BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy822
(190 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91X58|ZFN2B_MOUSE AN1-type zinc finger protein 2B OS=Mus musculus GN=Zfand2b PE=1
SV=1
Length = 257
Score = 193 bits (491), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 111/157 (70%)
Query: 1 MEFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLC 60
MEFP LG HCS +C++LDFLP+KCDAC +FC+DH++Y H C SA +KDIQVPVCPLC
Sbjct: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60
Query: 61 NQPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCYQCAM 120
N PVP RGE PD AVG HID +C SD AQ++RKIFTNKC C+ +E++ + C +C
Sbjct: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERSGCRQREMMKLTCDRCGR 120
Query: 121 NFCLKHRHPNDHKCEGQKNAARNKALLKMKLWHELSN 157
NFC+KHRHP DH+C G+ + L + L++
Sbjct: 121 NFCIKHRHPLDHECSGEGHQTSRAGLAAISRAQGLAS 157
>sp|Q8WV99|ZFN2B_HUMAN AN1-type zinc finger protein 2B OS=Homo sapiens GN=ZFAND2B PE=1
SV=1
Length = 257
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 111/157 (70%)
Query: 1 MEFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLC 60
MEFP LG HCS +C++LDFLP+KCDAC +FC+DH++Y H C SA +KDIQVPVCPLC
Sbjct: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60
Query: 61 NQPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCYQCAM 120
N PVP RGE PD AVG HID +C SD AQ++RKIFTNKC C+ +E++ + C +C+
Sbjct: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSR 120
Query: 121 NFCLKHRHPNDHKCEGQKNAARNKALLKMKLWHELSN 157
NFC+KHRHP DH C G+ + L + +++
Sbjct: 121 NFCIKHRHPLDHDCSGEGHPTSRAGLAAISRAQAVAS 157
>sp|Q4KLG9|ZFN2B_RAT AN1-type zinc finger protein 2B OS=Rattus norvegicus GN=Zfand2b
PE=2 SV=1
Length = 257
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 110/157 (70%)
Query: 1 MEFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLC 60
MEFP LG HCS +C++LDFLP+KCDAC +FC+DH++Y H C SA +KDIQVPVCPLC
Sbjct: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAHHHCGSAYQKDIQVPVCPLC 60
Query: 61 NQPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCYQCAM 120
N PVP RGE PD AVG HID +C SD AQ++RKIFTNKC C+ +E++ + C +C
Sbjct: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERSGCRQREMMKLTCDRCGR 120
Query: 121 NFCLKHRHPNDHKCEGQKNAARNKALLKMKLWHELSN 157
NFC+KHRHP DH C G+ + L + L++
Sbjct: 121 NFCIKHRHPLDHDCSGEGHPTSRAGLAAISRAQGLAS 157
>sp|Q9JII7|ZFN2A_MOUSE AN1-type zinc finger protein 2A OS=Mus musculus GN=Zfand2a PE=2
SV=1
Length = 171
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
Query: 1 MEFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLC 60
MEFP LGKHCS TCK+LDFLP+ CDAC + FC DH SYVGH+C A +KD+QVPVCPLC
Sbjct: 1 MEFPDLGKHCSEPTCKQLDFLPITCDACKQDFCKDHFSYVGHKCPFAFKKDVQVPVCPLC 60
Query: 61 NQPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCYQCAM 120
N P+P KRGE+PD VG H+D +C + R K+FT++CS + C+ KE++ + C QC
Sbjct: 61 NAPIPVKRGEIPDVVVGEHMDRDCTFHPGRNRNKVFTHRCSKEGCRKKEMLQLACAQCHG 120
Query: 121 NFCLKHRHPNDHKCE-GQKNAARNKALLKMKLWHELSNYQCKKHHLRLEIK 170
NFC++HRHP DH C+ G +A+R + + S LR +K
Sbjct: 121 NFCIQHRHPLDHNCQAGSSSASRGRTSTSRAAEQKPSGVSWLAQRLRRTVK 171
>sp|Q5R966|ZFN2A_PONAB AN1-type zinc finger protein 2A OS=Pongo abelii GN=ZFAND2A PE=3
SV=1
Length = 194
Score = 176 bits (447), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 101/135 (74%)
Query: 1 MEFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLC 60
MEFP LGKHCS +TCK+LDFLPVKCDAC + FC DH +Y H+C A +KD+ VPVCPLC
Sbjct: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFTYAAHKCPFAFQKDVHVPVCPLC 60
Query: 61 NQPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCYQCAM 120
N P+P K+G++PD VG HID +CDS +++ KIFT +CS + CK KE++ + C QC
Sbjct: 61 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMSCAQCHG 120
Query: 121 NFCLKHRHPNDHKCE 135
NFC++HRHP DH C
Sbjct: 121 NFCIQHRHPLDHSCR 135
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 10 CSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPL 59
CS E CKK + L + C C FC H + H C+ +R I+ P+
Sbjct: 100 CSKEGCKKKEMLQMSCAQCHGNFCIQHRHPLDHSCRHGSRPTIKAGCSPV 149
>sp|Q5U2P3|ZFN2A_RAT AN1-type zinc finger protein 2A OS=Rattus norvegicus GN=Zfand2a
PE=2 SV=1
Length = 171
Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 100/136 (73%)
Query: 1 MEFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLC 60
MEFP LGKHCS TCK+LDFLP+ CDAC + FC DH SY GH+C A +KD+QVPVCPLC
Sbjct: 1 MEFPDLGKHCSEPTCKQLDFLPITCDACKQDFCKDHFSYSGHKCPFAFKKDVQVPVCPLC 60
Query: 61 NQPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCYQCAM 120
N P+P +RG++PD VG H+D +C + R K+FT++CS + C+ KE++ + C QC
Sbjct: 61 NAPIPVRRGDIPDVVVGEHMDRDCTFHPGRNRNKVFTHRCSKEGCRKKEMLQLACAQCHG 120
Query: 121 NFCLKHRHPNDHKCEG 136
NFC++HRHP DH C+
Sbjct: 121 NFCIQHRHPLDHNCQA 136
>sp|Q8N6M9|ZFN2A_HUMAN AN1-type zinc finger protein 2A OS=Homo sapiens GN=ZFAND2A PE=2
SV=2
Length = 145
Score = 173 bits (438), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 100/135 (74%)
Query: 1 MEFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLC 60
MEFP LGKHCS +TCK+LDFLPVKCDAC + FC DH Y H+C A +KD+ VPVCPLC
Sbjct: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC 60
Query: 61 NQPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCYQCAM 120
N P+P K+G++PD VG HID +CDS +++ KIFT +CS + CK KE++ + C QC
Sbjct: 61 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120
Query: 121 NFCLKHRHPNDHKCE 135
NFC++HRHP DH C
Sbjct: 121 NFCIQHRHPLDHSCR 135
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 10 CSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQV 54
CS E CKK + L + C C FC H + H C+ +R I+
Sbjct: 100 CSKEGCKKKEMLQMVCAQCHGNFCIQHRHPLDHSCRHGSRPTIKA 144
>sp|Q9SCM4|SAP13_ARATH Zinc finger AN1 and C2H2 domain-containing stress-associated
protein 13 OS=Arabidopsis thaliana GN=SAP13 PE=2 SV=1
Length = 249
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 2 EFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLCN 61
EFP LGKHCS++ CK++DFLP CD CL+++C DH SY+ H C R D+ V +CPLC
Sbjct: 5 EFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVICPLCA 64
Query: 62 QPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELI----PVKCYQ 117
+ V E P+ H++ +CD + + + KC V C +EL+ +KC
Sbjct: 65 KGVRLNPDEDPNITWEKHVNTDCDPSNYE--KAVKKKKCPVPRC--RELLTFSNTIKCRD 120
Query: 118 CAMNFCLKHRHPNDHKCEGQKNAARNKALL 147
C+++ CLKHR DH C G K + + +
Sbjct: 121 CSIDHCLKHRFGPDHSCSGPKKPESSFSFM 150
>sp|Q8VZ42|SAP11_ARATH Zinc finger AN1 and C2H2 domain-containing stress-associated
protein 11 OS=Arabidopsis thaliana GN=SAP11 PE=2 SV=1
Length = 279
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
Query: 2 EFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLCN 61
EFP LGKHCS++ CK++DFLP CD CL++FC DH SY+ H C R+D+ V +CPLC
Sbjct: 5 EFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSCPKGDREDVTVVICPLCA 64
Query: 62 QPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIP--VKCYQCA 119
+ V E P+ H++ +CD ++ K KC V CK +KC C
Sbjct: 65 KGVRLNPNEDPNITWEKHVNTDCDPSNYEKATK--KKKCPVPRCKEYLTFSNTIKCRDCN 122
Query: 120 MNFCLKHRHPNDHKCEGQK 138
++ CLKHR DH C G +
Sbjct: 123 VDHCLKHRFGPDHTCPGPR 141
>sp|Q0D5B9|SAP16_ORYSJ Zinc finger AN1 and C2H2 domain-containing stress-associated
protein 16 OS=Oryza sativa subsp. japonica GN=SAP16 PE=2
SV=2
Length = 290
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 2 EFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLCN 61
EFP+LGKHCS+ C ++DFLP CD C +FC H SY HQC +A +KD+ V +CPLC
Sbjct: 5 EFPNLGKHCSVGDCNQIDFLPFTCDRCDHVFCLQHRSYTSHQCPNANQKDVTVLICPLCA 64
Query: 62 QPVPTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIP--VKCYQCA 119
+ V E P+ H++++CD Q+ K KC V C+ ++C C
Sbjct: 65 KGVRLNPNEDPNITWDTHVNSDCDPSNYQKVTK--KKKCPVPGCRETLTFSNTIRCKDCT 122
Query: 120 MNFCLKHRHPNDHKCEGQK 138
CLKHR DHKC G +
Sbjct: 123 KEHCLKHRFGPDHKCPGPR 141
>sp|Q55GW8|Y8260_DICDI AN1-type zinc finger and UBX domain-containing protein DDB_G0268260
OS=Dictyostelium discoideum GN=DDB_G0268260 PE=4 SV=2
Length = 391
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
Query: 2 EFPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQ-VPVCPLC 60
+ H+G HC++ C+ LDFLP CD C FC +H Y H+CK+ +++ + V CP+C
Sbjct: 24 QLDHIGVHCNVTDCRVLDFLPFNCDLCNLSFCMEHKGYENHKCKNIEQRENKIVHPCPVC 83
Query: 61 NQPVPTKR----GELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCY 116
N + + F + +H+D +C + ++ + KCS+K CK E + VKC
Sbjct: 84 NCLIKVDSLANLDQTVRFIISVHMDTDCKFNQSKAPKSF---KCSLKTCKTSEFVEVKCD 140
Query: 117 QCAMNFCLKHRHPNDHKCEGQ 137
+C N+CLKHR P +H C G+
Sbjct: 141 KCKSNYCLKHRFPTNHSCTGK 161
>sp|Q67YE6|SAP12_ARATH Zinc finger AN1 domain-containing stress-associated protein 12
OS=Arabidopsis thaliana GN=SAP12 PE=2 SV=2
Length = 186
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 3 FPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLCNQ 62
FP LG+HC CK LDFLP CD C +FC +H SY H C + V +C C+
Sbjct: 9 FPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTVSICETCSI 68
Query: 63 PVPTKRGELPDFAVGLHI-DNNCDSDTAQERRKIFTNKCSVKNCKGKELIP----VKCYQ 117
+ T + L + + D D ++++ C VK C KE++ + C
Sbjct: 69 AIETTGFDEKGIKSLLEKHERSGDCDPNKKKKPT----CPVKRC--KEILTFANNLTCKY 122
Query: 118 CAMNFCLKHRHPNDHKCEGQ-KNAARNKALLKMKLWHELS 156
C + FCLKHR P DH C + N A + + LS
Sbjct: 123 CGVKFCLKHRFPTDHVCNKKIINTAGTSSRWNERFMEALS 162
>sp|Q8TCF1|ZFAN1_HUMAN AN1-type zinc finger protein 1 OS=Homo sapiens GN=ZFAND1 PE=1 SV=1
Length = 268
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 36/130 (27%)
Query: 6 LGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLCNQPVP 65
+G+HC +E C++ DFLP CD C +FC +H S H C P + N+ +
Sbjct: 6 IGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGC----------PEVTVINERLK 55
Query: 66 TKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCYQCAMNFCLK 125
T D T+ CS K+C +EL+ V C C NFCL+
Sbjct: 56 T------------------DQHTSY--------PCSFKDCAERELVAVICPYCEKNFCLR 89
Query: 126 HRHPNDHKCE 135
HRH +DH+CE
Sbjct: 90 HRHQSDHECE 99
>sp|Q6H595|SAP17_ORYSJ Zinc finger AN1 domain-containing stress-associated protein 17
OS=Oryza sativa subsp. japonica GN=SAP17 PE=2 SV=1
Length = 188
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 3 FPHLGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLCNQ 62
FP LG C E C +LDFLP CD C + FC++H +Y H C AA + V VC C
Sbjct: 9 FPDLGAQCDREDCNQLDFLPFDCDGCGKTFCAEHRTYRDHGCARAADQGRTVVVCEACGD 68
Query: 63 PVPTKRGELPDFAVGLHIDNNCDS---DTAQERRKIFTNKCSVKNCKGKELIP--VKCYQ 117
+ +R ++ + S D A++R+ +C V CK C
Sbjct: 69 AI-ERRAGDGGGDDAAVLEAHARSRRCDPARKRKP----RCPVPRCKETLTFSNTSGCKG 123
Query: 118 CAMNFCLKHRHPNDH 132
C CLKHR P DH
Sbjct: 124 CGQKVCLKHRFPADH 138
>sp|Q8BFR6|ZFAN1_MOUSE AN1-type zinc finger protein 1 OS=Mus musculus GN=Zfand1 PE=1 SV=1
Length = 268
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 56/133 (42%), Gaps = 42/133 (31%)
Query: 6 LGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPVCPLCNQPVP 65
+G+HC ++ C++ DFLP CD C +FC +H S H C
Sbjct: 6 IGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCS-------------------- 45
Query: 66 TKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNK---CSVKNCKGKELIPVKCYQCAMNF 122
+ + +ER K +K CS K C EL+ V C C NF
Sbjct: 46 -------------------EVNVVKERPKTDEHKSYSCSFKGCTDVELVAVICPYCEKNF 86
Query: 123 CLKHRHPNDHKCE 135
CL+HRH +DH CE
Sbjct: 87 CLRHRHQSDHDCE 99
>sp|Q55BU1|ZFAND_DICDI AN1-type zinc finger protein OS=Dictyostelium discoideum GN=zfand
PE=2 SV=1
Length = 165
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 6 LGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPV-CPLCNQPV 64
+G HC+I+ C LDFLP C C FC +H H+C + K V C C +
Sbjct: 10 VGVHCAIKDCNLLDFLPFICQGCQGQFCLEHKEEKEHKCPTPIVKIGGTTVTCDKCESIL 69
Query: 65 PTKRGELPDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKELIPVKCYQCAMNFCL 124
P + +H+ C T + +KCS C E I + C C NFC+
Sbjct: 70 PVPVNCFEKDILSMHLRKGCPKKTT-----VNQHKCSF--CPKMESIKIVCPNCKNNFCI 122
Query: 125 KHRHPNDHKCEGQKNAARNKAL 146
KHR DHKC+ + N + +
Sbjct: 123 KHRFERDHKCKPRVNPPLQQTI 144
>sp|P53899|YNP5_YEAST AN1-type zinc finger protein YNL155W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNL155W PE=1 SV=1
Length = 274
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 6 LGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCK 45
+GKHC+ C++LDFLP C C E FCS+H H C+
Sbjct: 14 VGKHCAY--CRQLDFLPFHCSFCNEDFCSNHRLKEDHHCR 51
>sp|Q12216|SIZ2_YEAST E3 SUMO-protein ligase SIZ2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NFI1 PE=1 SV=1
Length = 726
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 6 LGKHCSIETCKKLDFLPVKCDACLEMFCSDHMSYVGHQCKSAARKDIQVPV--CPLCNQP 63
L C I +C ++ + P K D C + C D + ++ Q QVP CP+C P
Sbjct: 334 LSLQCPI-SCTRMKY-PAKTDQCKHIQCFDALWFLHSQS--------QVPTWQCPICQHP 383
Query: 64 VPTKRGELPDFAVGLHIDNNCDSDTAQ 90
+ + ++ +F +I NC+ D Q
Sbjct: 384 IKFDQLKISEFVD--NIIQNCNEDVEQ 408
>sp|Q923L3|CSMD1_MOUSE CUB and sushi domain-containing protein 1 OS=Mus musculus GN=Csmd1
PE=2 SV=2
Length = 3564
Score = 31.2 bits (69), Expect = 3.9, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 55 PVCP--LCNQPVPTKRGEL--PDFAVGLHIDNNCDSDTAQERRKIFTNKCSVKNCKGKEL 110
P+C LCNQP P G++ DF G I +C D Q + ++ +C+G+ +
Sbjct: 3090 PLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSC-VDGYQ------LSHSAILSCEGRGV 3142
Query: 111 IPVKCYQCAMNFCLKHRHPNDHKCEGQKNAARNKALLKMK 150
+ QC FC P + + G+ +++ ++ K
Sbjct: 3143 WKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCK 3182
>sp|Q60560|SMBP2_MESAU DNA-binding protein SMUBP-2 OS=Mesocricetus auratus GN=IGHMBP2 PE=1
SV=1
Length = 989
Score = 30.8 bits (68), Expect = 5.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 98 NKCSVKNCKGKELIPVK-CYQCAMNFCLKHRHPNDHKCEGQKNAARNKALL 147
N CS C + C C+ +CL H P H C G+K A + ++
Sbjct: 889 NTCSFAKCTASTTTLGQFCMHCSRRYCLSHHLPEIHGC-GEKARAHARQMI 938
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,250,111
Number of Sequences: 539616
Number of extensions: 2901533
Number of successful extensions: 7508
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 7436
Number of HSP's gapped (non-prelim): 66
length of query: 190
length of database: 191,569,459
effective HSP length: 111
effective length of query: 79
effective length of database: 131,672,083
effective search space: 10402094557
effective search space used: 10402094557
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)