+.++++++... ++++|++|+++|+.
T Consensus 2 yld~a~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~ 76 (376)
T TIGR01977 2 YFDNAATT-----YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALN 76 (376)
T ss_pred CccCcccC-----CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHH
Confidence 67765431 1146789999988877642 11111122 2556788889999987543 48999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.++.... .++++|++....|++......... ......+..++.... + ..|+
T Consensus 77 ~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~-~-----------~~d~ 127 (376)
T TIGR01977 77 IALKGLL--------KEGDHVITTPMEHNSVARPLECLK---------EQIGVEITIVKCDNE-G-----------LISP 127 (376)
T ss_pred HHHHhcc--------CCCCEEEECcchhhHHHHHHHHHH---------HHcCcEEEEEecCCC-C-----------CcCH
Confidence 8887532 256778887766544311000000 000112333333211 1 1367
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceee
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC 488 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt 488 (965)
+++++++. +++.+|++.. +++++|.+.+ +++|.++|+++|+++|+|++++ +|... +..+ ...+|+++
T Consensus 128 ~~l~~~~~---~~~~~v~~~~-~~n~tG~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~--~~~~--~~~~D~~~ 194 (376)
T TIGR01977 128 ERIKRAIK---TNTKLIVVSH-ASNVTGTILP----IEEIGELAQENGIFFILDAAQT-AGVIP--IDMT--ELAIDMLA 194 (376)
T ss_pred HHHHHhcC---CCCeEEEEEC-CCCCccccCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC--CCch--hcCCCEEE
Confidence 88888874 3456666666 6899999887 8899999999999999999996 55331 1122 23478886
Q ss_pred ec--cccCCCcccceeeeecHHH-HHhhhccCCc-cc--cc------c-cCCCCCCHHHHHHHHHHHHHHhcc---cHHH
Q psy8199 489 LS--KGITGGYLPLSLVMTTDKI-YNSIYYKNNI-NI--FL------H-SHSYSGNPLACCAALATLEIFNKD---NILQ 552 (965)
Q Consensus 489 ~s--K~l~gG~~pig~v~~~~~i-~~~~~~~~~~-~~--~~------~-~~t~~~~~~~~aaa~a~L~~~~~~---~~~~ 552 (965)
+| |.++|. ...|+++.+++. +..+..++.. .. +. . ....+.+..++++..++|+.+.+. .+.+
T Consensus 195 ~s~~K~l~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~ 273 (376)
T TIGR01977 195 FTGHKGLLGP-QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAK 273 (376)
T ss_pred ecccccccCC-CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 65 888763 245666665543 2222211000 00 00 0 001134566677777888877653 3567
Q ss_pred HHHHHHHHHHHHHHcccCCCceeee-----eceeEEEEEEEeecCccchhhHHHHHHHHHHHc-CcEEeec---------
Q psy8199 553 RISQDMKKITKALTSLITHPKIINF-----RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI--------- 617 (965)
Q Consensus 553 ~~~~~~~~l~~~L~~l~~~~~i~~v-----~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~--------- 617 (965)
+.+++.+++.+.|.++ +++..+ ...+.++.+.+. + . ....+.+.|.++ ||.++.+
T Consensus 274 ~~~~l~~~~~~~l~~~---~~~~~~~~~~~~~~~~~v~~~~~--~----~-~~~~~~~~L~~~~gi~v~~g~~~~~~~~~ 343 (376)
T TIGR01977 274 KECMLTEKLLNGLREI---NKVKIYGPADPANRVGVVSFTVE--G----I-DSEEVADILDEKFDIATRTGLHCAPLAHK 343 (376)
T ss_pred HHHHHHHHHHHHHhcC---CCeEEeCCCCccccCCeEEEEEC--C----C-CHHHHHHHHhccCCEEEEcccccchHHHH
Confidence 7778888888888654 333211 113456666553 1 1 134677888877 8887542
Q ss_pred ------CCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 618 ------GNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 618 ------~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
.+.+|+++...+|+++++.+++++.+
T Consensus 344 ~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 344 TIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 26899999999999999999998764
No 342
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.69 E-value=3.1e-15 Score=156.15 Aligned_cols=333 Identities=13% Similarity=0.113 Sum_probs=200.8
Q ss_pred ccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHH
Q psy8199 257 LDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFH 336 (965)
Q Consensus 257 lD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~ 336 (965)
+||.|.++. | .+|++.+|+.++-... ...++..+...++.++++++++ ...++|++|||.||..||....+
T Consensus 2 ~~f~SDn~~---g-~~~~m~eam~~a~~~~---~~~YG~D~~~~~~e~~~ae~~g--~~a~~Fv~sGT~aN~lal~~~~~ 72 (342)
T COG2008 2 IDFRSDNVA---G-PTPEMREALAAANAVG---DDVYGEDPTTNALEQRIAELFG--KEAALFVPSGTQANQLALAAHCQ 72 (342)
T ss_pred CccccCccC---C-CCHHHHHHHHhccccC---CCCCCCCHHHHHHHHHHHHHhC--CceEEEecCccHHHHHHHHHhcC
Confidence 577776553 2 5899999998764321 2234667888899999999995 49999999999999999997753
Q ss_pred HHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Q psy8199 337 YWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLK 416 (965)
Q Consensus 337 ~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 416 (965)
+...+| ....-|-++..+-.. .+..+...++..+..... .+++++++.+.
T Consensus 73 --------~~~~vi-~~~~aHi~~~E~Ga~-----------~~~~~~~~~~~~~g~~Gk----------lt~e~v~~~i~ 122 (342)
T COG2008 73 --------PGESVI-CHETAHIYTDECGAP-----------EFFGGGQKLPIVPGADGK----------LTPEDVEAAIR 122 (342)
T ss_pred --------CCCeEE-EeccccceecccCcH-----------HHHcCCceeccCCCCCCC----------cCHHHHHHhhc
Confidence 334444 444556654322110 011122233322211111 37888888776
Q ss_pred h---CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeecccc
Q psy8199 417 K---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGI 493 (965)
Q Consensus 417 ~---~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l 493 (965)
. +...+..++.|. -.+++|.+ +|.++|++|.++|++||+.|++|-+.-.-.-....-+...+.-.-|+++|+-.-
T Consensus 123 ~~d~~~~~~~~~~~e~-~~te~GtV-y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK 200 (342)
T COG2008 123 PDDIHHAPTPLAVLEN-TATEGGTV-YPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTK 200 (342)
T ss_pred CCCcccCCCceEEEee-ccCCCcee-cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEeccc
Confidence 4 233455555555 35566765 588889999999999999999996431000000000111122235777654333
Q ss_pred CCCcccceeee-ecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCC
Q psy8199 494 TGGYLPLSLVM-TTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHP 572 (965)
Q Consensus 494 ~gG~~pig~v~-~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~ 572 (965)
+|| +|+|+++ ++.++++.+..-. -+.|+-+.-..+-.++++..|+.---.....+..++.++|.+++++. |
T Consensus 201 ~g~-~~~gAiv~gn~~~~~~a~~~r----K~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~---~ 272 (342)
T COG2008 201 GGG-APVGAIVFGNRDFAKRARRWR----KRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAK---P 272 (342)
T ss_pred CCc-ceeeeEEEcCHHHHHHHHHHH----HHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhc---C
Confidence 344 6888765 5777776664310 13455555555555666666642100112233444477888877644 4
Q ss_pred cee-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 573 KII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 573 ~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
++. ..+.+.+++.+.+. + + ..........+...|++..+.+..+||..++..+++++++++..+..
T Consensus 273 G~~~~~~~~tN~vf~~l~--~--~-~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~ 339 (342)
T COG2008 273 GVKLAFPVETNMVFVRLP--E--S-AIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKA 339 (342)
T ss_pred CceeccCCcccEEEEECC--h--H-HHHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHH
Confidence 555 33368888888775 1 0 01122334456667777766545899999999999999999887764
No 343
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.69 E-value=5.1e-15 Score=166.55 Aligned_cols=325 Identities=10% Similarity=0.088 Sum_probs=193.0
Q ss_pred CCCCCHHHHHHHHHHHhhcccccc-C----CCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcC
Q psy8199 268 FGHSNSYINKALKNQLNKLEHVML-S----NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKG 342 (965)
Q Consensus 268 lGh~~p~v~~av~~~~~~~~~~~~-~----~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g 342 (965)
=|+..|++++++.+.-...+.... . ...++...++.+++++.++ .+++++++||++|+..++.....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~i~~~~g~t~al~~~l~~~~~------ 81 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG--MDEARVTPGAREGKFAVMHSLCE------ 81 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC--CceEEEeCCHHHHHHHHHHHhcC------
Confidence 456788888888776533221110 1 1224567899999999996 48999999999999999887632
Q ss_pred CCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC---
Q psy8199 343 FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH--- 419 (965)
Q Consensus 343 ~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--- 419 (965)
++++|++...+|.+.. .+.... ...+..++....... ..|++++++++++..
T Consensus 82 --~gd~Vl~~~~~~~~~~-~~~~~~------------g~~~~~v~~~~~~~~----------~~d~~~l~~~l~~~~~~~ 136 (361)
T cd06452 82 --KGDWVVVDGLAHYTSY-VAAERA------------GLNVREVPNTGHPEY----------HITPEGYAEVIEEVKDEF 136 (361)
T ss_pred --CCCEEEEcCCcchHHH-HHHHhc------------CCEEEEEecCCCCCc----------ccCHHHHHHHHHHHhhcc
Confidence 5577888766654431 111111 112334443211000 136788888876421
Q ss_pred -CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCC
Q psy8199 420 -NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG 496 (965)
Q Consensus 420 -~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG 496 (965)
.++.+|++.. +++++|...+ +++|.++|+++|+++|+||+|. +|.. .+....++ .|++ +++|+++++
T Consensus 137 ~~~~~lv~l~~-p~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~~~--~d~~~~s~~K~l~~~ 206 (361)
T cd06452 137 GKPPALALLTH-VDGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRM--PVSGKELG--ADFIVGSGHKSMAAS 206 (361)
T ss_pred CCCceEEEEEC-CCCCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cCCc--CCCHHHcC--CCEEEecCCccccCC
Confidence 2455666655 5888998766 8999999999999999999996 4322 12222334 3555 578999766
Q ss_pred cccceeeeecHHHHHhhhccCCc----ccccccCCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHcccCC
Q psy8199 497 YLPLSLVMTTDKIYNSIYYKNNI----NIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALTSLITH 571 (965)
Q Consensus 497 ~~pig~v~~~~~i~~~~~~~~~~----~~~~~~~t~~~~~~~~aaa~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~ 571 (965)
.++|++++++++++.+...... .....++|. ++..+++++++++.+.+ -....+..++.+++.+.|+++
T Consensus 207 -~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l--- 280 (361)
T cd06452 207 -APIGVLATTEEWADIVFRTSQMFKIKEVELLGCTL--RGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKI--- 280 (361)
T ss_pred -CCeEEEEECHHHHHHHhccccccccceeeeecccc--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 4899999999998887542110 000111221 22334455556654321 112222234456777777654
Q ss_pred Cceeee---eceeEEEEEEEeecCc-cc--hhhHHHHHHHHHHHcCcEEeecC--CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 572 PKIINF---RQKGMIWAFDVIIEDP-EQ--IETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 572 ~~i~~v---~g~G~~~~i~~~~~~~-~~--~~~~~~~~~~~l~~~Gi~~~~~~--~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+++..+ .+...++.++.. .-- .. .......+.+.|+++||.+...+ +.+|++. ...++++++.+++++++
T Consensus 281 ~g~~v~~~~~~~~n~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~~ 358 (361)
T cd06452 281 EGIKQLGEKPKNHDLMFFETP-SFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFKE 358 (361)
T ss_pred CCeEEECCCCCCCceEEEEcC-CcchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHHH
Confidence 344322 244556555532 000 00 00112257888999999965432 5788885 34799999999998764
No 344
>KOG1368|consensus
Probab=99.68 E-value=2.8e-15 Score=149.35 Aligned_cols=324 Identities=13% Similarity=0.123 Sum_probs=213.6
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 334 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a 334 (965)
+..|+-|-.-.. .-.++++||.++.-.- .-.+..+...+|.++.++++ +.+.-+|.+||+..|.+|++.-
T Consensus 22 ~~vDLRSDTvT~----PTdeMr~am~eA~vgD----dVyGeD~tt~rLE~~vA~l~--GKEAgLFv~SGTmgNllaIm~H 91 (384)
T KOG1368|consen 22 RSVDLRSDTVTV----PTDEMRRAMAEASVGD----DVYGEDPTTNRLEQRVAELF--GKEAGLFVPSGTMGNLLAIMVH 91 (384)
T ss_pred eccccccccccC----ChHHHHHHHhhcccCc----ccccCCccHHHHHHHHHHHh--CccceeeecccccccHHHHHHH
Confidence 567777654322 2356777777654221 12345667789999999999 5788999999999999999987
Q ss_pred HHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy8199 335 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 414 (965)
Q Consensus 335 ~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 414 (965)
+. .++..||+ +.--|-+.+..-..+ ...++...|..+... .+-+++++|++
T Consensus 92 c~-------~rg~eii~-gd~~HI~~~E~gg~s-----------~l~gv~~~tv~~e~d----------gtm~ledIe~~ 142 (384)
T KOG1368|consen 92 CH-------QRGSEIIV-GDRAHIHRYEQGGIS-----------QLAGVHVRTVKNEND----------GTMDLEDIEAA 142 (384)
T ss_pred hc-------CCCceEEe-ccchheeehhccChh-----------hhccceeEeeeeCCC----------CeeeHHHHHHh
Confidence 65 23444544 334455432211111 112232323211111 12478999999
Q ss_pred HHhC-----CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC-------
Q psy8199 415 LKKN-----HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI------- 482 (965)
Q Consensus 415 l~~~-----~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~------- 482 (965)
+... .+.+..|.+|. -+++.|....|-+|+.++.++|++||+.|++|-+.- | .+.-..|+
T Consensus 143 ir~~~GD~H~p~T~LIclEN-T~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~------NAavasgV~vk~i~~ 214 (384)
T KOG1368|consen 143 IRVPKGDCHMPPTKLICLEN-THNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-F------NAAVASGVPVKKICS 214 (384)
T ss_pred hcCCCCCccCCCceEEEeec-cccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-h------hHHHHcCCCHHHHHH
Confidence 9743 34578899998 677777677799999999999999999999997532 1 12222222
Q ss_pred Ccce--eeeccccCCCccccee-eeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHH
Q psy8199 483 WPDF--LCLSKGITGGYLPLSL-VMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMK 559 (965)
Q Consensus 483 ~pDi--vt~sK~l~gG~~pig~-v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~ 559 (965)
.-|- +||||+|+. |+|. +++++++++....-. -..|+.+....+-||||+.+|+. .-..+....++..
T Consensus 215 ~fDSVsiCLSKglgA---PVGSViVG~k~FI~kA~~~R----KalGGGmRQsGvLaaaaLval~~--~~~~L~~dHk~A~ 285 (384)
T KOG1368|consen 215 AFDSVSICLSKGLGA---PVGSVIVGSKDFIDKARHFR----KALGGGMRQSGVLAAAALVALDE--NVPLLRADHKRAK 285 (384)
T ss_pred hhhhhhhhhhccCCC---CcccEEEccHHHHHHHHHHH----HHhcCchhHHHHHHHHHHHHhhc--chHHHHHHHHHHH
Confidence 2343 589999976 8885 557888876443200 12456666777888888888863 3336777778888
Q ss_pred HHHHHHHcccCCCcee-eee-ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC-CEEEEeCCcccCHHHHHH
Q psy8199 560 KITKALTSLITHPKII-NFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQH 636 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~-~v~-g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~ 636 (965)
.|.+.++.. +.+. .|. .+..|..+++. .. .-.++.+++.+.+.|+++.+.. ..+|+..+..+++++++.
T Consensus 286 ~lAe~~~~~---~~i~v~v~a~etNiv~~~l~-q~----~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~ 357 (384)
T KOG1368|consen 286 ELAEYINTP---EEIRVEVPAVETNIVNMVLC-QA----RLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEY 357 (384)
T ss_pred HHHHHhccc---cceeeecchhhcceeeeecc-cc----cCCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHH
Confidence 888877654 2233 444 56778777764 11 1124578889999999988754 579999889999999998
Q ss_pred HHHhhh
Q psy8199 637 MTSAIF 642 (965)
Q Consensus 637 ~~~~l~ 642 (965)
+...+.
T Consensus 358 ~~~~~~ 363 (384)
T KOG1368|consen 358 VKSVLS 363 (384)
T ss_pred HHHHHH
Confidence 887774
No 345
>PRK09249 coproporphyrinogen III oxidase; Provisional
Probab=99.68 E-value=1.6e-15 Score=173.80 Aligned_cols=200 Identities=12% Similarity=0.190 Sum_probs=154.5
Q ss_pred CCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH-----CCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--
Q psy8199 690 GGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS-----DGATRFCMGAAWRELKDRDLDNIENMICEVKKI-- 762 (965)
Q Consensus 690 ~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~-----~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~-- 762 (965)
..|+.+|.||.+........ .......+.++++++...+ .++..+.|.||... ..+.+.+.++++.+++.
T Consensus 57 PFC~~~C~yC~~~~~~~~~~-~~~~~y~~~L~~Ei~~~~~~~~~~~~v~~i~~gGGtPs--~l~~~~l~~ll~~l~~~~~ 133 (453)
T PRK09249 57 PFCRSLCYYCGCNKIITRDH-EKADPYLDALEKEIALVAALLGPGRPVSQLHWGGGTPT--FLSPEQLRRLMALLREHFN 133 (453)
T ss_pred CCccccCCCCCCcccCCCCc-chHHHHHHHHHHHHHHHHHHhCCCCceEEEEECCcccc--cCCHHHHHHHHHHHHHhCC
Confidence 66999999999875422111 1111234667777764433 35778888777433 34567777777777652
Q ss_pred ---C--cEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCC-ceeeeEEEec-
Q psy8199 763 ---G--LETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGI-NICCGGIIGL- 834 (965)
Q Consensus 763 ---~--~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi-~v~~~~i~Gl- 834 (965)
+ +.+.+++..++++.++.|+++|++++++|+|| ++++++.+++.++.++.+++++.++++|+ .++..+|+|+
T Consensus 134 ~~~~~e~tie~np~~lt~e~l~~l~~aG~~risiGvqS~~~~~L~~l~r~~~~~~~~~ai~~l~~~G~~~v~~dli~GlP 213 (453)
T PRK09249 134 FAPDAEISIEIDPRELDLEMLDALRELGFNRLSLGVQDFDPEVQKAVNRIQPFEFTFALVEAARELGFTSINIDLIYGLP 213 (453)
T ss_pred CCCCCEEEEEecCCcCCHHHHHHHHHcCCCEEEECCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 2 34556888899999999999999999999999 99999999999999999999999999999 8999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCC-----CCCCCCCHHHHHHHHHHHHHHCC
Q psy8199 835 SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPL-----YGSSILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 835 ~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l-----~~~~~~~~~~~~~~ia~~R~~lp 894 (965)
++|.+++.++++.+.+++ ++.+.++.+.+.|++.. .....++.++..+++..+...+.
T Consensus 214 gqt~e~~~~~l~~~~~l~--~~~i~~y~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 276 (453)
T PRK09249 214 KQTPESFARTLEKVLELR--PDRLAVFNYAHVPWLFKAQRKIDEADLPSPEEKLAILQQTIETLT 276 (453)
T ss_pred CCCHHHHHHHHHHHHhcC--CCEEEEccCccchhhhhHhcCCCcccCCCHHHHHHHHHHHHHHHH
Confidence 799999999999999999 99999999886555421 12234577888888877776663
No 346
>PLN02951 Molybderin biosynthesis protein CNX2
Probab=99.68 E-value=2.4e-15 Score=166.46 Aligned_cols=203 Identities=17% Similarity=0.265 Sum_probs=156.6
Q ss_pred CCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHH
Q psy8199 676 ANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENM 755 (965)
Q Consensus 676 g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~ 755 (965)
|..+. +.-+++ |..|+.+|.||....... .......++.+++.+.++.+.+.|++.|.++||+ |+...+ +.++
T Consensus 54 gr~~~-~lrisv-T~~CNlrC~yC~~~~~~~-~~~~~~~ls~eei~~~i~~~~~~Gv~~I~~tGGE-Pllr~d---l~el 126 (373)
T PLN02951 54 GRRHN-YLRISL-TERCNLRCQYCMPEEGVE-LTPKSHLLSQDEIVRLAGLFVAAGVDKIRLTGGE-PTLRKD---IEDI 126 (373)
T ss_pred CCccc-EEEEEE-cCCcCcCCCCCCCCcCCC-CCCccccCCHHHHHHHHHHHHHCCCCEEEEECCC-Ccchhh---HHHH
Confidence 44443 334677 999999999997542111 1112345899999999999999999999998765 655543 5566
Q ss_pred HHHHHhc-CcE-eE-EecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCC-ceeeeE
Q psy8199 756 ICEVKKI-GLE-TC-LTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGI-NICCGG 830 (965)
Q Consensus 756 ~~~i~~~-~~~-i~-~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi-~v~~~~ 830 (965)
++.+++. ++. +. +++|.+..+.++.|+++|++++++++++ +++.|+.+.+...+++++++++.++++|+ ++...+
T Consensus 127 i~~l~~~~gi~~i~itTNG~lL~~~~~~L~~aGld~VnISLDsl~~e~~~~itr~~~~~~vl~~I~~a~~~G~~~vkin~ 206 (373)
T PLN02951 127 CLQLSSLKGLKTLAMTTNGITLSRKLPRLKEAGLTSLNISLDTLVPAKFEFLTRRKGHDRVLESIDTAIELGYNPVKVNC 206 (373)
T ss_pred HHHHHhcCCCceEEEeeCcchHHHHHHHHHhCCCCeEEEeeccCCHHHHHHHhcCCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 6666653 543 43 3567666778999999999999999999 89999999987889999999999999998 577776
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHH
Q psy8199 831 IIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAV 888 (965)
Q Consensus 831 i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~ 888 (965)
++-.|.+.+++.+.++++++.+ ..+.+..|+|+.++++......+..++++.+..
T Consensus 207 vv~~g~N~~Ei~~li~~a~~~g---i~vr~ie~mP~~~~~~~~~~~~~~~ei~~~l~~ 261 (373)
T PLN02951 207 VVMRGFNDDEICDFVELTRDKP---INVRFIEFMPFDGNVWNVKKLVPYAEMMDRIEQ 261 (373)
T ss_pred EecCCCCHHHHHHHHHHHHhCC---CeEEEEEcccCCCCccccccCCCHHHHHHHHHH
Confidence 6655789999999999999987 457888899999997766556677777777654
No 347
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.68 E-value=2.1e-14 Score=160.56 Aligned_cols=323 Identities=15% Similarity=0.160 Sum_probs=192.4
Q ss_pred cccccccccchhccCCCC--CHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHS--NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 331 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~--~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al 331 (965)
+.+|+....+ .+||-+ ++++++|+.+.++.+ ....+...+++++++++++ .+++++++||++|+.+++
T Consensus 8 ~~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~------~~~~~~~~~~~~~~a~~~g--~~~~~~~~g~t~al~~al 77 (363)
T TIGR01437 8 KKVINASGKM--TILGVSTVSDEVADAQKRGAQNY------FEIKELVNKTGEYIANLLG--VEDAVIVSSASAGIAQSV 77 (363)
T ss_pred ceEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHhhC--CCeEEEEcCHHHHHHHHH
Confidence 3456654433 678866 899999999987653 1346778889999999985 568999999999999999
Q ss_pred HHHHHHHHhcCC-----------CCceEEEEEcCCccCCc--c-ccccccCCcCccchhcccCCCeeEecCCCCCCCCCC
Q psy8199 332 KMSFHYWYNKGF-----------LNKKKFICLQNSYHGET--L-GALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKG 397 (965)
Q Consensus 332 ~~a~~~~~~~g~-----------~~~~~vi~~~~~yHg~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (965)
+.+..- |. -.++.||+..+.|..+. . .++..+| ...++++... .
T Consensus 78 ~al~~~----Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g------------~~~v~v~~~~---~--- 135 (363)
T TIGR01437 78 AAVITR----GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGG------------GKVVEAGYAN---E--- 135 (363)
T ss_pred HHHhcC----CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcC------------CeEEEEcCCC---C---
Confidence 977430 10 01236777665554331 0 1111111 0122222210 1
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCcEEEEE-EccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccc
Q psy8199 398 NSANEIARCAIFDLEILLKKNHNKIAAII-IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA 476 (965)
Q Consensus 398 ~~~~~~~~~d~~~le~~l~~~~~~~aaii-~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~ 476 (965)
.|++++++++.+ ++++++ +++ ..+.+|.+.+ +++|.++|++||+++|+|++|. . ... .
T Consensus 136 --------~d~~~le~ai~~---~t~ai~~v~~-~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~~~--~ 194 (363)
T TIGR01437 136 --------CSAEQLEAAITE---KTAAILYIKS-HHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--DLQ--K 194 (363)
T ss_pred --------CCHHHHHHhcCh---hceEEEEEec-CCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--chH--H
Confidence 368899998863 334444 444 3567787776 8899999999999999999996 2 111 1
Q ss_pred ccccCCCcceeeec--cccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHH
Q psy8199 477 CEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQ 552 (965)
Q Consensus 477 ~~~~~~~pDivt~s--K~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~ 552 (965)
...+| .|++++| |.++| +..|++++++++++.+.... .. .+..+.....++++..++++.+.+ .+..+
T Consensus 195 ~~~~g--~D~~~~S~~K~l~g--p~~G~l~~~~~~i~~~~~~~--~~--~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~ 266 (363)
T TIGR01437 195 YYRLG--ADLVIYSGAKAIEG--PTSGLVLGKKKYIEWVKLQS--KG--IGRAMKVGKENILGLTAALEQYLSTGKESGA 266 (363)
T ss_pred HHHcC--CCEEEEeCCcccCC--CceEEEEEcHHHHHHHHhcc--CC--CcceeccCHHHHHHHHHHHHHHHccCcccHH
Confidence 11123 5888764 88876 46888888888877653210 00 001111112334455556655432 23444
Q ss_pred HHHHHHHHHHHHHHcccCCCceeee---eceeE---EEEEEEeecCccchhhHHHHHHHHHHHcC--cEEee---cCCEE
Q psy8199 553 RISQDMKKITKALTSLITHPKIINF---RQKGM---IWAFDVIIEDPEQIETFSKKFFVAALKNE--LLLRP---IGNTV 621 (965)
Q Consensus 553 ~~~~~~~~l~~~L~~l~~~~~i~~v---~g~G~---~~~i~~~~~~~~~~~~~~~~~~~~l~~~G--i~~~~---~~~~l 621 (965)
...++.+++.++|.++ |++... ...+. ...+.+. ... ..-....+.+.|.++| |.+++ ..+.+
T Consensus 267 ~~~~~~~~l~~~L~~i---~g~~~~~~~~~~~~~~~~~~v~~~-~~~--~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~ 340 (363)
T TIGR01437 267 EMVAKLTPFIEALNTL---KGVSASIVQDEAGRDIARAEIRFD-ESE--LGMTAADVVQALRQGEPAIYTRGYKANEGII 340 (363)
T ss_pred HHHHHHHHHHHHHhcC---CCeEEEEecCCCCCcCceEEEEEe-ccC--CCCCHHHHHHHHhcCCCCEEEeeeeecCCeE
Confidence 4455566777777765 444322 11111 1222232 100 0112456778888777 77774 23689
Q ss_pred EEeCCcccCHHHHHHHHHhhhcc
Q psy8199 622 YLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 622 R~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
++.|+ +.+++|++.+++++.+.
T Consensus 341 ~l~~~-~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 341 EIDPR-SVTGGQLDIIVERIREI 362 (363)
T ss_pred EEEee-cCCHHHHHHHHHHHHHh
Confidence 99988 46799999999988653
No 348
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.68 E-value=1.2e-14 Score=165.11 Aligned_cols=329 Identities=13% Similarity=0.062 Sum_probs=192.8
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHH-hhcccc-ccCCC--CcHHHHHHHH----HHHhhcCCCCCeE-EEcCChhH
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQL-NKLEHV-MLSNL--THKPVIKLSE----KLSSLTQYKLGHC-FYGSDGAS 325 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~-~~~~~~-~~~~~--~~~~~~~la~----~l~~~~~~~~~~v-~~~~sGse 325 (965)
+.|.+.++- +. -||.+.+|+..++ ...+.. ..+.. .++...+|.+ +++++++ .+.+ ++++||+.
T Consensus 29 ~~~~l~~se--n~---~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g--~~~alv~~~SG~~ 101 (416)
T PRK13034 29 DHLELIASE--NF---TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG--CDYANVQPHSGSQ 101 (416)
T ss_pred cCeeecccc--cC---CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC--CCceEEecCCcHH
Confidence 455555442 22 3899999999885 554221 11111 2577788887 9999985 4567 45799999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|+.+++.... .++++|++.+.+|.+... .+..+.+.. ... .......... ...
T Consensus 102 A~~~~l~al~--------~~GD~Vl~~~~~~~~~~~----~g~~~~~~~---~~~-~~~~~~~~~~-----------~~~ 154 (416)
T PRK13034 102 ANGAVYLALL--------KPGDTILGMSLSHGGHLT----HGAKVSLSG---KWY-NAVQYGVDRL-----------TGL 154 (416)
T ss_pred HHHHHHHHhc--------CCCCEEEEcCccceeeee----cCCcceecc---cee-eeEEcccccc-----------cCC
Confidence 9999998763 366788887766544111 111110000 000 0011111000 001
Q ss_pred HHHHHHHHHHHhCCCcEEEEEE-ccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIII-EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 484 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~-ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 484 (965)
.|++++++++... +..+|++ ++ +. |...+ +++|.++|++||+++|+|++|+ +|-.+........+ ..
T Consensus 155 ~d~~~le~~l~~~--~~klVi~~~~-~~---g~~~d----l~~l~~la~~~g~~livD~Aha-~G~~~~g~~~~~~~-~~ 222 (416)
T PRK13034 155 IDYDEVEELAKEH--KPKLIIAGFS-AY---PRELD----FARFREIADEVGALLMVDMAHI-AGLVAAGEHPNPFP-HA 222 (416)
T ss_pred cCHHHHHHHHhhc--CCeEEEECCC-cc---ccccC----HHHHHHHHHHcCCEEEEeCccc-ccCcccCCCCCCCC-Cc
Confidence 4778888888542 3466777 45 33 44444 8889999999999999999986 66554321111112 36
Q ss_pred cee--eeccccCCCcccceeeeecHH-HHHhhhccCCcccccccCCCC-CCHHHHH-HHHHHHHHHhc--ccHHHHHHHH
Q psy8199 485 DFL--CLSKGITGGYLPLSLVMTTDK-IYNSIYYKNNINIFLHSHSYS-GNPLACC-AALATLEIFNK--DNILQRISQD 557 (965)
Q Consensus 485 Div--t~sK~l~gG~~pig~v~~~~~-i~~~~~~~~~~~~~~~~~t~~-~~~~~~a-aa~a~L~~~~~--~~~~~~~~~~ 557 (965)
|++ +++|+++|+ .-|+++++++ +.+.+.. ....+..+ .+|...+ ++++.++.+.. .+..+++.++
T Consensus 223 Di~~~s~~K~l~g~--~GG~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~ 294 (416)
T PRK13034 223 HVVTTTTHKTLRGP--RGGMILTNDEEIAKKINS------AVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIAN 294 (416)
T ss_pred eEEEEeCcccCCCC--CCeEEEECcHHHHHHHHh------hcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHH
Confidence 776 467999764 2356666554 4333332 11111111 2233333 34445554432 2357899999
Q ss_pred HHHHHHHHHcccCCCceeeee--ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee-----------cCCEEEEe
Q psy8199 558 MKKITKALTSLITHPKIINFR--QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-----------IGNTVYLM 624 (965)
Q Consensus 558 ~~~l~~~L~~l~~~~~i~~v~--g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~-----------~~~~lR~~ 624 (965)
.++|+++|+++ ++.... +...+..+.+. +. ......+.+.|.++||++.+ ....+|++
T Consensus 295 a~~l~~~L~~~----G~~~~~~~~~t~i~~v~~~--~~---~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~ 365 (416)
T PRK13034 295 AQALAEVLKER----GYDLVSGGTDNHLLLVDLR--PK---GLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIG 365 (416)
T ss_pred HHHHHHHHHHc----CCEeccCCCCCcEEEEEcC--CC---CCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeC
Confidence 99999999765 222221 35566666654 21 11123455778889999864 12479999
Q ss_pred CCc----ccCHHHHHHHHHhhhcccc
Q psy8199 625 PPY----ILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 625 p~~----~~t~~~i~~~~~~l~~~~~ 646 (965)
++. .+++++++++++.+.+.+.
T Consensus 366 ~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 366 TPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred cHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 888 7789999999999887654
No 349
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.67 E-value=7.7e-15 Score=165.83 Aligned_cols=323 Identities=15% Similarity=0.180 Sum_probs=211.8
Q ss_pred cccccccchhccCCCCCHHHHHHHHHHHhhccccc---cCC---CCcHHHHHHHHHHHhhcCCCC-CeEEEcCChhHHHH
Q psy8199 256 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVM---LSN---LTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVE 328 (965)
Q Consensus 256 ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~---~~~---~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGseA~~ 328 (965)
|||..+. |..++.|.+++.+.+....... ... ...+...+..+.++++++... +.++|++|+|+|++
T Consensus 2 Yld~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~ 75 (371)
T PF00266_consen 2 YLDNAGT------GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALN 75 (371)
T ss_dssp EEBTSSS-------B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHH
T ss_pred EeeCCCc------cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhh
Confidence 7776554 3478999999999877642111 111 123445678888999998777 78999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.++....... .++++|++....|++........ .......+..++.+... . .|+
T Consensus 76 ~~~~~l~~~~-----~~g~~vl~~~~~~~s~~~~~~~~---------~~~~g~~v~~i~~~~~~-~-----------~~~ 129 (371)
T PF00266_consen 76 AVASSLLNPL-----KPGDEVLVTSNEHPSNRYPWEEI---------AKRKGAEVRVIPADPGG-S-----------LDL 129 (371)
T ss_dssp HHHHHHHHHG-----TTTCEEEEEESSHHHHHHHHHHH---------HHHTTEEEEEEEEGTTS-S-----------CSH
T ss_pred hhhhcccccc-----ccccccccccccccccccccccc---------cccchhhhccccccccc-h-----------hhh
Confidence 9998774321 46788999988887763111110 00111233344432211 1 267
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceee
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC 488 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt 488 (965)
+++++.|. +++..|.+.- +.+.+|...| +++|.++|+++|+++++|-+++ +|.. ........+|+++
T Consensus 130 ~~~~~~l~---~~~~lv~~~~-~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~----~id~~~~~~D~~~ 196 (371)
T PF00266_consen 130 EDLEEALN---PDTRLVSISH-VENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCV----PIDLDELGADFLV 196 (371)
T ss_dssp HHHHHHHH---TTESEEEEES-BETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTS----S--TTTTTESEEE
T ss_pred hhhhhhhc---cccceEEeec-ccccccEEee----eceehhhhhccCCceeEechhc-cccc----cccccccccceee
Confidence 88888885 4677777777 7888999988 9999999999999999999986 6533 2223344579998
Q ss_pred ec--cccCCCcccceeeeecHHHHHhhhccCC-cc---------------cc-cccCCCCCCHHHHHHHHHHHHHHhc--
Q psy8199 489 LS--KGITGGYLPLSLVMTTDKIYNSIYYKNN-IN---------------IF-LHSHSYSGNPLACCAALATLEIFNK-- 547 (965)
Q Consensus 489 ~s--K~l~gG~~pig~v~~~~~i~~~~~~~~~-~~---------------~~-~~~~t~~~~~~~~aaa~a~L~~~~~-- 547 (965)
+| | |+|+ ..+|.++.+++..+.+..... .. .. ...+ +.+..+..+..++|+.+.+
T Consensus 197 ~s~~K-l~gp-~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G--T~~~~~~~~l~~al~~~~~~g 272 (371)
T PF00266_consen 197 FSSHK-LGGP-PGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGG--TPNVPAIYALNEALKLLEEIG 272 (371)
T ss_dssp EESTS-TTSS-STEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSS--S--HHHHHHHHHHHHHHHHHH
T ss_pred ecccc-cCCC-Cchhhheehhhhhhccccccccccccccccchhccccccccccccc--ceeeehhhhHHHHHhhhhccc
Confidence 76 8 8776 478999999988887743100 00 00 0111 2355667777788887743
Q ss_pred -ccHHHHHHHHHHHHHHHHHcccCCCcee-----eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec----
Q psy8199 548 -DNILQRISQDMKKITKALTSLITHPKII-----NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---- 617 (965)
Q Consensus 548 -~~~~~~~~~~~~~l~~~L~~l~~~~~i~-----~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---- 617 (965)
+.+.++..++.+++.+.|.++ +.+. .-...+.++.+.+. . .....+.+.|.++||.+..+
T Consensus 273 ~~~i~~~~~~l~~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~~~~--~-----~~~~~~~~~L~~~~I~~~~G~~~~ 342 (371)
T PF00266_consen 273 IERIRERIRELAEYLREALEEL---PGIEVLGPDDEPRRPSIVSFNLP--G-----SDADDVVKYLEERGIAVSTGSACA 342 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT---TTEEESSSSCGGBGTTEEEEEET--T-----SSHHHHHHHHHHHTEEEEESTTTC
T ss_pred cccchhhhhhHHHHHHhhhhcC---CceeEeeecccccccceEEEeec--C-----CCHHHHHHHHhhcCEEEeccCccc
Confidence 345677777788888887765 3322 12334666777664 1 11356778888889998862
Q ss_pred ---------CCEEEEeCCcccCHHHHHHH
Q psy8199 618 ---------GNTVYLMPPYILNKNEIQHM 637 (965)
Q Consensus 618 ---------~~~lR~~p~~~~t~~~i~~~ 637 (965)
++.+|++++...|.+|++++
T Consensus 343 ~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 343 GPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred HHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 26999999999999999874
No 350
>cd01335 Radical_SAM Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. Mechanistically, they share the transfer of a single electron from the iron-sulfur cluster to SAM, which leads to its reductive cleavage to methionine and a 5'-deoxyadenosyl radical, which, in turn, abstracts a hydrogen from the appropriately positioned carbon atom. Depending on the enzyme, SAM is consumed during this process or it is restored and reused. Radical SAM enzymes catalyze steps in metabolism, DNA repair, the biosynthesis of vitamins and coenzymes, and the biosynthesis of many antibiotics. Examples are biotin synthase (BioB), lipoyl synthase (LipA), pyruvate formate-lyase (PFL), coproporphyrinogen oxidase (HemN), lysine 2,3-aminomutase (LAM), anaerobic ribonucleotide reductase (ARR), and MoaA, an enzyme o
Probab=99.67 E-value=4.4e-15 Score=152.50 Aligned_cols=191 Identities=25% Similarity=0.437 Sum_probs=147.1
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhc--CcEe
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLET 766 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~--~~~i 766 (965)
|++|+++|.||......... .......+++.+.+......+...+.+++|+ ++... .+.++++.+++. +..+
T Consensus 4 ~~~C~~~C~fC~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~gge-p~~~~---~~~~~i~~~~~~~~~~~~ 77 (204)
T cd01335 4 TRGCNLNCGFCSNPASKGRG--PESPPEIEEILDIVLEAKERGVEVVILTGGE-PLLYP---ELAELLRRLKKELPGFEI 77 (204)
T ss_pred CCccCCcCCCCCCCCCCCCC--ccccccHHHHHHHHHHHHhcCceEEEEeCCc-CCccH---hHHHHHHHHHhhCCCceE
Confidence 89999999999987643322 1111122466667777777788888886654 53332 778888888875 5554
Q ss_pred --EEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhccc-CCCCHHHHHHHHHHHHHcCCceeeeEEEecC-CCHHHH
Q psy8199 767 --CLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDII-STRDYENRLNTLKNVRNVGINICCGGIIGLS-ESRDQR 841 (965)
Q Consensus 767 --~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~-~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~-et~ed~ 841 (965)
.++...++++.++.|+++|+..+.+++|+ ++..++.++ +..++++++++++.+++.|+.+.+.+++|++ ++.+++
T Consensus 78 ~i~T~~~~~~~~~~~~l~~~g~~~i~i~le~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~~~~~ 157 (204)
T cd01335 78 SIETNGTLLTEELLKELKELGLDGVGVSLDSGDEEVADKIRGSGESFKERLEALKELREAGLGLSTTLLVGLGDEDEEDD 157 (204)
T ss_pred EEEcCcccCCHHHHHHHHhCCCceEEEEcccCCHHHHHHHhcCCcCHHHHHHHHHHHHHcCCCceEEEEEecCCChhHHH
Confidence 44555558999999999999999999999 899999998 7889999999999999999999999999996 666999
Q ss_pred HHHHHHHHhcCCCCCceeeccccccCCCCCC-CCCCCCHHHHHHHH
Q psy8199 842 AELIFQLANLNPYPESVPINNLVQIKGTPLY-GSSILDPLEFIRTI 886 (965)
Q Consensus 842 ~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~-~~~~~~~~~~~~~i 886 (965)
.++++.+.+... +..+.+++|.|.|||+++ ..+..+.....+++
T Consensus 158 ~~~~~~l~~~~~-~~~~~~~~~~p~~~t~~~~~~~~~~~~~~~~~~ 202 (204)
T cd01335 158 LEELELLAEFRS-PDRVSLFRLLPEEGTPLELAAPVVPAEKLLRLI 202 (204)
T ss_pred HHHHHHHHhhcC-cchhhhhhhcccCCCeeeeccccccHHHHHHHh
Confidence 999999998752 678999999999999998 23334444444443
No 351
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.66 E-value=5.3e-15 Score=168.92 Aligned_cols=339 Identities=12% Similarity=0.071 Sum_probs=181.0
Q ss_pred CCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHH-HHHhhcC---CCCC--eEEEcCChhHHHHHHHHHHHHHHHhc
Q psy8199 268 FGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSE-KLSSLTQ---YKLG--HCFYGSDGASAVEVALKMSFHYWYNK 341 (965)
Q Consensus 268 lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~-~l~~~~~---~~~~--~v~~~~sGseA~~~Al~~a~~~~~~~ 341 (965)
.|...|+++.++.+.+... +|..+.+..+..+++++ .+.+..+ ...+ +|+.|+||++|+..++....... .
T Consensus 104 p~~~~~~~~~~~~~~~~~~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~--l 180 (521)
T TIGR03801 104 LGFDPDAFLYEMCDGIIGD-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANE--L 180 (521)
T ss_pred CCCCCCHHHHHHHHHhhcC-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhh--c
Confidence 4555677777777765322 33333444555666664 3343322 1223 89999999999999887521100 0
Q ss_pred CCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCc
Q psy8199 342 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNK 421 (965)
Q Consensus 342 g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 421 (965)
. .++++|++.+++|..+...+...+. ...++.++...... ++ ...|. .|.+++++++. ++
T Consensus 181 l-~pGD~Vlv~~P~y~~y~~~~~l~~~-----------g~~vv~i~~~~~~~--~g--~~~~~-~d~~~l~~~~~---~~ 240 (521)
T TIGR03801 181 L-KKGDKIALMTPIFTPYLEIPELPRY-----------DFEVVRIKADEMTE--DG--THTWQ-YPDKELEKLRD---PS 240 (521)
T ss_pred C-CCCCEEEEeCCCcHHHHHHHHHhcC-----------CcEEEEeecccccc--cc--cccCC-CCHHHHHHhcC---CC
Confidence 0 3678999999999887332211110 11222233211000 00 00011 25677776653 34
Q ss_pred EEE-EEEccccccCCCcccCChHHHHHHHHHHHhc--CCeEEEeccccCCCcccccccccccCCCc-cee---eeccccC
Q psy8199 422 IAA-IIIEPLVQCAGGMIMYDSIYLKLVREICNNY--NIHLIADEIAVGCGRTGKFFACEHAEIWP-DFL---CLSKGIT 494 (965)
Q Consensus 422 ~aa-ii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tg~gr~G~~~~~~~~~~~p-Div---t~sK~l~ 494 (965)
+.+ ++++| +|++|.+. +++.+++|.++|++| ++++|+||+|..|.. .+.+. ....| .++ +|||.++
T Consensus 241 ~kai~l~nP--~NPTG~vl-s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~sl--~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 241 IKALFVVNP--SNPPSVAM-SDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFRSL--FAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred CcEEEEeCC--CCCCCCCC-CHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--cccch--hhhCCCCEEEEEcchhhcc
Confidence 444 45666 89999876 788899999999987 999999999987742 21111 11223 333 5899775
Q ss_pred CCcccceeeeecHH-HHHhhh------------cc------------------CCcccccccCCCCCCHHHHH-----HH
Q psy8199 495 GGYLPLSLVMTTDK-IYNSIY------------YK------------------NNINIFLHSHSYSGNPLACC-----AA 538 (965)
Q Consensus 495 gG~~pig~v~~~~~-i~~~~~------------~~------------------~~~~~~~~~~t~~~~~~~~a-----aa 538 (965)
-.+|++|+++++++ +++.+. .. ...+.+...+|.+.+.+.+. ++
T Consensus 314 ~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~ 393 (521)
T TIGR03801 314 ATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSL 393 (521)
T ss_pred CchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH
Confidence 32299999999754 222111 00 00011222344544554443 33
Q ss_pred HHHHHHHhcccH----HHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCcc--chhh---------HHHHH
Q psy8199 539 LATLEIFNKDNI----LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPE--QIET---------FSKKF 603 (965)
Q Consensus 539 ~a~L~~~~~~~~----~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~--~~~~---------~~~~~ 603 (965)
.+.|+. .+.. .+.++++.+.+.+.| ..+ +...++.|.++.+.....-.. .... ...++
T Consensus 394 ~all~~--~~~y~~~~~~~~~~R~~~l~~~L----g~~-~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~ 466 (521)
T TIGR03801 394 FALMDK--ENAYKAETKDICRRREKLLFRGL----GLP-LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDV 466 (521)
T ss_pred HHHhcc--chhHHHHHHHHHHHHHHHHHHhc----CCC-CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHH
Confidence 334431 1223 333344444444433 111 122345665555433211000 0001 12245
Q ss_pred HHHHH-HcCcEEeecC------CEEEEeCCcc-cCHHHHHHHHHhhhccc
Q psy8199 604 FVAAL-KNELLLRPIG------NTVYLMPPYI-LNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 604 ~~~l~-~~Gi~~~~~~------~~lR~~p~~~-~t~~~i~~~~~~l~~~~ 645 (965)
+.+|. +.||.+.|+. +++|++ ++ .+++++.++.+++.+.+
T Consensus 467 ~~~L~~e~gV~v~PG~~Fg~~~~~vRis--la~l~~~~~~~~~~rl~~~~ 514 (521)
T TIGR03801 467 LFRLAEETGIVLLPGGGFGGPEWSVRVS--LANLNEYDYAEIGRAIRKIL 514 (521)
T ss_pred HHHHHHhCCEEEeCchhcCCCCCeEEEE--ecCCCHHHHHHHHHHHHHHH
Confidence 55554 7799998852 479999 55 68888999988887654
No 352
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.66 E-value=3.1e-14 Score=163.26 Aligned_cols=338 Identities=14% Similarity=0.122 Sum_probs=223.7
Q ss_pred cCCcccccccccchhccCCCC-CHHHHHHHHHHHhhc-----cccccCCCCcHHHHHHHHHHHhhcC--CCCCeEEEcCC
Q psy8199 251 FSGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKL-----EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSD 322 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~s 322 (965)
.+....+||..|+.. + .+- ...+.+++.+.+... ..+....+..+++..+++++....+ ...++|++|+|
T Consensus 86 ~~~~~~i~f~~g~p~-~-~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G 163 (459)
T COG1167 86 EDDPSVIDFAGGLPD-P-SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSG 163 (459)
T ss_pred cCCCceecCCCCCCC-c-ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCC
Confidence 445678888877532 2 222 334555555554322 2233334556777788888873333 35669999999
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhH
Q psy8199 323 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 402 (965)
Q Consensus 323 GseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (965)
..+|+++++++..+ +++.|++=+++|++.. ..+......+..+|. +..+.
T Consensus 164 ~q~al~l~~~~l~~--------pGd~v~vE~PtY~~~~-------------~~~~~~g~~~~~vp~--d~~G~------- 213 (459)
T COG1167 164 AQQALDLLLRLLLD--------PGDTVLVEDPTYPGAL-------------QALEALGARVIPVPV--DEDGI------- 213 (459)
T ss_pred HHHHHHHHHHHhCC--------CCCEEEEcCCCcHHHH-------------HHHHHcCCcEEecCC--CCCCC-------
Confidence 99999999988753 6789999999999872 222222233344443 22222
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccc-cccccC
Q psy8199 403 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAE 481 (965)
Q Consensus 403 ~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~ 481 (965)
|+++|++.++.+ ++.++.+.|..||++|... +.+--++|.++|++||+++|=|++|..|-..+..- +...++
T Consensus 214 ----~~e~le~~~~~~--~~k~~y~~P~~qNPtG~tm-s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld 286 (459)
T COG1167 214 ----DPEALEEALAQW--KPKAVYVTPTFQNPTGVTM-SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALD 286 (459)
T ss_pred ----CHHHHHHHHhhc--CCcEEEECCCCCCCCCCcc-CHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhC
Confidence 789999998753 6788999997889999877 66778999999999999999999998875444321 122222
Q ss_pred C---CcceeeeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHH-
Q psy8199 482 I---WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQD- 557 (965)
Q Consensus 482 ~---~pDivt~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~- 557 (965)
- ..-+-+|||.++-| +++|++++++++++.+.. ..+..+.+.+.+.+++...-|. +..+.++++++
T Consensus 287 ~~~rViy~gSFSK~l~Pg-lRlG~vv~p~~~~~~~~~------~k~~~~~~~s~~~Q~~la~~l~---~G~~~~hl~~lR 356 (459)
T COG1167 287 APGRVIYLGSFSKTLAPG-LRLGYVVAPPELIEKLLR------LKQAADLGPSSLSQAALAAFLL---SGHYDRHLRRLR 356 (459)
T ss_pred CCCCEEEEeeehhhcccc-cceeeeeCCHHHHHHHHH------HHHHhcCCCChHHHHHHHHHHH---cCCHHHHHHHHH
Confidence 1 11233899999988 799999999999988875 3456677788888887776664 22333333333
Q ss_pred ------HHHHHHHHHcccCCC-cee-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec----------CC
Q psy8199 558 ------MKKITKALTSLITHP-KII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----------GN 619 (965)
Q Consensus 558 ------~~~l~~~L~~l~~~~-~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~ 619 (965)
.+.+.+.|.+. .+ .+. ..+..|+++++.+. ++ .....+.+.+.++|+.+.|. .+
T Consensus 357 ~~y~~rr~~l~~~L~~~--~~~~~~~~~p~gG~flwl~l~--~~----~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~ 428 (459)
T COG1167 357 REYARRRDALLEALAEY--LPELATWTRPEGGLFLWLELP--EG----IDARELLAAALEKGVVVTPLGSAFSADGDPRN 428 (459)
T ss_pred HHHHHHHHHHHHHHHHh--CCCCeeeecCCceEEEEEEcC--CC----CCHHHHHHHHHHCCCEEEcCCccccCCCCCCC
Confidence 33333333332 12 333 23334788888886 21 11456888999999999872 25
Q ss_pred EEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 620 TVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 620 ~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
.+|++.+ ..+++++++.+.++...+.
T Consensus 429 ~~Rl~~s-~~~~e~i~~gi~~l~~~~~ 454 (459)
T COG1167 429 GLRLSFS-SPSEEEIEEGIKRLAALLR 454 (459)
T ss_pred eEEEEcC-CCCHHHHHHHHHHHHHHHH
Confidence 8999976 3457788888887766543
No 353
>PRK08637 hypothetical protein; Provisional
Probab=99.66 E-value=1.6e-14 Score=163.94 Aligned_cols=309 Identities=9% Similarity=0.052 Sum_probs=184.4
Q ss_pred ccCCCCcHHHHHHHHHHHhhcC----CCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCcccccc
Q psy8199 290 MLSNLTHKPVIKLSEKLSSLTQ----YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA 365 (965)
Q Consensus 290 ~~~~~~~~~~~~la~~l~~~~~----~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~ 365 (965)
....+..+.+..+++.+.+..+ ...+++++|+|+++|+..++++... +++.|++.+|+|..+......
T Consensus 41 ~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~ 112 (388)
T PRK08637 41 APPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVD--------QGDTVLLPDHNWGNYKLTFNT 112 (388)
T ss_pred CCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcC--------CCCEEEEcCCCCccHHHHHHH
Confidence 3344556666777777665432 1235789999999999999887643 568899999999887432111
Q ss_pred ccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHh--CCCcEEEEEEccccccCCCcccCChH
Q psy8199 366 VTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSI 443 (965)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~~~aaii~ep~v~~~~G~~~~~~~ 443 (965)
..| ..++.+|....... .|++++++.++. ...+...++.+| +|++|.+. +.+
T Consensus 113 ~~g------------~~vv~v~~~~~~~~-----------~d~~~l~~~~~~~~~~~~~~~~~~~P--~NPTG~~~-s~~ 166 (388)
T PRK08637 113 RRG------------AEIVTYPIFDEDGG-----------FDTDALKEALQAAYNKGKVIVILNFP--NNPTGYTP-TEK 166 (388)
T ss_pred hcC------------CEEEEecccCCCCc-----------CCHHHHHHHHHhhccCCCEEEEEeCC--CCCCCCCC-CHH
Confidence 111 13344443211111 267888887762 122333444445 99999765 788
Q ss_pred HHHHHHHHHHh-----cCCeEEEeccccCCCcccccc-c-cc-ccCCCcce--e---eeccccCCCcccceeeeec----
Q psy8199 444 YLKLVREICNN-----YNIHLIADEIAVGCGRTGKFF-A-CE-HAEIWPDF--L---CLSKGITGGYLPLSLVMTT---- 506 (965)
Q Consensus 444 ~l~~l~~l~~~-----~g~llI~DEv~tg~gr~G~~~-~-~~-~~~~~pDi--v---t~sK~l~gG~~pig~v~~~---- 506 (965)
.+++|.++|++ |++++|.||+|.+|-..+... . +. ..+..+++ + +|||.++..++++|+++.+
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~ 246 (388)
T PRK08637 167 EATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAG 246 (388)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccC
Confidence 89999998875 999999999999875444321 1 11 12333343 2 5899655433899998853
Q ss_pred --HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH-------HHHHHcccCCCceeee
Q psy8199 507 --DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI-------TKALTSLITHPKIINF 577 (965)
Q Consensus 507 --~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l-------~~~L~~l~~~~~i~~v 577 (965)
+++++.+.... ........++.|.++++++.++|+ +..+.+++++..+.+ .+.|++..-.+++...
T Consensus 247 ~~~~l~~~~~~~~--~~~~~~~~~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~ 321 (388)
T PRK08637 247 SSQTVKEALEKKV--KGLIRSNISNGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAY 321 (388)
T ss_pred CcHHHHHHHHHHH--HHHhhcccCCCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc
Confidence 67777664300 000111234678889999988884 333444444333333 3333221000134444
Q ss_pred ecee-EEEEEEEeecCccchhhHHHHHHHHHH-HcCcEEeecC-CEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 578 RQKG-MIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 578 ~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~-~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
++.| +++++.+. + ....++.+.|. ++||.+.+.+ +++||+... .+.+++++.++++.+++
T Consensus 322 ~~~~g~~~~~~l~--~-----~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~-~~~~~i~~~~~~l~~~~ 384 (388)
T PRK08637 322 PFNSGYFMCLKLK--G-----VDAEELRVHLLEKYGIGTIALNETDLRIAFSC-VEEEDIPELFDSIYKAI 384 (388)
T ss_pred cccceEEEEecCC--h-----HHHHHHHHHHhhhcceEEEeccCCceEEEeec-CCHHHHHHHHHHHHHHH
Confidence 5444 55555553 1 11346777775 6799877644 689999443 67888999888876544
No 354
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=99.66 E-value=6.3e-15 Score=161.83 Aligned_cols=202 Identities=19% Similarity=0.247 Sum_probs=153.2
Q ss_pred CCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHH
Q psy8199 676 ANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENM 755 (965)
Q Consensus 676 g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~ 755 (965)
|..+. +.-+++ |+.||++|.||..... ........++.||+.+.++++.+.|++.|.|+||+ |+...+ +.++
T Consensus 10 gr~i~-~l~i~i-T~~CNl~C~yC~~~~~--~~~~~~~~ls~eei~~li~~~~~~Gv~~I~~tGGE-Pllr~d---l~~l 81 (329)
T PRK13361 10 GRTVT-YLRLSV-TDRCDFRCVYCMSEDP--CFLPRDQVLSLEELAWLAQAFTELGVRKIRLTGGE-PLVRRG---CDQL 81 (329)
T ss_pred CCccC-eEEEEe-cCCccccCCCCCCCCC--CcCCccCCCCHHHHHHHHHHHHHCCCCEEEEECcC-CCcccc---HHHH
Confidence 56554 234567 9999999999974421 11123345899999999999999999999998765 666544 4555
Q ss_pred HHHHHhcC-c-EeE-EecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCC-ceeeeE
Q psy8199 756 ICEVKKIG-L-ETC-LTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGI-NICCGG 830 (965)
Q Consensus 756 ~~~i~~~~-~-~i~-~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi-~v~~~~ 830 (965)
++.+++.+ + .+. +++|.+..+.++.|+++|+++++++++| +++.++++.+..++++.+++++.++++|+ ++..+.
T Consensus 82 i~~i~~~~~l~~i~itTNG~ll~~~~~~L~~aGl~~v~ISlDs~~~e~~~~i~~~g~~~~vl~~i~~~~~~Gi~~v~in~ 161 (329)
T PRK13361 82 VARLGKLPGLEELSLTTNGSRLARFAAELADAGLKRLNISLDTLRPELFAALTRNGRLERVIAGIDAAKAAGFERIKLNA 161 (329)
T ss_pred HHHHHhCCCCceEEEEeChhHHHHHHHHHHHcCCCeEEEEeccCCHHHhhhhcCCCCHHHHHHHHHHHHHcCCCceEEEE
Confidence 66566532 2 232 2445555679999999999999999999 89999999998899999999999999999 787777
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCC-CCCCCCCCHHHHHHHHHH
Q psy8199 831 IIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTP-LYGSSILDPLEFIRTIAV 888 (965)
Q Consensus 831 i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~-l~~~~~~~~~~~~~~ia~ 888 (965)
++-.|++.+++.+.++++++++ ++ +.+..++|..+.. +......+.+++.+.+..
T Consensus 162 v~~~g~N~~ei~~~~~~~~~~g--i~-~~~ie~mP~g~~~~~~~~~~~~~~e~~~~l~~ 217 (329)
T PRK13361 162 VILRGQNDDEVLDLVEFCRERG--LD-IAFIEEMPLGEIDERRRARHCSSDEVRAIIET 217 (329)
T ss_pred EEECCCCHHHHHHHHHHHHhcC--Ce-EEEEecccCCCccchhhccCcCHHHHHHHHHH
Confidence 6645799999999999999998 54 5577788876533 223345688888777644
No 355
>TIGR02666 moaA molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine.
Probab=99.66 E-value=7.7e-15 Score=162.28 Aligned_cols=204 Identities=17% Similarity=0.268 Sum_probs=154.7
Q ss_pred CCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHH
Q psy8199 676 ANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENM 755 (965)
Q Consensus 676 g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~ 755 (965)
|..+. +..+++ |+.|+++|.||...............++.+++.+.++.+.+.|++.|.++||+ |+...+ +.++
T Consensus 6 gr~~~-~l~i~v-T~~CNl~C~yC~~~~~~~~~~~~~~~ls~eei~~~i~~~~~~gv~~V~ltGGE-Pll~~~---l~~l 79 (334)
T TIGR02666 6 GRRID-YLRISV-TDRCNLRCVYCMPEGGGLDFLPKEELLTFEEIERLVRAFVGLGVRKVRLTGGE-PLLRKD---LVEL 79 (334)
T ss_pred CCccC-eEEEEe-cCccCcCCCCCCCCcCCCCcCCccCCCCHHHHHHHHHHHHHCCCCEEEEECcc-ccccCC---HHHH
Confidence 55554 344667 99999999999865411111123346899999999999999999999998765 665544 4455
Q ss_pred HHHHHh-cCc-EeEE-ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccC-CCCHHHHHHHHHHHHHcCCc-eeee
Q psy8199 756 ICEVKK-IGL-ETCL-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIS-TRDYENRLNTLKNVRNVGIN-ICCG 829 (965)
Q Consensus 756 ~~~i~~-~~~-~i~~-~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~-~~~~~~~~~~i~~~~~~Gi~-v~~~ 829 (965)
++.+++ .++ .+.+ ++|.+..+.++.|+++|++.+++++++ +++.++++.+ +.++++++++++.++++|+. +..+
T Consensus 80 i~~i~~~~gi~~v~itTNG~ll~~~~~~L~~~gl~~v~ISld~~~~~~~~~i~~~~~~~~~vl~~i~~l~~~G~~~v~in 159 (334)
T TIGR02666 80 VARLAALPGIEDIALTTNGLLLARHAKDLKEAGLKRVNVSLDSLDPERFAKITRRGGRLEQVLAGIDAALAAGLEPVKLN 159 (334)
T ss_pred HHHHHhcCCCCeEEEEeCchhHHHHHHHHHHcCCCeEEEecccCCHHHhheeCCCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 555554 345 4433 466767789999999999999999999 8999999985 67999999999999999997 8888
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCC-CCCCCCHHHHHHHHHH
Q psy8199 830 GIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLY-GSSILDPLEFIRTIAV 888 (965)
Q Consensus 830 ~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~-~~~~~~~~~~~~~ia~ 888 (965)
+++..|.+.+++.+.++++++++ . .+.+..|+|..++..+ .....+.+++++.++.
T Consensus 160 ~vv~~g~n~~ei~~l~~~~~~~g--v-~~~~ie~mp~~~~~~~~~~~~~~~~ei~~~l~~ 216 (334)
T TIGR02666 160 TVVMRGVNDDEIVDLAEFAKERG--V-TLRFIELMPLGEGNGWREKKFVSADEILERLEQ 216 (334)
T ss_pred EEEeCCCCHHHHHHHHHHHHhcC--C-eEEEEeccCCCCCccchhhcccCHHHHHHHHHh
Confidence 87766899999999999999998 4 4677778898776432 3344567777766543
No 356
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.64 E-value=2.2e-14 Score=163.04 Aligned_cols=301 Identities=15% Similarity=0.100 Sum_probs=192.7
Q ss_pred cHHHHHHHHHHHhhcCCCC-CeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccc
Q psy8199 296 HKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE 374 (965)
Q Consensus 296 ~~~~~~la~~l~~~~~~~~-~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~ 374 (965)
.+...++.++++++++.+. +.+++++||+++++.++.... .++++|++.+.+|++.... .
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~--------~~Gd~Vlv~~~~~~~~~~~-----------~ 101 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL--------SPGDKVVSFRIGQFSLLWI-----------D 101 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC--------CCCCEEEEeCCCchhHHHH-----------H
Confidence 4556778888888887554 468999999999999887553 3668899999777654211 1
Q ss_pred hhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC-CcEEEEEEccccccCCCcccCChHHHHHHHHH--
Q psy8199 375 IYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI-- 451 (965)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l-- 451 (965)
........+..++.+.... .|++++++++++.+ .++.+|++.. +.+++|.+.| +++|.++
T Consensus 102 ~~~~~g~~v~~v~~~~~~~------------~~~~~l~~~l~~~~~~~~k~v~~~~-~~~~tG~~~~----~~~i~~l~~ 164 (401)
T PLN02409 102 QMQRLNFDVDVVESPWGQG------------ADLDILKSKLRQDTNHKIKAVCVVH-NETSTGVTND----LAGVRKLLD 164 (401)
T ss_pred HHHHcCCceEEEECCCCCC------------CCHHHHHHHHhhCcCCCccEEEEEe-ecccccccCC----HHHHHHHHh
Confidence 1111122344555432111 25788888887521 2566677766 6788999987 8888888
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceeee--ccccCCCcccceeeeecHHHHHhhhccCCccccc------
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL------ 523 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~--sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~------ 523 (965)
|+++|+++|+|++++ +|.. .........|++++ +|++++. ..+|++++++++++.+.... ..++.
T Consensus 165 ~~~~g~~~vvD~v~s-~g~~----~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~-~~~~~~~~~~~ 237 (401)
T PLN02409 165 CAQHPALLLVDGVSS-IGAL----DFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAK-SPRVFFDWADY 237 (401)
T ss_pred hhccCcEEEEEcccc-cCCc----cccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCC-CCCeecCHHHH
Confidence 999999999999986 5421 22222334677754 6988775 46899999999887765311 01110
Q ss_pred ----ccC---CCCCCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHcccCCCceeee-ec-eeEEEEEEEeec
Q psy8199 524 ----HSH---SYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIINF-RQ-KGMIWAFDVIIE 591 (965)
Q Consensus 524 ----~~~---t~~~~~~~~aaa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-~g-~G~~~~i~~~~~ 591 (965)
..+ .++.+...+.+..++|+.+.+ +...++.+++.+++++.|+++ ....+..- .. .+.+..+.+.
T Consensus 238 ~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p-- 314 (401)
T PLN02409 238 LKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVP-- 314 (401)
T ss_pred HHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCC--
Confidence 111 234556678888888887654 346677778888888888765 11111110 11 1233444432
Q ss_pred CccchhhHHHHHHHHH-HHcCcEEeec-----CCEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 592 DPEQIETFSKKFFVAA-LKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 592 ~~~~~~~~~~~~~~~l-~~~Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
++ .....+.+.+ .+.|+.+..+ +..+|++..-..+.+++..++.++.+++.
T Consensus 315 ~~----~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~ 371 (401)
T PLN02409 315 EG----IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLK 371 (401)
T ss_pred CC----CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHH
Confidence 11 1123455555 4679998753 46899999888999999999988876543
No 357
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.64 E-value=5.6e-14 Score=157.98 Aligned_cols=305 Identities=14% Similarity=0.094 Sum_probs=190.4
Q ss_pred HHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCc
Q psy8199 277 KALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSY 356 (965)
Q Consensus 277 ~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~y 356 (965)
+++.+.+....+ +..+...++.+.++++++ .+++++++||++|+..+++.+.. .++++|++...+|
T Consensus 3 ~~~~~~~~~~~~-----~~~~~~~~~~~~la~~~~--~~~~~~~~sgt~al~~~l~~l~~-------~~gd~vl~~~~~~ 68 (352)
T cd00616 3 EAVEEVLDSGWL-----TLGPKVREFEKAFAEYLG--VKYAVAVSSGTAALHLALRALGI-------GPGDEVIVPSFTF 68 (352)
T ss_pred HHHHHHHHcCCc-----cCCHHHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHcCC-------CCCCEEEeCCcch
Confidence 456665555321 335678899999999995 47899999999999999987632 2567899999999
Q ss_pred cCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCC
Q psy8199 357 HGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGG 436 (965)
Q Consensus 357 Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G 436 (965)
|+........+ ....+++....... .|++++++.+. +++++|++.. ..|
T Consensus 69 ~~~~~~~~~~g-------------~~~~~~~~~~~~~~-----------~d~~~l~~~i~---~~~~~v~~~~----~~G 117 (352)
T cd00616 69 VATANAILLLG-------------ATPVFVDIDPDTYN-----------IDPELIEAAIT---PRTKAIIPVH----LYG 117 (352)
T ss_pred HHHHHHHHHcC-------------CeEEEEecCCCcCC-----------cCHHHHHHhcC---cCCeEEEEEC----CCC
Confidence 87633222211 12333333211111 36788888774 3566666644 357
Q ss_pred cccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec----cccCCCcccceeeeec-HHHHH
Q psy8199 437 MIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTT-DKIYN 511 (965)
Q Consensus 437 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s----K~l~gG~~pig~v~~~-~~i~~ 511 (965)
...+ +++|+++|+++|+++|+|++|+ +|.. +.....+...|+.++| |.+++| +.|+++.+ +++++
T Consensus 118 ~~~~----~~~i~~l~~~~~i~li~D~a~~-~g~~---~~~~~~~~~~d~~~~S~~~~K~~~~~--~gg~~~~~~~~~~~ 187 (352)
T cd00616 118 NPAD----MDAIMAIAKRHGLPVIEDAAQA-LGAT---YKGRKVGTFGDAGAFSFHPTKNLTTG--EGGAVVTNDEELAE 187 (352)
T ss_pred CcCC----HHHHHHHHHHcCCeEEEECCCC-CCCe---ECCEEcccCcceeEEcCCCCCCCccc--CceEEEECCHHHHH
Confidence 6655 8999999999999999999997 4432 1111223335777766 988654 45667665 46665
Q ss_pred hhhc---cCCcc------cccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeeee---c
Q psy8199 512 SIYY---KNNIN------IFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFR---Q 579 (965)
Q Consensus 512 ~~~~---~~~~~------~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~---g 579 (965)
.+.. .+... ....+.++..+++.++.++..++.+ +...++.+++.+++++.|.++.....+.... .
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~ 265 (352)
T cd00616 188 RARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLPGIRLPDVPPGVKH 265 (352)
T ss_pred HHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCce
Confidence 4432 11100 0012234456788888887777655 3467788888999999887653221111111 1
Q ss_pred eeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee----c------------------------CCEEEEeCCcccCH
Q psy8199 580 KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----I------------------------GNTVYLMPPYILNK 631 (965)
Q Consensus 580 ~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~------------------------~~~lR~~p~~~~t~ 631 (965)
...++.+.+. +. .......+.+.|.++||.+.. . .+.+|+.+....++
T Consensus 266 ~~~~~~~~~~--~~--~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~ 341 (352)
T cd00616 266 SYHLYVIRLD--PE--AGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTE 341 (352)
T ss_pred eeEEEEEEEC--Cc--CCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCH
Confidence 2344555443 10 011244678888899996641 0 14799999999999
Q ss_pred HHHHHHHHhhh
Q psy8199 632 NEIQHMTSAIF 642 (965)
Q Consensus 632 ~~i~~~~~~l~ 642 (965)
++++.++++++
T Consensus 342 ~di~~i~~~l~ 352 (352)
T cd00616 342 EEIDRVIEALR 352 (352)
T ss_pred HHHHHHHHHhC
Confidence 99999988763
No 358
>COG2896 MoaA Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism]
Probab=99.64 E-value=1.4e-14 Score=151.68 Aligned_cols=204 Identities=19% Similarity=0.269 Sum_probs=157.7
Q ss_pred CCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHH
Q psy8199 676 ANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENM 755 (965)
Q Consensus 676 g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~ 755 (965)
|..+. .--+++ |..|+++|.||-....+. ..++...+|+|||...++.+.+.|++.|-|+||+ |+...++..|.+.
T Consensus 7 gR~~~-~LRiSv-TdrCNfrC~YCm~eg~~~-~~~~~~~Ls~eei~~~~~~~~~~Gv~kvRlTGGE-PllR~dl~eIi~~ 82 (322)
T COG2896 7 GRPVR-YLRISV-TDRCNFRCTYCMPEGPLA-FLPKEELLSLEEIRRLVRAFAELGVEKVRLTGGE-PLLRKDLDEIIAR 82 (322)
T ss_pred CCEec-eEEEEE-ecCcCCcccccCCCCCcc-cCcccccCCHHHHHHHHHHHHHcCcceEEEeCCC-chhhcCHHHHHHH
Confidence 44443 234566 999999999997554111 1122346899999999999999999999998886 6677666665555
Q ss_pred HHHHHhcCcEeEE-ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCC-ceeeeEEE
Q psy8199 756 ICEVKKIGLETCL-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGI-NICCGGII 832 (965)
Q Consensus 756 ~~~i~~~~~~i~~-~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi-~v~~~~i~ 832 (965)
++.+ .--.+++ ++|.+-....+.||+||+++|+++++| +++.|++|.....++++++.|+.|.++|+ +|..++.+
T Consensus 83 l~~~--~~~~islTTNG~~L~~~a~~Lk~AGl~rVNVSLDsld~e~f~~IT~~~~~~~Vl~GI~~A~~~Gl~pVKlN~Vv 160 (322)
T COG2896 83 LARL--GIRDLSLTTNGVLLARRAADLKEAGLDRVNVSLDSLDPEKFRKITGRDRLDRVLEGIDAAVEAGLTPVKLNTVL 160 (322)
T ss_pred Hhhc--ccceEEEecchhhHHHHHHHHHHcCCcEEEeecccCCHHHHHHHhCCCcHHHHHHHHHHHHHcCCCceEEEEEE
Confidence 5544 1223444 478888999999999999999999999 99999999987779999999999999999 58888888
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCC-CCCCCCCCCCHHHHHHHHHH
Q psy8199 833 GLSESRDQRAELIFQLANLNPYPESVPINNLVQIKG-TPLYGSSILDPLEFIRTIAV 888 (965)
Q Consensus 833 Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~g-T~l~~~~~~~~~~~~~~ia~ 888 (965)
=-|-+..++.+.++++++.+ ..+.+-.|+|... +.+......+..++.+.+.-
T Consensus 161 ~kgvNd~ei~~l~e~~~~~~---~~lrfIE~m~~g~~~~~~~~~~~~~~~i~~~l~~ 214 (322)
T COG2896 161 MKGVNDDEIEDLLEFAKERG---AQLRFIELMPLGEGNSWRLDKYLSLDEILRKLEE 214 (322)
T ss_pred ecCCCHHHHHHHHHHHhhcC---CceEEEEEeecCcccchhhhccccHHHHHHHHHh
Confidence 55789999999999999998 4678888888764 22222235677777777666
No 359
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.64 E-value=4.7e-14 Score=159.38 Aligned_cols=298 Identities=14% Similarity=0.141 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHhhcCCCC--CeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccc
Q psy8199 297 KPVIKLSEKLSSLTQYKL--GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE 374 (965)
Q Consensus 297 ~~~~~la~~l~~~~~~~~--~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~ 374 (965)
+...++.+.++++++... +.+++++||+++++.++..... +++++++.+.+|.|.....
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~--------~~~~vlv~~~~~~~~~~~~----------- 97 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP--------RDGKVLVPDNGAYGARIAQ----------- 97 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccC--------CCCeEEEEeCCchHHHHHH-----------
Confidence 467788888999887533 4578999999999999987632 4567777777666642100
Q ss_pred hhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHh
Q psy8199 375 IYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN 454 (965)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~ 454 (965)
........+..+|.+.... .|++++++++.+.+ ++..|.+.. +++++|...| +++|.++|++
T Consensus 98 ~~~~~g~~~~~i~~~~~~~------------~d~~~l~~~l~~~~-~~~~v~~~~-~~~~tG~~~~----~~~i~~l~~~ 159 (368)
T PRK13479 98 IAEYLGIAHVVLDTGEDEP------------PDAAEVEAALAADP-RITHVALVH-CETTTGILNP----LDEIAAVAKR 159 (368)
T ss_pred HHHHcCCcEEEEECCCCCC------------CCHHHHHHHHHhCC-CCcEEEEEc-ccCccccccC----HHHHHHHHHH
Confidence 0011112344555432111 36788888886533 333333333 4788999887 8899999999
Q ss_pred cCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccceeeeecHHHHHhhhccCCccccc---------
Q psy8199 455 YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL--------- 523 (965)
Q Consensus 455 ~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~--------- 523 (965)
+|+++|+|.++ +||.. ..... ...+|+++ ++|.+.|. ..+|++++++++++.+... ..++.
T Consensus 160 ~~~~livDa~~-~~g~~--~~~~~--~~~~d~~v~s~~K~l~g~-~G~G~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 231 (368)
T PRK13479 160 HGKRLIVDAMS-SFGAI--PIDIA--ELGIDALISSANKCIEGV-PGFGFVIARRSELEACKGN--SRSLSLDLYDQWAY 231 (368)
T ss_pred cCCEEEEEccc-ccCCc--ccccc--ccCceEEEecCccccccC-CCceEEEECHHHHHHhhcC--CCCeeecHHHHHhh
Confidence 99999999777 47532 22222 23467764 57888664 3579999999988776542 11110
Q ss_pred ----ccCCCCCCHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHHcccCCCce-ee-eeceeEEEEEEEeecCc
Q psy8199 524 ----HSHSYSGNPLACCAALATLEIFNKD----NILQRISQDMKKITKALTSLITHPKI-IN-FRQKGMIWAFDVIIEDP 593 (965)
Q Consensus 524 ----~~~t~~~~~~~~aaa~a~L~~~~~~----~~~~~~~~~~~~l~~~L~~l~~~~~i-~~-v~g~G~~~~i~~~~~~~ 593 (965)
....|+.+..++++..++++.+.++ +..+++.++.+++++.|+++ ....+ .. .+. ..+..+.+. ..
T Consensus 232 ~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~-~~~~~~~~~--~~ 307 (368)
T PRK13479 232 MEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQS-PIIVTFHAP--AD 307 (368)
T ss_pred hcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcC-ceEEEEECC--CC
Confidence 1112456777777777888766432 34566777788888887765 11111 10 111 122333322 11
Q ss_pred cchhhHHHHHHHHHHHcCcEEeec----CCEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 594 EQIETFSKKFFVAALKNELLLRPI----GNTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 594 ~~~~~~~~~~~~~l~~~Gi~~~~~----~~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
. ......+.+.|.++||.++++ .+.+|++.....+.++++.+++.+.+.+
T Consensus 308 ~--~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l 361 (368)
T PRK13479 308 P--AYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEAL 361 (368)
T ss_pred C--CcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 0 001346888899999999874 2589998655679999999999887654
No 360
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.63 E-value=6.2e-14 Score=160.46 Aligned_cols=331 Identities=14% Similarity=0.080 Sum_probs=187.3
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHh-hcc--cc-ccCCCCc---HHHHH-HHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLN-KLE--HV-MLSNLTH---KPVIK-LSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~-~~~--~~-~~~~~~~---~~~~~-la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+++|.+..+-. + -+|+|.+|+.+.+. ... .. ....... +..++ .++.++++++.....+++ +||++
T Consensus 19 ~~~~~~~~~~~--~---~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~-~sgt~ 92 (402)
T cd00378 19 RETLELIASEN--F---TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQP-HSGSQ 92 (402)
T ss_pred HhCeeeeccCC--c---CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeec-CCcHH
Confidence 56788766532 2 38999999987652 221 11 1101112 22233 334566777654434444 57999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCC--CCCCCCCChhHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS--RNINKGNSANEI 403 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 403 (965)
|+..++..... ++++|++.++.|.+....... .. ..........++.+.. .+.
T Consensus 93 a~~~~l~~l~~--------~Gd~Vl~~~~~~~~~~~~~~~-~~-------~~~~g~~~~~~~~~~~~~~~~--------- 147 (402)
T cd00378 93 ANLAVYFALLE--------PGDTIMGLDLSHGGHLTHGSF-TK-------VSASGKLFESVPYGVDPETGL--------- 147 (402)
T ss_pred HHHHHHHHhcC--------CCCEEEEecCccCcccccccc-cc-------ccccceeEEEecCCcCcccCC---------
Confidence 99999887643 567899999988665221100 00 0000011223333211 111
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEE-ccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccc-cCCCcccccccccccC
Q psy8199 404 ARCAIFDLEILLKKNHNKIAAIII-EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA-VGCGRTGKFFACEHAE 481 (965)
Q Consensus 404 ~~~d~~~le~~l~~~~~~~aaii~-ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tg~gr~G~~~~~~~~~ 481 (965)
.|++++++++.+. ++.+|++ +| . .|...+ +++|.++|++||+++|+||+| .|+...|... . ...
T Consensus 148 --id~~~l~~~i~~~--~~~~v~~~~~-~---~~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~-~-~~~ 213 (402)
T cd00378 148 --IDYDALEKMALEF--KPKLIVAGAS-A---YPRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFP-N-PLP 213 (402)
T ss_pred --cCHHHHHHHHHhC--CCCEEEecCc-c---cCCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCC-C-ccc
Confidence 3788898888642 2334444 44 2 244444 889999999999999999996 4432222111 1 111
Q ss_pred CCccee--eeccccCCCcccceeeeecH-HHHHhhhccCCcccccccCCCCC-CHHHHHHHHHHHHHHhc---ccHHHHH
Q psy8199 482 IWPDFL--CLSKGITGGYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYSG-NPLACCAALATLEIFNK---DNILQRI 554 (965)
Q Consensus 482 ~~pDiv--t~sK~l~gG~~pig~v~~~~-~i~~~~~~~~~~~~~~~~~t~~~-~~~~~aaa~a~L~~~~~---~~~~~~~ 554 (965)
..|++ +++|+++| ++.|++++++ ++++.+... ...+.++. ++..++++..++..... ++..+++
T Consensus 214 -~~dv~~~s~sK~l~G--~~gg~i~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 284 (402)
T cd00378 214 -GADVVTTTTHKTLRG--PRGGLILTRKGELAKKINSA------VFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQV 284 (402)
T ss_pred -CCcEEEeccccCCCC--CCceEEEeccHHHHHHHHHH------hCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 35765 57899955 6889988876 888777541 11111222 22333333344443322 3456778
Q ss_pred HHHHHHHHHHHHcccCCCceeee-e-ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee-----------cCCEE
Q psy8199 555 SQDMKKITKALTSLITHPKIINF-R-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-----------IGNTV 621 (965)
Q Consensus 555 ~~~~~~l~~~L~~l~~~~~i~~v-~-g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~-----------~~~~l 621 (965)
+++.+++.+.|.++ ++..+ . ..+.++++.+. ..+. ....+.+.|.++||.+.+ ..+.+
T Consensus 285 ~~~~~~l~~~L~~~----g~~~~~~~~~~~~v~v~~~-~~~~----~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~l 355 (402)
T cd00378 285 VENAKALAEALKER----GFKVVSGGTDNHLVLVDLR-PKGI----TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGI 355 (402)
T ss_pred HHHHHHHHHHHHhC----CCeEeecCCCCeEEEEeCC-ccCC----CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCee
Confidence 88888888888765 23222 1 23556656653 1111 123456678889999963 12579
Q ss_pred EEeCCcc----cCHHHHHHHHHhhhccccc
Q psy8199 622 YLMPPYI----LNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 622 R~~p~~~----~t~~~i~~~~~~l~~~~~~ 647 (965)
|+++... +++++++.+++.+.+.+.+
T Consensus 356 Ri~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 356 RIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred EecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 9987664 4789999999988765543
No 361
>PRK08629 coproporphyrinogen III oxidase; Provisional
Probab=99.62 E-value=1.8e-14 Score=162.52 Aligned_cols=198 Identities=12% Similarity=0.108 Sum_probs=149.0
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCC--CCEEEEeeccCCCCcccHHHHHHHHHHHHhc----
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDG--ATRFCMGAAWRELKDRDLDNIENMICEVKKI---- 762 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g--~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~---- 762 (965)
-..|+..|.||.|.+..... ...+ .-.+.+.++++...+.| +..+++.||. |.. . .+.+.+++..+++.
T Consensus 59 IPFC~~~C~yC~f~~~~~~~-~~~~-~Y~~~L~~Ei~~~~~~~~~~~siy~GGGT-Ps~-l-~~~L~~ll~~i~~~f~i~ 133 (433)
T PRK08629 59 VPFCHTLCPYCSFHRFYFKE-DKAR-AYFISLRKEMEMVKELGYDFESMYVGGGT-TTI-L-EDELAKTLELAKKLFSIK 133 (433)
T ss_pred eCCccCcCCCCCCcCcCCCc-chHH-HHHHHHHHHHHHHHhcCCceEEEEECCCc-ccc-C-HHHHHHHHHHHHHhCCCc
Confidence 36699999999988642111 1111 12577888887666554 5667776553 422 2 46677777777652
Q ss_pred CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHH---HHHHHHHHHcCCceeeeEEEec-CCC
Q psy8199 763 GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENR---LNTLKNVRNVGINICCGGIIGL-SES 837 (965)
Q Consensus 763 ~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~---~~~i~~~~~~Gi~v~~~~i~Gl-~et 837 (965)
.+.+.+++..++++.++.|+++ ++++++|+|| ++++++.+++.++.+.. ++.++.+++.+..+++.+|+|+ |||
T Consensus 134 eis~E~~P~~lt~e~L~~l~~~-vnrlsiGVQS~~d~vLk~~gR~h~~~~~~~~~~~l~~~~~~~~~v~~DlI~GlPgqT 212 (433)
T PRK08629 134 EVSCESDPNHLDPPKLKQLKGL-IDRLSIGVQSFNDDILKMVDRYEKFGSGQETFEKIMKAKGLFPIINVDLIFNFPGQT 212 (433)
T ss_pred eEEEEeCcccCCHHHHHHHHHh-CCeEEEecCcCCHHHHHHcCCCCChhHHHHHHHHHHHHhccCCeEEEEEEccCCCCC
Confidence 3455678999999999999999 9999999999 99999999998876555 5555555444456899999999 699
Q ss_pred HHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCC---CCCCCHHHHHHHHHHHHHHCC
Q psy8199 838 RDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG---SSILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 838 ~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~---~~~~~~~~~~~~ia~~R~~lp 894 (965)
.+++.++++.+.+++ ++.|.++++++.|+|.... .+.++.++..++..+++..+.
T Consensus 213 ~e~~~~~l~~~~~l~--p~~is~y~L~~~~~t~~~~~~~~~~p~~d~~~~~~~~~~~~l~ 270 (433)
T PRK08629 213 DEVLQHDLDIAKRLD--PRQITTYPLMKSHQTRKSVKGSLGASQKDNERQYYQIINELFG 270 (433)
T ss_pred HHHHHHHHHHHHhCC--CCEEEEccceeccCchhhhcCCCCCcCHHHHHHHHHHHHHHHC
Confidence 999999999999999 9999999999999997542 234566677778888877775
No 362
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.62 E-value=2.8e-14 Score=160.56 Aligned_cols=241 Identities=15% Similarity=0.200 Sum_probs=158.6
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
...+.++...+++++++++.+ .+.+++++||++|+..+++.... ++++|++.... ||.+.....
T Consensus 48 y~r~~~p~~~~le~~la~l~g--~~~~~~~~sG~~Ai~~al~al~~--------~Gd~Vl~~~~~-~~~t~~~~~----- 111 (380)
T TIGR01325 48 YSRYANPTVAAFEERIAALEG--AERAVATATGMSAIQAALMTLLQ--------AGDHVVASRSL-FGSTVGFIS----- 111 (380)
T ss_pred eecCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEecCC-cchHHHHHH-----
Confidence 356778889999999999985 47889999999999999976532 45678776654 454322111
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
.........+.+++. .|+++++++++ +++++|++|. ++|+.|.+.+ +++|.+
T Consensus 112 ---~~~~~~g~~v~~v~~-----------------~d~~~l~~~i~---~~tklV~le~-p~np~g~~~d----l~~I~~ 163 (380)
T TIGR01325 112 ---EILPRFGIEVSFVDP-----------------TDLNAWEAAVK---PNTKLVFVET-PSNPLGELVD----IAALAE 163 (380)
T ss_pred ---HHHHHhCCEEEEECC-----------------CCHHHHHHhcC---CCceEEEEEC-CCCCCCeeeC----HHHHHH
Confidence 001111123444443 25677777774 3578899998 8999998876 999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccc-eeeeecHHHHHhhhccCCcccccccCC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pi-g~v~~~~~i~~~~~~~~~~~~~~~~~t 527 (965)
+|+++|+++|+||++..+ ... .-....+|+++ ++|.++|+...+ |++++++++++.+.... ..++.
T Consensus 164 la~~~gi~livD~a~~~~-~~~-----~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~----~~~g~- 232 (380)
T TIGR01325 164 LAHAIGALLVVDNVFATP-VLQ-----QPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYL----RHTGP- 232 (380)
T ss_pred HHHHcCCEEEEECCCccc-ccC-----CchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHH----HhhCC-
Confidence 999999999999998632 111 11234578885 789998744555 67778888877665410 01222
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
..+|..++.++..|+.+.. ..++..++..++.+.|++.. .+|++. ...|-|.|+.|++.
T Consensus 233 -~~~p~~a~~~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 233 -AMSPFNAWVLLKGLETLSL--RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred -CCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 3456777777776766543 35566667777777776542 134322 12467889999985
No 363
>PRK00164 moaA molybdenum cofactor biosynthesis protein A; Reviewed
Probab=99.62 E-value=3e-14 Score=157.50 Aligned_cols=203 Identities=18% Similarity=0.267 Sum_probs=153.2
Q ss_pred CCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHH
Q psy8199 676 ANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENM 755 (965)
Q Consensus 676 g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~ 755 (965)
|+.+. +.-+++ |.+|+.+|.||..... .......+.++.+++.+.++.+.+.|++.|.|+||+ |+...+ +.++
T Consensus 13 ~r~~~-~l~i~v-T~~Cnl~C~yC~~~~~-~~~~~~~~~ls~eei~~~i~~~~~~gi~~I~~tGGE-Pll~~~---l~~l 85 (331)
T PRK00164 13 GRKFT-YLRISV-TDRCNFRCTYCMPEGY-LPFLPKEELLSLEEIERLVRAFVALGVRKVRLTGGE-PLLRKD---LEDI 85 (331)
T ss_pred CCccC-eEEEEE-cCCcCcCCCCCCCccC-CCCCCccccCCHHHHHHHHHHHHHCCCCEEEEECCC-CcCccC---HHHH
Confidence 55554 344667 9999999999976531 111123456899999999999989999999998865 666544 4555
Q ss_pred HHHHHhc--CcEeEE-ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCC-ceeeeE
Q psy8199 756 ICEVKKI--GLETCL-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGI-NICCGG 830 (965)
Q Consensus 756 ~~~i~~~--~~~i~~-~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi-~v~~~~ 830 (965)
++.+++. ...+.+ ++|.+..+.++.|+++|++.+.+++++ +++.++.+.+..++++++++++.++++|+ .+...+
T Consensus 86 i~~i~~~~~~~~i~itTNG~ll~~~~~~L~~agl~~i~ISlds~~~e~~~~i~~~~~~~~vl~~i~~~~~~g~~~v~i~~ 165 (331)
T PRK00164 86 IAALAALPGIRDLALTTNGYLLARRAAALKDAGLDRVNVSLDSLDPERFKAITGRDRLDQVLAGIDAALAAGLTPVKVNA 165 (331)
T ss_pred HHHHHhcCCCceEEEEcCchhHHHHHHHHHHcCCCEEEEEeccCCHHHhccCCCCCCHHHHHHHHHHHHHCCCCcEEEEE
Confidence 5555543 223332 445555678999999999999999999 99999999998999999999999999999 888777
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCC-CCCCCCCCCHHHHHHHHHH
Q psy8199 831 IIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGT-PLYGSSILDPLEFIRTIAV 888 (965)
Q Consensus 831 i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT-~l~~~~~~~~~~~~~~ia~ 888 (965)
++-.|.+.+++.+.++++++++ . .+.+..|+|.... .+......+.+++.+.+..
T Consensus 166 vv~~g~n~~ei~~l~~~~~~~g--v-~v~~ie~~p~~~~~~~~~~~~~~~~~~~~~l~~ 221 (331)
T PRK00164 166 VLMKGVNDDEIPDLLEWAKDRG--I-QLRFIELMPTGEGNEWFRKHHLSGAEIRARLAE 221 (331)
T ss_pred EEECCCCHHHHHHHHHHHHhCC--C-eEEEEEeeECCCCcchhhhcCCCHHHHHHHHHh
Confidence 6645889999999999999998 4 4667778887654 3334445677777776654
No 364
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.62 E-value=2.2e-13 Score=156.49 Aligned_cols=331 Identities=13% Similarity=0.095 Sum_probs=188.5
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhh-cccccc-CCC--CcHHHHHH----HHHHHhhcCCCCCeEEEcCChhH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNK-LEHVML-SNL--THKPVIKL----SEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~-~~~~~~-~~~--~~~~~~~l----a~~l~~~~~~~~~~v~~~~sGse 325 (965)
+.+|++.++-.. -+|+|.+|+...+.. .+.... ..+ ..+....+ .+.+++.++.....+++ +||++
T Consensus 25 ~~~~~l~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~-~sgt~ 98 (416)
T PRK00011 25 EEHIELIASENF-----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQP-HSGSQ 98 (416)
T ss_pred hcCeeeecccCc-----CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeec-CCchH
Confidence 567888776332 589999998776532 111110 111 11223333 33678888755444544 57899
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCcccc--ccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGA--LAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
|+..++.... .++++|++..+.|.+..... ....+ ....+..++.....+
T Consensus 99 al~~~l~~l~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~---------- 150 (416)
T PRK00011 99 ANAAVYFALL--------KPGDTILGMDLAHGGHLTHGSPVNFSG----------KLYNVVSYGVDEETG---------- 150 (416)
T ss_pred HHHHHHHHhc--------CCCCEEEEeccccCCcccccccccccc----------ceeeEeecCcCcccC----------
Confidence 9999887663 25678999988876542111 11111 000122222211001
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCC
Q psy8199 404 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 483 (965)
Q Consensus 404 ~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 483 (965)
..|++++++++++. ++.+|++.. +..|...+ +++|.++|++||+++|+||+|. +|..+........+ .
T Consensus 151 -~~d~~~l~~~i~~~--~~k~v~~~~---~~~~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~~~~~-~ 218 (416)
T PRK00011 151 -LIDYDEVEKLALEH--KPKLIIAGA---SAYSRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHPSPVP-H 218 (416)
T ss_pred -CcCHHHHHHHHHhc--CCCEEEECC---CcCCCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccCCCCC-C
Confidence 14788999888642 334455532 23344444 8999999999999999999985 33332110011112 3
Q ss_pred ccee--eeccccCCCcccceeeeec-HHHHHhhhccCCcccccccCCCCC-CHHHHHHHHHH-HHHHhc--ccHHHHHHH
Q psy8199 484 PDFL--CLSKGITGGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSG-NPLACCAALAT-LEIFNK--DNILQRISQ 556 (965)
Q Consensus 484 pDiv--t~sK~l~gG~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~t~~~-~~~~~aaa~a~-L~~~~~--~~~~~~~~~ 556 (965)
.|++ +++|+++| .+.|+++++ +++++.+... ...++++. ....++++..+ ++.+.+ ++..++.++
T Consensus 219 ~di~~~S~~K~l~g--~~gg~i~~~~~~~~~~l~~~------~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~ 290 (416)
T PRK00011 219 ADVVTTTTHKTLRG--PRGGLILTNDEELAKKINSA------VFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVK 290 (416)
T ss_pred CcEEEecCCcCCCC--CCceEEEeCCHHHHHHHHHH------hCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 5766 57899965 578889885 6888777541 11112222 22233333333 333322 346788888
Q ss_pred HHHHHHHHHHcccCCCceeeee--ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee----c-------CCEEEE
Q psy8199 557 DMKKITKALTSLITHPKIINFR--QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----I-------GNTVYL 623 (965)
Q Consensus 557 ~~~~l~~~L~~l~~~~~i~~v~--g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-------~~~lR~ 623 (965)
+.+++++.|+++ ++.... ..+.++.+.+. ..+ .....+.+.|.++||.+.. . .+.+|+
T Consensus 291 ~~~~l~~~L~~~----g~~~~~~~~~~~~~~i~~~-~~~----~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri 361 (416)
T PRK00011 291 NAKALAEALAER----GFRVVSGGTDNHLVLVDLR-SKG----LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRI 361 (416)
T ss_pred HHHHHHHHHHhC----CCeeeecCCCCeEEEEeCc-ccC----CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEe
Confidence 999999998775 232221 23456666553 110 0134577788899999872 1 245888
Q ss_pred eCC----cccCHHHHHHHHHhhhccccc
Q psy8199 624 MPP----YILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 624 ~p~----~~~t~~~i~~~~~~l~~~~~~ 647 (965)
... ..+++++++.+++.+.+.+..
T Consensus 362 ~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 362 GTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred cCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 542 256799999999988765443
No 365
>PLN02651 cysteine desulfurase
Probab=99.62 E-value=2.8e-14 Score=160.65 Aligned_cols=320 Identities=13% Similarity=0.076 Sum_probs=193.1
Q ss_pred cccccccchhccCCCCCHHHHHHHHHHHhhccccccC------CCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHH
Q psy8199 256 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLS------NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEV 329 (965)
Q Consensus 256 ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~ 329 (965)
|||..+. +.-++++.+++.+.+......... ....+...++.++++++++.+.+.++|++|||+|+..
T Consensus 2 Yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~ 75 (364)
T PLN02651 2 YLDMQAT------TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNL 75 (364)
T ss_pred cccCcCC------CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHH
Confidence 7887654 236899999998877542110000 0113345678888999998767799999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHH
Q psy8199 330 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 409 (965)
Q Consensus 330 Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 409 (965)
++..+..... .++++|++.+..|+........+ ......+..+|.... +. .|++
T Consensus 76 ~l~~~~~~~~----~~g~~vl~~~~~h~s~~~~~~~~----------~~~g~~v~~v~~~~~-~~-----------~d~~ 129 (364)
T PLN02651 76 AIKGVMHFYK----DKKKHVITTQTEHKCVLDSCRHL----------QQEGFEVTYLPVKSD-GL-----------VDLD 129 (364)
T ss_pred HHHHHHHhcc----CCCCEEEEcccccHHHHHHHHHH----------HhcCCEEEEEccCCC-Cc-----------CCHH
Confidence 9987644211 24567777665554431111000 001113444444321 11 2678
Q ss_pred HHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeee
Q psy8199 410 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL 489 (965)
Q Consensus 410 ~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~ 489 (965)
+++++++ +++.+|++.. +++++|.+.| +++|.++|++||+++++|.+|+ +|.. .+......+|++++
T Consensus 130 ~l~~~i~---~~t~lv~v~~-~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~----~~~~~~~~~D~~~~ 196 (364)
T PLN02651 130 ELAAAIR---PDTALVSVMA-VNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI----PVDVDDLGVDLMSI 196 (364)
T ss_pred HHHHhcC---CCcEEEEEEC-CCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc----ccCcccCCCCEEEe
Confidence 8888885 3467777777 7899999988 9999999999999999999997 4421 22223345799988
Q ss_pred c--cccCCCcccceeeeecHHHHHhhhcc---CCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHH
Q psy8199 490 S--KGITGGYLPLSLVMTTDKIYNSIYYK---NNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKIT 562 (965)
Q Consensus 490 s--K~l~gG~~pig~v~~~~~i~~~~~~~---~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~ 562 (965)
| | + +|...+|+++.+++....+... +........ .+.|..++.+..++|+.+.+ +...++.+++.+++.
T Consensus 197 s~hK-~-~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~--GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~ 272 (364)
T PLN02651 197 SGHK-I-YGPKGVGALYVRRRPRVRLEPLMSGGGQERGRRS--GTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLL 272 (364)
T ss_pred chhh-h-CCCCceEEEEEcCCCCCCCCccccCCCccCCccC--CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 5 6 5 4434688888888765544321 111000111 23456677778888887753 234566666777777
Q ss_pred HHHHcccCCCceeeee------ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-------------------
Q psy8199 563 KALTSLITHPKIINFR------QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------------------- 617 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~------g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------------- 617 (965)
+.|++. .+++.... ....+..|.+. . . ....+...|.+ |.++.+
T Consensus 273 ~~l~~~--~~~~~i~~~~~~~~~~~~i~~~~~~--~-~----~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~ 341 (364)
T PLN02651 273 NGLRAK--LGGVRVNGPRDPEKRYPGTLNLSFA--Y-V----EGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGV 341 (364)
T ss_pred HHHHhh--CCCEEEECCCCcccCcCCEEEEEeC--C-C----CHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCC
Confidence 766542 23332211 11335555553 1 0 12345555543 555311
Q ss_pred -----CCEEEEeCCcccCHHHHH
Q psy8199 618 -----GNTVYLMPPYILNKNEIQ 635 (965)
Q Consensus 618 -----~~~lR~~p~~~~t~~~i~ 635 (965)
.+.+|++++...|++||+
T Consensus 342 ~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 342 PEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred ChHHhCceEEEEcCCCCCHHHcC
Confidence 258999999999999874
No 366
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=99.61 E-value=3.8e-14 Score=150.27 Aligned_cols=219 Identities=15% Similarity=0.236 Sum_probs=164.3
Q ss_pred EEEeEeEeeccCCCCC-CCCCCCCCC------cCCCCcc------cccCCCHHHHHHHHHHHHHCCCC----EEEEeecc
Q psy8199 679 IELAVLLSIKTGGCTE-DCGYCPQST------HYNTEIT------ATKILSIESVITAAQKAKSDGAT----RFCMGAAW 741 (965)
Q Consensus 679 ~~~~~~i~~~s~~C~~-~C~fC~~~~------~~~~~~~------~~~~~~~eei~~~~~~~~~~g~~----~i~l~~g~ 741 (965)
+.+.+++- +-.+||+ +|.||...- .+....+ ..+.-+-.|+...++++...|.. ++.|.||.
T Consensus 65 vaVVaVmt-~p~~CPHg~CvfCpgg~~~~spQSytg~ep~~~R~~~~~ydpY~q~~~Rl~qL~~igh~~~KvEliimGGT 143 (515)
T COG1243 65 VAVVAVMT-SPHGCPHGRCVFCPGGPDKDSPQSYTGEEPAALRAIKNRYDPYEQVRARLKQLETIGHTSDKVELIIMGGT 143 (515)
T ss_pred ceEEEEec-CCCCCCCCeEEeCCCCCCCCCCcccCCCCchhhhHhhccCCcHHHHHHHHHHHHHcCCCcceEEEEEeccc
Confidence 44434332 2689997 999997662 1111100 11223457888888888888732 56777776
Q ss_pred CCCCcccHHHHHHHH----HHHH-------------------hcCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CH
Q psy8199 742 RELKDRDLDNIENMI----CEVK-------------------KIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SP 797 (965)
Q Consensus 742 ~~~~~~~~~~~~~~~----~~i~-------------------~~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~ 797 (965)
++ ..+.++=..++ +.+. -.|+.+.+.+...+++.++.|++.|++++.+|+|| .+
T Consensus 144 Ft--a~~~~yqe~Fi~~~~~amn~f~~~le~a~~~ne~~~~r~vgitiETRPD~~~ee~ld~mlkyG~TrVELGVQSiyd 221 (515)
T COG1243 144 FT--ALSLEYQEWFLKVALKAMNDFGYDLEEAQRKNETAELRCVGITIETRPDYIDEEHLDQMLKYGVTRVELGVQSIYD 221 (515)
T ss_pred cc--CCCHHHHHHHHHHHHHhhhccchhHHHHHHhhcccccceeEEEEecCccccCHHHHHHHHhcCCcEEEEeeeeHHH
Confidence 54 33333322222 2222 13577888999999999999999999999999999 89
Q ss_pred HHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec-CCCHHHHHHHHHHHHhcCC-CCCceeeccccccCCCCCCC--
Q psy8199 798 KLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNP-YPESVPINNLVQIKGTPLYG-- 873 (965)
Q Consensus 798 ~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~-~~~~i~~~~~~P~~gT~l~~-- 873 (965)
++++...++|+.++..++.+.++++|++++.|+|.|| |.+.|--+++.+.+-+.+. .|+.+.+++-...+||+|++
T Consensus 222 ~Vl~~~~RGHtvedv~~a~rLlKd~GfKv~~HiMpGLPgs~~erDl~~f~~~f~~p~f~PDmlKIYPtLVi~gT~Ly~mw 301 (515)
T COG1243 222 DVLERTKRGHTVEDVVEATRLLKDAGFKVGYHIMPGLPGSDFERDLESFREIFEDPRFRPDMLKIYPTLVIEGTELYEMW 301 (515)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHhcCcEEEEEecCCCCCCChHHHHHHHHHHHhCCCCCCCeEEEeeeEEECCchHHHHH
Confidence 9999999999999999999999999999999999999 5666655555555555444 38999999999999999984
Q ss_pred ----CCCCCHHHHHHHHHHHHHHCCCCceecc
Q psy8199 874 ----SSILDPLEFIRTIAVARITMPTSRIRMS 901 (965)
Q Consensus 874 ----~~~~~~~~~~~~ia~~R~~lp~~~i~i~ 901 (965)
..|.+.++.+++++.+-.++|++ +++.
T Consensus 302 k~G~Ykpy~~EEaVeli~~i~~~~p~w-vRV~ 332 (515)
T COG1243 302 KRGLYKPYTTEEAVELIVEIYRLEPKW-VRVI 332 (515)
T ss_pred HcCCCCCCCHHHHHHHHHHHHHhcCCC-cEEE
Confidence 58889999999999999999987 5444
No 367
>COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism]
Probab=99.61 E-value=2.4e-14 Score=160.02 Aligned_cols=201 Identities=14% Similarity=0.222 Sum_probs=155.6
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC-----CCCEEEEeeccCCCCcccHHHHHHHHHHHHhc-
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD-----GATRFCMGAAWRELKDRDLDNIENMICEVKKI- 762 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~-----g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~- 762 (965)
-..|...|.||.++........... .=.+-+.++++..... .++.+++.||.. .....+.+..++..+++.
T Consensus 41 iPFC~~~C~YC~fn~~~~~~~~~~~-~Y~~aL~~Ei~~~~~~~~~~~~v~ti~~GGGTP--slL~~~~l~~ll~~l~~~~ 117 (416)
T COG0635 41 IPFCVSKCPYCDFNSHVTKRGQPVD-EYLDALLEEIELVAALLGGQREVKTIYFGGGTP--SLLSPEQLERLLKALRELF 117 (416)
T ss_pred cccccccCCCCCCeeeccCCCChHH-HHHHHHHHHHHHHHhhcCCCCeEEEEEECCCcc--ccCCHHHHHHHHHHHHHhc
Confidence 4679999999999875443310000 0124455555444333 267888877743 344556666666666541
Q ss_pred -------CcEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCC-ceeeeEEEe
Q psy8199 763 -------GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGI-NICCGGIIG 833 (965)
Q Consensus 763 -------~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi-~v~~~~i~G 833 (965)
-+.+.++++.++.+.++.|+++|++++++|+|| ++++.+.+.+.++.++..++++.+++.|+ .++..+|||
T Consensus 118 ~~~~~~~EitiE~nP~~~~~e~~~~l~~~GvNRiSlGVQsf~~~~lk~lgR~h~~~~~~~a~~~~~~~g~~~in~DLIyg 197 (416)
T COG0635 118 NDLDPDAEITIEANPGTVEAEKFKALKEAGVNRISLGVQSFNDEVLKALGRIHDEEEAKEAVELARKAGFTSINIDLIYG 197 (416)
T ss_pred ccCCCCceEEEEeCCCCCCHHHHHHHHHcCCCEEEeccccCCHHHHHHhcCCCCHHHHHHHHHHHHHcCCCcEEEEeecC
Confidence 233455889999999999999999999999999 99999999999999999999999999999 799999999
Q ss_pred c-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCC-----CCCHHHHHHHHHHHHHHCC
Q psy8199 834 L-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-----ILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 834 l-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~-----~~~~~~~~~~ia~~R~~lp 894 (965)
+ ++|.+++.++++.+.+++ |+.|+++.|.-.|+|++.... .++.++.+.+.......+-
T Consensus 198 lP~QT~~~~~~~l~~a~~l~--pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~ 262 (416)
T COG0635 198 LPGQTLESLKEDLEQALELG--PDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLE 262 (416)
T ss_pred CCCCCHHHHHHHHHHHHhCC--CCEEEEeeeecCCCchhhhhcccCCCCcChHHHHHHHHHHHHHHH
Confidence 9 699999999999999999 999999999999999987532 3566666777777666664
No 368
>PF04055 Radical_SAM: Radical SAM superfamily; InterPro: IPR007197 Radical SAM proteins catalyze diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. Evidence exists that these proteins generate a radical species by reductive cleavage of S:-adenosylmethionine (SAM) through an unusual Fe-S centre [, ].; GO: 0003824 catalytic activity, 0051536 iron-sulfur cluster binding; PDB: 2A5H_D 3T7V_A 3C8F_A 3CB8_A 2FB2_A 2FB3_A 3CIX_A 3IIX_A 3IIZ_A 3CIW_A ....
Probab=99.61 E-value=8.6e-15 Score=145.08 Aligned_cols=160 Identities=21% Similarity=0.359 Sum_probs=119.8
Q ss_pred EeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHH-HHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcC
Q psy8199 685 LSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKA-KSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIG 763 (965)
Q Consensus 685 i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~-~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~ 763 (965)
|++ |++|+++|.||..... ........++++++++.++++ .+.|...+.++ |++|+...+...++..+......+
T Consensus 1 i~~-~~~C~~~C~fC~~~~~--~~~~~~~~~~~e~i~~~~~~~~~~~~~~~i~~~-~gep~~~~~~~~~~~~~~~~~~~~ 76 (166)
T PF04055_consen 1 IET-TRGCNLNCSFCYYPRS--RRKNKPREMSPEEILEEIKELKQDKGVKEIFFG-GGEPTLHPDFIELLELLRKIKKRG 76 (166)
T ss_dssp EEE-ESEESS--TTTSTTTT--CCTCGCEECHHHHHHHHHHHHHHHTTHEEEEEE-SSTGGGSCHHHHHHHHHHHCTCTT
T ss_pred CEE-CcCcCccCCCCCCCcc--CCCcccccCCHHHHHHHHHHHhHhcCCcEEEEe-ecCCCcchhHHHHHHHHHHhhccc
Confidence 345 8999999999997753 112234458999999999999 58886666664 545655544444444444332124
Q ss_pred c--EeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHH-HHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec-CCCH
Q psy8199 764 L--ETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPK-LYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESR 838 (965)
Q Consensus 764 ~--~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~-~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl-~et~ 838 (965)
. .+.++....+++.++.|+++|++.+.++++| +++ ..+.+.+..++++++++++.++++|++....+++|+ ++|.
T Consensus 77 ~~i~~~t~~~~~~~~~l~~l~~~~~~~i~~~l~s~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~i~~~~~~~~ 156 (166)
T PF04055_consen 77 IRISINTNGTLLDEELLDELKKLGVDRIRISLESLDEESVLRIINRGKSFERVLEALERLKEAGIPRVIIFIVGLPGEND 156 (166)
T ss_dssp EEEEEEEESTTHCHHHHHHHHHTTCSEEEEEEBSSSHHHHHHHHSSTSHHHHHHHHHHHHHHTTSETEEEEEEEBTTTSH
T ss_pred cceeeeccccchhHHHHHHHHhcCccEEecccccCCHHHhhhhhcCCCCHHHHHHHHHHHHHcCCCcEEEEEEEeCCCCH
Confidence 4 4455666667999999999999999999999 888 777777889999999999999999998566667777 7999
Q ss_pred HHHHHHHHHH
Q psy8199 839 DQRAELIFQL 848 (965)
Q Consensus 839 ed~~~~l~~l 848 (965)
+|+.++++++
T Consensus 157 ~e~~~~~~~i 166 (166)
T PF04055_consen 157 EEIEETIRFI 166 (166)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhCcC
Confidence 9999999875
No 369
>KOG0633|consensus
Probab=99.60 E-value=4.9e-14 Score=137.70 Aligned_cols=287 Identities=16% Similarity=0.154 Sum_probs=193.3
Q ss_pred HHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhccc
Q psy8199 300 IKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSL 379 (965)
Q Consensus 300 ~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~ 379 (965)
.+++..+++..|...+.+....|..|.+++.||+.+. +|+++|+...++|..++..+....
T Consensus 72 k~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~-------PGkeKIl~cPPtysMY~v~A~iNd------------ 132 (375)
T KOG0633|consen 72 KRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCD-------PGKEKILDCPPTYSMYVVDAAIND------------ 132 (375)
T ss_pred chhhhhcccCCCCCccceEEecCcHHHHHHHHhheec-------CCccceeecCCcceeEEEEeecCC------------
Confidence 4566666666776778999999999999999998877 799999999999988765443322
Q ss_pred CCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeE
Q psy8199 380 LNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHL 459 (965)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 459 (965)
.+++.+|...++. .+.+++.+.++. .+.+.++++.+ +.|++|.+. ..+.+..|-+.-+ +.++
T Consensus 133 -~eVvkvpl~pdF~------------lnvdai~evl~~-ds~iK~~F~tS-PgNPtg~~i-k~~di~KiLe~p~--nglV 194 (375)
T KOG0633|consen 133 -AEVVKVPLNPDFS------------LNVDAIAEVLEL-DSKIKCIFLTS-PGNPTGSII-KEDDILKILEMPD--NGLV 194 (375)
T ss_pred -ceEEEecCCCCcc------------ccHHHHHHHHhc-cccceEEEEcC-CCCCCcccc-cHHHHHHHHhCCC--CcEE
Confidence 2456666543322 357777777764 34567666666 589999877 4555666655544 7999
Q ss_pred EEeccccCCCcccccccccccCCCccee---eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHH
Q psy8199 460 IADEIAVGCGRTGKFFACEHAEIWPDFL---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACC 536 (965)
Q Consensus 460 I~DEv~tg~gr~G~~~~~~~~~~~pDiv---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~a 536 (965)
++||+|-.| +|......+..--|+++ ||||++|-.++++|+...+.++++.+.. .-..|+.+.++-.
T Consensus 195 VvDEAYidF--sg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~--------~KaPYNiS~~~s~ 264 (375)
T KOG0633|consen 195 VVDEAYIDF--SGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNR--------AKAPYNISVAGSV 264 (375)
T ss_pred EEeeeeEee--ccccccchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHh--------ccCCccccchhHH
Confidence 999999887 44333333334458887 5899666533899999999999988865 2356777777777
Q ss_pred HHHHHHH--HHh-cccHHHHHHHHHHHHHHHHHcccCCCceee--eeceeEEEEEEEeecCccchhhHHHHH-HHHHHHc
Q psy8199 537 AALATLE--IFN-KDNILQRISQDMKKITKALTSLITHPKIIN--FRQKGMIWAFDVIIEDPEQIETFSKKF-FVAALKN 610 (965)
Q Consensus 537 aa~a~L~--~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~--v~g~G~~~~i~~~~~~~~~~~~~~~~~-~~~l~~~ 610 (965)
+|+++|. .+. -++..+.+.+...+|...|.++ |.+.. -....+|+.+++..++ ...+..+ .+.+..+
T Consensus 265 ~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v---~~~~~~~gg~daNFiLi~v~~~~----n~~akkly~q~at~~ 337 (375)
T KOG0633|consen 265 AALAALSDSNGKKMEDVRDAIVRERERLFKELTEV---PFLNDYPGGSDANFILIEVTGGD----NGMAKKLYKQDATKM 337 (375)
T ss_pred HHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcC---ccccCCCCcccccEEEEEEcCCC----cHHHHHHHHHHHHhc
Confidence 8888775 111 1234455555566666666655 33332 2335678888876222 2234444 4455688
Q ss_pred CcEEeecC------CEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 611 ELLLRPIG------NTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 611 Gi~~~~~~------~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
||.++-.| +.+|++ ..++|+-.-+++.+++
T Consensus 338 gVvVRfrgse~~c~G~lRit---vGt~EentvL~k~~K~ 373 (375)
T KOG0633|consen 338 GVVVRFRGSEEGCKGYLRIT---VGTPEENTVLMKCLKQ 373 (375)
T ss_pred ceEEEEcCCccccceeEEEE---cCCcccchHHHHHHHh
Confidence 99998643 689999 6677777766666543
No 370
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.60 E-value=5.3e-14 Score=158.04 Aligned_cols=240 Identities=15% Similarity=0.150 Sum_probs=163.9
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
..+.++...+|+++++++.+ .+.+++++||++|+..+++.... ++++|++....|++........
T Consensus 35 ~r~~~p~~~~le~~la~l~g--~~~a~~~~sG~~Ai~~~l~~l~~--------~gd~Vl~~~~~y~~~~~~~~~~----- 99 (369)
T cd00614 35 SRIGNPTVDALEKKLAALEG--GEAALAFSSGMAAISTVLLALLK--------AGDHVVASDDLYGGTYRLFERL----- 99 (369)
T ss_pred ECCCChhHHHHHHHHHHHHC--CCCEEEEcCHHHHHHHHHHHHcC--------CCCEEEECCCCcchHHHHHHHH-----
Confidence 45678889999999999985 46788899999999999987643 5678999888887752111000
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
.......+.+++. .|+++++++++ +++.+|++|+ ++|++|.+.+ +++|.++
T Consensus 100 ----~~~~g~~~~~v~~-----------------~d~~~l~~~i~---~~~~~v~~e~-~~np~g~~~d----l~~i~~l 150 (369)
T cd00614 100 ----LPKLGIEVTFVDP-----------------DDPEALEAAIK---PETKLVYVES-PTNPTLKVVD----IEAIAEL 150 (369)
T ss_pred ----HhhcCeEEEEeCC-----------------CCHHHHHHhcC---CCCeEEEEEC-CCCCCCeecC----HHHHHHH
Confidence 0011112333332 25678888775 3578899998 8999998887 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCc-ccceeeeecH-HHHHhhhccCCcccccccCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGY-LPLSLVMTTD-KIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~-~pig~v~~~~-~i~~~~~~~~~~~~~~~~~t 527 (965)
|++||+++|+|+++.. +.. .......+|++ +++|.++|.. ...|++++++ ++++.+... ....+
T Consensus 151 a~~~g~~livD~t~~~-~~~-----~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~------~~~~g 218 (369)
T cd00614 151 AHEHGALLVVDNTFAT-PYL-----QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFL------RLALG 218 (369)
T ss_pred HHHcCCEEEEECCCcc-hhc-----CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHH------HHhhC
Confidence 9999999999999852 211 11123356887 6789998632 4678888877 787777641 11123
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccC-----CCcee----------eeeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~i~----------~v~g~G~~~~i~~~ 589 (965)
...+|..+++++..|+.+. ...++..++.+++.+.|++... +|++. ...+.|.++.|++.
T Consensus 219 ~~~~p~~a~~~l~~l~tl~--~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 219 TILSPFDAWLLLRGLKTLP--LRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred CCCCHHHHHHHHcCCCCHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 3467888887777775443 2466777788888888876531 33221 12467899999985
No 371
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.60 E-value=1.5e-13 Score=154.02 Aligned_cols=309 Identities=14% Similarity=0.033 Sum_probs=177.3
Q ss_pred HHHHHHHHHhhc-cccccCCCCcHHHHHHHHHHHhhcCCC--CCeEEEcCChhHHHHHHHHHHHHHHHh----cC-CCCc
Q psy8199 275 INKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQYK--LGHCFYGSDGASAVEVALKMSFHYWYN----KG-FLNK 346 (965)
Q Consensus 275 v~~av~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~--~~~v~~~~sGseA~~~Al~~a~~~~~~----~g-~~~~ 346 (965)
+.+.+...++.. ..+.......+...+++++++++++.+ ...++|++||++|+..++.+++..... .+ .++.
T Consensus 15 ~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~ 94 (345)
T cd06450 15 LLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGID 94 (345)
T ss_pred HHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccC
Confidence 444554444432 222223344566677888888887643 347999999999999999988753211 00 1122
Q ss_pred eEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCcEE
Q psy8199 347 KKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIA 423 (965)
Q Consensus 347 ~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a 423 (965)
+.+|+....+|.+...+.... ...+..+|..... . .|+++|++++.+. +.++.
T Consensus 95 ~~~v~~~~~~h~~~~~~~~~~------------g~~~~~v~~~~~~-~-----------~d~~~l~~~i~~~~~~~~~~~ 150 (345)
T cd06450 95 KLVIVCSDQAHVSVEKAAAYL------------DVKVRLVPVDEDG-R-----------MDPEALEAAIDEDKAEGLNPI 150 (345)
T ss_pred CeEEEEcCcchhHHHHHHHHH------------hcCeEEeeeCCCC-C-----------cCHHHHHHHHHHHHHCCCCcE
Confidence 335555555555422222111 1234444432211 1 3788888888641 22344
Q ss_pred EEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC-Cccee--eeccccCCCcccc
Q psy8199 424 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFL--CLSKGITGGYLPL 500 (965)
Q Consensus 424 aii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~-~pDiv--t~sK~l~gG~~pi 500 (965)
+|++.- +++++|.+.+ +++|.++|++||+++|+|++|.++............++ ..|.+ +++|.++++ .++
T Consensus 151 ~v~~~~-~~~~tG~~~~----~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p-~g~ 224 (345)
T cd06450 151 MVVATA-GTTDTGAIDP----LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVP-LGC 224 (345)
T ss_pred EEEEec-ccCCCCCCCC----HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCC-cch
Confidence 444443 4778898766 89999999999999999999975421111000001111 35755 467977665 466
Q ss_pred eeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeee-ec
Q psy8199 501 SLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINF-RQ 579 (965)
Q Consensus 501 g~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-~g 579 (965)
|+++.+ .+++.+++..+....-++..++..++.+++.+.|+++ +++..+ .+
T Consensus 225 g~~~~~-------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~ 276 (345)
T cd06450 225 SAVLVR-------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRAD---PGFELLGEP 276 (345)
T ss_pred HHHHHH-------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCC
Confidence 655444 2333333333322111345667777788888877665 344322 24
Q ss_pred eeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----CCEEEEeCCccc-CHHHHHHHHHhhhc
Q psy8199 580 KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYIL-NKNEIQHMTSAIFQ 643 (965)
Q Consensus 580 ~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~lR~~p~~~~-t~~~i~~~~~~l~~ 643 (965)
.+.++.+.+. .+. ........+.+.|.++|+++.+. +.++|+++...+ +.++++++++.+.+
T Consensus 277 ~~~iv~f~~~-~~~-~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 277 NLSLVCFRLK-PSV-KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ceeEEEEEEC-Ccc-hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 5667777664 110 00112346888899997554431 358999988765 99999999988754
No 372
>TIGR02668 moaA_archaeal probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666).
Probab=99.60 E-value=5.3e-14 Score=153.55 Aligned_cols=200 Identities=19% Similarity=0.267 Sum_probs=150.8
Q ss_pred CCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHH
Q psy8199 676 ANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENM 755 (965)
Q Consensus 676 g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~ 755 (965)
|..+.. ..+++ |+.|+.+|.||....... ...+.++.|++.+.++.+.+.|++.|.|+||+ |+...+ +.++
T Consensus 6 gr~~~~-l~i~v-T~~CNl~C~yC~~~~~~~---~~~~~ls~eei~~~i~~~~~~gi~~I~~tGGE-Pll~~~---l~~i 76 (302)
T TIGR02668 6 GRPVTS-LRISV-TDRCNLSCFYCHMEGEDR---SGGNELSPEEIERIVRVASEFGVRKVKITGGE-PLLRKD---LIEI 76 (302)
T ss_pred CCccCe-EEEEE-cccccCCCCCCCccccCC---CccCcCCHHHHHHHHHHHHHcCCCEEEEECcc-cccccC---HHHH
Confidence 555432 35667 999999999997653211 12345899999999988888999999998765 666544 4556
Q ss_pred HHHHHhcCc-EeEE-ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCc-eeeeEE
Q psy8199 756 ICEVKKIGL-ETCL-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGGI 831 (965)
Q Consensus 756 ~~~i~~~~~-~i~~-~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~-v~~~~i 831 (965)
++.+++.++ .+++ ++|.+..+.++.|+++|++.+++++++ +++.++.+.+..++++.+++++.++++|+. +...++
T Consensus 77 v~~l~~~g~~~v~i~TNG~ll~~~~~~l~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~vl~~i~~~~~~G~~~v~i~~v 156 (302)
T TIGR02668 77 IRRIKDYGIKDVSMTTNGILLEKLAKKLKEAGLDRVNVSLDTLDPEKYKKITGRGALDRVIEGIESAVDAGLTPVKLNMV 156 (302)
T ss_pred HHHHHhCCCceEEEEcCchHHHHHHHHHHHCCCCEEEEEecCCCHHHhhhccCCCcHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 666666555 4433 456666889999999999999999999 899999999988999999999999999996 877777
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCC-CCCCCCCCCHHHHHHHHH
Q psy8199 832 IGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGT-PLYGSSILDPLEFIRTIA 887 (965)
Q Consensus 832 ~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT-~l~~~~~~~~~~~~~~ia 887 (965)
+-.|++.+++.+.++++++++ . .+.+..++|.... ........+..++...+.
T Consensus 157 ~~~g~n~~ei~~~~~~~~~~g--~-~~~~ie~~p~~~~~~~~~~~~~~~~~i~~~l~ 210 (302)
T TIGR02668 157 VLKGINDNEIPDMVEFAAEGG--A-ILQLIELMPPGEGEKEFKKYHEDIDPIEEELE 210 (302)
T ss_pred EeCCCCHHHHHHHHHHHHhcC--C-EEEEEEEeECCCCccchhhceecHHHHHHHHH
Confidence 655799999999999999998 4 4677777886532 222223345566555543
No 373
>PRK14012 cysteine desulfurase; Provisional
Probab=99.59 E-value=2.5e-13 Score=155.11 Aligned_cols=332 Identities=12% Similarity=0.115 Sum_probs=192.1
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHh--h-cccccc----CCC-CcHHHHHHHHHHHhhcCCCCCeEEEcCChhH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLN--K-LEHVML----SNL-THKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 325 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~--~-~~~~~~----~~~-~~~~~~~la~~l~~~~~~~~~~v~~~~sGse 325 (965)
+.|+|..+. +..++.+.+++.+.+. . ....+. ..+ ..+...++.+.++++++.+.+.++|++|||+
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 468897664 3368999999988775 2 111100 000 1234567788899999866778999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|+..+++.+..... .+++.|++.+..|+.. ..+.... ......+.+++.+.. +.
T Consensus 78 al~~~l~~l~~~~~----~~gd~Vi~~~~~~~s~-~~~~~~~---------~~~g~~~~~v~~~~~-g~----------- 131 (404)
T PRK14012 78 SDNLAIKGAAHFYQ----KKGKHIITSKTEHKAV-LDTCRQL---------EREGFEVTYLDPQSN-GI----------- 131 (404)
T ss_pred HHHHHHHHHHHhhc----CCCCEEEEecCccHHH-HHHHHHH---------HhCCCEEEEEccCCC-Cc-----------
Confidence 99999987643210 2456777776665443 1111100 000112344443321 11
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcc
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 485 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pD 485 (965)
.|+++|++++. .++.+|++.. +++++|.+.+ +++|.++|+++|+++|+|++|+ +|.. ........+|
T Consensus 132 ~d~~~l~~~i~---~~t~lv~~~~-~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~----~~~~~~~~~D 198 (404)
T PRK14012 132 IDLEKLEAAMR---DDTILVSIMH-VNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKV----PIDLSKLKVD 198 (404)
T ss_pred CCHHHHHHhcC---CCCEEEEEEC-cCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCc----ccCcccCCCC
Confidence 26788888885 3456777777 7899998887 8999999999999999999996 4432 1112234589
Q ss_pred eeeec--cccCCCcccceeeeecHHHHHhhhc---cCC-cccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHH
Q psy8199 486 FLCLS--KGITGGYLPLSLVMTTDKIYNSIYY---KNN-INIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQD 557 (965)
Q Consensus 486 ivt~s--K~l~gG~~pig~v~~~~~i~~~~~~---~~~-~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~ 557 (965)
++++| |.++. .++|+++++++....+.. ++. ...+ ..+| .+.....+..++++.+.. +...++.+++
T Consensus 199 ~~~~s~~K~~gp--~g~G~l~~~~~~~~~~~~~~~g~~~~~~~-~~gt--~~~~~~~~l~~al~~~~~~~~~~~~~~~~l 273 (404)
T PRK14012 199 LMSFSAHKIYGP--KGIGALYVRRKPRVRLEAQMHGGGHERGM-RSGT--LPTHQIVGMGEAARIAKEEMATENERIRAL 273 (404)
T ss_pred EEEEehhhccCC--CceEEEEEecCCCCCCCceecCCCccCCc-cCCC--cCHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99887 95543 357888887654322211 000 0001 1122 233333344455554432 3355667777
Q ss_pred HHHHHHHHHcccCCCceeee-----eceeE-EEEEEEeecCccchhhHHHHHHHHHHHcCcEE----ee-----------
Q psy8199 558 MKKITKALTSLITHPKIINF-----RQKGM-IWAFDVIIEDPEQIETFSKKFFVAALKNELLL----RP----------- 616 (965)
Q Consensus 558 ~~~l~~~L~~l~~~~~i~~v-----~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~----~~----------- 616 (965)
.+++.+.|+++ +++... +..+. .+.+... + ...+...+.+.+|-. .+
T Consensus 274 ~~~l~~~L~~~---~~i~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~ 341 (404)
T PRK14012 274 RDRLWNGIKDI---EEVYLNGDLEQRVPGNLNVSFNYV--E-------GESLIMALKDLAVSSGSACTSASLEPSYVLRA 341 (404)
T ss_pred HHHHHHHHhcC---CCEEEeCCccccCCCEEEEEEeCc--C-------HHHHHHhCCCeEEEchhhhCCCCCCCCHHHHH
Confidence 77777777654 333211 11111 2232221 1 112333332222111 11
Q ss_pred -------cCCEEEEeCCcccCHHHHHHHHHhhhccccc
Q psy8199 617 -------IGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 617 -------~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~ 647 (965)
..+.+|++++...++++++.+++.+.+....
T Consensus 342 ~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~ 379 (404)
T PRK14012 342 LGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGK 379 (404)
T ss_pred cCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 1268999999999999999999998875443
No 374
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.58 E-value=2.9e-13 Score=152.25 Aligned_cols=350 Identities=14% Similarity=0.138 Sum_probs=194.6
Q ss_pred cCCcccccccccchhccCCCCCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHH
Q psy8199 251 FSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 330 (965)
Q Consensus 251 ~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~A 330 (965)
..|..|||+.+-.+. ..+.+++.+++..... ....++...+|.+.+++.+ +.+++++++||++|+..+
T Consensus 17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~---~Y~~~~g~~~Leeaia~~~--g~~~vv~t~~Gt~Al~la 84 (431)
T cd00617 17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDE---AYAGSKSFYDLEDAVQDLF--GFKHIIPTHQGRGAENIL 84 (431)
T ss_pred CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCC---ccCCCCCHHHHHHHHHHHH--CCCeEEEcCCHHHHHHHH
Confidence 345678999876542 4455555555544321 1233455678889999998 467999999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHH-HHHHH
Q psy8199 331 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA-RCAIF 409 (965)
Q Consensus 331 l~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~ 409 (965)
+.+... +++.| ...+.|..+.......++.+ ++++....... .....+. ..|++
T Consensus 85 ~~al~~--------pGD~V-~~~~~f~~~~~~i~~~Ga~p-------------v~v~i~~~~~~---~~~~pf~gniD~e 139 (431)
T cd00617 85 FSILLK--------PGRTV-PSNMHFDTTRGHIEANGAVP-------------VDLVIDEAHDA---QELIPFKGNIDVA 139 (431)
T ss_pred HHHhCC--------CCCEE-ccCCcccchHHHHHhCCCEe-------------EEEeccccccc---ccccCCCCCcCHH
Confidence 886632 34544 56666655533333333321 22222110000 0000010 13789
Q ss_pred HHHHHHHhC-CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCC----------Cccccccc--
Q psy8199 410 DLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC----------GRTGKFFA-- 476 (965)
Q Consensus 410 ~le~~l~~~-~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~----------gr~G~~~~-- 476 (965)
+|+++|.+. ..++++|+++. .+|++|..+.+.+.+++|+++|++||++||.|+++.-. |..+....
T Consensus 140 ~Le~~I~~~~~~~~~~I~v~~-p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei 218 (431)
T cd00617 140 KLEKLIDEVGAENIPYIVLTI-TNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEI 218 (431)
T ss_pred HHHHHhCcccCCCccEEEEEC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHH
Confidence 999999754 23477777775 57776555668899999999999999999999996411 11111100
Q ss_pred -ccccCCCcceeeec--cccCCCcccce-eeeecH-HHHHhhhccCCcccccccCCCCCCHHHHHHHHH-HHHHHhcccH
Q psy8199 477 -CEHAEIWPDFLCLS--KGITGGYLPLS-LVMTTD-KIYNSIYYKNNINIFLHSHSYSGNPLACCAALA-TLEIFNKDNI 550 (965)
Q Consensus 477 -~~~~~~~pDivt~s--K~l~gG~~pig-~v~~~~-~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a-~L~~~~~~~~ 550 (965)
.+.+. --|..++| |..+ .++| ++++++ ++++.+.... ..+....|++|....+.+|++ +|+...+.+.
T Consensus 219 ~~e~~s-~sd~~~mS~~K~~~---~~~GG~i~~~d~~l~~~~~~~~--~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~ 292 (431)
T cd00617 219 AREMFS-YADGCTMSAKKDGL---VNIGGFLALRDDELYEEARQRV--VLYEGFVTYGGMAGRDMEALAQGLREAVEEDY 292 (431)
T ss_pred HHHhhc-cCCEEEEEeecCCC---CccceEEEeCcHHHHHHHHHhc--cccCCccccccccHHHHHHHHHHHHhcccHHH
Confidence 00011 13444444 3222 2445 677775 5887765311 001111234443333333333 6654222334
Q ss_pred HHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecC-cc-chhh-HHHHHH-HHHHHcCcEEee----------
Q psy8199 551 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIED-PE-QIET-FSKKFF-VAALKNELLLRP---------- 616 (965)
Q Consensus 551 ~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~-~~-~~~~-~~~~~~-~~l~~~Gi~~~~---------- 616 (965)
++...+..++|.+.|++. ++..+.+.|.++.+.....- +. +... -+..++ +.+.+.||.+..
T Consensus 293 l~~~~~~r~~l~~~L~~~----G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~ 368 (431)
T cd00617 293 LRHRVEQVRYLGDRLDEA----GVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDP 368 (431)
T ss_pred HHHHHHHHHHHHHHHHHC----CCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCC
Confidence 444444557788888765 55556666665444332110 00 0000 133454 445577887531
Q ss_pred -c-------CCEEEEeCCc-ccCHHHHHHHHHhhhcccccH
Q psy8199 617 -I-------GNTVYLMPPY-ILNKNEIQHMTSAIFQTFNEL 648 (965)
Q Consensus 617 -~-------~~~lR~~p~~-~~t~~~i~~~~~~l~~~~~~~ 648 (965)
. -+.+|+..|. ..|.++++.+.+.+.......
T Consensus 369 ~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~ 409 (431)
T cd00617 369 NTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred CCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhH
Confidence 1 1579999887 789999998888877655443
No 375
>PRK00955 hypothetical protein; Provisional
Probab=99.58 E-value=7.2e-14 Score=159.42 Aligned_cols=185 Identities=14% Similarity=0.149 Sum_probs=136.3
Q ss_pred EeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC-CCCEEEE-eeccC-CC-------------
Q psy8199 681 LAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD-GATRFCM-GAAWR-EL------------- 744 (965)
Q Consensus 681 ~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~-g~~~i~l-~~g~~-~~------------- 744 (965)
+...|.+ ++||+++|+||+.+.+.++ .++.+++++|+++++.+.+. |++++.. ++|-+ ..
T Consensus 292 i~~sI~i-~RGC~g~CSFCaIp~~rGr---~~rSRs~esIv~Evk~L~~~~gfkg~I~DlgGptan~Yg~~c~~~~~~~~ 367 (620)
T PRK00955 292 VKFSITS-HRGCFGGCSFCAITFHQGR---FIQSRSQESILREAKELTEMPDFKGYIHDVGGPTANFRKMACKKQLKCGA 367 (620)
T ss_pred EEEEEEe-eCCCCCCCCCCCeecccCC---cceecCHHHHHHHHHHHHhccCCeEEEEeCCCCCcccccccccccccccc
Confidence 3456666 9999999999988765343 24568999999999999887 7888742 22210 00
Q ss_pred --------------CcccHHHHHHHHHHHHh-cCc-EeEEecC----C----CCHHHHHHHHHhCCC-eEeccCCC-CHH
Q psy8199 745 --------------KDRDLDNIENMICEVKK-IGL-ETCLTLG----M----LNENQAYRLKKVGLD-YYNHNLDT-SPK 798 (965)
Q Consensus 745 --------------~~~~~~~~~~~~~~i~~-~~~-~i~~~~~----~----~~~e~l~~Lk~aG~~-~i~i~~es-~~~ 798 (965)
...+...+.++++++++ .++ .+.++.| . .+++.++.|.+..+. .+.+++|+ +++
T Consensus 368 c~~~~clfp~~c~nl~~d~~~l~~LLr~l~~l~gvkrv~isSGIR~D~l~~~~~~~~l~eL~~~~vsg~L~IapESgSd~ 447 (620)
T PRK00955 368 CKNKQCLFPKPCKNLDVDHKEYLELLRKVRKLPGVKKVFIRSGIRYDYLLHDKNDEFFEELCEHHVSGQLKVAPEHISDR 447 (620)
T ss_pred ccccccccCccccccCcChHHHHHHHHHHhccCCceEEEeecceeccccccCCcHHHHHHHHHHhcCCCceeCcCCCChH
Confidence 01134578889988887 354 3444333 2 234578888886554 79999999 999
Q ss_pred HHhcccCCCCHHH---HHHH-HHHHHHcCCc--eeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCC
Q psy8199 799 LYGDIISTRDYEN---RLNT-LKNVRNVGIN--ICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPL 871 (965)
Q Consensus 799 ~~~~i~~~~~~~~---~~~~-i~~~~~~Gi~--v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l 871 (965)
+++.|++. +.+. .++. .+.++++|+. +.+.+|+|+ |||.+|+.++++++++++ .+.+.++.|+|.|||+-
T Consensus 448 VLk~M~K~-~~~~~~~f~~~~~~i~~~~G~~~~I~~yfIvGfPGETeEDf~et~eflkel~--~~~~qV~~fTP~PGT~A 524 (620)
T PRK00955 448 VLKLMGKP-SREVYDKFVKKFDRINKKLGKKQYLVPYLMSSHPGSTLEDAIELAEYTKDLG--YQPEQVQDFYPTPGTLS 524 (620)
T ss_pred HHHHhCCC-CHHHHHHHHHHHHHhhhhcCCCccEEEEEEEECCCCCHHHHHHHHHHHHHcC--CCcceeeeeecCCCcch
Confidence 99999986 3333 3332 3456678876 889999999 799999999999999999 89999999999999865
Q ss_pred C
Q psy8199 872 Y 872 (965)
Q Consensus 872 ~ 872 (965)
.
T Consensus 525 t 525 (620)
T PRK00955 525 T 525 (620)
T ss_pred h
Confidence 4
No 376
>PRK01254 hypothetical protein; Provisional
Probab=99.58 E-value=5.9e-14 Score=158.08 Aligned_cols=185 Identities=15% Similarity=0.229 Sum_probs=144.1
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC--CCCEEE--EeeccCCC--------------
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD--GATRFC--MGAAWREL-------------- 744 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~--g~~~i~--l~~g~~~~-------------- 744 (965)
..|.+ ++||+.+|+||+.+.+.++ .++.+|+++|+++++.+.+. |++++. +.|.....
T Consensus 374 ~sV~i-~RGC~g~CSFCaI~~hqGr---~irSRS~esIL~Ea~~L~~~~pGfKgii~DLgGptaN~YG~~c~d~~~~~~C 449 (707)
T PRK01254 374 FSVNI-MRGCFGGCSFCSITEHEGR---IIQSRSEESIINEIEAIRDKVPGFTGVISDLGGPTANMYRLRCKSPRAEQTC 449 (707)
T ss_pred EEEEE-ccCCCCCCCccccccccCC---eeeeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCcccccccccccccccccc
Confidence 45566 9999999999998865443 24568999999999999863 999988 44322111
Q ss_pred -------------CcccHHHHHHHHHHHHh-cCc-EeEEecC------CCCHHHHHHHHHhCCC-eEeccCCC-CHHHHh
Q psy8199 745 -------------KDRDLDNIENMICEVKK-IGL-ETCLTLG------MLNENQAYRLKKVGLD-YYNHNLDT-SPKLYG 801 (965)
Q Consensus 745 -------------~~~~~~~~~~~~~~i~~-~~~-~i~~~~~------~~~~e~l~~Lk~aG~~-~i~i~~es-~~~~~~ 801 (965)
...+...+.++++++++ .|+ .+.+..+ ..+++.++.|.+..+. ++.+.+|+ ++++++
T Consensus 450 ~~~~Cl~P~~C~nL~~dh~~l~eLLrkLr~IpGVKkVrI~SgiR~Dl~l~d~elIeel~~~hV~g~LkVppEH~Sd~VLk 529 (707)
T PRK01254 450 RRLSCVYPDICPHLDTDHEPTINLYRRARDLKGIKKILIASGVRYDLAVEDPRYVKELVTHHVGGYLKIAPEHTEEGPLS 529 (707)
T ss_pred ccccccCcccccccCCCHHHHHHHHHHHHhCCCceEEEEEcCCCccccccCHHHHHHHHHhCCccccccccccCCHHHHH
Confidence 11234578999999987 354 3333222 2268899999988876 88999999 999999
Q ss_pred cccCC--CCHHHHHHHHHHHHH-cC--CceeeeEEEec-CCCHHHHHHHHHHHHhcCCCCCceeeccccccC---CCCCC
Q psy8199 802 DIIST--RDYENRLNTLKNVRN-VG--INICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIK---GTPLY 872 (965)
Q Consensus 802 ~i~~~--~~~~~~~~~i~~~~~-~G--i~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~---gT~l~ 872 (965)
.|+++ .+++++.+.++.+++ .| +.+.+.||+|+ |||.+|+.++++++++++ ...-.++.|+|.| +|.|+
T Consensus 530 ~M~Kp~~~~~e~F~e~f~rirk~~gk~q~LipyfIvGhPGeTeeDf~eLaefLkel~--f~~eQVQ~FTPtP~t~~T~MY 607 (707)
T PRK01254 530 KMMKPGMGSYDRFKELFDKYSKEAGKEQYLIPYFISAHPGTTDEDMVNLALWLKKNR--FRLDQVQNFYPSPMANATTMY 607 (707)
T ss_pred HhCCCCcccHHHHHHHHHHHHHHCCCCeEEEEeEEEECCCCCHHHHHHHHHHHHHhC--CCcceeeeeecCCCcCchHHH
Confidence 99987 688999999999876 45 45667999998 899999999999999999 7888888999999 78777
Q ss_pred C
Q psy8199 873 G 873 (965)
Q Consensus 873 ~ 873 (965)
.
T Consensus 608 y 608 (707)
T PRK01254 608 Y 608 (707)
T ss_pred h
Confidence 4
No 377
>COG1032 Fe-S oxidoreductase [Energy production and conversion]
Probab=99.58 E-value=2e-14 Score=169.55 Aligned_cols=196 Identities=20% Similarity=0.291 Sum_probs=145.1
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccC-CCCcc--cHHHHHHHHH-
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWR-ELKDR--DLDNIENMIC- 757 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~-~~~~~--~~~~~~~~~~- 757 (965)
...+++ ++|||++|.||+.+..+ .++.++++.++++++...+.|.+.+.+..+.. ..... ..+...+.+.
T Consensus 199 ~~~ve~-~RGCp~~C~FC~~~~~~-----~~r~~~~~~v~~ei~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~ 272 (490)
T COG1032 199 AFSVET-SRGCPRGCRFCSITKHF-----KYRRRRPERVVEEIKELIEEGGKRVVFFVDDIFLYGSPALNDEKRFELLSL 272 (490)
T ss_pred EEEEEe-ccCCCCCCCCCCCcccc-----cccCCCHHHHHHHHHHHHHHhhhcCcccccceeecCCccccchhhcccchH
Confidence 466777 99999999999977643 24557899999999888887766644222111 10010 1122222222
Q ss_pred HHHhcC------cEeE---EecCCCC-HHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHH-HHHHHHHcCCc
Q psy8199 758 EVKKIG------LETC---LTLGMLN-ENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLN-TLKNVRNVGIN 825 (965)
Q Consensus 758 ~i~~~~------~~i~---~~~~~~~-~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~-~i~~~~~~Gi~ 825 (965)
.+.+.. ..+. .....++ ++.++.++++|..++.+|+|| +++.++.+.++++.++.++ +++.+++.|+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~d~~~~~~~~~~~~~~g~~~~~iG~Esgs~~~l~~~~k~~~~~~~~~~a~~~~~~~~~~ 352 (490)
T COG1032 273 ELIERGLRKGCRVHISAPSLRADTVTDEELLKLLREAGLRRVYIGIESGSEELLKKINKGITTEEVLEEAVKIAKEHGLR 352 (490)
T ss_pred HHHHHhcccCceeeeeccccCchhcCHHHHHHHHhhCCCcceEEeccCCCHHHHHHHhCCCChHHHHHHHHHHHHhCCce
Confidence 222211 1222 3456676 999999999999999999999 9999999999999999995 99999999999
Q ss_pred eeeeEEEec-CCCHHHHHHH---HHHHHhcCCCCC-ceeeccccccCCCCCCCCCCCCHHHHHHH
Q psy8199 826 ICCGGIIGL-SESRDQRAEL---IFQLANLNPYPE-SVPINNLVQIKGTPLYGSSILDPLEFIRT 885 (965)
Q Consensus 826 v~~~~i~Gl-~et~ed~~~~---l~~l~~l~~~~~-~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ 885 (965)
+..++|+|+ |||.+|..++ ++.+.+++ .. .+.++.|+|.|+|+++...........+.
T Consensus 353 ~~~~~i~G~pget~ed~~~t~~~~~~~~~~~--~~~~~~~~~~~p~p~t~~~~~~~~~~~~~~~~ 415 (490)
T COG1032 353 VKLYFIVGLPGETEEDVKETIELAKFIKKLG--PKLYVSPSPFVPLPGTPLQEMPKLENELLKRR 415 (490)
T ss_pred eeEEEEEcCCCCCHHHHHHHHHHHHHHHHhC--ccceEEEeeeeCCCCCchhhcccccchhhhhh
Confidence 999999999 6999999998 67777777 54 79999999999999998765444433333
No 378
>PLN02242 methionine gamma-lyase
Probab=99.57 E-value=1.1e-13 Score=156.58 Aligned_cols=257 Identities=12% Similarity=0.095 Sum_probs=163.5
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
++.+.++...+|+++++++. +.+.+++++||++|+..++....+ ++++|++.++.|.++.........
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~--g~~~~l~~~sG~~Ai~~al~al~~--------~GD~Vl~~~~~Y~~~~~~~~~~~~-- 137 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALE--GTEAAYCTASGMSAISSVLLQLCS--------SGGHVVASNTLYGGTHALLAHFLP-- 137 (418)
T ss_pred ccCCCChhHHHHHHHHHHHh--CCCeEEEEccHHHHHHHHHHHHhC--------CCCEEEEcCCcHHHHHHHHHHhhh--
Confidence 34567889999999999998 467888999999999999987643 568899888887554211000000
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
........+++. .|++++++++++ .++.+|++|. ++|++|.+.+ +++|.+
T Consensus 138 ------~~~G~~~~~~d~-----------------~d~e~l~~~i~~--~~tklV~les-p~NPtG~v~d----l~~I~~ 187 (418)
T PLN02242 138 ------RKCNITTTFVDI-----------------TDLEAVKKAVVP--GKTKVLYFES-ISNPTLTVAD----IPELAR 187 (418)
T ss_pred ------hccCceEEEcCC-----------------CCHHHHHHhcCc--CCCEEEEEec-CCCCCCcccC----HHHHHH
Confidence 000111222221 267888888752 2467888888 8999998876 999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccc-eeeeecHHHHHhhhccCCccccccc--
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHS-- 525 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pi-g~v~~~~~i~~~~~~~~~~~~~~~~-- 525 (965)
+|++||+++|+||+|+.+. .. ...+| .|++ +|||.++|+.+++ |++++++++++.+.. +..+
T Consensus 188 la~~~gi~livDea~~~~~-~~----~~~~g--~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~------~~~~~~ 254 (418)
T PLN02242 188 IAHEKGVTVVVDNTFAPMV-LS----PARLG--ADVVVHSISKFISGGADIIAGAVCGPAELVNSMMD------LHHGAL 254 (418)
T ss_pred HHHHhCCEEEEECCCCccC-CC----HHHcC--CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHH------Hhhhhh
Confidence 9999999999999996442 21 11223 5666 6899998755674 888889988887764 1111
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc---CCCceee----------e---eceeEEEEEEEe
Q psy8199 526 HSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI---THPKIIN----------F---RQKGMIWAFDVI 589 (965)
Q Consensus 526 ~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~---~~~~i~~----------v---~g~G~~~~i~~~ 589 (965)
..++..+..+.|++..+..-.-+...++.+++.+++.+.|++.. .+|++.. . .|.|.|++|++.
T Consensus 255 ~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~ 334 (418)
T PLN02242 255 MLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD 334 (418)
T ss_pred hccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC
Confidence 12223333444444443211112245677788888888887651 2333211 1 367889999985
Q ss_pred ecCccchhhHHHHHHHHHH
Q psy8199 590 IEDPEQIETFSKKFFVAAL 608 (965)
Q Consensus 590 ~~~~~~~~~~~~~~~~~l~ 608 (965)
+ ...+.+|.+.+.
T Consensus 335 --~----~~~~~~f~~~l~ 347 (418)
T PLN02242 335 --T----EERANRLMRYLQ 347 (418)
T ss_pred --C----HHHHHHHHHHhh
Confidence 2 223445555554
No 379
>PF06968 BATS: Biotin and Thiamin Synthesis associated domain; InterPro: IPR010722 Biotin synthase (BioB), 2.8.1.6 from EC, catalyses the last step of the biotin biosynthetic pathway. The reaction consists in the introduction of a sulphur atom into dethiobiotin. BioB functions as a homodimer []. Thiamin synthesis if a complex process involving at least six gene products (ThiFSGH, ThiI and ThiJ). Two of the proteins required for the biosynthesis of the thiazole moiety of thiamine (vitamin B(1)) are ThiG and ThiH (this entry) and form a heterodimer[]. Both of these reactions are thought of involve the binding of co-factors, and both function as dimers [, ]. This domain therefore may be involved in co-factor binding or dimerisation.; GO: 0051536 iron-sulfur cluster binding, 0051186 cofactor metabolic process; PDB: 1R30_A 3CIX_A 3IIX_A 3IIZ_A 3CIW_A.
Probab=99.56 E-value=5e-15 Score=128.58 Aligned_cols=93 Identities=39% Similarity=0.644 Sum_probs=73.3
Q ss_pred eeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEeeCCccccCCCCCCh
Q psy8199 859 PINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTN 938 (965)
Q Consensus 859 ~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~ 938 (965)
|++.|.|.+|||+++.++.++++++|+++++|+++|+..|+++++++....+.+..++.+|||++++|++++|+++++.+
T Consensus 1 pin~l~P~~Gtpl~~~~~l~~~e~lr~ia~~Rl~~P~a~I~la~gr~~~~~~~~~~~~~sg~n~~~~G~ylt~~g~~~~~ 80 (93)
T PF06968_consen 1 PINFLRPIPGTPLEDPPPLSDEEFLRIIAAFRLLLPEAGIRLAGGREALLRDLQPLTFMSGANSIMVGGYLTTSGNRSVD 80 (93)
T ss_dssp EEEE----TTSTTTTS----HHHHHHHHHHHHHHSTTSEEEEECCHHHCSCCHHHHHHCCT--EEE-CSBTSSSCTSHHH
T ss_pred CeeeEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCcceEeecCccccCHHHHHHHHhcccceeEECCccccCCCCCHH
Confidence 45668999999999999999999999999999999999999999998776778889999999999999987666658999
Q ss_pred hhHHHHHHcCCCc
Q psy8199 939 DDSKLLKKLGINT 951 (965)
Q Consensus 939 ~~~~~~~~~g~~~ 951 (965)
++.+||+++|+.|
T Consensus 81 ~d~~~i~~lG~~P 93 (93)
T PF06968_consen 81 EDIEMIEKLGLEP 93 (93)
T ss_dssp HHHHHHHHTT-ES
T ss_pred HHHHHHHHcCCCC
Confidence 9999999999976
No 380
>KOG1358|consensus
Probab=99.56 E-value=7e-14 Score=144.82 Aligned_cols=335 Identities=19% Similarity=0.174 Sum_probs=220.5
Q ss_pred EecCCcccccccccchhccCCCC-CHHHHHHHHHHHhhccccc--c--CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCCh
Q psy8199 249 ITFSGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHVM--L--SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDG 323 (965)
Q Consensus 249 ~d~dG~~ylD~~~~~~~~~lGh~-~p~v~~av~~~~~~~~~~~--~--~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sG 323 (965)
+..||+.++++.|. +.||.. ++++.+.+...+.+++-.+ + +.++-+...++.++|++..+ .+..+.-+-|
T Consensus 89 ~~i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G--~E~aivYs~g 163 (467)
T KOG1358|consen 89 VTIDGKDVLNFASA---NFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG--TEDAIVYSYG 163 (467)
T ss_pred eEecCceeecccch---hhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC--Ccceeeeccc
Confidence 34799999999886 667765 8999999999998864321 1 23566778899999999995 4544444557
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHH
Q psy8199 324 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 403 (965)
Q Consensus 324 seA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (965)
-.++..++.+. +++..|++.+..-+-...-++.++. ..+.+ |
T Consensus 164 F~ti~S~ipaf---------sKrGDIi~~de~~nfaIq~GlqlSR------------S~i~~-----------------F 205 (467)
T KOG1358|consen 164 FSTIESAIPAF---------SKRGDIIFVDEAVNFAIQKGLQLSR------------STISY-----------------F 205 (467)
T ss_pred cchhhhcchhh---------hccCcEEEEehhhhHHHHHHHhhhh------------heeEE-----------------e
Confidence 88888888876 3567777776544322111111111 11111 1
Q ss_pred HHHHHHHHHHHHHhCC----------CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc
Q psy8199 404 ARCAIFDLEILLKKNH----------NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 473 (965)
Q Consensus 404 ~~~d~~~le~~l~~~~----------~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~ 473 (965)
.+||+++||+.+.+.. .....|++|. +..++|.+.| +.+|.++..||..-+|+||..+ ||-.|+
T Consensus 206 khndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EG-l~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~S-fG~lg~ 279 (467)
T KOG1358|consen 206 KHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEG-LYANTGDICP----LPEIVKLKNKYKFRVILDESLS-FGVLGK 279 (467)
T ss_pred cCCCHHHHHHhccCcchhhhhccccccceEEEEEEe-eccCCCcccc----cHHHHHHHhhheEEEEEecccc-cccccc
Confidence 2268888887774432 1256899999 8999999998 8999999999999999999997 776665
Q ss_pred --cccccccCCC---cceeeecc--ccCCCcccceeeeecHHHHHhhhccCCcccccccCCC--CCCHHHHHHHHHHHHH
Q psy8199 474 --FFACEHAEIW---PDFLCLSK--GITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY--SGNPLACCAALATLEI 544 (965)
Q Consensus 474 --~~~~~~~~~~---pDivt~sK--~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~L~~ 544 (965)
.+..+|+++. .|+++.|- +++.|+ |.++|+.-+++.-+-. ..++-| +-+|....||..++++
T Consensus 280 ~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~~hQrLS------g~~Y~fSAslPp~la~aa~~ai~i 350 (467)
T KOG1358|consen 280 TGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIADHQRLS------GSGYCFSASLPPYLAGAAIKAILI 350 (467)
T ss_pred cCccccccCCCCccceeeeeecccccccccC---ceeecceeeEeeeecc------ccceeeeccCchhhhhhHHHHHHH
Confidence 4678899885 46666543 565432 4555654444322211 122223 3467788888899988
Q ss_pred Hhc-ccHHHHHHHHHHHHHHHHHcccCCCcee-eeeceeEEEEEEEeecCccc--hhhHHHHHHHHHHHcCcEEee----
Q psy8199 545 FNK-DNILQRISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIEDPEQ--IETFSKKFFVAALKNELLLRP---- 616 (965)
Q Consensus 545 ~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~i~-~v~g~G~~~~i~~~~~~~~~--~~~~~~~~~~~l~~~Gi~~~~---- 616 (965)
++. ++..+.++.....+...|... .++. .-.....++.+.+...+++. ...+.+++.+.+..+|+++..
T Consensus 351 ~~~~p~~~~~L~~k~~~~H~~l~~~---s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~ 427 (467)
T KOG1358|consen 351 EEWNPEIVQPLRAKVAKFHAALSSN---SGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYL 427 (467)
T ss_pred HhhCcchhhhhhccccccchhhhcC---CceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhh
Confidence 764 557777887777777777653 1111 11223445555554222221 223455677888877887753
Q ss_pred -------cCCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 617 -------IGNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 617 -------~~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
...++|++....+++++++++.+.+++.
T Consensus 428 ~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~ 462 (467)
T KOG1358|consen 428 EKLERCPIPPSIRICVSAGMSEEELERAAELIKEV 462 (467)
T ss_pred hhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 1258999999999999999998887654
No 381
>PRK07049 methionine gamma-lyase; Validated
Probab=99.56 E-value=2.9e-13 Score=153.76 Aligned_cols=244 Identities=14% Similarity=0.136 Sum_probs=158.1
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
+.+.++....|.+.|+++.+ .+.+++++||++|+..++..... ++++|++.++.|.++.......
T Consensus 78 ~R~~~Pt~~~Le~~lA~leg--~~~~iv~~sG~~Ai~~~l~al~~--------~Gd~Vv~~~p~Y~~~~~~~~~~----- 142 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYEG--AESAALFSSGMSAIATTLLAFVR--------PGDVILHSQPLYGGTETLLAKT----- 142 (427)
T ss_pred cCCCCcCHHHHHHHHHHHhC--CCcEEEEccHHHHHHHHHHHHhC--------CCCEEEEcCCCcccHHHHHHHH-----
Confidence 45677888899999999984 56799999999999988876643 5688999999998873321110
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC--CCcEEEEEEccccccCCCcccCChHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVR 449 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~ 449 (965)
........+.++.. .|++++++++.+. ..++.+|++|. ++|++|.+.+ ++++.
T Consensus 143 ----l~~~Gi~~v~~~~~----------------~d~~~l~~~l~~~~~~~~tklv~les-P~NPtg~v~d----~~~l~ 197 (427)
T PRK07049 143 ----FRNFGVGAVGFADG----------------LSEAAIGAAAEAAAAKGRVSLILIET-PANPTNSLVD----VAAVR 197 (427)
T ss_pred ----HHhcCcEEEEEeCC----------------CCHHHHHHHHHhhccCCCceEEEEEC-CCCCCCcccC----HHHHH
Confidence 00000111222211 1445666666432 23577888888 8999998875 44555
Q ss_pred HHHHh------cCCeEEEeccccCCCcccccccccccCCCccee--eeccccCC-CcccceeeeecHHHHHhhhccCCcc
Q psy8199 450 EICNN------YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNIN 520 (965)
Q Consensus 450 ~l~~~------~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~g-G~~pig~v~~~~~i~~~~~~~~~~~ 520 (965)
++|++ +++++|+||++.++.... .. ....|++ ++||.++| +.+++|++++++++++.+..
T Consensus 198 ~la~~~~~~~~~~~~vvvDety~~~~~~~---pl---~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~----- 266 (427)
T PRK07049 198 RVADAIEARQGHRPIIACDNTLLGPVFQK---PL---EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRA----- 266 (427)
T ss_pred HHHHHhhhcccCCCEEEEECCccccccCC---cc---ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHH-----
Confidence 55554 799999999976442111 11 1234666 68999985 44899999999998887764
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCce--e----------eeeceeEE
Q psy8199 521 IFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKI--I----------NFRQKGMI 583 (965)
Q Consensus 521 ~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i--~----------~v~g~G~~ 583 (965)
.........+|..+.+++..|+.+.. ..++..++.+.+.+.|++.. .+|+. . ...|-|.+
T Consensus 267 -~~~~~g~~ls~~~a~l~~r~L~tl~~--R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~ 343 (427)
T PRK07049 267 -LRSAIGTQLDPHSCWMLGRSLETLVL--RMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGST 343 (427)
T ss_pred -HHHhcCCCCCHHHHHHHHcCCChHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccE
Confidence 11122334678888888887765532 24555777777777776542 13421 1 12356889
Q ss_pred EEEEEe
Q psy8199 584 WAFDVI 589 (965)
Q Consensus 584 ~~i~~~ 589 (965)
+.|++.
T Consensus 344 ~s~~~~ 349 (427)
T PRK07049 344 FSFDIK 349 (427)
T ss_pred EEEEEc
Confidence 999985
No 382
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.55 E-value=2.2e-13 Score=153.71 Aligned_cols=263 Identities=14% Similarity=0.120 Sum_probs=167.0
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
...+.++...+|+++++++.+ .+..++++||+.|+..++.... .++++||+.++.|.+. ........
T Consensus 55 y~r~~~pt~~~Le~~lA~l~G--~~~al~~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~~~y~~~-~~~~~~~~-- 121 (386)
T PRK06767 55 YSRLGNPTVKLFEERMAVLEG--GEEALAFGSGMAAISATLIGFL--------KAGDHIICSNGLYGCT-YGFLEVLE-- 121 (386)
T ss_pred ccCCCCcchHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHH-HHHHHHHH--
Confidence 345677788999999999996 4677888999999988876553 2567888887766433 22211110
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
......+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.+
T Consensus 122 ------~~~gi~~~~~~~-----------------~d~~~l~~~i~---~~tklV~les-p~NptG~v~d----l~~I~~ 170 (386)
T PRK06767 122 ------EKFMITHSFCDM-----------------ETEADIENKIR---PNTKLIFVET-PINPTMKLID----LKQVIR 170 (386)
T ss_pred ------hhcCeEEEEeCC-----------------CCHHHHHHhhC---cCceEEEEeC-CCCCCceecC----HHHHHH
Confidence 000011222221 25677887775 3567888887 7999998887 899999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccc-eeeeecHHHHHhhhccCCcccccccCC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pi-g~v~~~~~i~~~~~~~~~~~~~~~~~t 527 (965)
+|+++|+++|+||+|. .+..+.. .....|+++ ++|.++|...++ |+++++++.++.+... .. ...++.
T Consensus 171 la~~~g~~vivD~a~a-~~~~~~p-----l~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~--~~-~~~g~~ 241 (386)
T PRK06767 171 VAKRNGLLVIVDNTFC-SPYLQRP-----LELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRP--MR-KDIGGI 241 (386)
T ss_pred HHHHcCCEEEEECCCc-ccccCCc-----hhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHH--HH-HHhCCC
Confidence 9999999999999985 2222211 112347764 579998743675 7888888877654320 00 011222
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeee------------eceeEEEEEEEeecCccc
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINF------------RQKGMIWAFDVIIEDPEQ 595 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v------------~g~G~~~~i~~~~~~~~~ 595 (965)
.+|..+++++..|+.+. ...++.+++..++.+.|++. |++..| ++.|.|+.|++. ++
T Consensus 242 --~~~~~a~l~~~~L~tl~--~r~~~~~~~a~~la~~L~~~---p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~-~~--- 310 (386)
T PRK06767 242 --MAPFDAWLLLRGLKTLA--VRMDRHCDNAEKIVSFLKNH---DAVEGVWYPEGELASRQMKRGGGVISFSIK-GG--- 310 (386)
T ss_pred --CCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHcC---CCccEEECCCcHHHHHhCCCCCceEEEEEc-CC---
Confidence 35776676666665443 24567778888888888765 444322 356789999885 22
Q ss_pred hhhHHHHHHHHHHHcCcEEeecC
Q psy8199 596 IETFSKKFFVAALKNELLLRPIG 618 (965)
Q Consensus 596 ~~~~~~~~~~~l~~~Gi~~~~~~ 618 (965)
.....+|.+.|...++.+..++
T Consensus 311 -~~~~~~f~~~l~~~~~~~s~G~ 332 (386)
T PRK06767 311 -KEETQAFINDLHFITIAVSLGD 332 (386)
T ss_pred -HHHHHHHHHhCCccEEecCCCC
Confidence 1224467777776666555444
No 383
>smart00876 BATS Biotin and Thiamin Synthesis associated domain. Biotin synthase (BioB), , catalyses the last step of the biotin biosynthetic pathway. The reaction consists in the introduction of a sulphur atom into dethiobiotin. BioB functions as a homodimer PUBMED:12482614. Thiamin synthesis if a complex process involving at least six gene products (ThiFSGH, ThiI and ThiJ). Two of the proteins required for the biosynthesis of the thiazole moiety of thiamine (vitamin B(1)) are ThiG and ThiH (this entry) and form a heterodimerPUBMED:12650933. Both of these reactions are thought of involve the binding of co-factors, and both function as dimers PUBMED:12482614, PUBMED:12650933. This domain therefore may be involved in co-factor binding or dimerisation.
Probab=99.55 E-value=1.8e-14 Score=125.55 Aligned_cols=93 Identities=51% Similarity=0.818 Sum_probs=84.8
Q ss_pred eeccccccCCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHhhcCccEEeeCCccccCCCCCC
Q psy8199 859 PINNLVQIKGTPLYGS-SILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKT 937 (965)
Q Consensus 859 ~~~~~~P~~gT~l~~~-~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~ 937 (965)
+++.|.|.+|||+++. ++.+.++++|++|++|+++|+..|+++++++.+..+.+..++.+|||+++.|+.++|+.|...
T Consensus 1 pin~l~P~~gTp~~~~~~~~~~~~~l~~ia~~Rl~~P~~~I~~~~gr~~~~~~~~~~~l~aGan~~~~G~~~lt~~g~~~ 80 (94)
T smart00876 1 PINRLRPIEGTPLEDPPPPVSPEEFLRTIAAARLALPDAGIRLSTGREALLRDLQALCFSAGANSIFGGDKYLTTSGPRS 80 (94)
T ss_pred CCCccccCCCCCcccCCCCCCHHHHHHHHHHHHHHCCCcceEEecCCchhcchHHHHhhhccCceeeeCCccccCCCcCc
Confidence 5788999999999987 889999999999999999999999999999888788888899999999999985668888888
Q ss_pred hhhHHHHHHcCCCc
Q psy8199 938 NDDSKLLKKLGINT 951 (965)
Q Consensus 938 ~~~~~~~~~~g~~~ 951 (965)
.++++|++++|+.+
T Consensus 81 ~~d~~~i~~~g~~~ 94 (94)
T smart00876 81 ADDVAMLEKLGLEP 94 (94)
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999999864
No 384
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.54 E-value=3.9e-13 Score=151.52 Aligned_cols=240 Identities=14% Similarity=0.185 Sum_probs=152.6
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
+.+.++...+++++++++.+ .+.+++++||++|+..++.... .++++||+.+..|.+. ....
T Consensus 56 ~r~~~p~~~~le~~la~l~g--~~~~v~~ssG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~t-~~~~------- 117 (390)
T PRK08133 56 SRFTNPTVTMFQERLAALEG--AEACVATASGMAAILAVVMALL--------QAGDHVVSSRSLFGST-VSLF------- 117 (390)
T ss_pred ECCCChHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEccCcchhH-HHHH-------
Confidence 45667788999999999985 4678999999999999987653 2567888877666543 1110
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
..........+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.++
T Consensus 118 -~~~~~~~G~~v~~vd~-----------------~d~~~l~~~i~---~~tklV~ie~-p~NptG~v~d----l~~I~~l 171 (390)
T PRK08133 118 -EKIFARFGIETTFVDL-----------------TDLDAWRAAVR---PNTKLFFLET-PSNPLTELAD----IAALAEI 171 (390)
T ss_pred -HHHHHHcCcEEEEECC-----------------CCHHHHHHhcC---cCCeEEEEEC-CCCCCCCcCC----HHHHHHH
Confidence 0001111123344433 25677888774 4577888887 7999998876 8999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccc-eeeeecHHHHHhhhccCCcccccccCCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHSHSY 528 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pi-g~v~~~~~i~~~~~~~~~~~~~~~~~t~ 528 (965)
|++||+++|+|+++... ..... .....|+++ ++|.++|...++ |++++++++++.+.. .......
T Consensus 172 a~~~gi~livD~t~~~~-~~~~p-----l~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~------~~~~~g~ 239 (390)
T PRK08133 172 AHAAGALLVVDNCFCTP-ALQQP-----LKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFG------FLRTAGP 239 (390)
T ss_pred HHHcCCEEEEECCCccc-ccCCc-----hhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHH------HHHHhCC
Confidence 99999999999998522 11111 122357774 679987754677 566677776655542 1111223
Q ss_pred CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEe
Q psy8199 529 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVI 589 (965)
Q Consensus 529 ~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~ 589 (965)
..+|..+..++..|+.+.. ..++..++...+.+.|++.. .+|++.. ..|-|.|+.|++.
T Consensus 240 ~~~~~~a~~~l~gl~tl~~--R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~ 313 (390)
T PRK08133 240 TLSPFNAWVFLKGLETLSL--RMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK 313 (390)
T ss_pred CCCHHHHHHHHcccchHHH--HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 4566666666666654432 23444556666666665431 2333221 3467889999985
No 385
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.54 E-value=3e-12 Score=143.35 Aligned_cols=215 Identities=11% Similarity=0.093 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccccc-C-CC
Q psy8199 406 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA-E-IW 483 (965)
Q Consensus 406 ~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~-~-~~ 483 (965)
.|.+++++.+.+..+ ..+++ . ..+. +...| +++|+++|++||+++++|++|+ +|-.|-....+.+ . -.
T Consensus 207 iD~d~l~~~~~~~~p--lvii~-g-~S~~-~~~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~ 276 (493)
T PRK13580 207 LDYDEIAALAREFKP--LILVA-G-YSAY-PRRVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPH 276 (493)
T ss_pred cCHHHHHHHHhhcCC--EEEEe-C-cccc-CCCcC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCC
Confidence 478899988875322 33333 3 3344 44556 9999999999999999999996 6655421111111 1 14
Q ss_pred ccee--eeccccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc---cHHHHHHHHH
Q psy8199 484 PDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD---NILQRISQDM 558 (965)
Q Consensus 484 pDiv--t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~---~~~~~~~~~~ 558 (965)
.|++ |++|++.|. ..|++++++++.+.+.. ..++.+++. .+..++++..++..+.++ ...+++.++.
T Consensus 277 ~D~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~~---a~P~i~gg~---l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na 348 (493)
T PRK13580 277 ADIVTTTTHKTLRGP--RGGLVLAKKEYADAVDK---GCPLVLGGP---LPHVMAAKAVALAEARTPEFQKYAQQVVDNA 348 (493)
T ss_pred CcEEEeCChhhccCC--CeEEEEecHHHHHHHhh---CCCcccCCC---ccHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 6877 568999763 34778889998888753 223443332 233444444455554433 3688999999
Q ss_pred HHHHHHHHcccCCCceeee--eceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee-------c----CCEEEEeC
Q psy8199 559 KKITKALTSLITHPKIINF--RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-------I----GNTVYLMP 625 (965)
Q Consensus 559 ~~l~~~L~~l~~~~~i~~v--~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~----~~~lR~~p 625 (965)
++|++.|.+. ++..+ .....++.+++. +. ......+.+.|.+.||++.+ . ...|||++
T Consensus 349 ~~La~~L~~~----G~~vv~ggTdshIV~V~lg--~~---~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~ 419 (493)
T PRK13580 349 RALAEGFLKR----GARLVTGGTDNHLVLIDVT--SF---GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGT 419 (493)
T ss_pred HHHHHHHHhc----CCCccCCCCCCCEEEEEeC--CH---HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEecc
Confidence 9999999875 32222 134567777764 21 11123566789999999863 1 25799999
Q ss_pred Cc----ccCHHHHHHHHHhhhccccc
Q psy8199 626 PY----ILNKNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 626 ~~----~~t~~~i~~~~~~l~~~~~~ 647 (965)
+. .+++++++++.+.+.+++..
T Consensus 420 ~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 420 PALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred chhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 88 55799999999998765543
No 386
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.54 E-value=7e-13 Score=148.56 Aligned_cols=237 Identities=14% Similarity=0.179 Sum_probs=154.2
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
...+.++...+|+++++++.+ .+..++++||++|+..++.+. .++++||+.++.|++.......
T Consensus 46 y~r~~~pt~~~le~~la~l~g--~~~~~~~~sG~~ai~~~~~ll---------~~Gd~Vl~~~~~y~~t~~~~~~----- 109 (366)
T PRK08247 46 YSRTGNPTRGVLEQAIADLEG--GDQGFACSSGMAAIQLVMSLF---------RSGDELIVSSDLYGGTYRLFEE----- 109 (366)
T ss_pred ccCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHh---------CCCCEEEEecCCcCcHHHHHHH-----
Confidence 456788889999999999985 455788999999998776432 2568899999999874211100
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
........+.+++. .|++++++++. +++.+|++|. ++|+.|... .+++|.+
T Consensus 110 ----~~~~~G~~v~~vd~-----------------~d~~~l~~~i~---~~tklv~le~-P~NP~~~~~----dl~~I~~ 160 (366)
T PRK08247 110 ----HWKKWNVRFVYVNT-----------------ASLKAIEQAIT---PNTKAIFIET-PTNPLMQET----DIAAIAK 160 (366)
T ss_pred ----HhhccCceEEEECC-----------------CCHHHHHHhcc---cCceEEEEEC-CCCCCCcHH----HHHHHHH
Confidence 00011122334332 26788888875 3567888877 688876544 4999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCC-cccceeeeec-HHHHHhhhccCCcccccccC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG-YLPLSLVMTT-DKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG-~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~ 526 (965)
+|++||+++|+||+|.. +..+.. .....|++ +++|.++|. -...|+++++ +++.+.+.. .....
T Consensus 161 la~~~g~~lIvD~t~~~-~~~~~p-----~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~------~~~~~ 228 (366)
T PRK08247 161 IAKKHGLLLIVDNTFYT-PVLQRP-----LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAY------YQNAA 228 (366)
T ss_pred HHHHcCCEEEEECCCcc-ccccCc-----hhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHH------HHHhc
Confidence 99999999999999831 111111 12235666 578988762 2356777776 667665543 11223
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceee--eeceeEEEEEEEe
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN--FRQKGMIWAFDVI 589 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~--v~g~G~~~~i~~~ 589 (965)
+...+|..+..++..|+.+.. ..++.+++.+.+.+.|++ +|++.. .++.|.|++|++.
T Consensus 229 g~~~s~~~a~l~~~~l~tl~~--r~~~~~~~a~~l~~~L~~---~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 229 GAVLSPFDSWLLIRGMKTLAL--RMRQHEENAKAIAAFLNE---QPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred CCCCChHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHh---CCCeeEEecCCcCcEEEEEEC
Confidence 344577777777777764432 344556677777777654 466653 4457999999874
No 387
>TIGR01290 nifB nitrogenase cofactor biosynthesis protein NifB. This model describes NifB, a protein required for the biosynthesis of the iron-molybdenum (or iron-vanadium) cofactor used by the nitrogen-fixing enzyme nitrogenase. Archaeal homologs lack the most C-terminal region and score between the trusted and noise cutoffs of this model.
Probab=99.54 E-value=8.1e-13 Score=149.00 Aligned_cols=209 Identities=17% Similarity=0.265 Sum_probs=160.0
Q ss_pred EeEeeccCCCCCCCCCCCCCCc-C--CCCcccccCCCHHHHHHHHHHHHHC--CCCEEEEeeccCCCCcccHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTH-Y--NTEITATKILSIESVITAAQKAKSD--GATRFCMGAAWRELKDRDLDNIENMIC 757 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~-~--~~~~~~~~~~~~eei~~~~~~~~~~--g~~~i~l~~g~~~~~~~~~~~~~~~~~ 757 (965)
..+.+ +.+|+.+|.||..... . .+.....+.++++|+++.+....+. ++..+.|.|.++|+.. .+...+.++
T Consensus 26 ~~~~v-t~~CNl~C~yC~~~~~~~~esrpg~~~~~Ltpee~~~~i~~v~~~~~~~~~V~iaG~GEPLl~--~e~~~~~l~ 102 (442)
T TIGR01290 26 MHLAV-APACNIQCNYCNRKYDCANESRPGVVSELLTPEQALRKARQVAAEIPQLSVVGIAGPGDPLAN--IGKTFQTLE 102 (442)
T ss_pred EEEec-CCCCCCcCcCCCCCCCCCcCCCCccccccCCHHHHHHHHHHHHHhcCCCCEEEEecCCCcccC--ccccHHHHH
Confidence 45667 9999999999974321 0 0111123458999999999887764 5677888774667554 456777777
Q ss_pred HHHhc--CcEeEE-ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccC----------CC-----CHHHHHHHHHH
Q psy8199 758 EVKKI--GLETCL-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIS----------TR-----DYENRLNTLKN 818 (965)
Q Consensus 758 ~i~~~--~~~i~~-~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~----------~~-----~~~~~~~~i~~ 818 (965)
.+++. ++.+++ ++|.+..+.++.|++.|++.+.+++.+ +++.++++.+ +. .+++.++.++.
T Consensus 103 ~~~~~~~~i~i~lsTNG~~l~e~i~~L~~~gvd~V~islka~d~e~~~~Iy~~v~~~g~~~tG~~~~~il~e~~l~~l~~ 182 (442)
T TIGR01290 103 LVARQLPDVKLCLSTNGLMLPEHVDRLVDLGVGHVTITINAIDPAVGEKIYPWVWYEGERYTGREAADLLIERQLEGLEK 182 (442)
T ss_pred HHHHhcCCCeEEEECCCCCCHHHHHHHHHCCCCeEEEeccCCCHHHHhhcchhhccccccccCcchHHHHHHHHHHHHHH
Confidence 77764 677766 567777999999999999999999999 9999988741 11 25677899999
Q ss_pred HHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccC--CCCCC--CCCCCCHHHHHHHHHHHHHHCC
Q psy8199 819 VRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIK--GTPLY--GSSILDPLEFIRTIAVARITMP 894 (965)
Q Consensus 819 ~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~--gT~l~--~~~~~~~~~~~~~ia~~R~~lp 894 (965)
+.+.|+.+....++-.|.+++++.+.++++++++ ...+.+.+|.|.| |+++. ..++++.+++.++...++..+|
T Consensus 183 l~~~G~~v~v~~vlIpGiND~~i~~l~~~~~~lg--~~~~nl~p~~~~p~~G~~~~~~~~~~ps~e~l~~~~~~~~~~~~ 260 (442)
T TIGR01290 183 LTERGILVKVNSVLIPGINDEHLVEVSKQVKELG--AFLHNVMPLISAPEHGTVYGLNGQREPDPDELAALRDRLEMGTP 260 (442)
T ss_pred HHhCCCeEEEEEEeeCCcCHHHHHHHHHHHHhCC--CcEEEeecCCCccccCCccCcCCCCCcCHHHHHHHHHHHHhhhh
Confidence 9999998777666655677899999999999999 7778889999888 88764 4577888888888888877776
Q ss_pred CC
Q psy8199 895 TS 896 (965)
Q Consensus 895 ~~ 896 (965)
.+
T Consensus 261 ~~ 262 (442)
T TIGR01290 261 QM 262 (442)
T ss_pred hh
Confidence 44
No 388
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue.
Probab=99.53 E-value=1.1e-12 Score=137.94 Aligned_cols=195 Identities=18% Similarity=0.252 Sum_probs=143.8
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCC---CCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcE
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDG---ATRFCMGAAWRELKDRDLDNIENMICEVKKIGLE 765 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g---~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 765 (965)
|.+||++|.||.....+.. ...+.++++++++++..+.... ...|.++|| .|+.. .+.+.++++.+++.++.
T Consensus 22 ~~gCnl~C~~C~~~~~~~~--~~~~~~s~e~i~~~i~~~~~~~~~~~~~I~~~GG-EPll~--~~~~~~li~~~~~~g~~ 96 (235)
T TIGR02493 22 MQGCPLRCQYCHNPDTWDL--KGGTEVTPEELIKEVGSYKDFFKASGGGVTFSGG-EPLLQ--PEFLSELFKACKELGIH 96 (235)
T ss_pred ECCCCCcCCCCCChhhccC--CCCEECCHHHHHHHHHHhHHHHhcCCCeEEEeCc-ccccC--HHHHHHHHHHHHHCCCC
Confidence 7899999999986532221 1234589999999888766542 256888775 46444 45567888888887765
Q ss_pred eEE-ecCCCC--HHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec--CCCHH
Q psy8199 766 TCL-TLGMLN--ENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL--SESRD 839 (965)
Q Consensus 766 i~~-~~~~~~--~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl--~et~e 839 (965)
+.+ ++|.+. .+.++.+.+ .++.+.+++++ +++.++++.+. ++++.+++++.+++.|+++...+++.. .++.+
T Consensus 97 ~~i~TNG~~~~~~~~~~~ll~-~~d~v~isl~~~~~~~~~~~~g~-~~~~v~~~i~~l~~~g~~~~v~~vv~~~~~~n~~ 174 (235)
T TIGR02493 97 TCLDTSGFLGGCTEAADELLE-YTDLVLLDIKHFNPEKYKKLTGV-SLQPTLDFAKYLAKRNKPIWIRYVLVPGYTDSEE 174 (235)
T ss_pred EEEEcCCCCCccHHHHHHHHH-hCCEEEEeCCCCCHHHHHHHHCC-CcHHHHHHHHHHHhCCCcEEEEEeeeCCcCCCHH
Confidence 544 455433 556666666 47899999999 89999998765 789999999999999998776666654 46889
Q ss_pred HHHHHHHHHHhcCCCCCceeecccccc---------CCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 840 QRAELIFQLANLNPYPESVPINNLVQI---------KGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 840 d~~~~l~~l~~l~~~~~~i~~~~~~P~---------~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
++.+.++++.+++. ...+.+.+|.|. +..++.+.++++.+++.++.+++|.
T Consensus 175 ei~~l~~~~~~l~~-~~~~~~~p~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (235)
T TIGR02493 175 DIEALAEFVKTLPN-VERVEVLPYHQLGVYKWEALGIEYPLEGVKPPNKEQLERAAEIFKE 234 (235)
T ss_pred HHHHHHHHHHhCCC-CceEEecCCCcccHHHHHHcCCcCccCCCCCCCHHHHHHHHHHHhh
Confidence 99999999999982 356667777764 2334566788899999888887764
No 389
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.53 E-value=6.1e-13 Score=149.91 Aligned_cols=241 Identities=13% Similarity=0.138 Sum_probs=162.1
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
.+++.++...+++++++++.+ .+.+++++||++|+..++..... ++++||+.++.|++........
T Consensus 58 y~r~~~p~~~~le~~lA~l~g--~~~~i~~ssG~~Ai~~~l~all~--------~GD~Vi~~~~~y~~~~~~~~~~---- 123 (398)
T PRK08249 58 YSRNTNPTVQAFEEKVRILEG--AEAATAFSTGMAAISNTLYTFLK--------PGDRVVSIKDTYGGTNKIFTEF---- 123 (398)
T ss_pred ccCCCChHHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC--------CCCEEEEcCCchHHHHHHHHHH----
Confidence 356778889999999999985 56788889999999999876532 5688999999997642110000
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
.......+.+++. .|+++++++++ +++.+|++|. ++|++|.+.+ +++|.+
T Consensus 124 -----~~~~Gi~v~~vd~-----------------~d~e~l~~~i~---~~tklV~ie~-p~NPtg~v~d----l~~I~~ 173 (398)
T PRK08249 124 -----LPRMGVDVTLCET-----------------GDHEQIEAEIA---KGCDLLYLET-PTNPTLKIVD----IERLAA 173 (398)
T ss_pred -----HhhCCeEEEEcCC-----------------CCHHHHHHhcC---CCCeEEEEEC-CCCCCCccCC----HHHHHH
Confidence 0001111222221 26788888885 3567888887 7899999887 899999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccc-eeeeecHHHHHhhhccCCcccccccCC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pi-g~v~~~~~i~~~~~~~~~~~~~~~~~t 527 (965)
+|++||+++|+|++|..+. ... ......|++ +++|.++|..-.+ |++++++++++.+.. +.....
T Consensus 174 la~~~gi~livD~t~a~~~-~~~-----~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~------~~~~~g 241 (398)
T PRK08249 174 AAKKVGALVVVDNTFATPI-NQN-----PLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYH------YREING 241 (398)
T ss_pred HHHHcCCEEEEECCcCccc-cCC-----chhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHH------HHHhcC
Confidence 9999999999999987331 111 112346766 4689998632344 667778888877654 122233
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~ 589 (965)
...+|..++.++..|+.+.. ..++..++.+++.+.|++.. .+|++.. ..|-|.+++|++.
T Consensus 242 ~~~s~~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~ 316 (398)
T PRK08249 242 ATMDPMSAYLILRGMKTLKL--RVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLK 316 (398)
T ss_pred CCCCHHHHHHHHhCcchHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEc
Confidence 45678888888888876642 35666777788888887532 2444321 2467889999985
No 390
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.52 E-value=3.2e-12 Score=127.74 Aligned_cols=343 Identities=14% Similarity=0.167 Sum_probs=197.1
Q ss_pred cccccchhccCCCCCHH----HHHHHHHHHhh----------ccccccCCCCcHHHHHHHHHHHhhcCCCC--CeEEEcC
Q psy8199 258 DAISSWWVNLFGHSNSY----INKALKNQLNK----------LEHVMLSNLTHKPVIKLSEKLSSLTQYKL--GHCFYGS 321 (965)
Q Consensus 258 D~~~~~~~~~lGh~~p~----v~~av~~~~~~----------~~~~~~~~~~~~~~~~la~~l~~~~~~~~--~~v~~~~ 321 (965)
|..-+-+...||-++|. +.+..++...+ +..|..+.+.......|++.+.+.++.+. +.+.+||
T Consensus 25 d~Lrt~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTn 104 (417)
T COG3977 25 DGLRTPGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTN 104 (417)
T ss_pred hhccCCCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecC
Confidence 33333345666666654 44444332222 12334455667778899999999887654 4788999
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChh
Q psy8199 322 DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN 401 (965)
Q Consensus 322 sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (965)
+...|.-.+..+.-.++ .-| +.|.-++-..+-|-||....+. ...|....+....++.-
T Consensus 105 GSQs~fFYlfNlF~G~~-sdG-~~k~illPLaPeYiGY~d~~l~-------~d~fVs~kP~iel~~~g------------ 163 (417)
T COG3977 105 GSQSAFFYLFNLFAGRR-SDG-TEKKILLPLAPEYIGYADAGLE-------EDLFVSAKPNIELLPAG------------ 163 (417)
T ss_pred CccchHHHHHHHhcCcc-CCC-cceeEeeccChhhccccccccC-------ccceeeccCCccccccc------------
Confidence 87777776666553321 112 1233355567788888543322 11122222222222210
Q ss_pred HHHH-HHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccccccccc
Q psy8199 402 EIAR-CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA 480 (965)
Q Consensus 402 ~~~~-~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~ 480 (965)
.+.+ .|.++|. ..+.+.+|++.- +.|++|.+. +++.+.+|.+|+++||++||+|.+|. .=.-|--|.-...
T Consensus 164 ~FKY~vDF~~l~-----i~e~~g~ic~SR-PtNPTGNVl-TdeE~~kldalA~~~giPliIDnAYg-~PFP~iifsd~~~ 235 (417)
T COG3977 164 QFKYHVDFEHLH-----IGESTGAICVSR-PTNPTGNVL-TDEELAKLDALARQHGIPLIIDNAYG-VPFPGIIFSDATP 235 (417)
T ss_pred ceeeccCHHHcc-----cccccceEEecC-CCCCCCCcc-cHHHHHHHHHHhhhcCCcEEEecccC-CCCCceecccccc
Confidence 0111 2445443 246789999987 789999877 77789999999999999999999983 3222221211111
Q ss_pred CCCccee---eecc-ccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH-----HhcccHH
Q psy8199 481 EIWPDFL---CLSK-GITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI-----FNKDNIL 551 (965)
Q Consensus 481 ~~~pDiv---t~sK-~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~-----~~~~~~~ 551 (965)
--.++++ ++|| ||.| .+.|.++++++++.++..... --+......+.|.|...++- +.++-+.
T Consensus 236 ~w~~NiilC~SLSK~GLPG--~R~GIiIane~viqaitnmn~------iisLap~~~G~Aia~~mie~gdl~rlseqVIr 307 (417)
T COG3977 236 LWNENIILCMSLSKLGLPG--SRCGIIIANEKVIQAITNMNG------IISLAPGRMGPAIAAEMIESGDLLRLSEQVIR 307 (417)
T ss_pred cCCCCEEEEeehhhcCCCC--cceeEEEccHHHHHHHHhccc------eeeecCCCccHHHHHHHhhcchHHHHHHHhhh
Confidence 1235665 4578 6766 799999999999998865211 01111222333333333321 1111122
Q ss_pred HHHHHHHHHHHHHHHc-ccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC------------
Q psy8199 552 QRISQDMKKITKALTS-LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG------------ 618 (965)
Q Consensus 552 ~~~~~~~~~l~~~L~~-l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------ 618 (965)
.-.+.+.+...+.|++ +.+.+. .--+++|.++.+-.- .| -.-..+.++++|+++|+++.|+.
T Consensus 308 PFY~~~~q~~~~~l~~~lp~~~~-~iHkpEGAIFlWLWf-~d---LPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH 382 (417)
T COG3977 308 PFYRNRVQTTIAILRRYLPEYRC-LIHKPEGAIFLWLWF-KD---LPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPH 382 (417)
T ss_pred HHHHHHHHHHHHHHHHhcCccce-eeecCCcceeehhhh-cc---CCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCC
Confidence 2233333333344433 233332 345788887766543 22 11225579999999999998742
Q ss_pred --CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 619 --NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 619 --~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
.++|++ ++-+++.++.-+.++.+.
T Consensus 383 ~hqC~Rmn--~~~~~~~ie~Gva~lae~ 408 (417)
T COG3977 383 THQCMRMN--YVPEPEKIEKGVAILAEE 408 (417)
T ss_pred ccceEEEe--cCCCHHHHHHHHHHHHHH
Confidence 479999 889999999888777643
No 391
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.52 E-value=1.2e-12 Score=146.91 Aligned_cols=301 Identities=13% Similarity=0.044 Sum_probs=176.6
Q ss_pred cccccccchhccCCCCCHHHHHHHHHHHhhccccccCCC-------CcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHH
Q psy8199 256 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-------THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVE 328 (965)
Q Consensus 256 ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~~~~~~-------~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~ 328 (965)
|||..+. |..++.+.+|+.+.+..... ..... ..+...++.++++++++.+.+.++|++|+++|++
T Consensus 1 yld~a~~------~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~ 73 (353)
T TIGR03235 1 YLDHNAT------TPIDPAVAEAMLPWLLEEFG-NPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNN 73 (353)
T ss_pred CCCCCCC------CCCCHHHHHHHHHHHHhcCC-CCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHH
Confidence 6776554 33689999999988754211 11111 1234578888999999877779999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHH
Q psy8199 329 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 408 (965)
Q Consensus 329 ~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (965)
.+++...... ..++++.|++.. ..|.+........ ......+..++.+.. +. .|+
T Consensus 74 ~~l~~l~~~~---~~~g~~~vi~~~-~~~~s~~~~~~~~---------~~~G~~v~~v~~~~~-~~-----------~d~ 128 (353)
T TIGR03235 74 LAILGLARAG---EQKGKKHIITSA-IEHPAVLEPIRAL---------ERNGFTVTYLPVDES-GR-----------IDV 128 (353)
T ss_pred HHHHHHHHhc---ccCCCCeeeEcc-cccHHHHHHHHHH---------HhcCCEEEEEccCCC-Cc-----------CCH
Confidence 9988764321 012234555544 4444322221110 001123444444321 11 367
Q ss_pred HHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceee
Q psy8199 409 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC 488 (965)
Q Consensus 409 ~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt 488 (965)
++|++++. +++.+|+++. +++++|.+.+ +++|.++|+++|+++|+|+++. +|.. ........+|+++
T Consensus 129 ~~l~~~l~---~~~~lv~~~~-~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~D~~~ 195 (353)
T TIGR03235 129 DELADAIR---PDTLLVSIMH-VNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKI----TVDLSADRIDLIS 195 (353)
T ss_pred HHHHHhCC---CCCEEEEEEc-ccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCc----cccccccCCCEEE
Confidence 88888874 3457777777 7999999987 8999999999999999999986 5432 1222223479988
Q ss_pred ec--cccCCCcccceeeeecHHHHHhhhc-----cCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHH
Q psy8199 489 LS--KGITGGYLPLSLVMTTDKIYNSIYY-----KNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMK 559 (965)
Q Consensus 489 ~s--K~l~gG~~pig~v~~~~~i~~~~~~-----~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~ 559 (965)
+| |.+ |...+|+++++++....... ++...... ...+.|+...++..++|+.+.+ +...++.+++.+
T Consensus 196 ~s~~K~~--gp~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~ 271 (353)
T TIGR03235 196 CSGHKIY--GPKGIGALVIRKRGKPKAPLKPIMFGGGQERGL--RPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRN 271 (353)
T ss_pred eehhhcC--CCCceEEEEEccCcccccccCceeeCCCCcCcc--ccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 77 863 32347888888774322110 00000001 1123456666777777876642 345677777777
Q ss_pred HHHHHHHcccCCCceeeee----ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec
Q psy8199 560 KITKALTSLITHPKIINFR----QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 617 (965)
Q Consensus 560 ~l~~~L~~l~~~~~i~~v~----g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 617 (965)
+++++|++. ++..+. ....+..+.+. . . ....+...|.+ ||.+.++
T Consensus 272 ~l~~~l~~~----g~~~~~~~~~~~~~i~~~~~~--~----~-~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 272 QLRDALQTL----GVKLNGDPAETIPHILNFSID--G----V-NSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred HHHHHhccC----CeEEeCCcccccCCEEEEEeC--C----c-CHHHHHHHHhC-CeEEEch
Confidence 887777552 333221 11224444332 1 1 13356677754 8888764
No 392
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=99.52 E-value=1.3e-12 Score=147.17 Aligned_cols=175 Identities=21% Similarity=0.330 Sum_probs=140.5
Q ss_pred EeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHH
Q psy8199 681 LAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVK 760 (965)
Q Consensus 681 ~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~ 760 (965)
+...+++ |+.|+.+|.||........ ....++.+++.+.++++.+.|+..|.|+||+ |+... .+.++++.++
T Consensus 16 ~~l~i~i-T~~CNl~C~~C~~~~~~~~---~~~~~~~e~~~~ii~~~~~~g~~~v~~~GGE-Pll~~---~~~~il~~~~ 87 (378)
T PRK05301 16 LWLLAEL-TYRCPLQCPYCSNPLDLAR---HGAELSTEEWIRVLREARALGALQLHFSGGE-PLLRK---DLEELVAHAR 87 (378)
T ss_pred eEEEEEe-cCccCcCCCCCCCcccccc---ccCCCCHHHHHHHHHHHHHcCCcEEEEECCc-cCCch---hHHHHHHHHH
Confidence 4456777 9999999999976532111 1235899999999999989999999998764 65553 3667777777
Q ss_pred hcCc--EeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCC-CCHHHHHHHHHHHHHcCCceeeeEEEecCC
Q psy8199 761 KIGL--ETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGLSE 836 (965)
Q Consensus 761 ~~~~--~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~-~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~e 836 (965)
+.++ .+.+|...++++.++.|+++|++.+.+++++ +++.++.+++. .++++.+++++.+++.|+++...+++ ...
T Consensus 88 ~~g~~~~i~TNG~ll~~~~~~~L~~~g~~~v~iSldg~~~e~~d~irg~~g~f~~~~~~i~~l~~~g~~v~i~~vv-~~~ 166 (378)
T PRK05301 88 ELGLYTNLITSGVGLTEARLAALKDAGLDHIQLSFQDSDPELNDRLAGTKGAFAKKLAVARLVKAHGYPLTLNAVI-HRH 166 (378)
T ss_pred HcCCcEEEECCCccCCHHHHHHHHHcCCCEEEEEecCCCHHHHHHHcCCCchHHHHHHHHHHHHHCCCceEEEEEe-ecC
Confidence 6555 4555666789999999999999999999999 89999999875 48999999999999999998766554 468
Q ss_pred CHHHHHHHHHHHHhcCCCCCceeecccccc
Q psy8199 837 SRDQRAELIFQLANLNPYPESVPINNLVQI 866 (965)
Q Consensus 837 t~ed~~~~l~~l~~l~~~~~~i~~~~~~P~ 866 (965)
+.+++.+.++++.+++ ++.+.+..+.|.
T Consensus 167 N~~~i~~~~~~~~~lg--v~~i~~~~~~~~ 194 (378)
T PRK05301 167 NIDQIPRIIELAVELG--ADRLELANTQYY 194 (378)
T ss_pred CHHHHHHHHHHHHHcC--CCEEEEeccccc
Confidence 9999999999999999 888877755543
No 393
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.51 E-value=9.7e-13 Score=148.87 Aligned_cols=261 Identities=13% Similarity=0.125 Sum_probs=167.4
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
...++++...+|.++++++.+ .+.+++++||+.|+..++..... ++++|++.++.|.+. ......
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g--~~~~l~~~sG~~Ai~~al~~ll~--------~Gd~Vl~~~~~y~~~-~~~~~~---- 122 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEG--GEAAVVAASGMGAISSSLWSALK--------AGDHVVASDTLYGCT-FALLNH---- 122 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHhC--------CCCEEEEecCccchH-HHHHHH----
Confidence 345677888999999999986 45789999999999988875532 567888888766443 211100
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
........+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.+
T Consensus 123 ----~~~~~G~~v~~vd~-----------------~d~e~l~~~i~---~~tklI~ies-P~NPtG~v~d----l~~I~~ 173 (400)
T PRK06234 123 ----GLTRYGVEVTFVDT-----------------SNLEEVRNALK---ANTKVVYLET-PANPTLKVTD----IKAISN 173 (400)
T ss_pred ----HHhhCCeEEEEECC-----------------CCHHHHHHHhc---cCCeEEEEEC-CCCCCCCcCC----HHHHHH
Confidence 00001112233332 26788888885 3567888887 7999998887 999999
Q ss_pred HHHhc--CCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccc-eeeeecHHHHHhhhccCCccccccc
Q psy8199 451 ICNNY--NIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHS 525 (965)
Q Consensus 451 l~~~~--g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pi-g~v~~~~~i~~~~~~~~~~~~~~~~ 525 (965)
+|+++ |+++|+||+|..+ ..+.. .+...|++ +++|.++|..+++ |++++++++++.+.... ....
T Consensus 174 la~~~~~~i~livDea~~~~-~~~~~-----l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~----~~~~ 243 (400)
T PRK06234 174 IAHENNKECLVFVDNTFCTP-YIQRP-----LQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFG----IKDM 243 (400)
T ss_pred HHHhcCCCCEEEEECCCCch-hcCCc-----hhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHH----HHHh
Confidence 99997 9999999998632 22211 12346776 4679998743565 88889988887765310 0111
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEee
Q psy8199 526 HSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVII 590 (965)
Q Consensus 526 ~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~~ 590 (965)
.+...+|..++.++..|+.+. ...++.+++..++.+.|++.. .+|++. ...+.|.++.|++.
T Consensus 244 ~g~~l~p~~a~l~~~~l~tl~--~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~- 320 (400)
T PRK06234 244 TGSVIGPFEAFLIIRGMKTLQ--IRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELK- 320 (400)
T ss_pred cCCCCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEec-
Confidence 234567888888877776543 245666677777777776531 233321 12356889999885
Q ss_pred cCccchhhHHHHHHHHHHHcCc
Q psy8199 591 EDPEQIETFSKKFFVAALKNEL 612 (965)
Q Consensus 591 ~~~~~~~~~~~~~~~~l~~~Gi 612 (965)
++ ...+.+|.+.|.-.++
T Consensus 321 ~~----~~~~~~f~~~l~~~~~ 338 (400)
T PRK06234 321 GG----VEEGKVVMNNVKLATL 338 (400)
T ss_pred Cc----HHHHHHHHHhCCcceE
Confidence 22 1223456666554443
No 394
>KOG0256|consensus
Probab=99.51 E-value=5.3e-12 Score=132.02 Aligned_cols=286 Identities=17% Similarity=0.134 Sum_probs=176.0
Q ss_pred CCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCC--
Q psy8199 313 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-- 390 (965)
Q Consensus 313 ~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 390 (965)
+++++..+++++.||++.+-+.. .+++..++..|.|.|......--+ ++..+|..-
T Consensus 145 dP~~~Vv~~G~T~ane~l~fcLa--------dpgdafLvPtPyY~gfdrdl~~rT--------------gveivpv~c~S 202 (471)
T KOG0256|consen 145 DPERVVVTNGATSANETLMFCLA--------DPGDAFLVPTPYYPGFDRDLRWRT--------------GVEIVPVHCSS 202 (471)
T ss_pred CccceEEecccchhhHHHHHHhc--------CCCceeeecCCCCCcccccceecc--------------CceEEEEEeec
Confidence 56799999999999998877654 377889999999999843322222 222333211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhC---CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccC
Q psy8199 391 SRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 467 (965)
Q Consensus 391 ~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg 467 (965)
..+. ..+.++||+++.+. +.++..+++-. ++|+-|+.. +++.|..+.++|.++++-||+||||+|
T Consensus 203 s~~f----------~itv~alE~A~~~A~~~~~kVkGvlitN-PsNPLG~~~-~~e~L~~ll~Fa~~kniHvI~DEIya~ 270 (471)
T KOG0256|consen 203 SNGF----------QITVEALEAALNQARKLGLKVKGVLITN-PSNPLGTTL-SPEELISLLNFASRKNIHVISDEIYAG 270 (471)
T ss_pred CCCc----------cccHHHHHHHHHHHHHhCCceeEEEEeC-CCCCCCCcc-CHHHHHHHHHHHhhcceEEEeehhhcc
Confidence 1111 13677888777543 45566555444 489999876 677799999999999999999999997
Q ss_pred CCcccc-cccc-ccc---CCCccee----eeccccCCCcccceeeeec-HHHHHhhhccCCcccccccCCCCCCHHHHHH
Q psy8199 468 CGRTGK-FFAC-EHA---EIWPDFL----CLSKGITGGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCA 537 (965)
Q Consensus 468 ~gr~G~-~~~~-~~~---~~~pDiv----t~sK~l~gG~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aa 537 (965)
--.... +-+. +.. ...||.+ .+||=+|-.++++|++... +.+..+..+ + ++-...++..+.-
T Consensus 271 sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~k------m--ssf~~vSs~tQ~~ 342 (471)
T KOG0256|consen 271 SVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATK------M--SSFGLVSSQTQYL 342 (471)
T ss_pred cccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHH------H--hhccCCcHHHHHH
Confidence 322221 2111 111 2245644 6899555423899998875 566666654 1 1122245555555
Q ss_pred HHHHHHH--Hhc---ccHHHHHHHHHHHHHHHHHcccCCCceeee-eceeEEEEEEEeec-CccchhhHHHHHHHHHHHc
Q psy8199 538 ALATLEI--FNK---DNILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIE-DPEQIETFSKKFFVAALKN 610 (965)
Q Consensus 538 a~a~L~~--~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-~g~G~~~~i~~~~~-~~~~~~~~~~~~~~~l~~~ 610 (965)
+..-|.- ..+ .+...+++..-+++.++|+++ +|... ++.|+|.++++..- +..+.+. ...+++++.++
T Consensus 343 la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l----gI~cl~s~AGlF~wvDlr~lL~s~tfe~-El~Lw~~i~~~ 417 (471)
T KOG0256|consen 343 LASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL----GIPCLKSNAGLFCWVDLRKLLTSLTFEG-ELELWERILDN 417 (471)
T ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc----CCceeecCCeeEEEEEhHHhcCcCChHH-HHHHHHHHHHh
Confidence 5444421 100 224566777777888888876 55544 45688888887410 1111111 22466777766
Q ss_pred -CcEEeecC-------CEEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 611 -ELLLRPIG-------NTVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 611 -Gi~~~~~~-------~~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
++.+.|+. +|.|+.-+ .+.++.++-+++++...+.
T Consensus 418 vklnlSpG~s~~C~EpGWFRvcFA-n~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 418 VKLNLSPGSSCHCHEPGWFRVCFA-NMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred hccccCCCCcceecCCCeEEEEec-cCCHHHHHHHHHHHHHHHH
Confidence 99988853 79998832 4444444447777765443
No 395
>KOG1549|consensus
Probab=99.50 E-value=8.8e-13 Score=141.47 Aligned_cols=341 Identities=15% Similarity=0.083 Sum_probs=201.2
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhc-cccccC--CCCcHH-HHHHHHHHHhhcCCCCCeEEEcCChhHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLS--NLTHKP-VIKLSEKLSSLTQYKLGHCFYGSDGASAVEV 329 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~-~~~~~~--~~~~~~-~~~la~~l~~~~~~~~~~v~~~~sGseA~~~ 329 (965)
.-|||..+. |-.+|.|.+|+.+.+... +..+.. ++-.+. .++..+.++++.+.+..+++||+++|||+.+
T Consensus 44 ~vyld~~at------~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQAT------GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecCcC------CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 468887664 337999999999987664 222211 122222 4556667888888888889999999999999
Q ss_pred HHHH-HHHHHHhcCCCCce-EEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHH
Q psy8199 330 ALKM-SFHYWYNKGFLNKK-KFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 407 (965)
Q Consensus 330 Al~~-a~~~~~~~g~~~~~-~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 407 (965)
+++- ++.+. . +.. +||.+.. -|.+........-+. ...+.++|.+.... .|
T Consensus 118 vl~~v~~~~~----~-~~~k~iitl~~-eH~~v~~s~~~l~~~---------g~~Vt~lpv~~~~~------------~d 170 (428)
T KOG1549|consen 118 VLKGVARFFG----D-KTKKHIITLQT-EHPCVLDSCRALQEE---------GLEVTYLPVEDSGL------------VD 170 (428)
T ss_pred HHHHhhcccc----c-cccceEEEecc-cCcchhHHHHHHHhc---------CeEEEEeccCcccc------------cc
Confidence 9995 43331 1 122 5666654 455433222211111 13567778763221 47
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCccee
Q psy8199 408 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL 487 (965)
Q Consensus 408 ~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv 487 (965)
++.+++.|+ +++.+|.+.- ++|+.|.++| +++|.++|+++|+.+++|-+|. .|.. ..+...+.+|++
T Consensus 171 ~~~~~~~i~---~~T~lv~I~~-Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-vG~i----~vDV~eln~D~~ 237 (428)
T KOG1549|consen 171 ISKLREAIR---SKTRLVSIMH-VNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-VGKI----PVDVQELNADFL 237 (428)
T ss_pred HHHHHHhcC---CCceEEEEEe-cccCcccccc----HHHHHHHhCcCCcEEEeehhhh-cCCc----cccHHHcCchhe
Confidence 889998885 5788888998 9999999999 9999999999999999999995 6543 445556779999
Q ss_pred eec--cccCCCcccceeeeecHH-----HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHH
Q psy8199 488 CLS--KGITGGYLPLSLVMTTDK-----IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDM 558 (965)
Q Consensus 488 t~s--K~l~gG~~pig~v~~~~~-----i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~ 558 (965)
+++ |.++- -++|++.+++. +...+..+++.+.+.. +|- +...+...-++.+.... ......+.+..
T Consensus 238 s~s~HK~ygp--~~iGaLYvr~~~~~~~~~p~~~GGgq~r~~rs-GT~--~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~ 312 (428)
T KOG1549|consen 238 SISAHKIYGP--PGIGALYVRRKRPRLRVEPPLSGGGQERGLRS-GTV--ATPLAVGLGSAAEFVNKEMAYDEAIIKRLS 312 (428)
T ss_pred eeecccccCC--CcceEEEEccCCCcccccCcccCCcccccccc-CCc--CchhhhhhHHHHHHHHhhcchhHHHHHHHH
Confidence 887 54443 34999988861 1122333333333433 332 22333333344444332 22334444556
Q ss_pred HHHHHHHHc-ccC--CCcee-eeeceeEEEEEEEeec--------C-----ccchhhHHHHHHHHHHHcCcEEeecCCEE
Q psy8199 559 KKITKALTS-LIT--HPKII-NFRQKGMIWAFDVIIE--------D-----PEQIETFSKKFFVAALKNELLLRPIGNTV 621 (965)
Q Consensus 559 ~~l~~~L~~-l~~--~~~i~-~v~g~G~~~~i~~~~~--------~-----~~~~~~~~~~~~~~l~~~Gi~~~~~~~~l 621 (965)
.++..++.. ... ..+.. .-.+....+++....+ + +..+.....+....++..|+-.......+
T Consensus 313 ~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~i 392 (428)
T KOG1549|consen 313 EKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSI 392 (428)
T ss_pred HHHHHHHhhhCchhhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhccee
Confidence 666555533 111 11111 1111222333331100 0 00000000122344556666444445789
Q ss_pred EEeCCcccCHHHHHHHHHhhhccc
Q psy8199 622 YLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 622 R~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
||+.....++++++.+.+.+.+..
T Consensus 393 Ris~G~y~t~~di~~~~~~i~~~v 416 (428)
T KOG1549|consen 393 RISIGRYTTEEDIDYLVDAIKKLV 416 (428)
T ss_pred EEeeeeeCcHHHHHHHHHHHHHHH
Confidence 999999999999999998876543
No 396
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.50 E-value=2.7e-12 Score=148.75 Aligned_cols=286 Identities=15% Similarity=0.112 Sum_probs=169.4
Q ss_pred HHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhccc
Q psy8199 300 IKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSL 379 (965)
Q Consensus 300 ~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~ 379 (965)
.++.+.++++++.+.+++.+++||+++++.++...+. .++++|++.++.|+.+ ..++.... ...
T Consensus 115 ~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~-------~~g~~Vlv~~~~~~~~-~~~~~~~~--------~~~ 178 (447)
T PRK00451 115 FEYQTMICELTGMDVANASMYDGATALAEAALMAVRI-------TKRKKVLVSGAVHPEY-REVLKTYL--------KGQ 178 (447)
T ss_pred HHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHh-------cCCCEEEEeCccCHHH-HHHHHHHH--------HhC
Confidence 4444677899887777899999999988877764432 2567788877655333 22211100 001
Q ss_pred CCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeE
Q psy8199 380 LNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHL 459 (965)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 459 (965)
...+..+|.... . .|+++|++++. +++++|++.. + +++|.+.+ +++|.++|+++|+++
T Consensus 179 G~~~~~v~~~~~--~-----------~d~~~l~~~i~---~~t~~v~l~~-p-n~tG~v~~----l~~I~~~a~~~~~~~ 236 (447)
T PRK00451 179 GIEVVEVPYEDG--V-----------TDLEALEAAVD---DDTAAVVVQY-P-NFFGVIED----LEEIAEIAHAGGALF 236 (447)
T ss_pred CcEEEEecCCCC--C-----------CCHHHHHHhcC---CCeEEEEEEC-C-CCCCeeCC----HHHHHHHHHHCCCEE
Confidence 123344444321 1 36888888874 4577888877 5 77898876 999999999999999
Q ss_pred EE--eccccCCCcccccccccccCCCcceeee-----ccccCCCcccceeeeecHHHHHhhhcc---------CC-----
Q psy8199 460 IA--DEIAVGCGRTGKFFACEHAEIWPDFLCL-----SKGITGGYLPLSLVMTTDKIYNSIYYK---------NN----- 518 (965)
Q Consensus 460 I~--DEv~tg~gr~G~~~~~~~~~~~pDivt~-----sK~l~gG~~pig~v~~~~~i~~~~~~~---------~~----- 518 (965)
|+ |.+..|+ .. ... ....|++++ ||.+..|++.+|++.+++++++.+... +.
T Consensus 237 iv~~d~~~~g~--~~---~~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 309 (447)
T PRK00451 237 IVGVDPVSLGL--LK---PPG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVL 309 (447)
T ss_pred EEEcChHHhcc--CC---Ccc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEe
Confidence 98 6553221 11 111 234677754 554332226889998999888764210 00
Q ss_pred -------cccccccC-CCCCCHHHH-HHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEE-
Q psy8199 519 -------INIFLHSH-SYSGNPLAC-CAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA- 585 (965)
Q Consensus 519 -------~~~~~~~~-t~~~~~~~~-aaa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~- 585 (965)
...+.++. +++.+...+ .++.++|+.+.+ +...++..++.+++.++|+++ +++... .|.++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---~g~~~~--~~~~~~~ 384 (447)
T PRK00451 310 TLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI---GGVELF--DGPFFNE 384 (447)
T ss_pred eccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEec--CCCeEEE
Confidence 00011111 122222222 333334554433 335667777777888877654 444333 222222
Q ss_pred --EEEeecCccchhhHHHHHHHHHHHcCcEEe----ec----CCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 586 --FDVIIEDPEQIETFSKKFFVAALKNELLLR----PI----GNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 586 --i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~----~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
+.+. . ...++.++|.++|+... +. .+.+|++++...++++++++++.+.+
T Consensus 385 ~~v~~~-------~-~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~ 444 (447)
T PRK00451 385 FVVRLP-------K-PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGE 444 (447)
T ss_pred EEEecC-------C-CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 2221 0 13468888999987642 21 25899999988999999999998864
No 397
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.49 E-value=8.8e-12 Score=140.54 Aligned_cols=283 Identities=16% Similarity=0.131 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEE
Q psy8199 273 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 352 (965)
Q Consensus 273 p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~ 352 (965)
++-.+++.+.+..... +..+...++.++++++++ .+.+++++||++|+.+|++.... .++++||+.
T Consensus 14 ~~e~~~~~~~l~~~~~-----~~g~~~~~le~~la~~~g--~~~~v~~~sgt~al~lal~al~~-------~~Gd~Viv~ 79 (379)
T PRK11658 14 DEELAAVKEVLRSGWI-----TTGPKNQALEQAFCQLTG--NQHAIAVSSATAGMHITLMALGI-------GPGDEVITP 79 (379)
T ss_pred HHHHHHHHHHHHcCCc-----cCCHhHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHcCC-------CCCCEEEEC
Confidence 5557778777765311 234668899999999985 46789999999999999986511 356889999
Q ss_pred cCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccc
Q psy8199 353 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQ 432 (965)
Q Consensus 353 ~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~ 432 (965)
+++|.+........+ ..+++++....... .|++++++++. +++.+|+ | .
T Consensus 80 ~~~~~~~~~~~~~~G-------------~~~v~vd~~~~~~~-----------~d~~~l~~~i~---~~tkav~--~--~ 128 (379)
T PRK11658 80 SLTWVSTLNMIVLLG-------------ATPVMVDVDRDTLM-----------VTPEAIEAAIT---PRTKAII--P--V 128 (379)
T ss_pred CCcHHHHHHHHHHcC-------------CEEEEEecCCCcCC-----------cCHHHHHHhcc---cCCeEEE--E--e
Confidence 988877632222211 13344443211111 26788888885 3455665 3 2
Q ss_pred cCCCcccCChHHHHHHHHHHHhcCCeEEEecccc-CCCcccccccccccCCCcceeeec--cccCCCcccceeeeec-HH
Q psy8199 433 CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT-DK 508 (965)
Q Consensus 433 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~~~~~~~~~pDivt~s--K~l~gG~~pig~v~~~-~~ 508 (965)
+..|...+ +++|.++|++||+++|.|++|+ |.-..|.. ...+|. ++.+|+ |.|++| ..|+++.+ ++
T Consensus 129 ~~~G~~~d----~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~--~g~~g~--~~~Sf~~~K~l~~g--~GG~v~~~~~~ 198 (379)
T PRK11658 129 HYAGAPAD----LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH--IGARGT--AIFSFHAIKNITCA--EGGLVVTDDDE 198 (379)
T ss_pred CCCCCcCC----HHHHHHHHHHcCCeEEEECCCccCCeECCee--cCCCCC--EEEeCCCCCcCccc--CceEEEECCHH
Confidence 34677665 8899999999999999999997 22122221 122343 667775 678775 56777764 66
Q ss_pred HHHhhhc---cCCc-cc--------------ccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccC
Q psy8199 509 IYNSIYY---KNNI-NI--------------FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT 570 (965)
Q Consensus 509 i~~~~~~---~~~~-~~--------------~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~ 570 (965)
+++.+.. .+.. .. +..|..+..+.+.+|.++.-|+.++ +..++-+++.+++.+.|.++.-
T Consensus 199 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~--~~~~~r~~~a~~~~~~L~~~~~ 276 (379)
T PRK11658 199 LADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLE--ALNARRREIAARYLQALADLPF 276 (379)
T ss_pred HHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCC
Confidence 6655432 1100 00 0112334445566666666665543 3567777788888888876521
Q ss_pred CCc-eeeeeceeE--EEEEEEeecCccchhhHHHHHHHHHHHcCcEEe
Q psy8199 571 HPK-IINFRQKGM--IWAFDVIIEDPEQIETFSKKFFVAALKNELLLR 615 (965)
Q Consensus 571 ~~~-i~~v~g~G~--~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 615 (965)
... ......... ++.+.+. .. ......+.+.+.|.++||.++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~r~~~~~~L~~~gI~~~ 321 (379)
T PRK11658 277 QPLSLPAWPHQHAWHLFIIRVD-EE--RCGISRDALMEALKERGIGTG 321 (379)
T ss_pred ccCcCCCCCCceeEEEEEEEEC-Cc--cccCCHHHHHHHHHHCCCCCc
Confidence 100 001011112 2333332 11 001124568888999998654
No 398
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=99.48 E-value=4.7e-12 Score=137.90 Aligned_cols=210 Identities=14% Similarity=0.186 Sum_probs=147.5
Q ss_pred HHHHHHHhcCC-CeEEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCC
Q psy8199 666 AQKVHRKYFDA-NEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWREL 744 (965)
Q Consensus 666 a~~~~~~~~~g-~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~ 744 (965)
++-+-+++..+ +.+.+...+++ |+.|+.+|.||....... .. ....++.|++++.+. +.|+..|.|.|| +|+
T Consensus 12 ~~~~~~~~~~~~~~~Pl~l~le~-T~~CNL~C~~C~~~~~~~-~~-~~~~ls~ee~~~~i~---e~g~~~V~i~GG-EPL 84 (318)
T TIGR03470 12 GAYIIKQKLNGRKRFPLVLMLEP-LFRCNLACAGCGKIQYPA-EI-LKQRLSVEECLRAVD---ECGAPVVSIPGG-EPL 84 (318)
T ss_pred HHHHHHHHHhcCCCCCCEEEEec-ccccCcCCcCCCCCcCCC-cc-cccCCCHHHHHHHHH---HcCCCEEEEeCc-ccc
Confidence 34343444323 33455666777 999999999998654221 11 123489999987765 468888888775 576
Q ss_pred CcccHHHHHHHHHHHHhcCcEeEE-ecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhccc-CCCCHHHHHHHHHHHHHc
Q psy8199 745 KDRDLDNIENMICEVKKIGLETCL-TLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDII-STRDYENRLNTLKNVRNV 822 (965)
Q Consensus 745 ~~~~~~~~~~~~~~i~~~~~~i~~-~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~-~~~~~~~~~~~i~~~~~~ 822 (965)
...+ +.++++.+++.+..+.+ ++|.+-.+.+..++++|...+.+++++.++.+..+. ...+++..+++++.+++.
T Consensus 85 L~pd---l~eiv~~~~~~g~~v~l~TNG~ll~~~~~~l~~~~~~~i~VSLDG~~e~hd~~~~~~g~f~~~l~~I~~l~~~ 161 (318)
T TIGR03470 85 LHPE---IDEIVRGLVARKKFVYLCTNALLLEKKLDKFEPSPYLTFSVHLDGLREHHDASVCREGVFDRAVEAIREAKAR 161 (318)
T ss_pred cccc---HHHHHHHHHHcCCeEEEecCceehHHHHHHHHhCCCcEEEEEEecCchhhchhhcCCCcHHHHHHHHHHHHHC
Confidence 6644 45566666654544333 445555667899999999999999999667777764 457899999999999999
Q ss_pred CCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHH
Q psy8199 823 GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAV 888 (965)
Q Consensus 823 Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~ 888 (965)
|+++...+.+-.+++.+++.+.++++.+++ ++.+.+.+.+|....+-.+ ...+.++..+++..
T Consensus 162 G~~v~v~~tv~~~~n~~ei~~~~~~~~~lG--v~~i~i~p~~~~~~a~~~~-~~l~~~e~~~~~~~ 224 (318)
T TIGR03470 162 GFRVTTNTTLFNDTDPEEVAEFFDYLTDLG--VDGMTISPGYAYEKAPDQD-HFLGRRQTKKLFRE 224 (318)
T ss_pred CCcEEEEEEEeCCCCHHHHHHHHHHHHHcC--CCEEEEecCcccccccccc-cccCHHHHHHHHHH
Confidence 998887666534789999999999999999 8888888777765444322 23456665555444
No 399
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.48 E-value=3.6e-12 Score=143.01 Aligned_cols=241 Identities=11% Similarity=0.130 Sum_probs=158.1
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
.++++++...+|+++|+++.+ .+.+++++||++|+..++.... .++++|++.++.|++..........
T Consensus 46 Y~R~~~pt~~~L~~~lA~l~g--~~~~i~~~sg~~Ai~~~l~~l~--------~~GD~Vl~~~~~y~~~~~~~~~~~~-- 113 (386)
T PRK08045 46 YSRRGNPTRDVVQRALAELEG--GAGAVLTNTGMSAIHLVTTVFL--------KPGDLLVAPHDCYGGSYRLFDSLAK-- 113 (386)
T ss_pred eeCCCCccHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHh--
Confidence 456788889999999999986 3579999999999999988653 3668899999999764211111000
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
.....+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.+
T Consensus 114 -------~~gi~v~~vd~-----------------~d~e~l~~~l~---~~tklV~l~s-P~NPtG~v~d----i~~I~~ 161 (386)
T PRK08045 114 -------RGCYRVLFVDQ-----------------GDEQALRAALA---EKPKLVLVES-PSNPLLRVVD----IAKICH 161 (386)
T ss_pred -------hCCeEEEEeCC-----------------CCHHHHHHhcc---cCCeEEEEEC-CCCCCCEecC----HHHHHH
Confidence 00001222211 25677888775 3467778887 7999998887 889999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCC-cccceeeee-cHHHHHhhhccCCcccccccC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG-YLPLSLVMT-TDKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG-~~pig~v~~-~~~i~~~~~~~~~~~~~~~~~ 526 (965)
+|+++|+++|+||+|.... . ........|++ +++|.++|. -...|++++ ++++.+.+.. .....
T Consensus 162 ia~~~g~~vivDeay~~~~-~-----~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~------~~~~~ 229 (386)
T PRK08045 162 LAREAGAVSVVDNTFLSPA-L-----QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW------WANNI 229 (386)
T ss_pred HHHHcCCEEEEECCCCccc-c-----CCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHH------HHHhc
Confidence 9999999999999986431 1 11123345776 478988752 134677766 4667665543 11223
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEe
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVI 589 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~ 589 (965)
+...+|+.+..++..|+.+.. -.++..++...+.+.|++-. .+|++.. ..|.|.|++|++.
T Consensus 230 g~~~~p~~~~l~~rgl~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~ 305 (386)
T PRK08045 230 GVTGGAFDSYLLLRGLRTLVP--RMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_pred CCCCCHHHHHHHHhhhccHHH--HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec
Confidence 445788888888888876542 24566666777777776431 1333221 2467889999985
No 400
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.48 E-value=1.4e-11 Score=142.04 Aligned_cols=344 Identities=14% Similarity=0.048 Sum_probs=193.8
Q ss_pred cccccccccchhccCCCCCHHHHHHHHHHHhhc---cccc-cCCCCc---HHHHH-HHHHHHhhcCCCCCeEEEc---CC
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL---EHVM-LSNLTH---KPVIK-LSEKLSSLTQYKLGHCFYG---SD 322 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~---~~~~-~~~~~~---~~~~~-la~~l~~~~~~~~~~v~~~---~s 322 (965)
++.|.++++-. ...|.+.+++...+.+. +..+ ...... +..++ ..++++++++...+.+.|+ +|
T Consensus 34 ~~~l~l~~sen-----~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~s 108 (452)
T PTZ00094 34 IEGLELIASEN-----FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYS 108 (452)
T ss_pred HcCeeEecccc-----cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCc
Confidence 45677665522 24799999998877542 1110 001111 22232 3346778887666666676 79
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhH
Q psy8199 323 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 402 (965)
Q Consensus 323 GseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (965)
|++||..++....+ ++++|++. ..-||............ ....... .....+++....
T Consensus 109 gt~an~~v~~al~~--------~gd~Ii~~-~~ehg~~l~~~~~l~~~--~~~~~~~--~~~~~~~~~~~~--------- 166 (452)
T PTZ00094 109 GSPANFAVYTALLQ--------PHDRIMGL-DLPSGGHLTHGFYTAKK--KVSATSI--YFESLPYQVNEK--------- 166 (452)
T ss_pred hHHHHHHHHHHhcC--------CCCEEEec-ccccCCccccccccccc--cccccee--eeeeeecccCCC---------
Confidence 99999998887632 45677765 44566543321100000 0000000 011111111100
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc-ccccccC
Q psy8199 403 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAE 481 (965)
Q Consensus 403 ~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~ 481 (965)
...|+++|++++++...+ .|++. .+..|...| +++|.++|+++|+++++|++|+ +|..+.. +.....
T Consensus 167 -g~id~~~L~~~l~~~~~~--lvi~~---~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~~~- 234 (452)
T PTZ00094 167 -GLIDYDKLEELAKAFRPK--LIIAG---ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPSPFP- 234 (452)
T ss_pred -CCcCHHHHHHHHHHhCCC--EEEEe---CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCCCCC-
Confidence 115789999998653333 33341 345777887 9999999999999999999996 6665421 111111
Q ss_pred CCcceeeec--cccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcc---cHHHHHHH
Q psy8199 482 IWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD---NILQRISQ 556 (965)
Q Consensus 482 ~~pDivt~s--K~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~---~~~~~~~~ 556 (965)
..|++++| |++.|. .-|++++++++.+.+...-. ........-+.++.++++..++|+.+... ...+++.+
T Consensus 235 -~~D~l~~S~hK~l~GP--~Gg~l~~~~~~~~~l~~~~~-~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~ 310 (452)
T PTZ00094 235 -YADVVTTTTHKSLRGP--RSGLIFYRKKVKPDIENKIN-EAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLK 310 (452)
T ss_pred -CCcEEEcCCccCCCCC--CceEEEEecccchHHHHhhc-cccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 47888765 888773 23566667655443322000 00110111134667888888889887542 46788888
Q ss_pred HHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee----c------CCEEEEeCC
Q psy8199 557 DMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----I------GNTVYLMPP 626 (965)
Q Consensus 557 ~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~------~~~lR~~p~ 626 (965)
+.++|.+.|.+. ..+.+..- ....+..+.+. .. ......+...|.++||++.. . .+.+|++|+
T Consensus 311 l~~~l~~~L~~~-g~~v~~~~-~~~~~~~v~~~-~~----~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~ 383 (452)
T PTZ00094 311 NAKALAAALEKR-GYDLVTGG-TDNHLVLVDLR-PF----GITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTP 383 (452)
T ss_pred HHHHHHHHHHhC-CcEEecCC-CCCceEeecCC-cC----CCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCH
Confidence 999999988663 11111100 11123333332 11 11133566777778999842 1 268999997
Q ss_pred cccC----HHHHHHHHHhhhccccc
Q psy8199 627 YILN----KNEIQHMTSAIFQTFNE 647 (965)
Q Consensus 627 ~~~t----~~~i~~~~~~l~~~~~~ 647 (965)
...+ +++++++++.+.+.+..
T Consensus 384 ~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 384 ALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 7765 99999999988776543
No 401
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.47 E-value=1.3e-11 Score=143.05 Aligned_cols=334 Identities=14% Similarity=0.118 Sum_probs=190.8
Q ss_pred CCCHHHHHHHHHHHh--hcccc---ccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCC
Q psy8199 270 HSNSYINKALKNQLN--KLEHV---MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFL 344 (965)
Q Consensus 270 h~~p~v~~av~~~~~--~~~~~---~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~ 344 (965)
|.+|.+++++.+... ..+.| ..+.+..+...++.+.++++++.+ ...++.++|+.+...++.+++.+...+|..
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~-~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~ 159 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD-AVTLQPAAGAHGELTGLLMIRAYHEARGDT 159 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC-ceEEEeCcHHHHHHHHHHHHHHHhhccCcC
Confidence 457888888876522 22222 112234455678888899998643 234455677777766665555443334433
Q ss_pred CceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEE
Q psy8199 345 NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA 424 (965)
Q Consensus 345 ~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aa 424 (965)
++++|++.++.|+.+. .+.... ...++.+|.... +. .|+++|++++. +++++
T Consensus 160 ~~~~Vlv~~~~hp~~~-~~~~~~------------G~~vv~v~~~~~-~~-----------~D~e~L~~~i~---~~t~~ 211 (481)
T PRK04366 160 KRTEVIVPDSAHGTNP-ASAAMA------------GFKVVEIPSNED-GL-----------VDLEALKAAVG---EDTAA 211 (481)
T ss_pred CCCEEEEcCCccHhHH-HHHHHc------------CCEEEEeecCCC-CC-----------cCHHHHHhhcc---cCCeE
Confidence 5668888887665543 222111 123444444211 11 37888888875 34455
Q ss_pred EEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec--cccC----CCcc
Q psy8199 425 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGIT----GGYL 498 (965)
Q Consensus 425 ii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~----gG~~ 498 (965)
|++.. ++ ++|.+ ...+++|.++|+++|+++|+|+++. .+-.|.. ....+ ..|+++++ |.++ .|+-
T Consensus 212 V~v~~-Pn-~tG~~---~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g~~-~~~~~--GaD~~~~~~hK~l~~P~g~Ggp 282 (481)
T PRK04366 212 LMLTN-PN-TLGLF---ERNILEIAEIVHEAGGLLYYDGANL-NAILGKA-RPGDM--GFDVVHLNLHKTFSTPHGGGGP 282 (481)
T ss_pred EEEeC-CC-Ccccc---chHHHHHHHHHHHcCCEEEEEecCh-hhhcccC-Ccccc--CCCEEEEechhhcCCCCCCCCC
Confidence 54433 24 77754 1238999999999999999999985 3223321 12223 36888763 7665 2323
Q ss_pred cceeeeecHHHHHhhhcc--C-Cccccc----------ccCCCCCCHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHH
Q psy8199 499 PLSLVMTTDKIYNSIYYK--N-NINIFL----------HSHSYSGNPLACCAALATLEIFNKDNI---LQRISQDMKKIT 562 (965)
Q Consensus 499 pig~v~~~~~i~~~~~~~--~-~~~~~~----------~~~t~~~~~~~~aaa~a~L~~~~~~~~---~~~~~~~~~~l~ 562 (965)
.+|++.+++++.+.+... + ....+. ..-.++++.+.+.++...+..+..+++ .++...+.++|.
T Consensus 283 ~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~ 362 (481)
T PRK04366 283 GSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLK 362 (481)
T ss_pred CeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777888777665310 0 000000 111223445555666666666554533 355566788999
Q ss_pred HHHHcccCCCceeeeecee-EEEEEEEeecCccchhhHHHHHHHHHHHcCcEEe----e--cCCEEEEeCCcccCHHHHH
Q psy8199 563 KALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR----P--IGNTVYLMPPYILNKNEIQ 635 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~--~~~~lR~~p~~~~t~~~i~ 635 (965)
++|+++...+ . .+.. ..+.+.+. .-.........+.++|.++|+... | ..+.+|++|....|.++||
T Consensus 363 ~~L~~~~~~~---~-~~~~~~~~~~~~~--~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid 436 (481)
T PRK04366 363 ARLKDIYDLP---Y-DRPCMHEFVLSGK--KLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLD 436 (481)
T ss_pred HHhHhhCccc---C-CCCeeEEEEEECc--cccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHH
Confidence 9998761111 1 1100 11222210 000001124568899999999865 1 1468999999999999999
Q ss_pred HHHHhhhccccc
Q psy8199 636 HMTSAIFQTFNE 647 (965)
Q Consensus 636 ~~~~~l~~~~~~ 647 (965)
.+++.+.+...+
T Consensus 437 ~l~~~l~~i~~~ 448 (481)
T PRK04366 437 AFIAAMKQIAEE 448 (481)
T ss_pred HHHHHHHHHHHH
Confidence 999998766543
No 402
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.47 E-value=1.7e-11 Score=137.40 Aligned_cols=282 Identities=13% Similarity=0.063 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEE
Q psy8199 273 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 352 (965)
Q Consensus 273 p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~ 352 (965)
++..+++.+.+..... .+..+...++++.+++.+ +.+++++++||++|+..+++.+. ..++++||+.
T Consensus 11 ~~e~~a~~~~~~~~~~----~~~g~~~~~~e~~la~~~--g~~~~v~~~sgt~aL~~~l~al~-------~~pGd~Viv~ 77 (376)
T TIGR02379 11 GQELEYIAEAISEGKL----SGDGPFSRRCETWLENRT--GTKKALLTPSCTAALEMAALLLD-------IQPGDEVIMP 77 (376)
T ss_pred HHHHHHHHHHHHcCCc----cCCcHHHHHHHHHHHHHh--CCCeEEEeCCHHHHHHHHHHHcC-------CCCcCEEEEC
Confidence 5557788887765321 123567889999999987 56899999999999998887541 1367889999
Q ss_pred cCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccc
Q psy8199 353 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQ 432 (965)
Q Consensus 353 ~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~ 432 (965)
..+|.+........+ ..+++++....... .|++++++++. +++.+|+ | .
T Consensus 78 ~~t~~~~~~~~~~~G-------------~~~v~vd~d~~~~~-----------~d~~~le~~i~---~~tk~Ii--p--~ 126 (376)
T TIGR02379 78 SYTFVSTANAFVLRG-------------AKIVFVDIRPDTMN-----------IDETLIESAIT---HRTKAIV--P--V 126 (376)
T ss_pred CCCcHHHHHHHHHcC-------------CEEEEEecCCCcCC-----------CCHHHHHHhcC---cCceEEE--E--e
Confidence 998877533222221 13344443321111 26788888875 3455664 4 3
Q ss_pred cCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec----cccCCCcccceeeeec-H
Q psy8199 433 CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTT-D 507 (965)
Q Consensus 433 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s----K~l~gG~~pig~v~~~-~ 507 (965)
+.+|...+ +++|.++|++||+++|.|++|+ +|.. +.-...|..-|+.+|| |.++.| ...|+++.+ +
T Consensus 127 ~~~G~~~d----~~~I~~la~~~~i~vIeDaa~~-~g~~---~~~~~~g~~~~~~~fSf~~~K~l~~g-~~gG~v~~~~~ 197 (376)
T TIGR02379 127 HYAGVACD----MDTIMALANKHQLFVIEDAAQG-VMST---YKGRALGSIGHLGTFSFHETKNYTSG-GEGGALLINDQ 197 (376)
T ss_pred CCCCCccC----HHHHHHHHHHCCCEEEEECccc-cCCc---cCCcccCCCCCEEEEeCCCCCcCccc-CCceEEEECCH
Confidence 45677665 8899999999999999999997 4321 1111223334788888 988766 367877765 6
Q ss_pred HHHHhhhc---cCCcc-c-----------ccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccC--
Q psy8199 508 KIYNSIYY---KNNIN-I-----------FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-- 570 (965)
Q Consensus 508 ~i~~~~~~---~~~~~-~-----------~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~-- 570 (965)
++++.+.. .+... . ...+..+..+.+.++.+++.|+.+.+ ..++-++..++..+.|..+..
T Consensus 198 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~--~~~~r~~~~~~y~~~L~~~~~~~ 275 (376)
T TIGR02379 198 AFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADR--INQDRLATWQLYQDALKPLEEKG 275 (376)
T ss_pred HHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHhccCCcCC
Confidence 77766543 11100 0 01234445566777777777876643 456666667777777765421
Q ss_pred ---CCcee-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEe
Q psy8199 571 ---HPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR 615 (965)
Q Consensus 571 ---~~~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 615 (965)
.|.+. .....-.++.+.+. .. ...+++.+.|.++||..+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~i~~~--~~----~~r~~l~~~L~~~gI~~~ 318 (376)
T TIGR02379 276 IIELPSIPNGCQHNAHMFYIKLK--DE----DDRNELIKYLKEQEIMAV 318 (376)
T ss_pred eeeCCCCCCCCeeeeEEEEEEEC--Cc----CCHHHHHHHHHHCCCCcc
Confidence 11111 11111112333332 11 124578889999999765
No 403
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.47 E-value=2e-12 Score=144.42 Aligned_cols=241 Identities=13% Similarity=0.112 Sum_probs=153.8
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
++++.++....|+++++++.+ .+.+++++||++|+..++.... .++++|++.++.|.+.... ..
T Consensus 47 Y~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all--------~~Gd~Il~~~~~y~~~~~~-~~----- 110 (388)
T PRK08861 47 YTRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALL--------GPDDLIVAPHDCYGGTYRL-FN----- 110 (388)
T ss_pred ccCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHc--------CCCCEEEEcCCchHHHHHH-HH-----
Confidence 456788889999999999985 6899999999999999997663 2568899988888653110 00
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
.........+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.+
T Consensus 111 ---~~~~~~gi~v~~vd~-----------------~d~e~l~~~i~---~~tklV~les-P~NPtG~v~d----l~~I~~ 162 (388)
T PRK08861 111 ---TRANKGDFKVQFVDQ-----------------SDAAALDAALA---KKPKLILLET-PSNPLVRVVD----IAELCQ 162 (388)
T ss_pred ---HHHhcCCeEEEEECC-----------------CCHHHHHHhcC---cCCeEEEEEC-CCCCCCcccC----HHHHHH
Confidence 000000112223221 25678887774 3567888887 7999999887 889999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCC-cccceeeeec-HHHHHhhhccCCcccccccC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG-YLPLSLVMTT-DKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG-~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~ 526 (965)
+|+++|+++|+||+|... .. ..-.....|+++ ++|.++|. -...|+++++ +++++.+.. .....
T Consensus 163 la~~~gi~vIvDea~~~~-~~-----~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~------~~~~~ 230 (388)
T PRK08861 163 KAKAVGALVAVDNTFLTP-VL-----QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAW------WGNCI 230 (388)
T ss_pred HHHHcCCEEEEECCcccc-cc-----CCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHH------HHhcc
Confidence 999999999999998621 11 111233478875 56888762 1335666664 556554432 11112
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
....+|..+...+..|+.+.- -.++-.++...+.+.|++-. .+|++. ...|-|.++.|++.
T Consensus 231 G~~~~p~~a~l~~rgl~Tl~l--R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (388)
T PRK08861 231 GATGTPFDSYMTLRGIRTLGA--RMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA 306 (388)
T ss_pred CCCCChHHHHHHHhcCCCHHH--HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC
Confidence 234567777776666654431 23444556666666665431 234322 13467889999985
No 404
>PRK06460 hypothetical protein; Provisional
Probab=99.47 E-value=4.8e-12 Score=141.98 Aligned_cols=240 Identities=15% Similarity=0.135 Sum_probs=149.4
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
+...++...+|+++++++.+. +..+.++||++|+..++....+ ++++|++..+.|.+.-..
T Consensus 40 ~r~~~p~~~~L~~~lA~l~g~--~~~v~~~sG~~ai~~~l~al~~--------~Gd~Vl~~~~~~~~ty~~--------- 100 (376)
T PRK06460 40 SREANPTVLELTKKIVELENA--EMGVAFSSGMGAISTTALALLK--------PGNSVLVHRDMFGRSYRF--------- 100 (376)
T ss_pred eCCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhC--------CCCEEEEecCCcCcHHHH---------
Confidence 456677888999999999863 3445558889999988876532 567888876655332100
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
+..........+..++.. +.+.+++++ .+++.+|++|. ++|++|.+.+ +++|.++
T Consensus 101 ~~~~~~~~G~~v~~~~~~-----------------~~~~l~~~~---~~~tklV~l~s-p~NPtG~v~d----~~~I~~l 155 (376)
T PRK06460 101 FTDYLKNWGVNVDASNPG-----------------SDNIIEKAK---SKRYDVVFVEN-ITNPLLRVVD----ITELSKV 155 (376)
T ss_pred HHHHHHhhCcEEEEECCC-----------------CHHHHHHhc---CCCceEEEEEC-CCCCCCcccC----HHHHHHH
Confidence 000000011122333221 122344433 23567788888 7999999887 7789999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCC-cccceeeeecHHHHHhhhccCCcccccccCCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG-YLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 528 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG-~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~ 528 (965)
|++||+++|+||+|..+ ... .......|++ ++||.++|. ...+|++++++++++.+.. +....+.
T Consensus 156 a~~~g~~vivDea~~~~-~~~-----~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~------~~~~~g~ 223 (376)
T PRK06460 156 CKENGSILIVDATFSTP-INQ-----KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQ------MRRTLGT 223 (376)
T ss_pred HHHcCCEEEEECCcCcc-ccC-----ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHH------HHHhcCC
Confidence 99999999999998632 111 1111235766 578988751 1357889999998887764 1112233
Q ss_pred CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEe
Q psy8199 529 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVI 589 (965)
Q Consensus 529 ~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~ 589 (965)
+.+|..+..++..++.++ ...+++.++.+++.+.|++.. .+|++.. ..|.|.|++|++.
T Consensus 224 ~~~~~~a~~~l~~~~~l~--~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~ 297 (376)
T PRK06460 224 SLDPHAAYLTLRGIKTLK--IRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVN 297 (376)
T ss_pred CCCHHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 355666666656666554 346777888888888887542 1333221 2467899999985
No 405
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.47 E-value=4e-12 Score=143.52 Aligned_cols=240 Identities=15% Similarity=0.148 Sum_probs=157.0
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
..+.++...+|+++++++.+ .+.+++++||+.|+..++.... .++++|++.+..|.+. .....
T Consensus 65 ~r~~~p~~~~le~~lA~l~g--~~~al~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~t-~~~~~------ 127 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIEG--AEACFATASGMSAVFTALGALL--------GAGDRLVAARSLFGSC-FVVCN------ 127 (403)
T ss_pred eCCCCchHHHHHHHHHHHhC--CCcEEEECChHHHHHHHHHHHh--------CCCCEEEEccCCcchH-HHHHH------
Confidence 56778889999999999985 5689999999999999887653 2567888776554332 21110
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
.........+.+++. .|++++++++. +++.+|++|. +.|++|.+.+ +++|.++
T Consensus 128 --~~~~~~G~~v~~vd~-----------------~d~~~l~~ai~---~~tklV~~es-p~Nptg~v~d----l~~I~~l 180 (403)
T PRK07810 128 --EILPRWGVETVFVDG-----------------EDLSQWEEALS---VPTQAVFFET-PSNPMQSLVD----IAAVSEL 180 (403)
T ss_pred --HHHHHcCcEEEEECC-----------------CCHHHHHHhcC---cCceEEEEEC-CCCCCCeecC----HHHHHHH
Confidence 001111123334332 36788888885 3567889998 8999998886 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccc-eeeeecHHHHH-hhhccCCcccccccCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPL-SLVMTTDKIYN-SIYYKNNINIFLHSHS 527 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pi-g~v~~~~~i~~-~~~~~~~~~~~~~~~t 527 (965)
|+++|+++|+||++. .+..... . ....|+++ ++|.++|....+ |+++++++.+. .+.. +.....
T Consensus 181 a~~~g~~vivD~a~a-~~~~~~~--~---~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~------~~~~~g 248 (403)
T PRK07810 181 AHAAGAKVVLDNVFA-TPLLQRG--L---PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK------LMRHTG 248 (403)
T ss_pred HHHcCCEEEEECCCC-ccccCCh--h---hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH------HHHHhC
Confidence 999999999999986 2211111 1 22358775 579887632566 66777776554 2322 111222
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~ 589 (965)
...+|..++.++..|+.+.. ..++-.++..++.+.|++.. .+|++.. ..+-|.++.|++.
T Consensus 249 ~~~s~~~a~l~l~~L~tl~~--R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 249 PALSAFNAWVLLKGLETLAL--RVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred CCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 35688888888888876643 35666667777777776432 1232221 1267889999985
No 406
>TIGR03822 AblA_like_2 lysine-2,3-aminomutase-related protein. Members of this protein form a distinctive clade, homologous to lysine-2,3-aminomutase (of Bacillus, Clostridium, and methanogenic archaea) and likely similar in function. Members of this family are found in Rhodopseudomonas, Caulobacter crescentus, Bradyrhizobium, etc.
Probab=99.47 E-value=3.2e-12 Score=139.05 Aligned_cols=195 Identities=13% Similarity=0.133 Sum_probs=148.0
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC-CCCEEEEeeccCCCCcccHHHHHHHHHHHHh
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD-GATRFCMGAAWRELKDRDLDNIENMICEVKK 761 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~-g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~ 761 (965)
..+.+ |++|+.+|.||..+...+.. ....++.+++.+.+.++.+. ++.+|.|+||+ |+. .+.+.+.++++.+++
T Consensus 90 vll~v-T~~C~~~Cr~C~r~~~~~~~--~~~~l~~~e~~~~i~~i~~~~~I~~VilSGGD-Pl~-~~~~~L~~ll~~l~~ 164 (321)
T TIGR03822 90 VLLKP-VHVCPVYCRFCFRREMVGPE--GLGVLSPAELDAAFAYIADHPEIWEVILTGGD-PLV-LSPRRLGDIMARLAA 164 (321)
T ss_pred EEEEe-cCCCCCcCcCCCchhhcCCc--ccCcCCHHHHHHHHHHHHhCCCccEEEEeCCC-ccc-CCHHHHHHHHHHHHh
Confidence 44556 99999999999765422211 12346788888888888765 89999887774 543 234567777777766
Q ss_pred cC----cEeEE-----ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEE
Q psy8199 762 IG----LETCL-----TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGI 831 (965)
Q Consensus 762 ~~----~~i~~-----~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i 831 (965)
.+ +.+.+ ++..++++.++.|+++|. .+.+++++ .++.+ .++.+++++.++++|+.+....+
T Consensus 165 i~~v~~iri~Tr~~v~~p~rit~ell~~L~~~g~-~v~i~l~~~h~~el--------~~~~~~ai~~L~~~Gi~v~~q~v 235 (321)
T TIGR03822 165 IDHVKIVRFHTRVPVADPARVTPALIAALKTSGK-TVYVALHANHAREL--------TAEARAACARLIDAGIPMVSQSV 235 (321)
T ss_pred CCCccEEEEeCCCcccChhhcCHHHHHHHHHcCC-cEEEEecCCChhhc--------CHHHHHHHHHHHHcCCEEEEEee
Confidence 43 23433 345679999999999995 57899998 44322 37899999999999998876544
Q ss_pred E--ecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q psy8199 832 I--GLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTS 896 (965)
Q Consensus 832 ~--Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~ 896 (965)
+ |.+++.+++.++.+.+.+++ +....++.+.|.+||... ..+.++..+++..+|-.++..
T Consensus 236 Ll~gvNd~~~~l~~l~~~l~~~g--v~pyyl~~~~p~~g~~~f---~~~~~~~~~i~~~l~~~~~g~ 297 (321)
T TIGR03822 236 LLRGVNDDPETLAALMRAFVECR--IKPYYLHHLDLAPGTAHF---RVTIEEGQALVRALRGRISGL 297 (321)
T ss_pred EeCCCCCCHHHHHHHHHHHHhcC--CeeEEEEecCCCCCcccc---cCcHHHHHHHHHHHHHhCCCC
Confidence 4 77899999999999999999 888889999999998654 368899999999999888765
No 407
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.46 E-value=2.9e-12 Score=144.78 Aligned_cols=240 Identities=13% Similarity=0.134 Sum_probs=157.4
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
..+.++...+|+++++++.+ .+....++||+.|+..++.... .++++|++.++.|.+.........
T Consensus 60 ~r~~~p~~~~Le~~lA~l~G--~~~~~~~~sG~~Ai~~~l~~~l--------~~Gd~Vl~~~~~y~~~~~~~~~~~---- 125 (398)
T PRK07504 60 SRYSNPTVDMFEKRMCALEG--AEDARATASGMAAVTAAILCQV--------KAGDHVVAARALFGSCRYVVETLL---- 125 (398)
T ss_pred ecCCCchHHHHHHHHHHHhC--CCeeeEecCHHHHHHHHHHHHh--------CCCCEEEEcCCchhHHHHHHHHHH----
Confidence 45677888999999999985 4566678899999988776543 256889998888866522111000
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
......+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.++
T Consensus 126 -----~~~G~~v~~vd~-----------------~d~e~l~~ai~---~~tklV~les-p~NptG~v~d----l~~I~~l 175 (398)
T PRK07504 126 -----PRYGIESTLVDG-----------------LDLDNWEKAVR---PNTKVFFLES-PTNPTLEVID----IAAVAKI 175 (398)
T ss_pred -----hhcCeEEEEECC-----------------CCHHHHHHhcC---cCceEEEEEC-CCCCCcEecC----HHHHHHH
Confidence 001112233321 36788888774 4567888888 7999998887 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccce-eeeecHHHHHh-hhccCCcccccccCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLS-LVMTTDKIYNS-IYYKNNINIFLHSHS 527 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pig-~v~~~~~i~~~-~~~~~~~~~~~~~~t 527 (965)
|+++|+++|+||+|..+ ..... .....|+++ ++|.++|..+++| +++++++.+.. +.. +.....
T Consensus 176 a~~~gi~lvvD~a~a~~-~~~~~-----~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~------~~~~~g 243 (398)
T PRK07504 176 ANQAGAKLVVDNVFATP-LFQKP-----LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD------YFRHTG 243 (398)
T ss_pred HHHcCCEEEEECCcccc-ccCCc-----hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH------HHHHhC
Confidence 99999999999998632 11111 122367775 5799977437886 56667665542 321 111122
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~ 589 (965)
...+|..++.++..|+.+.. ..++..++..++.+.|++.. .+|++.. .+|-|.|+.|++.
T Consensus 244 ~~~s~~~A~~~l~~L~tl~~--R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 244 PSLSPFNAWTLLKGLETLPV--RVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred CCCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 34678888888888877643 35555677778877776532 2344321 2356889999985
No 408
>COG2100 Predicted Fe-S oxidoreductase [General function prediction only]
Probab=99.46 E-value=2.7e-12 Score=129.53 Aligned_cols=197 Identities=17% Similarity=0.220 Sum_probs=145.6
Q ss_pred cCCCCCCCCCCCCCCcCCC--CcccccCCCHHHHHHHHHHHHHC--CCCEEEEeeccCCCCcccHHHHHHHHHHHHh-cC
Q psy8199 689 TGGCTEDCGYCPQSTHYNT--EITATKILSIESVITAAQKAKSD--GATRFCMGAAWRELKDRDLDNIENMICEVKK-IG 763 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~--~~~~~~~~~~eei~~~~~~~~~~--g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~-~~ 763 (965)
|.+|+.||.||+....... ....| ..++|.+++......+. +.-+.++-+.+.|+... .+.++++++++ .+
T Consensus 114 ~tgCnlnCIfCSVdeGp~SrtR~~dy-~Vd~eyLl~w~~kVa~~KgkglEaHlDGqGEP~lYP---~l~~lVqalk~~~~ 189 (414)
T COG2100 114 STGCNLNCIFCSVDEGPYSRTRKLDY-VVDPEYLLEWFEKVARFKGKGLEAHLDGQGEPLLYP---HLVDLVQALKEHKG 189 (414)
T ss_pred CccccceeEEEeccCCcccceeccce-EecHHHHHHHHHHHHhhhCCCeEEEecCCCCCccch---hHHHHHHHHhcCCC
Confidence 7899999999987642111 11222 36799999888776654 35678888888786654 45555555554 23
Q ss_pred ---cEeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccC--CCCHHHHHHHHHHHHHcCCceeeeEEEecCCC
Q psy8199 764 ---LETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIS--TRDYENRLNTLKNVRNVGINICCGGIIGLSES 837 (965)
Q Consensus 764 ---~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~--~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et 837 (965)
+.+.++...++++.+++|.+||+|++++++++ +|+.-+.+.+ ..+.+..++..+.+.++||.+-..-++=.|-+
T Consensus 190 v~vVSmQTng~~L~~~lv~eLeeAGLdRiNlSv~aLDpk~Ak~L~G~~dYdv~kvle~aE~i~~a~idvlIaPv~lPG~N 269 (414)
T COG2100 190 VEVVSMQTNGVLLSKKLVDELEEAGLDRINLSVDALDPKLAKMLAGRKDYDVKKVLEVAEYIANAGIDVLIAPVWLPGVN 269 (414)
T ss_pred ceEEEEeeCceeccHHHHHHHHHhCCceEEeecccCCHHHHHHhcCccccCHHHHHHHHHHHHhCCCCEEEeeeecCCcC
Confidence 45567889999999999999999999999999 9999988887 56889999999999999998876666655788
Q ss_pred HHHHHHHHHHHHhcCC--CCCceeeccccccC-C-CCCCCCCCCCHHHHHHHHHHHH
Q psy8199 838 RDQRAELIFQLANLNP--YPESVPINNLVQIK-G-TPLYGSSILDPLEFIRTIAVAR 890 (965)
Q Consensus 838 ~ed~~~~l~~l~~l~~--~~~~i~~~~~~P~~-g-T~l~~~~~~~~~~~~~~ia~~R 890 (965)
++|+...++++++++. .-..+.++.|.|++ | .| ....+++-.++.+-++-.-
T Consensus 270 D~E~~~iIe~A~~iGaGkk~p~lgiQkyipyk~GRkp-~~~k~~~fkeFYrwLrelE 325 (414)
T COG2100 270 DDEMPKIIEWAREIGAGKKWPPLGIQKYIPYKFGRKP-VIAKVWPFKEFYRWLRELE 325 (414)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCcceEEeeeecccCCc-cccccCcHHHHHHHHHHHH
Confidence 8999999999999875 22334577778875 2 22 2234566677776665543
No 409
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.46 E-value=4.1e-12 Score=143.15 Aligned_cols=243 Identities=16% Similarity=0.136 Sum_probs=158.3
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
...+.++...+|+++++++.+ .+.+++++||+.|+..++.... .++++|++.++.|.+. ......
T Consensus 53 y~r~~~p~~~~le~~lA~l~g--~~~av~~~sG~~Ai~~~l~al~--------~~Gd~Vi~~~~~y~~t-~~~~~~---- 117 (391)
T TIGR01328 53 YSRLGNPTVSNLEGRIAFLEG--TEAAVATSSGMGAIAATLLTIL--------KAGDHLISDECLYGCT-FALLEH---- 117 (391)
T ss_pred eeCCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEecCcchHH-HHHHHH----
Confidence 356677888999999999995 4668899999999998887653 2567788887766443 111110
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
........+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.+
T Consensus 118 ----~~~~~G~~~~~vd~-----------------~d~e~l~~~i~---~~tklV~le~-p~Np~G~v~d----l~~I~~ 168 (391)
T TIGR01328 118 ----ALTKFGIQVDFINM-----------------AIPEEVKAHIK---DNTKIVYFET-PANPTMKLID----MERVCR 168 (391)
T ss_pred ----HHhcCCeEEEEECC-----------------CCHHHHHHhhc---cCCeEEEEEC-CCCCCCcccC----HHHHHH
Confidence 00011112333332 25777887774 3567888887 7899998876 999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCccc-ceeeeecHHHHHhhhccCCcccccccCC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLP-LSLVMTTDKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~p-ig~v~~~~~i~~~~~~~~~~~~~~~~~t 527 (965)
+|+++|+++|+||++. .+..+.. .+...|+++ ++|.++|...+ .|++++++++++.+.... .....+
T Consensus 169 la~~~gi~livD~a~a-~~~~~~~-----~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~----~~~~~g 238 (391)
T TIGR01328 169 DAHSQGVKVIVDNTFA-TPMLTNP-----VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVG----IKDMTG 238 (391)
T ss_pred HHHHcCCEEEEECCCc-hhccCCc-----hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHH----HHhCCC
Confidence 9999999999999985 2222221 233467764 67999863245 467778888887665310 000112
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
...+|..++.++..|+.+. ...++.+++.+++.+.|++.. .+|++. ..++-|.+++|++.
T Consensus 239 ~~l~~~~a~l~l~~L~tl~--~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~ 313 (391)
T TIGR01328 239 SVISPFDAWLILRGLKTLN--IRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK 313 (391)
T ss_pred CCCCcHHHHHHHhCcCcHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC
Confidence 3457777777777675543 236667777888888886542 233322 13466889999985
No 410
>KOG1357|consensus
Probab=99.46 E-value=1.5e-12 Score=137.61 Aligned_cols=309 Identities=15% Similarity=0.126 Sum_probs=193.0
Q ss_pred CHHHHHHHHHHHhhcccc----ccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCce
Q psy8199 272 NSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK 347 (965)
Q Consensus 272 ~p~v~~av~~~~~~~~~~----~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~ 347 (965)
+-...+++.+.+++.+.. ....+..+...++.+..++..+ .+..+..+-|...|..-+-.. -++.
T Consensus 153 ~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g--~e~a~vF~mGf~TNs~~~p~l---------~~~g 221 (519)
T KOG1357|consen 153 VGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG--VEDAIVFSMGFATNSMNIPSL---------LGKG 221 (519)
T ss_pred CCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC--CcceEEEeccccccccCccee---------ecCC
Confidence 333444445555554332 1223678888999999999985 344443344555554444333 2455
Q ss_pred EEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---------
Q psy8199 348 KFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN--------- 418 (965)
Q Consensus 348 ~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--------- 418 (965)
..|..|.--|++-.....++|. ... .+.+||.++||++|++.
T Consensus 222 sLIiSDelNHaSi~~GaRLSgA-------------tiR----------------VfkHNdm~~LEr~Lrd~I~~gqP~Th 272 (519)
T KOG1357|consen 222 SLIISDELNHASLITGARLSGA-------------TTR----------------VFRHNDMQGLERLLRDAIVYGQPKTH 272 (519)
T ss_pred cceeeccccchheeccccccCc-------------eEE----------------EEecCCHHHHHHHHHHHHhcCCCCcC
Confidence 6677777888886555555541 111 12347899999998763
Q ss_pred -CCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccC--CCcccccccccccCCCc---cee--eec
Q psy8199 419 -HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG--CGRTGKFFACEHAEIWP---DFL--CLS 490 (965)
Q Consensus 419 -~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~~~~~~~~~p---Div--t~s 490 (965)
+.+...|++|. +.++.|.+.. |.++.+++++|.+.|+.||+++. .|++| .+.++++|+.| |++ ||.
T Consensus 273 rp~kki~iiveg-iysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tG-rgvce~~g~d~~dvDImMGtft 346 (519)
T KOG1357|consen 273 RPWKKILICVEG-IYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATG-RGVCEYFGVDPEDVDIMMGTFT 346 (519)
T ss_pred Ccchheeeeecc-ceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCC-cceeeccCCCchhheeecceeh
Confidence 22456788999 9999999998 88899999999999999999983 33444 35778888754 444 788
Q ss_pred cccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc-------ccHHHHHHHHHHHHHH
Q psy8199 491 KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-------DNILQRISQDMKKITK 563 (965)
Q Consensus 491 K~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~-------~~~~~~~~~~~~~l~~ 563 (965)
|+.++++ |++.+++++++.++.. .....++ | .-+|+.+.-.+.+++.+.- ....++++++..+++.
T Consensus 347 KSfga~G---Gyiagsk~lid~lrt~--s~~~~ya-t-~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~ 419 (519)
T KOG1357|consen 347 KSFGAAG---GYIAGSKELIDYLRTP--SPSALYA-T-SLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRW 419 (519)
T ss_pred hhccccc---ceecCcHHHHhhhccC--CCceeec-c-cCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHH
Confidence 8776542 6788999999988762 1112222 2 2345555566677777653 1256777888888888
Q ss_pred HHHcccCCCceeee-eceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--------CCEEEEeCCcccCHHHH
Q psy8199 564 ALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPPYILNKNEI 634 (965)
Q Consensus 564 ~L~~l~~~~~i~~v-~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~lR~~p~~~~t~~~i 634 (965)
.|+.. ++-.. .-......+-+. .......+.+.|+++++-+... ....||..+..++.|++
T Consensus 420 ~l~~~----gfivyG~~dSpVvplll~------~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~l 489 (519)
T KOG1357|consen 420 ELQKM----GFIVYGNNDSPVVPLLLY------GPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDL 489 (519)
T ss_pred hhhcC----cEEEecCCCCCcceeeec------CcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHH
Confidence 87664 11100 000100001111 0111224667888887655421 14678998899999999
Q ss_pred HHHHHhhhc
Q psy8199 635 QHMTSAIFQ 643 (965)
Q Consensus 635 ~~~~~~l~~ 643 (965)
+.+++.+..
T Consensus 490 d~~l~~i~~ 498 (519)
T KOG1357|consen 490 DRALEVIDR 498 (519)
T ss_pred HHHHHHHhh
Confidence 998887654
No 411
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.46 E-value=4.6e-12 Score=142.16 Aligned_cols=240 Identities=12% Similarity=0.126 Sum_probs=159.0
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
.++.++...+|++.++++.+ .+.+++++||++|+..++.... .++++|++.++.|.+...........
T Consensus 46 ~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all--------~~GD~Vl~~~p~y~~~~~~~~~~~~~-- 113 (382)
T TIGR02080 46 SRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTALL--------GPDDLLVAPHDCYGGTYRLLNALAKK-- 113 (382)
T ss_pred cCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhh--
Confidence 56788889999999999985 4789999999999999988663 35688999999997642111010000
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
....+.+++. .|+++++++++ +++.+|+++. ++|++|.+.+ +++|.++
T Consensus 114 -------~~~~v~~~d~-----------------~d~~~l~~ai~---~~tklV~l~~-p~NPtG~~~d----l~~I~~l 161 (382)
T TIGR02080 114 -------GCFRVLFVDQ-----------------GDEQALRAALA---QKPKLVLIET-PSNPLLRVVD----IAKICHL 161 (382)
T ss_pred -------cCeEEEEECC-----------------CCHHHHHHhcC---cCceEEEEEC-CCCCCCEecC----HHHHHHH
Confidence 0011122211 25678888875 3467777877 7999998887 8899999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCC-Ccccceeeee-cHHHHHhhhccCCcccccccCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~g-G~~pig~v~~-~~~i~~~~~~~~~~~~~~~~~t 527 (965)
|+++|+++|+||+|..+ .... -.....|++ +++|.++| +....|++++ ++++.+.+.. +....+
T Consensus 162 a~~~g~~vvvD~a~~~~-~~~~-----pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~------~~~~~g 229 (382)
T TIGR02080 162 AKAVGAVVVVDNTFLSP-ALQN-----PLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAW------WANNLG 229 (382)
T ss_pred HHHcCCEEEEECCCccc-ccCC-----chhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHH------HHHccC
Confidence 99999999999999632 1111 112235776 57898875 2246777766 5667665543 122234
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~ 589 (965)
...+|+.+..++..|+.+... .++..++...+.+.|++.. .+|++.. ..|.|.|+.|++.
T Consensus 230 ~~~sp~~a~l~lr~l~tl~~R--~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 304 (382)
T TIGR02080 230 VTGGAFDSYLTLRGLRTLVAR--MRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK 304 (382)
T ss_pred CCCCHHHHHHHHcccchHHHH--HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec
Confidence 457888888888777766432 5566677777777776431 2333221 2467889999985
No 412
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.46 E-value=6.4e-12 Score=140.54 Aligned_cols=279 Identities=14% Similarity=0.109 Sum_probs=173.2
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
..++++...+|+++++++. + +.+++++||++|+..++.... .++++||+.+++|+++.......
T Consensus 46 ~ry~~p~~~~Le~~lA~l~--~-~~~v~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~y~~~~~~~~~~----- 109 (366)
T PRK07582 46 GRASNPTWRALEAALGELE--G-AEALVFPSGMAAITAVLRALL--------RPGDTVVVPADGYYQVRALAREY----- 109 (366)
T ss_pred ECCCCccHHHHHHHHHHHc--C-CCEEEECCHHHHHHHHHHHhc--------CCCCEEEEeCCCcHhHHHHHHHH-----
Confidence 4577888899999999988 3 467777889999998886543 35688999999998763321100
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
.......+.+++... +. +. + .+++..|++|. ++|++|.+.+ +++|.++
T Consensus 110 ----l~~~G~~v~~v~~~~----------------~~---~~-~---~~~t~lV~le~-p~NPtg~v~d----i~~I~~~ 157 (366)
T PRK07582 110 ----LAPLGVTVREAPTAG----------------MA---EA-A---LAGADLVLAET-PSNPGLDVCD----LAALAAA 157 (366)
T ss_pred ----HhcCeEEEEEECCCC----------------hH---HH-h---ccCceEEEEEC-CCCCCCCccC----HHHHHHH
Confidence 000111234444321 10 11 1 13466777777 7888887766 9999999
Q ss_pred HHhcCCeEEEecccc-CCCcccccccccccCCCccee--eeccccCC-Ccccceeeeec-HHHHHhhhccCCcccccccC
Q psy8199 452 CNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 452 ~~~~g~llI~DEv~t-g~gr~G~~~~~~~~~~~pDiv--t~sK~l~g-G~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~ 526 (965)
|+++|+++|+||+|. .+| . .-.....|++ +++|.++| +..++|+++++ +++++.+.. +....
T Consensus 158 a~~~g~~lvVD~t~~~~~~---~----~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~------~~~~~ 224 (366)
T PRK07582 158 AHAAGALLVVDNTTATPLG---Q----RPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVER------WRLLA 224 (366)
T ss_pred HHHcCCEEEEECCCCCccc---c----CchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHH------HHHHh
Confidence 999999999999984 222 1 1112346777 46899876 22578888874 677776653 11112
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccC-----CCceee----------eeceeEEEEEEEeec
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKIIN----------FRQKGMIWAFDVIIE 591 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~i~~----------v~g~G~~~~i~~~~~ 591 (965)
+...+|..+..++..|+.+. -..++..++...+.+.|++... +|++.. ..|.|.++.|++.
T Consensus 225 g~~~~~~~a~l~~r~l~tl~--~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-- 300 (366)
T PRK07582 225 GAIPGPFEAWLAHRSLGTLG--LRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-- 300 (366)
T ss_pred CCCCCHHHHHHHHhccccHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--
Confidence 23456888777777776443 2346777788888888876432 333321 1257889999985
Q ss_pred CccchhhHHHHHHHHHHHcCcEEe--------------------ecCCEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 592 DPEQIETFSKKFFVAALKNELLLR--------------------PIGNTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 592 ~~~~~~~~~~~~~~~l~~~Gi~~~--------------------~~~~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
+ .. ...+.+.+.+++.. ..++.||+++.+-..++.++++.+++.
T Consensus 301 ~----~~---~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 301 D----AA---AAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred C----HH---HHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 2 11 12233333344332 012579999887777777776666553
No 413
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.45 E-value=2.9e-11 Score=136.66 Aligned_cols=338 Identities=9% Similarity=-0.001 Sum_probs=194.3
Q ss_pred CCHHHHHHHHHHHhh-ccccccCCCCcHHHHHHHHHHHhhcCCC-C-CeEEE--cCChhHHHHHHHHHHHHHHHh----c
Q psy8199 271 SNSYINKALKNQLNK-LEHVMLSNLTHKPVIKLSEKLSSLTQYK-L-GHCFY--GSDGASAVEVALKMSFHYWYN----K 341 (965)
Q Consensus 271 ~~p~v~~av~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~~~-~-~~v~~--~~sGseA~~~Al~~a~~~~~~----~ 341 (965)
.+|++.+++...+.. .......+...+..++..+.++++++.+ . +++.| |+||||||..|++.++..+.. .
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 489999999888863 2222112333466778888899998754 2 35655 899999999999988753221 1
Q ss_pred CCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCc
Q psy8199 342 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNK 421 (965)
Q Consensus 342 g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 421 (965)
|.......++....-|-+..-+....+ ..+..+|.....+. .|+++|+++|.+ +
T Consensus 133 g~~~~~~~ii~s~~~H~sv~ka~~~lg------------~~v~~i~~d~~~~~-----------vd~~~L~~~i~~---~ 186 (431)
T TIGR01788 133 GKPTDKPNLVMGSNVQVCWEKFARYFD------------VELREVPMDPGRYV-----------IDPEQVVEAVDE---N 186 (431)
T ss_pred CCCCCCcEEEEcCcchHHHHHHHHHcC------------ceeEEEecCCCcee-----------eCHHHHHHHHhh---C
Confidence 211112234444444554322222111 23445554321111 378999999863 3
Q ss_pred EEEEEEccccccCCCcccCChHHHHHHHHHHHhc------CCeEEEeccccCCCc---ccc-cccccccCCCcceeeecc
Q psy8199 422 IAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY------NIHLIADEIAVGCGR---TGK-FFACEHAEIWPDFLCLSK 491 (965)
Q Consensus 422 ~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tg~gr---~G~-~~~~~~~~~~pDivt~sK 491 (965)
+.+|++.- +++++|.+.| +++|.++|+++ |+++++|-+|.|+-. .++ .+.+. ....|.++++-
T Consensus 187 t~lV~~t~-g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s~ 259 (431)
T TIGR01788 187 TIGVVCIL-GTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVSG 259 (431)
T ss_pred CeEEEEEe-CCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEECc
Confidence 45666665 7899999999 99999999999 999999999986421 122 11111 22468899885
Q ss_pred cc-CCCcccceeeeecHH--HHHhhhccCCcc-cccccCCCCCCHH--HHHHHHHHHHHHhcc---cHHHHHHHHHHHHH
Q psy8199 492 GI-TGGYLPLSLVMTTDK--IYNSIYYKNNIN-IFLHSHSYSGNPL--ACCAALATLEIFNKD---NILQRISQDMKKIT 562 (965)
Q Consensus 492 ~l-~gG~~pig~v~~~~~--i~~~~~~~~~~~-~~~~~~t~~~~~~--~~aaa~a~L~~~~~~---~~~~~~~~~~~~l~ 562 (965)
.- +.|...+|+++.+++ +.+.+......- .-....|..+... ..++...+|..+... ...++..++.++|.
T Consensus 260 HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~ 339 (431)
T TIGR01788 260 HKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLA 339 (431)
T ss_pred hhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 33 324467888888764 333332100000 0000112222221 223334445444433 34566667788888
Q ss_pred HHHHcccCCCceeeee--ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEe----ec---C-CEEEEeCCcccCHH
Q psy8199 563 KALTSLITHPKIINFR--QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR----PI---G-NTVYLMPPYILNKN 632 (965)
Q Consensus 563 ~~L~~l~~~~~i~~v~--g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~---~-~~lR~~p~~~~t~~ 632 (965)
++|++. |.+..+. ....++.|.+. .+. ........+.+.|.++|+.+. |. + -.+|++.-.-++.+
T Consensus 340 ~~L~~~---~~~el~~~~~~~~iV~Fr~~-~~~-~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~ 414 (431)
T TIGR01788 340 EEIAKL---GPFEIISDGSGIPLVAFKLK-DDA-DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRD 414 (431)
T ss_pred HHHHhC---CCEEEeeCCCCceEEEEEeC-CCC-CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHH
Confidence 877665 4444222 24556666654 111 001113467888999998642 21 1 25788755556788
Q ss_pred HHHHHHHhhhcccc
Q psy8199 633 EIQHMTSAIFQTFN 646 (965)
Q Consensus 633 ~i~~~~~~l~~~~~ 646 (965)
.++++++.+..++.
T Consensus 415 ~~~~~~~~~~~~~~ 428 (431)
T TIGR01788 415 LAELLIEDIEAALA 428 (431)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888887765543
No 414
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=99.45 E-value=6.8e-12 Score=140.51 Aligned_cols=174 Identities=19% Similarity=0.285 Sum_probs=137.0
Q ss_pred EeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHH
Q psy8199 681 LAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVK 760 (965)
Q Consensus 681 ~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~ 760 (965)
+...+++ |+.|+.+|.||........ ....++.+++.+.+.++.+.|+..+.|+|| +|+... .+.++++.++
T Consensus 7 ~~l~iei-T~~CNl~C~~C~~~~~~~~---~~~~l~~e~~~~ii~~~~~~g~~~v~~~GG-EPll~~---~~~~ii~~~~ 78 (358)
T TIGR02109 7 LWLLAEL-THRCPLQCPYCSNPLELAR---RKAELTTEEWTDVLTQAAELGVLQLHFSGG-EPLARP---DLVELVAHAR 78 (358)
T ss_pred cEEEEee-ccccCcCCCCCCCChhccc---ccCCCCHHHHHHHHHHHHhcCCcEEEEeCc-cccccc---cHHHHHHHHH
Confidence 3455677 9999999999976432111 223489999999999999999999999876 465553 3566777777
Q ss_pred hcCcE--eEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCC-CCHHHHHHHHHHHHHcCCceeeeEEEecCC
Q psy8199 761 KIGLE--TCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGLSE 836 (965)
Q Consensus 761 ~~~~~--i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~-~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~e 836 (965)
+.++. +.+|...++++.++.|+++|++.+.+++++ +++.+.++++. .+++..+++++.++++|+++...+++ ..+
T Consensus 79 ~~g~~~~l~TNG~ll~~e~~~~L~~~g~~~v~iSldg~~~e~~d~~rg~~g~f~~v~~~i~~l~~~g~~v~v~~vv-~~~ 157 (358)
T TIGR02109 79 RLGLYTNLITSGVGLTEARLDALADAGLDHVQLSFQGVDEALADRIAGYKNAFEQKLAMARAVKAAGLPLTLNFVI-HRH 157 (358)
T ss_pred HcCCeEEEEeCCccCCHHHHHHHHhCCCCEEEEeCcCCCHHHHHHhcCCccHHHHHHHHHHHHHhCCCceEEEEEe-ccC
Confidence 66654 455556689999999999999999999999 78999998764 47999999999999999988665544 368
Q ss_pred CHHHHHHHHHHHHhcCCCCCceeeccccc
Q psy8199 837 SRDQRAELIFQLANLNPYPESVPINNLVQ 865 (965)
Q Consensus 837 t~ed~~~~l~~l~~l~~~~~~i~~~~~~P 865 (965)
+.+++.+.++++.+++ ++.+.+..+.+
T Consensus 158 N~~~l~~~~~~~~~lg--~~~i~~~~~~~ 184 (358)
T TIGR02109 158 NIDQIPEIIELAIELG--ADRVELATTQY 184 (358)
T ss_pred CHHHHHHHHHHHHHcC--CCEEEEEeeec
Confidence 9999999999999999 78777764433
No 415
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.44 E-value=7.2e-12 Score=141.42 Aligned_cols=241 Identities=14% Similarity=0.133 Sum_probs=156.4
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
.+.+.++...+|+++++++.+ .+..++++||++|+..++..... ++++|++..+.|++.....
T Consensus 54 y~R~~~p~~~~Le~~lA~l~g--~~~~v~~~sG~~Ai~~~l~all~--------pGD~Vvv~~p~Y~~t~~~~------- 116 (405)
T PRK08776 54 YTRSGNPTRDLLGEALAELEG--GAGGVITATGMGAINLVLNALLQ--------PGDTLVVPHDAYGGSWRLF------- 116 (405)
T ss_pred ccCCCChHHHHHHHHHHHHhC--CCceEEEcCHHHHHHHHHHHHhC--------CCCEEEEccCCchHHHHHH-------
Confidence 356777888899999999886 34567778899999888876632 5688999999997632100
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
+.........+..++. .|+++|+++++ +++.+|+++. ++|++|.+.+ +++|.+
T Consensus 117 --~~~~~~~g~~v~~v~~-----------------~d~~~l~~~i~---~~tklV~l~~-P~NPtG~v~d----l~~I~~ 169 (405)
T PRK08776 117 --NALAKKGHFALITADL-----------------TDPRSLADALA---QSPKLVLIET-PSNPLLRITD----LRFVIE 169 (405)
T ss_pred --HHHHHhcCcEEEEECC-----------------CCHHHHHHhcC---cCCeEEEEEC-CCCCCCccCC----HHHHHH
Confidence 0000001112233322 25678888775 2456677776 6899998865 999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCC-cccceeeee-cHHHHHhhhccCCcccccccC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG-YLPLSLVMT-TDKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG-~~pig~v~~-~~~i~~~~~~~~~~~~~~~~~ 526 (965)
+|+++|+++|+||+|...... ... ....|+++ .+|.++|. ....|++++ ++++.+.+.. .....
T Consensus 170 la~~~gi~vIvD~a~a~~~~~---~pl---~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~------~~~~~ 237 (405)
T PRK08776 170 AAHKVGALTVVDNTFLSPALQ---KPL---EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVW------WANAL 237 (405)
T ss_pred HHHHcCCEEEEECCCcccccC---Ccc---cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHH------HHHhc
Confidence 999999999999998632111 111 23457775 46888752 234676666 4666665543 11122
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
.+..+|+.+.+++..|+.+. ...++..++...+.+.|++.. .+|++. ...|-|.|++|++.
T Consensus 238 g~~~s~~~a~l~~~gl~tl~--~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 238 GLTGSPFDAFLTLRGLRTLD--ARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred CCCCCHHHHHHHHhhhCcHH--HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 34568999988888777663 256777778888888876542 133322 12467889999985
No 416
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.44 E-value=8.7e-12 Score=138.80 Aligned_cols=235 Identities=16% Similarity=0.201 Sum_probs=155.4
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
.+++.++...+|+++++++. +.++++.++||++|+.+++.+. .++++||+....|++..... ...
T Consensus 48 Y~R~~~p~~~~le~~lA~le--g~~~~v~~~sG~aAi~~~l~~l---------~~GD~VI~~~~~yg~~~~~~-~~~--- 112 (364)
T PRK07269 48 YTRTKNPTRAKLEETLAAIE--SADYALATSSGMSAIVLAFSVF---------PVGSKVVAVRDLYGGSFRWF-NQQ--- 112 (364)
T ss_pred eeCCCCccHHHHHHHHHHHh--CCCeEEEeCCHHHHHHHHHHHh---------CCCCEEEEecCCcCchHHHH-HHH---
Confidence 35677888999999999998 5689999999999999998533 25688999888875542110 000
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
... .++ .+... .|++++++++. +++.+|++|. +.|++|.+.+ +++|.+
T Consensus 113 -----~~~--~~~-~~~~~----------------~d~~~l~~~i~---~~TklV~les-P~NPtg~~~d----i~~I~~ 160 (364)
T PRK07269 113 -----EKE--GRF-HFTYA----------------NTEEELIAAIE---EDTDIVYIET-PTNPLMVEFD----IEKVAK 160 (364)
T ss_pred -----Hhc--CcE-EEEec----------------CCHHHHHHhcC---cCceEEEEEC-CCCCCCeeeC----HHHHHH
Confidence 000 011 01110 25678888885 3567888888 7899998776 999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCcceeee--ccccCC-Ccccceeeee-cHHHHHhhhccCCcccccccC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITG-GYLPLSLVMT-TDKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~--sK~l~g-G~~pig~v~~-~~~i~~~~~~~~~~~~~~~~~ 526 (965)
+|+++|+++|+||++... . ...-.+...|++++ +|.++| |-.-.|++++ ++++++.+.. .....
T Consensus 161 la~~~gi~vvvD~t~~~~-~-----~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~------~~~~~ 228 (364)
T PRK07269 161 LAHAKGAKVIVDNTFYSP-I-----YQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY------NLNTT 228 (364)
T ss_pred HHHHcCCEEEEECCCccc-c-----cCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH------HHHHh
Confidence 999999999999996321 1 11223456788865 588876 2112356666 4667665543 11111
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceee--eeceeEEEEEEEe
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN--FRQKGMIWAFDVI 589 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~--v~g~G~~~~i~~~ 589 (965)
....+|..++.++..|+.+. ...++-+++..++.+.|++ +|.+.. .+|.|.+++|++.
T Consensus 229 G~~~s~~~a~l~~~~L~tL~--~r~~~~~~na~~~a~~L~~---~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 229 GAVLSPFDSYLLMRGLKTLS--LRMERSTANAQEVVAFLKK---SPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred CCCCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHh---CCCccEEeCCCcCcEEEEEEC
Confidence 23568888888888886653 2356666777777776654 565542 3678999999985
No 417
>COG2516 Biotin synthase-related enzyme [General function prediction only]
Probab=99.44 E-value=1.9e-12 Score=131.73 Aligned_cols=250 Identities=17% Similarity=0.282 Sum_probs=173.6
Q ss_pred cCCCCCCCCCCCCCCcCCCC--c-----ccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHH-
Q psy8199 689 TGGCTEDCGYCPQSTHYNTE--I-----TATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVK- 760 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~--~-----~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~- 760 (965)
-.+|..+|.||++++..... . ..|+....+++++...+... .+++++++.-..+ ....++..++++++
T Consensus 38 ~~~c~~~ca~c~~ar~s~a~p~~~~lsRv~w~~v~l~~~~~~~~~~~g-~~~rici~~i~~p---~~~~d~~~i~~~~~~ 113 (339)
T COG2516 38 PGGCIADCAYCPQARSSTANPPKKVLSRVEWPAVALEEVLKRLFYDLG-NFKRICIQQIAYP---RALNDLKLILERLHI 113 (339)
T ss_pred CCceeechhhChhhhhcccCCCcceeeecccccchHHHHHhHhhhhhc-ccccccceeeccc---cccchhhhhhhhhhh
Confidence 48999999999987632211 0 13444456777766554332 3788888777655 23445555666666
Q ss_pred hcCcEeEEe--cCCCC-HHHHHHHHHhCCCeEeccCCC-CHHHHhcccC----CCCHHHHHHHHHHHHH-cC-CceeeeE
Q psy8199 761 KIGLETCLT--LGMLN-ENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIS----TRDYENRLNTLKNVRN-VG-INICCGG 830 (965)
Q Consensus 761 ~~~~~i~~~--~~~~~-~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~----~~~~~~~~~~i~~~~~-~G-i~v~~~~ 830 (965)
+.+..++++ ..... .+.+...++.|.+++.+.++. ++++|+++.+ .|+|++..+.++.+.+ .| -++..|+
T Consensus 114 ~~~~~itiseci~~~~~~~~l~e~~klg~d~l~V~~daa~~~~~e~v~~~s~s~~S~e~~~~~l~~~~~~~~k~rv~ihl 193 (339)
T COG2516 114 RLGDPITISECITAVSLKEELEEYRKLGADYLGVAEDAANEELFEKVRKTSGSPHSWERYWEFLEKVAEAFGKGRVGIHL 193 (339)
T ss_pred ccCCceehhhhhhcccchHHHHHHHhcchhhhhHHHHhcCHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccCCcceeE
Confidence 456555554 33333 899999999999999999999 9999999943 4789999999999777 45 6899999
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchh
Q psy8199 831 IIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGET 910 (965)
Q Consensus 831 i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~~i~i~~~~~~~~~~ 910 (965)
++|+||+++++++++..++..+ -.+.+..|.|..||.|++..+++.+.+.++ .++|.++.+-.+.+.... |.+
T Consensus 194 iVglGesD~~~ve~~~~v~~~g---~~v~Lfaf~P~~gt~me~r~~~pve~Yrk~-q~a~yli~~G~v~~~~~~---fde 266 (339)
T COG2516 194 IVGLGESDKDIVETIKRVRKRG---GIVSLFAFTPLKGTQMENRKPPPVERYRKI-QVARYLIGNGEVDLEDFE---FDE 266 (339)
T ss_pred EeccCCchHHHHHHHHHHHhcC---ceEEEEEecccccccccCCCCCcHHHHHHH-HHHHHHHhcCccchhhcc---ccc
Confidence 9999999999999999999998 778999999999999999988666665555 677788876655544322 333
Q ss_pred hHHHHhhcCccEE--eeCCccccCCCCC----ChhhHHHHHHcCCCcch
Q psy8199 911 TQAFCFLAGANSI--FYGDKLLTTDNTK----TNDDSKLLKKLGINTRN 953 (965)
Q Consensus 911 ~~~~~l~~Gan~~--~~g~~~~t~~~~~----~~~~~~~~~~~g~~~~~ 953 (965)
...+ +. +.-.. +.-..+.|.+|.+ ..+ .|++--|+.+..
T Consensus 267 ~g~l-I~-~ip~~~ev~p~pf~t~gC~~cnRP~~n--~~~e~p~r~~~n 311 (339)
T COG2516 267 FGNL-ID-SIPKVMEVPPSPFRTRGCPGCNRPYPN--FMFELPGREPYN 311 (339)
T ss_pred ccce-ec-ccccccCCCccccccCCCCCCCCCCcc--hHhhccCCcccc
Confidence 2222 11 11111 1112355666642 222 677777776544
No 418
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.44 E-value=5.6e-12 Score=142.67 Aligned_cols=242 Identities=15% Similarity=0.153 Sum_probs=156.1
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
..+..+...+|++.++++.+ .+..+.++||+.|+..+++... .++++||+..+.| |.+......
T Consensus 60 ~r~~~p~~~~le~~lA~l~g--~~~~i~~~sG~~Al~~~l~~ll--------~~Gd~Viv~~~~y-~~t~~~~~~----- 123 (403)
T PRK07503 60 SRISNPTLALLEQRMASLEG--GEAAVALASGMGAITATLWTLL--------RPGDEVIVDQTLY-GCTFAFLHH----- 123 (403)
T ss_pred eCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHc--------CCCCEEEEccCcc-chHHHHHHH-----
Confidence 45677788999999999985 3557788899999999987542 3567888887766 332211100
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
........+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.++
T Consensus 124 ---~~~~~G~~v~~vd~-----------------~d~~~l~~~i~---~~tklV~le~-p~NPtG~~~d----i~~I~~l 175 (403)
T PRK07503 124 ---GLGEFGVTVRHVDL-----------------TDPAALKAAIS---DKTRMVYFET-PANPNMRLVD----IAAVAEI 175 (403)
T ss_pred ---HHhhCCEEEEEeCC-----------------CCHHHHHHhcC---ccCcEEEEeC-CCCCCCeeeC----HHHHHHH
Confidence 00011112333332 25678888875 3567888887 7999998876 8999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCC-CcccceeeeecHHHHHhhhccCCcccccccCCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 528 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~g-G~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~ 528 (965)
|+++|+++|+|++|... ..+.. .+...|++ +++|.++| |-...|++++++++++.+.... .......
T Consensus 176 a~~~gi~lIvD~a~a~~-~~~~~-----l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~----~~~~~g~ 245 (403)
T PRK07503 176 AHGAGAKVVVDNTYCTP-YLQRP-----LELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEG----LKDMTGA 245 (403)
T ss_pred HHHcCCEEEEECCCccc-ccCCc-----hhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhh----HHhCcCC
Confidence 99999999999999632 22221 23346776 46899987 3245788888888877765200 1112235
Q ss_pred CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEe
Q psy8199 529 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVI 589 (965)
Q Consensus 529 ~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~ 589 (965)
..+|+.++.++..|+.+.. ..++..++..++.+.|++.. .+|+... ..+.|.++.+++.
T Consensus 246 ~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~ 319 (403)
T PRK07503 246 VMSPFDAFLLMRGLKTLAL--RMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELK 319 (403)
T ss_pred CCCHHHHHHHHcCcchHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEC
Confidence 5688888888887776532 23444566666666665431 1333211 2346888888885
No 419
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.43 E-value=7.5e-12 Score=142.03 Aligned_cols=247 Identities=16% Similarity=0.184 Sum_probs=157.1
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
+++..++...+|+++++++.+ .+.+++++||++|+.+++..+.. ++++|++..+.|++.. ......
T Consensus 52 y~r~~~pt~~~Le~~lA~l~g--~~~~l~~ssG~~Ai~~al~al~~--------~Gd~Vl~~~~~Y~~t~-~~~~~~--- 117 (425)
T PRK06084 52 YTRIMNPTNDVLEQRVAALEG--GVGALAVASGMAAITYAIQTIAE--------AGDNIVSVAKLYGGTY-NLLAHT--- 117 (425)
T ss_pred ccCCCCchHHHHHHHHHHHhC--CCceeEehhHHHHHHHHHHHHhC--------CCCEEEEeCCCcchHH-HHHHHh---
Confidence 355677788899999999985 45778899999999999987643 4678999999998642 211100
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
.......+.+++. .|++++++++++ ++.+|++|+ ++|++|.+.+ +++|.+
T Consensus 118 -----l~~~gi~v~~~d~-----------------~d~e~le~ai~~---~tklV~les-p~NPtG~v~d----l~~I~~ 167 (425)
T PRK06084 118 -----LPRIGIETRFAAH-----------------DDIAALEALIDE---RTKAVFCES-IGNPAGNIID----IQALAD 167 (425)
T ss_pred -----cccceeEEEEECC-----------------CCHHHHHHHhcc---CCcEEEEeC-CCCCCCeecC----HHHHHH
Confidence 0000112223322 267888888853 567888888 8999998887 899999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccceeeeec-HHH-HHhh-------hcc---
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTT-DKI-YNSI-------YYK--- 516 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pig~v~~~-~~i-~~~~-------~~~--- 516 (965)
+|++||+++|+|+++. .+... ......+|++ +++|.++|....+|.+++. +.+ .... ...
T Consensus 168 la~~~~i~vVvD~a~a-~~~~~-----~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~ 241 (425)
T PRK06084 168 AAHRHGVPLIVDNTVA-TPVLC-----RPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPS 241 (425)
T ss_pred HHHHcCCEEEEECCCc-ccccC-----ChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcc
Confidence 9999999999999986 22221 2223457877 5689998744677766653 321 0000 000
Q ss_pred ----------CC-c------ccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCce
Q psy8199 517 ----------NN-I------NIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKI 574 (965)
Q Consensus 517 ----------~~-~------~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i 574 (965)
+. . .....+.....+|..++.++..|+.+.. ..++-.++..++.+.|++.. .+|++
T Consensus 242 ~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l 319 (425)
T PRK06084 242 YHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLAL--RMERHTENALKVARYLQQHPQVAWVKYAGL 319 (425)
T ss_pred cccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00 0 0001122334577777777777765532 35666777777888777542 23433
Q ss_pred ee----------eec-eeEEEEEEEe
Q psy8199 575 IN----------FRQ-KGMIWAFDVI 589 (965)
Q Consensus 575 ~~----------v~g-~G~~~~i~~~ 589 (965)
.. ..+ -|.|++|++.
T Consensus 320 ~~~p~~~~~~~~~~g~~gg~~s~~~~ 345 (425)
T PRK06084 320 PDHPEHELARRYMGGKPASILSFGIK 345 (425)
T ss_pred CCcccHHHHHHhCCCCcceEEEEEec
Confidence 21 234 5889999985
No 420
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.43 E-value=7.9e-12 Score=142.32 Aligned_cols=166 Identities=14% Similarity=0.136 Sum_probs=119.7
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
+.+.++...+|+++++++.+ .+.+++++||++|+..++..+.. ++++||+.++.|+|.... .
T Consensus 52 sr~~~p~~~~le~~lA~l~g--~~~~v~~~sG~~Ai~~al~~l~~--------~Gd~Vl~~~~~y~~t~~~-~------- 113 (418)
T TIGR01326 52 SRLMNPTTDVLEQRIAALEG--GVAALAVASGQAAITYAILNLAQ--------AGDNIVSSSYLYGGTYNL-F------- 113 (418)
T ss_pred ECCCChhHHHHHHHHHHHhC--CCeEEEEccHHHHHHHHHHHHhC--------CCCEEEEECCCcHHHHHH-H-------
Confidence 56678888999999999985 47899999999999999986643 567899999888774211 0
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
..........+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.++
T Consensus 114 -~~~~~~~G~~v~~v~~-----------------~d~~~l~~~l~---~~t~~V~le~-p~NPtg~v~d----l~~I~~l 167 (418)
T TIGR01326 114 -KHTLKRLGIEVRFVDP-----------------DDPEEFEKAID---ENTKAVFAET-IGNPAINVPD----IEAIAEV 167 (418)
T ss_pred -HHHHHHcCcEEEEECC-----------------CCHHHHHHhcC---cCCeEEEEEC-CCCCCCeecC----HHHHHHH
Confidence 0001111122334332 25788888875 3567888898 8999998876 8999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccceeeeecH
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTD 507 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pig~v~~~~ 507 (965)
|++||+++|+||++. .+. ........+|++ +++|.++|..+++|++++++
T Consensus 168 a~~~~i~livD~t~~-~~~-----~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 168 AHAHGVPLIVDNTFA-TPY-----LCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred HHHcCCEEEEECCCc-hhh-----cCCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 999999999999985 221 122223347887 57899988448999888854
No 421
>PRK05968 hypothetical protein; Provisional
Probab=99.43 E-value=7.1e-12 Score=141.29 Aligned_cols=260 Identities=11% Similarity=0.018 Sum_probs=160.2
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
..+..+...+|+++++++.+ .+..++++||+.|+..++.... .++++||+....|++.....
T Consensus 58 ~r~~~p~~~~le~~lA~l~g--~~~av~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~y~~t~~~~-------- 119 (389)
T PRK05968 58 SRGDNPTVRAFEEMLAKLEG--AEDARGFASGMAAISSTVLSFV--------EPGDRIVAVRHVYPDAFRLF-------- 119 (389)
T ss_pred cCCCChhHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHH--------
Confidence 45667778999999999985 4566777899999998887543 25688999998887641100
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
..........+.+++. .|++++++++. ++.+|++|. +.|+.+.+ ..+++|.++
T Consensus 120 -~~~~~~~G~~v~~vd~-----------------~d~~~l~~~i~----~tklV~ie~-pt~~~~~~----~dl~~i~~l 172 (389)
T PRK05968 120 -ETILKRMGVEVDYVDG-----------------RDEEAVAKALP----GAKLLYLES-PTSWVFEL----QDVAALAAL 172 (389)
T ss_pred -HHHHHHcCceEEEeCC-----------------CCHHHHHHhcc----cCCEEEEEC-CCCCCCcH----HHHHHHHHH
Confidence 0000111112333322 25677877762 345677776 56665544 349999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCC-CcccceeeeecHHHHHhhhccCCcccccccCCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 528 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~g-G~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~ 528 (965)
|++||+++|+|+++..+ ..... .. .| .|+++ ++|.++| |....|++++++++++.+... ..+. .+ .
T Consensus 173 a~~~gi~vivD~a~a~~-~~~~p--~~-~g--~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~--~~~~-~g--~ 241 (389)
T PRK05968 173 AKRHGVVTMIDNSWASP-VFQRP--IT-LG--VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAE--AYPY-LG--A 241 (389)
T ss_pred HHHcCCEEEEECCCcch-hccCc--hh-cC--CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHH--HHHh-CC--C
Confidence 99999999999998532 11111 11 23 47764 6799887 323457777888888766531 0011 12 2
Q ss_pred CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeee-------------eceeEEEEEEEeecCccc
Q psy8199 529 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINF-------------RQKGMIWAFDVIIEDPEQ 595 (965)
Q Consensus 529 ~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v-------------~g~G~~~~i~~~~~~~~~ 595 (965)
..+|..++.++..|+.+. ...++-.++.+++.+.|++. |.+..| .+.|.++.|++. ++
T Consensus 242 ~~~~~~A~~~l~~L~tl~--~r~~~~~~~a~~la~~L~~~---p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~--~~-- 312 (389)
T PRK05968 242 KLSPFEAWLLLRGLRTLP--LRMKAHEASALEIARRLKAH---PVVERVCHPALANHPPAGLSGTSGLFSFIFR--EG-- 312 (389)
T ss_pred CCChHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHHhC---CCccEEECCCCCCChHHhCCCCceEEEEEEC--CH--
Confidence 346777777777776552 23455556677777777654 433322 255778888885 21
Q ss_pred hhhHHHHHHHHHHHcCcEEeecC
Q psy8199 596 IETFSKKFFVAALKNELLLRPIG 618 (965)
Q Consensus 596 ~~~~~~~~~~~l~~~Gi~~~~~~ 618 (965)
....+|.+.|...++.+..++
T Consensus 313 --~~~~~f~~~L~~~~~~~s~G~ 333 (389)
T PRK05968 313 --IDVRAFADALKLFRLGVSWGG 333 (389)
T ss_pred --HHHHHHHHhCCccEEecCCCC
Confidence 124467777766665554433
No 422
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.43 E-value=1.3e-11 Score=139.20 Aligned_cols=240 Identities=13% Similarity=0.110 Sum_probs=152.6
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
..+..+...+|.++++++.+ .+..+.++||++|+..++..... ++++||+.++.|.+.........
T Consensus 56 ~r~~~p~~~~Le~~lA~~~g--~~~~i~~~sG~~Ai~~~l~all~--------~Gd~Vl~~~~~y~~t~~~~~~~~---- 121 (388)
T PRK07811 56 ARTGNPTRTALEEQLAALEG--GAYGRAFSSGMAATDCLLRAVLR--------PGDHIVIPNDAYGGTFRLIDKVF---- 121 (388)
T ss_pred cCCCCccHHHHHHHHHHHhC--CCceEEeCCHHHHHHHHHHHHhC--------CCCEEEEcCCCchHHHHHHHHhC----
Confidence 45667778899999999985 34556668899999999987643 56789999988865421110000
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
......+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.++
T Consensus 122 -----~~~gi~~~~~d~-----------------~d~e~l~~~i~---~~tklV~ie~-p~NPtg~~~d----l~~I~~l 171 (388)
T PRK07811 122 -----TRWGVEYTPVDL-----------------SDLDAVRAAIT---PRTKLIWVET-PTNPLLSITD----IAALAEL 171 (388)
T ss_pred -----cCCCeEEEEeCC-----------------CCHHHHHHhcC---cCCeEEEEEC-CCCCcceecC----HHHHHHH
Confidence 001112223222 26788888875 3567888887 7899988766 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCC-Ccccceeeeec-HHHHHhhhccCCcccccccCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~g-G~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~t 527 (965)
|+++|+++|+||++... ..+.. .+...|+++ ++|.++| |-...|+++++ +++.+.+.. ......
T Consensus 172 a~~~gi~lIvD~a~a~~-~~~~p-----~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~------~~~~~g 239 (388)
T PRK07811 172 AHDAGAKVVVDNTFASP-YLQQP-----LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAF------LQNGAG 239 (388)
T ss_pred HHHcCCEEEEECCCCcc-ccCCc-----hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHH------HHHhcC
Confidence 99999999999998632 22221 123467774 6799986 22345777764 566554432 111222
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
...+|..++.++..|+.+. ...++..++...+.+.|++.. .+|++. ...|-|.|++|++.
T Consensus 240 ~~~s~~~a~l~~~~L~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 314 (388)
T PRK07811 240 AVPGPFDAYLTLRGLKTLA--VRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA 314 (388)
T ss_pred CCCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC
Confidence 3345776666666665443 235556667777777776532 233321 13466889999985
No 423
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=99.43 E-value=1.5e-11 Score=129.86 Aligned_cols=196 Identities=13% Similarity=0.190 Sum_probs=143.2
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC---CCCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcE
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD---GATRFCMGAAWRELKDRDLDNIENMICEVKKIGLE 765 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~---g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 765 (965)
+.+|+++|.||..+..... ...+.++++++++++...... ....|.++|| +|+.. .+.+.++++.+++.++.
T Consensus 27 ~~gCnl~C~~C~~~~~~~~--~~~~~lt~eei~~~i~~~~~~~~~~~~~V~~sGG-EPll~--~~~~~~l~~~~k~~g~~ 101 (246)
T PRK11145 27 FQGCLMRCLYCHNRDTWDT--HGGKEVTVEELMKEVVTYRHFMNASGGGVTASGG-EAILQ--AEFVRDWFRACKKEGIH 101 (246)
T ss_pred ECCCCCcCCCCCCHHHCCC--CCCeEcCHHHHHHHHHHhHHHHhcCCCeEEEeCc-cHhcC--HHHHHHHHHHHHHcCCC
Confidence 7999999999986532111 122348999999998765432 3456888665 46443 56667888888888877
Q ss_pred eEE-ecCCC--CHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEecC--CCHH
Q psy8199 766 TCL-TLGML--NENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLS--ESRD 839 (965)
Q Consensus 766 i~~-~~~~~--~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~--et~e 839 (965)
+++ ++|.+ ..+.++.+.+ .+|.+.+++++ +++.++++.+. +.+..++.++.+.+.|+++...+++..| ++.+
T Consensus 102 i~l~TNG~~~~~~~~~~~ll~-~~d~v~islk~~~~e~~~~~~g~-~~~~~l~~i~~l~~~g~~v~i~~~li~g~nd~~~ 179 (246)
T PRK11145 102 TCLDTNGFVRRYDPVIDELLD-VTDLVMLDLKQMNDEIHQNLVGV-SNHRTLEFARYLAKRNQKTWIRYVVVPGWTDDDD 179 (246)
T ss_pred EEEECCCCCCcchHHHHHHHH-hCCEEEECCCcCChhhcccccCC-ChHHHHHHHHHHHhCCCcEEEEEEEECCCCCCHH
Confidence 655 45665 3578888776 48999999999 89999988764 4578889999999999977766666554 7778
Q ss_pred HHHHHHHHHHhcCCCCCceeeccccccCCC---------CCCCCCCCCHHHHHHHHHHHHHH
Q psy8199 840 QRAELIFQLANLNPYPESVPINNLVQIKGT---------PLYGSSILDPLEFIRTIAVARIT 892 (965)
Q Consensus 840 d~~~~l~~l~~l~~~~~~i~~~~~~P~~gT---------~l~~~~~~~~~~~~~~ia~~R~~ 892 (965)
++.+.++++++++. ...+.+.+|.|.++. ++.+.++++.+++.++..+++..
T Consensus 180 ei~~l~~~l~~l~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~~~~ 240 (246)
T PRK11145 180 SAHRLGEFIKDMGN-IEKIELLPYHELGKHKWEAMGEEYKLDGVKPPSKETMERVKGILEQY 240 (246)
T ss_pred HHHHHHHHHHhcCC-cceEEEecCCccchhHHHHcCCcccccCCCCCCHHHHHHHHHHHHHc
Confidence 99999999998851 456777788776543 44456778888888877777654
No 424
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.43 E-value=1e-11 Score=138.77 Aligned_cols=265 Identities=13% Similarity=0.081 Sum_probs=165.5
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
++..++....|+++++++.+ .+.+++++||++|+..++.... .++++||+.++.|+++.......
T Consensus 45 ~r~gnPt~~~lE~~lA~l~g--~~~~~~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~----- 109 (377)
T TIGR01324 45 GRRGTLTHFALQDAMCELEG--GAGCYLYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIV----- 109 (377)
T ss_pred cCCCCccHHHHHHHHHHHhC--CCcEEEECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHH-----
Confidence 34567788899999999985 5789999999999999998653 35788999999998753211000
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
.......+.++.. .+.+++++++. +++.+|++|. +.|++|.+.+ +++|.++
T Consensus 110 ----~~~~gi~v~~~d~-----------------~~~e~l~~~i~---~~tklV~les-p~Np~g~~~d----l~~I~~l 160 (377)
T TIGR01324 110 ----LKRMGVDITYYDP-----------------LIGEDIATLIQ---PNTKVLFLEA-PSSITFEIQD----IPAIAKA 160 (377)
T ss_pred ----HHhcCcEEEEECC-----------------CCHHHHHHhcC---CCceEEEEEC-CCCCCCcHHH----HHHHHHH
Confidence 0001111222211 11256777764 4578899998 7888887765 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCC-cccceeeeecHHHHHhhhccCCcccccccCCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG-YLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 528 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG-~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~ 528 (965)
|+++|+++|+|++|. .|..... .....|+++ ++|.++|. -.-.|+++++++.++.+.. .......
T Consensus 161 a~~~g~~livD~t~a-~g~~~~p-----l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~------~~~~~G~ 228 (377)
T TIGR01324 161 ARNPGIVIMIDNTWA-AGLLFKP-----LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLRE------HSYLMGQ 228 (377)
T ss_pred HHHcCCEEEEECCCc-cccccCc-----cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHH------HHHHhCC
Confidence 999999999999996 3333221 233568876 47998762 1345778888877665543 1111223
Q ss_pred CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEeecCc
Q psy8199 529 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVIIEDP 593 (965)
Q Consensus 529 ~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~~~~~ 593 (965)
..+|..+...+..|+.+.- ..++..++..++.+.|++-. .+|++.. ..+-|.|+.|++. ...
T Consensus 229 ~l~p~~a~~~~rgl~tl~~--R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~-~~~ 305 (377)
T TIGR01324 229 MVDADDAYTTLRGLRTLGV--RLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQ-RLT 305 (377)
T ss_pred CCCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEEC-CCC
Confidence 3467777777777765532 24555556566666665431 2343221 2366889999985 211
Q ss_pred cchhhHHHHHHHHHHHcCcEEeecC
Q psy8199 594 EQIETFSKKFFVAALKNELLLRPIG 618 (965)
Q Consensus 594 ~~~~~~~~~~~~~l~~~Gi~~~~~~ 618 (965)
...+.+|.+.|.-.++.+.-++
T Consensus 306 ---~~~~~~~~~~l~~~~~~~slG~ 327 (377)
T TIGR01324 306 ---QKQVHAFLDHLQLFGLGYSWGG 327 (377)
T ss_pred ---HHHHHHHHHhCCcceEeccCCC
Confidence 2224456666654454444333
No 425
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.42 E-value=1.4e-11 Score=138.49 Aligned_cols=239 Identities=14% Similarity=0.131 Sum_probs=154.6
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
.++.++...+|+++++++.+ .+.++.++||+.|+..++.... .++++|++..+.|++.......+ .
T Consensus 48 ~r~~np~~~~lE~~lA~l~g--~~~~l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~-~--- 113 (385)
T PRK08574 48 SREENPTLRPLEEALAKLEG--GVDALAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSL-E--- 113 (385)
T ss_pred ECCCCccHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHh-h---
Confidence 45677888899999999985 4678888999999999987653 25688999988887653211111 0
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
.....+.++. .|++++++++.+ .++.+|++|. ++|++|.+.+ +++|.++
T Consensus 114 ------~~g~~v~~~~------------------~d~~~l~~~i~~--~~tklV~ie~-p~NPtG~v~d----l~~I~~l 162 (385)
T PRK08574 114 ------KFGVKVVLAY------------------PSTEDIIEAIKE--GRTKLVFIET-MTNPTLKVID----VPEVAKA 162 (385)
T ss_pred ------ccCcEEEEEC------------------CCHHHHHHhcCc--cCceEEEEEC-CCCCCCEecC----HHHHHHH
Confidence 0001111211 145778887752 2567888888 8999998887 8899999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccc-eeeee-cHHHHHhhhccCCcccccccCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMT-TDKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pi-g~v~~-~~~i~~~~~~~~~~~~~~~~~t 527 (965)
|+++|+++|+|+++. .+-.... . ..| .|++ +++|.++|..-.+ |++++ ++++++.+.. +....+
T Consensus 163 a~~~gi~livD~t~a-~~~~~~~--l-~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~------~~~~~g 230 (385)
T PRK08574 163 AKELGAILVVDNTFA-TPLLYRP--L-RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWE------WRRRLG 230 (385)
T ss_pred HHHcCCEEEEECCCC-ccccCCh--h-hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHH------HHHhcC
Confidence 999999999999984 2211111 1 123 5776 4689997621233 53444 6777766543 111123
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------e--eceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------F--RQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v--~g~G~~~~i~~~ 589 (965)
...+|..++.++..|+.+.. ..++..++..++.+.|+... .+|++.. . .|-|.|+.|++.
T Consensus 231 ~~~~p~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~ 307 (385)
T PRK08574 231 TIMQPFEAYLVLRGLKTLEV--RFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVK 307 (385)
T ss_pred CCCCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeC
Confidence 34568878888777776542 35555667777777776532 2344321 1 257889999985
No 426
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.42 E-value=5.5e-11 Score=136.32 Aligned_cols=335 Identities=12% Similarity=0.009 Sum_probs=187.1
Q ss_pred ccccccccchhccCCCCCHHHHHHHHHHH-hhcccc-ccCC---C--CcHHHHHHHHH-HHhhcCCCCCeEEE---cCCh
Q psy8199 255 RYLDAISSWWVNLFGHSNSYINKALKNQL-NKLEHV-MLSN---L--THKPVIKLSEK-LSSLTQYKLGHCFY---GSDG 323 (965)
Q Consensus 255 ~ylD~~~~~~~~~lGh~~p~v~~av~~~~-~~~~~~-~~~~---~--~~~~~~~la~~-l~~~~~~~~~~v~~---~~sG 323 (965)
+-|.++++- .+..|.+.+|+...+ .++... .... + ..+..++++.. ..+.++...+.+.+ .+||
T Consensus 35 ~~l~liase-----n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG 109 (475)
T PLN03226 35 KGLELIASE-----NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSG 109 (475)
T ss_pred cCeeEecCC-----ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCch
Confidence 455655542 235799999998888 443211 1011 1 22333444443 44556433333333 4899
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCceEEEEEcC-----CccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCC
Q psy8199 324 ASAVEVALKMSFHYWYNKGFLNKKKFICLQN-----SYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGN 398 (965)
Q Consensus 324 seA~~~Al~~a~~~~~~~g~~~~~~vi~~~~-----~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (965)
+.||.+++....+ ++++|+..+- -.|++......++.... ....++++....
T Consensus 110 ~~AN~av~~aL~~--------pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~----------~~~~~~y~~~~~----- 166 (475)
T PLN03226 110 SPANFAVYTALLQ--------PHDRIMGLDLPHGGHLSHGYQTDGKKISATSI----------YFESMPYRLDES----- 166 (475)
T ss_pred HHHHHHHHHHhCC--------CCCEEEECCCCcCcchhhhhhhcccccccceE----------EEEeeeeeecCC-----
Confidence 9999999987743 6688888553 22443222222221100 001112211000
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCcEEEEEE-ccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccc
Q psy8199 399 SANEIARCAIFDLEILLKKNHNKIAAIII-EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC 477 (965)
Q Consensus 399 ~~~~~~~~d~~~le~~l~~~~~~~aaii~-ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~ 477 (965)
-...|+++|++++.+... ..|++ ++ + .|...+ +++|+++|+++|+++++|++|. +|-.+.....
T Consensus 167 ----~g~iD~d~Le~~l~~~~p--klIv~~~S-~---~s~~~D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~ 231 (475)
T PLN03226 167 ----TGLIDYDKLEKKAMLFRP--KLIIAGAS-A---YPRDWD----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAA 231 (475)
T ss_pred ----CCCcCHHHHHHHHhhcCC--eEEEEecC-c---CCCccC----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCC
Confidence 001378999998865432 33444 55 3 344444 7789999999999999999996 6555432211
Q ss_pred cccCCCcceee--eccccCCCcccceeeeecHHHH-----------HhhhccCCcccccccCCCCCCHHHHHHHHHHHHH
Q psy8199 478 EHAEIWPDFLC--LSKGITGGYLPLSLVMTTDKIY-----------NSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 544 (965)
Q Consensus 478 ~~~~~~pDivt--~sK~l~gG~~pig~v~~~~~i~-----------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~ 544 (965)
..++ ..|+++ ++|+|.|. +-|++++++++. +....-.... ..+.+-+.++..+++..++|+.
T Consensus 232 ~p~~-~~Div~~t~hK~L~GP--~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~--~~~~~g~p~~~~iaal~aAl~~ 306 (475)
T PLN03226 232 SPFE-YCDVVTTTTHKSLRGP--RGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAV--FPGLQGGPHNHTIAALAVALKQ 306 (475)
T ss_pred CCCC-CCeEEEecCcccccCC--CceEEEEchhhcccccCCCccHHHHHHHhcccc--CCccCCCchHHHHHHHHHHHHH
Confidence 1122 478774 67999773 235666776544 2210000111 1122223456677778888998
Q ss_pred Hhccc---HHHHHHHHHHHHHHHHHcccCCCceeeeec--eeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec--
Q psy8199 545 FNKDN---ILQRISQDMKKITKALTSLITHPKIINFRQ--KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-- 617 (965)
Q Consensus 545 ~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g--~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-- 617 (965)
+.+.+ +.+++.++.++|.+.|.+. ++.-+.+ ...+..+++. ..+ -...++.+.|.+.||++..+
T Consensus 307 i~~~~~~~~~~~~~~na~~L~~~L~~~----G~~l~~~~t~~hi~lv~~~-~~g----i~~~~~~~~L~~~~I~~nk~~~ 377 (475)
T PLN03226 307 AMTPEFKAYQKQVKANAAALANRLMSK----GYKLVTGGTDNHLVLWDLR-PLG----LTGSRVEKVLDLAHITLNKNAV 377 (475)
T ss_pred HhCcCHHHHHHHHHHHHHHHHHHHHhC----CCEEEcCCCCCCEEEEEcc-CCC----CCHHHHHHHHHHCCCEECCCCC
Confidence 86543 5788899999999988764 3332221 2355666663 111 01234667788899988532
Q ss_pred --------CCEEEE----eCCcccCHHHHHHHHHhhhcccc
Q psy8199 618 --------GNTVYL----MPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 618 --------~~~lR~----~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
...+|+ .....+++++++++.+.+.+++.
T Consensus 378 p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 378 PGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 245887 44566788899988888766554
No 427
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.41 E-value=4.6e-11 Score=141.98 Aligned_cols=314 Identities=13% Similarity=0.114 Sum_probs=190.8
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEcC-ChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCc
Q psy8199 294 LTHKPVIKLSEKLSSLTQYKLGHCFYGS-DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 372 (965)
Q Consensus 294 ~~~~~~~~la~~l~~~~~~~~~~v~~~~-sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 372 (965)
+.-+...++.+.+++++ +.+.+.+-+ ||+.|..+++.+.|.|+..+|+++|+++++.. +-||+........|
T Consensus 540 G~lq~i~elq~~l~eLt--Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~-saHgtNpasa~~~G---- 612 (954)
T PRK12566 540 GYRAMIDELEAWLCAIT--GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPS-SAHGTNPASAQMAG---- 612 (954)
T ss_pred CHHHHHHHHHHHHHHHH--CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecc-cccccCHHHHHHCC----
Confidence 34455678999999999 567666655 89999989999999999999998887766655 77777543322211
Q ss_pred cchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy8199 373 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 452 (965)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~ 452 (965)
..++.+|... .+. .|+++|+++++++.+++++|++.- + +..|.+. .-+++|.++|
T Consensus 613 --------ieVv~Vp~D~-~G~-----------iDle~L~a~I~~~~~~laaVmiT~-P-nt~Gv~e---~~V~eI~~ia 667 (954)
T PRK12566 613 --------MRVVIVECDP-DGN-----------VDLDDLKAKAAAAGDRLSCLMITY-P-STHGVYE---EGIREICEVV 667 (954)
T ss_pred --------CEEEEeccCC-CCC-----------cCHHHHHHHhhccCCCEEEEEEEe-c-CcCceec---chHHHHHHHH
Confidence 2344444421 111 489999999976667888888865 2 3344332 2289999999
Q ss_pred HhcCCeEEEeccccCCCcccccccccc-cCCCcceeeec--ccc----CCCcccceeeeecHHHHHhhhccC-----C--
Q psy8199 453 NNYNIHLIADEIAVGCGRTGKFFACEH-AEIWPDFLCLS--KGI----TGGYLPLSLVMTTDKIYNSIYYKN-----N-- 518 (965)
Q Consensus 453 ~~~g~llI~DEv~tg~gr~G~~~~~~~-~~~~pDivt~s--K~l----~gG~~pig~v~~~~~i~~~~~~~~-----~-- 518 (965)
+++|+++++|-++. .+-. .... -.+..|+++++ |.+ ++|+.-+|.+.+++++...+.... .
T Consensus 668 h~~Galv~vDgA~~-~a~~----~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~ 742 (954)
T PRK12566 668 HQHGGQVYMDGANL-NAQV----GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPD 742 (954)
T ss_pred HHcCCEEEEEeeCh-hhcc----CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCC
Confidence 99999999999885 2211 1111 13456998876 855 345445677777776665554311 0
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHH----HHHHHHHHHHHHcccCCCceeeeec-eeE-E--EEEEEee
Q psy8199 519 INIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI----SQDMKKITKALTSLITHPKIINFRQ-KGM-I--WAFDVII 590 (965)
Q Consensus 519 ~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~----~~~~~~l~~~L~~l~~~~~i~~v~g-~G~-~--~~i~~~~ 590 (965)
.+....+....++.+...++..-++.+-.+ +.++ ..+..++.++|.+... +.. .+ .+. + +.+.+.
T Consensus 743 ~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e--Lk~aa~~ailnAnYla~rL~~~~~---v~~-~~~~~~~~hEfii~~~- 815 (954)
T PRK12566 743 PNNGAVSAAPWGSASILPISWMYIAMMGPQ--LADASEVAILSANYLANQLGGAFP---VLY-RGRNERVAHECILDLR- 815 (954)
T ss_pred CCCCceeecccchHHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHhHhhCC---CCc-CCCCCCeeeEEEEEcc-
Confidence 000111122233333334444444444433 3332 3477788888865311 111 11 111 1 222221
Q ss_pred cCccchhhHHHHHHHHHHHcCcEEe----ecCCEEEEeCCcccCHHHHHHHHHhhhcccccHHHH
Q psy8199 591 EDPEQIETFSKKFFVAALKNELLLR----PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNELDEV 651 (965)
Q Consensus 591 ~~~~~~~~~~~~~~~~l~~~Gi~~~----~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~~e~ 651 (965)
.-..........+.++|.+.|+... |..+.+|++|....+.+++|++++++.....+.++.
T Consensus 816 ~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~v 880 (954)
T PRK12566 816 PLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGKV 880 (954)
T ss_pred ccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0000001113458888889888654 446799999999999999999999998776655443
No 428
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.41 E-value=1.8e-11 Score=137.94 Aligned_cols=263 Identities=12% Similarity=0.065 Sum_probs=157.2
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
++.+.++...+|+++++++.+ .+.+++++||++|+..++.... .++++||+.++.|.++......
T Consensus 59 Y~r~~~pt~~~Le~~lA~l~g--~~~~l~~~sgt~Ai~~~l~al~--------~~GD~Vl~~~~~y~~~~~~~~~----- 123 (394)
T PRK07050 59 YGLHATPTSLALAQRLAEIEG--GRHALLQPSGLAAISLVYFGLV--------KAGDDVLIPDNAYGPNRDHGEW----- 123 (394)
T ss_pred cCCCCCHHHHHHHHHHHHHhC--CCeEEEeccHHHHHHHHHHHHh--------CCCCEEEEecCCcccHHHHHHH-----
Confidence 356788888999999999985 5799999999999999998663 3678999999999765311000
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
........+.+++.. +.+++++++. +++.+|++|. +.|++|... .+++|.+
T Consensus 124 ----~~~~~Gi~v~~vd~~-----------------~~~~l~~~i~---~~tklV~le~-p~Np~~~~~----di~~I~~ 174 (394)
T PRK07050 124 ----LARDFGITVRFYDPL-----------------IGAGIADLIQ---PNTRLIWLEA-PGSVTMEVP----DVPAITA 174 (394)
T ss_pred ----HHHhcCeEEEEECCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCCCCccHh----hHHHHHH
Confidence 000111122333211 2356777764 3567788887 678776544 4999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCC-cccceeeee-cHHHHHhhhccCCcccccccC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG-YLPLSLVMT-TDKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG-~~pig~v~~-~~~i~~~~~~~~~~~~~~~~~ 526 (965)
+|+++|+++|+|++|. .+-. +.-.....|++ +++|.++|| -.+.|++++ ++++++.+.. .....
T Consensus 175 ia~~~gi~livD~a~a-~~~~-----~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~------~~~~~ 242 (394)
T PRK07050 175 AARARGVVTAIDNTYS-AGLA-----FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKL------ARMRL 242 (394)
T ss_pred HHHHcCCEEEEECCcc-cccc-----cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHH------HHHhc
Confidence 9999999999999986 2211 11112234766 578998764 245777776 5677776643 11111
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEeec
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIE 591 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~~~ 591 (965)
+.+.+|..+..++..|+.+.. -+++..++..++.+.|++.. .+|++. ...+-|.++.|++. .
T Consensus 243 G~~~~~~~a~l~lr~l~tl~~--Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~-~ 319 (394)
T PRK07050 243 GIGVSADDCSLVLRGLPSLQV--RLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFD-E 319 (394)
T ss_pred CCCCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEEC-C
Confidence 224456655555443432221 24445555666666665431 123221 12355778888875 2
Q ss_pred CccchhhHHHHHHHHHHHcCcEE
Q psy8199 592 DPEQIETFSKKFFVAALKNELLL 614 (965)
Q Consensus 592 ~~~~~~~~~~~~~~~l~~~Gi~~ 614 (965)
+. ......++.+.|...++-+
T Consensus 320 ~~--~~~~~~~~~~~l~~~~~~~ 340 (394)
T PRK07050 320 RY--SPAQVDAFVEALELFAIGW 340 (394)
T ss_pred CC--CHHHHHHHHHcCCCCeecc
Confidence 10 1122445666666555433
No 429
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.41 E-value=2.1e-11 Score=138.76 Aligned_cols=245 Identities=15% Similarity=0.182 Sum_probs=154.6
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
.+..++...+|+++++++.+ .+.+++++||+.|+.++++.+.. ++++||+....|+|.....
T Consensus 58 ~r~~~p~~~~le~~lA~l~g--~~~al~~~SG~~Ai~~al~all~--------pGd~VIv~~~~y~~t~~~~-------- 119 (427)
T PRK05994 58 TRITNPTNAVLEERVAALEG--GTAALAVASGHAAQFLVFHTLLQ--------PGDEFIAARKLYGGSINQF-------- 119 (427)
T ss_pred ECCCCccHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHhC--------CCCEEEEecCcchhHHHHH--------
Confidence 34556778899999999985 45688999999999999987643 5688999999997752110
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
..........+.+++. .|++++++++. +++++|++|. ++|++|.+.+ +++|.++
T Consensus 120 -~~~~~~~G~~v~~vd~-----------------~d~~~l~~ai~---~~tklV~ves-p~NptG~v~d----l~~I~~l 173 (427)
T PRK05994 120 -GHAFKSFGWQVRWADA-----------------DDPASFERAIT---PRTKAIFIES-IANPGGTVTD----IAAIAEV 173 (427)
T ss_pred -HHHHHhcCcEEEEECC-----------------CCHHHHHHhcC---cCCeEEEEEC-CCCCCCeecC----HHHHHHH
Confidence 0001111122333332 25678888875 3578888898 8999998887 8999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccceeeeec-HH--------------------
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTT-DK-------------------- 508 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pig~v~~~-~~-------------------- 508 (965)
|++||+++|+|++++. +. ...-+...+|+++ ++|.++|-.-++|.++.. ..
T Consensus 174 a~~~gi~livD~a~a~-~~-----~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~ 247 (427)
T PRK05994 174 AHRAGLPLIVDNTLAS-PY-----LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYH 247 (427)
T ss_pred HHHcCCEEEEECCccc-cc-----cCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhh
Confidence 9999999999999862 11 2233345689886 679887622356655542 21
Q ss_pred ---HHHhhh---cc--CCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee
Q psy8199 509 ---IYNSIY---YK--NNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII 575 (965)
Q Consensus 509 ---i~~~~~---~~--~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~ 575 (965)
+.+.+. .. .... .........+|..++.++.-|+.+. ...++-.++..++.+.|++.. .+|++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~A~l~~~~l~tL~--~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~ 324 (427)
T PRK05994 248 GLVLHETFGNFAFAIAARVL-GLRDLGPAISPFNAFLILTGIETLP--LRMQRHSDNALAVAEWLKGHPKVSWVNYAGLP 324 (427)
T ss_pred hhhHHHHhhhhhhHHHHHHH-HHHhcCCCCCHHHHHHHHcCcccHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCC
Confidence 111000 00 0000 0001112356777777777666553 235666777778888776542 234332
Q ss_pred e-----------eeceeEEEEEEEe
Q psy8199 576 N-----------FRQKGMIWAFDVI 589 (965)
Q Consensus 576 ~-----------v~g~G~~~~i~~~ 589 (965)
. ..|-|.+++|++.
T Consensus 325 ~~~~~~~~~~~~~~g~g~~~sf~l~ 349 (427)
T PRK05994 325 DDPYHALAQKYSPKGAGAVFTFGLK 349 (427)
T ss_pred CCccHHHHHHhcCCCceEEEEEEec
Confidence 1 2467889999985
No 430
>KOG2672|consensus
Probab=99.41 E-value=3.3e-12 Score=125.81 Aligned_cols=194 Identities=22% Similarity=0.341 Sum_probs=152.1
Q ss_pred EEEeEeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccC-CCCcccHHHHHHHHH
Q psy8199 679 IELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWR-ELKDRDLDNIENMIC 757 (965)
Q Consensus 679 ~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~-~~~~~~~~~~~~~~~ 757 (965)
..-.+++-. ..-|..+|+||+......+. .+++-|-...++.+++.|...|.|++... ++++...+.|.+.++
T Consensus 109 ~ATATIMlm-GDTCTRGCRFCsVKTsR~Pp-----PlDp~EPeNTAeAIasWgl~YiVlTSVDRDDlpDgGa~HiAkTVq 182 (360)
T KOG2672|consen 109 TATATIMLM-GDTCTRGCRFCSVKTSRNPP-----PLDPNEPENTAEAIASWGLDYIVLTSVDRDDLPDGGANHIAKTVQ 182 (360)
T ss_pred ceeEEEEee-cCccccCcceeeeecCCCCc-----CCCCCCcccHHHHHHHcCCCeEEEEecccccCcCcchHHHHHHHH
Confidence 334456666 89999999999977532222 36666667777778889999999999876 667788999999999
Q ss_pred HHHhcCcEe---EEecCCC-CHHHHHHHHHhCCCeEeccCCCCHHHHhcccC-CCCHHHHHHHHHHHHHc--CCceeeeE
Q psy8199 758 EVKKIGLET---CLTLGML-NENQAYRLKKVGLDYYNHNLDTSPKLYGDIIS-TRDYENRLNTLKNVRNV--GINICCGG 830 (965)
Q Consensus 758 ~i~~~~~~i---~~~~~~~-~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~-~~~~~~~~~~i~~~~~~--Gi~v~~~~ 830 (965)
.||+..+++ ++.+... +.+.++.+...|+|.+.+++||.+++-..++. ..+|.+-+..++.+++. ++-..+.+
T Consensus 183 ~iK~k~p~ilvE~L~pDF~Gd~~~Ve~va~SGLDV~AHNvETVe~Ltp~VRD~RA~yrQSL~VLk~aK~~~P~litktsi 262 (360)
T KOG2672|consen 183 KIKEKAPEILVECLTPDFRGDLKAVEKVAKSGLDVYAHNVETVEELTPFVRDPRANYRQSLSVLKHAKEVKPGLITKTSI 262 (360)
T ss_pred HHHhhCcccchhhcCccccCchHHHHHHHhcCccceecchhhHHhcchhhcCcccchHHhHHHHHHHHhhCCCceehhhh
Confidence 999866555 3333333 77889999999999999999998888888875 45899999999999984 46667889
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHH
Q psy8199 831 IIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPL 880 (965)
Q Consensus 831 i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~ 880 (965)
|.|+|||+|++..+++.+++.+ .+.+.+..|++.-.--+.-..-.+++
T Consensus 263 Mlglgetdeei~~tl~dLr~~~--vdv~t~gqym~ptkrhl~v~eyvtpe 310 (360)
T KOG2672|consen 263 MLGLGETDEEIKQTLKDLRAAD--VDVVTFGQYMQPTKRHLKVKEYVTPE 310 (360)
T ss_pred hhccCCCHHHHHHHHHHHHHcC--CcEEecccccCCccccceeEEeeCHH
Confidence 9999999999999999999999 89999888877544333333333443
No 431
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=99.39 E-value=2.4e-11 Score=131.66 Aligned_cols=214 Identities=14% Similarity=0.138 Sum_probs=156.6
Q ss_pred cCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCC--cccccCCCHHHHHHHHHHHHH---C---C--------------
Q psy8199 674 FDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTE--ITATKILSIESVITAAQKAKS---D---G-------------- 731 (965)
Q Consensus 674 ~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~--~~~~~~~~~eei~~~~~~~~~---~---g-------------- 731 (965)
|+|-.-..|..+..+..+|+++|.||......... ....++.++++|++++..... . |
T Consensus 50 fygi~s~~c~q~~P~~~~C~~rC~fC~r~~~~~~~~~~~~~~~~~peeiv~~~~~~~~~~i~g~~g~~~v~~~~~~ea~~ 129 (322)
T PRK13762 50 FYGIESHRCVQMTPVVAWCNQRCLFCWRPLEEDVGLELKEPEWDDPEEIVEESIKEQRKLLSGYKGNPKVDREKFEEAME 129 (322)
T ss_pred cccccchheeccCchhHHHhccCceeeccCCCCcccccCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCCCHHHhhhccC
Confidence 43544445555665345599999999754322211 223456789999999976532 1 2
Q ss_pred CCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcEeEE-ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccC---C
Q psy8199 732 ATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCL-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIS---T 806 (965)
Q Consensus 732 ~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~i~~-~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~---~ 806 (965)
.+.+.|++++.|+.. .++.++++.+++.++.+.+ ++|.+ ++.++.| +++++.+.+++++ +++.++++++ .
T Consensus 130 ~~~v~iSl~GEPlL~---p~l~eli~~~k~~Gi~~~L~TNG~~-~e~l~~L-~~~~d~i~VSLda~~~e~~~~i~~~~~~ 204 (322)
T PRK13762 130 PKHVAISLSGEPTLY---PYLPELIEEFHKRGFTTFLVTNGTR-PDVLEKL-EEEPTQLYVSLDAPDEETYKKINRPVIP 204 (322)
T ss_pred CCEEEEeCCccccch---hhHHHHHHHHHHcCCCEEEECCCCC-HHHHHHH-HhcCCEEEEEccCCCHHHHHHHhCCCCC
Confidence 346888867777654 4688888888888887765 55654 7888999 7899999999999 8999999976 3
Q ss_pred CCHHHHHHHHHHHHHcCCceeeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCC--CCCCCCCCCHHHHHH
Q psy8199 807 RDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGT--PLYGSSILDPLEFIR 884 (965)
Q Consensus 807 ~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT--~l~~~~~~~~~~~~~ 884 (965)
.+++..++.++.+++.|.++...+.+-.|.+..+..+.++++++++ ++.|.+.+|+|.... .+.....++.+++.+
T Consensus 205 ~~~~~vl~~L~~l~~~~~~~~ir~tlv~g~Nd~e~~~~a~l~~~~~--~~~Iel~~y~~~G~~k~~l~~~~~p~~eev~~ 282 (322)
T PRK13762 205 DAWERILETLELLPSKKTRTVIRITLVKGYNMHDPEGFAKLIERAN--PDFVEVKAYMHVGYSRNRLTRDNMPSHEEVRE 282 (322)
T ss_pred CcHHHHHHHHHHHHhCCCCEEEEEEEECCcCccHHHHHHHHHHHcC--CCEEEEECCeECCCccccccccCCcCHHHHHH
Confidence 5899999999999999987766555544555555558888999998 899999889887554 233445678899999
Q ss_pred HHHHHHHHCC
Q psy8199 885 TIAVARITMP 894 (965)
Q Consensus 885 ~ia~~R~~lp 894 (965)
+...++....
T Consensus 283 ~~~~l~~~~~ 292 (322)
T PRK13762 283 FAKELAEYTG 292 (322)
T ss_pred HHHHHHHhcC
Confidence 9888877654
No 432
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.39 E-value=9.8e-11 Score=142.29 Aligned_cols=312 Identities=13% Similarity=0.129 Sum_probs=194.5
Q ss_pred cHHHHHHHHHHHhhcCCCCCeEEEcCChh----HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 296 HKPVIKLSEKLSSLTQYKLGHCFYGSDGA----SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 296 ~~~~~~la~~l~~~~~~~~~~v~~~~sGs----eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
.+...++.+.|+++++ .+.|.|+++++ +|+..+++.. ++.+|...|+ +++...+-||+........|
T Consensus 567 ~~~~~~~r~~la~i~g--~~~v~f~pnaga~ge~a~~~vi~~~---~~~~Gd~~r~-~vli~~~aH~sn~a~a~~~G--- 637 (993)
T PLN02414 567 QEMFEDLGDLLCEITG--FDSFSLQPNAGAAGEYAGLMVIRAY---HLSRGDHHRN-VCIIPVSAHGTNPASAAMCG--- 637 (993)
T ss_pred HHHHHHHHHHHHHHhC--CCeEEEcCCCcHHHHHHHHHHHHHH---HhccCCCCCC-EEEeCCCcCccCHHHHHHCC---
Confidence 4455789999999994 69999998887 6776666655 4444544444 45555688998554433322
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
..++.+|.... +. .|+++|+++++++.+++++|++.- +++.+|...+ +++|.++
T Consensus 638 ---------~~vv~v~~d~~-G~-----------vDle~L~~~i~~~~~~ta~V~vt~-pSn~gg~e~~----I~eI~~i 691 (993)
T PLN02414 638 ---------MKIVVVGTDAK-GN-----------INIEELRKAAEAHKDNLAALMVTY-PSTHGVYEEG----IDEICDI 691 (993)
T ss_pred ---------CEEEEeccCCC-CC-----------cCHHHHHHHHhccCCCeEEEEEEC-CCccccccch----HHHHHHH
Confidence 24455554321 11 489999999986556788888876 6778887777 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceeee--ccccC----CCcccceeeeecHHHHHhhhccC--Ccccc-
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGIT----GGYLPLSLVMTTDKIYNSIYYKN--NINIF- 522 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~--sK~l~----gG~~pig~v~~~~~i~~~~~~~~--~~~~~- 522 (965)
|+++|+++++|-++. .+..+ ...-..+..|++++ .|.++ +|+-.+|.+.+++++...+-... ....+
T Consensus 692 ah~~Galv~vDgAq~-~a~~~---l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~ 767 (993)
T PLN02414 692 IHDNGGQVYMDGANM-NAQVG---LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIP 767 (993)
T ss_pred HHHcCCEEEEEecCH-HhccC---cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcc
Confidence 999999999999985 22111 11112334799887 47554 34346888988888776654210 00000
Q ss_pred ---cc--cCCCC----CCHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHcccCCCceeeeeceeE-E--EEEE
Q psy8199 523 ---LH--SHSYS----GNPLACCAALATLEIFNKDNI---LQRISQDMKKITKALTSLITHPKIINFRQKGM-I--WAFD 587 (965)
Q Consensus 523 ---~~--~~t~~----~~~~~~aaa~a~L~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~-~--~~i~ 587 (965)
.. .+|.. |+.+.+.++..-+..+-.+++ .++...+..++.++|.+.. .+......|. + +.+.
T Consensus 768 ~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~---~~~~~~~~~~~~hEfv~~ 844 (993)
T PLN02414 768 RPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHY---PVLFRGKNGTCAHEFIID 844 (993)
T ss_pred cccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhC---CccccCCCCCeeeeEEEe
Confidence 00 12322 444455555555665555555 6667778889999887632 1111111222 1 1112
Q ss_pred EeecCccchhhHHHHHHHHHHHcCcEEe----ecCCEEEEeCCcccCHHHHHHHHHhhhcccccHHH
Q psy8199 588 VIIEDPEQIETFSKKFFVAALKNELLLR----PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNELDE 650 (965)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~~e 650 (965)
+. .-+......+..+.++|.+.|+... |..+.+|++|.-..+.+++|++++++.....+..+
T Consensus 845 ~~-~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 845 LR-PFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred cc-ccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 11 0000001113568888999998764 44578999999999999999999999776655443
No 433
>PRK02769 histidine decarboxylase; Provisional
Probab=99.38 E-value=1.6e-10 Score=128.99 Aligned_cols=290 Identities=14% Similarity=0.125 Sum_probs=178.8
Q ss_pred CcHHHHHHHHHHHhhcCCCCCe--EEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCc
Q psy8199 295 THKPVIKLSEKLSSLTQYKLGH--CFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 372 (965)
Q Consensus 295 ~~~~~~~la~~l~~~~~~~~~~--v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 372 (965)
..+...+..+.++++++...+. .+||+||||||..|+..+|.+. +++.|++ ...-|.+..-+....+
T Consensus 63 ~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~------~~~~ii~-s~~~H~Sv~ka~~~lg---- 131 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELF------PDGTLYY-SKDTHYSVSKIARLLR---- 131 (380)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhC------CCcEEEe-CCCceehHHHHHHHcC----
Confidence 3445567788888988754444 4899999999999999998752 2344444 4455655433322222
Q ss_pred cchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy8199 373 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 452 (965)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~ 452 (965)
.+...+|... .+. .|+++|++++.+.+..+.+|++.- +++++|.+.| +++|.++|
T Consensus 132 --------~~~~~V~~~~-~g~-----------id~~~L~~~i~~~~~~t~lvv~t~-gtt~tG~idp----i~~I~~i~ 186 (380)
T PRK02769 132 --------IKSRVITSLP-NGE-----------IDYDDLISKIKENKNQPPIIFANI-GTTMTGAIDN----IKEIQEIL 186 (380)
T ss_pred --------CCCceeccCC-CCc-----------CcHHHHHHHHHhCCCCcEEEEEEe-CCCCCcccCC----HHHHHHHH
Confidence 1222333321 111 378999999976544566777776 7899999998 99999999
Q ss_pred HhcC---CeEEEeccccCCCcccc-----cccccccCCCcceeeeccc-cCCCcccceeeeecHHHHHhhhccCCccccc
Q psy8199 453 NNYN---IHLIADEIAVGCGRTGK-----FFACEHAEIWPDFLCLSKG-ITGGYLPLSLVMTTDKIYNSIYYKNNINIFL 523 (965)
Q Consensus 453 ~~~g---~llI~DEv~tg~gr~G~-----~~~~~~~~~~pDivt~sK~-l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~ 523 (965)
++|| +++++|-+|.|+ ..-. .+.+. . ..|.+++|-. +.|+..+.|+++.+++..+.+...... ...
T Consensus 187 ~~~g~~~~~lHVDaA~gg~-~~p~~~~~~~~d~~--~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~y-l~~ 261 (380)
T PRK02769 187 KKIGIDDYYIHADAALSGM-ILPFVNNPPPFSFA--D-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDY-IGS 261 (380)
T ss_pred HHhCCCceEEEEEecccce-eecccCccccCCcc--C-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccc-cCC
Confidence 9998 699999999764 2210 11111 2 5799998742 334347889999998776655321000 000
Q ss_pred ccCCCCCC--HHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHcccCCCceeee-eceeEEEEEEEeecCccchh
Q psy8199 524 HSHSYSGN--PLACCAALATLEIFNKDN---ILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIE 597 (965)
Q Consensus 524 ~~~t~~~~--~~~~aaa~a~L~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~i~~v-~g~G~~~~i~~~~~~~~~~~ 597 (965)
...|+.|. ..+.++..++|+.+..++ ..++..++.+++.++|++. ++..+ .+..+.+.|... .
T Consensus 262 ~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~----g~~~~~~p~~~~v~f~~~------~- 330 (380)
T PRK02769 262 RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN----GIPAWRNPNSITVVFPCP------S- 330 (380)
T ss_pred CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC----CCEEEcCCCceEEEEcCC------C-
Confidence 11233333 345666677777765543 4566777888888888653 33322 233333333221 1
Q ss_pred hHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 598 TFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 598 ~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
..+ .+|..+.+.++.+|+.....++.+.++++++.+...
T Consensus 331 ---~~~-----~~~w~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~ 369 (380)
T PRK02769 331 ---ERI-----WKKWHLATSGNQAHIITMPHHNKQQIDSLIDELIFD 369 (380)
T ss_pred ---HHH-----HhCeeEcccCCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 112 156666665667777766778888899888777653
No 434
>PLN03032 serine decarboxylase; Provisional
Probab=99.38 E-value=1.6e-10 Score=127.68 Aligned_cols=313 Identities=12% Similarity=0.055 Sum_probs=187.7
Q ss_pred CHHHHHHHHHHHhh-ccc-cccCC---CCcHHHHHHHHHHHhhcCCCCCeE--EEcCChhHHHHHHHHHHHHHHHhcCCC
Q psy8199 272 NSYINKALKNQLNK-LEH-VMLSN---LTHKPVIKLSEKLSSLTQYKLGHC--FYGSDGASAVEVALKMSFHYWYNKGFL 344 (965)
Q Consensus 272 ~p~v~~av~~~~~~-~~~-~~~~~---~~~~~~~~la~~l~~~~~~~~~~v--~~~~sGseA~~~Al~~a~~~~~~~g~~ 344 (965)
++.+++++.+.+.+ .+. ..... ...+...++.+.++++++.+.+.+ +||+||||||..|+..+|.+.
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~------ 109 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVF------ 109 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhC------
Confidence 34456666666543 211 11111 234556778888999997666665 999999999999999998752
Q ss_pred CceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEE
Q psy8199 345 NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA 424 (965)
Q Consensus 345 ~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aa 424 (965)
++ .+++....-|-+..-+....+ .+...+|.... +. -|+++|+++|++....+.+
T Consensus 110 ~~-~~vi~s~~~H~Sv~kaa~~lg------------~~~~~V~~d~~-g~-----------id~~~L~~~i~~~~~~~~l 164 (374)
T PLN03032 110 PD-GILYASRESHYSVFKAARMYR------------MEAVKVPTLPS-GE-----------IDYDDLERALAKNRDKPAI 164 (374)
T ss_pred CC-cEEEeCCCceeHHHHHHHHcC------------CCCeEeeeCCC-Cc-----------CcHHHHHHHHHHcCCCCEE
Confidence 22 255666666766443333222 12334554321 11 4889999999764334566
Q ss_pred EEEccccccCCCcccCChHHHHHHHHHHHhcC-----CeEEEeccccCCCccc-----ccccccccCCCcceeeeccccC
Q psy8199 425 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYN-----IHLIADEIAVGCGRTG-----KFFACEHAEIWPDFLCLSKGIT 494 (965)
Q Consensus 425 ii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g-----~llI~DEv~tg~gr~G-----~~~~~~~~~~~pDivt~sK~l~ 494 (965)
|++.- .++++|.+.| +++|.++|++|| +++++|-+|.|+ ..- ..+.+ ....|.++++-.-.
T Consensus 165 vv~ta-gtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~-~~p~~~~~~~~~~---~~~vDSis~s~HK~ 235 (374)
T PLN03032 165 LNVNI-GTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALFGL-MMPFVSRAPEVTF---RKPIGSVSVSGHKF 235 (374)
T ss_pred EEEEe-cCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccchhh-hhhccCCCcccCC---CcCCcEEEECcccc
Confidence 66665 6889999998 999999999997 489999999753 211 00111 12478899885433
Q ss_pred CC-cccceeeeecHHHHHhhhccCCcccccccCCCCCC--HHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHcc
Q psy8199 495 GG-YLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGN--PLACCAALATLEIFNKDN---ILQRISQDMKKITKALTSL 568 (965)
Q Consensus 495 gG-~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~L~~~~~~~---~~~~~~~~~~~l~~~L~~l 568 (965)
+| ..++|+++.+++..+.+...... -.....|..|+ ....++..++|+.+..++ ..++..++.+++.+.|++.
T Consensus 236 ~g~P~g~G~ll~r~~~~~~~~~~~~Y-l~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 236 LGCPMPCGVALTRKKHVKALSQNVEY-LNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred cCCCcCeEEEEEEchhhHhhccCCcc-cCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 47888999988777655331000 00011234443 244556667777665554 4566667788888888764
Q ss_pred cCCCcee-eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 569 ITHPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 569 ~~~~~i~-~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
++. ...+..+.+.|... . .. . ..+|..+.+.++.+++.....++.+.++++++.+.+
T Consensus 315 ----~~~~~~~p~~~~V~f~~~--~-------~~----~-~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 315 ----GLTCRLNELSSTVVFERP--M-------DE----A-FIKKWQLACEGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ----CCcEEECCCceEEEEcCC--C-------cH----h-HhheeeecccCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 222 22233333333211 0 11 1 225655555555666665556778899999887654
No 435
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.38 E-value=1.4e-10 Score=130.82 Aligned_cols=280 Identities=13% Similarity=0.064 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEE
Q psy8199 273 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 352 (965)
Q Consensus 273 p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~ 352 (965)
++-.+++.+.+..... ....+...++++.+++.+ +.+++++++||++|+..++.++.- .++++||+.
T Consensus 11 ~~~~~~~~~~l~~~~~----~g~~~~~~~~e~~la~~~--g~~~~v~~~sgt~al~~~l~~~~~-------~~Gd~Viv~ 77 (375)
T PRK11706 11 GTELDYIQQAMSSGKL----CGDGGFTRRCQQWLEQRF--GSAKVLLTPSCTAALEMAALLLDI-------QPGDEVIMP 77 (375)
T ss_pred HHHHHHHHHHHHcCCc----cCCCHHHHHHHHHHHHHh--CCCeEEEECCHHHHHHHHHHHhCC-------CCCCEEEEC
Confidence 3446677777665421 123466788889899988 468999999999999988775421 356889999
Q ss_pred cCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccc
Q psy8199 353 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQ 432 (965)
Q Consensus 353 ~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~ 432 (965)
..+|.+........+. ..++++....... .|++++++++.+ ++.+|++ +
T Consensus 78 ~~t~~~~~~~~~~~G~-------------~~v~~d~d~~~~~-----------~d~~~le~~i~~---~tk~i~~---~- 126 (375)
T PRK11706 78 SYTFVSTANAFVLRGA-------------KIVFVDIRPDTMN-----------IDETLIEAAITP---KTRAIVP---V- 126 (375)
T ss_pred CCCcHHHHHHHHHcCC-------------EEEEEecCCCcCC-----------cCHHHHHHhcCC---CCeEEEE---e-
Confidence 9888776433322221 2233333211111 367888888853 4555554 2
Q ss_pred cCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcc--cccccccccCCCcceeeec----cccCCCcccceeeeec
Q psy8199 433 CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT--GKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTT 506 (965)
Q Consensus 433 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~--G~~~~~~~~~~~pDivt~s----K~l~gG~~pig~v~~~ 506 (965)
+.+|...+ +++|.++|++||+++|.|++|+ +|.. |.. .|---|+.+|| |.++.| ...+.+..+
T Consensus 127 ~~~G~~~~----~~~i~~la~~~~i~vIeD~a~a-~g~~~~~~~-----~g~~~~~~~~Sf~~~K~l~~g-~gG~~~~~~ 195 (375)
T PRK11706 127 HYAGVACE----MDTIMALAKKHNLFVVEDAAQG-VMSTYKGRA-----LGTIGHIGCFSFHETKNYTAG-EGGALLIND 195 (375)
T ss_pred CCCCCccC----HHHHHHHHHHcCCEEEEECccc-cccccCCee-----eecCcCEEEEeCCCCcccccc-CCeEEEECC
Confidence 34676554 7899999999999999999997 4431 221 12223778888 988655 233445556
Q ss_pred HHHHHhhhc---cCCcc-c-----------ccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCC
Q psy8199 507 DKIYNSIYY---KNNIN-I-----------FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITH 571 (965)
Q Consensus 507 ~~i~~~~~~---~~~~~-~-----------~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~ 571 (965)
+++++.+.. .+... . ...+.++..+.+.++.+++-|+.++ ...++-+++.+++.+.|..+...
T Consensus 196 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~--~~~~~R~~~~~~~~~~L~~~~~~ 273 (375)
T PRK11706 196 PALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAAD--RINQRRLALWQRYYDALAPLAEA 273 (375)
T ss_pred HHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCcC
Confidence 777654332 11000 0 0123344445677777777776653 34566677777777877665321
Q ss_pred Ccee--eee----ceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEe
Q psy8199 572 PKII--NFR----QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR 615 (965)
Q Consensus 572 ~~i~--~v~----g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 615 (965)
+.+. ... ....++.+.+. +. ...+++.+.|.++||.++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~r~~l~~~L~~~gI~~~ 317 (375)
T PRK11706 274 GRIELPSIPDDCKHNAHMFYIKLR--DL----EDRSALINFLKEAGIMAV 317 (375)
T ss_pred CeeecCCCCCCCceeeEEEEEEEC--Cc----CCHHHHHHHHHHCCCCcc
Confidence 1121 111 12223444332 11 124578889999999865
No 436
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.38 E-value=2.2e-11 Score=135.99 Aligned_cols=239 Identities=13% Similarity=0.125 Sum_probs=151.4
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCc
Q psy8199 293 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 372 (965)
Q Consensus 293 ~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 372 (965)
...++....|+++++++.+ .+.+++++||++|+..++.... .++++||+.++.|.+.......
T Consensus 57 r~~npt~~~Le~~iA~le~--~~~~~~~~sG~~Ai~~~l~all--------~~GD~Vvv~~~~Y~~t~~l~~~------- 119 (394)
T PRK09028 57 RRGTPTHFAFQAAIVELEG--GAGTALYPSGAAAISNALLSFL--------KAGDHLLMVDSCYEPTRDLCDK------- 119 (394)
T ss_pred CCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHH-------
Confidence 3345566789999998874 3578899999999999987653 3678999999998665321100
Q ss_pred cchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy8199 373 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 452 (965)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~ 452 (965)
........+.+++. .+.+++++++. +++.+|++|. +.|++|.+.+ +++|.++|
T Consensus 120 --~l~~~Gi~v~~v~~-----------------~~~e~l~~~l~---~~TklV~les-psNPtg~v~d----l~~I~~la 172 (394)
T PRK09028 120 --ILKGFGIETTYYDP-----------------MIGEGIRELIR---PNTKVLFLES-PGSITMEVQD----VPTLSRIA 172 (394)
T ss_pred --hhhhcceEEEEECC-----------------CCHHHHHHhcC---cCceEEEEEC-CCCCCCcHHH----HHHHHHHH
Confidence 00011112223221 13466777764 4578999998 8999887765 99999999
Q ss_pred HhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCC-cccceeeeecHHHHHhhhccCCcccccccCCCC
Q psy8199 453 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG-YLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 529 (965)
Q Consensus 453 ~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG-~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~ 529 (965)
+++|+++|+|++|.. + ..+.-+....|+++ ..|.++|. -.-.|+++.++++++.+... . ...| ..
T Consensus 173 ~~~g~~lvvD~t~a~----p--~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~---~-~~~G--~~ 240 (394)
T PRK09028 173 HEHDIVVMLDNTWAS----P--INSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREH---S-YLMG--QC 240 (394)
T ss_pred HHcCCEEEEECCccc----c--ccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHH---H-HhcC--CC
Confidence 999999999999962 1 11222344578885 56988762 23356666677766655430 0 0112 23
Q ss_pred CCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 530 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 530 ~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
.+|..+...+..|+.+.- ..++-.++...+.+.|++-. .+|++. ...|-|.|++|++.
T Consensus 241 ~~p~~a~l~~rgl~TL~l--R~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 241 TSPDDVYLAMRGLRTLGV--RLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred CCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 567777777666655432 24555666666777776432 133322 12366889999985
No 437
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.37 E-value=4e-11 Score=134.68 Aligned_cols=261 Identities=15% Similarity=0.183 Sum_probs=158.0
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCc
Q psy8199 293 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 372 (965)
Q Consensus 293 ~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 372 (965)
....+...+|+++++++.+ .+.+++++||+.|+..++.+. .++++||+.+..|++.... +
T Consensus 43 r~~~p~~~~le~~la~l~g--~~~~l~~~sG~~al~~~l~ll---------~~Gd~Vl~~~~~y~~~~~~-~-------- 102 (378)
T TIGR01329 43 RSGNPTRTALESLLAKLDK--ADRAFAFSSGMAALDVITRLL---------NNGDEIIAGDDLYGGTDRL-L-------- 102 (378)
T ss_pred CCCChHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHh---------CCCCEEEEcCCCchHHHHH-H--------
Confidence 3456678899999999985 377888899999988766532 3567899888887654211 0
Q ss_pred cchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy8199 373 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 452 (965)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~ 452 (965)
..........+.+++. .|+++++++++ +++.+|++|. +.|++|.+.+ +++|.++|
T Consensus 103 ~~~~~~~G~~v~~vd~-----------------~d~~~le~~i~---~~tklv~le~-psnptg~v~d----l~~I~~la 157 (378)
T TIGR01329 103 TQVVPRSGVVVVHVDT-----------------TDLDKVKAALG---PKTKLVLLES-PTNPLQKIVD----IRKISEMA 157 (378)
T ss_pred HHHHHHcCcEEEEeCC-----------------CCHHHHHHhcC---cCceEEEEEC-CCCCCCeeec----HHHHHHHH
Confidence 0000111122334432 25678888875 4578888888 7999998887 99999999
Q ss_pred HhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCC-cccceeeeec-HHHHHhhhccCCcccccccCCC
Q psy8199 453 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG-YLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSY 528 (965)
Q Consensus 453 ~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG-~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~t~ 528 (965)
++||+++|+|+++. .+.... ..+...|+++ .+|.++|+ ....|+++++ +++.+.+.. .......
T Consensus 158 ~~~g~~vivD~a~~-~~~~~~-----~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~------~~~~~G~ 225 (378)
T TIGR01329 158 HAQNALVVVDNTMM-SPLLCN-----PLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYF------LQNSTGS 225 (378)
T ss_pred HHcCCEEEEECCCc-ccccCC-----hhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHH------HHHhcCC
Confidence 99999999999974 221111 1123468875 57988763 1346777674 455454433 1111123
Q ss_pred CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee----------eeceeEEEEEEEeecCc
Q psy8199 529 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN----------FRQKGMIWAFDVIIEDP 593 (965)
Q Consensus 529 ~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~----------v~g~G~~~~i~~~~~~~ 593 (965)
..+|..++.++..|+.+. ...++-.++...+.+.|++.. .+|++.. ..+.|.+++|++. +
T Consensus 226 ~~~~~~a~l~~~~l~tl~--~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~--~- 300 (378)
T TIGR01329 226 GLAPFDCWLLLRGIKTLA--IRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG--S- 300 (378)
T ss_pred cCCHHHHHHHHccCCCHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC--C-
Confidence 346666655544444332 234555556666666665321 1232211 2356789999884 2
Q ss_pred cchhhHHHHHHHHHHHcCcEEeecC
Q psy8199 594 EQIETFSKKFFVAALKNELLLRPIG 618 (965)
Q Consensus 594 ~~~~~~~~~~~~~l~~~Gi~~~~~~ 618 (965)
...+.+|.+.|...++.++.++
T Consensus 301 ---~~~~~~~~~~L~~~~i~~s~G~ 322 (378)
T TIGR01329 301 ---VALSKRLVEATKLFSITVSFGS 322 (378)
T ss_pred ---HHHHHHHHHhCcCcccccCCCC
Confidence 2224467777766666665554
No 438
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.37 E-value=7.2e-11 Score=133.21 Aligned_cols=239 Identities=13% Similarity=0.135 Sum_probs=146.0
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
.+...+...+++++++++.+. +..+.++||+.|+..++... .++++||+.++.|++.......
T Consensus 49 ~r~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~ai~~~l~~l---------~~Gd~Vlv~~~~y~~~~~~~~~------ 111 (390)
T PRK08064 49 SRSGNPTREALEDIIAELEGG--TKGFAFASGMAAISTAFLLL---------SKGDHVLISEDVYGGTYRMITE------ 111 (390)
T ss_pred cCCCChhHHHHHHHHHHHhCC--CCeEEECCHHHHHHHHHHHh---------CCCCEEEEccCccchHHHHHHH------
Confidence 455677888999999999863 34666788999998888522 2567899999988764211100
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
........+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.++
T Consensus 112 ---~~~~~G~~v~~v~~-----------------~d~~~l~~~l~---~~tklV~l~~-p~NptG~~~d----l~~I~~l 163 (390)
T PRK08064 112 ---VLSRFGIEHTFVDM-----------------TNLEEVAQNIK---PNTKLFYVET-PSNPLLKVTD----IRGVVKL 163 (390)
T ss_pred ---HHHHcCCEEEEECC-----------------CCHHHHHHhcC---CCceEEEEEC-CCCCCcEecc----HHHHHHH
Confidence 00111123444443 25677877774 3567888887 7999998886 8999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCc-ccceeeee-cHHHHHhhhccCCcccccccCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGY-LPLSLVMT-TDKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~-~pig~v~~-~~~i~~~~~~~~~~~~~~~~~t 527 (965)
|+++|+++|+||+|..+ .... . .....|+++ ++|.++|.. .-.|++++ ++++++.+.. +.....
T Consensus 164 a~~~g~~vvvD~a~~~~-~~~~--~---~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~------~~~~~g 231 (390)
T PRK08064 164 AKAIGCLTFVDNTFLTP-LLQK--P---LDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYF------LQNSFG 231 (390)
T ss_pred HHHcCCEEEEECCCCcc-cccC--c---hhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHH------HHHhcC
Confidence 99999999999998632 1111 1 122357775 579886521 12355555 4677776654 222223
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
...+|..+..++..++.+. ...++..++...+.+.|++.. .+|++. ...+.|.+++|++.
T Consensus 232 ~~~~~~~a~l~~~gl~tl~--~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (390)
T PRK08064 232 AVLGVQDCWLVLRGLKTLH--VRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ 306 (390)
T ss_pred CCCCHHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC
Confidence 3345555555444444322 124444555556666665432 123221 23467889999985
No 439
>COG1031 Uncharacterized Fe-S oxidoreductase [Energy production and conversion]
Probab=99.36 E-value=2.6e-11 Score=128.25 Aligned_cols=204 Identities=16% Similarity=0.260 Sum_probs=150.6
Q ss_pred HHHHHHHHHhcCCCeEEEeEeEeeccCCCCCC----CCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEee
Q psy8199 664 FRAQKVHRKYFDANEIELAVLLSIKTGGCTED----CGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGA 739 (965)
Q Consensus 664 ~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~----C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~ 739 (965)
-..+.+.++|-....+.+ .-|+. .++|+.. |+||.-+.. +. -..+++|.|+++++.+.+.|+++|.+.-
T Consensus 167 ~~GA~vv~qHP~yp~~vi-~EiET-yRGC~r~~~ggCSFCtEp~~-g~----~~~R~~e~Vv~EVkaLY~~GvrhFRlGR 239 (560)
T COG1031 167 PLGAEVVKQHPNYPEYVI-CEIET-YRGCPRRVSGGCSFCTEPVR-GR----PEFRPPEDVVEEVKALYRAGVRHFRLGR 239 (560)
T ss_pred hccchHHHhCCCCcceEE-EEEee-ccCCcccccCCCccccCcCc-CC----cccCCHHHHHHHHHHHHHhccceeeecc
Confidence 345567677653333443 44555 8999976 999987753 21 1247899999999999999999987642
Q ss_pred -------ccC----CCCcccHHHHHHHHHHHHhcCcEeEE------ecCCC------CHHHHHHHHHhCC--CeEeccCC
Q psy8199 740 -------AWR----ELKDRDLDNIENMICEVKKIGLETCL------TLGML------NENQAYRLKKVGL--DYYNHNLD 794 (965)
Q Consensus 740 -------g~~----~~~~~~~~~~~~~~~~i~~~~~~i~~------~~~~~------~~e~l~~Lk~aG~--~~i~i~~e 794 (965)
+.. +.+....+.+.++++.+++.-+.+.+ |+..+ +++.++.+.+.|- +...+|+|
T Consensus 240 Q~difsy~~~~~g~e~P~PnPealekL~~Gir~~AP~l~tLHiDNaNP~tIa~yp~eSr~i~K~ivky~TpGnVaAfGlE 319 (560)
T COG1031 240 QADIFSYGADDNGGEVPRPNPEALEKLFRGIRNVAPNLKTLHIDNANPATIARYPEESREIAKVIVKYGTPGNVAAFGLE 319 (560)
T ss_pred ccceeeecccccCCCCCCCCHHHHHHHHHHHHhhCCCCeeeeecCCCchhhhcChHHHHHHHHHHHhhCCCCceeeeecc
Confidence 111 12344578899999999874433311 33332 6677788888773 77899999
Q ss_pred C-CHHHHhcccCCCCHHHHHHHHHHHHHcC-------C---ceeeeEEEec-CCCHHHHHHHHHHHHhcCC---CCCcee
Q psy8199 795 T-SPKLYGDIISTRDYENRLNTLKNVRNVG-------I---NICCGGIIGL-SESRDQRAELIFQLANLNP---YPESVP 859 (965)
Q Consensus 795 s-~~~~~~~i~~~~~~~~~~~~i~~~~~~G-------i---~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~---~~~~i~ 859 (965)
| +|.+.++-+-..+.|+.++|++...+.| + --+.++++|| |||.|...-..++|+++=+ ....|.
T Consensus 320 saDp~V~r~NnL~~spEEvl~AV~ivn~vG~~rg~nGlP~lLPGINfv~GL~GEtkeT~~ln~efL~~ild~gllvRRIN 399 (560)
T COG1031 320 SADPRVARKNNLNASPEEVLEAVEIVNEVGGGRGYNGLPYLLPGINFVFGLPGETKETYELNYEFLKEILDEGLLVRRIN 399 (560)
T ss_pred ccCHHHHhhccccCCHHHHHHHHHHHHHhcCccCcCCCccccccceeEecCCCccHHHHHhhHHHHHHHHhcCceEEEee
Confidence 9 8999888887889999999999999865 3 3468899999 8999999988888888532 356788
Q ss_pred eccccccCCCCCCCC
Q psy8199 860 INNLVQIKGTPLYGS 874 (965)
Q Consensus 860 ~~~~~P~~gT~l~~~ 874 (965)
+-..+++|||||+..
T Consensus 400 IRqV~~fpgT~~~~~ 414 (560)
T COG1031 400 IRQVVVFPGTPMWER 414 (560)
T ss_pred eeeEeecCCCchhhh
Confidence 888899999999865
No 440
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.36 E-value=3.1e-10 Score=128.55 Aligned_cols=285 Identities=13% Similarity=0.050 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEE
Q psy8199 273 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 352 (965)
Q Consensus 273 p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~ 352 (965)
++-.+++.+.+.... + ...+...++.+.++++++ .++.++++||++|+..+++.+.- .++++|++.
T Consensus 10 ~~~~~~v~~~~~~~~-~----~~g~~~~~le~~la~~~g--~~~~v~~~sgt~al~~~l~al~~-------~~Gd~Viv~ 75 (380)
T TIGR03588 10 QDDIDAVVEVLKSDF-L----TQGPTVPAFEEALAEYVG--AKYAVAFNSATSALHIACLALGV-------GPGDRVWTT 75 (380)
T ss_pred HHHHHHHHHHHhcCC-c----cCChhHHHHHHHHHHHHC--CCeEEEEcCHHHHHHHHHHHcCC-------CCCCEEEeC
Confidence 455777877776532 1 124556788999999985 45677788999999999986521 356889999
Q ss_pred cCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC-CCcEEEEEEcccc
Q psy8199 353 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLV 431 (965)
Q Consensus 353 ~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~aaii~ep~v 431 (965)
.++|++........+ ...++++....... .|++++++.+.+. .+++.+|++
T Consensus 76 ~~~~~~~~~~~~~~G-------------~~~~~~~~~~~~~~-----------~d~~~l~~~i~~~~~~~t~~v~~---- 127 (380)
T TIGR03588 76 PITFVATANCALYCG-------------AKVDFVDIDPDTGN-----------IDEDALEKKLAAAKGKLPKAIVP---- 127 (380)
T ss_pred CcchHHHHHHHHHcC-------------CEEEEEecCCCcCC-----------cCHHHHHHHhhcccCCCceEEEE----
Confidence 988876632221111 12334443111111 3778888888632 124555553
Q ss_pred ccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC--Ccceeeec----cccCCCcccceeeee
Q psy8199 432 QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI--WPDFLCLS----KGITGGYLPLSLVMT 505 (965)
Q Consensus 432 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~--~pDivt~s----K~l~gG~~pig~v~~ 505 (965)
.+..|...+ +++|.++|++||+++|.|++|+ +|-. +.....|. .-|+.++| |.++.| ..|+++.
T Consensus 128 ~~~~G~~~~----~~~i~~l~~~~~~~lI~D~a~a-~g~~---~~~~~~g~~~~~d~~~~S~~~~K~~~~~--~GG~v~~ 197 (380)
T TIGR03588 128 VDFAGKSVD----MQAIAALAKKHGLKIIEDASHA-LGAE---YGGKPVGNCRYADATVFSFHPVKIITTA--EGGAVTT 197 (380)
T ss_pred eCCCCccCC----HHHHHHHHHHcCCEEEEECCCc-ccCc---cCCEeCCCccccceEEEecCCCCccccc--CceEEEE
Confidence 233576555 8999999999999999999997 4321 11112232 34888876 777654 3455665
Q ss_pred c-HHHHHhhhc---cCCcc-c---------------ccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Q psy8199 506 T-DKIYNSIYY---KNNIN-I---------------FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 565 (965)
Q Consensus 506 ~-~~i~~~~~~---~~~~~-~---------------~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L 565 (965)
+ +++.+.+.. .+... . ...+..+..+.+.++.+++.|+.+ +...++-+++.+++.+.|
T Consensus 198 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L 275 (380)
T TIGR03588 198 NDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLL 275 (380)
T ss_pred CCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHh
Confidence 3 556554432 11000 0 001222334566667777777655 346677788888888888
Q ss_pred HcccCCCceeeeec-ee--EEEEEEEeecCccchhhHHHHHHHHHHHcCcEEe
Q psy8199 566 TSLITHPKIINFRQ-KG--MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR 615 (965)
Q Consensus 566 ~~l~~~~~i~~v~g-~G--~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 615 (965)
..+..........+ .. .++.+.+...+ ....+.+.+.|.++||.++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~r~~l~~~L~~~gI~~~ 324 (380)
T TIGR03588 276 KDLPYFTPLTIPLGSKSAWHLYPILLDQEF----GCTRKEVFEALRAAGIGVQ 324 (380)
T ss_pred cCCCCccCCCCCCCCEeEEEEEEEEECCcC----CCCHHHHHHHHHHCCCCcc
Confidence 76521110111111 11 22223232001 1124567888899999765
No 441
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.36 E-value=4.9e-11 Score=132.81 Aligned_cols=241 Identities=12% Similarity=0.068 Sum_probs=150.5
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
+++..++....|+++++.+-+ .+..++++||++|+..++.... .++++||+.++.|.++......
T Consensus 58 YsR~gnPt~~~Le~~la~le~--~~~~v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~----- 122 (395)
T PRK05967 58 YGTRGTPTTDALCKAIDALEG--SAGTILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDT----- 122 (395)
T ss_pred cCCCCChHHHHHHHHHHHHhC--CCCEEEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHH-----
Confidence 346678888999999998764 3455677779999999987653 3678999999999876321100
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
........+.+++. .+.++++++++ +++.+|++|. +.|+.+.+.+ +++|.+
T Consensus 123 ----~l~~~Gi~v~~vd~-----------------~~~e~l~~al~---~~TklV~les-PsNP~l~v~d----l~~I~~ 173 (395)
T PRK05967 123 ----MLKRLGVEVEYYDP-----------------EIGAGIAKLMR---PNTKVVHTEA-PGSNTFEMQD----IPAIAE 173 (395)
T ss_pred ----HHHhcCeEEEEeCC-----------------CCHHHHHHhcC---cCceEEEEEC-CCCCCCcHHH----HHHHHH
Confidence 01111123333322 12356777775 4578899997 6888776665 999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCC-CcccceeeeecHHHHHhhhccCCcccccccCC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~g-G~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t 527 (965)
+|+++|+++|+|+++... ..+.-.....|+++ .+|.++| |-.-.|+++++++.++.+... . ...|
T Consensus 174 la~~~g~~vvVD~t~a~p------~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~---~-~~~G-- 241 (395)
T PRK05967 174 AAHRHGAIVMMDNTWATP------LYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEA---H-GTLG-- 241 (395)
T ss_pred HHHHhCCEEEEECCccCc------eecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHH---H-HHcC--
Confidence 999999999999998632 11222334567774 6798877 224456677777765554320 0 0112
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
-..+|..+...+..|+.+.- -.++-.++...+.+.|++-. .+|++. ...|-|.+++|++.
T Consensus 242 ~~~~p~da~l~~rgl~Tl~l--R~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK05967 242 LCAGPDDTYQILRGLRTMGI--RLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLA 316 (395)
T ss_pred CCCCHHHHHHHHcCcccHHH--HHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 23567777766666655432 13444555556666665431 233322 12466889999985
No 442
>PLN02509 cystathionine beta-lyase
Probab=99.34 E-value=1e-10 Score=132.88 Aligned_cols=237 Identities=14% Similarity=0.180 Sum_probs=149.4
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCcc
Q psy8199 294 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 373 (965)
Q Consensus 294 ~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~ 373 (965)
..++...+++++++++. +.+.+++++||+.|+.+++.+. .++++||+.++.|+++.......
T Consensus 130 ~gnpt~~aLE~~lA~le--g~e~ai~~~SG~aAi~~il~ll---------~~GD~VI~~~~~y~~t~~ll~~~------- 191 (464)
T PLN02509 130 SGNPTRDALESLLAKLD--KADRAFCFTSGMAALSAVTHLI---------KNGEEIVAGDDVYGGSDRLLSQV------- 191 (464)
T ss_pred CCCHHHHHHHHHHHHHh--CCCEEEEeCcHHHHHHHHHHHh---------CCCCEEEEcCCchhhHHHHHHHH-------
Confidence 34567888889999987 4567888899998876555322 36788999999987652111000
Q ss_pred chhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy8199 374 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 453 (965)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~ 453 (965)
.......+.+++. .|++++++++. +++.+|++|. +.|++|.+.+ +++|.++|+
T Consensus 192 --l~~~G~~v~~vd~-----------------~d~e~l~~ai~---~~TklV~les-PsNPtG~i~D----l~~I~~lAk 244 (464)
T PLN02509 192 --VPRSGVVVKRVNT-----------------TNLDEVAAAIG---PQTKLVWLES-PTNPRQQISD----IRKIAEMAH 244 (464)
T ss_pred --HHHCCeEEEEeCC-----------------CCHHHHHHhCC---cCCeEEEEEC-CCCCCCCHHH----HHHHHHHHH
Confidence 0000111223221 25677887774 4567888888 8999998765 999999999
Q ss_pred hcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCC-Ccccceeeeec-HHHHHhhhccCCcccccccCCCC
Q psy8199 454 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYS 529 (965)
Q Consensus 454 ~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~g-G~~pig~v~~~-~~i~~~~~~~~~~~~~~~~~t~~ 529 (965)
+||+++|+||++. .+..+. -.+...|+++ ++|.++| |-.-.|++.++ +.+.+.+.. ........
T Consensus 245 ~~g~~lIVD~A~a-~~~~~~-----pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~------~~~~~g~~ 312 (464)
T PLN02509 245 AQGALVLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF------LQNSEGSG 312 (464)
T ss_pred HcCCEEEEECCcc-ccccCC-----hhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH------HHHhcCCC
Confidence 9999999999984 322222 1234568875 5798877 31224555554 344443221 01111122
Q ss_pred CCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 530 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 530 ~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
.+|..++.++..|+.+.. ..++..++.+++.+.|++.. .+|++. ...|-|.|+.|++.
T Consensus 313 l~p~~A~l~lr~L~tL~~--R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~ 385 (464)
T PLN02509 313 LAPFDCWLCLRGIKTMAL--RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG 385 (464)
T ss_pred cCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC
Confidence 478888888888887743 46777778888888887542 234322 13466889999873
No 443
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.33 E-value=4e-10 Score=137.88 Aligned_cols=313 Identities=15% Similarity=0.127 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEc-CChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccch
Q psy8199 297 KPVIKLSEKLSSLTQYKLGHCFYG-SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 375 (965)
Q Consensus 297 ~~~~~la~~l~~~~~~~~~~v~~~-~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~ 375 (965)
+...++.+.++++++ .+.+.+. ++|+.|+..++.++|.|+..+|..+|++|++. .+-||+...+....|
T Consensus 542 ~~i~e~q~~l~eltG--~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis-~~aH~snp~sa~~~G------- 611 (954)
T PRK05367 542 ELIDQLEAWLAEITG--YDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIP-SSAHGTNPASAVMAG------- 611 (954)
T ss_pred HHHHHHHHHHHHHHC--CCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEE-chhhhhhHHHHHHCC-------
Confidence 455678889999995 5566664 47788888888888888777776556666555 566776544332222
Q ss_pred hcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcc-cCChHHHHHHHHHHHh
Q psy8199 376 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMI-MYDSIYLKLVREICNN 454 (965)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~-~~~~~~l~~l~~l~~~ 454 (965)
..++.++.... +. .|+++|+++++++..++++|++.- ... .|.+ .+ +++|.++|++
T Consensus 612 -----~~vv~v~~d~~-G~-----------iD~~~L~~~i~~~~~~la~V~it~-pst-~G~~e~~----I~eI~~i~h~ 668 (954)
T PRK05367 612 -----MKVVVVACDEN-GN-----------IDLDDLRAKAEEHADNLAAIMITY-PST-HGVFEET----IREICEIVHE 668 (954)
T ss_pred -----CEEEEECCCCC-CC-----------cCHHHHHHHHhccCCCeEEEEEEc-CCC-CeeecCC----HHHHHHHHHH
Confidence 23455554321 11 478999999976545677776643 233 3443 45 8999999999
Q ss_pred cCCeEEEeccccCCCcccccccccccCCCcceeeec--cccC----CCcccceeeeecHHHHHhhhccCC-cccccc-cC
Q psy8199 455 YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGIT----GGYLPLSLVMTTDKIYNSIYYKNN-INIFLH-SH 526 (965)
Q Consensus 455 ~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~----gG~~pig~v~~~~~i~~~~~~~~~-~~~~~~-~~ 526 (965)
+|+++++|.++.+ +-.+. . .--....|+++++ |.++ +|+-.+|.+.+++.+...+..... ...... .+
T Consensus 669 ~G~~v~VDgA~~~-al~~l--~-~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g 744 (954)
T PRK05367 669 HGGQVYLDGANMN-AQVGL--A-RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIG 744 (954)
T ss_pred cCCEEEEECcChh-hccCC--C-ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcC
Confidence 9999999999952 11111 1 1112347998876 8653 443457778888766654432100 000000 01
Q ss_pred CCCCCHH----HHHHHHHHHHHHhcccHHHHHH---HHHHHHHHHHHcccCCCcee---eeeceeEEEEEEEeecCccch
Q psy8199 527 SYSGNPL----ACCAALATLEIFNKDNILQRIS---QDMKKITKALTSLITHPKII---NFRQKGMIWAFDVIIEDPEQI 596 (965)
Q Consensus 527 t~~~~~~----~~aaa~a~L~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~~i~---~v~g~G~~~~i~~~~~~~~~~ 596 (965)
+....+. .+..+...+..+-.+++.+..+ .+.+++.++|++....+... .+.. . +.+++..-....
T Consensus 745 ~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~-e--~i~~~~~~~~~~- 820 (954)
T PRK05367 745 AVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAH-E--CILDLRPLKEST- 820 (954)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCccc-c--eEEEeecccccC-
Confidence 2222233 1112333344444455655555 78889999887642111000 1111 1 222221000000
Q ss_pred hhHHHHHHHHHHHcCcEEee----cCCEEEEeCCcccCHHHHHHHHHhhhcccccHHH
Q psy8199 597 ETFSKKFFVAALKNELLLRP----IGNTVYLMPPYILNKNEIQHMTSAIFQTFNELDE 650 (965)
Q Consensus 597 ~~~~~~~~~~l~~~Gi~~~~----~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~~e 650 (965)
......+.++|.+.|+.... ..+.++++|.-..+.+++|++++++.....+..+
T Consensus 821 g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 821 GITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 11245688999999987643 3578999999999999999999998766554443
No 444
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.31 E-value=5.6e-10 Score=127.32 Aligned_cols=270 Identities=16% Similarity=0.104 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHH-HHhcCCCCceEEEEEcCCccCCccccccccCCcCccch
Q psy8199 297 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHY-WYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 375 (965)
Q Consensus 297 ~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~-~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~ 375 (965)
+...++.++++++++ .+++++++||++|+..|+.++... ....+-.++++||+..++|.+........+.
T Consensus 63 ~~~~~fe~~lA~~~g--~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~------- 133 (438)
T PRK15407 63 RFNDAFEKKLAEFLG--VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGL------- 133 (438)
T ss_pred hhHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCC-------
Confidence 446789999999985 568999999999999999866321 0011223568899999999766433322221
Q ss_pred hcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy8199 376 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 455 (965)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 455 (965)
..++++....... .|++++++++. +++++|++.+ + .|... .+++|+++|++|
T Consensus 134 ------~pv~vdvd~~~~~-----------id~~~le~~i~---~~tkaVi~~~-~---~G~p~----dl~~I~~la~~~ 185 (438)
T PRK15407 134 ------VPVFVDVELPTYN-----------IDASLLEAAVS---PKTKAIMIAH-T---LGNPF----DLAAVKAFCDKH 185 (438)
T ss_pred ------EEEEEecCCCcCC-----------cCHHHHHHHcC---cCCeEEEEeC-C---CCChh----hHHHHHHHHHHC
Confidence 1223332110111 26788888874 4567777766 3 34322 389999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCcceeeec----cccCCCcccceeeeecH-HHHHhhh---ccCCcc-------
Q psy8199 456 NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTTD-KIYNSIY---YKNNIN------- 520 (965)
Q Consensus 456 g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s----K~l~gG~~pig~v~~~~-~i~~~~~---~~~~~~------- 520 (965)
|++||.|++|+ +|-.-. -...|-.-|+.+|| |.++.| .-|+++.++ ++.+.+. ..+...
T Consensus 186 gi~vIeDaa~a-~G~~~~---g~~~G~~gd~~~fSf~~~k~~~~g--eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~ 259 (438)
T PRK15407 186 NLWLIEDNCDA-LGSTYD---GRMTGTFGDIATLSFYPAHHITMG--EGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCD 259 (438)
T ss_pred CCEEEEECccc-hhhhcC---CeeeeccCceEEEeCCCCCCcccc--CceEEEECCHHHHHHHHHHHHhCcccccccccc
Confidence 99999999997 542211 01112223777775 667655 237777764 4433222 111100
Q ss_pred --------------c------c---cccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceeee
Q psy8199 521 --------------I------F---LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINF 577 (965)
Q Consensus 521 --------------~------~---~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~v 577 (965)
+ + ..|..+.-+.+.+|.++.-|+.+. +..++-+++.+++.+.|..+...-.+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~--~~~~~R~~~a~~y~~~L~~~~~~~~~~~~ 337 (438)
T PRK15407 260 NTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLP--GFIEARKANFAYLKEGLASLEDFLILPEA 337 (438)
T ss_pred cccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCccccCcC
Confidence 0 0 123445567888888888888764 35677778888888888654210001111
Q ss_pred -ec-eeE--EEEEEEeecCccchhhHHHHHHHHHHHcCcEEe
Q psy8199 578 -RQ-KGM--IWAFDVIIEDPEQIETFSKKFFVAALKNELLLR 615 (965)
Q Consensus 578 -~g-~G~--~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 615 (965)
.+ ... ++.+.+. +.. ....+++.+.|.++||-.+
T Consensus 338 ~~~~~~~~~~~~i~~~--~~~--~~~Rd~l~~~L~~~GI~~~ 375 (438)
T PRK15407 338 TPNSDPSWFGFPITVK--EDA--GFTRVELVKYLEENKIGTR 375 (438)
T ss_pred CCCCeeEEEEEEEEEC--CcC--CCCHHHHHHHHHHCCCCcc
Confidence 11 122 2333332 110 1124578889999999654
No 445
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=99.31 E-value=1.4e-10 Score=117.61 Aligned_cols=157 Identities=15% Similarity=0.276 Sum_probs=115.9
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcEeEE
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCL 768 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~i~~ 768 (965)
|++||.+|.||..+... .......++++++.+.+.... ..++.+.++|| +|+... + +.++++.+++.++.+.+
T Consensus 23 t~~Cnl~C~~C~~~~~~--~~~~~~~~~~~~i~~~i~~~~-~~~~~i~~sGG-EPll~~--~-l~~li~~~~~~g~~v~i 95 (191)
T TIGR02495 23 FQGCNLKCPYCHNPELI--DREGSGEIEVEFLLEFLRSRQ-GLIDGVVITGG-EPTLQA--G-LPDFLRKVRELGFEVKL 95 (191)
T ss_pred cCCCCCCCCCCCCcccc--CCCCCCcCCHHHHHHHHHHhc-CCCCeEEEECC-cccCcH--h-HHHHHHHHHHCCCeEEE
Confidence 89999999999875321 112234589999999988653 24678888775 465542 2 77777777777777766
Q ss_pred ecCCCCHHHHHHHHHhC-CCeEeccCCCCHHHHhcccC-CCCHH-HHHHHHHHHHHcCCceeeeEEEecC-CCHHHHHHH
Q psy8199 769 TLGMLNENQAYRLKKVG-LDYYNHNLDTSPKLYGDIIS-TRDYE-NRLNTLKNVRNVGINICCGGIIGLS-ESRDQRAEL 844 (965)
Q Consensus 769 ~~~~~~~e~l~~Lk~aG-~~~i~i~~es~~~~~~~i~~-~~~~~-~~~~~i~~~~~~Gi~v~~~~i~Gl~-et~ed~~~~ 844 (965)
.....+++.++.+.++| ++.+.++++++++.+..+.+ +.+++ +.+++++.+++.|+.+....++-.+ ...+++.+.
T Consensus 96 ~TNg~~~~~l~~l~~~g~~~~v~isl~~~~~~~~~~~g~~~~~~~~~~~~i~~l~~~gi~~~i~~~v~~~~~~~~ei~~~ 175 (191)
T TIGR02495 96 DTNGSNPRVLEELLEEGLVDYVAMDVKAPPEKYPELYGLEKNGSNNILKSLEILLRSGIPFELRTTVHRGFLDEEDLAEI 175 (191)
T ss_pred EeCCCCHHHHHHHHhcCCCcEEEEeccCChHHHHHHHCCCCchHHHHHHHHHHHHHcCCCEEEEEEEeCCCCCHHHHHHH
Confidence 43334788899999999 69999999997777777754 45665 8999999999999987766666543 336788888
Q ss_pred HHHHHhcC
Q psy8199 845 IFQLANLN 852 (965)
Q Consensus 845 l~~l~~l~ 852 (965)
++++.+++
T Consensus 176 ~~~l~~~~ 183 (191)
T TIGR02495 176 ATRIKENG 183 (191)
T ss_pred HHHhccCC
Confidence 88887764
No 446
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.30 E-value=1.5e-10 Score=131.55 Aligned_cols=246 Identities=15% Similarity=0.154 Sum_probs=151.6
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
.+..++....|++.++++.+ .+.+++++||+.|+..++.... .++++|++.++.|++.....
T Consensus 59 ~r~~~p~~~~Le~~lA~leg--~~~al~~~sG~~Ai~~al~~ll--------~~GD~Vlv~~~~y~~t~~~~-------- 120 (431)
T PRK08248 59 TRIMNPTTDVFEKRIAALEG--GIGALAVSSGQAAITYSILNIA--------SAGDEIVSSSSLYGGTYNLF-------- 120 (431)
T ss_pred ECCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEccCchhhHHHHH--------
Confidence 45567778899999999985 5788999999999999987653 25688999988886642111
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
..........+.+++. .|+++++++++ +++.+|+++. +.|++|.+.+ +++|.++
T Consensus 121 -~~~~~~~Gv~v~~vd~-----------------~d~e~l~~ai~---~~tklV~l~s-p~NPtG~v~d----i~~I~~l 174 (431)
T PRK08248 121 -AHTLPKLGITVKFVDP-----------------SDPENFEAAIT---DKTKALFAET-IGNPKGDVLD----IEAVAAI 174 (431)
T ss_pred -HHHHHhCCEEEEEECC-----------------CCHHHHHHhcC---CCCeEEEEEC-CCCCCCcccC----HHHHHHH
Confidence 0001111123344432 25788888875 3567788887 7899999887 8899999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccceeeeec-HHHH-H---h---hhcc-----
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTT-DKIY-N---S---IYYK----- 516 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pig~v~~~-~~i~-~---~---~~~~----- 516 (965)
|+++|+++|+|+++.. +.. ..-.....|+++ ++|.++|....+|++++. .+.. . . +...
T Consensus 175 a~~~gi~vIvD~t~a~-~~~-----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (431)
T PRK08248 175 AHEHGIPLIVDNTFAS-PYL-----LRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYH 248 (431)
T ss_pred HHHcCCEEEEeCCCCc-ccc-----CChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccc
Confidence 9999999999999751 111 111133468875 569888743577766653 3210 0 0 0000
Q ss_pred --------C-------CcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee
Q psy8199 517 --------N-------NINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN 576 (965)
Q Consensus 517 --------~-------~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~ 576 (965)
+ .............+|..+...+..|+.+.. ..++-.++..++.+.|++.. .+|++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~--R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s 326 (431)
T PRK08248 249 GLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHL--RMERHSENALAVAKFLEEHEAVEWVSYPGLPS 326 (431)
T ss_pred cchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCcceEECCCCCC
Confidence 0 000000111234566666666665554421 35666677778888877542 2333221
Q ss_pred ----------e-eceeEEEEEEEe
Q psy8199 577 ----------F-RQKGMIWAFDVI 589 (965)
Q Consensus 577 ----------v-~g~G~~~~i~~~ 589 (965)
. .|-|.|++|++.
T Consensus 327 ~p~~~~~~~~~~~g~gg~~sf~l~ 350 (431)
T PRK08248 327 HPSYELAKKYLPKGQGAILTFGIK 350 (431)
T ss_pred CccHHHHHHhCcCCCceEEEEEec
Confidence 1 356889999985
No 447
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.30 E-value=1.3e-10 Score=130.99 Aligned_cols=315 Identities=10% Similarity=0.010 Sum_probs=178.6
Q ss_pred CHH-HHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCC-CCCeEEEcC-ChhHHHHHHHHHHHHHHHhcCCCCceE
Q psy8199 272 NSY-INKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY-KLGHCFYGS-DGASAVEVALKMSFHYWYNKGFLNKKK 348 (965)
Q Consensus 272 ~p~-v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~v~~~~-sGseA~~~Al~~a~~~~~~~g~~~~~~ 348 (965)
+|+ |.+|+...+-.. .+......+...+..+.++++++. ..++|+|++ |||++++.++..... +++..
T Consensus 24 ~~~~v~~a~~~~~~~~--~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~-------~~~~~ 94 (378)
T PRK03080 24 RPGWQLEALADALLGR--SHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLG-------ARRVD 94 (378)
T ss_pred ChHHHHHHHHhhhccc--CcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCC-------CCcce
Confidence 677 888887543211 111222345556777788888874 234788875 999999999875521 12333
Q ss_pred EEEEcCCccCCccccccccCCcCccchhcccCC-CeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEE
Q psy8199 349 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLN-KTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIII 427 (965)
Q Consensus 349 vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ 427 (965)
++. . +.||........ ..... ++..++.+... . .|++++ +. . + .|.+
T Consensus 95 vi~-~-g~f~~~~~~~~~----------~~~g~~~v~~~~~~~g~--~----------~d~~~i----~~-~-~--~V~~ 142 (378)
T PRK03080 95 HLA-W-ESFGSKWATDVV----------KQLKLEDPRVLEADYGS--L----------PDLSAV----DF-D-R--DVVF 142 (378)
T ss_pred EEE-e-CHHHHHHHHHHH----------hhcCCCCceEeccCCCC--C----------CCHhhc----CC-C-C--CEEE
Confidence 333 3 566663221100 00111 33333332110 0 123332 21 1 2 2344
Q ss_pred ccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec--cccCCCcccceeeee
Q psy8199 428 EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMT 505 (965)
Q Consensus 428 ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~gG~~pig~v~~ 505 (965)
.- +.+.+|.+.| +++|.+ +++|+++|+|-+|+ +|.. .+..+ + .|++++| |.|+|. ..+|.+..
T Consensus 143 ~h-~~t~tG~~~p----i~~I~~--~~~g~~~vVDa~qs-~G~~--pidv~--~--iD~~~~s~~K~l~~P-~G~g~l~v 207 (378)
T PRK03080 143 TW-NGTTTGVRVP----VARWIG--ADREGLTICDATSA-AFAL--PLDWS--K--LDVYTFSWQKVLGGE-GGHGMAIL 207 (378)
T ss_pred Ee-cCCccceecc----chhhcc--ccCCCeEEEecccc-cccC--CCCHH--H--CcEEEEehhhhCCCC-CceEEEEE
Confidence 44 5678899998 777777 78899999999987 5422 22222 2 4888876 888774 35889999
Q ss_pred cHHHHHhhhccC-Ccc--------------c-ccccCCCCCC-HHHHHHHHHHHHHHhcc-c---HHHHHHHHHHHHHHH
Q psy8199 506 TDKIYNSIYYKN-NIN--------------I-FLHSHSYSGN-PLACCAALATLEIFNKD-N---ILQRISQDMKKITKA 564 (965)
Q Consensus 506 ~~~i~~~~~~~~-~~~--------------~-~~~~~t~~~~-~~~~aaa~a~L~~~~~~-~---~~~~~~~~~~~l~~~ 564 (965)
+++.++.+.... .+. . ...++|.+.. ..+..+..++|+.+.+. + ..++.+++.+++++.
T Consensus 208 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~ 287 (378)
T PRK03080 208 SPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDW 287 (378)
T ss_pred CHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 998887654310 000 0 0112343333 33555667888887654 3 445666677777777
Q ss_pred HHcccCCCcee-eeece-eEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----CCEEEEeCCcccCHHHHHHH
Q psy8199 565 LTSLITHPKII-NFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHM 637 (965)
Q Consensus 565 L~~l~~~~~i~-~v~g~-G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~ 637 (965)
|+++.....+. .-... +.+..+.+. +. .......+...+.++|++++.+ ++.+|+++....+.++++.+
T Consensus 288 l~~~~~~~~~~~~~~~~s~~i~~~~~~--~~--~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l 363 (378)
T PRK03080 288 AEKTPWATPLVADPATRSNTSVTLDFV--DA--QAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEAL 363 (378)
T ss_pred HHhCCCcccccCCccccCccEEEEEcC--Cc--hHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHH
Confidence 77652111111 00112 245666543 10 0012223556677778887642 36899999999999999999
Q ss_pred HHhhhcccc
Q psy8199 638 TSAIFQTFN 646 (965)
Q Consensus 638 ~~~l~~~~~ 646 (965)
++.+.+++.
T Consensus 364 ~~al~~~~~ 372 (378)
T PRK03080 364 TPWLDWAFE 372 (378)
T ss_pred HHHHHHHHH
Confidence 999876543
No 448
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.30 E-value=3.1e-10 Score=127.77 Aligned_cols=243 Identities=14% Similarity=0.167 Sum_probs=154.5
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCcc
Q psy8199 294 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 373 (965)
Q Consensus 294 ~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~ 373 (965)
..++....|++.++++.+ ...++.++||+.|+.+++..+. .++++||+....|.+.......
T Consensus 58 ~~nPtv~~lE~~la~leg--~~~av~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~-------- 119 (432)
T PRK06702 58 IGNPTLAAFEQKLAELEG--GVGAVATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGV-------- 119 (432)
T ss_pred CCCcHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHH--------
Confidence 346778999999999984 4678889999999999998653 3678999999999765221000
Q ss_pred chhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy8199 374 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 453 (965)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~ 453 (965)
........+.++... .|+++++++|. +++.+|++|. +.|+++.+++ +++|.++|+
T Consensus 120 -~l~~~Gi~v~~vd~~----------------~d~~~l~~~I~---~~Tk~I~~e~-pgnP~~~v~D----i~~I~~iA~ 174 (432)
T PRK06702 120 -SLRKLGIDVTFFNPN----------------LTADEIVALAN---DKTKLVYAES-LGNPAMNVLN----FKEFSDAAK 174 (432)
T ss_pred -HHHHCCCEEEEECCC----------------CCHHHHHHhCC---cCCeEEEEEc-CCCccccccC----HHHHHHHHH
Confidence 011111233343220 26788888885 3567888998 7888888877 999999999
Q ss_pred hcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccce-eeeecH----------HHHH---------
Q psy8199 454 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLS-LVMTTD----------KIYN--------- 511 (965)
Q Consensus 454 ~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pig-~v~~~~----------~i~~--------- 511 (965)
+||+++|+|+++. .+..++-+....|++ +++|-++|...-+| +++... ++.+
T Consensus 175 ~~gi~livD~T~~------tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~ 248 (432)
T PRK06702 175 ELEVPFIVDNTLA------TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVS 248 (432)
T ss_pred HcCCEEEEECCCC------chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccc
Confidence 9999999999863 123344344557877 47897776222333 333211 1110
Q ss_pred --------h-hhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee-
Q psy8199 512 --------S-IYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN- 576 (965)
Q Consensus 512 --------~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~- 576 (965)
. +.. .............+|..+..++..|+.+. -..++-.++...+.+.|++.. .+|++..
T Consensus 249 ~~~~~~~~~~~~~--~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~--lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~ 324 (432)
T PRK06702 249 YVQNFGAAAYIVK--ARVQLLRDYGNCMSPFNAYISNIGLETLH--LRMERHSENALAVAKWLADHERIEWVNYPGLDSN 324 (432)
T ss_pred hhhccchhhHHHH--HHHHHHHHccCCCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCC
Confidence 0 000 00001112334778998888888887553 235666678888888887542 2344321
Q ss_pred ---------e-eceeEEEEEEEe
Q psy8199 577 ---------F-RQKGMIWAFDVI 589 (965)
Q Consensus 577 ---------v-~g~G~~~~i~~~ 589 (965)
. .|-|.|+.|++.
T Consensus 325 p~~~l~~~~~~~g~gg~~sf~l~ 347 (432)
T PRK06702 325 ENYSLAQKYLKKGASGVLTFGIK 347 (432)
T ss_pred ccHHHHHHhCcCCCceEEEEEec
Confidence 1 467889999985
No 449
>PRK04311 selenocysteine synthase; Provisional
Probab=99.30 E-value=2.1e-09 Score=122.23 Aligned_cols=332 Identities=13% Similarity=0.107 Sum_probs=190.3
Q ss_pred EEEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhcccc--cc-CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCCh
Q psy8199 247 KLITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV--ML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDG 323 (965)
Q Consensus 247 ~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~--~~-~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sG 323 (965)
.++...|..|.+..+... -++++.+|+.+.+...... .. .+...+....+.+.++++++ .+.+++++||
T Consensus 80 ~vinatg~v~~tNlg~s~------l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~G--ae~a~vv~sg 151 (464)
T PRK04311 80 PVINATGVVLHTNLGRAL------LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTG--AEDALVVNNN 151 (464)
T ss_pred ceecCCccEEeccCCCCC------CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhC--CCeEEEECCH
Confidence 466666766666543311 4789999999887654211 01 12223445688899999985 5678899999
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCceEEEEEcCC-cc-CCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChh
Q psy8199 324 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNS-YH-GETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN 401 (965)
Q Consensus 324 seA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~-yH-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (965)
+.|+..++... .++++||+.++. || |.+... ............++...+ .
T Consensus 152 taAl~l~l~~l---------~~GdeVIvs~~e~~~~ggs~~i---------~~~~~~~G~~l~~v~~~~---~------- 203 (464)
T PRK04311 152 AAAVLLALNAL---------AAGKEVIVSRGELVEIGGAFRI---------PDVMRQAGARLVEVGTTN---R------- 203 (464)
T ss_pred HHHHHHHHHHh---------CCCCEEEEcchhhhhcCcchhh---------HHHHHHCCcEEEEECCCC---C-------
Confidence 99999888543 356778887763 32 221110 000001111223333211 0
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccccC--CC--cccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccc----
Q psy8199 402 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCA--GG--MIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK---- 473 (965)
Q Consensus 402 ~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~--~G--~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~---- 473 (965)
.++++++++|. +++++|+++. ..|. .| ...+ +++|.++|++||+++|+|.. .|-.+.
T Consensus 204 ----t~~~dle~aI~---~~TklV~~vh-~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~g---sG~l~~~~~~ 268 (464)
T PRK04311 204 ----THLRDYEQAIN---ENTALLLKVH-TSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLG---SGSLVDLSQY 268 (464)
T ss_pred ----CCHHHHHHhcC---ccCeEEEEEc-CCCccccccCCcCC----HHHHHHHHHHcCCeEEEECC---Ccccccchhc
Confidence 24678888885 3567777766 4443 34 3445 99999999999999999984 222221
Q ss_pred -----cccccccCCCcceeeec--cccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy8199 474 -----FFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 546 (965)
Q Consensus 474 -----~~~~~~~~~~pDivt~s--K~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~ 546 (965)
....+......|+++|| |.++|. ..|++++++++++.+...+ ..-.+..+-...++-.++|....
T Consensus 269 gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~------~~r~lr~dk~~l~~l~~~l~~~~ 340 (464)
T PRK04311 269 GLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHP------LKRALRVDKLTLAALEATLRLYL 340 (464)
T ss_pred cCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhch------hHHHHhcchHHHHHHHHHHHHHh
Confidence 11112223468999998 888774 3788889999988775411 11222334445555555555221
Q ss_pred c--ccH------------HHHHHHHHHHHHHHHHcccCCCc--eeeee-----ceeEE-------EEEEEeecCccchhh
Q psy8199 547 K--DNI------------LQRISQDMKKITKALTSLITHPK--IINFR-----QKGMI-------WAFDVIIEDPEQIET 598 (965)
Q Consensus 547 ~--~~~------------~~~~~~~~~~l~~~L~~l~~~~~--i~~v~-----g~G~~-------~~i~~~~~~~~~~~~ 598 (965)
+ +.+ .++..++.+++.+.|+.... ++ +..+. |-|.+ +.+.+. .. .-
T Consensus 341 ~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~-~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~-~~----~~ 414 (464)
T PRK04311 341 DPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALG-AAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLT-PK----DR 414 (464)
T ss_pred ChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccC-CCeeEEEEEccCccCCCCCcCCCCCeEEEEEe-CC----CC
Confidence 1 111 25566667777777755311 11 11111 11211 223332 11 11
Q ss_pred HHHHHHHHHHH--cCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 599 FSKKFFVAALK--NELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 599 ~~~~~~~~l~~--~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
.+..+.++|++ -.|+.+...+.+.+-| .++.+++++.+++++.+.
T Consensus 415 ~~~~l~~~lr~~~~~i~~r~~~~~~~ld~-r~~~~~~~~~~~~~~~~~ 461 (464)
T PRK04311 415 SLEALAARLRLLPPPVIGRIEDGRLLLDL-RTLEEEDEERLAAALLEA 461 (464)
T ss_pred CHHHHHHHHhcCCCCEEEEEECCEEEEEe-CcCCHHHHHHHHHHHHHH
Confidence 23467777775 4577777777888875 477888888888887654
No 450
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.29 E-value=2e-10 Score=128.84 Aligned_cols=240 Identities=13% Similarity=0.073 Sum_probs=141.9
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
+..+.++....|+++++++.+ .+..++++||+.|+.+++.+. .++++|++.++.|++........
T Consensus 44 y~r~~~p~~~~Le~~la~l~g--~~~al~~~SG~~Al~~~l~~l---------~pGd~Vi~~~~~y~~t~~~~~~~---- 108 (380)
T PRK06176 44 YSRSGNPTRFALEELIADLEG--GVKGFAFASGLAGIHAVFSLF---------QSGDHVLLGDDVYGGTFRLFDKV---- 108 (380)
T ss_pred ccCCCChhHHHHHHHHHHHhC--CCCEEEECCHHHHHHHHHHHc---------CCCCEEEEcCCChhHHHHHHHHH----
Confidence 356677888999999999985 456788899999998666432 25688999998886652111000
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
.......+.+++. .|+++++++++ +++.+|++|. ++|++|.+.+ +++|.+
T Consensus 109 -----~~~~gi~v~~vd~-----------------~d~e~l~~ai~---~~t~lV~les-P~Nptg~~~d----i~~I~~ 158 (380)
T PRK06176 109 -----LVKNGLSCTIIDT-----------------SDLSQIKKAIK---PNTKALYLET-PSNPLLKITD----LAQCAS 158 (380)
T ss_pred -----HHhcCeEEEEcCC-----------------CCHHHHHHhcC---cCceEEEEEC-CCCCCceecC----HHHHHH
Confidence 0111112233322 25778888774 3578888887 7899998876 899999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCcceeee--ccccCCCccc-ceeeeec-HHHHHhhhccCCcccccccC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGYLP-LSLVMTT-DKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~--sK~l~gG~~p-ig~v~~~-~~i~~~~~~~~~~~~~~~~~ 526 (965)
+|++||+++|+|++++.. ..+.. .+...|++++ +|.++|..-. .|+++++ +++.+.+.. +....
T Consensus 159 la~~~gi~vivD~t~a~~-~~~~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~------~~~~~ 226 (380)
T PRK06176 159 VAKDHGLLTIVDNTFATP-YYQNP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAF------FQNAI 226 (380)
T ss_pred HHHHcCCEEEEECCcccc-ccCCc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHH------HHHHh
Confidence 999999999999998632 11221 2345688865 5988762112 3455653 556554432 11111
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
....+|..+......|+.+.. ..++..++..++.+.|++.. .+|++. ...|-|.+++|++.
T Consensus 227 G~~~~~~~~~l~~~gl~tl~~--R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~ 302 (380)
T PRK06176 227 GGVLGPQDSWLLQRGIKTLGL--RMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLK 302 (380)
T ss_pred cCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 111245544444444432211 12333344445555554321 123221 13467889999985
No 451
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.29 E-value=1.2e-09 Score=118.41 Aligned_cols=320 Identities=14% Similarity=0.120 Sum_probs=191.9
Q ss_pred CHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCC-CeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEE
Q psy8199 272 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFI 350 (965)
Q Consensus 272 ~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi 350 (965)
+|+|.+|+.+..-. +.+.-......++.+.|...++... +-+++..||+-|+|+|+..... ++++|+
T Consensus 17 ~~~V~~am~~~~~~----h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~--------pgdkVL 84 (383)
T COG0075 17 PPRVLLAMARPMVG----HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVE--------PGDKVL 84 (383)
T ss_pred CHHHHHHhcCCCCC----CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccC--------CCCeEE
Confidence 46666665543211 1111223344566666777775433 5567789999999999987643 678888
Q ss_pred EEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC--cEEEEEEc
Q psy8199 351 CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHN--KIAAIIIE 428 (965)
Q Consensus 351 ~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~--~~aaii~e 428 (965)
+...+..|.-+ .....-+..++..+..+.... .++++++++|++.++ -++++.+|
T Consensus 85 v~~nG~FG~R~-----------~~ia~~~g~~v~~~~~~wg~~------------v~p~~v~~~L~~~~~~~~V~~vH~E 141 (383)
T COG0075 85 VVVNGKFGERF-----------AEIAERYGAEVVVLEVEWGEA------------VDPEEVEEALDKDPDIKAVAVVHNE 141 (383)
T ss_pred EEeCChHHHHH-----------HHHHHHhCCceEEEeCCCCCC------------CCHHHHHHHHhcCCCccEEEEEecc
Confidence 88888777632 222222223343333322111 368999999985432 23444455
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeee--ccccCCCcccceeeeec
Q psy8199 429 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGYLPLSLVMTT 506 (965)
Q Consensus 429 p~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~--sK~l~gG~~pig~v~~~ 506 (965)
. ++|+..| +++|.++|++||+++|+|-|-+ +| |..+-.+.||+ |+++- -|+|++- -.+|.+..+
T Consensus 142 T----STGvlnp----l~~I~~~~k~~g~l~iVDaVsS-~G--g~~~~vd~wgi--Dv~itgSQK~l~~P-PGla~v~~S 207 (383)
T COG0075 142 T----STGVLNP----LKEIAKAAKEHGALLIVDAVSS-LG--GEPLKVDEWGI--DVAITGSQKALGAP-PGLAFVAVS 207 (383)
T ss_pred C----cccccCc----HHHHHHHHHHcCCEEEEEeccc-CC--CcccchhhcCc--cEEEecCchhccCC-CccceeEEC
Confidence 4 6888888 9999999999999999999876 65 44566666775 66654 4899874 356788889
Q ss_pred HHHHHhhhccCCc---------cccc---ccCCCCCCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHcccCC
Q psy8199 507 DKIYNSIYYKNNI---------NIFL---HSHSYSGNPLACCAALATLEIFNKDN---ILQRISQDMKKITKALTSLITH 571 (965)
Q Consensus 507 ~~i~~~~~~~~~~---------~~~~---~~~t~~~~~~~~aaa~a~L~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~ 571 (965)
++.++.+...... ..++ ..+.|+.+.....+..++|+.+.+++ ..++-+++++.++++++++ ..
T Consensus 208 ~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl 286 (383)
T COG0075 208 ERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GL 286 (383)
T ss_pred HHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 9888877652111 0011 22334444456777778999887654 5666777888888888876 11
Q ss_pred Cceeeeecee-EEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----CCEEEEeCCcccCHHHHHHHHHhhhccc
Q psy8199 572 PKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQTF 645 (965)
Q Consensus 572 ~~i~~v~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~~~~l~~~~ 645 (965)
..+.+..-.. .+..+... .+ ..........+.+.|+.+.++ +..+||.--=..+..++..++.+++.++
T Consensus 287 ~~~~~~~~~s~tvta~~~P--~g---~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L 361 (383)
T COG0075 287 ELFADPERRSPTVTAIKVP--EG---VDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAAL 361 (383)
T ss_pred ccccCcccCCCceEEEECC--CC---CCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHH
Confidence 1111111111 22333322 11 011112223344558887753 3589998555567777777777766554
Q ss_pred c
Q psy8199 646 N 646 (965)
Q Consensus 646 ~ 646 (965)
.
T Consensus 362 ~ 362 (383)
T COG0075 362 R 362 (383)
T ss_pred H
Confidence 3
No 452
>PRK14460 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.28 E-value=3.6e-10 Score=123.62 Aligned_cols=188 Identities=16% Similarity=0.231 Sum_probs=141.8
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHH---H-HC--C---CCEEEEeeccCCCCcccHHHHHHHHHHH
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKA---K-SD--G---ATRFCMGAAWRELKDRDLDNIENMICEV 759 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~---~-~~--g---~~~i~l~~g~~~~~~~~~~~~~~~~~~i 759 (965)
..+|+.+|.||..... + ..+.++++||++++... . +. | ++.|.+.|+++|+.. ++.+.+.++.+
T Consensus 109 q~GC~~~C~FC~tg~~---g--~~rnlt~~EI~~qv~~~~~~~~~~g~g~~~i~nIvfmGmGEPLln--~~~v~~~l~~l 181 (354)
T PRK14460 109 QVGCAMGCTFCSTGTM---G--FERNMTMGEILGQVLVAREHLGDNGPDHPILRNLVFMGMGEPLLN--LDEVMRSLRTL 181 (354)
T ss_pred CCCcCCCCccCCCCCC---C--CCcCCCHHHHHHHHHHHHHHHhhccCCCcceeEEEEecCCcccCC--HHHHHHHHHHH
Confidence 6899999999974432 1 13358999999998433 2 22 2 678889887778654 78889999988
Q ss_pred Hh-cCc-----EeEE-ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCC---CCHHHHHHHHHH-HHHcCCce-
Q psy8199 760 KK-IGL-----ETCL-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIST---RDYENRLNTLKN-VRNVGINI- 826 (965)
Q Consensus 760 ~~-~~~-----~i~~-~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~---~~~~~~~~~i~~-~~~~Gi~v- 826 (965)
++ .++ .+++ +.|. .+.++.|.++|+..+.+++++ +++.++++.+. .+.++.+++++. ..+.|-++
T Consensus 182 ~~~~Gl~~~~r~itvsT~G~--~~~i~~L~~~~l~~L~iSLha~~~e~r~~i~p~~~~~~l~~ll~al~~~~~~~~~~v~ 259 (354)
T PRK14460 182 NNEKGLNFSPRRITVSTCGI--EKGLRELGESGLAFLAVSLHAPNQELRERIMPKAARWPLDDLIAALKSYPLKTRERVT 259 (354)
T ss_pred hhhhccCCCCCeEEEECCCC--hHHHHHHHhCCCcEEEEeCCCCCHHHHHHhcCccccCCHHHHHHHHHHHHHhcCCeEE
Confidence 75 354 3444 3454 678999999999999999999 99999999874 478888888875 34455444
Q ss_pred -eeeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 827 -CCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 827 -~~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
..-+|-|.+++.+|+.+.+++++.++ ..|.+-+|.|.+|.++ ++++.+++.+...+++.
T Consensus 260 iey~LI~GvNDs~ed~~~l~~~l~~~~---~~VnLIpyn~~~g~~y---~~p~~e~v~~f~~~l~~ 319 (354)
T PRK14460 260 FEYLLLGGVNDSLEHARELVRLLSRTK---CKLNLIVYNPAEGLPY---SAPTEERILAFEKYLWS 319 (354)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhcCC---CcEEEEcCCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 45666677899999999999999986 4688888888888875 46688887777666654
No 453
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.28 E-value=4.8e-10 Score=122.76 Aligned_cols=189 Identities=12% Similarity=0.145 Sum_probs=137.5
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHH--------HHCCCCEEEEeeccCCCCcccHHHHHHHHHHHH
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKA--------KSDGATRFCMGAAWRELKDRDLDNIENMICEVK 760 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~--------~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~ 760 (965)
..+|+.+|.||..... + ..+.++.+||++++..+ ...+++.|.+.|-++|+.. .+.+.++++.++
T Consensus 128 q~GCnl~C~FC~tg~~---g--~~rnLt~~EI~~qv~~~~~~~~~~~~~~~v~nIvfmGmGEPLln--~d~v~~~i~~l~ 200 (368)
T PRK14456 128 QAGCALRCSFCATGQM---G--FRRNLTAGEITGQVFALSDMLAERNRERGITNIVFMGMGEPLLN--TDNVFEAVLTLS 200 (368)
T ss_pred cCCCCCCCCCCCCCCC---C--CCCCCCHHHHHHHHHHHHHHHHhhhccCCccEEEEeCcCccccC--HHHHHHHHHHHh
Confidence 7899999999975432 1 12348999999987443 2357899999995567555 456777777776
Q ss_pred hc----Cc---EeEEecCCCCHHHHHHHHHhCCC-eEeccCCC-CHHHHhcccC----CCCHHHHHHHHH-HHHHcCCce
Q psy8199 761 KI----GL---ETCLTLGMLNENQAYRLKKVGLD-YYNHNLDT-SPKLYGDIIS----TRDYENRLNTLK-NVRNVGINI 826 (965)
Q Consensus 761 ~~----~~---~i~~~~~~~~~e~l~~Lk~aG~~-~i~i~~es-~~~~~~~i~~----~~~~~~~~~~i~-~~~~~Gi~v 826 (965)
+. ++ .++++.-.+.+ .+++|.++|++ .+.+++++ +++.++++.+ ..+.++.+++++ .+.+.|.++
T Consensus 201 ~~~~~~~is~r~ItisT~Gl~~-~i~~L~~~gl~~~LaiSL~a~~~e~r~~i~P~~~~~~~l~~l~~~i~~~~~~~g~~V 279 (368)
T PRK14456 201 TRKYRFSISQRKITISTVGITP-EIDRLATSGLKTKLAVSLHSADQEKRERLMPQAARDYPLDELREALIGYASKTGEPV 279 (368)
T ss_pred ccccccCcCcCeeEEECCCChH-HHHHHHHcCCCceEEEEecCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHhcCCeE
Confidence 53 12 33343222444 57999999996 89999999 9999999963 558899999998 477788665
Q ss_pred e--eeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 827 C--CGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 827 ~--~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
. .-+|-|..++.+|+.+++++++.+. ..|.+-+|.|.++.++ .+++.+.+.+...+++.
T Consensus 280 ~ieyvLI~GvNDs~eda~~L~~~l~~~~---~~VnlIpyn~~~~~~~---~~ps~e~i~~F~~~L~~ 340 (368)
T PRK14456 280 TLVYMLLEGINDSPEDARKLIRFASRFF---CKINLIDYNSIVNIKF---EPVCSSTRERFRDRLLD 340 (368)
T ss_pred EEEEEEEcCCCCCHHHHHHHHHHHhcCC---CeeEEeeeccCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 4 5566677899999999999999985 4566667777777665 35677777776666654
No 454
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.28 E-value=2.7e-10 Score=127.79 Aligned_cols=240 Identities=15% Similarity=0.121 Sum_probs=148.1
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
+..+.++...+|+++++++.+ .+..++++||+.|+..++.++ .++++||+.++.|.+........
T Consensus 44 y~r~~~p~~~~Le~~lA~l~g--~~~~~~~~sG~aai~~~~~~l---------~~Gd~Viv~~~~y~~~~~~~~~~---- 108 (377)
T PRK07671 44 YSRTGNPTRAALEELIAVLEG--GHAGFAFGSGMAAITAVMMLF---------SSGDHVILTDDVYGGTYRVMTKV---- 108 (377)
T ss_pred cCCCCChHHHHHHHHHHHHhC--CCceEEeCCHHHHHHHHHHHh---------CCCCEEEECCCccchHHHHHHHH----
Confidence 346678888999999999985 456677888998887665432 35688999999886542110000
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
.......+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.+
T Consensus 109 -----~~~~G~~v~~v~~-----------------~d~~~l~~ai~---~~tklV~le~-P~NPtg~~~d----l~~I~~ 158 (377)
T PRK07671 109 -----LNRFGIEHTFVDT-----------------SNLEEVEEAIR---PNTKAIYVET-PTNPLLKITD----IKKIST 158 (377)
T ss_pred -----HhcCCeEEEEECC-----------------CCHHHHHHhcC---CCCeEEEEEC-CCCCCCcccC----HHHHHH
Confidence 0001112333332 26788888875 3567888887 7899998776 999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCc-ccceeeee-cHHHHHhhhccCCcccccccC
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGY-LPLSLVMT-TDKIYNSIYYKNNINIFLHSH 526 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~-~pig~v~~-~~~i~~~~~~~~~~~~~~~~~ 526 (965)
+|+++|+++|+||++... ..+.. .....|+++ ++|.++|.. .-.|++++ ++++++.+.. +....
T Consensus 159 la~~~g~~lvvD~a~~~~-~~~~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~------~~~~~ 226 (377)
T PRK07671 159 IAKEKGLLTIVDNTFMTP-YWQSP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHF------VQNST 226 (377)
T ss_pred HHHHcCCEEEEECCCCcc-ccCCh-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHH------HHHhh
Confidence 999999999999998531 12221 223457774 679887621 12344555 5567665543 11111
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 527 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
.-..+|..+..++..++.+.. ..++..++..++.+.|++.. .+|++. ...|-|.++.|++.
T Consensus 227 g~~~~~~~a~l~~~~l~tl~~--R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~ 302 (377)
T PRK07671 227 GGILGPQDSWLLLRGLKTLGI--RMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG 302 (377)
T ss_pred cCCCCHHHHHHHHcCcChHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeC
Confidence 223456666666665554432 35555667777777776432 233322 12466889999883
No 455
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.27 E-value=2.6e-09 Score=128.23 Aligned_cols=312 Identities=12% Similarity=0.137 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHhhcCCCCC-eEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccch
Q psy8199 297 KPVIKLSEKLSSLTQYKLG-HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 375 (965)
Q Consensus 297 ~~~~~la~~l~~~~~~~~~-~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~ 375 (965)
+...++.+.|+++++ .+ -.++.++|+.|..+++.++|.|+..+|+.+|++|+ ...+-||+...+....|
T Consensus 530 q~i~elq~~l~eltG--md~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vl-ip~saHgtnPasa~~~G------- 599 (939)
T TIGR00461 530 ELIAQLEKWLCSITG--FDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICL-IPVSAHGTNPASAAMAG------- 599 (939)
T ss_pred HHHHHHHHHHHHHHC--CCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEE-EEccccCcCHHHHHHCC-------
Confidence 556789999999995 44 44567888888888999999999888886665554 45578888544432222
Q ss_pred hcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy8199 376 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 455 (965)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 455 (965)
..++.+|... .+. .|+++|+++++++.+++++|++.- +++ .|.+.++ +++|.++|+++
T Consensus 600 -----~~Vv~V~~d~-~G~-----------iDle~L~~~i~~~~~~taaV~iT~-pst-~G~~e~~---I~eI~~iah~~ 657 (939)
T TIGR00461 600 -----MQVVPVNCDQ-DGN-----------IDLVDLKNKAEQHGDELAAVMVTY-PST-HGVFEPT---IQHACDIVHSF 657 (939)
T ss_pred -----CEEEEeccCC-CCC-----------cCHHHHHHHHhhcCCceEEEEEEe-CCc-Cceeccc---HHHHHHHHHHc
Confidence 1344555421 111 488999999986556788888765 344 5665443 89999999999
Q ss_pred CCeEEEeccccC-CCcccccccccccCCCcceeeec--cccC----CCcccceeeeecHHHHHhhhccC--C-------c
Q psy8199 456 NIHLIADEIAVG-CGRTGKFFACEHAEIWPDFLCLS--KGIT----GGYLPLSLVMTTDKIYNSIYYKN--N-------I 519 (965)
Q Consensus 456 g~llI~DEv~tg-~gr~G~~~~~~~~~~~pDivt~s--K~l~----gG~~pig~v~~~~~i~~~~~~~~--~-------~ 519 (965)
|.++++|-++.. .+ + ...--....|+++++ |.++ +|+-.+|.+.+++++...+..+. . .
T Consensus 658 G~~v~VDgAq~~al~--~---l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~gre 732 (939)
T TIGR00461 658 GGQVYLDGANMNAQV--G---LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGS 732 (939)
T ss_pred CCEEEEEecChhhCC--C---CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCc
Confidence 999999999853 21 1 111113457999885 8665 23346788888887655443210 0 0
Q ss_pred cc-ccccCCCCCCHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHcccCCCceeeeec-eeEE---EEEEEeec
Q psy8199 520 NI-FLHSHSYSGNPLACCAALATLEIFNKDNI---LQRISQDMKKITKALTSLITHPKIINFRQ-KGMI---WAFDVIIE 591 (965)
Q Consensus 520 ~~-~~~~~t~~~~~~~~aaa~a~L~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~i~~v~g-~G~~---~~i~~~~~ 591 (965)
.. ...++...++.+.+..+...|..+-.+++ .+..-.+..|+.++|.+. .+.+ ..+ .|.+ +.+++. .
T Consensus 733 q~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l--~~~~~~~~~hEfv~~~~-~ 807 (939)
T TIGR00461 733 KSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPIL--FVGTLKHVAHECILDLR-P 807 (939)
T ss_pred cccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--Cccc--ccCCCCceeEEEEEecc-c
Confidence 00 01112234555555556666666665544 344445778888888753 1111 111 1221 222221 0
Q ss_pred CccchhhHHHHHHHHHHHcCcEEe----ecCCEEEEeCCcccCHHHHHHHHHhhhcccccHHH
Q psy8199 592 DPEQIETFSKKFFVAALKNELLLR----PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNELDE 650 (965)
Q Consensus 592 ~~~~~~~~~~~~~~~l~~~Gi~~~----~~~~~lR~~p~~~~t~~~i~~~~~~l~~~~~~~~e 650 (965)
...........+.++|.+.|+... |..+.+.+.|.-..+.++||++++++.....+.++
T Consensus 808 ~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 808 LKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred hhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 000111234578899999999753 22357888888999999999999998766554443
No 456
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.27 E-value=8.1e-11 Score=116.95 Aligned_cols=166 Identities=24% Similarity=0.250 Sum_probs=112.6
Q ss_pred HHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhccc
Q psy8199 300 IKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSL 379 (965)
Q Consensus 300 ~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~ 379 (965)
.++.+++++.++.+.+.+.+++||++|++.+++.++. .+++|++.++.||+.........+
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~~~g----------- 63 (170)
T cd01494 3 EELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG--------PGDEVIVDANGHGSRYWVAAELAG----------- 63 (170)
T ss_pred HHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC--------CCCEEEEeecccceehhhHHHhcC-----------
Confidence 4677888888855677899999999999999998743 367899999999887421111111
Q ss_pred CCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeE
Q psy8199 380 LNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHL 459 (965)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 459 (965)
.....++.+...... .+.+.+++... ..+++++++++ +++++|...+ +++|.++|+++|+++
T Consensus 64 -~~~~~v~~~~~~~~~----------~~~~~~~~~~~--~~~~~~v~~~~-~~~~~g~~~~----~~~l~~~~~~~~~~l 125 (170)
T cd01494 64 -AKPVPVPVDDAGYGG----------LDVAILEELKA--KPNVALIVITP-NTTSGGVLVP----LKEIRKIAKEYGILL 125 (170)
T ss_pred -CEEEEeccCCCCccc----------hhhhhhhhccc--cCceEEEEEec-CcCCCCeEcC----HHHHHHHHHHcCCEE
Confidence 123333332111100 12223433222 46789999998 8888888776 589999999999999
Q ss_pred EEeccccCCCcccccccccccCCCcceeeec--cccCCCcccceeeeec
Q psy8199 460 IADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT 506 (965)
Q Consensus 460 I~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~gG~~pig~v~~~ 506 (965)
|+|+++.++...... .......+|+++.| |.+++ .++|+++++
T Consensus 126 i~D~a~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 126 LVDAASAGGASPAPG--VLIPEGGADVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred EEecccccccccccc--cccccccCCEEEEEcccccCC--CceEEEEeC
Confidence 999999876543222 12223458999877 99977 478887754
No 457
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.27 E-value=4e-10 Score=127.81 Aligned_cols=242 Identities=12% Similarity=0.112 Sum_probs=148.0
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
.+..++....|+++++++.+ .+.+++++||+.|+..++.... .++++||+....|.+. ...+..
T Consensus 64 sr~~~p~~~~Le~~lA~l~g--~~~av~~sSG~aAi~~al~all--------~~Gd~Vv~~~~~y~~t-~~~~~~----- 127 (436)
T PRK07812 64 TRIMNPTQDVVEQRIAALEG--GVAALLLASGQAAETFAILNLA--------GAGDHIVSSPRLYGGT-YNLFHY----- 127 (436)
T ss_pred cCCCCchHHHHHHHHHHHhC--CCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEeCCcchHH-HHHHHH-----
Confidence 34557778899999999984 5678999999999999997553 2567888887776443 111000
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
........+.+++.+ .|+++++++++ +++.+|++|. +.|+.|.+.+ +++|.++
T Consensus 128 ---~l~~~Gi~v~~vdd~----------------~d~e~l~~ai~---~~tklV~ie~-~sNp~G~v~D----l~~I~~l 180 (436)
T PRK07812 128 ---TLPKLGIEVSFVEDP----------------DDLDAWRAAVR---PNTKAFFAET-ISNPQIDVLD----IPGVAEV 180 (436)
T ss_pred ---HhhcCeEEEEEECCC----------------CCHHHHHHhCC---CCCeEEEEEC-CCCCCCeecC----HHHHHHH
Confidence 000011123333211 26778887774 4578899998 8999999988 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccceeeee-cHHH-------------------
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMT-TDKI------------------- 509 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pig~v~~-~~~i------------------- 509 (965)
|++||+++|+|+++. .+.. ........|+++ ++|.++|..--+|.++. +..+
T Consensus 181 a~~~gi~liVD~t~a-~~~~-----~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~ 254 (436)
T PRK07812 181 AHEAGVPLIVDNTIA-TPYL-----IRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHG 254 (436)
T ss_pred HHHcCCEEEEECCCc-cccc-----CCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCccccc
Confidence 999999999999875 2211 111233478774 67988762123444443 2211
Q ss_pred -----------HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCc
Q psy8199 510 -----------YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPK 573 (965)
Q Consensus 510 -----------~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~ 573 (965)
+..... ..........+|..+...+..|+.+.. ..++-.++..++.+.|++.. .+|+
T Consensus 255 ~~~~~~~~~~~~~~~~~-----~~~~~~G~~l~p~~a~l~~rgl~tL~~--R~~~~~~nA~~la~~L~~~p~v~~V~yPg 327 (436)
T PRK07812 255 VVFAELGPPAYALKARV-----QLLRDLGSAISPFNAFLIAQGLETLSL--RIERHVANAQRVAEFLEARDEVASVNYAG 327 (436)
T ss_pred chhhhcchhHHHHHHHH-----HHHHhcCCCCCHHHHHHHhcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 000000 001112234567776666666654432 35666677777888777542 2343
Q ss_pred eee----------e-eceeEEEEEEEe
Q psy8199 574 IIN----------F-RQKGMIWAFDVI 589 (965)
Q Consensus 574 i~~----------v-~g~G~~~~i~~~ 589 (965)
+.. . .|-|.+++|++.
T Consensus 328 l~s~p~~~~~~~~~~~g~gg~~sf~l~ 354 (436)
T PRK07812 328 LPSSPWYERAKRLAPKGTGAVLSFELA 354 (436)
T ss_pred CCCCccHHHHHHhCcCCCceEEEEEec
Confidence 221 1 467889999985
No 458
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.26 E-value=4.2e-09 Score=119.54 Aligned_cols=328 Identities=14% Similarity=0.131 Sum_probs=185.4
Q ss_pred EEecCCcccccccccchhccCCCCCHHHHHHHHHHHhhcccc--cc-CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChh
Q psy8199 248 LITFSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV--ML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGA 324 (965)
Q Consensus 248 ~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~av~~~~~~~~~~--~~-~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGs 324 (965)
++...|..|.+..+. +.-++++++|+.+.+...... .. .+........+++.++++++ .+.+++++||+
T Consensus 76 vinatg~v~~tNlg~------s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--ae~alvv~sg~ 147 (454)
T TIGR00474 76 VINATGVVLHTNLGR------APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--AEDALVVNNNA 147 (454)
T ss_pred eeCCCCcEEeccCCC------CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--CCcEEEECCHH
Confidence 566667766665432 124799999999988764211 01 12233456788899999985 45677789999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcc--CCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhH
Q psy8199 325 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYH--GETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 402 (965)
Q Consensus 325 eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yH--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (965)
.|+..++... .++++||+.++.+. |.+.... ............++..+ .
T Consensus 148 aAi~l~l~~l---------~~GdeVIvs~~e~v~~ggs~~i~---------~~~~~~G~~~~~v~~~~---~-------- 198 (454)
T TIGR00474 148 AAVLLALNTL---------AKGKEVIVSRGELVEIGGSFRIP---------DVMEQSGAKLVEVGTTN---R-------- 198 (454)
T ss_pred HHHHHHHHHh---------CCcCEEEECCChhhhhcchhhHH---------HHHHHcCCEEEEeCCCC---C--------
Confidence 9998888543 35678888876642 2111000 00011111223332211 0
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccccC--CC--cccCChHHHHHHHHHHHhcCCeEEEeccccCCCccccc----
Q psy8199 403 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCA--GG--MIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF---- 474 (965)
Q Consensus 403 ~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~--~G--~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~---- 474 (965)
.+++++++++. +++++|+++. ..|. .| .+.+ +++|.++|++||+++|+|-. +|-.+..
T Consensus 199 ---~~l~dle~aI~---~~T~lv~~~h-~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~---sG~l~~~~~~g 264 (454)
T TIGR00474 199 ---THLKDYEDAIT---ENTALLLKVH-TSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLG---SGSLVDLSRYG 264 (454)
T ss_pred ---CCHHHHHHhcC---cCCEEEEEEc-cCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECC---Ccccccchhcc
Confidence 25788888875 4567777766 4443 35 3555 99999999999999999953 3322221
Q ss_pred -----ccccccCCCcceeeec--cccCCCcccceeeeecHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhc
Q psy8199 475 -----FACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 547 (965)
Q Consensus 475 -----~~~~~~~~~pDivt~s--K~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~L~~~~~ 547 (965)
...+......|+++|| |.++|. ..|++++++++++.+.... + .-.+...-+..++..++|....+
T Consensus 265 l~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~----l--~r~lr~~k~~la~l~~~l~~~~~ 336 (454)
T TIGR00474 265 LPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNP----L--TRALRVDKLTLAALEATLRLYLD 336 (454)
T ss_pred CCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhch----h--HHHHhhChHHHHHHHHHHHHHhC
Confidence 1112233458999999 988774 3678889998887665411 1 11112233344444455543221
Q ss_pred cc--H------------HHHHHHHHHHHHHHHHcccCCCce--eeeec-----eeEE-------EEEEEeecCccchhhH
Q psy8199 548 DN--I------------LQRISQDMKKITKALTSLITHPKI--INFRQ-----KGMI-------WAFDVIIEDPEQIETF 599 (965)
Q Consensus 548 ~~--~------------~~~~~~~~~~l~~~L~~l~~~~~i--~~v~g-----~G~~-------~~i~~~~~~~~~~~~~ 599 (965)
+. + .++..++..++.+.|++... +++ ..+.. -|.| +.+.+. .. .-.
T Consensus 337 ~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~-~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~-~~----~~~ 410 (454)
T TIGR00474 337 PEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALG-PGFELEIVPGLSQVGGGSLPDERLPSYAVTLT-PD----GLS 410 (454)
T ss_pred chhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhcc-CCceEEEEEcCCcccCCCCcCCCCCeEEEEEe-cC----CCC
Confidence 11 1 23555667777777755311 111 11111 1221 233332 11 111
Q ss_pred HHHHHHHHHHcC--cEEeecCCEEEEeCCcccCHHHHHHHHHhh
Q psy8199 600 SKKFFVAALKNE--LLLRPIGNTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 600 ~~~~~~~l~~~G--i~~~~~~~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
+..+.++|++.. |+.+...+.+.+-+ .++.+++++.+++++
T Consensus 411 ~~~l~~~lr~~~~~ii~r~~~~~~~ld~-r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 411 AEKLEARLRELPPPIIGRIEDDRFLLDL-RTLLEDEEELLIEAL 453 (454)
T ss_pred HHHHHHHHhcCCCCEEEEEECCEEEEEe-CcCCHHHHHHHHHHh
Confidence 346777777554 77776667787875 477788888877764
No 459
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.25 E-value=4.8e-11 Score=129.81 Aligned_cols=231 Identities=12% Similarity=0.096 Sum_probs=134.6
Q ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEE-cCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 293 NLTHKPVIKLSEKLSSLTQYKLGHCFY-GSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 293 ~~~~~~~~~la~~l~~~~~~~~~~v~~-~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
..+.....++.+.+++.++ .++++| ++|+++|+..++..+. .++++|++..++|... ..++...|.
T Consensus 55 ~~~~g~i~~~~~~~A~~~g--a~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h~s~-~~~~~~~g~-- 121 (294)
T cd00615 55 LDPTGPIKEAQELAARAFG--AKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCHKSV-INGLVLSGA-- 121 (294)
T ss_pred CCCChHHHHHHHHHHHHhC--CCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCchHHH-HHHHHHCCC--
Confidence 3456667788888899885 455665 8888999999887663 2567788877665333 333333221
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
...+++.+..... +. ....|++++++++++.++..++++++| +.+|.+.+ +++|.++
T Consensus 122 ----------~~~~v~~~~~~~~--~~----~~~i~~~~l~~~l~~~~~~k~v~l~~p---~~~G~~~d----l~~I~~~ 178 (294)
T cd00615 122 ----------VPVYLKPERNPYY--GI----AGGIPPETFKKALIEHPDAKAAVITNP---TYYGICYN----LRKIVEE 178 (294)
T ss_pred ----------EEEEecCccCccc--Cc----CCCCCHHHHHHHHHhCCCceEEEEECC---CCCCEecC----HHHHHHH
Confidence 1222222110000 00 001367889988875433344555555 46788876 8999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceee--eccccCCCcccceeee-ecHHHH--HhhhccCCcccccccC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVM-TTDKIY--NSIYYKNNINIFLHSH 526 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~gG~~pig~v~-~~~~i~--~~~~~~~~~~~~~~~~ 526 (965)
|++||+++|+||+|......+..+.........|+++ ++|.++| ++.|+++ .+.+.. +.+.. .+....
T Consensus 179 ~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g--~~~~~~l~~~~~~~~~~~~~~-----~~~~~~ 251 (294)
T cd00615 179 AHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTLPA--LTQGSMIHVKGDLVNPDRVNE-----ALNLHQ 251 (294)
T ss_pred HHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEchhcccch--HhHHHHHHhCCCcCCHHHHHH-----HHHHHC
Confidence 9999999999999864211111111112223467774 5798755 4554433 333321 11211 111123
Q ss_pred CCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHH
Q psy8199 527 SYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKALT 566 (965)
Q Consensus 527 t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~~~L~ 566 (965)
|.+.+.+.+++..++++.+.. +++.+++.++.+++++.|+
T Consensus 252 ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 252 STSPSYLILASLDVARAMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 445566677777777776643 3467777777888877764
No 460
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.25 E-value=4.4e-10 Score=125.06 Aligned_cols=241 Identities=13% Similarity=0.118 Sum_probs=158.0
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
+++..++....|+++|+++- +.+.+++++||+.|+.+++.... .++++||+.+..|++......
T Consensus 56 YsR~~nPt~~~le~~la~LE--g~~~a~~~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~------ 119 (395)
T PRK08114 56 YGRRGTLTHFSLQEAMCELE--GGAGCALYPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCS------ 119 (395)
T ss_pred ccCCCChhHHHHHHHHHHHh--CCCeEEEEhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHH------
Confidence 45677888999999999987 45788889999999999887553 256788888877766522110
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
.........+.+++. .|.++++++++ +++.+|++|. +.|+.|.+.+ +++|.+
T Consensus 120 ---~~l~~~Gi~v~~vd~-----------------~d~~~l~~~l~---~~TrlV~~Et-psNp~~~v~D----I~~Ia~ 171 (395)
T PRK08114 120 ---KILSKLGVTTTWFDP-----------------LIGADIAKLIQ---PNTKVVFLES-PGSITMEVHD----VPAIVA 171 (395)
T ss_pred ---HHHHhcCcEEEEECC-----------------CCHHHHHHhcC---CCceEEEEEC-CCCCCCEeec----HHHHHH
Confidence 011111223344332 25677888885 4578999999 9999999998 999999
Q ss_pred HHHhcC--CeEEEeccccCCCcccccccccccCCCcceeee--ccccCCCc-ccceeeeecHHHHHhhhccCCccccccc
Q psy8199 451 ICNNYN--IHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGY-LPLSLVMTTDKIYNSIYYKNNINIFLHS 525 (965)
Q Consensus 451 l~~~~g--~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~--sK~l~gG~-~pig~v~~~~~i~~~~~~~~~~~~~~~~ 525 (965)
+|+++| +++|+|.+++. +. .++-.....|+++. .|.++|.. .-.|+++.++++++.+... . ...|
T Consensus 172 ia~~~g~g~~lvVDnT~a~----p~--~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~---~-~~~G 241 (395)
T PRK08114 172 AVRSVNPDAVIMIDNTWAA----GV--LFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN---S-YLMG 241 (395)
T ss_pred HHHHhCCCCEEEEECCCcc----cc--ccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH---H-Hhcc
Confidence 999985 99999999852 21 24444556898875 58887731 3456666777766655420 0 1122
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCcee----------eeeceeEEEEEEEe
Q psy8199 526 HSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVI 589 (965)
Q Consensus 526 ~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~----------~v~g~G~~~~i~~~ 589 (965)
. ..+|..+...+..|+.+.- -.++-.++...+.+.|++.. .+|++. ...|-|.|+.|++.
T Consensus 242 ~--~~~p~~a~l~~rgl~TL~l--R~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK08114 242 Q--MVDADTAYMTSRGLRTLGV--RLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLK 316 (395)
T ss_pred C--CCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEec
Confidence 2 3467777766666654431 24555666667777776432 233322 12467889999985
No 461
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.24 E-value=1.1e-09 Score=123.11 Aligned_cols=283 Identities=17% Similarity=0.147 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEE
Q psy8199 273 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 352 (965)
Q Consensus 273 p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~ 352 (965)
.+..+++.+.++.. +. ....+...++++++++.+ +..+++.++||+.|+.+|++++-- .++++||+.
T Consensus 5 ~e~~~~v~~~l~s~-~~---~~~g~~~~~fE~~~a~~~--g~~~~~~~~sgt~Al~~al~~l~~-------~~gdeVi~p 71 (363)
T PF01041_consen 5 EEEIDAVLEVLRSG-WL---STYGPYVEEFEKEFAEYF--GVKYAVAVSSGTSALHLALRALGL-------GPGDEVIVP 71 (363)
T ss_dssp HHHHHHHHHHHHHT-CC---SSSSHHHHHHHHHHHHHH--TSSEEEEESSHHHHHHHHHHHTTG-------GTTSEEEEE
T ss_pred HHHHHHHHHHHHhC-Cc---cCCCHHHHHHHHHHHHHh--CCCeEEEeCChhHHHHHHHHhcCC-------CcCceEecC
Confidence 45566777777664 21 122578899999999999 578999999999999999997522 467899999
Q ss_pred cCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccc
Q psy8199 353 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQ 432 (965)
Q Consensus 353 ~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~ 432 (965)
.-+|.+.......++. ..+++........ .|++++++++. +++.+|++-.
T Consensus 72 ~~t~~~~~~ai~~~G~-------------~pv~~Di~~~~~~-----------id~~~~~~~i~---~~t~ai~~~h--- 121 (363)
T PF01041_consen 72 AYTFPATASAILWAGA-------------EPVFVDIDPETLN-----------IDPEALEKAIT---PKTKAILVVH--- 121 (363)
T ss_dssp SSS-THHHHHHHHTT--------------EEEEE-BETTTSS-----------B-HHHHHHHHH---TTEEEEEEE----
T ss_pred CCcchHHHHHHHHhcc-------------EEEEEeccCCcCC-----------cCHHHHHHHhc---cCccEEEEec---
Confidence 8888776544444443 2233333212222 38899999996 3456666633
Q ss_pred cCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec----cccCCCcccceeeeec-H
Q psy8199 433 CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTT-D 507 (965)
Q Consensus 433 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s----K~l~gG~~pig~v~~~-~ 507 (965)
.-|.... +.+|.++|+++|+.||-|-+|+ +|-. +.-...|-.-|+.+|| |.++.| --|+++.+ +
T Consensus 122 -~~G~~~d----~~~i~~~~~~~~i~lIeD~a~a-~g~~---~~g~~~G~~gd~~~fSf~~~K~i~~g--eGG~v~~~~~ 190 (363)
T PF01041_consen 122 -LFGNPAD----MDAIRAIARKHGIPLIEDAAQA-FGAR---YKGRPVGSFGDIAIFSFHPTKIITTG--EGGAVVTNDP 190 (363)
T ss_dssp -GGGB-------HHHHHHHHHHTT-EEEEE-TTT-TT-E---ETTEETTSSSSEEEEESSTTSSS-SS--S-EEEEESTH
T ss_pred -CCCCccc----HHHHHHHHHHcCCcEEEccccc-cCce---eCCEeccCCCCceEecCCCCCCCcCC--CCeeEEecHH
Confidence 3344443 9999999999999999999997 5421 1112223344888876 887654 23677775 4
Q ss_pred HHHHhhh---ccCCc----cccc----ccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceee
Q psy8199 508 KIYNSIY---YKNNI----NIFL----HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN 576 (965)
Q Consensus 508 ~i~~~~~---~~~~~----~~~~----~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~ 576 (965)
++.+.+. ..+.. ..+. .+..+..+++.++.+++-|+.+. ...++-+++.+++.+.|..+ +++..
T Consensus 191 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~--~~~~~R~~~a~~y~~~L~~~---~~~~~ 265 (363)
T PF01041_consen 191 ELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLD--EIIARRRENAQRYREALAGI---PGIKP 265 (363)
T ss_dssp HHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHTTG---TTEEE
T ss_pred HHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhcC---CCccc
Confidence 4544443 21111 1111 23445677888888888887654 34566677788888888765 33211
Q ss_pred ---eece--eEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEee
Q psy8199 577 ---FRQK--GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP 616 (965)
Q Consensus 577 ---v~g~--G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 616 (965)
.... ...+.+.+...+... ...+.+.+.|.++||-..+
T Consensus 266 ~~~~~~~~~~~~~~f~i~~~~~~~--~~rd~l~~~L~~~GI~~~~ 308 (363)
T PF01041_consen 266 PPIPDGAERSSYYRFPIRLPDEAL--ADRDELVEALRARGIETRP 308 (363)
T ss_dssp EGCGTTTEEBCESSEEEEETCCGC--STHHHHHHHHHHTTBEEBC
T ss_pred cccccccccccccccccccccccc--chHHHHHHHHHHCCCcccc
Confidence 1111 233333332122110 1255788999999998765
No 462
>PRK05939 hypothetical protein; Provisional
Probab=99.24 E-value=7.6e-10 Score=124.73 Aligned_cols=165 Identities=11% Similarity=0.121 Sum_probs=113.6
Q ss_pred cCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCc
Q psy8199 291 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 370 (965)
Q Consensus 291 ~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~ 370 (965)
+.+..++...+|+++++++.+ .+..+.++||+.|+..++....+ ++++||+.+..|.+.......
T Consensus 41 Y~r~g~p~~~~lE~~la~leg--~~~~v~~ssG~~Ai~~~l~all~--------~Gd~Vv~~~~~y~~t~~~~~~----- 105 (397)
T PRK05939 41 YARQGTPTTAALEAKITKMEG--GVGTVCFATGMAAIAAVFLTLLR--------AGDHLVSSQFLFGNTNSLFGT----- 105 (397)
T ss_pred cCCCCCHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHHcC--------CCCEEEECCCccccHHHHHHH-----
Confidence 345567888999999999985 45677778899999999876532 567899888777554211000
Q ss_pred CccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHH
Q psy8199 371 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 450 (965)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~ 450 (965)
.......+.+++. .|++++++++. +++.+|++|. ++|++|.+.+ +++|.+
T Consensus 106 -----l~~~G~~v~~v~~-----------------~d~e~l~~~l~---~~tklV~ves-p~NptG~v~d----l~~I~~ 155 (397)
T PRK05939 106 -----LRGLGVEVTMVDA-----------------TDVQNVAAAIR---PNTRMVFVET-IANPGTQVAD----LAGIGA 155 (397)
T ss_pred -----HHhcCCEEEEECC-----------------CCHHHHHHhCC---CCCeEEEEEC-CCCCCCCHHh----HHHHHH
Confidence 0011123344433 25788888874 4577888888 8999998866 999999
Q ss_pred HHHhcCCeEEEeccccCCCcccccccccccCCCccee--eeccccCCCcccceeeeec
Q psy8199 451 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTT 506 (965)
Q Consensus 451 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDiv--t~sK~l~gG~~pig~v~~~ 506 (965)
+|+++|+++|+|++|.... .++-.....|++ +++|.++|....+|+++..
T Consensus 156 la~~~gi~livD~t~a~~~------~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 156 LCRERGLLYVVDNTMTSPW------LFRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred HHHHcCCEEEEECCccccc------ccCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 9999999999999985211 122222346776 5789998733677776663
No 463
>PRK14455 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.23 E-value=1e-09 Score=120.44 Aligned_cols=188 Identities=11% Similarity=0.200 Sum_probs=137.6
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH------CCCCEEEEeeccCCCCcccHHHHHHHHHHHHh-
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS------DGATRFCMGAAWRELKDRDLDNIENMICEVKK- 761 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~------~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~- 761 (965)
..||+.+|.||...... ..+.++++||++++..... .|+..|.+.|++.|+.. .+.+.++++.+++
T Consensus 116 qvGC~~~C~FC~t~~~~-----~~r~lt~~EIv~qv~~~~~~~~~~g~~v~~Vv~~GmGEPLln--~~~v~~~l~~l~~~ 188 (356)
T PRK14455 116 QVGCRIGCTFCASTLGG-----LKRDLEAGEIVAQVMLVQKYLDETEERVSHIVVMGIGEPFDN--YDNVMDFLRIINDD 188 (356)
T ss_pred CCCCCCCCCcCCCCCCC-----CCccCCHHHHHHHHHHHHHHHhhcCCCcceEEEeccccccCC--HHHHHHHHHHHhcc
Confidence 68999999999865421 2446899999998875322 35788899897778554 6889999999986
Q ss_pred cCc-----EeEEe-cCCCCHHHHHHHHHhCCC-eEeccCCC-CHHHHhcccC---CCCHHHHHHHHHHHHH-cCCcee--
Q psy8199 762 IGL-----ETCLT-LGMLNENQAYRLKKVGLD-YYNHNLDT-SPKLYGDIIS---TRDYENRLNTLKNVRN-VGINIC-- 827 (965)
Q Consensus 762 ~~~-----~i~~~-~~~~~~e~l~~Lk~aG~~-~i~i~~es-~~~~~~~i~~---~~~~~~~~~~i~~~~~-~Gi~v~-- 827 (965)
.++ +++++ .|.. + .+..|.+.++. .+.+++.+ +++.++++.+ ..+.++.+++++.+.+ .+.++.
T Consensus 189 ~g~~~s~r~itvsT~G~~-~-~i~~l~d~~l~~~LaiSL~a~~~e~r~~l~pi~~~~~l~~Il~~l~~~~~~~~~~v~ie 266 (356)
T PRK14455 189 KGLAIGARHITVSTSGIA-P-KIYDFADEGLQINLAISLHAPNNELRSSLMPINRAYPLEKLMEAIEYYIEKTNRRVTFE 266 (356)
T ss_pred cCcccCCCceEEEecCch-H-hHHHHHhcccCeeEEeccCCCCHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCeEEEE
Confidence 465 44453 3443 3 45566676643 35689999 9999997654 5678999999997765 555555
Q ss_pred eeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 828 CGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 828 ~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
.-+|=|.+++.+++.+.+++++.++ ..|.+.+|.|.++.++ .+++.+++.+...+++.
T Consensus 267 y~lI~gvNDs~ed~~~La~ll~~l~---~~VnLIPynp~~~~ky---~~ps~e~l~~f~~~L~~ 324 (356)
T PRK14455 267 YILLGGVNDQVEHAEELADLLKGIK---CHVNLIPVNPVPERDY---VRTPKEDIFAFEDTLKK 324 (356)
T ss_pred EEEeCCCCCCHHHHHHHHHHHhcCC---CcEEEEecCcCCCCCC---cCCCHHHHHHHHHHHHH
Confidence 4555567899999999999999986 5688888888877654 34577777777666654
No 464
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.23 E-value=6.6e-10 Score=126.27 Aligned_cols=246 Identities=15% Similarity=0.175 Sum_probs=149.1
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
++..++...+++++++++.+ .+.+++++||++|+..++.... .++++||+.+..|++.......
T Consensus 59 ~R~~~p~~~~le~~lA~l~g--~~~av~~sSGt~Al~~al~~ll--------~~Gd~Vi~~~~~y~~t~~~~~~------ 122 (433)
T PRK08134 59 SRISNPTVAVLEERVAALEG--GVGAIATASGQAALHLAIATLM--------GAGSHIVASSALYGGSHNLLHY------ 122 (433)
T ss_pred ecCcChHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEeCCccHHHHHHHHH------
Confidence 45567788999999999985 3468999999999999988653 2567899988888764211100
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
........+.+++. .|+++++++|. +++.+|++|. +.|++|.+.+ +++|.++
T Consensus 123 ---~l~~~Gi~v~~vd~-----------------~d~~~l~~~i~---~~TklV~~e~-~~np~g~v~D----i~~I~~l 174 (433)
T PRK08134 123 ---TLRRFGIETTFVKP-----------------GDIDGWRAAIR---PNTRLLFGET-LGNPGLEVLD----IPTVAAI 174 (433)
T ss_pred ---HHhhCCeEEEEECC-----------------CCHHHHHHhcC---CCCeEEEEEC-CCcccCcccC----HHHHHHH
Confidence 00011123344432 26788888885 4578889998 7899999888 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceeeec--cccCCCcccceeeeec-HHH-------HHhhhccC-Cc-
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT-DKI-------YNSIYYKN-NI- 519 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~gG~~pig~v~~~-~~i-------~~~~~~~~-~~- 519 (965)
|++||+++|+|.+|. .+.. ..-.....|++++| |.++|-.--+|.++.. ... ...+...- ..
T Consensus 175 a~~~gi~livD~t~a-~~~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (433)
T PRK08134 175 AHEAGVPLLVDSTFT-TPYL-----LRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFH 248 (433)
T ss_pred HHHcCCEEEEECCCc-cccc-----CCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCccccc
Confidence 999999999999985 2211 11123457888765 7676521234444331 110 00000000 00
Q ss_pred ----------cc--------ccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCceee
Q psy8199 520 ----------NI--------FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKIIN 576 (965)
Q Consensus 520 ----------~~--------~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~i~~ 576 (965)
.. .........+|..++..+..|+.+. ...++-.++..++.+.|++.. .+|++..
T Consensus 249 g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~--~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~ 326 (433)
T PRK08134 249 GMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLP--LRMERHVANTRKVVAFLASHPAVARVAHPELES 326 (433)
T ss_pred ccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 00 0011112346666666666665443 235566667777777776542 2344321
Q ss_pred ----------e-eceeEEEEEEEe
Q psy8199 577 ----------F-RQKGMIWAFDVI 589 (965)
Q Consensus 577 ----------v-~g~G~~~~i~~~ 589 (965)
. .|-|.|+.|++.
T Consensus 327 ~p~~~~~~~~~~~g~gg~~s~~l~ 350 (433)
T PRK08134 327 HPDHALAKRLLPRGAGSVFSFDLK 350 (433)
T ss_pred CccHHHHHHhCCCCCceEEEEEec
Confidence 1 467889999985
No 465
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.22 E-value=3.8e-09 Score=129.90 Aligned_cols=352 Identities=14% Similarity=0.115 Sum_probs=195.9
Q ss_pred cccccccccchhccCCCCCHHHHHH-HHHHHhhc-ccccc----CCCCcHHHHHHHHHHHhhcCCCCC--eEEEcCChhH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKA-LKNQLNKL-EHVML----SNLTHKPVIKLSEKLSSLTQYKLG--HCFYGSDGAS 325 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~a-v~~~~~~~-~~~~~----~~~~~~~~~~la~~l~~~~~~~~~--~v~~~~sGse 325 (965)
..|||..++.. -.|..+++ +.+.+... ...+. +....+..++..++++++++...+ .|+||+|+|+
T Consensus 35 ~iYLD~Aatt~------~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATL------YSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCC------CCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 58999877633 24444444 44444432 11110 112344567778889999986554 5899999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHH
Q psy8199 326 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 405 (965)
Q Consensus 326 A~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (965)
|+..+..... + .++++||+. ...|.+......... .....+..++.+........... .. .
T Consensus 109 alnlva~~l~-~------~~gd~Iv~t-~~eH~svl~~~~~a~---------~~G~~v~~v~~~~~~~~~~~~~g-~~-~ 169 (805)
T PLN02724 109 ALKLVGETFP-W------SSESHFCYT-LENHNSVLGIREYAL---------EKGAAAIAVDIEEAANQPTNSQG-SV-V 169 (805)
T ss_pred HHHHHHHHCC-C------CCCCeEEEe-eccccchHHHHHHHH---------HcCCeEEeccchhcccccccccc-cc-c
Confidence 9998865431 1 245666664 455655332211100 00112333333210000000000 00 0
Q ss_pred HHHHHHHHHHH----h---CCCcEEEEEEccccccCCCcccCChHHHHHHHHHHHhc--------CCeEEEeccccCCCc
Q psy8199 406 CAIFDLEILLK----K---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY--------NIHLIADEIAVGCGR 470 (965)
Q Consensus 406 ~d~~~le~~l~----~---~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~--------g~llI~DEv~tg~gr 470 (965)
.+.++|++.+. . ..+++..|.+.- +.|.+|.+.| ++.+..+++.. ++++++|-+|+ +|.
T Consensus 170 ~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~-vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g~ 243 (805)
T PLN02724 170 VKSRGLQRRNTSKLQKREDDGEAYNLFAFPS-ECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CGT 243 (805)
T ss_pred cchhhhhhhhhhhhccccccCCCcceEEEEc-cccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cCC
Confidence 01134554431 1 123445666766 8899999998 66565555432 36899999996 543
Q ss_pred ccccccccccCCCcceeeec--cccCCCcccceeeeecHHHHHhhhc---cCCccc-----------------ccccCCC
Q psy8199 471 TGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYY---KNNINI-----------------FLHSHSY 528 (965)
Q Consensus 471 ~G~~~~~~~~~~~pDivt~s--K~l~gG~~pig~v~~~~~i~~~~~~---~~~~~~-----------------~~~~~t~ 528 (965)
. ..+...+.+|+++|| |.++ |...+|++++++++.+.+.. ++.... ..-.+
T Consensus 244 ~----piDv~~~~~Dfl~~S~HK~~G-gP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~G-- 316 (805)
T PLN02724 244 S----PPDLSRYPADFVVVSFYKIFG-YPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDG-- 316 (805)
T ss_pred C----CCChhhcCCCEEEEecceecc-CCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCC--
Confidence 2 333334568999987 6554 33458999999887765532 111100 00111
Q ss_pred CCCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHcccC---CCceeee---------eceeEEEEEEEeecCc
Q psy8199 529 SGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLIT---HPKIINF---------RQKGMIWAFDVIIEDP 593 (965)
Q Consensus 529 ~~~~~~~aaa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~l~~---~~~i~~v---------~g~G~~~~i~~~~~~~ 593 (965)
+.|.+++++..++|+.+.+ +.+.++.+.+.+++.+.|.++.. .|++... ..++.+++|.+...++
T Consensus 317 T~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~ 396 (805)
T PLN02724 317 TISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADG 396 (805)
T ss_pred CcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCC
Confidence 2456677777778877654 45678888899999999987732 1233211 1356678887752221
Q ss_pred cchhhHHHHHHHHHHHcCcEEeec----------------------------------------CCEEEEeCCcccCHHH
Q psy8199 594 EQIETFSKKFFVAALKNELLLRPI----------------------------------------GNTVYLMPPYILNKNE 633 (965)
Q Consensus 594 ~~~~~~~~~~~~~l~~~Gi~~~~~----------------------------------------~~~lR~~p~~~~t~~~ 633 (965)
..- . ...+...+.++||.++.+ .+++|+|..+..|.+|
T Consensus 397 ~~v-~-~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eD 474 (805)
T PLN02724 397 SWV-G-HREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFED 474 (805)
T ss_pred CEe-C-HHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHH
Confidence 111 0 112333334567766420 1679999999999999
Q ss_pred HHHHHHhhhccc
Q psy8199 634 IQHMTSAIFQTF 645 (965)
Q Consensus 634 i~~~~~~l~~~~ 645 (965)
++.+++.+.+..
T Consensus 475 vd~lv~~l~~~~ 486 (805)
T PLN02724 475 CQKFIDFIISSF 486 (805)
T ss_pred HHHHHHHHHHHh
Confidence 999999988744
No 466
>TIGR00238 KamA family protein. Note that the E. coli homolog was expressed in E. coli and purified and found not to display display lysine 2,3-aminomutase activity. Active site residues are found in 100 residue extension in B. subtilis. Name changed to KamA family protein.
Probab=99.21 E-value=7.3e-10 Score=120.93 Aligned_cols=192 Identities=14% Similarity=0.164 Sum_probs=138.9
Q ss_pred eEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC-CCCEEEEeeccCCCCcccHHHHHHHHHHHHh-
Q psy8199 684 LLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD-GATRFCMGAAWRELKDRDLDNIENMICEVKK- 761 (965)
Q Consensus 684 ~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~-g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~- 761 (965)
.+.+ |++|+.+|.||..+...... ...+.+++.+.+..+.+. |+++|.|+||+ |+.. +-+.+.++++.+++
T Consensus 116 ll~~-T~gCn~~C~yC~~~~~~~~~----~~~~~~~~~~~i~~i~~~~~i~eV~lsGGD-PLl~-~d~~L~~ll~~L~~i 188 (331)
T TIGR00238 116 LFLV-KGGCAVNCRYCFRRHFPYKE----NPGNKKKWQKALDYIAEHPEIIEILISGGD-PLMA-KDHELEWLLKRLEEI 188 (331)
T ss_pred EEEe-CCCCCCCCcCCCCCCcCCCC----CCccHHHHHHHHHHHHhCCCcCEEEEECCc-cccC-CHHHHHHHHHHHHhc
Confidence 4555 99999999999754321111 112357777777776654 89999998875 5443 22345666666655
Q ss_pred ---cCcEeEEec-----CCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCcee--eeE
Q psy8199 762 ---IGLETCLTL-----GMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINIC--CGG 830 (965)
Q Consensus 762 ---~~~~i~~~~-----~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~--~~~ 830 (965)
..+.+.++. ..++++.++.|+++|+..+.+.... .+++ .+...++++.++++|+.+. +.+
T Consensus 189 ~~~~~IRi~tr~~~~~P~rit~el~~~L~~~~~~~~~vsh~nh~~Ei---------~~~~~~ai~~L~~aGi~v~~qtvL 259 (331)
T TIGR00238 189 PHLVRLRIGTRLPVVIPQRITDELCELLASFELQLMLVTHINHCNEI---------TEEFAEAMKKLRTVNVTLLNQSVL 259 (331)
T ss_pred CCccEEEeecCCCccCchhcCHHHHHHHHhcCCcEEEEccCCChHhC---------CHHHHHHHHHHHHcCCEEEeecce
Confidence 245554432 3369999999999999988888766 3332 2678899999999999776 445
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q psy8199 831 IIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTS 896 (965)
Q Consensus 831 i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~ 896 (965)
+-|..++.+++.++.+.+.+++ +.-..++.+.|..|+ .+-..+.++..+++..+|-.++..
T Consensus 260 l~gvnD~~~~l~~L~~~l~~~g--V~pyyl~~~~~~~g~---~~f~~~~~~~~~i~~~l~~~~sG~ 320 (331)
T TIGR00238 260 LRGVNDRAQILAKLSIALFKVG--IIPYYLHYLDKVQGA---KHFLVPDAEAAQIVKELARLTSGY 320 (331)
T ss_pred ECCcCCCHHHHHHHHHHHhhcC--eecCeecCcCCCCCc---ccccCCHHHHHHHHHHHHhcCCCC
Confidence 5555688999999999999998 777777888888887 334578999999999999888764
No 467
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.20 E-value=9.6e-10 Score=122.15 Aligned_cols=240 Identities=15% Similarity=0.202 Sum_probs=151.7
Q ss_pred cccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccC
Q psy8199 289 VMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTN 368 (965)
Q Consensus 289 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~ 368 (965)
+.++++.++....|+++|+++.+ -+.++.++||..|+.+++..... .+++|++.+..|+|.....
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~--g~~a~~~~SGmaAi~~~l~~ll~--------~Gd~iv~~~~~Y~~t~~~~----- 111 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEG--GEDALLFSSGMAAISAALLALLK--------PGDHIVASDDLYGGTYRLL----- 111 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS---------TTBEEEEESSSSHHHHHHH-----
T ss_pred cceeccccccHHHHHHHHHHhhc--ccceeeccchHHHHHHHHHhhcc--------cCCceEecCCccCcchhhh-----
Confidence 44567788999999999999984 47899999999999999886654 4688999999998862111
Q ss_pred CcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHH
Q psy8199 369 IQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLV 448 (965)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l 448 (965)
..........+.++.. .|+++++++++ +++.+|++|+ +.|+...+++ +++|
T Consensus 112 ----~~~l~~~gv~v~~~d~-----------------~d~~~l~~~l~---~~t~~v~~Es-psNP~l~v~D----l~~i 162 (386)
T PF01053_consen 112 ----EELLPRFGVEVTFVDP-----------------TDLEALEAALR---PNTKLVFLES-PSNPTLEVPD----LEAI 162 (386)
T ss_dssp ----HHCHHHTTSEEEEEST-----------------TSHHHHHHHHC---TTEEEEEEES-SBTTTTB-------HHHH
T ss_pred ----hhhhcccCcEEEEeCc-----------------hhHHHHHhhcc---ccceEEEEEc-CCCccccccc----HHHH
Confidence 1111122223444432 37899999985 4799999999 8888877776 9999
Q ss_pred HHHHHhcC-CeEEEeccccCCCcccccccccccCCCcceee--eccccCC-Ccccceeeeec--HHHHHhhhccCCcccc
Q psy8199 449 REICNNYN-IHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITG-GYLPLSLVMTT--DKIYNSIYYKNNINIF 522 (965)
Q Consensus 449 ~~l~~~~g-~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt--~sK~l~g-G~~pig~v~~~--~~i~~~~~~~~~~~~~ 522 (965)
+++|+++| +++|+|...... ..+.-+....|+++ .+|-++| |=.-.|+++++ +++++.+... ..
T Consensus 163 ~~~a~~~g~~~~vVDnT~atp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~----~~ 232 (386)
T PF01053_consen 163 AKLAKEHGDILVVVDNTFATP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREF----RR 232 (386)
T ss_dssp HHHHHHTTT-EEEEECTTTHT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHH----HH
T ss_pred HHHHHHhCCceEEeeccccce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcch----hh
Confidence 99999998 999999976321 22333334478875 5688876 22335666654 4676655431 01
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccCCCceee------------------eeceeEEE
Q psy8199 523 LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN------------------FRQKGMIW 584 (965)
Q Consensus 523 ~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~------------------v~g~G~~~ 584 (965)
..|.+ .+|..+...+..|+.+.- ..++..++...+.+.|++- |.|.. ..|-|.++
T Consensus 233 ~~G~~--~~p~da~ll~rgl~Tl~~--R~~~~~~nA~~lA~~L~~h---p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~ 305 (386)
T PF01053_consen 233 LLGAT--LSPFDAWLLLRGLRTLPL--RMERQNENAEALAEFLEEH---PKVKRVYYPGLPSHPQHELAKRQMSGGGGLL 305 (386)
T ss_dssp HHT-B----HHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTS---TTEEEEEETTSTTSTTHHHHHHHCSSCTSEE
T ss_pred hcCcc--chHHHHHHHhcCCCcHHH--HHHHHHHHHHHHHHHHHhC---CCCCeEEEcccccccceeeeeecccccCcee
Confidence 12222 356666655555544321 2555666777777777543 33332 23666799
Q ss_pred EEEEe
Q psy8199 585 AFDVI 589 (965)
Q Consensus 585 ~i~~~ 589 (965)
+|++.
T Consensus 306 sf~l~ 310 (386)
T PF01053_consen 306 SFELK 310 (386)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 99996
No 468
>COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only]
Probab=99.20 E-value=2.1e-10 Score=114.48 Aligned_cols=193 Identities=12% Similarity=0.164 Sum_probs=142.7
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC-CCCEEEEeeccCCCCcccHHHHHHHHHHHHh-cCcEe
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD-GATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLET 766 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~-g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~-~~~~i 766 (965)
||.|-++|.||-.+.. ...++.+ ++++||++.-....+. -+..+++.+|--..+++..|...+.++.++- .+..-
T Consensus 61 TN~CiyDC~YCINr~s--~~~pra~-ftp~Eiv~ltlnfYrRnYIeGLFLSSGvi~~~DyTmE~mi~var~LRle~~f~G 137 (404)
T COG4277 61 TNFCIYDCAYCINRSS--NDTPRAR-FTPEEIVDLTLNFYRRNYIEGLFLSSGVIKNPDYTMEEMIEVARILRLEHKFRG 137 (404)
T ss_pred hhhHHHhhHHHhcccc--CCCcccc-cCHHHHHHHHHHHHHHhhhhhheeccccccCcchHHHHHHHHHHHHhhccccCc
Confidence 8999999999986542 3344566 8999999997766655 5778888888766677888999999888873 33333
Q ss_pred EEecCCCCHHHHHHHHHhC--CCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHH---------------cCC-c--
Q psy8199 767 CLTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRN---------------VGI-N-- 825 (965)
Q Consensus 767 ~~~~~~~~~e~l~~Lk~aG--~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~---------------~Gi-~-- 825 (965)
.++...+....-+..+++| +|++++++|. .++.++.+-+.+.+.+.++.+..++. -.+ +
T Consensus 138 YIHlK~IPgas~~li~eaglyadRvSiNIElp~~~~lk~lap~K~p~dI~r~Mg~ir~~i~e~~e~~~r~r~tp~fapaG 217 (404)
T COG4277 138 YIHLKIIPGASPDLIKEAGLYADRVSINIELPTDDGLKLLAPEKDPTDILRSMGWIRLKILENAEDKRRKRHTPEFAPAG 217 (404)
T ss_pred EEEEEecCCCCHHHHHHHhhhhheeEEeEecCCcchhhhhCCCCChHHHHHHHHHHHHHHhhcccchhhhccCccccCCC
Confidence 4443333333444555677 6999999999 89999999999988888888777665 111 2
Q ss_pred eeeeEEEec-CCCHHHHHHHHHHHHh-cCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHH
Q psy8199 826 ICCGGIIGL-SESRDQRAELIFQLAN-LNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTI 886 (965)
Q Consensus 826 v~~~~i~Gl-~et~ed~~~~l~~l~~-l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~i 886 (965)
-++.+|+|- |||+++++..-..+.. .. ...|.++.|.|.|++|+.....++.....++.
T Consensus 218 QSTQmivGA~~~tD~~Ilsrs~~ly~~y~--lkRVyySaf~Pv~~s~~lp~~~pplmRehRLY 278 (404)
T COG4277 218 QSTQMIVGADGETDEDILSRSENLYGRYS--LKRVYYSAFSPVPSSPLLPDDKPPLMREHRLY 278 (404)
T ss_pred CceEEEEecCCCchHHHHHHHHHHhhccc--eeEEEeecccccCCCCCCcccCCchhHHHHHH
Confidence 347899999 8999999988887766 34 67889999999999998764444444434443
No 469
>PRK14463 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.20 E-value=1.9e-09 Score=117.84 Aligned_cols=188 Identities=16% Similarity=0.167 Sum_probs=135.1
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH-CCCCEEEEeeccCCCCcccHHHHHHHHHHHHh-cCc--
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS-DGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGL-- 764 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~-~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~-~~~-- 764 (965)
+.+|+.+|.||..... + ..+.++.+||++++..+.+ .+++.+.++|.+.|+. .++.+++.++.+++ .++
T Consensus 110 q~GC~~~C~FC~tg~~-~----~~r~lt~~EI~~qv~~~~~~~~i~~IvfmG~GEPl~--n~~~vi~~l~~l~~~~gl~~ 182 (349)
T PRK14463 110 QVGCAMGCAFCLTGTF-R----LTRNLTTAEIVNQVCAVKRDVPVRNIVFMGMGEPLA--NLDNVIPALQILTDPDGLQF 182 (349)
T ss_pred cCCcCCCCccCCCCCC-C----CCCCCCHHHHHHHHHHHHhcCCccEEEEecCCcchh--cHHHHHHHHHHhhcccccCc
Confidence 8999999999974431 1 1345899999999877654 3789999999666754 57888998888874 454
Q ss_pred ---EeEE-ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhccc---CCCCHHHHHHHHHHHHH-cCCcee--eeEEEe
Q psy8199 765 ---ETCL-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDII---STRDYENRLNTLKNVRN-VGINIC--CGGIIG 833 (965)
Q Consensus 765 ---~i~~-~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~---~~~~~~~~~~~i~~~~~-~Gi~v~--~~~i~G 833 (965)
.+.+ +.|. .+ .+..|.+..-..+.+++++ +++.++++. +..+.++.+++++...+ .+-++. ..+|-|
T Consensus 183 s~r~itVsTnGl-~~-~i~~l~~~~~~~LaiSL~a~~~e~r~~I~pink~~~l~~l~~a~~~~~~~~~~~v~ieyvLI~G 260 (349)
T PRK14463 183 STRKVTVSTSGL-VP-EMEELGREVTVNLAVSLNATTDEVRDRIMPVNRRYPLAELLAACKAFPLPGRRKITIEYVMIRG 260 (349)
T ss_pred CCceEEEECCCc-hH-HHHHHhhccCeEEEEeCCCCCHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCeEEEEEEEeCC
Confidence 4554 3343 33 3444444333345689999 999999984 45688888888877654 334554 456666
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 834 LSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 834 l~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
.+++.+++.+..++++.++ ..|.+.+|.|.+|. ..++++.+++.+...+++.
T Consensus 261 vNDs~e~~~~L~~ll~~l~---~~vnlIPyn~~~~~---~~~~ps~e~i~~f~~~L~~ 312 (349)
T PRK14463 261 LNDSLEDAKRLVRLLSDIP---SKVNLIPFNEHEGC---DFRSPTQEAIDRFHKYLLD 312 (349)
T ss_pred CCCCHHHHHHHHHHHhccC---ceEEEEecCCCCCC---CCCCCCHHHHHHHHHHHHH
Confidence 7899999999999999987 46777778777764 4466788887777766664
No 470
>PRK14459 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.19 E-value=2.3e-09 Score=116.66 Aligned_cols=192 Identities=14% Similarity=0.174 Sum_probs=140.0
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH---C--------CCCEEEEeeccCCCCcccHHHHHHHHH
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS---D--------GATRFCMGAAWRELKDRDLDNIENMIC 757 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~---~--------g~~~i~l~~g~~~~~~~~~~~~~~~~~ 757 (965)
..||+.+|.||+.... .-.+.++++||++++..+.+ . .++.|.|.|-++|+. .++.+.++++
T Consensus 128 QvGC~m~C~FCatg~~-----g~~RnLt~~EIv~Qv~~~~~~~~~~~~~~~~~~i~nVvfmGmGEPLl--N~d~V~~~i~ 200 (373)
T PRK14459 128 QAGCGMACPFCATGQG-----GLTRNLSTAEIVEQVRAAARALRDGEVPGGPGRLSNVVFMGMGEPLA--NYKRVVAAVR 200 (373)
T ss_pred cCCCCCcCCCCCCCCC-----CCCCccCHHHHHHHHHHHHHHhhhcccccCCCceeEEEEecCCcchh--hHHHHHHHHH
Confidence 6899999999985431 12345999999999976643 1 166788888455743 3788999999
Q ss_pred HHHh-----cCc---EeEEecCCCCHHHHHHHHHhCCC-eEeccCCC-CHHHHhcccCC---CCHHHHHHHHHHH-HHcC
Q psy8199 758 EVKK-----IGL---ETCLTLGMLNENQAYRLKKVGLD-YYNHNLDT-SPKLYGDIIST---RDYENRLNTLKNV-RNVG 823 (965)
Q Consensus 758 ~i~~-----~~~---~i~~~~~~~~~e~l~~Lk~aG~~-~i~i~~es-~~~~~~~i~~~---~~~~~~~~~i~~~-~~~G 823 (965)
.+++ .++ .++++.--+ ...+++|.+.+++ .+.+++.+ +++.++++.+. .+.++.+++++.. ++.|
T Consensus 201 ~l~~~~~~g~gis~r~ITvST~Gl-~~~i~~la~~~l~~~LavSLha~d~e~R~~l~p~n~~~~l~~ll~a~~~~~~~~g 279 (373)
T PRK14459 201 RITAPAPEGLGISARNVTVSTVGL-VPAIRKLADEGLPVTLAVSLHAPDDELRDELVPVNTRWKVDEVLDAARYYADATG 279 (373)
T ss_pred HHhCcccccCCccCCEEEEECcCc-hhHHHHHHHhcCCeEEEEEeCCCCHHHHHHhcCcccCCCHHHHHHHHHHHHHHhC
Confidence 8876 344 566644333 2467888888887 89999999 99999999873 6789999996664 4678
Q ss_pred Ccee--eeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 824 INIC--CGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 824 i~v~--~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
.++. .-+|=|.+++.++..+..++++.++.....|.+.+|.|.++.++ ..++.+.+.+...+.+.
T Consensus 280 rrv~ieyvLi~GvNDs~e~a~~L~~llk~~~~~~~~VNLIpyNp~~~~~y---~~~~~~~~~~F~~~L~~ 346 (373)
T PRK14459 280 RRVSIEYALIRDINDQPWRADLLGKKLHGRGGGWVHVNLIPLNPTPGSKW---TASPPEVEREFVRRLRA 346 (373)
T ss_pred CEEEEEEEEeCCCCCCHHHHHHHHHHHhhccCCCeEEEEEccCCCCCCCC---cCCCHHHHHHHHHHHHH
Confidence 7665 45555667999999999999999831125688888888887754 34566766666665553
No 471
>PRK14468 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.18 E-value=2.8e-09 Score=116.31 Aligned_cols=188 Identities=14% Similarity=0.164 Sum_probs=137.3
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC------CCCEEEEeeccCCCCcccHHHHHHHHHHHHh-
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD------GATRFCMGAAWRELKDRDLDNIENMICEVKK- 761 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~------g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~- 761 (965)
+.+|+.+|.||..... ...+.++.+||++++...... .++.|.|+|.++|+.. ++.+.+.++.+..
T Consensus 100 q~GC~l~C~fC~tg~~-----g~~r~Lt~~EI~~qv~~~~~~~g~~~~~i~~Vvf~GmGEPlln--~~~v~~~i~~l~~~ 172 (343)
T PRK14468 100 MVGCPAGCAFCATGAM-----GFGRNLTAAEILDQVLAVAGHEGISPREIRNVVLMGMGEPLLN--YENVLKAARIMLHP 172 (343)
T ss_pred cCCCCCcCCCCCCCCC-----CCCCCCCHHHHHHHHHHHHhhcCcCcCCccEEEEeccCccccC--HHHHHHHHHHhccc
Confidence 7899999999975432 123458999999998765443 2578889886667554 7888888888743
Q ss_pred cCc-----EeEE-ecCCCCHHHHHHHHHhCCC-eEeccCCC-CHHHHhcccC---CCCHHHHHHHHHH-HHHcCCcee--
Q psy8199 762 IGL-----ETCL-TLGMLNENQAYRLKKVGLD-YYNHNLDT-SPKLYGDIIS---TRDYENRLNTLKN-VRNVGINIC-- 827 (965)
Q Consensus 762 ~~~-----~i~~-~~~~~~~e~l~~Lk~aG~~-~i~i~~es-~~~~~~~i~~---~~~~~~~~~~i~~-~~~~Gi~v~-- 827 (965)
.++ .+++ +.|. ...+++|.+++++ .+.+++.+ +++.++++.+ ..+.++.+++++. .++.+.++.
T Consensus 173 ~g~~l~~r~itvST~G~--~~~i~~L~~~~l~~~LaiSL~a~d~e~r~~i~p~~~~~~l~~ll~~l~~~~~~~~~~V~ie 250 (343)
T PRK14468 173 QALAMSPRRVTLSTVGI--PKGIRRLAEEDLGVRLALSLHAPDEETRQRIIPTAHRYSIAEIMAAVRHYQAVTGRRVTLE 250 (343)
T ss_pred ccccccCceEEEECCCC--hHHHHHHHHhCcCcEEEEEcCCCCHHHHHHhccccccCCHHHHHHHHHHHHHhcCCeEEEE
Confidence 333 3444 3343 4678889999987 69999999 9999999974 3478999999974 455565555
Q ss_pred eeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 828 CGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 828 ~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
.-+|=|..++.|++.+..++++.+. ..|.+.+|.|.++. ...+++.+++.+...+++.
T Consensus 251 yvLI~GvNDs~e~~~~L~~ll~~~~---~~VnLIPynp~~~~---~~~~ps~e~i~~f~~~L~~ 308 (343)
T PRK14468 251 YTMLKGVNDHLWQAELLADLLRGLV---SHVNLIPFNPWEGS---PFQSSPRAQILAFADVLER 308 (343)
T ss_pred EEEeCCCcCCHHHHHHHHHHHhcCC---cEEEEEcCCCCCCC---CCCCCCHHHHHHHHHHHHH
Confidence 5555566799999999999999986 56777777776653 3456788777776666554
No 472
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.18 E-value=1.6e-09 Score=123.00 Aligned_cols=247 Identities=17% Similarity=0.154 Sum_probs=147.4
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
.+..++....++++++++.+ .+..++++||+.|+.+|+.... .++++||+....|++......
T Consensus 64 ~r~~~pt~~~le~~la~l~g--~~~~v~fsSG~~Ai~~al~~ll--------~~Gd~VI~~~~~y~~t~~~~~------- 126 (437)
T PRK05613 64 SRLTNPTVEALENRIASLEG--GVHAVAFASGQAAETAAILNLA--------GAGDHIVTSPRLYGGTETLFL------- 126 (437)
T ss_pred eCccChHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHhc--------CCCCEEEECCCccHHHHHHHH-------
Confidence 45667888999999999985 3678888889999998887552 256788888777766411100
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
.........+.+++.+ .|++++++++. +++.+|++|. +.|+.|.+.+ +++|+++
T Consensus 127 --~~l~~~Gi~v~~vd~~----------------~d~e~l~~~l~---~~tk~V~~e~-~~Np~~~v~d----i~~I~~l 180 (437)
T PRK05613 127 --VTLNRLGIEVTFVENP----------------DDPESWQAAVQ---PNTKAFFGET-FANPQADVLD----IPAVAEV 180 (437)
T ss_pred --HHHHhcCeEEEEECCC----------------CCHHHHHHhCC---ccCeEEEEEC-CCCCCCcccC----HHHHHHH
Confidence 0011112234444322 25678888875 3467788888 7788888887 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceeeec--cccCCCccccee-eeecHHHH-H----------hhhccC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSL-VMTTDKIY-N----------SIYYKN 517 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~gG~~pig~-v~~~~~i~-~----------~~~~~~ 517 (965)
|+++|+++|+|.++. .|.. +.-.....|++++| |-++|-.--+|. ++.+.+.. . .+....
T Consensus 181 a~~~gi~livD~t~a-~g~~-----~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~ 254 (437)
T PRK05613 181 AHRNQVPLIVDNTIA-TAAL-----VRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPD 254 (437)
T ss_pred HHHcCCeEEEECCCc-cccc-----cChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCc
Confidence 999999999999985 3221 11112335888765 877762123444 44332210 0 000000
Q ss_pred ------------C-------cccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHccc-----CCCc
Q psy8199 518 ------------N-------INIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPK 573 (965)
Q Consensus 518 ------------~-------~~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~ 573 (965)
. ............+|..+...+..|+.+.- ..++-.++..++.+.|++.. .+|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~l--R~~~~~~nA~~lA~~L~~hp~V~~V~yPg 332 (437)
T PRK05613 255 PAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSL--RLERHNENAIKVAEFLNNHEKVAKVNFAG 332 (437)
T ss_pred cccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHHcCCCcceEECCC
Confidence 0 00011122234567777766666655432 24555667777777776542 2344
Q ss_pred eee-----------eeceeEEEEEEEe
Q psy8199 574 IIN-----------FRQKGMIWAFDVI 589 (965)
Q Consensus 574 i~~-----------v~g~G~~~~i~~~ 589 (965)
+.. ..+-|.|++|++.
T Consensus 333 l~~~p~~~~~~~~~~~g~gg~~sf~l~ 359 (437)
T PRK05613 333 LKDSPWYATKEKLGLKYTGSVLSFDIK 359 (437)
T ss_pred CCCCccHHHHHHhcCCCCceEEEEEec
Confidence 321 1345889999985
No 473
>KOG0634|consensus
Probab=99.16 E-value=9.9e-09 Score=108.94 Aligned_cols=285 Identities=14% Similarity=0.130 Sum_probs=179.1
Q ss_pred eEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCC
Q psy8199 316 HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNIN 395 (965)
Q Consensus 316 ~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (965)
.++.++|.+.+.+.+++++.+ .++.|++=+.+|.+. +..+- + .++.++|.+-+...
T Consensus 126 diiit~G~t~~l~~~l~~~~N--------~gd~vlie~~ty~~A-L~s~~------------a--~gv~~ipv~md~~G- 181 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLIN--------RGDHVLIEEYTYPSA-LQSME------------A--LGVKIIPVKMDQDG- 181 (472)
T ss_pred eEEEecCCchHHHHHHHHhhc--------CCCceEEecccchHH-HHhcc------------c--cCceEEeccccCCC-
Confidence 789999999999999999976 467788777777544 11111 1 13455565432222
Q ss_pred CCCChhHHHHHHHHHHHHHHHhCC------CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCC
Q psy8199 396 KGNSANEIARCAIFDLEILLKKNH------NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 469 (965)
Q Consensus 396 ~~~~~~~~~~~d~~~le~~l~~~~------~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 469 (965)
-+++.|++.+..+. .+-...-+=|--||++|... +.+-=++|.+||++|++++|-||+|- |-
T Consensus 182 ----------i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tl-s~errk~iy~LArKyDfLIVeDdpYy-~L 249 (472)
T KOG0634|consen 182 ----------IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTL-SLERRKKIYQLARKYDFLIVEDDPYY-FL 249 (472)
T ss_pred ----------CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCcc-CHHHHHHHHHHHHHcCEEEEecCccc-ee
Confidence 26788888887652 12344555565788999766 77778999999999999999999985 32
Q ss_pred cccc----------ccc-----------ccccCCCccee---eeccccCCCcccceeeeecHHHHHhhhccCCccccccc
Q psy8199 470 RTGK----------FFA-----------CEHAEIWPDFL---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHS 525 (965)
Q Consensus 470 r~G~----------~~~-----------~~~~~~~pDiv---t~sK~l~gG~~pig~v~~~~~i~~~~~~~~~~~~~~~~ 525 (965)
..+. .+. +...+..-.++ +|||-++-| .++|++.+++.+++.+.. ....
T Consensus 250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPG-lRlG~it~~~~~l~ril~------~ae~ 322 (472)
T KOG0634|consen 250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPG-LRLGWITGNSLFLKRILD------LAEV 322 (472)
T ss_pred eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCc-ceeEEeecCHHHHHHHhh------hcce
Confidence 2221 001 00111122233 799999988 799999999977776654 1233
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcccHHHHHHHH-------HHHHHHHHHcccCCCc--ee-eeeceeEEEEEEEe--ecCc
Q psy8199 526 HSYSGNPLACCAALATLEIFNKDNILQRISQD-------MKKITKALTSLITHPK--II-NFRQKGMIWAFDVI--IEDP 593 (965)
Q Consensus 526 ~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~-------~~~l~~~L~~l~~~~~--i~-~v~g~G~~~~i~~~--~~~~ 593 (965)
.|-+.+.+++....+.|+...++++++.+.+. ...+...|.. ..|. .. ..+..|+|+++++. ..+.
T Consensus 323 ~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~k--ylp~~~~~~~~P~aGmFiwv~i~~~~~~~ 400 (472)
T KOG0634|consen 323 ATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDK--YLPKSVCEYHPPKAGMFIWVEIPYINFDT 400 (472)
T ss_pred eecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCCeeEEecCCcceEEEEEeccccccc
Confidence 55567778888888999877666544443332 2233333322 2232 22 34556888888874 0111
Q ss_pred cc-hhhHHHHHHHHHHHcCcEEeecC-----------C-EEEEeCCcccCHHHHHHHHHhhhcccc
Q psy8199 594 EQ-IETFSKKFFVAALKNELLLRPIG-----------N-TVYLMPPYILNKNEIQHMTSAIFQTFN 646 (965)
Q Consensus 594 ~~-~~~~~~~~~~~l~~~Gi~~~~~~-----------~-~lR~~p~~~~t~~~i~~~~~~l~~~~~ 646 (965)
.. .....+.+...+.++||.+.++. . .+|++-++ .+.+++++.++++..++.
T Consensus 401 ~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~-a~~e~l~~g~~rf~~~ik 465 (472)
T KOG0634|consen 401 KKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAF-AEPEKLDEGIERFGSVIK 465 (472)
T ss_pred ccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeec-CCHHHHHHHHHHHHHHHH
Confidence 11 12234456778889999887531 2 78888653 345578888877765543
No 474
>KOG4355|consensus
Probab=99.16 E-value=5.1e-10 Score=115.37 Aligned_cols=251 Identities=14% Similarity=0.176 Sum_probs=165.0
Q ss_pred cCHHHHHHHHHhhhcccccHHHHHHhcCCCchhHHHHHHHHHHHhcCCCeEEEeEeEeeccCCCCCCCCCCCCCCcCCCC
Q psy8199 629 LNKNEIQHMTSAIFQTFNELDEVINLFNLPFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTE 708 (965)
Q Consensus 629 ~t~~~i~~~~~~l~~~~~~~~e~l~l~~~~~~~l~~~a~~~~~~~~~g~~~~~~~~i~~~s~~C~~~C~fC~~~~~~~~~ 708 (965)
+.-.+||+.++..++.+.- ..+.||.....-- ...-++|+..+ .-+|.+ ..+|-+.|.||.... ....
T Consensus 145 igvqqidrvvevveetlkg--hsvrll~rr~~ga-ldlpkvrknpl-------ieIi~i-ntgclgaCtyckTkh-arg~ 212 (547)
T KOG4355|consen 145 IGVQQIDRVVEVVEETLKG--HSVRLLTRRTLGA-LDLPKVRKNPL-------IEIISI-NTGCLGACTYCKTKH-ARGL 212 (547)
T ss_pred eehhhhhHHHHHHHHHhcc--ceEeeeecccccc-cCchhhccCCc-------eEEEEe-ccccccccccccccc-cccc
Confidence 4456788888777654432 1223332110000 01125555544 345666 889999999996432 1222
Q ss_pred cccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcc----cHHHHHHHH-HHHHh-cCcEeEEecCCCCHHHHHHHH
Q psy8199 709 ITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDR----DLDNIENMI-CEVKK-IGLETCLTLGMLNENQAYRLK 782 (965)
Q Consensus 709 ~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~----~~~~~~~~~-~~i~~-~~~~i~~~~~~~~~e~l~~Lk 782 (965)
... .+.+++++.++...+.|+.+|.+.+-...-... .+..++..+ +.|.+ ..+.+.+++-+.--+.++.++
T Consensus 213 l~s---y~~dslvervrt~f~egv~eIwltsedTgaygrdig~slp~ll~klv~~iPe~cmlr~gmTnpP~ilehl~e~a 289 (547)
T KOG4355|consen 213 LAS---YPKDSLVERVRTSFEEGVCEIWLTSEDTGAYGRDIGKSLPKLLWKLVEVIPESCMLRAGMTNPPYILEHLEEAA 289 (547)
T ss_pred ccc---CCHHHHHHHHHHHHhcCcEEEEecccccchhhhhhhhhhHHHHHHHHHhcchhhhhhhcCCCCchHHHHHHHHH
Confidence 223 459999999999999999999998754321111 222222222 22222 344444444444344444443
Q ss_pred Hh----CC-CeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHH--cCCceeeeEEEec-CCCHHHHHHHHHHHHhcCC
Q psy8199 783 KV----GL-DYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRN--VGINICCGGIIGL-SESRDQRAELIFQLANLNP 853 (965)
Q Consensus 783 ~a----G~-~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~--~Gi~v~~~~i~Gl-~et~ed~~~~l~~l~~l~~ 853 (965)
.. .+ ..+++.++| ++.++-+|.+.....+.....+.+.+ -||.+.+.+|.|+ +||+||+.++++.+++.+
T Consensus 290 ~vlrhp~vYsflhvpvqsgsdsvl~emkreyc~~dfk~Vvd~LterVPgi~IATDiIcgFPtETdeDFeeTmeLv~kYK- 368 (547)
T KOG4355|consen 290 FVLRHPRVYSFLHVPVQSGSDSVLTEMKREYCNFDFKIVVDFLTERVPGITIATDIICGFPTETDEDFEETMELVRKYK- 368 (547)
T ss_pred HHhcCCeEEEEEecccccCchhHHHHHHHHHhhhhHHHHHHHHHhhCCCcEEeeeeeecCCCCchHHHHHHHHHHHHcc-
Confidence 32 12 233566899 99999999998888888888888888 7999999999999 699999999999999999
Q ss_pred CCCceeeccccccCCCCCCCCCCCCHHHH----HHHHHHHHHHCCCC
Q psy8199 854 YPESVPINNLVQIKGTPLYGSSILDPLEF----IRTIAVARITMPTS 896 (965)
Q Consensus 854 ~~~~i~~~~~~P~~gT~l~~~~~~~~~~~----~~~ia~~R~~lp~~ 896 (965)
..++-++.|+|.||||-.+....+..+. .++-.++|.+-|..
T Consensus 369 -FPslfInQfyPRpGTPAAkmkki~a~~vkkRTk~ls~lF~sy~pYt 414 (547)
T KOG4355|consen 369 -FPSLFINQFYPRPGTPAAKMKKIPAVEVKKRTKALSELFRSYTPYT 414 (547)
T ss_pred -CchhhhhhcCCCCCChHHhhhcccHHHHHHHHHHHHHHHHhcCCcc
Confidence 7788899999999999988766666444 34455566666654
No 475
>PRK14469 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.15 E-value=3.8e-09 Score=116.24 Aligned_cols=188 Identities=15% Similarity=0.206 Sum_probs=135.8
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH---CCCCEEEEeeccCCCCcccHHHHHHHHHHHHh----
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS---DGATRFCMGAAWRELKDRDLDNIENMICEVKK---- 761 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~---~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~---- 761 (965)
..||+.+|.||..... . ..+.++.+||++++....+ .++..|.+.|-+.|+.. .+.+.++++.+++
T Consensus 108 q~GC~l~C~fC~tg~~---g--~~r~lt~~EI~~qv~~~~~~~~~~v~~Vvf~GmGEPLln--~d~v~~~i~~l~~~~~~ 180 (343)
T PRK14469 108 QVGCPVKCIFCATGQS---G--FVRNLTTGEIVSQILAMEKEEKKKVGNVVYMGMGEPLLN--YENVIKSIKILNHKKMK 180 (343)
T ss_pred cCCCCCcCcCCCCCCC---C--ccccCCHHHHHHHHHHHHHhccCCcCeEEEEccChhhhh--HHHHHHHHHHHhchhcc
Confidence 6999999999974321 1 1234889999999865432 36889999884557544 5667777777753
Q ss_pred -cCc-EeEEe-cCCCCHHHHHHHHHhCCC-eEeccCCC-CHHHHhcccC---CCCHHHHHHHHHHHHH-cCCcee--eeE
Q psy8199 762 -IGL-ETCLT-LGMLNENQAYRLKKVGLD-YYNHNLDT-SPKLYGDIIS---TRDYENRLNTLKNVRN-VGINIC--CGG 830 (965)
Q Consensus 762 -~~~-~i~~~-~~~~~~e~l~~Lk~aG~~-~i~i~~es-~~~~~~~i~~---~~~~~~~~~~i~~~~~-~Gi~v~--~~~ 830 (965)
.+. .++++ .|. .+.++.|.+.|++ .+.+++++ +++.++++.+ ..+.++.+++++...+ .+.++. .-+
T Consensus 181 ~~g~~~itisTnG~--~~~i~~L~~~~l~~~LaiSL~a~~~e~r~~i~p~~~~~~l~~Il~~l~~~~~~~~~~v~i~yvl 258 (343)
T PRK14469 181 NIGIRRITISTVGI--PEKIIQLAEEGLDVKLALSLHAPTNFKRDQIVPLNKKYSIEEIINAVKIYQKKTGNRVTIEYIL 258 (343)
T ss_pred cCCCCeEEEECCCC--hHHHHHHHhhCCCcEEEEEeCCCCHHHHHhhcCcCCCCCHHHHHHHHHHHHHHhCCeEEEEEEE
Confidence 232 45443 343 6788999999998 79999999 8999988753 5689999999887554 355554 446
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8199 831 IIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARIT 892 (965)
Q Consensus 831 i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~ 892 (965)
|-|..++.+|+.+.+++++.++ ..|.+.+|.|.++ ...+++.+++.+...+++..
T Consensus 259 I~g~NDs~ed~~~La~llk~~~---~~VnLIpynp~~~----~~~~ps~e~l~~f~~~l~~~ 313 (343)
T PRK14469 259 IKGFNDEIEDAKKLAELLKGLK---VFVNLIPVNPTVP----GLEKPSRERIERFKEILLKN 313 (343)
T ss_pred ECCCCCCHHHHHHHHHHHhccC---cEEEEEecCCCCc----cCCCCCHHHHHHHHHHHHHC
Confidence 6677799999999999999886 4577777777654 34556777777776666653
No 476
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.15 E-value=4.1e-09 Score=116.92 Aligned_cols=311 Identities=11% Similarity=0.053 Sum_probs=176.6
Q ss_pred CHHHHHHHHHHHhhccc-----cccCCCCc---HHHHHHHHHHHhhcCC-CCCeEEEcCC-hhHHHHHHHHHHHHHHHhc
Q psy8199 272 NSYINKALKNQLNKLEH-----VMLSNLTH---KPVIKLSEKLSSLTQY-KLGHCFYGSD-GASAVEVALKMSFHYWYNK 341 (965)
Q Consensus 272 ~p~v~~av~~~~~~~~~-----~~~~~~~~---~~~~~la~~l~~~~~~-~~~~v~~~~s-GseA~~~Al~~a~~~~~~~ 341 (965)
+..|++|+.+.+..... ...+.... +...++.+.+.++++. ...+|+|++| ||+|+|+++.....
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~----- 78 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA----- 78 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC-----
Confidence 56788888887764321 11111222 4456777888888863 2346777655 99999999876532
Q ss_pred CCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCc
Q psy8199 342 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNK 421 (965)
Q Consensus 342 g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 421 (965)
+.+++++...++.|....-+.- -... +..+..+... +++.. .++++++ ++ .+
T Consensus 79 ---~~~~~l~i~~G~fg~r~~~~a~-----------~~g~-~~~~~~~~~~--~~~~~------~~~~~~~--~~---~~ 130 (349)
T TIGR01364 79 ---EGKVADYIVTGAWSKKAAKEAK-----------KYGV-VNVVASGKEG--NYTKI------PDPSTWE--IS---ED 130 (349)
T ss_pred ---CCCeEEEEECCHHHHHHHHHHH-----------HhCC-cEEEeccccC--CCCCC------CCHHhcC--CC---CC
Confidence 4566777766665553211110 0111 1122211000 00000 1333333 11 23
Q ss_pred EEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec--cccCCCccc
Q psy8199 422 IAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLP 499 (965)
Q Consensus 422 ~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~gG~~p 499 (965)
+.+|.+-- .-+++|+..+ ++++.+++++++|-|++ +|. .....+. -|++++| |+++ .-.
T Consensus 131 ~~~v~~th-~ETstGv~~~---------~l~~~~~~l~iVDavss-~g~--~~id~~~----~d~~~~ssqK~lg--P~G 191 (349)
T TIGR01364 131 AAYVHYCA-NETIHGVEFR---------ELPDVKNAPLVADMSSN-ILS--RPIDVSK----FGLIYAGAQKNIG--PAG 191 (349)
T ss_pred CCEEEEcC-CCCcccEecc---------eecccCCCeEEEEcccc-ccC--ccCCHHH----ccEEEEecccccC--CCc
Confidence 33444433 3356777653 67778899999999997 542 2222332 2477765 8773 345
Q ss_pred ceeeeecHHHHHhhhccCCc----cc-ccccCCC-CCCHHHHHHHHHHHHHHhcc-c---HHHHHHHHHHHHHHHHHccc
Q psy8199 500 LSLVMTTDKIYNSIYYKNNI----NI-FLHSHSY-SGNPLACCAALATLEIFNKD-N---ILQRISQDMKKITKALTSLI 569 (965)
Q Consensus 500 ig~v~~~~~i~~~~~~~~~~----~~-~~~~~t~-~~~~~~~aaa~a~L~~~~~~-~---~~~~~~~~~~~l~~~L~~l~ 569 (965)
+|.+.+++++++.+...... .. .....++ +.|-....+..++|+++.++ + +.++.+++.+++++.|+++
T Consensus 192 lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~- 270 (349)
T TIGR01364 192 LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNS- 270 (349)
T ss_pred eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 89999999988765431000 00 0012233 44555677777899988765 3 4555666777777777665
Q ss_pred CCCcee-e-ee--cee-EEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeecC---CEEEEeCCcccCHHHHHHHHHhh
Q psy8199 570 THPKII-N-FR--QKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEIQHMTSAI 641 (965)
Q Consensus 570 ~~~~i~-~-v~--g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~lR~~p~~~~t~~~i~~~~~~l 641 (965)
+++. . .. .+. ....|.+. + ......+...+.++|+++.+.. +.+|+++....+.++++.+++++
T Consensus 271 --~gl~~~~~~~~~rs~~v~sf~~~--~----~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al 342 (349)
T TIGR01364 271 --NGFYRNPVDPRNRSRMNVVFTLG--N----EELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFM 342 (349)
T ss_pred --CCeeccCCCHHHcCCeEEEEecC--C----hhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHH
Confidence 2221 1 11 122 44555543 1 1223456678889999666542 68999999999999999999988
Q ss_pred hc
Q psy8199 642 FQ 643 (965)
Q Consensus 642 ~~ 643 (965)
++
T Consensus 343 ~~ 344 (349)
T TIGR01364 343 KE 344 (349)
T ss_pred HH
Confidence 75
No 477
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=3.6e-09 Score=111.08 Aligned_cols=194 Identities=18% Similarity=0.249 Sum_probs=139.8
Q ss_pred cCCCCCCCCCCCCCCcCCC-CcccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHHHhcCcEeE
Q psy8199 689 TGGCTEDCGYCPQSTHYNT-EITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETC 767 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~-~~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~~~~i~ 767 (965)
+.||+++|.||..+..... .....+..+++++.+.+. ...+...|.+++|+ |. .-.+.+.++++..|+.|+.++
T Consensus 42 ~~GCnlrC~~C~N~~~~~~~~~~~~~~~~~e~l~~~~~--~~~~~~gvt~SGGE-P~--~q~e~~~~~~~~ake~Gl~~~ 116 (260)
T COG1180 42 LQGCNLRCPYCQNPEISQRGREVSGEEVSPEVLVDKAF--YSESGGGVTFSGGE-PT--LQAEFALDLLRAAKERGLHVA 116 (260)
T ss_pred eCCCCCCCCCCCChhHhcccccCchhhcCHHHHHHHhh--hcCCCCEEEEECCc-ch--hhHHHHHHHHHHHHHCCCcEE
Confidence 7999999999987765431 112223344444444332 23367889998775 43 347899999999999999987
Q ss_pred E-ecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEE--ecCCCHHHHHH
Q psy8199 768 L-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGII--GLSESRDQRAE 843 (965)
Q Consensus 768 ~-~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~--Gl~et~ed~~~ 843 (965)
+ ++|..+++.++.|.+. +|.+.+.+-. +++.|+++..... +..++.++.+.+.|+.+....++ |..++.+++.+
T Consensus 117 l~TnG~~~~~~~~~l~~~-~D~v~~DlK~~~~~~y~~~tg~~~-~~vl~~~~~l~~~g~~ve~r~lviPg~~d~~e~i~~ 194 (260)
T COG1180 117 LDTNGFLPPEALEELLPL-LDAVLLDLKAFDDELYRKLTGADN-EPVLENLELLADLGVHVEIRTLVIPGYNDDEEEIRE 194 (260)
T ss_pred EEcCCCCCHHHHHHHHhh-cCeEEEeeccCChHHHHHHhCCCc-HHHHHHHHHHHcCCCeEEEEEEEECCCCCCHHHHHH
Confidence 7 7899999999999998 8999999999 8888999986555 99999999999999977655554 44588999999
Q ss_pred HHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8199 844 LIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARIT 892 (965)
Q Consensus 844 ~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~ 892 (965)
.++++.++.. ..-+.+.+|.| .-.+...++....++-++...++..
T Consensus 195 i~~~i~~~~~-~~p~~~l~fhp--~~~~~~~p~~~~~~le~~~~~a~~~ 240 (260)
T COG1180 195 LAEFIADLGP-EIPIHLLRFHP--DYKLKDLPPTPVETLEEAKKLAKEE 240 (260)
T ss_pred HHHHHHhcCC-cccEEEecccc--CccccccCCCcHHHHHHhHhhhHHH
Confidence 9999998651 33444555544 3334444544555555556665554
No 478
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.15 E-value=4.5e-09 Score=118.21 Aligned_cols=301 Identities=12% Similarity=0.109 Sum_probs=167.9
Q ss_pred CcHHHHHHHHHHHhhcCCC-CCeEEEcCChh-HHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCc
Q psy8199 295 THKPVIKLSEKLSSLTQYK-LGHCFYGSDGA-SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 372 (965)
Q Consensus 295 ~~~~~~~la~~l~~~~~~~-~~~v~~~~sGs-eA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 372 (965)
......++.+.+++.++.. ...++++++|| .|+..++..++.. + ++.+.||+..-+ |-++.-+....|-
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~----~-~~gd~VI~p~~t-h~S~~kAi~~~G~--- 173 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK----R-PKAKYVIWPRID-QKSCIKAISTAGF--- 173 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc----C-CCCCEEEEECcC-hHHHHHHHHHcCC---
Confidence 3455667778888888632 23799999999 6888887766431 1 134667777665 5555555444441
Q ss_pred cchhcccCCCeeEecC--CCCCCCCCCCChhHHHHHHHHHHHHHHHhCC-CcEEEEEEccccccCCCcccCChHHHHHHH
Q psy8199 373 KEIYTSLLNKTYIITT--PDSRNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVR 449 (965)
Q Consensus 373 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~aaii~ep~v~~~~G~~~~~~~~l~~l~ 449 (965)
..++++. .+.... -|+++|+++|.+.. ..+.+|+..| ..+.+|...+ +++|.
T Consensus 174 ---------~pv~Vd~~~d~~~~~-----------iD~e~Le~aIt~~~~kai~~Vv~Tp-~t~~~g~~dd----L~eIa 228 (444)
T TIGR03531 174 ---------EPRVIETVLDGDELT-----------TDVEDIERAIEEIGPDNILCVLSTT-SCFAPRSPDD----IEEIA 228 (444)
T ss_pred ---------eEEEeeeeecCcCCC-----------cCHHHHHHHHHhccCCCEEEEEEcC-CcCCCcchhC----HHHHH
Confidence 2233331 111111 37899999998543 5677777777 3333333333 99999
Q ss_pred HHHHhcCCeEEEeccccCCCcccccccc--cccCC-Ccceeee--ccccCCCcccceeeee-cHHHHHhhhccCCccccc
Q psy8199 450 EICNNYNIHLIADEIAVGCGRTGKFFAC--EHAEI-WPDFLCL--SKGITGGYLPLSLVMT-TDKIYNSIYYKNNINIFL 523 (965)
Q Consensus 450 ~l~~~~g~llI~DEv~tg~gr~G~~~~~--~~~~~-~pDivt~--sK~l~gG~~pig~v~~-~~~i~~~~~~~~~~~~~~ 523 (965)
++|++||+++|+|++|. ++.. ..... ..... ..|++++ .|.+...++ -|+++. ++++++.+... .
T Consensus 229 ~la~k~gI~lIvDaAyg-~~~~-~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~------y 299 (444)
T TIGR03531 229 KICANYDIPHIVNNAYG-LQSN-KYMELINKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKS------Y 299 (444)
T ss_pred HHHHHcCCEEEEECcCc-CcCh-hhhhhhhccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHh------c
Confidence 99999999999999996 3211 00000 11112 3577765 586653212 244546 57777776541 1
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHccc-CCCc-eeeeeceeEEEEEEEeecCccchhhH
Q psy8199 524 HSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKALTSLI-THPK-IINFRQKGMIWAFDVIIEDPEQIETF 599 (965)
Q Consensus 524 ~~~t~~~~~~~~aaa~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~l~-~~~~-i~~v~g~G~~~~i~~~~~~~~~~~~~ 599 (965)
.+ .. .+..++.+..+.+..-.+ .++.++..++.+++.+.|+++. ++.. +-.++..-.-+++.+..-. ...
T Consensus 300 ~g-~~-~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~----~~~ 373 (444)
T TIGR03531 300 PG-RA-SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK----GKD 373 (444)
T ss_pred cC-CC-CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc----ccC
Confidence 11 21 223445555454433221 3456667778888888888873 3321 2222222223333332100 111
Q ss_pred HHHHHHHHHHcCcE----EeecC---------------------CEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 600 SKKFFVAALKNELL----LRPIG---------------------NTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 600 ~~~~~~~l~~~Gi~----~~~~~---------------------~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
...+...|..++|- +.++. ..+-++.++.++.+|++.++++++++
T Consensus 374 ~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 374 PTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred HHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 33456667667662 11210 13444455667899999999988764
No 479
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.15 E-value=2.2e-08 Score=115.70 Aligned_cols=314 Identities=14% Similarity=0.073 Sum_probs=168.0
Q ss_pred cHHHHHHHHHHHhhcCC-------------CCCeEEEcCChhHHHHHHHHHHHHHHHhc-CC---------C-------C
Q psy8199 296 HKPVIKLSEKLSSLTQY-------------KLGHCFYGSDGASAVEVALKMSFHYWYNK-GF---------L-------N 345 (965)
Q Consensus 296 ~~~~~~la~~l~~~~~~-------------~~~~v~~~~sGseA~~~Al~~a~~~~~~~-g~---------~-------~ 345 (965)
++....+.+.++++++. +...-.|++|||+||..|+.+||...... |. . .
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 44455566666666521 01235789999999999999999863211 00 0 0
Q ss_pred ceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHh---CCCcE
Q psy8199 346 KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKK---NHNKI 422 (965)
Q Consensus 346 ~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~ 422 (965)
...+|+....-|-+..-+....|. ....+..+|.... +. -|+++|+++|++ .+..+
T Consensus 208 ~~~~v~~S~~~H~S~~kaa~~lgl---------g~~~v~~vp~d~~-g~-----------~d~~~L~~~i~~~~~~g~~~ 266 (522)
T TIGR03799 208 DGLAILVSERGHYSLGKAADVLGI---------GRDNLIAIKTDAN-NR-----------IDVDALRDKCAELAEQNIKP 266 (522)
T ss_pred CceEEEECCCchHHHHHHHHHcCC---------CcccEEEEEeCCC-Cc-----------CCHHHHHHHHHHHHHCCCCc
Confidence 122333333445443222111110 0113455665322 11 378888888863 23344
Q ss_pred EEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC-Ccceeeec--cccCCCccc
Q psy8199 423 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLP 499 (965)
Q Consensus 423 aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~-~pDivt~s--K~l~gG~~p 499 (965)
.+|+... ...++|.+.| +++|.++|++||+++++|-+|.|....-..+.....|+ ..|.++++ |.+.+. +.
T Consensus 267 ~~vvata-Gtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P-~g 340 (522)
T TIGR03799 267 LAIVGVA-GTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVP-MG 340 (522)
T ss_pred EEEEEEe-cCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcC-cc
Confidence 5555444 3557899998 99999999999999999999975421111011112355 68999998 555443 67
Q ss_pred ceeeeecH-HHHHhhhccCC------cccccccCCCCCCHHH-HHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHcc
Q psy8199 500 LSLVMTTD-KIYNSIYYKNN------INIFLHSHSYSGNPLA-CCAALATLEIFNKD---NILQRISQDMKKITKALTSL 568 (965)
Q Consensus 500 ig~v~~~~-~i~~~~~~~~~------~~~~~~~~t~~~~~~~-~aaa~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~l 568 (965)
.|+++.++ +..+.+..... ...+. ..++.+..-+ .....++|+.+... .+.++..++.++|.+.|++.
T Consensus 341 ~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~-~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~ 419 (522)
T TIGR03799 341 AGMVLFKDPALMSAIEHHAEYILRKGSKDLG-SHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ 419 (522)
T ss_pred cEEEEEeCHHHHHHhccCcchhcCCCCCccc-cceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 88888764 45454432100 00000 0122222112 22355667666543 35566666777777777554
Q ss_pred cCCCceeeee-ceeEEEEEEEeecCc----------------cchhhHHHHHHHHHHHcCcEEee-c--------C---C
Q psy8199 569 ITHPKIINFR-QKGMIWAFDVIIEDP----------------EQIETFSKKFFVAALKNELLLRP-I--------G---N 619 (965)
Q Consensus 569 ~~~~~i~~v~-g~G~~~~i~~~~~~~----------------~~~~~~~~~~~~~l~~~Gi~~~~-~--------~---~ 619 (965)
|.+..+. +.-.++.|.+...+. .........+.+++.+.|..... . + .
T Consensus 420 ---~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~ 496 (522)
T TIGR03799 420 ---PDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTV 496 (522)
T ss_pred ---CCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcE
Confidence 4444222 223344444431110 00112334677788888865432 1 1 2
Q ss_pred EEEEeC-CcccCHHHHHHHHHh
Q psy8199 620 TVYLMP-PYILNKNEIQHMTSA 640 (965)
Q Consensus 620 ~lR~~p-~~~~t~~~i~~~~~~ 640 (965)
.+|++. ....+.++++.+++.
T Consensus 497 ~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 497 VFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEEEEecCCCCCHHHHHHHHHH
Confidence 588864 334677778876653
No 480
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.14 E-value=6.5e-11 Score=126.42 Aligned_cols=251 Identities=16% Similarity=0.189 Sum_probs=142.9
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEE
Q psy8199 271 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFI 350 (965)
Q Consensus 271 ~~p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi 350 (965)
.+|++.+|+.++ ... . ...+..+...++.+++++++ +.+.++|++||+.||..|++...+ +.+.||
T Consensus 7 ~~~~m~~a~~~a-~~g-d--~~Yg~D~~~~~l~~~i~~l~--g~e~a~f~~sGT~An~~al~~~~~--------~~~~vi 72 (290)
T PF01212_consen 7 PTPAMLEAMAAA-NVG-D--DAYGEDPTTARLEERIAELF--GKEAALFVPSGTMANQLALRAHLR--------PGESVI 72 (290)
T ss_dssp S-HHEEHHHHHT-TSB----CCTTSSHHHHHHHHHHHHHH--TSSEEEEESSHHHHHHHHHHHHHH--------TTEEEE
T ss_pred CCHHHHHHHHcc-ccC-C--cccCCChhHHHHHHHHHHHc--CCCEEEEeCCCChHHHHHHHHHHh--------cCCcee
Confidence 579999999433 322 1 13567888899999999999 578889999999999999998864 456666
Q ss_pred EEcCCccCCc--cccccccCCcCccchhcccCCCeeEecCCCCC-CCCCCCChhHHHHHHHHHHHHHHHh---CCCcEEE
Q psy8199 351 CLQNSYHGET--LGALAVTNIQSFKEIYTSLLNKTYIITTPDSR-NINKGNSANEIARCAIFDLEILLKK---NHNKIAA 424 (965)
Q Consensus 351 ~~~~~yHg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~aa 424 (965)
+-+. .|... .++.. ...+...++.+... +. .++++|++.+.+ +..++++
T Consensus 73 ~~~~-aHi~~~E~ga~~-------------~~~G~~~~~l~~~~~G~-----------l~~~~l~~~~~~~~~h~~~~~~ 127 (290)
T PF01212_consen 73 CADT-AHIHFDETGAIE-------------ELSGAKLIPLPSDDDGK-----------LTPEDLEAAIEEHGAHHPQPAV 127 (290)
T ss_dssp EETT-EHHHHSSTTHHH-------------HHTTCEEEEEBECTGTB-----------B-HHHHHHHHHHHTGTSGGEEE
T ss_pred cccc-ceeeeeccchhh-------------HhcCcEEEECCCcccCC-----------CCHHHHHHHhhhccccCCCccE
Confidence 6654 34432 12110 01233333333222 22 378999999877 3467899
Q ss_pred EEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccC--CCcccccccccccCCCcceeeeccccCCCccccee
Q psy8199 425 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG--CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSL 502 (965)
Q Consensus 425 ii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~pig~ 502 (965)
|.+|. ..+..|..+++.+.+++|.++|++||+.|++|-+.-. ....|. ....+.-.-|+++||=.-++| .|.|+
T Consensus 128 v~le~-t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~--~~~e~~~~~D~v~~~~tK~~g-~~~Ga 203 (290)
T PF01212_consen 128 VSLEN-TTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGV--SLAEIAAGADSVSFGGTKNGG-APGGA 203 (290)
T ss_dssp EEEES-SBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHH--HHHHHHTTSSEEEEETTSTT--SSSEE
T ss_pred EEEEe-cCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccc--cHHHHhhhCCEEEEEEEcccc-cccce
Confidence 99998 6676666677899999999999999999999965310 000011 111111236888765333333 46665
Q ss_pred e-eecHHHHHhhhccCCcccccccCCCCCCHHHHH-H--HHHHHHHHhc-ccHHHHHHHHHHHHHHHHHcc
Q psy8199 503 V-MTTDKIYNSIYYKNNINIFLHSHSYSGNPLACC-A--ALATLEIFNK-DNILQRISQDMKKITKALTSL 568 (965)
Q Consensus 503 v-~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~a-a--a~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~l 568 (965)
+ ++++++++....- .. ..++.+....+-++ . ..+++..++. .....+..++.++|.+.|+.+
T Consensus 204 vl~~~~~~i~~~~~~---~k-~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~ 270 (290)
T PF01212_consen 204 VLAGNKEFIAKARRQ---RK-RLGGGMRQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL 270 (290)
T ss_dssp EEEESHHHHHHHHHH---HH-HHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE
T ss_pred EEEechHHHHHHHHH---HH-HhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC
Confidence 4 4677755433220 00 11211111111112 0 0122222222 234566677788888888765
No 481
>TIGR03820 lys_2_3_AblA lysine-2,3-aminomutase. This model describes lysine-2,3-aminomutase as found along with beta-lysine acetyltransferase in a two-enzyme pathway for making the compatible solute N-epsilon-acetyl-beta-lysine. This compatible solute, or osmolyte, is known to protect a number of methanogenic archaea against salt stress. The trusted cutoff distinguishes a tight clade with essentially full-length homology from additional homologs that are shorter or highly diverged in the C-terminal region. All members of this family have the radical SAM motif CXXXCXXC, while some but not all have a second copy of the motif in the C-terminal region.
Probab=99.14 E-value=3.3e-09 Score=116.60 Aligned_cols=195 Identities=13% Similarity=0.123 Sum_probs=139.9
Q ss_pred EeEeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC-CCCEEEEeeccCCCCccc--HHHHHHHHHHH
Q psy8199 683 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD-GATRFCMGAAWRELKDRD--LDNIENMICEV 759 (965)
Q Consensus 683 ~~i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~-g~~~i~l~~g~~~~~~~~--~~~~~~~~~~i 759 (965)
.++.+ |+.|+.+|+||...+..+. ....++.+++.+.+.++.+. ++++|.|+||+ |+...+ ++.+++.++.+
T Consensus 110 vLl~v-T~~C~~~CryC~R~~~~g~---~~~~ls~eei~~~i~yI~~~p~I~~VlLSGGD-PLll~d~~L~~iL~~L~~I 184 (417)
T TIGR03820 110 VLFLV-SNTCAMYCRHCTRKRKVGD---RDSIPSKEQILEGIEYIRNTPQIRDVLLSGGD-PLLLSDDYLDWILTELRAI 184 (417)
T ss_pred EEEEE-cCCcCCCCcCCCCcccCCc---ccccCCHHHHHHHHHHHHhcCCCCEEEEeCCc-cccCChHHHHHHHHHHhhc
Confidence 34455 9999999999975542221 22347889999988888875 89999997775 544322 34444444433
Q ss_pred Hhc-CcEeEEe-----cCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhcccCCCCHHHHHHHHHHHHHcCCcee--eeEE
Q psy8199 760 KKI-GLETCLT-----LGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINIC--CGGI 831 (965)
Q Consensus 760 ~~~-~~~i~~~-----~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~--~~~i 831 (965)
... .+.+.++ +..++++.++.|++.+...+.+.++..+++ .++..++++.++++|+.+. +.++
T Consensus 185 phV~~IRI~TR~pvv~P~RIT~ell~~Lk~~~~~~v~~h~nhp~Ei---------t~~a~~Al~~L~~aGI~l~nQsVLL 255 (417)
T TIGR03820 185 PHVEVIRIGTRVPVVLPQRITDELVAILKKHHPVWLNTHFNHPREI---------TASSKKALAKLADAGIPLGNQSVLL 255 (417)
T ss_pred CCCceEEEeeccccccccccCHHHHHHHHhcCCeEEEEeCCChHhC---------hHHHHHHHHHHHHcCCEEEeeceEE
Confidence 221 2445554 557799999999999976776666664443 5889999999999999765 5667
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q psy8199 832 IGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTS 896 (965)
Q Consensus 832 ~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~ 896 (965)
=|.+++.+-+.++.+.+.+++ +.-..++..-|.+|+.- -..+.++.++++..+|-.++..
T Consensus 256 kGVND~~~~l~~L~~~L~~~g--V~PYYl~~~d~v~G~~h---Frv~~~~g~~I~~~lr~~~sG~ 315 (417)
T TIGR03820 256 AGVNDCPRIMKKLVHKLVANR--VRPYYLYQCDLSEGLSH---FRTPVGKGIEIIESLIGHTSGF 315 (417)
T ss_pred CCcCCCHHHHHHHHHHHHHCC--CeeceeeeccCCCCccc---ccCcHHHHHHHHHHHHHhCCCC
Confidence 777899999999999999998 44444455566677643 3468899999999999988654
No 482
>PLN02880 tyrosine decarboxylase
Probab=99.13 E-value=1.1e-08 Score=118.02 Aligned_cols=317 Identities=11% Similarity=0.056 Sum_probs=181.8
Q ss_pred CcHHHHHHHHHHHhhcCCCC-------CeEEEcCChhHHHHHHHHHHHHHHH-hcCCCCc-eEEEEEcCCccCCcccccc
Q psy8199 295 THKPVIKLSEKLSSLTQYKL-------GHCFYGSDGASAVEVALKMSFHYWY-NKGFLNK-KKFICLQNSYHGETLGALA 365 (965)
Q Consensus 295 ~~~~~~~la~~l~~~~~~~~-------~~v~~~~sGseA~~~Al~~a~~~~~-~~g~~~~-~~vi~~~~~yHg~~~~~~~ 365 (965)
.+....++.+.++++++.+. ..-++++|||+||..|+.+||.... ..|..+. .-++.....-|-+..-+..
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 45566677788888885332 2367899999999999999998642 2232221 2234344444666443433
Q ss_pred ccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhC---CCcEEEEEEccccccCCCcccCC
Q psy8199 366 VTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYD 441 (965)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~aaii~ep~v~~~~G~~~~~ 441 (965)
+.|-. ...+..+|.+.. .+. -|+++|+++|++. +....+|+..- -..++|.+-|
T Consensus 200 ~lGlg---------~~~v~~Vp~d~~~~~~-----------md~~~L~~~i~~~~~~g~~p~~vvata-GTT~~GaiDp- 257 (490)
T PLN02880 200 IAGIH---------PENCRLLKTDSSTNYA-----------LAPELLSEAISTDLSSGLIPFFLCATV-GTTSSTAVDP- 257 (490)
T ss_pred HcCCC---------HHHEEEeecCCCcCCc-----------CCHHHHHHHHHHHHHCCCccEEEEEec-CCCcCcccCc-
Confidence 33311 112455665421 112 3788888888642 33345555544 4556788887
Q ss_pred hHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC-Ccceeeec--cccCCCcccceeeeecH--HHHHhhhcc
Q psy8199 442 SIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMTTD--KIYNSIYYK 516 (965)
Q Consensus 442 ~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~-~pDivt~s--K~l~gG~~pig~v~~~~--~i~~~~~~~ 516 (965)
+++|.++|++||+++++|-+|.|+...-..+-....|+ .+|.+++. |.+... ++.|+++.++ .+...+...
T Consensus 258 ---l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P-~~~g~llvr~~~~l~~~~~~~ 333 (490)
T PLN02880 258 ---LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTN-FDCSLLWVKDRNALIQSLSTN 333 (490)
T ss_pred ---HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCC-ccEEEEEEeCHHHHHHHHccC
Confidence 99999999999999999999876422211111123454 58888864 766554 5778888764 222333221
Q ss_pred CCccccc-c-----cCCC--------CCCHHHHHHHHHHHHHHhcccHHHHHH---HHHHHHHHHHHcccCCCceeee-e
Q psy8199 517 NNINIFL-H-----SHSY--------SGNPLACCAALATLEIFNKDNILQRIS---QDMKKITKALTSLITHPKIINF-R 578 (965)
Q Consensus 517 ~~~~~~~-~-----~~t~--------~~~~~~~aaa~a~L~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~~i~~v-~ 578 (965)
. .+. + ..++ .+-.........+|+.+-.+++.++++ ++.+++.+.|++. +.+..+ +
T Consensus 334 ~---~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~---~~~el~~~ 407 (490)
T PLN02880 334 P---EFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQD---SRFEVVTP 407 (490)
T ss_pred H---HHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEecC
Confidence 0 000 0 0000 112222233344566666667777777 7888887777654 444422 2
Q ss_pred ceeEEEEEEEeecCccc---hhhHHHHHHHHHHHcCcEE-ee----cCCEEEEeCCcccC-HHHHHHHHHhhhcc
Q psy8199 579 QKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLL-RP----IGNTVYLMPPYILN-KNEIQHMTSAIFQT 644 (965)
Q Consensus 579 g~G~~~~i~~~~~~~~~---~~~~~~~~~~~l~~~Gi~~-~~----~~~~lR~~p~~~~t-~~~i~~~~~~l~~~ 644 (965)
....++.|.+. ..... .......+.++|.+.|-+. .+ +..++|+++....+ .++++.+++.+.+.
T Consensus 408 ~~~~iv~Fr~~-~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~ 481 (490)
T PLN02880 408 RIFSLVCFRLV-PPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDE 481 (490)
T ss_pred CceEEEEEEEe-CCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 34446666654 11111 1223345677777776543 32 12579998755544 58999988887654
No 483
>PRK14470 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.13 E-value=7e-09 Score=112.41 Aligned_cols=186 Identities=12% Similarity=0.122 Sum_probs=134.8
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC---CCCEEEEeeccCCCCcccHHHHHHHHHHHHhc---
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD---GATRFCMGAAWRELKDRDLDNIENMICEVKKI--- 762 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~---g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~--- 762 (965)
..||+.+|.||...... -.+.++.+||++++....+. .++.+.|.|-+.|+.. .+.+.++++.+++.
T Consensus 104 q~GC~l~C~fC~tg~~g-----~~r~l~~~EI~~qi~~~~~~~~~~i~nIvfmGmGEPllN--~d~v~~~i~~l~~~~~~ 176 (336)
T PRK14470 104 QAGCALGCAFCATGKLG-----LDRSLRSWEIVAQLLAVRADSERPITGVVFMGQGEPFLN--YDEVLRAAYALCDPAGA 176 (336)
T ss_pred CCCcCCCCccccCCCCC-----CCCCCCHHHHHHHHHHHHHhcCCCCCEEEEEecCccccC--HHHHHHHHHHHhCcccc
Confidence 68999999999865421 12347899999988765442 5889999885567544 56777788777741
Q ss_pred ---CcEeEEe-cCCCCHHHHHHHHHhCC-CeEeccCCC-CHHHHhcccCC---CCHHHHHHHHHHHHHcCCcee--eeEE
Q psy8199 763 ---GLETCLT-LGMLNENQAYRLKKVGL-DYYNHNLDT-SPKLYGDIIST---RDYENRLNTLKNVRNVGINIC--CGGI 831 (965)
Q Consensus 763 ---~~~i~~~-~~~~~~e~l~~Lk~aG~-~~i~i~~es-~~~~~~~i~~~---~~~~~~~~~i~~~~~~Gi~v~--~~~i 831 (965)
+..++++ +|. .+ .+++|.+.|. +.+.+++.+ +++.++++.+. .+.++.+++++...+.+-+++ ..+|
T Consensus 177 ~~~~~~ItVsTnG~-~p-~i~~l~~~~~~~~LaiSLhA~~~e~r~~I~p~~~~~~le~il~ai~~~~~~~rri~ieyvLI 254 (336)
T PRK14470 177 RIDGRRISISTAGV-VP-MIRRYTAEGHKFRLCISLNAAIPWKRRALMPIEQGFPLDELVEAIREHAALRGRVTLEYVMI 254 (336)
T ss_pred ccCCCceEEEecCC-hH-HHHHHHhcCCCceEEEecCCCCHHHHHHhcCccccCCHHHHHHHHHHHHHhCCCeEEEEEEE
Confidence 3345543 344 34 4555666665 889999999 99999999763 578999999999888776544 5566
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHH
Q psy8199 832 IGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVAR 890 (965)
Q Consensus 832 ~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R 890 (965)
-|..++.+|+.+..++++.+. ..+.+-+|.|.++ ...+++.+++.+...+.+
T Consensus 255 ~GvNDseeda~~La~llk~l~---~~vnlI~~N~~~~----~~~~p~~~~i~~f~~~l~ 306 (336)
T PRK14470 255 SGVNVGEEDAAALGRLLAGIP---VRLNPIAVNDATG----RYRPPDEDEWNAFRDALA 306 (336)
T ss_pred ecccCCHHHHHHHHHHHhcCC---CeEEEeccCCCCC----CccCCCHHHHHHHHHHHH
Confidence 677899999999999999885 4566666667555 345678888877777664
No 484
>TIGR03821 AblA_like_1 lysine-2,3-aminomutase-related protein. Members of this protein form a distinctive clade, homologous to lysine-2,3-aminomutase (of Bacillus, Clostridium, and methanogenic archaea) and likely similar in function. Members of this family are found in E. coli, Buchnera, Yersinia, etc.
Probab=99.13 E-value=2e-09 Score=116.90 Aligned_cols=192 Identities=17% Similarity=0.220 Sum_probs=134.9
Q ss_pred EeeccCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC-CCCEEEEeeccCCCCccc--HHHHHHHHHHHHh
Q psy8199 685 LSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD-GATRFCMGAAWRELKDRD--LDNIENMICEVKK 761 (965)
Q Consensus 685 i~~~s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~-g~~~i~l~~g~~~~~~~~--~~~~~~~~~~i~~ 761 (965)
+.+ |.+|+.+|.||....... . +. .++.+++.+.+..+.+. +++.|.|+|| +|+...+ +..+++.++.+..
T Consensus 100 ~~~-t~~Cn~~Cr~C~~~~~~~-~--~~-~~~~~~~~~~i~~i~~~~~i~~VvltGG-EPL~~~d~~L~~ll~~l~~i~~ 173 (321)
T TIGR03821 100 LIV-TGGCAINCRYCFRRHFPY-Q--EN-QPNKAQWKEALEYIAQHPEINEVILSGG-DPLMAKDHRLDWLLNLLEQIPH 173 (321)
T ss_pred EEe-CCCcCCcCcCCCCCCcCC-C--CC-CCCHHHHHHHHHHHHhcCCCCEEEEeCc-ccccCCchHHHHHHHHHHhCCC
Confidence 335 999999999997543211 1 11 24556666656666644 8999999886 4655443 4455544444332
Q ss_pred -cCcEeE-----EecCCCCHHHHHHHHHhCCCeEe-ccCCCCHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEE--E
Q psy8199 762 -IGLETC-----LTLGMLNENQAYRLKKVGLDYYN-HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGI--I 832 (965)
Q Consensus 762 -~~~~i~-----~~~~~~~~e~l~~Lk~aG~~~i~-i~~es~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i--~ 832 (965)
..+.+. ..+..++++.++.|+++|...+. +.++..+++. +...++++.++++|+.+..... =
T Consensus 174 ~~~iri~tr~~~~~p~rit~el~~~L~~~~~~~~~~~h~dh~~Ei~---------d~~~~ai~~L~~~Gi~v~~qtvllk 244 (321)
T TIGR03821 174 LKRLRIHTRLPVVIPDRITSGLCDLLANSRLQTVLVVHINHANEID---------AEVADALAKLRNAGITLLNQSVLLR 244 (321)
T ss_pred CcEEEEecCcceeeHHHhhHHHHHHHHhcCCcEEEEeeCCChHhCc---------HHHHHHHHHHHHcCCEEEecceeeC
Confidence 122332 22346789999999999987774 4776654443 4578899999999997764444 4
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q psy8199 833 GLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTS 896 (965)
Q Consensus 833 Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~~lp~~ 896 (965)
|..++.+++.+..+.+.+++ +.-..++.+.|..|+. +-..+.++..+++..+|..++..
T Consensus 245 giNDn~~~l~~L~~~l~~~g--v~pyyl~~~~p~gg~~---~f~v~~~~~~~i~~~l~~~~sG~ 303 (321)
T TIGR03821 245 GVNDNADTLAALSERLFDAG--VLPYYLHLLDKVQGAA---HFDVDDERARALMAELLARLPGY 303 (321)
T ss_pred CCCCCHHHHHHHHHHHHHcC--CeeCcccccCCCCCcc---cccCCHHHHHHHHHHHHHhCCCC
Confidence 66789999999999999999 7777788888888865 24578899999999999888765
No 485
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.12 E-value=8.9e-09 Score=113.95 Aligned_cols=344 Identities=12% Similarity=0.116 Sum_probs=183.0
Q ss_pred cccccccccchhccCCCCCHHHHHH-HHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHH
Q psy8199 254 KRYLDAISSWWVNLFGHSNSYINKA-LKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 332 (965)
Q Consensus 254 ~~ylD~~~~~~~~~lGh~~p~v~~a-v~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~ 332 (965)
..|||+.+-.+. +.+.++ +.. +..+. ....-++...+|.+.+++++ +.+++++++||+.|...+..
T Consensus 38 ~v~iDLltDsgT-------~aMs~~q~a~-~~~GD---e~yag~~s~~~lE~~va~~~--G~~~av~v~sGT~Al~ll~~ 104 (450)
T TIGR02618 38 DVYIDLLTDSGT-------NAMSDKQWAG-LMMGD---EAYAGSRNFYHLERTVRELY--GFKYVVPTHQGRGAENLLSQ 104 (450)
T ss_pred ceEEEcccCCCc-------HHHHHHHHHH-hhhcc---hhhcCCCcHHHHHHHHHHHH--CCCeEEEcCCHHHHHHHHHH
Confidence 478999887653 445444 222 22211 12334566789999999999 57899999999999876532
Q ss_pred HHHHHHHhcCCCCceEEEEEcCCccCCcccc-ccccCCcCccchhcccCCCeeEecCCCC--CCCCCCCChhHH-HHHHH
Q psy8199 333 MSFHYWYNKGFLNKKKFICLQNSYHGETLGA-LAVTNIQSFKEIYTSLLNKTYIITTPDS--RNINKGNSANEI-ARCAI 408 (965)
Q Consensus 333 ~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~d~ 408 (965)
+.. .+++.| .. .+|-.+..+ ....|. .++..+.. .... ..+.+ ...|+
T Consensus 105 l~l--------~pGDeV--ps-n~~f~Tt~ahIe~~Ga--------------v~vDi~~dea~~~~---~~~p~~GniD~ 156 (450)
T TIGR02618 105 IAI--------KPGDYV--PG-NMYFTTTRYHQEKNGA--------------TFVDIIIDEAHDAQ---LNIPFKGNVDL 156 (450)
T ss_pred hCC--------CCcCEE--CC-ceeHHHHHHHHHhCCe--------------EEEeeecccccccc---cCCCCCCCcCH
Confidence 221 234433 33 333222221 222221 11111000 0000 00000 11378
Q ss_pred HHHHHHHHhCC-CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccc----cccCC-
Q psy8199 409 FDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC----EHAEI- 482 (965)
Q Consensus 409 ~~le~~l~~~~-~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~----~~~~~- 482 (965)
++|+++|.+.. ..++.|.++- ..|..|..+.+.+.+++++++|++||+.||.|-++. ||- + .|-- .+.+.
T Consensus 157 ~~Le~aI~~~~~~~~~lV~~e~-t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~gN-A-~~I~~re~g~~~~~ 232 (450)
T TIGR02618 157 KKLQKLIDEVGADKIPYICLAV-TVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRC-VEN-A-YFIKEREQGYEDKS 232 (450)
T ss_pred HHHHHHhccccCcccCceEEEE-ecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccch-hhC-h-hhhhcccccccCCC
Confidence 99999997532 2444555544 345444455678889999999999999999999875 421 0 1100 01111
Q ss_pred ----------CcceeeeccccCCCcccceeeee--cHHHHHhhhccCCcccccccCCCCCCH-HHHHHHHHHHHHHhccc
Q psy8199 483 ----------WPDFLCLSKGITGGYLPLSLVMT--TDKIYNSIYYKNNINIFLHSHSYSGNP-LACCAALATLEIFNKDN 549 (965)
Q Consensus 483 ----------~pDivt~sK~l~gG~~pig~v~~--~~~i~~~~~~~~~~~~~~~~~t~~~~~-~~~aaa~a~L~~~~~~~ 549 (965)
..|. +++|+.-.+..|+|.+++ ++++++..+.- ...+-..-||++=. -.+.|...+|+...+..
T Consensus 233 i~ei~~e~~~~aD~-~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~--~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~ 309 (450)
T TIGR02618 233 IAEILKEMMSYADG-CTMSGKKDCLVNIGGFLCMNDDEMFQSAKEL--VVVFEGMPSYGGLAGRDMEAMAIGIREAVDYE 309 (450)
T ss_pred HHHHHHHHhccCcE-EEEeeccCCCCCCceEEEeCCHHHHHHHHHH--hhhcCCccccCchhhhhHHHHHHHHHHhhhHH
Confidence 2455 444444222258887766 67787766541 00111112444422 23444444565544556
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCcc-chhhH-HHHHHH-HHHHcCcEEee----------
Q psy8199 550 ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPE-QIETF-SKKFFV-AALKNELLLRP---------- 616 (965)
Q Consensus 550 ~~~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~-~~~~~-~~~~~~-~l~~~Gi~~~~---------- 616 (965)
..++.....++|.+.|.+. ..|.+ -+..|.++.++...--++ +...+ +..+.. ..++.||-..-
T Consensus 310 y~~~r~~~a~~La~~L~~~-Gvpv~--~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~ 386 (450)
T TIGR02618 310 YIEHRVKQVRYLGDKLKAA-GVPIV--EPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNN 386 (450)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCccc--CCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCC
Confidence 6777777889999999876 33322 234566666665310011 11111 223333 33466764321
Q ss_pred c--------CCEEEEeCCc-ccCHHHHHHHHHhhhcccccH
Q psy8199 617 I--------GNTVYLMPPY-ILNKNEIQHMTSAIFQTFNEL 648 (965)
Q Consensus 617 ~--------~~~lR~~p~~-~~t~~~i~~~~~~l~~~~~~~ 648 (965)
. -..+|++.|. +.|.++++.+.+++.......
T Consensus 387 ~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 387 VTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred CCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 1 1468887665 558888888888877654443
No 486
>PLN02263 serine decarboxylase
Probab=99.12 E-value=3.4e-08 Score=110.85 Aligned_cols=290 Identities=12% Similarity=0.040 Sum_probs=170.6
Q ss_pred CcHHHHHHHHHHHhhcCCCCC--eEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcCc
Q psy8199 295 THKPVIKLSEKLSSLTQYKLG--HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 372 (965)
Q Consensus 295 ~~~~~~~la~~l~~~~~~~~~--~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 372 (965)
..+...++.+.++++++.+.+ .-++++||||||..|+.+||++. + +.+++....-|-+..-+..+.|
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~------~-~~vvy~S~~aH~Sv~KAa~llg---- 199 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF------P-DGILYASRESHYSVFKAARMYR---- 199 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc------C-CcEEEEcCCccHHHHHHHHhcC----
Confidence 445566788888888864332 36889999999999999999863 2 2355555555555333322222
Q ss_pred cchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy8199 373 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 452 (965)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~ 452 (965)
-+...+|..... . -|+++|+++|.+......+|+..- ...+.|.+-| +++|.++|
T Consensus 200 --------i~~~~Vp~d~~g-~-----------mD~~aL~~aI~~d~~~P~iVvata-GTT~~GAiDp----i~eIa~i~ 254 (470)
T PLN02263 200 --------MECVKVDTLVSG-E-----------IDCADFKAKLLANKDKPAIINVNI-GTTVKGAVDD----LDLVIKTL 254 (470)
T ss_pred --------CcceEeccCCCC-c-----------CcHHHHHHHHHhCCCCcEEEEEEe-cCCCCcCCCC----HHHHHHHH
Confidence 234556653222 1 388999998876543445555544 4556788877 99999999
Q ss_pred HhcCC-----eEEEeccccCCCc----ccccccccccCCCcceeeec--cccCCCcccceeeeecHHHHHhhhccCCccc
Q psy8199 453 NNYNI-----HLIADEIAVGCGR----TGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINI 521 (965)
Q Consensus 453 ~~~g~-----llI~DEv~tg~gr----~G~~~~~~~~~~~pDivt~s--K~l~gG~~pig~v~~~~~i~~~~~~~~~~~~ 521 (965)
++||+ ++++|-++.|+-- .-..+. +....|-++++ |-++.. ++.|.++.+++..+.+.... .
T Consensus 255 ~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~d---f~~~vDSIsvD~HK~l~~P-~~cgvll~R~~~~~~~~~~~---~ 327 (470)
T PLN02263 255 EECGFSQDRFYIHCDGALFGLMMPFVKRAPKVT---FKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNV---E 327 (470)
T ss_pred HHcCCccCCeeEEEeccchhhHhhhcccccccC---CCcCccEEEECCccccCCC-cCEEEEEEehhhHhhhccCh---H
Confidence 99997 9999999987521 100111 11236777775 554444 68888999877655443210 0
Q ss_pred cc--ccCCCCCCH--HHHHHHHHHHHHHhcccHH---HHHHHHHHHHHHHHHcccCCCceeeeeceeEEEEEEEeecCcc
Q psy8199 522 FL--HSHSYSGNP--LACCAALATLEIFNKDNIL---QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPE 594 (965)
Q Consensus 522 ~~--~~~t~~~~~--~~~aaa~a~L~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~~i~~v~g~G~~~~i~~~~~~~~ 594 (965)
+. ...|..+.- ...+..-++|+.+..+++. ++..++.+++.++|++. +...-..+..+.+.|... .
T Consensus 328 Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~---g~~~~~~p~s~~V~f~~p--~-- 400 (470)
T PLN02263 328 YLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA---GISAMLNELSSTVVFERP--K-- 400 (470)
T ss_pred hhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---CCeEEeCCCceEEEEecC--c--
Confidence 00 011222221 2234455666665555544 44445677777777665 221123344444444321 0
Q ss_pred chhhHHHHHHHHHHHcCcEEeecCCEEEEeCCcccCHHHHHHHHHhhhcc
Q psy8199 595 QIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 595 ~~~~~~~~~~~~l~~~Gi~~~~~~~~lR~~p~~~~t~~~i~~~~~~l~~~ 644 (965)
..+..+|..+...++.+++.....++.+.++++++.+.+.
T Consensus 401 ----------~~~~~~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~ 440 (470)
T PLN02263 401 ----------DEEFVRRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEK 440 (470)
T ss_pred ----------hHHhhcceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 1123467766665555666554446778888888776543
No 487
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.12 E-value=4.6e-08 Score=106.56 Aligned_cols=239 Identities=15% Similarity=0.104 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHhhccccccCCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEE
Q psy8199 273 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 352 (965)
Q Consensus 273 p~v~~av~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~ 352 (965)
.+..++|.+.++... .+ .-+...++.+.+++.+ +..+++.++|||.|+..|++++- . .+++.||+.
T Consensus 15 ~~e~~~v~~vl~sg~-i~----~G~~v~~FE~~~ae~~--G~k~ava~~sgT~AL~laL~al~-i------g~GDeVI~p 80 (374)
T COG0399 15 EEELAAVQEVLKSGW-LT----GGPFVRRFEQAFAEYL--GVKYAVAVSSGTAALHLALLALA-I------GPGDEVIVP 80 (374)
T ss_pred hHHHHHHHHHHHcCC-ee----cChHHHHHHHHHHHHh--CCCeEEEecChHHHHHHHHHhcC-C------CCCCEEEec
Confidence 455667777776642 11 2456778999999999 67899999999999999999552 1 467889998
Q ss_pred cCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccc
Q psy8199 353 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQ 432 (965)
Q Consensus 353 ~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~ 432 (965)
.-+|-......+..+.. .+|+........ .|.+.+|++|.+ ++.|||.-
T Consensus 81 s~TfvATan~i~~~Ga~-------------PVFvDid~~T~n-----------id~~~ie~aIt~---~tKAIipV---- 129 (374)
T COG0399 81 SFTFVATANAVLLVGAK-------------PVFVDIDPDTLN-----------IDPDLIEAAITP---RTKAIIPV---- 129 (374)
T ss_pred CCchHHHHHHHHHcCCe-------------EEEEecCCcccC-----------CCHHHHHHHccc---CCeEEEEe----
Confidence 87775553333333332 233332211111 378999999963 35665552
Q ss_pred cCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec----cccCCCcccceeeeec-H
Q psy8199 433 CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTT-D 507 (965)
Q Consensus 433 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s----K~l~gG~~pig~v~~~-~ 507 (965)
+-.|.... +++|.++|++||++||-|-+|+ +|-+ +--...|---|+.+|| |.|+.| =-|+++.+ +
T Consensus 130 hl~G~~~d----m~~i~~la~~~~l~vIEDaAqa-~Ga~---y~gk~vGt~Gd~~~fSF~~~K~ittg--EGGav~tnd~ 199 (374)
T COG0399 130 HLAGQPCD----MDAIMALAKRHGLPVIEDAAQA-HGAT---YKGKKVGSFGDIGAFSFHATKNLTTG--EGGAVVTNDE 199 (374)
T ss_pred hhccCCCC----HHHHHHHHHHcCCeEEEEcchh-ccCe---ecCcccccccceEEEEecCCCCcccc--CceEEEeCCH
Confidence 22454444 8999999999999999999996 6533 1111223334677765 888654 23667765 4
Q ss_pred HHHHhhhc---cCCcc-------cccccCCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcc
Q psy8199 508 KIYNSIYY---KNNIN-------IFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL 568 (965)
Q Consensus 508 ~i~~~~~~---~~~~~-------~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l 568 (965)
++++.++. .|... ....|..+.-+-+.+|.+++-|+.++ ++.++-++..++..+.|+++
T Consensus 200 ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~--~~~~~R~~~a~~Y~~~l~~~ 268 (374)
T COG0399 200 ELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLD--EINERRREIAQIYAEALKGL 268 (374)
T ss_pred HHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhcC
Confidence 56554432 22211 12234444455666666667676553 46677777788888888766
No 488
>TIGR00048 radical SAM enzyme, Cfr family. A Staphylococcus sciuri plasmid-borne member of this family, Cfr, has been identified as essential to transferrable resistance to chloramphenicol and florfenicol by an unknown mechanism. A 14-15 residue cluster with four perfectly conserved Cys residues suggests this protein may be an enzyme with an iron-sulfur cluster. The Cys cluster is part of the radical SAM domain, suggested to provide a general mechanism by which the Fe-S center cleaves S-adenosylmethionine to initiate radical-based catalysis. Members of this family lack apparent transmembrane domains.
Probab=99.11 E-value=8.3e-09 Score=113.24 Aligned_cols=188 Identities=13% Similarity=0.188 Sum_probs=136.1
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH------CCCCEEEEeeccCCCCcccHHHHHHHHHHHHh-
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS------DGATRFCMGAAWRELKDRDLDNIENMICEVKK- 761 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~------~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~- 761 (965)
..||+.+|.||..... + ..+.++.+||++++..... .+++.|.+.|.++|+.. ++.+.++++.+++
T Consensus 112 Q~GC~l~C~fC~t~~~---g--~~r~lt~~Eiv~qv~~~~~~~~~~~~~v~nVvfmGmGEPLln--~d~v~~~l~~l~~~ 184 (355)
T TIGR00048 112 QVGCALGCTFCATAKG---G--FNRNLEASEIIGQVLRVQKINNETGERVSNVVFMGMGEPLLN--LNEVVKAMEIMNDD 184 (355)
T ss_pred CCCCCCcCCCCCCCCC---C--CCCCCCHHHHHHHHHHHHHHhhhcCCCeeEEEEecCCchhhC--HHHHHHHHHHhhcc
Confidence 5789999999985432 1 1245899999998765432 24777889886677554 7788888888874
Q ss_pred cC--c---EeEE-ecCCCCHHHHHHHHHhCCC-eEeccCCC-CHHHHhcccC---CCCHHHHHHHHHH-HHHcCCcee--
Q psy8199 762 IG--L---ETCL-TLGMLNENQAYRLKKVGLD-YYNHNLDT-SPKLYGDIIS---TRDYENRLNTLKN-VRNVGINIC-- 827 (965)
Q Consensus 762 ~~--~---~i~~-~~~~~~~e~l~~Lk~aG~~-~i~i~~es-~~~~~~~i~~---~~~~~~~~~~i~~-~~~~Gi~v~-- 827 (965)
.+ + .+++ +.|.. ..++.|.+.+++ .+.+++.+ +++.++++.+ ..+.++.+++++. +++.|.+++
T Consensus 185 ~g~~i~~~~itisT~G~~--~~i~~l~~~~l~~~LaiSL~a~~~e~r~~l~p~~~~~~l~~ll~~l~~~~~~~g~~Vtie 262 (355)
T TIGR00048 185 FGLGISKRRITISTSGVV--PKIDILADKMLQVALAISLHAPNDELRSSLMPINKKYNIETLLAAVRRYLNKTGRRVTFE 262 (355)
T ss_pred cccCcCCCeEEEECCCch--HHHHHHHHhCCCcEEEEEeCCCCHHHHHHhcCcccCCCHHHHHHHHHHHHHHhCCEEEEE
Confidence 33 3 4555 34543 578888888887 57899999 8999999875 3468999988875 566787665
Q ss_pred eeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 828 CGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 828 ~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
.-+|-|+.++.+++.+..++++.++ ..|.+.+|.|.++..+ .+++.+++.+...+++.
T Consensus 263 yvLI~GvNDs~e~a~~La~llk~l~---~~VnLIPynp~~~~~~---~~ps~e~i~~f~~~L~~ 320 (355)
T TIGR00048 263 YVLLDGVNDQVEHAEELAELLKGTK---CKVNLIPWNPFPEADY---ERPSNEQIDRFAKTLMS 320 (355)
T ss_pred EEEECCCCCCHHHHHHHHHHHhcCC---CceEEEecccCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 4455566799999999999999986 4577777777766543 45677777776655543
No 489
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.10 E-value=5.4e-09 Score=116.55 Aligned_cols=314 Identities=11% Similarity=0.036 Sum_probs=177.9
Q ss_pred CCHHHHHHHHHHHhhc-----cccccCCCCc---HHHHHHHHHHHhhcCC-CCCeE-EEcCChhHHHHHHHHHHHHHHHh
Q psy8199 271 SNSYINKALKNQLNKL-----EHVMLSNLTH---KPVIKLSEKLSSLTQY-KLGHC-FYGSDGASAVEVALKMSFHYWYN 340 (965)
Q Consensus 271 ~~p~v~~av~~~~~~~-----~~~~~~~~~~---~~~~~la~~l~~~~~~-~~~~v-~~~~sGseA~~~Al~~a~~~~~~ 340 (965)
.+++|++|+...+.+. +....+.... +...+..+.++++++. ...+| +++.||+.|+|+++.-...
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~---- 89 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG---- 89 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC----
Confidence 4789999998876432 1111112222 5667788888888863 22345 4568899999999875533
Q ss_pred cCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHH-HHHhCC
Q psy8199 341 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI-LLKKNH 419 (965)
Q Consensus 341 ~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~-~l~~~~ 419 (965)
+++++++...+..|....-+. ...... ..+..+...+. .+..++++ .+++
T Consensus 90 ----~g~~~l~i~~G~fg~r~~~~a-----------~~~g~~-~~~~~~~~~g~-----------~~~~~~~~~~l~~-- 140 (360)
T PRK05355 90 ----GGKKADYVDTGSWSKKAIKEA-----------KKYGEV-NVAASSEDDGF-----------TYIPPLDEWQLSD-- 140 (360)
T ss_pred ----CCCeEEEEECCHHHHHHHHHH-----------HHhCCc-eEEecccccCC-----------CCCCChhhccCCC--
Confidence 345666665555554321111 001111 12222110110 12223333 4433
Q ss_pred CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec--cccCCCc
Q psy8199 420 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGY 497 (965)
Q Consensus 420 ~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~gG~ 497 (965)
++.+|.+-- .-+++|+..++ +++| ||+++|+|-|++ +|. .....+.+ |++++| |+++ .
T Consensus 141 -~~~~V~~th-~eTstGv~~~~---i~~i------~g~l~vVDavss-~g~--~~idv~~~----d~~~~ssqK~lg--P 200 (360)
T PRK05355 141 -DAAYVHYTS-NETIDGTEFHE---LPDT------GDVPLVADMSSD-ILS--RPIDVSKF----GLIYAGAQKNIG--P 200 (360)
T ss_pred -CCCEEEEcc-CCCcceEecCc---cccc------CCCcEEEEcCcc-ccC--ccCCHHHc----cEEEEecccccc--C
Confidence 233344433 34567877632 4443 899999999997 542 22333322 577776 7773 3
Q ss_pred ccceeeeecHHHHHhhhccCCc----cc-ccccCC-CCCCHHHHHHHHHHHHHHhcc-c---HHHHHHHHHHHHHHHHHc
Q psy8199 498 LPLSLVMTTDKIYNSIYYKNNI----NI-FLHSHS-YSGNPLACCAALATLEIFNKD-N---ILQRISQDMKKITKALTS 567 (965)
Q Consensus 498 ~pig~v~~~~~i~~~~~~~~~~----~~-~~~~~t-~~~~~~~~aaa~a~L~~~~~~-~---~~~~~~~~~~~l~~~L~~ 567 (965)
..+|.+++++++++.+....+. .. .....+ ++.|-....+..++|+.+.+. + +.++.+++.+++++.|++
T Consensus 201 ~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~ 280 (360)
T PRK05355 201 AGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDS 280 (360)
T ss_pred CceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh
Confidence 4589999999988765431000 00 011112 334555777778899988765 3 556666777777777776
Q ss_pred ccCCCcee--eeeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec---CCEEEEeCCcccCHHHHHHHHHhhh
Q psy8199 568 LITHPKII--NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHMTSAIF 642 (965)
Q Consensus 568 l~~~~~i~--~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~~~~t~~~i~~~~~~l~ 642 (965)
+.-...+. ..+ .+....|.+. +. .....+...+.++|+.+.+. .+.+|+++....+.+|++.+++.+.
T Consensus 281 ~~~~~~~~~~~~r-s~~v~sf~~~--~~----~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~ 353 (360)
T PRK05355 281 SDFYRNPVAPEDR-SRMNVPFTLA--DE----ELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMK 353 (360)
T ss_pred CCCcccCCChhhc-CCcEEEEEcC--Ch----HHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHH
Confidence 52100001 112 1244555543 21 12245667888999998554 2689999999999999999999887
Q ss_pred cc
Q psy8199 643 QT 644 (965)
Q Consensus 643 ~~ 644 (965)
+.
T Consensus 354 ~~ 355 (360)
T PRK05355 354 EF 355 (360)
T ss_pred HH
Confidence 64
No 490
>PRK13745 anaerobic sulfatase-maturase; Provisional
Probab=99.10 E-value=7.4e-09 Score=117.59 Aligned_cols=180 Identities=8% Similarity=0.110 Sum_probs=125.2
Q ss_pred eEeEeeccCCCCCCCCCCCCCCcCCC-CcccccCCCHHHHHHHHHHHHHC-CCCEE--EEeeccCCCCccc--HHHHHHH
Q psy8199 682 AVLLSIKTGGCTEDCGYCPQSTHYNT-EITATKILSIESVITAAQKAKSD-GATRF--CMGAAWRELKDRD--LDNIENM 755 (965)
Q Consensus 682 ~~~i~~~s~~C~~~C~fC~~~~~~~~-~~~~~~~~~~eei~~~~~~~~~~-g~~~i--~l~~g~~~~~~~~--~~~~~~~ 755 (965)
...+..++..|+.+|.||........ .......++.+.+.+.++++.+. +...+ .++|| +|+.... +..++++
T Consensus 14 ~~~~kp~~~~CNl~C~yC~~~~~~~~~~~~~~~~ms~e~~~~~i~~~~~~~~~~~v~i~f~GG-EPlL~~~~~~~~~~~~ 92 (412)
T PRK13745 14 YIMLKPVGAVCNLACDYCYYLEKSKLYQENPKHVMSDELLEKFIKEYINSQTMPQVLFTWHGG-ETLMRPLSFYKKALEL 92 (412)
T ss_pred EEEEeecCCCcCCCCcccCCcCCCcccccCccCCCCHHHHHHHHHHHHHcCCCCeEEEEEEcc-ccCCCcHHHHHHHHHH
Confidence 34445435799999999986432110 00112348999999888887764 55554 44555 4655432 2334444
Q ss_pred HHHHH-hcCcE--eEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhcccC----CCCHHHHHHHHHHHHHcCCceee
Q psy8199 756 ICEVK-KIGLE--TCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIIS----TRDYENRLNTLKNVRNVGINICC 828 (965)
Q Consensus 756 ~~~i~-~~~~~--i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~----~~~~~~~~~~i~~~~~~Gi~v~~ 828 (965)
++... ..++. +.+|...++++.++.|++.++ .+.+++|+.++++...++ ..++++.+++++.+++.|+.+.+
T Consensus 93 ~~~~~~~~~i~~~i~TNG~ll~~e~~~~l~~~~~-~v~ISlDG~~~~hD~~R~~~~g~gsf~~v~~~i~~l~~~gi~~~i 171 (412)
T PRK13745 93 QKKYARGRQIDNCIQTNGTLLTDEWCEFFRENNF-LVGVSIDGPQEFHDEYRKNKMGKPSFVKVMKGINLLKKHGVEWNA 171 (412)
T ss_pred HHHHcCCCceEEEEeecCEeCCHHHHHHHHHcCe-EEEEEecCCHHHhhhhcCCCCCCccHHHHHHHHHHHHHcCCCEEE
Confidence 43222 23444 455777889999999999997 999999997777776663 35899999999999999998765
Q ss_pred eEEEecCCCHHHHHHHHHHHHhcCCCCCceeecccccc
Q psy8199 829 GGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQI 866 (965)
Q Consensus 829 ~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~ 866 (965)
...+ ..++.++..+.++++.+++ ...+.+.+++|.
T Consensus 172 ~~vv-~~~n~~~~~e~~~~~~~lg--~~~~~~~p~~~~ 206 (412)
T PRK13745 172 MAVV-NDFNADYPLDFYHFFKELD--CHYIQFAPIVER 206 (412)
T ss_pred EEEE-cCCccccHHHHHHHHHHcC--CCeEEEEeccCc
Confidence 4443 3577788888999999999 888888888873
No 491
>PRK14462 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.09 E-value=9.4e-09 Score=111.66 Aligned_cols=188 Identities=14% Similarity=0.209 Sum_probs=139.6
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC------CCCEEEEeeccCCCCcccHHHHHHHHHHHHh-
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD------GATRFCMGAAWRELKDRDLDNIENMICEVKK- 761 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~------g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~- 761 (965)
-.||+.+|.||..... + ..+.++++||++++...... ....+.+.|++.|+.. ++.+.++++.+++
T Consensus 117 QvGC~~~C~FCatg~~-g----~~RnLt~~EIv~QV~~~~~~~~~~~~~~~~vVfmGmGEPL~N--~d~v~~~l~~l~~~ 189 (356)
T PRK14462 117 QVGCKVGCAFCLTAKG-G----FVRNLSAGEIVGQILWIKKDNNIPYEKRVNIVYMGMGEPLDN--LDNVSKAIKIFSEN 189 (356)
T ss_pred cccCCCCCccCCCCCC-C----CcccCCHHHHHHHHHHHHHhhhccccccCCeEEeCCcccccC--HHHHHHHHHHhcCc
Confidence 4799999999975532 1 12458999999999755442 2567888888778554 7889999999997
Q ss_pred cCcE-----eEEe-cCCCCHHHHHHHHHhCC-CeEeccCCC-CHHHHhcccC---CCCHHHHHHHHH-HHHHcCCcee--
Q psy8199 762 IGLE-----TCLT-LGMLNENQAYRLKKVGL-DYYNHNLDT-SPKLYGDIIS---TRDYENRLNTLK-NVRNVGINIC-- 827 (965)
Q Consensus 762 ~~~~-----i~~~-~~~~~~e~l~~Lk~aG~-~~i~i~~es-~~~~~~~i~~---~~~~~~~~~~i~-~~~~~Gi~v~-- 827 (965)
.|+. ++++ .|.. +.+++|.+.++ -.+.+++-+ +++.++++.+ ..+.++.+++++ .+.+.|-+++
T Consensus 190 ~Gl~~~~r~itVsTsG~~--~~i~~L~~~dl~v~LaiSLha~d~e~r~~l~pv~~~~~l~~ll~~l~~y~~~~~~~i~ie 267 (356)
T PRK14462 190 DGLAISPRRQTISTSGLA--SKIKKLGEMNLGVQLAISLHAVDDELRSELMPINKAYNIESIIDAVRKFPIDQRKRVMFE 267 (356)
T ss_pred cCCCcCCCceEEECCCCh--HHHHHHHhcCCCeEEEEECCCCCHHHHHHhCCCCccCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 4663 3553 3444 46777887765 456678999 8999999987 235688999887 4556776555
Q ss_pred eeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 828 CGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 828 ~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
.-+|-|..++.|++..++++++.++ ..|.+-+|.|.++.++ ++++.+++.+...+++.
T Consensus 268 yvLI~GvNDs~e~a~~La~llk~l~---~~VnLIPyn~~~~~~~---~~ps~e~i~~f~~~l~~ 325 (356)
T PRK14462 268 YLVIKDVNDDLKSAKKLVKLLNGIK---AKVNLILFNPHEGSKF---ERPSLEDMIKFQDYLNS 325 (356)
T ss_pred EEEECCCCCCHHHHHHHHHHHhhcC---cEEEEEeCCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 5666677899999999999999986 5788888888877654 56788887777666655
No 492
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.08 E-value=9.7e-09 Score=114.79 Aligned_cols=311 Identities=12% Similarity=0.080 Sum_probs=174.3
Q ss_pred CHHHHHHHHHHHhhcc-ccccCCCCcHHHHHHHHHHHhhcCCC-CCeEEEc-CChhHHHHHHHHHHHHHHHhcCCCCceE
Q psy8199 272 NSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYG-SDGASAVEVALKMSFHYWYNKGFLNKKK 348 (965)
Q Consensus 272 ~p~v~~av~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~~~-~~~v~~~-~sGseA~~~Al~~a~~~~~~~g~~~~~~ 348 (965)
+|+|.+|+..+..... ..+......+...+..+.++++++.. ..+|+|+ +|||.|++.++..... + +
T Consensus 15 ~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~--------~--~ 84 (361)
T TIGR01366 15 RLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIE--------K--K 84 (361)
T ss_pred CHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhccc--------c--c
Confidence 6888888765422211 11222333556677788888888743 3378885 7799999999875521 2 2
Q ss_pred EEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEc
Q psy8199 349 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 428 (965)
Q Consensus 349 vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~e 428 (965)
.+....+.+|....-.+... +....+..++.+... .++..+ .+++..|.+.
T Consensus 85 ~l~i~~G~~~~~~~~~a~~~---------~~~~~~~~~~~~~~~-----------------~~~~~~---~~~~~lV~~~ 135 (361)
T TIGR01366 85 SLHLSFGEFSSKFAKAVKLA---------PWLGEPIIVTADPGS-----------------APEPQA---DPGVDVIAWA 135 (361)
T ss_pred ccEEecCHHHHHHHHHHHhh---------hccCCceEEecCCCC-----------------CCCCcc---CCCCCEEEEc
Confidence 33333344454222222110 000122333332110 111111 2355666666
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeec--cccCCCcccceeeeec
Q psy8199 429 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT 506 (965)
Q Consensus 429 p~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~gG~~pig~v~~~ 506 (965)
- ..+.+|.+.| ++ ++++++|+++|+|-+++ +|.. ....+ . .|++++| |++++- -.++.++.+
T Consensus 136 h-~et~tG~~~p----i~---~I~~~~g~~~iVDavqs-~g~~--~idv~--~--~D~~~~s~~K~lg~~-~Gl~~~~~s 199 (361)
T TIGR01366 136 H-NETSTGVAVP----VR---RPEGSDDALVVIDATSG-AGGL--PVDIA--E--TDVYYFAPQKNFASD-GGLWLAIMS 199 (361)
T ss_pred c-cCCccceecc----cc---cccccCCCeEEEEcCcc-ccCC--CCCHH--H--CCEEEEEchhhcCCC-CceEEEEEC
Confidence 5 6678899887 43 44789999999999997 5421 22222 1 5888886 777652 124455668
Q ss_pred HHHHHhhhcc---CCc-ccc----------cccCCCCCCHH-HHHHHHHHHHHHhcc-c---HHHHHHHHHHHHHHHHHc
Q psy8199 507 DKIYNSIYYK---NNI-NIF----------LHSHSYSGNPL-ACCAALATLEIFNKD-N---ILQRISQDMKKITKALTS 567 (965)
Q Consensus 507 ~~i~~~~~~~---~~~-~~~----------~~~~t~~~~~~-~~aaa~a~L~~~~~~-~---~~~~~~~~~~~l~~~L~~ 567 (965)
+++++.+... +.. ..+ ..+.|.+..++ .+.+..++|+.+.+. + ..++.+++.+++++.|.+
T Consensus 200 ~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~ 279 (361)
T TIGR01366 200 PAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQE 279 (361)
T ss_pred HHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh
Confidence 8777655421 000 001 01244444444 444677888887654 2 346667777778888877
Q ss_pred ccCC-Cceee--eeceeEEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec-----CCEEEEeCCcccCHHHHHHHHH
Q psy8199 568 LITH-PKIIN--FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTS 639 (965)
Q Consensus 568 l~~~-~~i~~--v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~lR~~p~~~~t~~~i~~~~~ 639 (965)
+... +.+.. .+. .....+.+. ++. ....+.+.|.++||.+.+. ++.+|++.....+.++++++++
T Consensus 280 ~~~~~~~~~~~~~~s-~~v~~v~~~--~g~----~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~ 352 (361)
T TIGR01366 280 RPYATPFVTDPGKRS-QVVGTIDFV--DDI----DAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTE 352 (361)
T ss_pred CCCcccCCCChhhcc-cceEEEECC--Ccc----CHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHH
Confidence 6321 11111 111 111222222 211 1345777888899988753 3579999999999999999999
Q ss_pred hhhcc
Q psy8199 640 AIFQT 644 (965)
Q Consensus 640 ~l~~~ 644 (965)
++.+.
T Consensus 353 al~~~ 357 (361)
T TIGR01366 353 CVDWV 357 (361)
T ss_pred HHHHH
Confidence 98764
No 493
>PRK14467 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.07 E-value=1.3e-08 Score=110.81 Aligned_cols=189 Identities=15% Similarity=0.206 Sum_probs=133.6
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHH----CCCCEEEEeeccCCCCcccHHHHHHHHHHHHh-cC
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS----DGATRFCMGAAWRELKDRDLDNIENMICEVKK-IG 763 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~----~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~-~~ 763 (965)
+.||+.+|.||..... + -.+.++.+||++++..... .++..|.+.|.+.|+.. ++.+.++++.+++ .|
T Consensus 106 q~GC~l~C~FC~t~~~-G----~~rnlt~~EIv~Qv~~~~~~~~~~~v~~VvfmGmGEPL~N--~d~v~~~l~~l~~~~g 178 (348)
T PRK14467 106 QVGCAVGCKFCATAKD-G----LIRNLRTAEIIDQYIQVQKFLGENRIRNVVFMGMGEPLAN--YENVRKAVQIMTSPWG 178 (348)
T ss_pred CCCCCCcCcCCCCCCC-C----CcCCCCHHHHHHHHHHHHHHhccCCCCeEEEEccChhhcC--HHHHHHHHHHHcChhc
Confidence 7999999999986532 1 1245899999999876554 25788999885667544 7899999999975 56
Q ss_pred c-----EeEEe-cCCCCHHHHHHHHHh----CCCeEeccCCC-CHHHHhcccCC---CCHHHHHHHHHHH-HHcCCcee-
Q psy8199 764 L-----ETCLT-LGMLNENQAYRLKKV----GLDYYNHNLDT-SPKLYGDIIST---RDYENRLNTLKNV-RNVGINIC- 827 (965)
Q Consensus 764 ~-----~i~~~-~~~~~~e~l~~Lk~a----G~~~i~i~~es-~~~~~~~i~~~---~~~~~~~~~i~~~-~~~Gi~v~- 827 (965)
+ +++++ .|.. ..++++... .+ .+.+++.+ +++.++++.+. .+.++.+++++.. ++.|-+++
T Consensus 179 l~~~~r~itvsT~G~~--~~i~~l~~~~~l~~v-~LalSLha~~~e~r~~i~p~~~~~~l~~l~~~~~~~~~~~g~~V~i 255 (348)
T PRK14467 179 LDLSKRRITISTSGII--HQIKRMAEDPVMPEV-NLAVSLNASSQKLRERIMPISKTNTLEELMEVLKQYPLPPGRRIML 255 (348)
T ss_pred cCcCCCcEEEECCCCh--hHHHHHHhhccccCe-eEEEECCCCCHHHHHHhcCCccccCHHHHHHHHHHHHHhcCCeEEE
Confidence 6 55553 3443 224444432 34 34589999 89999999974 3677777777653 36676655
Q ss_pred -eeEEEecCCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 828 -CGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 828 -~~~i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
.-+|-|..++.+++.+..++++.++. ...|.+.+|.|.++.+ .++++.+++.+...+++.
T Consensus 256 eyvLIpGvNDs~e~a~~La~~l~~l~~-~~~VnLIPynp~~~~~---~~~ps~e~i~~f~~~L~~ 316 (348)
T PRK14467 256 EYVLIKGVNDSPEDALRLAQLIGKNKK-KFKVNLIPFNPDPELP---YERPELERVYKFQKILWD 316 (348)
T ss_pred EEEEECCccCCHHHHHHHHHHHhcCCC-ceEEEEecCCCCCCCC---CCCCCHHHHHHHHHHHHH
Confidence 45555667999999999999998741 4567777777777664 466788877776666554
No 494
>PRK14466 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=99.06 E-value=2.2e-08 Score=107.73 Aligned_cols=189 Identities=15% Similarity=0.145 Sum_probs=136.0
Q ss_pred cCCCCCCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC-CCCEEEEeeccCCCCcccHHHHHHHHHHHHh-cCc--
Q psy8199 689 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD-GATRFCMGAAWRELKDRDLDNIENMICEVKK-IGL-- 764 (965)
Q Consensus 689 s~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~-g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~-~~~-- 764 (965)
.-||+.+|.||..... +. .+.++.+||++++....+. ++..|.|.|-+.|+ ..++.+++.++.+++ .++
T Consensus 110 QvGC~~~C~FC~Tg~~---g~--~rnLt~~EIl~Qv~~~~~~~~i~nIvfmGmGEPL--~N~d~vi~al~~l~~~~g~~~ 182 (345)
T PRK14466 110 QVGCKMNCLFCMTGKQ---GF--TGNLTAAQILNQIYSLPERDKLTNLVFMGMGEPL--DNLDEVLKALEILTAPYGYGW 182 (345)
T ss_pred CCCCCCCCCCCCCCCC---CC--CCCCCHHHHHHHHHhhhhcCCCCeEEEeeeCcCc--ccHHHHHHHHHHHhhccccCc
Confidence 5799999999985432 11 1348999999999877543 68999998855575 457888888888875 343
Q ss_pred ---EeEEecCCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCC---CCHHHHHHHHHHHH-HcCCc--eeeeEEEec
Q psy8199 765 ---ETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIST---RDYENRLNTLKNVR-NVGIN--ICCGGIIGL 834 (965)
Q Consensus 765 ---~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~---~~~~~~~~~i~~~~-~~Gi~--v~~~~i~Gl 834 (965)
.++++..-..+..-+.+.+. -..+.+++.+ +++.++++.+. .+.++.+++++... +.|-+ +...+|=|.
T Consensus 183 s~r~ItVsT~G~~~~i~~l~~~~-~~~LavSLha~~~e~R~~i~P~~~~~~l~~l~~al~~y~~~~~rri~~Ey~Li~gv 261 (345)
T PRK14466 183 SPKRITVSTVGLKKGLKRFLEES-ECHLAISLHSPFPEQRRELMPAEKAFSIKEIIDLLKNYDFSKQRRVSFEYIVFKGL 261 (345)
T ss_pred CCceEEEEcCCCchHHHHHhhcc-CcEEEEEcCCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHhhCCEEEEEEEEeCCC
Confidence 45543322334333333333 3567899999 99999999874 46899999988843 34434 445666677
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8199 835 SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARI 891 (965)
Q Consensus 835 ~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT~l~~~~~~~~~~~~~~ia~~R~ 891 (965)
+++.||..+..++++.++ ..|.+.+|.|.|+.+ ..+++.+.+.+...+.+.
T Consensus 262 ND~~e~a~~L~~ll~~~~---~~VNLIp~Np~~~~~---~~~~s~~~~~~F~~~L~~ 312 (345)
T PRK14466 262 NDSLKHAKELVKLLRGID---CRVNLIRFHAIPGVD---LEGSDMARMEAFRDYLTS 312 (345)
T ss_pred CCCHHHHHHHHHHHcCCC---ceEEEEecCCCCCCC---CcCCCHHHHHHHHHHHHH
Confidence 899999999999999886 778999999998863 455677777777666665
No 495
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=99.06 E-value=1.4e-08 Score=112.39 Aligned_cols=187 Identities=16% Similarity=0.218 Sum_probs=135.7
Q ss_pred cCCCC---CCCCCCCCCCcCCCCcccccCCCHHHHHHHHHHHHHC---CCCEEEEeeccCCCCcccHHHHHHHHHHHHhc
Q psy8199 689 TGGCT---EDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD---GATRFCMGAAWRELKDRDLDNIENMICEVKKI 762 (965)
Q Consensus 689 s~~C~---~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~---g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~~ 762 (965)
-..|. .+|.||..... . ...+.++++|+++++.+.... ....+.+.||+.++.. +++.++++.+++.
T Consensus 29 c~~C~~~~~~C~yC~~~~~---e-~~g~~~t~~evl~ev~~d~~~~~~~~ggVtisGGGepl~~---~~l~eLl~~lk~~ 101 (404)
T TIGR03278 29 CKNCPPGTKGCDYCTRSVW---E-INGDFIPPQVVLGEVQTSLGFRTGRDTKVTISGGGDVSCY---PELEELTKGLSDL 101 (404)
T ss_pred CCcCCCCCCCCCCCCchhh---h-hcCCcCCHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC---HHHHHHHHHHHhC
Confidence 45663 37777753321 1 123458999999999886652 3578899888877554 6788888888887
Q ss_pred CcEeEE--ec--CCCCHHHHHHHHHhCCCeEeccCCC-CHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEecCCC
Q psy8199 763 GLETCL--TL--GMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSES 837 (965)
Q Consensus 763 ~~~i~~--~~--~~~~~e~l~~Lk~aG~~~i~i~~es-~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl~et 837 (965)
++.+++ ++ +..+++.+++|++.|++.+.+++.+ +++.++++.+....+..++.++.+.+ ++.+...+++=.|-+
T Consensus 102 gi~taI~~TnG~~l~~~e~~~~L~~~gld~v~iSvka~dpe~h~kl~G~~~a~~ILe~L~~L~e-~~~v~~~ivlIPGiN 180 (404)
T TIGR03278 102 GLPIHLGYTSGKGFDDPEIAEFLIDNGVREVSFTVFATDPELRREWMKDPTPEASLQCLRRFCE-SCEVHAASVIIPGVN 180 (404)
T ss_pred CCCEEEeCCCCcccCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHhCCCCHHHHHHHHHHHHh-cCCEEEEEEEeCCcc
Confidence 766654 44 4569999999999999999999999 99999998887777999999999998 566554444434433
Q ss_pred H-HHHHHHHHHHHhcCCCCCceeeccccccCC-------CCCC-CCCCCCHHHHHHH
Q psy8199 838 R-DQRAELIFQLANLNPYPESVPINNLVQIKG-------TPLY-GSSILDPLEFIRT 885 (965)
Q Consensus 838 ~-ed~~~~l~~l~~l~~~~~~i~~~~~~P~~g-------T~l~-~~~~~~~~~~~~~ 885 (965)
+ ++..++++++.+++ +..+.+.+|.+... .++. +..+.+.+++.+.
T Consensus 181 D~eel~~ti~~L~~lg--~~~V~L~~y~~~g~~ky~lg~~~~~~~~~~~~~~e~~~~ 235 (404)
T TIGR03278 181 DGDVLWKTCADLESWG--AKALILMRFANTEEQGLILGNAPIIPGIKPHTVSEFKNI 235 (404)
T ss_pred CcHHHHHHHHHHHHCC--CCEEEEEecccccccccccCCcCcccCCCCCCHHHHHHH
Confidence 3 44469999999999 88888888875321 1222 2455677777766
No 496
>PRK13758 anaerobic sulfatase-maturase; Provisional
Probab=99.06 E-value=1.4e-08 Score=114.58 Aligned_cols=195 Identities=12% Similarity=0.171 Sum_probs=128.1
Q ss_pred EeeccCCCCCCCCCCCCCCcCCC-CcccccCCCHHHHHHHHHHHHHC--CCCEEEEeeccCCCCcccHHHHHHHHHHHHh
Q psy8199 685 LSIKTGGCTEDCGYCPQSTHYNT-EITATKILSIESVITAAQKAKSD--GATRFCMGAAWRELKDRDLDNIENMICEVKK 761 (965)
Q Consensus 685 i~~~s~~C~~~C~fC~~~~~~~~-~~~~~~~~~~eei~~~~~~~~~~--g~~~i~l~~g~~~~~~~~~~~~~~~~~~i~~ 761 (965)
+..+|..|+.+|.||........ .......++.+.+.+.++.+.+. +...|.++||+ |+.. +.+.+.++++.+++
T Consensus 8 ~~~~t~~CNl~C~yC~~~~~~~~~~~~~~~~m~~~~~~~~i~~~~~~~~~~~~i~~~GGE-Pll~-~~~~~~~~~~~~~~ 85 (370)
T PRK13758 8 IKPASSGCNLKCTYCFYHSLSDNRNVKSYGIMRDEVLESMVKRVLNEAEGHCSFAFQGGE-PTLA-GLEFFEELMELQRK 85 (370)
T ss_pred EecCCCCcCCCCcccCCcCccccccccccCCCCHHHHHHHHHHHHhccCCceEEEEECCc-cccC-ChHHHHHHHHHHHH
Confidence 33325899999999976532111 11122347777777777665554 34567777664 5443 23444455555554
Q ss_pred cC---c----EeEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhcccC----CCCHHHHHHHHHHHHHcCCceeeeE
Q psy8199 762 IG---L----ETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIIS----TRDYENRLNTLKNVRNVGINICCGG 830 (965)
Q Consensus 762 ~~---~----~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~----~~~~~~~~~~i~~~~~~Gi~v~~~~ 830 (965)
.+ + .+.+|...++++.++.|++.|+ .+.+++++.++.+...++ ..+++..+++++.+++.|+++...+
T Consensus 86 ~~~~~~~~~~~i~TNG~ll~~~~~~~l~~~~~-~v~iSlDg~~~~hd~~R~~~~g~~~f~~v~~~i~~l~~~~~~~~i~~ 164 (370)
T PRK13758 86 HNYKNLKIYNSLQTNGTLIDESWAKFLSENKF-LVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILC 164 (370)
T ss_pred hccCCCeEEEEEEecCEecCHHHHHHHHHcCc-eEEEeecCCHHHhccccCCCCCCccHHHHHHHHHHHHHhCCCceEEE
Confidence 32 2 4566777889999999999987 899999997777877763 5689999999999999999887766
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCceeecc-ccccCC-CCCCCCCCCCHHHHHHHH
Q psy8199 831 IIGLSESRDQRAELIFQLANLNPYPESVPINN-LVQIKG-TPLYGSSILDPLEFIRTI 886 (965)
Q Consensus 831 i~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~-~~P~~g-T~l~~~~~~~~~~~~~~i 886 (965)
++. ..+.+++.+.++++.+++ ...+.+.+ +.|... ....+ ...+++++.+.+
T Consensus 165 ~v~-~~n~~~l~~i~~~~~~~g--~~~~~~~~~~~p~~~~~~~~~-~~l~~~~~~~~~ 218 (370)
T PRK13758 165 VVT-SNTARHVNKIYKYFKEKD--FKFLQFINCLDPLYEEKGKYN-YSLKPKDYTKFL 218 (370)
T ss_pred Eec-cccccCHHHHHHHHHHcC--CCeEeeeeccCccccccCCCc-CccCHHHHHHHH
Confidence 664 456777888888999998 67665543 344321 11111 234666555443
No 497
>PLN02590 probable tyrosine decarboxylase
Probab=99.06 E-value=1.4e-07 Score=108.90 Aligned_cols=321 Identities=13% Similarity=0.056 Sum_probs=177.5
Q ss_pred CcHHHHHHHHHHHhhcCCCC-------CeEEEcCChhHHHHHHHHHHHHHHHh-cCCCCceE-EEEEcCCccCCcccccc
Q psy8199 295 THKPVIKLSEKLSSLTQYKL-------GHCFYGSDGASAVEVALKMSFHYWYN-KGFLNKKK-FICLQNSYHGETLGALA 365 (965)
Q Consensus 295 ~~~~~~~la~~l~~~~~~~~-------~~v~~~~sGseA~~~Al~~a~~~~~~-~g~~~~~~-vi~~~~~yHg~~~~~~~ 365 (965)
.++....+.+.++++++.+. ..-+|++||||||..|+.+||..... .|..+..+ ++.....-|-+..-+..
T Consensus 168 ~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 168 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred hHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH
Confidence 34555667777888875332 23678999999999999999985432 23222222 33333334544332323
Q ss_pred ccCCcCccchhcccCCCeeEecCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhC---CCcEEEEEEccccccCCCcccCC
Q psy8199 366 VTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYD 441 (965)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~aaii~ep~v~~~~G~~~~~ 441 (965)
+.|- ....++.+|.+.. .+. -|+++|+++|++. +....+|+..- -..++|.+-|
T Consensus 248 ilGl---------g~~~vr~Vp~d~~~~~~-----------md~~~L~~~I~~d~~~g~~P~~VvaTa-GTT~tGaiDp- 305 (539)
T PLN02590 248 IGGI---------HEENIRLLKTDSSTNYG-----------MPPESLEEAISHDLAKGFIPFFICATV-GTTSSAAVDP- 305 (539)
T ss_pred HcCC---------CcccEEEEeCCCCCCCc-----------CCHHHHHHHHHHHHhcCCCcEEEEEEe-CCCCCcccCC-
Confidence 2221 1123556665421 122 3788999888642 22344555544 4556787777
Q ss_pred hHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCC-Ccceeeec--cccCCCcccceeeeecHH--HHHhhhcc
Q psy8199 442 SIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMTTDK--IYNSIYYK 516 (965)
Q Consensus 442 ~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~-~pDivt~s--K~l~gG~~pig~v~~~~~--i~~~~~~~ 516 (965)
+++|.++|++||++|++|-++.|+...-.....-..|+ ..|-+++. |.+.-. ++.|+++.+.. +.+.+...
T Consensus 306 ---l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p-~~cg~llvr~~~~l~~a~~~~ 381 (539)
T PLN02590 306 ---LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFAN-QTCSPLWVKDRYSLIDALKTN 381 (539)
T ss_pred ---HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcC-cCEEEEEecCHHHHHHHhhcC
Confidence 99999999999999999999987642211111112354 47888764 666555 57888888753 33333210
Q ss_pred C-----C---c---ccccccCCCCCCHHHHHHHHHHHHHHhcccHHHHH---HHHHHHHHHHHHcccCCCceeeee-cee
Q psy8199 517 N-----N---I---NIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI---SQDMKKITKALTSLITHPKIINFR-QKG 581 (965)
Q Consensus 517 ~-----~---~---~~~~~~~t~~~~~~~~aaa~a~L~~~~~~~~~~~~---~~~~~~l~~~L~~l~~~~~i~~v~-g~G 581 (965)
. . . ..+...+.-.+-+......-.+|+.+-.+.+.+.+ -++.+++.+.|++. |.+.-+. ..=
T Consensus 382 ~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~---~~fel~~~~~l 458 (539)
T PLN02590 382 PEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD---PSFEVVTTRYF 458 (539)
T ss_pred HHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCce
Confidence 0 0 0 00111111112334445555666666555554444 45666666666543 4454322 222
Q ss_pred EEEEEEEeecCcc--chhhHHHHHHHHHHHcCcEEe-ec---C-CEEEEeC-CcccCHHHHHHHHHhhhcc
Q psy8199 582 MIWAFDVIIEDPE--QIETFSKKFFVAALKNELLLR-PI---G-NTVYLMP-PYILNKNEIQHMTSAIFQT 644 (965)
Q Consensus 582 ~~~~i~~~~~~~~--~~~~~~~~~~~~l~~~Gi~~~-~~---~-~~lR~~p-~~~~t~~~i~~~~~~l~~~ 644 (965)
.++.|.+...... .......++.+++.+.|.+.. +. | -.+|++. ....++++++.+++.+.+.
T Consensus 459 ~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 459 SLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 3444444311101 112344577888888886543 21 2 4788864 3456788899888877543
No 498
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.05 E-value=1.1e-08 Score=114.16 Aligned_cols=237 Identities=16% Similarity=0.197 Sum_probs=147.6
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCeEEEcCChhHHHHHHHHHHHHHHHhcCCCCceEEEEEcCCccCCccccccccCCcC
Q psy8199 292 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 371 (965)
Q Consensus 292 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Al~~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~ 371 (965)
+++.++...+|+++++++.+ .+.++.++||+.|+.+|+.... .++++||+....|.+......
T Consensus 59 ~r~~~P~~~~lE~~la~leg--~~~av~~sSG~aAi~~al~all--------~~GD~Vl~~~~~yg~t~~~~~------- 121 (384)
T PRK06434 59 TRWGNPTVQAFEEKYAVLEN--AEHALSFSSGMGAITSAILSLI--------KKGKRILSISDLYGQTFYFFN------- 121 (384)
T ss_pred eCCCChhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHH-------
Confidence 45677888999999999984 5678999999999999998653 257888887776655421110
Q ss_pred ccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCcEEEEEEccccccCCCcccCChHHHHHHHHH
Q psy8199 372 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 451 (965)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l 451 (965)
.........+.+++.+ +.+.++ ++ ++++.+|++|. +.|+++.+.+ +++|.++
T Consensus 122 --~~~~~~Gi~v~fvd~~-----------------~~~~~~--l~--~~~tklv~~e~-~snpt~~v~D----i~~I~~l 173 (384)
T PRK06434 122 --KVLKTLGIHVDYIDTD-----------------RLNSLD--FD--PSNYDLIYAES-ITNPTLKVPD----IKNVSSF 173 (384)
T ss_pred --HHHHhcCcEEEEECCC-----------------Chhhee--ec--CCCeeEEEEEc-CCCCCceeec----HHHHHHH
Confidence 1111112233444332 111221 22 34678899998 8888887776 9999999
Q ss_pred HHhcCCeEEEeccccCCCcccccccccccCCCcceeeec--cccCC-Ccccceeeee-cHHHHHhhhccCCcccccccCC
Q psy8199 452 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITG-GYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHS 527 (965)
Q Consensus 452 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~s--K~l~g-G~~pig~v~~-~~~i~~~~~~~~~~~~~~~~~t 527 (965)
|++++ +++|.++. -+. ...-.+...|++++| |-++| |-.-.|+++. ++++.+.+.. ......
T Consensus 174 a~~~~--lvVD~t~~-s~~-----~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~------~~~~~G 239 (384)
T PRK06434 174 CHEND--VIVDATFA-SPY-----NQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE------RRKTLG 239 (384)
T ss_pred HHHcC--eEEECCCC-Ccc-----cCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH------HHHhcC
Confidence 99998 45698863 111 222334568999876 77876 2112355555 4556555442 111122
Q ss_pred CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcccC-----CCcee----eeeceeEEEEEEEe
Q psy8199 528 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----NFRQKGMIWAFDVI 589 (965)
Q Consensus 528 ~~~~~~~~aaa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~i~----~v~g~G~~~~i~~~ 589 (965)
...+|+.++.++.-|+.+. ...++-.++...+.+.|+...+ +|++. ..+|-|.|++|++.
T Consensus 240 ~~~~~~~A~l~~~gL~tL~--~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 240 SNPDPIQAYLALRGLKTLG--LRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred CCCCHHHHHHHHhCCCcHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 3457887777777666553 2466667777788777765422 33321 12467889999985
No 499
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.04 E-value=1.4e-08 Score=113.69 Aligned_cols=317 Identities=9% Similarity=0.041 Sum_probs=172.5
Q ss_pred CCHHHHHHHHHHHhhccccccCC--CC------cHHHHHHHHHHHhhcCC-CCCeEEEcCC-hhHHHHHHHHHHHHHHHh
Q psy8199 271 SNSYINKALKNQLNKLEHVMLSN--LT------HKPVIKLSEKLSSLTQY-KLGHCFYGSD-GASAVEVALKMSFHYWYN 340 (965)
Q Consensus 271 ~~p~v~~av~~~~~~~~~~~~~~--~~------~~~~~~la~~l~~~~~~-~~~~v~~~~s-GseA~~~Al~~a~~~~~~ 340 (965)
.++.|++|+.+.+......+... .. .+...+..+.++++++. ..++|+|++| ||+|++.++.....
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~---- 85 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG---- 85 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC----
Confidence 47899999998875432111100 11 24567788889999874 4567999877 99999999876521
Q ss_pred cCCCCceEEEEEcCCccCCccccccccCCcCccchhcccCCCeeEecCCCCCCCCCCCChhHHHHHH-HHHHHHHHHhCC
Q psy8199 341 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA-IFDLEILLKKNH 419 (965)
Q Consensus 341 ~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~le~~l~~~~ 419 (965)
++ ++..+|+. +.|.-. .. . ...-....+..++.+..... .+ .+..+..+.
T Consensus 86 ~~--~~~~~i~~-g~~~~~-~~--~---------~a~~~g~~~~~~~~~~~g~~-----------~~~~~~~~~~~~--- 136 (355)
T cd00611 86 DK--GTADYVVT-GAWSAK-AA--K---------EAKRYGGVVVIVAAKEEGKY-----------TKIPDVETWDLA--- 136 (355)
T ss_pred CC--CeEEEEEC-CHHHHH-HH--H---------HHHhcCCCcEEEecccccCC-----------CCCCCHhhcCCC---
Confidence 11 12222322 222111 00 0 00001112333333211000 01 111111222
Q ss_pred CcEEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCeEEEeccccCCCcccccccccccCCCcceeeeccccCCCccc
Q psy8199 420 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLP 499 (965)
Q Consensus 420 ~~~aaii~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pDivt~sK~l~gG~~p 499 (965)
+++..|.+.- ..+.+|...+ ++++.||+++++|-+|+ +|.. ..-.+.+++ ++..--|.+ | ...
T Consensus 137 ~~~~lV~~~h-~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~g~~--~idv~~~~~--~~ss~~K~l-G-P~G 199 (355)
T cd00611 137 PDAAYVHYCS-NETIHGVEFD---------EVPDTGGVPLVADMSSN-ILSR--PIDVSKFGV--IYAGAQKNL-G-PAG 199 (355)
T ss_pred CCCCEEEEeC-CcccccEEcc---------eecccCCCeEEEEcccc-ccCC--CCCHHHhCE--EEeeccccc-C-CCc
Confidence 3444555554 5567777532 45667999999999998 5421 233333332 221133755 3 345
Q ss_pred ceeeeecHHHHHhhhccCCc----cc-ccccCCC-CCCHHHHHHHHHHHHHHhcc-c---HHHHHHHHHHHHHHHHHccc
Q psy8199 500 LSLVMTTDKIYNSIYYKNNI----NI-FLHSHSY-SGNPLACCAALATLEIFNKD-N---ILQRISQDMKKITKALTSLI 569 (965)
Q Consensus 500 ig~v~~~~~i~~~~~~~~~~----~~-~~~~~t~-~~~~~~~aaa~a~L~~~~~~-~---~~~~~~~~~~~l~~~L~~l~ 569 (965)
+|.+++++++.+.+....+. .. .....++ +.|-.+..+..++|+++.+. + +.++.+++.+++++.|+++.
T Consensus 200 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~ 279 (355)
T cd00611 200 VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSN 279 (355)
T ss_pred eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCc
Confidence 88999999888654321000 00 0111112 33455777778889988755 3 45566677777777777662
Q ss_pred CC-Cceeeeecee-EEEEEEEeecCccchhhHHHHHHHHHHHcCcEEeec---CCEEEEeCCcccCHHHHHHHHHhhhc
Q psy8199 570 TH-PKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHMTSAIFQ 643 (965)
Q Consensus 570 ~~-~~i~~v~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~lR~~p~~~~t~~~i~~~~~~l~~ 643 (965)
.. ........+. .++.|.+. + ......+...+.+.|+...+. .+.+|+++....+.+|++.+++.+.+
T Consensus 280 gl~~~~~~~~~rs~~vvsf~~~--~----~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~ 352 (355)
T cd00611 280 GFYRGPVDKRARSRMNVPFRLG--K----EELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKE 352 (355)
T ss_pred cccccCCCHHHcCceEEEEEcC--C----hhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 21 0111111122 44666653 1 012234556788999985443 26899999999999999999998765
No 500
>COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]
Probab=99.04 E-value=3.4e-09 Score=108.36 Aligned_cols=202 Identities=16% Similarity=0.202 Sum_probs=140.9
Q ss_pred eEeeccCCCCCCCCCCCCCCcCCCC----cccccCCCHHHHHHHHHHHHHCCCCEEEEeeccCCCCcccHHHHHHHHHHH
Q psy8199 684 LLSIKTGGCTEDCGYCPQSTHYNTE----ITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEV 759 (965)
Q Consensus 684 ~i~~~s~~C~~~C~fC~~~~~~~~~----~~~~~~~~~eei~~~~~~~~~~g~~~i~l~~g~~~~~~~~~~~~~~~~~~i 759 (965)
.+.+ |+.||.+|.||..+...... ...++..+.++|.+++....+ ....+++| +| ...+++.+++++.+
T Consensus 31 VlFv-TG~C~~~CfYCPvs~~r~gkdviyaNErpV~~~eDii~ea~~~~a---~GasiTGG-dP--l~~ieR~~~~ir~L 103 (353)
T COG2108 31 VLFV-TGLCNRSCFYCPVSDERKGKDVIYANERPVKSVEDIIEEAKLMDA---LGASITGG-DP--LLEIERTVEYIRLL 103 (353)
T ss_pred EEEE-ecccCCCcccCcCCHHhcCCcceeecccccCcHHHHHHHHHHhcc---ccccccCC-Ch--HHHHHHHHHHHHHH
Confidence 3445 99999999999877531111 123455678888888876554 44557666 45 35589999999999
Q ss_pred Hh-----cCcEeEEecCCCCHHHHHHHHHhCCCeEeccCCCCHHHHhcccCCCCHHHHHHHHHHHHHcCCceeeeEEEec
Q psy8199 760 KK-----IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL 834 (965)
Q Consensus 760 ~~-----~~~~i~~~~~~~~~e~l~~Lk~aG~~~i~i~~es~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~Gl 834 (965)
|+ .++++.++.-..+++.++.|.+||+|-|-+... .-.....+.+++.++.|++.|+.++. -|-.+
T Consensus 104 K~efG~~fHiHLYT~g~~~~~e~l~~L~eAGLDEIRfHp~--------~~~~~~~e~~i~~l~~A~~~g~dvG~-EiPai 174 (353)
T COG2108 104 KDEFGEDFHIHLYTTGILATEEALKALAEAGLDEIRFHPP--------RPGSKSSEKYIENLKIAKKYGMDVGV-EIPAI 174 (353)
T ss_pred HHhhccceeEEEeeccccCCHHHHHHHHhCCCCeEEecCC--------CccccccHHHHHHHHHHHHhCcccee-ecCCC
Confidence 96 346677788889999999999999998877652 11134567899999999999998875 44456
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCceeeccccccCCC---------CCCCC----CCCCHHHHHHHHHHHHHHCCCCceecc
Q psy8199 835 SESRDQRAELIFQLANLNPYPESVPINNLVQIKGT---------PLYGS----SILDPLEFIRTIAVARITMPTSRIRMS 901 (965)
Q Consensus 835 ~et~ed~~~~l~~l~~l~~~~~~i~~~~~~P~~gT---------~l~~~----~~~~~~~~~~~ia~~R~~lp~~~i~i~ 901 (965)
+.-.+.+.+.++++.+.+ .+++.++.+--..+. ...+. ...|.+..++++..+-.- -...+|.+
T Consensus 175 pg~e~~i~e~~~~~~~~~--~~FlNiNELE~sE~N~~~l~~~gy~~~~~~~~av~GS~E~~Lk~l~~~~~~-~~l~vH~C 251 (353)
T COG2108 175 PGEEEAILEFAKALDENG--LDFLNINELEFSENNYENLLERGYKISDDGSSAVAGSLEAALKVLKWAEEN-WDLTVHYC 251 (353)
T ss_pred cchHHHHHHHHHHHHhcc--cceeeeeeeeeccchHHHHHhcCceeccCCcccccchHHHHHHHHHHHhcc-cCceEEEC
Confidence 666777889999999998 899999877433321 01111 223557777777776543 23336677
Q ss_pred ccc
Q psy8199 902 AGR 904 (965)
Q Consensus 902 ~~~ 904 (965)
++.
T Consensus 252 ss~ 254 (353)
T COG2108 252 SSK 254 (353)
T ss_pred chh
Confidence 654
Done!