Query psy8216
Match_columns 189
No_of_seqs 194 out of 1335
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 21:38:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2klr_A Alpha-crystallin B chai 100.0 2.1E-34 7.2E-39 228.7 11.4 157 5-171 8-169 (175)
2 3l1e_A Alpha-crystallin A chai 100.0 9.4E-28 3.2E-32 175.9 14.3 102 64-165 3-106 (106)
3 2wj5_A Heat shock protein beta 99.9 2.8E-26 9.6E-31 166.6 12.4 98 64-164 2-99 (101)
4 4eld_A MJ16.5-P1, small heat s 99.9 3.5E-26 1.2E-30 178.8 9.7 97 64-164 57-161 (161)
5 3q9p_A Heat shock protein beta 99.9 6.6E-25 2.3E-29 154.7 10.4 83 68-150 2-84 (85)
6 2y1y_A Alpha-crystallin B chai 99.9 8.9E-24 3E-28 150.3 12.7 85 69-153 2-86 (90)
7 1gme_A Heat shock protein 16.9 99.9 5.2E-24 1.8E-28 165.0 8.0 100 63-164 43-150 (151)
8 3gla_A Low molecular weight he 99.9 1.6E-22 5.4E-27 145.9 12.0 88 64-152 5-99 (100)
9 4fei_A Heat shock protein-rela 99.9 2.9E-22 9.9E-27 145.4 12.4 90 63-153 6-97 (102)
10 3aab_A Putative uncharacterize 99.9 2E-22 6.9E-27 150.8 10.3 88 64-153 25-118 (123)
11 2bol_A TSP36, small heat shock 99.9 6.3E-22 2.1E-26 169.6 10.7 106 63-173 98-207 (314)
12 2bol_A TSP36, small heat shock 99.8 1.4E-18 4.8E-23 148.9 9.0 86 64-150 221-313 (314)
13 1rl1_A Suppressor of G2 allele 98.8 2.4E-08 8.3E-13 72.8 7.7 80 64-152 10-89 (114)
14 2xcm_C SGT1-like protein, cyto 98.7 3.7E-08 1.3E-12 68.8 7.5 80 64-152 3-82 (92)
15 3eud_A Protein SHQ1; CS domain 97.8 0.00037 1.3E-08 50.9 10.7 78 63-153 17-98 (115)
16 2k8q_A Protein SHQ1; beta-sand 97.7 4.9E-05 1.7E-09 57.1 5.5 77 64-153 4-84 (134)
17 1x5m_A Calcyclin-binding prote 97.2 0.0036 1.2E-07 46.1 10.1 80 64-152 21-104 (127)
18 1wh0_A Ubiquitin carboxyl-term 97.1 0.0027 9.4E-08 47.5 8.9 88 63-152 19-112 (134)
19 3igf_A ALL4481 protein; two-do 97.1 0.0013 4.6E-08 57.1 7.7 63 74-150 306-369 (374)
20 1wfi_A Nuclear distribution ge 97.1 0.0063 2.2E-07 44.9 10.3 77 64-152 8-88 (131)
21 1wgv_A KIAA1068 protein; CS do 96.9 0.011 3.6E-07 43.3 10.1 80 64-152 20-102 (124)
22 1ejf_A Progesterone receptor P 96.9 0.0049 1.7E-07 45.3 8.3 78 65-152 5-82 (125)
23 2o30_A Nuclear movement protei 96.8 0.0084 2.9E-07 44.3 9.2 75 64-151 5-80 (131)
24 3qor_A Nuclear migration prote 96.7 0.0082 2.8E-07 43.9 8.1 77 64-152 17-97 (121)
25 2rh0_A NUDC domain-containing 96.6 0.014 4.8E-07 44.6 8.9 76 64-152 14-91 (157)
26 2kmw_A Uncharacterized protein 96.1 0.017 5.9E-07 43.8 7.0 77 64-152 5-82 (150)
27 2cg9_X CO-chaperone protein SB 96.1 0.0032 1.1E-07 47.0 2.8 75 73-152 23-98 (134)
28 3q9p_A Heat shock protein beta 73.2 4.9 0.00017 26.8 4.3 34 117-152 8-41 (85)
29 3gla_A Low molecular weight he 70.3 8.2 0.00028 26.1 5.1 35 117-153 15-49 (100)
30 2y1y_A Alpha-crystallin B chai 67.9 5.5 0.00019 26.7 3.7 33 117-151 7-39 (90)
31 4fei_A Heat shock protein-rela 65.6 8.7 0.0003 26.3 4.4 33 117-151 17-49 (102)
32 2wj5_A Heat shock protein beta 64.7 6.6 0.00023 27.0 3.6 33 117-151 12-44 (101)
33 3l1e_A Alpha-crystallin A chai 61.8 10 0.00036 26.2 4.3 33 117-151 13-45 (106)
34 3aab_A Putative uncharacterize 60.6 15 0.0005 26.0 5.0 33 118-152 36-69 (123)
35 1nkw_E 50S ribosomal protein L 56.8 22 0.00074 28.2 5.7 46 86-150 39-84 (212)
36 1q5l_A Chaperone protein DNAK; 56.6 17 0.00059 26.3 4.8 32 132-166 101-132 (135)
37 4eld_A MJ16.5-P1, small heat s 55.1 34 0.0012 25.3 6.4 33 118-152 68-100 (161)
38 1gme_A Heat shock protein 16.9 55.0 38 0.0013 24.8 6.6 35 118-153 55-89 (151)
39 1rl6_A Protein (ribosomal prot 52.3 30 0.001 26.5 5.7 46 86-150 11-56 (177)
40 3v2d_H 50S ribosomal protein L 50.2 22 0.00074 27.4 4.7 44 86-148 12-55 (180)
41 1vq8_E 50S ribosomal protein L 47.6 25 0.00087 27.0 4.7 47 86-150 9-55 (178)
42 2klr_A Alpha-crystallin B chai 46.8 17 0.0006 27.6 3.6 33 117-151 74-106 (175)
43 2cql_A OK/SW-CL.103, 60S ribos 46.3 17 0.0006 25.2 3.2 19 86-104 20-38 (100)
44 3j21_F 50S ribosomal protein L 46.1 22 0.00074 27.5 4.1 45 86-148 14-58 (184)
45 2ks0_A Uncharacterized protein 44.2 12 0.00041 24.5 2.0 26 79-104 13-38 (71)
46 3dqg_A Heat shock 70 kDa prote 41.8 39 0.0013 24.9 4.8 34 131-167 83-116 (151)
47 2gjh_A Designed protein; oblig 41.3 16 0.00053 22.4 2.0 22 84-105 30-51 (62)
48 3h0x_A 78 kDa glucose-regulate 38.9 41 0.0014 24.7 4.5 33 131-166 83-115 (152)
49 3dob_A Heat shock 70 kDa prote 36.5 36 0.0012 25.1 3.9 34 131-167 83-116 (152)
50 1qys_A TOP7; alpha-beta, novel 36.3 31 0.0011 23.2 3.1 22 84-105 74-95 (106)
51 4e81_A Chaperone protein DNAK; 33.4 41 0.0014 26.4 3.9 34 131-167 84-117 (219)
52 2op6_A Heat shock 70 kDa prote 33.0 43 0.0015 24.3 3.8 32 132-166 84-115 (152)
53 2zkr_e 60S ribosomal protein L 32.3 75 0.0026 24.5 5.2 48 85-150 12-62 (192)
54 3n8e_A Stress-70 protein, mito 32.3 46 0.0016 25.4 4.0 33 131-166 103-135 (182)
55 2kgs_A Uncharacterized protein 31.7 28 0.00094 25.1 2.5 25 81-105 2-26 (132)
56 3bbo_I Ribosomal protein L6; l 31.0 34 0.0012 27.3 3.1 46 86-150 54-100 (223)
57 3oeq_A Frataxin homolog, mitoc 27.0 48 0.0016 23.9 3.0 16 133-149 49-64 (123)
58 1ew4_A CYAY protein; friedreic 26.1 33 0.0011 24.0 2.0 18 131-149 28-45 (106)
59 2o30_A Nuclear movement protei 24.8 65 0.0022 22.9 3.4 31 117-148 15-45 (131)
60 1u00_A HSC66, chaperone protei 24.6 75 0.0026 24.8 4.1 32 133-167 83-114 (227)
61 3jx8_A Putative lipoprotein; s 23.5 77 0.0026 24.9 4.0 40 65-104 33-72 (250)
62 4a17_E RPL9, 60S ribosomal pro 22.8 64 0.0022 24.9 3.2 19 85-103 12-30 (188)
63 3u5e_H L8, RP24, YL11, 60S rib 22.7 64 0.0022 24.9 3.2 19 86-104 13-31 (191)
64 3iz5_F 60S ribosomal protein L 22.3 66 0.0023 24.9 3.2 18 86-103 13-30 (190)
65 2nwt_A UPF0165 protein AF_2212 21.1 92 0.0031 20.2 3.2 17 131-148 3-19 (69)
66 1wgv_A KIAA1068 protein; CS do 20.9 1E+02 0.0036 21.5 3.9 31 117-148 30-61 (124)
67 1n91_A ORF, hypothetical prote 20.4 1.4E+02 0.005 20.8 4.4 34 68-102 8-42 (108)
No 1
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=100.00 E-value=2.1e-34 Score=228.71 Aligned_cols=157 Identities=43% Similarity=0.731 Sum_probs=79.3
Q ss_pred cccCCCCCCCCCC-CccccccCCCCCcccccCCCCCCCcccCCCCCCCcCCccc---ccc-ccCccceeEEcCCcEEEEE
Q psy8216 5 PYLLNELEDLAHP-NIYDQHFGLGYHPHDLLQHFPTPRILSVPLRSGYVRPWRH---VLE-NESGVSNFGLDKEGLKVNL 79 (189)
Q Consensus 5 P~~~r~~~~~~~p-rl~d~~fg~~~~~~d~~~~~~~~~~~~~~~~~~~~~p~~~---~~~-~~~~~~~v~~~~~~~~v~~ 79 (189)
|.++|.|.++..| ||||++||.+++++|++..+.. ...+++++.. ... .....++|++++++|+|.+
T Consensus 8 ~~~~~~~~~~~~~~rl~d~~fg~~~~~~~l~~~~~~--------~~~~~~~~~~~~r~~~~~~~~~~dv~e~~d~~~v~~ 79 (175)
T 2klr_A 8 PWIRRPFFPFHSPSRLFDQFFGEHLLESDLFPTSTS--------LSPFYLRPPSFLRAPSWFDTGLSEMRLEKDRFSVNL 79 (175)
T ss_dssp ---------------------------------------------------------------------CCCCSEEEEEE
T ss_pred CcccCccccccCCcchhhhhcCCCCChhhhcccccc--------cCccccCchhhccccccccCCceEEEEcCCeEEEEE
Confidence 4455556666667 9999999999999888754321 2223333211 001 2345689999999999999
Q ss_pred EcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcCCcCCCCCe
Q psy8216 80 DVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKATKEGAGER 159 (189)
Q Consensus 80 dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~~~~~~~~r 159 (189)
|||||++|||+|+++++.|+|+|++++++++++|++++|+|+|.||.+||.++|+|+|++||||+|++||.+.. ...|
T Consensus 80 dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~~~--~~~r 157 (175)
T 2klr_A 80 DVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVS--GPER 157 (175)
T ss_dssp CCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEEEEECC---------
T ss_pred ECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEEEEECCCCC--CCCe
Confidence 99999999999999999999999998877788999999999999999999999999996699999999998654 2469
Q ss_pred EEeEeecCCccc
Q psy8216 160 SIPVVQTNQPAV 171 (189)
Q Consensus 160 ~I~I~~~~~p~~ 171 (189)
+|+|+.+++|++
T Consensus 158 ~I~I~~~~~~~~ 169 (175)
T 2klr_A 158 TIPITREEKPAV 169 (175)
T ss_dssp ------------
T ss_pred EEEEecCCcccc
Confidence 999999998885
No 2
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.95 E-value=9.4e-28 Score=175.91 Aligned_cols=102 Identities=47% Similarity=0.881 Sum_probs=94.0
Q ss_pred ccceeEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEE
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGIL 143 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL 143 (189)
+.++|++++++|+|.+|||||+++||+|+++++.|+|+|+++++.++.+|.+++|.|+|.||.+||.++|+|+|++||+|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL 82 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGML 82 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEE
Confidence 56899999999999999999999999999999999999999888888889999999999999999999999999779999
Q ss_pred EEEEeCcCCcC--CCCCeEEeEee
Q psy8216 144 SIQAPKKATKE--GAGERSIPVVQ 165 (189)
Q Consensus 144 ~I~~Pk~~~~~--~~~~r~I~I~~ 165 (189)
+|++||.++.. ..++|.|+|++
T Consensus 83 ~I~~PK~~~~~~~~~~~r~I~I~r 106 (106)
T 3l1e_A 83 TFSGPKIPSGVDAGHSERAIPVSR 106 (106)
T ss_dssp EEEEEBCCCCTTTTSSSCCCCCCC
T ss_pred EEEEEccCcccccCCCCeEeeecC
Confidence 99999998752 24789999974
No 3
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.94 E-value=2.8e-26 Score=166.62 Aligned_cols=98 Identities=49% Similarity=0.782 Sum_probs=87.1
Q ss_pred ccceeEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEE
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGIL 143 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL 143 (189)
..+||++++++|+|.+|||||+++||+|+++++.|+|+|+++...++.+|.+++|+|+|.||.+||.++|+|+|++||+|
T Consensus 2 ~~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEE
T ss_pred CcEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEE
Confidence 46899999999999999999999999999999999999999877777789999999999999999999999999779999
Q ss_pred EEEEeCcCCcCCCCCeEEeEe
Q psy8216 144 SIQAPKKATKEGAGERSIPVV 164 (189)
Q Consensus 144 ~I~~Pk~~~~~~~~~r~I~I~ 164 (189)
+|++||.+.. +++.++|.
T Consensus 82 ~I~lPK~~~~---~~~~~~i~ 99 (101)
T 2wj5_A 82 SIQATPASAQ---ASLPSPPA 99 (101)
T ss_dssp EEEECBCCCC---CSSCC---
T ss_pred EEEEECCCcC---CCCCCccc
Confidence 9999998765 35555553
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.93 E-value=3.5e-26 Score=178.79 Aligned_cols=97 Identities=21% Similarity=0.292 Sum_probs=84.1
Q ss_pred ccceeEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeee--CCCceEE------EEEEEEEECCCCcccCCcEE
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERS--DQHGFIS------REFTRRYRIPDSVDAQAIAS 135 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~--~~~~~~~------~~F~R~~~LP~~vd~~~i~A 135 (189)
+.+||++++++|+|.++|||+++|||+|+++++.|+|+|+++... ++.+|.. +.|+|+|.||.+||.++|+|
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A 136 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASA 136 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEE
Confidence 349999999999999999999999999999999999999986532 2233332 48999999999999999999
Q ss_pred EcCCCCEEEEEEeCcCCcCCCCCeEEeEe
Q psy8216 136 KLSSDGILSIQAPKKATKEGAGERSIPVV 164 (189)
Q Consensus 136 ~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~ 164 (189)
+| +||||+|++||.+.. +.|+|+|+
T Consensus 137 ~~-~nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 137 KF-ENGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp EE-ETTEEEEEEEBCGGG---SCCCCCCC
T ss_pred EE-ECCEEEEEEEcCCCC---CCcEeecC
Confidence 99 899999999998765 47888885
No 5
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.92 E-value=6.6e-25 Score=154.67 Aligned_cols=83 Identities=40% Similarity=0.729 Sum_probs=71.5
Q ss_pred eEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEE
Q psy8216 68 FGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGILSIQA 147 (189)
Q Consensus 68 v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~ 147 (189)
+.+++++|+|.+|||||+++||+|+++++.|+|+|+++...+++++..++|.|+|.||.+||+++|+|+|..||+|+|++
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~l 81 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEA 81 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEE
Confidence 46889999999999999999999999999999999998776667788899999999999999999999993399999999
Q ss_pred eCc
Q psy8216 148 PKK 150 (189)
Q Consensus 148 Pk~ 150 (189)
||.
T Consensus 82 PK~ 84 (85)
T 3q9p_A 82 PMP 84 (85)
T ss_dssp ECC
T ss_pred EcC
Confidence 996
No 6
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.91 E-value=8.9e-24 Score=150.26 Aligned_cols=85 Identities=55% Similarity=0.973 Sum_probs=74.8
Q ss_pred EEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEEe
Q psy8216 69 GLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGILSIQAP 148 (189)
Q Consensus 69 ~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~P 148 (189)
.+++++|+|.++||||+++||+|++.++.|+|+|+++...++.+|++++|.|+|.||.+||.++|+|+|+.||+|+|++|
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence 36789999999999999999999999999999999887777788999999999999999999999999967999999999
Q ss_pred CcCCc
Q psy8216 149 KKATK 153 (189)
Q Consensus 149 k~~~~ 153 (189)
|.+.+
T Consensus 82 K~~~~ 86 (90)
T 2y1y_A 82 RKQVS 86 (90)
T ss_dssp BC---
T ss_pred cCCCC
Confidence 98755
No 7
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.90 E-value=5.2e-24 Score=165.05 Aligned_cols=100 Identities=20% Similarity=0.422 Sum_probs=85.1
Q ss_pred CccceeEEcCCcEEEEEEcCCCCCCceEEEEE-CCEEEEEEEEeeeeC--CCceEE-----EEEEEEEECCCCcccCCcE
Q psy8216 63 SGVSNFGLDKEGLKVNLDVQQFKPEEIDVKVV-DDFIVVHAKHEERSD--QHGFIS-----REFTRRYRIPDSVDAQAIA 134 (189)
Q Consensus 63 ~~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~-~~~L~I~g~~e~~~~--~~~~~~-----~~F~R~~~LP~~vd~~~i~ 134 (189)
.|.+||++++++|+|.++|||++++||+|++. ++.|+|+|+++...+ +.+|.. +.|.|+|.||.+||.++|+
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~ 122 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK 122 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceE
Confidence 47899999999999999999999999999995 789999998765432 233443 4799999999999999999
Q ss_pred EEcCCCCEEEEEEeCcCCcCCCCCeEEeEe
Q psy8216 135 SKLSSDGILSIQAPKKATKEGAGERSIPVV 164 (189)
Q Consensus 135 A~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~ 164 (189)
|+| +||+|+|++||....+ ...++|+|+
T Consensus 123 A~~-~nGvL~I~lPK~~~~~-~~~~~I~I~ 150 (151)
T 1gme_A 123 AGL-ENGVLTVTVPKAEVKK-PEVKAIQIS 150 (151)
T ss_dssp EEE-ETTEEEEEEECCCCCT-TCCCCCCCC
T ss_pred EEE-ECCEEEEEEEccCcCC-CCCeEeeeC
Confidence 999 8999999999987653 345777775
No 8
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.89 E-value=1.6e-22 Score=145.95 Aligned_cols=88 Identities=23% Similarity=0.460 Sum_probs=77.4
Q ss_pred ccceeEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeC--CCceEE-----EEEEEEEECCCCcccCCcEEE
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSD--QHGFIS-----REFTRRYRIPDSVDAQAIASK 136 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~--~~~~~~-----~~F~R~~~LP~~vd~~~i~A~ 136 (189)
|.+||++++++|+|.++|||+++++|+|+++++.|+|+|++..... +..|.+ +.|+|+|.||.+||.++|+|+
T Consensus 5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~ 84 (100)
T 3gla_A 5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAA 84 (100)
T ss_dssp CCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEE
T ss_pred CcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEE
Confidence 7899999999999999999999999999999999999999865432 233443 489999999999999999999
Q ss_pred cCCCCEEEEEEeCcCC
Q psy8216 137 LSSDGILSIQAPKKAT 152 (189)
Q Consensus 137 ls~dGvL~I~~Pk~~~ 152 (189)
| +||+|+|++||.+.
T Consensus 85 ~-~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 85 G-RNGVLEIRIPKRPA 99 (100)
T ss_dssp E-ETTEEEEEEEBC--
T ss_pred E-eCCEEEEEEecCCC
Confidence 9 89999999999864
No 9
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.88 E-value=2.9e-22 Score=145.45 Aligned_cols=90 Identities=16% Similarity=0.216 Sum_probs=79.3
Q ss_pred CccceeEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCC--CceEEEEEEEEEECCCCcccCCcEEEcCCC
Q psy8216 63 SGVSNFGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQ--HGFISREFTRRYRIPDSVDAQAIASKLSSD 140 (189)
Q Consensus 63 ~~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~--~~~~~~~F~R~~~LP~~vd~~~i~A~ls~d 140 (189)
.|.+||++++++|+|.++|||+++++|+|+++++.|+|+|+++....- .+...+.|.|+|.||.+||.++|+|+| +|
T Consensus 6 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~-~~ 84 (102)
T 4fei_A 6 TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASL-AG 84 (102)
T ss_dssp CCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEE-ET
T ss_pred cCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEE-EC
Confidence 378999999999999999999999999999999999999998542111 123457899999999999999999999 89
Q ss_pred CEEEEEEeCcCCc
Q psy8216 141 GILSIQAPKKATK 153 (189)
Q Consensus 141 GvL~I~~Pk~~~~ 153 (189)
|+|+|++||.++.
T Consensus 85 GvL~I~lpK~~~~ 97 (102)
T 4fei_A 85 GVLTVRFEKLRPT 97 (102)
T ss_dssp TEEEEEEEBSSCC
T ss_pred CEEEEEEEccCcc
Confidence 9999999998765
No 10
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.88 E-value=2e-22 Score=150.82 Aligned_cols=88 Identities=22% Similarity=0.264 Sum_probs=80.0
Q ss_pred ccceeEEcCCcEEEEEEcCCCCCCceEEEEEC-CEEEEEEEEeeeeCCCceEEE----EEEEEEECCCCcccCCc-EEEc
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQFKPEEIDVKVVD-DFIVVHAKHEERSDQHGFISR----EFTRRYRIPDSVDAQAI-ASKL 137 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~-~~L~I~g~~e~~~~~~~~~~~----~F~R~~~LP~~vd~~~i-~A~l 137 (189)
|.++|++++++|.|.++|||++++||+|++.+ +.|+|+|+++... +.+|..+ +|.|+|.||.+||.++| +|+|
T Consensus 25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~-~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~ 103 (123)
T 3aab_A 25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE-PGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKY 103 (123)
T ss_dssp SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC-CSCEEEECSCSEEEEEEECSSEECTTCCCEEEE
T ss_pred CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC-CCeEEEEEEeEEEEEEEECCCCcCcchhCeeEE
Confidence 78999999999999999999999999999999 9999999987654 4556555 89999999999999999 9999
Q ss_pred CCCCEEEEEEeCcCCc
Q psy8216 138 SSDGILSIQAPKKATK 153 (189)
Q Consensus 138 s~dGvL~I~~Pk~~~~ 153 (189)
+||+|+|++||.+..
T Consensus 104 -~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 104 -ENGVLTIRIPIAGTS 118 (123)
T ss_dssp -ETTEEEEEEEGGGEE
T ss_pred -cCCEEEEEEEcCCCC
Confidence 899999999998644
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=6.3e-22 Score=169.62 Aligned_cols=106 Identities=25% Similarity=0.340 Sum_probs=92.8
Q ss_pred CccceeEEcCC----cEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcC
Q psy8216 63 SGVSNFGLDKE----GLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLS 138 (189)
Q Consensus 63 ~~~~~v~~~~~----~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls 138 (189)
.+.+||+++++ +|+|.+|||||++|||+|+++++.|+|+|+++.. .++++.+++|+|+|.||.+||+++|+|+|+
T Consensus 98 ~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~-~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~ 176 (314)
T 2bol_A 98 DFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVA-CGDAAMSESVGRSIPLPPSVDRNHIQATIT 176 (314)
T ss_dssp GGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSS-TTCCCBCCCEEEEEECCTTBCGGGCEEEEC
T ss_pred CCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEecc-CCCCEEEEEEEEEEECCCCccccccEEEEe
Confidence 47899999999 9999999999999999999999999999998743 345577789999999999999999999993
Q ss_pred CCCEEEEEEeCcCCcCCCCCeEEeEeecCCccccc
Q psy8216 139 SDGILSIQAPKKATKEGAGERSIPVVQTNQPAVKQ 173 (189)
Q Consensus 139 ~dGvL~I~~Pk~~~~~~~~~r~I~I~~~~~p~~~~ 173 (189)
.||||+|++||.+++ .+.|+|+.++..++++
T Consensus 177 ~nGVL~I~lPK~~~~----~~~I~it~~~ql~Iqp 207 (314)
T 2bol_A 177 TDDVLVIEAPVNEPN----YKAIKLSPEKGLAIQP 207 (314)
T ss_dssp SSSEEEEEEEBSSCC----TTTEEEETTTEEEECC
T ss_pred CCCEEEEEEeccCcc----cceeecccCCccCcCC
Confidence 399999999998755 4568888888777653
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.76 E-value=1.4e-18 Score=148.85 Aligned_cols=86 Identities=21% Similarity=0.375 Sum_probs=69.7
Q ss_pred ccceeEEcC---CcEEEEEEc-CCCCCCceEEEEECCEEEEEEEEeeeeCC---CceEEEEEEEEEECCCCcccCCcEEE
Q psy8216 64 GVSNFGLDK---EGLKVNLDV-QQFKPEEIDVKVVDDFIVVHAKHEERSDQ---HGFISREFTRRYRIPDSVDAQAIASK 136 (189)
Q Consensus 64 ~~~~v~~~~---~~~~v~~dl-pG~~~edI~V~v~~~~L~I~g~~e~~~~~---~~~~~~~F~R~~~LP~~vd~~~i~A~ 136 (189)
.+.+|.+++ +.|+|.++| |||+||||+|++++|.|+|+|+++.+.+. .++.+++|+|+|.||++||+++|+|+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~ 300 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAE 300 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEE
Confidence 345666554 578899999 99999999999999999999998765432 24556799999999999999999999
Q ss_pred cCCCCEEEEEEeCc
Q psy8216 137 LSSDGILSIQAPKK 150 (189)
Q Consensus 137 ls~dGvL~I~~Pk~ 150 (189)
| +||||+|++||.
T Consensus 301 ~-~dGvL~i~~Pk~ 313 (314)
T 2bol_A 301 I-VDGLMVVEAPLF 313 (314)
T ss_dssp E-ETTEEEEEEEEE
T ss_pred E-eCCEEEEEEecC
Confidence 9 899999999986
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.75 E-value=2.4e-08 Score=72.76 Aligned_cols=80 Identities=8% Similarity=0.140 Sum_probs=71.1
Q ss_pred ccceeEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEE
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGIL 143 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL 143 (189)
+..+++++.+.+.|.+.+||++++++.|.+..+.|.|+++.. ++ ..|...+.|+..|+++..++++ .+|.|
T Consensus 10 ~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~----~~----~~y~~~~~L~~~I~~e~s~~~~-~~~~l 80 (114)
T 1rl1_A 10 IKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLP----SG----EDYNLKLELLHPIIPEQSTFKV-LSTKI 80 (114)
T ss_dssp CCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECT----TS----SEEEEEECBSSCCCGGGEEEEE-CSSSE
T ss_pred CCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC----CC----cEEEEEeeCCCcCCccccEEEE-ECCEE
Confidence 568899999999999999999999999999999999998642 11 3578899999999999999999 78999
Q ss_pred EEEEeCcCC
Q psy8216 144 SIQAPKKAT 152 (189)
Q Consensus 144 ~I~~Pk~~~ 152 (189)
+|+++|...
T Consensus 81 ~i~L~K~~~ 89 (114)
T 1rl1_A 81 EIKLKKPEA 89 (114)
T ss_dssp EEEEECSSC
T ss_pred EEEEEcCCC
Confidence 999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.72 E-value=3.7e-08 Score=68.81 Aligned_cols=80 Identities=8% Similarity=0.071 Sum_probs=70.4
Q ss_pred ccceeEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEE
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGIL 143 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL 143 (189)
+..+++++.+.+.|.+.+||+.++++.|.+..+.|.|++... + + ..|...+.|+..||++..++++ .+|.|
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~---~-~----~~y~~~~~L~~~I~~~~s~~~~-~~~~l 73 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP---G-E----DAYYLQPRLFGKIIPDKCKYEV-LSTKI 73 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT---T-S----CCEEECCBBSSCBCGGGCEEEE-CSSCE
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC---C-C----cEEEEeeEcCCccCchhEEEEE-ECCEE
Confidence 567899999999999999999999999999999999998642 1 1 2478888999999999999999 79999
Q ss_pred EEEEeCcCC
Q psy8216 144 SIQAPKKAT 152 (189)
Q Consensus 144 ~I~~Pk~~~ 152 (189)
.|++.|.+.
T Consensus 74 ~i~L~K~~~ 82 (92)
T 2xcm_C 74 EICLAKADI 82 (92)
T ss_dssp EEEEEBSSS
T ss_pred EEEEEcCCC
Confidence 999999753
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.00037 Score=50.86 Aligned_cols=78 Identities=14% Similarity=0.316 Sum_probs=66.2
Q ss_pred CccceeEEcCCcEEEEEEcCCCC--CCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCc-ccCCcEEEc-C
Q psy8216 63 SGVSNFGLDKEGLKVNLDVQQFK--PEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSV-DAQAIASKL-S 138 (189)
Q Consensus 63 ~~~~~v~~~~~~~~v~~dlpG~~--~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~v-d~~~i~A~l-s 138 (189)
.|...+.++++.+.|.+-+|..+ ..++++.++++.+....+- |.=++.||..| |.+.-+|+| +
T Consensus 17 TP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~P-------------YyLRL~lP~~vved~~~~A~YD~ 83 (115)
T 3eud_A 17 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLSP-------------YYLRLRFPHELIDDERSTAQYDS 83 (115)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEETT-------------EEEEEECSSCEECSTTCEEEEET
T ss_pred CCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecCC-------------eEEEEecCcceecCCCcceEEeC
Confidence 46778999999999999999876 8899999999999886532 55679999996 778888998 3
Q ss_pred CCCEEEEEEeCcCCc
Q psy8216 139 SDGILSIQAPKKATK 153 (189)
Q Consensus 139 ~dGvL~I~~Pk~~~~ 153 (189)
++|.++|++||..+.
T Consensus 84 d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 84 KDECINVKVAKLNKN 98 (115)
T ss_dssp TTTEEEEEEEESSTT
T ss_pred CCcEEEEEEcCCcCC
Confidence 699999999998754
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.71 E-value=4.9e-05 Score=57.15 Aligned_cols=77 Identities=13% Similarity=0.307 Sum_probs=66.7
Q ss_pred ccceeEEcCCcEEEEEEcCCCC--CCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCc-ccCCcEEEcC-C
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQFK--PEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSV-DAQAIASKLS-S 139 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~~--~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~v-d~~~i~A~ls-~ 139 (189)
|...+..+++.+.|.+-+|..+ ..++++.|++..+...... |.=++.||..| |.+.-+|+|. +
T Consensus 4 P~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~P-------------YyLRL~LP~~V~e~~~~kA~YD~d 70 (134)
T 2k8q_A 4 PRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLSP-------------YYLRLRFPHELIDDERSTAQYDSK 70 (134)
T ss_dssp SEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSSS-------------SCEEECCSSCEECCSSCEEEEETT
T ss_pred ceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecCC-------------eEEEecCCCeeecCCCcceeEecc
Confidence 5677899999999999999999 9999999999999886432 45569999998 9999999994 5
Q ss_pred CCEEEEEEeCcCCc
Q psy8216 140 DGILSIQAPKKATK 153 (189)
Q Consensus 140 dGvL~I~~Pk~~~~ 153 (189)
.|.|+|++||..+.
T Consensus 71 ~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 71 DECINVKVAKLNKN 84 (134)
T ss_dssp TTEEEEEEEESSTT
T ss_pred CCEEEEEEeCCCCC
Confidence 99999999998655
No 17
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.20 E-value=0.0036 Score=46.08 Aligned_cols=80 Identities=10% Similarity=0.180 Sum_probs=66.8
Q ss_pred ccceeEEcCCcEEEEEEcCCC---CCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEE-CCCCcccCCcEEEcCC
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQF---KPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYR-IPDSVDAQAIASKLSS 139 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~---~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~-LP~~vd~~~i~A~ls~ 139 (189)
...+++++.+.+.|.+.++|+ .++++.|.+..+.|.|++... ++ ..|.-.+. |-..||++.-+.++ .
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~---~~-----~~y~~~~~~L~~~I~~e~S~~~v-~ 91 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL---NG-----KSYSMIVNNLLKPISVEGSSKKV-K 91 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSC---SS-----SCEEEEEECBSSCCCTTTCEEEE-E
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcC---CC-----CcEEEEhHHhcCccCcccCEEEE-e
Confidence 467889999999999999998 899999999999999987421 11 23566775 99999999888888 6
Q ss_pred CCEEEEEEeCcCC
Q psy8216 140 DGILSIQAPKKAT 152 (189)
Q Consensus 140 dGvL~I~~Pk~~~ 152 (189)
++.+.|++-|...
T Consensus 92 ~~kVei~L~K~~~ 104 (127)
T 1x5m_A 92 TDTVLILCRKKVE 104 (127)
T ss_dssp TTEEEEEEECSSS
T ss_pred CCEEEEEEEECCC
Confidence 8999999999864
No 18
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.13 E-value=0.0027 Score=47.48 Aligned_cols=88 Identities=8% Similarity=0.078 Sum_probs=68.7
Q ss_pred CccceeEEc-CCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeee-----CCCceEEEEEEEEEECCCCcccCCcEEE
Q psy8216 63 SGVSNFGLD-KEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERS-----DQHGFISREFTRRYRIPDSVDAQAIASK 136 (189)
Q Consensus 63 ~~~~~v~~~-~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~-----~~~~~~~~~F~R~~~LP~~vd~~~i~A~ 136 (189)
.+..+++++ .+.+.|.+.++++.++++.|.+..+.|.|+.+..... ...|- ...|.-.+.|-..|+++.-+.+
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~-~~~y~~~~~L~~~I~pe~S~~~ 97 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGP-HTTFRWQVKLRNLIEPEQCTFC 97 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCT-TSCEEEEEEBSSCEEEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCc-ceeEEEeccccccCCchhCEEE
Confidence 467889999 9999999999999999999999999999987532110 00000 0136667789999999998888
Q ss_pred cCCCCEEEEEEeCcCC
Q psy8216 137 LSSDGILSIQAPKKAT 152 (189)
Q Consensus 137 ls~dGvL~I~~Pk~~~ 152 (189)
+ .++.+.|++.|.+.
T Consensus 98 v-~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 98 F-TASRIDICLRKRQS 112 (134)
T ss_dssp E-CSSEEEEEEEESSS
T ss_pred E-eCCEEEEEEEECCC
Confidence 8 67999999999753
No 19
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.07 E-value=0.0013 Score=57.06 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=54.3
Q ss_pred cEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCC-cEEEcCCCCEEEEEEeCc
Q psy8216 74 GLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQA-IASKLSSDGILSIQAPKK 150 (189)
Q Consensus 74 ~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~-i~A~ls~dGvL~I~~Pk~ 150 (189)
.|.+.+.+||+++++|++.-.++.|+|++ +.|+|.+.||...-.-. ..|.| .||.|+|+.-..
T Consensus 306 ~~~~~l~lP~~~~~~~~l~~~gdeL~v~~-------------g~~rR~i~LP~~L~~~~v~~A~~-~~~~L~i~~~~~ 369 (374)
T 3igf_A 306 NRQVRLFLPGFDKKQVKLTQYGPEVTVEA-------------GDQRRNIFLPPALSGRPITGAKF-QNNYLIISFLEH 369 (374)
T ss_dssp TTEEEEECTTCCGGGCEEEEETTEEEEEE-------------TTEEEEEECCTTTTTCCEEEEEE-ETTEEEEEECCC
T ss_pred cEEEEEECCCCCHHHeEEEEECCeEEEEE-------------CCEeecccCCHHHcCCCccccEE-ECCEEEEEEehh
Confidence 89999999999999999999999999986 23899999999866554 45779 899999998543
No 20
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.06 E-value=0.0063 Score=44.94 Aligned_cols=77 Identities=12% Similarity=0.150 Sum_probs=62.5
Q ss_pred ccceeEEcCCcEEEEEEcC-C--CCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCC
Q psy8216 64 GVSNFGLDKEGLKVNLDVQ-Q--FKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSD 140 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlp-G--~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~d 140 (189)
+...+.++.+.+.|.+.|| | +++++|.|.+..+.|.|..+.. . + .-...|...|+++.-+-++ .+
T Consensus 8 ~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~-----~-~-----~~~~~L~~~I~~e~s~w~i-~~ 75 (131)
T 1wfi_A 8 PNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQ-----P-P-----VVDGELYNEVKVEESSWLI-ED 75 (131)
T ss_dssp CSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTS-----C-C-----SBCSCBSSCBCSTTCEEEE-ET
T ss_pred CcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCc-----e-E-----EEecccccccccccCEEEE-cC
Confidence 4677899999999999999 6 8999999999999999986411 1 1 1233588899999988888 67
Q ss_pred C-EEEEEEeCcCC
Q psy8216 141 G-ILSIQAPKKAT 152 (189)
Q Consensus 141 G-vL~I~~Pk~~~ 152 (189)
| .|.|++-|...
T Consensus 76 ~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 76 GKVVTVHLEKINK 88 (131)
T ss_dssp TTEEEEEEEBSSS
T ss_pred CCEEEEEEEECCC
Confidence 7 89999999864
No 21
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.89 E-value=0.011 Score=43.32 Aligned_cols=80 Identities=16% Similarity=0.210 Sum_probs=64.6
Q ss_pred ccceeEEcCCcEEEEEEcC-CC-CCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCC
Q psy8216 64 GVSNFGLDKEGLKVNLDVQ-QF-KPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDG 141 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlp-G~-~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dG 141 (189)
+...+.++.+.+.|.+.|| |. ++++|.|.+..+.|.|.++.. .+. .+.-...|...|+++.-+-++ .+|
T Consensus 20 ~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~-----~~~---~~~~~~~L~~~I~~e~S~w~i-~~~ 90 (124)
T 1wgv_A 20 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEE-----NGE---RVLMEGKLTHKINTESSLWSL-EPG 90 (124)
T ss_dssp SSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECS-----SSE---EEEEEEEBSSCBCTTTCEEEE-CTT
T ss_pred CcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEcc-----CCC---ceEEcccccCcCCCcCCEEEE-eCC
Confidence 5678899999999999998 87 899999999999999987531 111 123456799999999999999 677
Q ss_pred E-EEEEEeCcCC
Q psy8216 142 I-LSIQAPKKAT 152 (189)
Q Consensus 142 v-L~I~~Pk~~~ 152 (189)
. |.|++-|...
T Consensus 91 k~v~i~L~K~~~ 102 (124)
T 1wgv_A 91 KCVLVNLSKVGE 102 (124)
T ss_dssp SEEEEEECBSSS
T ss_pred CEEEEEEEECCC
Confidence 5 9999999853
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.89 E-value=0.0049 Score=45.26 Aligned_cols=78 Identities=8% Similarity=0.072 Sum_probs=65.3
Q ss_pred cceeEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEEE
Q psy8216 65 VSNFGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGILS 144 (189)
Q Consensus 65 ~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL~ 144 (189)
.++++++.+.+.|++.+++. +++.|.+..+.|.+++... ..| ..|.-.+.|-..|+++.-+.++ .++.+.
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~----~~~---~~y~~~l~L~~~I~~e~S~~~v-~~~kie 74 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGG----SDN---FKHLNEIDLFHCIDPNDSKHKR-TDRSIL 74 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEET----TTT---EEEEEEEEBSSCEEEEEEEEEE-CSSCEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeC----CCC---ceEEEEEEccceeccccCEEEE-CCCEEE
Confidence 68899999999999999995 7999999999999987631 111 2477788999999999999998 578899
Q ss_pred EEEeCcCC
Q psy8216 145 IQAPKKAT 152 (189)
Q Consensus 145 I~~Pk~~~ 152 (189)
|++.|..+
T Consensus 75 i~L~K~~~ 82 (125)
T 1ejf_A 75 CCLRKGES 82 (125)
T ss_dssp EEEEESST
T ss_pred EEEEECCC
Confidence 99999863
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.83 E-value=0.0084 Score=44.32 Aligned_cols=75 Identities=13% Similarity=0.230 Sum_probs=61.0
Q ss_pred ccceeEEcCCcEEEEEEcC-CCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCE
Q psy8216 64 GVSNFGLDKEGLKVNLDVQ-QFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGI 142 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlp-G~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGv 142 (189)
+...+.++.+.+.|.+.|| |+++++|.|.+..+.|.|.++ |. . .-...|...|+++.-+-++ .+|.
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~--------g~---~-~~~~~L~~~I~~e~S~w~i-~~~k 71 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ--------GE---I-VIDGELLHEVDVSSLWWVI-NGDV 71 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET--------TE---E-EEEEEBSSCEEEEEEEEEE-ETTE
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC--------CE---e-eEccccccccccccCEEEE-eCCE
Confidence 5677899999999999995 899999999999999999863 11 1 2345788999999988888 6888
Q ss_pred EEEEEeCcC
Q psy8216 143 LSIQAPKKA 151 (189)
Q Consensus 143 L~I~~Pk~~ 151 (189)
|.|++-|..
T Consensus 72 v~i~L~K~~ 80 (131)
T 2o30_A 72 VDVNVTKKR 80 (131)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEECC
Confidence 999999984
No 24
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=96.69 E-value=0.0082 Score=43.86 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=62.7
Q ss_pred ccceeEEcCCcEEEEEEcC-C--CCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCC
Q psy8216 64 GVSNFGLDKEGLKVNLDVQ-Q--FKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSD 140 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlp-G--~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~d 140 (189)
+...+.++.+.+.|.+.|| | .++++|.|.+..+.|.|..+-. . +.-...|...|+++.-+-++ .+
T Consensus 17 ~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~------~-----~~~~g~L~~~I~~deS~w~i-~~ 84 (121)
T 3qor_A 17 PNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ------P-----AIIDGELYNEVKVEESSWLI-AD 84 (121)
T ss_dssp SSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS------C-----CSEEEEBSSCBCGGGCEEEE-ET
T ss_pred CCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc------c-----eEEeccccccccccccEEEE-cC
Confidence 4677899999999999998 4 7899999999999999875421 1 12245788999999988899 67
Q ss_pred C-EEEEEEeCcCC
Q psy8216 141 G-ILSIQAPKKAT 152 (189)
Q Consensus 141 G-vL~I~~Pk~~~ 152 (189)
| .|.|++-|...
T Consensus 85 ~~~i~i~L~K~~~ 97 (121)
T 3qor_A 85 GAVVTVHLEKINK 97 (121)
T ss_dssp TTEEEEEEEBSSS
T ss_pred CCEEEEEEEECCC
Confidence 7 99999998754
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=96.55 E-value=0.014 Score=44.64 Aligned_cols=76 Identities=14% Similarity=0.103 Sum_probs=63.4
Q ss_pred ccceeEEcCCcEEEEEEcC-CCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCE
Q psy8216 64 GVSNFGLDKEGLKVNLDVQ-QFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGI 142 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlp-G~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGv 142 (189)
+...+.++.+.+.|.+.|| |+++++|.|.+..+.|.|..+. . . .-...|...|+++.-+-++ .+|.
T Consensus 14 ~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg--------~---~-~l~g~L~~~I~~eeS~w~i-~~~k 80 (157)
T 2rh0_A 14 PWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG--------R---E-ILKGKLFDSTIADEGTWTL-EDRK 80 (157)
T ss_dssp SSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT--------E---E-EEEEEBSSCBCGGGCEEEE-ECCC
T ss_pred CcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC--------E---E-EEeeccccccCccccEEEE-cCCc
Confidence 5678899999999999997 8999999999999999998641 1 1 2345799999999988899 6665
Q ss_pred -EEEEEeCcCC
Q psy8216 143 -LSIQAPKKAT 152 (189)
Q Consensus 143 -L~I~~Pk~~~ 152 (189)
|.|++-|...
T Consensus 81 ~v~I~L~K~~~ 91 (157)
T 2rh0_A 81 MVRIVLTKTKR 91 (157)
T ss_dssp EEEEEEEBSSC
T ss_pred EEEEEEEEcCC
Confidence 9999999864
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.07 E-value=0.017 Score=43.85 Aligned_cols=77 Identities=9% Similarity=0.130 Sum_probs=62.9
Q ss_pred ccceeEEcCCcEEEEEEcCCCCCCceEEEEE-CCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCE
Q psy8216 64 GVSNFGLDKEGLKVNLDVQQFKPEEIDVKVV-DDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGI 142 (189)
Q Consensus 64 ~~~~v~~~~~~~~v~~dlpG~~~edI~V~v~-~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGv 142 (189)
|.+.++++.+.+.|++.+++. ++++|.+. .+.|.+++. . ..| ..|.-.+.|=..|+++ -+.+. ....
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~----~~~---~~y~~~l~L~~~Idpe-S~~~v-~~~k 72 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-G----AQG---ERFEFSLELYGKIMTE-YRKNV-GLRN 72 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-T----TTT---EEEEEEEEBSSCEEEE-EEEEE-ESSS
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-c----CCC---ceEEEEeEhhhccccc-ceEEe-cCCE
Confidence 678899999999999999997 58999998 789999986 1 121 3467788899999999 77777 4677
Q ss_pred EEEEEeCcCC
Q psy8216 143 LSIQAPKKAT 152 (189)
Q Consensus 143 L~I~~Pk~~~ 152 (189)
+.|++.|.+.
T Consensus 73 Iei~L~K~e~ 82 (150)
T 2kmw_A 73 IIFSIQKEER 82 (150)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 8999999764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=96.07 E-value=0.0032 Score=46.96 Aligned_cols=75 Identities=8% Similarity=0.154 Sum_probs=55.8
Q ss_pred CcEEEEEEcCCCCCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCE-EEEEEeCcC
Q psy8216 73 EGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGI-LSIQAPKKA 151 (189)
Q Consensus 73 ~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGv-L~I~~Pk~~ 151 (189)
+.+.|.+.+|+. .++.|.+..+.|.+++...... ++.-...|.-.+.|...|+++.-+.++ .++. |.|++.|..
T Consensus 23 ~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~--g~~~~~~y~~~l~L~~~Idpe~S~~~v-~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 23 NYVLITVSIADC--DAPELTIKPSYIELKAQSKPHV--GDENVHHYQLHIDLYKEIIPEKTMHKV-ANGQHYFLKLYKKD 97 (134)
T ss_dssp SEEEEECCCSSE--ESCCCCBCSSEEEECCEEC---------CEEBCEEEECSSCCCSSSEEEEE-CCC--CEEEEEECS
T ss_pred CEEEEEEEecCC--CceEEEEECCEEEEEEeccccc--CCccCceEEEEEEChhhccccccEEEE-CCCEEEEEEEEECC
Confidence 448889999997 4899999999999987643100 000013577788999999999999999 6777 999999987
Q ss_pred C
Q psy8216 152 T 152 (189)
Q Consensus 152 ~ 152 (189)
+
T Consensus 98 ~ 98 (134)
T 2cg9_X 98 L 98 (134)
T ss_dssp S
T ss_pred C
Confidence 3
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=73.15 E-value=4.9 Score=26.77 Aligned_cols=34 Identities=15% Similarity=0.309 Sum_probs=28.6
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcCC
Q psy8216 117 EFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKAT 152 (189)
Q Consensus 117 ~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~~ 152 (189)
.|.=.+.|| +++++.|+-++ .+|+|+|+.-+...
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~~ 41 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKT-KDGVVEITGKHAAR 41 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEE-ETTEEEEEEEEC--
T ss_pred EEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEccc
Confidence 478888996 79999999999 89999999987653
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=70.31 E-value=8.2 Score=26.12 Aligned_cols=35 Identities=29% Similarity=0.547 Sum_probs=29.6
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcCCc
Q psy8216 117 EFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKATK 153 (189)
Q Consensus 117 ~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~~~ 153 (189)
.|.=.+.|| +++.++|+-++ .+|.|+|+.-+....
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~~~~ 49 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQM-DKGILSIRGERKSES 49 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEE-ETTEEEEEEEECCGG
T ss_pred EEEEEEECC-CCCHHHEEEEE-ECCEEEEEEEEcCcC
Confidence 467788997 79999999999 799999999887543
No 30
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=67.88 E-value=5.5 Score=26.72 Aligned_cols=33 Identities=6% Similarity=0.288 Sum_probs=28.7
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcC
Q psy8216 117 EFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKA 151 (189)
Q Consensus 117 ~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~ 151 (189)
.|.=.+.|| +++.++|+-.+ .+|.|+|++-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEec
Confidence 477788997 89999999999 7999999998754
No 31
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=65.62 E-value=8.7 Score=26.29 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=28.5
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcC
Q psy8216 117 EFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKA 151 (189)
Q Consensus 117 ~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~ 151 (189)
.|.=.+.|| +++.++|+-++ .+|.|+|+.-+..
T Consensus 17 ~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~~ 49 (102)
T 4fei_A 17 HLDLLLDVP-GVDAGTLALAE-DGGQLTVSGERPG 49 (102)
T ss_dssp EEEEEEECT-TCCGGGCEEEE-ETTEEEEEEEECC
T ss_pred EEEEEEECC-CCchHhEEEEE-ECCEEEEEEEEec
Confidence 477788997 89999999999 7999999988743
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=64.74 E-value=6.6 Score=27.00 Aligned_cols=33 Identities=12% Similarity=0.223 Sum_probs=28.8
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcC
Q psy8216 117 EFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKA 151 (189)
Q Consensus 117 ~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~ 151 (189)
.|.=.+.|| ++++++|+-++ .+|.|+|+.-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKV-VGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEec
Confidence 367788997 89999999999 7999999998864
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=61.75 E-value=10 Score=26.23 Aligned_cols=33 Identities=9% Similarity=0.272 Sum_probs=28.4
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcC
Q psy8216 117 EFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKA 151 (189)
Q Consensus 117 ~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~ 151 (189)
.|.=.+.|| +++++.|+-.+ .+|.|+|+.-+..
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~ 45 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKV-QEDFVEIHGKHNE 45 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEcc
Confidence 477888996 79999999999 7999999997653
No 34
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=60.58 E-value=15 Score=25.99 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=27.7
Q ss_pred EEEEEECCCCcccCCcEEEcCCC-CEEEEEEeCcCC
Q psy8216 118 FTRRYRIPDSVDAQAIASKLSSD-GILSIQAPKKAT 152 (189)
Q Consensus 118 F~R~~~LP~~vd~~~i~A~ls~d-GvL~I~~Pk~~~ 152 (189)
|.=.+.|| +++.++|+-++ .+ |.|+|++-+...
T Consensus 36 ~~v~~~lP-G~~~edi~V~v-~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 36 LVVVADLA-GFNKEKIKARV-SGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEECC-SCCGGGCEEEE-ETTTEEEEEEECCCC
T ss_pred EEEEEECC-CCCHHHEEEEE-eCCCEEEEEEEEecc
Confidence 56667887 79999999999 67 999999998753
No 35
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=56.79 E-value=22 Score=28.23 Aligned_cols=46 Identities=20% Similarity=0.362 Sum_probs=30.6
Q ss_pred CCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCc
Q psy8216 86 PEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKK 150 (189)
Q Consensus 86 ~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~ 150 (189)
|+.++|+++++.|+|+|..- +.++.| +.. |.... +||.|+|+.+..
T Consensus 39 P~gV~V~i~~~~VtVKGPkG-----------~L~~~~--~~~-----v~i~~-e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPKG-----------ELTVPY--NTE-----LTVRQ-DGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCEEEEECCCE-----------EEEEEC--CCC-----eEEEE-ECCEEEEEcCCC
Confidence 57889999999999999653 233333 333 33455 688888776543
No 36
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=56.58 E-value=17 Score=26.30 Aligned_cols=32 Identities=25% Similarity=0.483 Sum_probs=22.7
Q ss_pred CcEEEcCCCCEEEEEEeCcCCcCCCCCeEEeEeec
Q psy8216 132 AIASKLSSDGILSIQAPKKATKEGAGERSIPVVQT 166 (189)
Q Consensus 132 ~i~A~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~~~ 166 (189)
.|+-.++.||+|.|++--... .....|.|+..
T Consensus 101 eVtf~iD~nGiL~V~a~d~~t---g~~~~i~i~~~ 132 (135)
T 1q5l_A 101 EVTFDIDADGILHVSAKDKNS---GKEQKITIKAS 132 (135)
T ss_dssp EEEEEECTTSEEEEEEEETTT---CCEEEEEEECS
T ss_pred EEEEEECCCCEEEEEEEECCC---CCEEEEEEecC
Confidence 355667899999999964433 34677887754
No 37
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=55.14 E-value=34 Score=25.26 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=26.8
Q ss_pred EEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcCC
Q psy8216 118 FTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKAT 152 (189)
Q Consensus 118 F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~~ 152 (189)
|.-.+.|| +++.++|+-++ .+|+|+|+.-+...
T Consensus 68 ~~v~~dlP-G~~~edi~V~~-~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNA-VGDTLEIRAKRSPL 100 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEE-ETTEEEEEEECCCC
T ss_pred EEEEEECC-CCChHhEEEEE-ECCEEEEEEEEccc
Confidence 44456675 68999999999 79999999988764
No 38
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=54.99 E-value=38 Score=24.82 Aligned_cols=35 Identities=11% Similarity=0.322 Sum_probs=27.4
Q ss_pred EEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcCCc
Q psy8216 118 FTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKATK 153 (189)
Q Consensus 118 F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~~~ 153 (189)
|.=.+.|| +++.++|+-.+..++.|+|+.-+....
T Consensus 55 ~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~~ 89 (151)
T 1gme_A 55 HVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKEK 89 (151)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCCC
T ss_pred EEEEEECC-CCChHHEEEEEecCCEEEEEEEEcccc
Confidence 55567787 789999999994367999999887543
No 39
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=52.35 E-value=30 Score=26.54 Aligned_cols=46 Identities=17% Similarity=0.435 Sum_probs=32.5
Q ss_pred CCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCc
Q psy8216 86 PEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKK 150 (189)
Q Consensus 86 ~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~ 150 (189)
|+.++|+++++.|+|+|..- +.++.| +.. |.... +||.|+|+.+..
T Consensus 11 P~gV~V~i~~~~VtVkGpkG-----------~L~~~~--~~~-----v~i~~-~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPKG-----------ELTRTF--HPD-----MTITV-EGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETTEEEEEETTE-----------EEEEEC--CTT-----CEEEE-ETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCCe-----------EEEEEc--CCC-----EEEEE-eCCEEEEEcCCC
Confidence 57899999999999999652 234433 443 44456 789988886654
No 40
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=50.22 E-value=22 Score=27.38 Aligned_cols=44 Identities=16% Similarity=0.407 Sum_probs=30.4
Q ss_pred CCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEEe
Q psy8216 86 PEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGILSIQAP 148 (189)
Q Consensus 86 ~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~P 148 (189)
|+.++|+++++.|+|+|.+- +.+|. |+.. |.-.+ +++.|+|+..
T Consensus 12 P~gV~v~i~~~~v~VkGpkG-----------~L~~~--~~~~-----v~i~~-~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPKG-----------ELEVP--VSPE-----MRVVV-EEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSSC-----------EEEEE--CCTT-----SEEEE-ETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCCc-----------EEEEE--eCCC-----EEEEE-ECCEEEEEEC
Confidence 68999999999999999653 12333 3333 34456 6888888754
No 41
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=47.61 E-value=25 Score=27.00 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=32.1
Q ss_pred CCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCc
Q psy8216 86 PEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKK 150 (189)
Q Consensus 86 ~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~ 150 (189)
|+.++|+++++.++|+|..- +.++.|. +.. |.... ++|.|+|+.+..
T Consensus 9 P~gV~v~i~~~~vtVkGpkG-----------~L~~~~~-~~~-----v~i~~-~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDNG-----------SVTRRLW-YPD-----IDVSV-DGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETTEEEEEETTE-----------EEEEECC-CTT-----CEEEE-ETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCCe-----------EEEEEEE-CCe-----EEEEE-ECCEEEEEcCCC
Confidence 57899999999999999652 2333331 333 44556 788888886654
No 42
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=46.76 E-value=17 Score=27.63 Aligned_cols=33 Identities=6% Similarity=0.288 Sum_probs=27.8
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEeCcC
Q psy8216 117 EFTRRYRIPDSVDAQAIASKLSSDGILSIQAPKKA 151 (189)
Q Consensus 117 ~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~Pk~~ 151 (189)
.|.-.+.|| +++++.|+.++ .+|.|+|+.-+..
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEcc
Confidence 477788886 89999999999 7999999997654
No 43
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=46.30 E-value=17 Score=25.17 Aligned_cols=19 Identities=21% Similarity=0.553 Sum_probs=17.0
Q ss_pred CCceEEEEECCEEEEEEEE
Q psy8216 86 PEEIDVKVVDDFIVVHAKH 104 (189)
Q Consensus 86 ~edI~V~v~~~~L~I~g~~ 104 (189)
|+.++|+++++.|+|+|..
T Consensus 20 P~gV~V~i~~~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEETTEEEEEETT
T ss_pred CCCCEEEEeCCEEEEECCC
Confidence 5889999999999999965
No 44
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=46.05 E-value=22 Score=27.53 Aligned_cols=45 Identities=24% Similarity=0.289 Sum_probs=29.6
Q ss_pred CCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCEEEEEEe
Q psy8216 86 PEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGILSIQAP 148 (189)
Q Consensus 86 ~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~P 148 (189)
|+.++|+++++.++|+|.+- +.+|.|.- .+ |.-.+ .+|.|+|+..
T Consensus 14 P~gV~v~i~~~~V~VkGpkG-----------~L~~~~~~-~~-----v~i~~-~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGPKG-----------ELEREFFW-PG-----IQIFT-EDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESSSEEEEECSSC-----------EEEEECCC-TT-----CEEEE-ETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEcCCe-----------EEEEEecC-Cc-----EEEEE-eCCEEEEEEC
Confidence 48899999999999998653 13333321 22 34456 6788888754
No 45
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=44.18 E-value=12 Score=24.53 Aligned_cols=26 Identities=23% Similarity=0.509 Sum_probs=22.0
Q ss_pred EEcCCCCCCceEEEEECCEEEEEEEE
Q psy8216 79 LDVQQFKPEEIDVKVVDDFIVVHAKH 104 (189)
Q Consensus 79 ~dlpG~~~edI~V~v~~~~L~I~g~~ 104 (189)
-+|-.|+.+.|.+.+..+.|.|+|+.
T Consensus 13 ~~V~sFd~e~i~L~T~~G~L~IkG~~ 38 (71)
T 2ks0_A 13 SKVQSFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EEEEEECSSEEEEEETTEEEEEEEEC
T ss_pred cCEEEECCCEEEEEeCceEEEEEcCC
Confidence 34556899999999999999999973
No 46
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=41.83 E-value=39 Score=24.89 Aligned_cols=34 Identities=18% Similarity=0.407 Sum_probs=24.5
Q ss_pred CCcEEEcCCCCEEEEEEeCcCCcCCCCCeEEeEeecC
Q psy8216 131 QAIASKLSSDGILSIQAPKKATKEGAGERSIPVVQTN 167 (189)
Q Consensus 131 ~~i~A~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~~~~ 167 (189)
=.|+-.+..||+|+|++--... .....|.|...+
T Consensus 83 IeVtf~iD~nGiL~Vsa~d~~t---g~~~~i~I~~~~ 116 (151)
T 3dqg_A 83 VEVTFDIDANGIVNVSARDRGT---GKEQQIVIQSSG 116 (151)
T ss_dssp EEEEEEECTTSEEEEEEEETTT---CCEEEEEEECSS
T ss_pred EEEEEEeccCcEEEEEEEEccC---CCEeEEEEecCC
Confidence 3466667899999999975543 356778888653
No 47
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=41.32 E-value=16 Score=22.44 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=18.6
Q ss_pred CCCCceEEEEECCEEEEEEEEe
Q psy8216 84 FKPEEIDVKVVDDFIVVHAKHE 105 (189)
Q Consensus 84 ~~~edI~V~v~~~~L~I~g~~e 105 (189)
+.-.||.|..+++.++|+|+-+
T Consensus 30 lgyndinvtwdgdtvtvegqle 51 (62)
T 2gjh_A 30 LGYNDINVTWDGDTVTVEGQLE 51 (62)
T ss_dssp TTCCSCEEEECSSCEEEEEECC
T ss_pred hCcccceeEEcCCEEEEEeEEc
Confidence 3457899999999999999865
No 48
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=38.95 E-value=41 Score=24.74 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=23.9
Q ss_pred CCcEEEcCCCCEEEEEEeCcCCcCCCCCeEEeEeec
Q psy8216 131 QAIASKLSSDGILSIQAPKKATKEGAGERSIPVVQT 166 (189)
Q Consensus 131 ~~i~A~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~~~ 166 (189)
=.|+-.++.||+|+|++--... .....|.|...
T Consensus 83 I~Vtf~iD~nGiL~V~a~d~~t---g~~~~i~I~~~ 115 (152)
T 3h0x_A 83 IEVTFALDANGILKVSATDKGT---GKSESITITND 115 (152)
T ss_dssp EEEEEEECTTSEEEEEEEETTT---CCEEEEEEECC
T ss_pred EEEEEEEcCCCEEEEEEEEcCC---CcEeEEEEecC
Confidence 3456667899999999975543 34677888765
No 49
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=36.49 E-value=36 Score=25.11 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=23.6
Q ss_pred CCcEEEcCCCCEEEEEEeCcCCcCCCCCeEEeEeecC
Q psy8216 131 QAIASKLSSDGILSIQAPKKATKEGAGERSIPVVQTN 167 (189)
Q Consensus 131 ~~i~A~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~~~~ 167 (189)
=.|+-.+..||+|+|++--... .....|.|....
T Consensus 83 IeVtf~iD~nGiL~Vsa~d~~t---g~~~~i~I~~~~ 116 (152)
T 3dob_A 83 IEVTFNIDANGILNVSAEDKST---GKSNRITIQNEK 116 (152)
T ss_dssp EEEEEEECTTCCEEEEEEETTT---CCEEEEEECCC-
T ss_pred EEEEEEeCCCCeEEEEEEEcCC---CCEEEEEEEcCC
Confidence 3466667899999999975433 346778887643
No 50
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=36.26 E-value=31 Score=23.15 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=18.3
Q ss_pred CCCCceEEEEECCEEEEEEEEe
Q psy8216 84 FKPEEIDVKVVDDFIVVHAKHE 105 (189)
Q Consensus 84 ~~~edI~V~v~~~~L~I~g~~e 105 (189)
+.-.||.|..+++.++|+|+-+
T Consensus 74 lgyndinvtfdgdtvtvegqle 95 (106)
T 1qys_A 74 LGYNDINVTFDGDTVTVEGQLE 95 (106)
T ss_dssp TTCCEEEEEEETTEEEEEEEC-
T ss_pred hCCcceeEEEcCCeEEEEeEEc
Confidence 4457999999999999999865
No 51
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=33.36 E-value=41 Score=26.38 Aligned_cols=34 Identities=24% Similarity=0.445 Sum_probs=24.3
Q ss_pred CCcEEEcCCCCEEEEEEeCcCCcCCCCCeEEeEeecC
Q psy8216 131 QAIASKLSSDGILSIQAPKKATKEGAGERSIPVVQTN 167 (189)
Q Consensus 131 ~~i~A~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~~~~ 167 (189)
=.|+-.++.||+|+|++--... .....|.|...+
T Consensus 84 IeVtf~iD~nGiL~V~a~d~~t---g~~~~i~I~~~~ 117 (219)
T 4e81_A 84 IEVTFDIDADGILHVSAKDKNS---GKEQKITIKASS 117 (219)
T ss_dssp EEEEEEECTTCCEEEEEEETTT---CCEEEEEECTTC
T ss_pred EEEEEEeCCCCCEeeeeecccc---CccceEeeeccc
Confidence 3466667899999999986543 346778887654
No 52
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=32.98 E-value=43 Score=24.35 Aligned_cols=32 Identities=19% Similarity=0.440 Sum_probs=22.4
Q ss_pred CcEEEcCCCCEEEEEEeCcCCcCCCCCeEEeEeec
Q psy8216 132 AIASKLSSDGILSIQAPKKATKEGAGERSIPVVQT 166 (189)
Q Consensus 132 ~i~A~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~~~ 166 (189)
.|+-.++.||+|.|++--... .....|.|...
T Consensus 84 ~V~f~id~nGiL~V~a~d~~t---g~~~~i~i~~~ 115 (152)
T 2op6_A 84 EVTFEIDVNGILHVSAEDKGT---GNKNKLTITND 115 (152)
T ss_dssp EEEEEECTTSCEEEEEEETTT---CCEEEEEECSS
T ss_pred EEEEEECCCcEEEEEEEEecC---CcEEEEEeecc
Confidence 456667899999999964332 34667777765
No 53
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=32.32 E-value=75 Score=24.55 Aligned_cols=48 Identities=15% Similarity=0.216 Sum_probs=31.7
Q ss_pred CCCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEEEcCCCCE---EEEEEeCc
Q psy8216 85 KPEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIASKLSSDGI---LSIQAPKK 150 (189)
Q Consensus 85 ~~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~ls~dGv---L~I~~Pk~ 150 (189)
=|+.++|+++++.|+|+|..- +.++. |+.. .|.... ++|. |+|+.+..
T Consensus 12 IP~gV~V~i~~~~VtVkGpkG-----------~L~~~--~~~~----~v~i~~-~~~~~~~i~v~~~~~ 62 (192)
T 2zkr_e 12 IPENVDITLKGRTVIVKGPRG-----------TLRRD--FNHI----NVELSL-LGKKKKRLRVDKWWG 62 (192)
T ss_dssp CCTTCEEEEETTEEEEEETTE-----------EEEEE--CCSS----SCEEEE-ETTTTCEEEEECSCC
T ss_pred cCCCCEEEEeCCEEEEECCCe-----------EEEEE--eCCC----CEEEEE-ecCceeEEEEEcCCC
Confidence 378999999999999999653 23333 3331 344556 5777 78876554
No 54
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=32.29 E-value=46 Score=25.36 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=23.5
Q ss_pred CCcEEEcCCCCEEEEEEeCcCCcCCCCCeEEeEeec
Q psy8216 131 QAIASKLSSDGILSIQAPKKATKEGAGERSIPVVQT 166 (189)
Q Consensus 131 ~~i~A~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~~~ 166 (189)
=.|+-.++.||+|.|++--... .....|.|...
T Consensus 103 IeVtf~iD~nGiL~VsA~d~~t---g~~~~i~I~~~ 135 (182)
T 3n8e_A 103 IEVTFDIDANGIVHVSAKDKGT---GREQQIVIQSS 135 (182)
T ss_dssp EEEEEEECTTCCEEEEEEETTT---CCEEEEEESCC
T ss_pred EEEEEEEecCCEEEEEEEEcCC---CCEeeEEEecC
Confidence 3466667899999999975543 34667777765
No 55
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=31.69 E-value=28 Score=25.12 Aligned_cols=25 Identities=0% Similarity=0.056 Sum_probs=21.7
Q ss_pred cCCCCCCceEEEEECCEEEEEEEEe
Q psy8216 81 VQQFKPEEIDVKVVDDFIVVHAKHE 105 (189)
Q Consensus 81 lpG~~~edI~V~v~~~~L~I~g~~e 105 (189)
.|..++-.|.|.++++.++++|.-.
T Consensus 2 ~~~~~p~~i~V~v~~G~VTLsG~Vp 26 (132)
T 2kgs_A 2 ASALSLSLLSISRSGNTVTLIGDFP 26 (132)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEEES
T ss_pred CCcccceeEEEEEECCEEEEEEECC
Confidence 4678888999999999999999753
No 56
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=31.01 E-value=34 Score=27.27 Aligned_cols=46 Identities=17% Similarity=0.302 Sum_probs=31.5
Q ss_pred CCceEEEEECCEEEEEEEEeeeeCCCceEEEEEEEEEECCCCcccCCcEE-EcCCCCEEEEEEeCc
Q psy8216 86 PEEIDVKVVDDFIVVHAKHEERSDQHGFISREFTRRYRIPDSVDAQAIAS-KLSSDGILSIQAPKK 150 (189)
Q Consensus 86 ~edI~V~v~~~~L~I~g~~e~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A-~ls~dGvL~I~~Pk~ 150 (189)
|+.++|+++++.|+|+|..-+ .++. |+..+ .. .. +||.|+|+.+..
T Consensus 54 P~gV~V~i~~~~VtVKGPkG~-----------L~~~--~~~~v-----~i~~~-e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKGPLGE-----------LALT--YPREV-----ELTKE-ESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESSSEEEECCSSCC-----------EEEE--CCSSC-----EEEEC-SSSCEEEECSSC
T ss_pred CCCCEEEEeCCEEEEECCCeE-----------EEEE--cCCCE-----EEEEe-cCCEEEEEcCCC
Confidence 588899999999999986521 2333 34444 33 56 788888886654
No 57
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=27.01 E-value=48 Score=23.93 Aligned_cols=16 Identities=25% Similarity=0.601 Sum_probs=14.2
Q ss_pred cEEEcCCCCEEEEEEeC
Q psy8216 133 IASKLSSDGILSIQAPK 149 (189)
Q Consensus 133 i~A~ls~dGvL~I~~Pk 149 (189)
+-+.+ .+|||+|+++.
T Consensus 49 ~Dve~-~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVEL-SHGVMTLEIPA 64 (123)
T ss_dssp CEEEE-CSSEEEEECTT
T ss_pred eEEEc-cCCEEEEEECC
Confidence 78899 79999999974
No 58
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=26.15 E-value=33 Score=23.97 Aligned_cols=18 Identities=22% Similarity=0.480 Sum_probs=14.9
Q ss_pred CCcEEEcCCCCEEEEEEeC
Q psy8216 131 QAIASKLSSDGILSIQAPK 149 (189)
Q Consensus 131 ~~i~A~ls~dGvL~I~~Pk 149 (189)
..+.+.+ .+|||+|+++.
T Consensus 28 ~d~D~e~-~~gVLti~f~~ 45 (106)
T 1ew4_A 28 SDIDCEI-NGGVLTITFEN 45 (106)
T ss_dssp SCCEEEE-ETTEEEEECTT
T ss_pred CCEeeec-cCCEEEEEECC
Confidence 3488899 79999999973
No 59
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=24.76 E-value=65 Score=22.88 Aligned_cols=31 Identities=13% Similarity=0.334 Sum_probs=22.4
Q ss_pred EEEEEEECCCCcccCCcEEEcCCCCEEEEEEe
Q psy8216 117 EFTRRYRIPDSVDAQAIASKLSSDGILSIQAP 148 (189)
Q Consensus 117 ~F~R~~~LP~~vd~~~i~A~ls~dGvL~I~~P 148 (189)
...-+|.||.+++..++...+ ...-|.|.+.
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i-~~~~l~v~~~ 45 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRM-VGKKICVKNQ 45 (131)
T ss_dssp EEEEEEECC---CCSCEEEEE-ETTEEEEEET
T ss_pred EEEEEEECCCCCCccceEEEE-ECCEEEEEEC
Confidence 456678999999999999999 5777888773
No 60
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=24.64 E-value=75 Score=24.78 Aligned_cols=32 Identities=34% Similarity=0.470 Sum_probs=22.0
Q ss_pred cEEEcCCCCEEEEEEeCcCCcCCCCCeEEeEeecC
Q psy8216 133 IASKLSSDGILSIQAPKKATKEGAGERSIPVVQTN 167 (189)
Q Consensus 133 i~A~ls~dGvL~I~~Pk~~~~~~~~~r~I~I~~~~ 167 (189)
|+-.++.||+|.|++--... .....|.|....
T Consensus 83 Vtf~iD~nGiL~V~a~d~~t---g~~~~i~i~~~~ 114 (227)
T 1u00_A 83 VTFQVDADGLLSVTAMEKST---GVEASIQVKPSY 114 (227)
T ss_dssp EEEEECTTCCEEEEEEETTT---CCEEEEEECCCS
T ss_pred EEEEECCCCcEEEEeecccc---cccceEEEEecc
Confidence 55567899999999864332 346677777653
No 61
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=23.48 E-value=77 Score=24.87 Aligned_cols=40 Identities=5% Similarity=0.030 Sum_probs=28.1
Q ss_pred cceeEEcCCcEEEEEEcCCCCCCceEEEEECCEEEEEEEE
Q psy8216 65 VSNFGLDKEGLKVNLDVQQFKPEEIDVKVVDDFIVVHAKH 104 (189)
Q Consensus 65 ~~~v~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~ 104 (189)
.+.+...++.+.|.+..+.--.+.|++++.++.|.|.-+.
T Consensus 33 ~V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~~ 72 (250)
T 3jx8_A 33 DFEYEQSDKAPYLSVTIDENLFDYLVTEVEGGTLKIYPKS 72 (250)
T ss_dssp EEEEEECSSCCEEEEEEEGGGGGGEEEEEETTEEEEEECB
T ss_pred EEEEEECCCCceEEEEECccccceEEEEEECCEEEEEEcC
Confidence 3444555456677777665456889999999999998653
No 62
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=22.80 E-value=64 Score=24.89 Aligned_cols=19 Identities=11% Similarity=0.350 Sum_probs=17.1
Q ss_pred CCCceEEEEECCEEEEEEE
Q psy8216 85 KPEEIDVKVVDDFIVVHAK 103 (189)
Q Consensus 85 ~~edI~V~v~~~~L~I~g~ 103 (189)
=|+.++|+++++.++|+|.
T Consensus 12 IP~gV~v~i~~~~V~VkGP 30 (188)
T 4a17_E 12 IPDKVTITAKQRVVEVKGP 30 (188)
T ss_dssp CCTTCEEEEETTEEEEEET
T ss_pred CCCCcEEEEeCCEEEEEcC
Confidence 4789999999999999994
No 63
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=22.66 E-value=64 Score=24.93 Aligned_cols=19 Identities=21% Similarity=0.403 Sum_probs=16.7
Q ss_pred CCceEEEEECCEEEEEEEE
Q psy8216 86 PEEIDVKVVDDFIVVHAKH 104 (189)
Q Consensus 86 ~edI~V~v~~~~L~I~g~~ 104 (189)
|+.++|+++++.++|+|.+
T Consensus 13 P~gV~v~i~~~~V~VkGPk 31 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPR 31 (191)
T ss_dssp CTTCEEEEETTEEEEEETT
T ss_pred CCCcEEEEeCCEEEEEcCC
Confidence 6899999999999999953
No 64
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=22.34 E-value=66 Score=24.85 Aligned_cols=18 Identities=28% Similarity=0.538 Sum_probs=16.1
Q ss_pred CCceEEEEECCEEEEEEE
Q psy8216 86 PEEIDVKVVDDFIVVHAK 103 (189)
Q Consensus 86 ~edI~V~v~~~~L~I~g~ 103 (189)
|+.++|+++++.++|+|.
T Consensus 13 P~gV~v~i~~~~V~VkGP 30 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGP 30 (190)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCCEEEEeCCEEEEECC
Confidence 588999999999999994
No 65
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=21.15 E-value=92 Score=20.17 Aligned_cols=17 Identities=12% Similarity=0.262 Sum_probs=13.1
Q ss_pred CCcEEEcCCCCEEEEEEe
Q psy8216 131 QAIASKLSSDGILSIQAP 148 (189)
Q Consensus 131 ~~i~A~ls~dGvL~I~~P 148 (189)
..|.|.| +||||.---|
T Consensus 3 k~IeAiY-EnGVfkPLe~ 19 (69)
T 2nwt_A 3 KIIEAVY-ENGVFKPLQK 19 (69)
T ss_dssp CCEEEEE-ETTEEEESSC
T ss_pred ceEEEEE-ECCEEeECCc
Confidence 4689999 9999875444
No 66
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=20.91 E-value=1e+02 Score=21.46 Aligned_cols=31 Identities=16% Similarity=0.352 Sum_probs=25.6
Q ss_pred EEEEEEECCCCc-ccCCcEEEcCCCCEEEEEEe
Q psy8216 117 EFTRRYRIPDSV-DAQAIASKLSSDGILSIQAP 148 (189)
Q Consensus 117 ~F~R~~~LP~~v-d~~~i~A~ls~dGvL~I~~P 148 (189)
...=++.||.++ +..+|.+.+ ...-|.|.+.
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i-~~~~l~v~~~ 61 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVAL-SSSSIRVAML 61 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEE-CSSEEEEEEE
T ss_pred EEEEEEEcCCCCCchhheEEEE-EcCEEEEEEE
Confidence 456778999988 999999999 6777888873
No 67
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=20.37 E-value=1.4e+02 Score=20.79 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=26.6
Q ss_pred eEEcCCcEEEEEEc-CCCCCCceEEEEECCEEEEEE
Q psy8216 68 FGLDKEGLKVNLDV-QQFKPEEIDVKVVDDFIVVHA 102 (189)
Q Consensus 68 v~~~~~~~~v~~dl-pG~~~edI~V~v~~~~L~I~g 102 (189)
+...++.+.|.+.+ ||-+.+.| +.+.++.|.|.-
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV~v 42 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKVAI 42 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECSSCEEEEC
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccCCEEEEEE
Confidence 46677788888888 89999887 456788888864
Done!