Query psy8222
Match_columns 198
No_of_seqs 198 out of 1227
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 21:48:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8222.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8222hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mpx_A FYVE, rhogef and PH dom 99.9 6.6E-27 2.2E-31 210.3 4.9 118 2-120 301-432 (434)
2 1z2q_A LM5-1; membrane protein 99.9 3.7E-23 1.3E-27 149.3 5.1 72 50-122 9-81 (84)
3 1x4u_A Zinc finger, FYVE domai 99.9 9.7E-23 3.3E-27 147.1 6.4 68 53-121 5-79 (84)
4 2yw8_A RUN and FYVE domain-con 99.8 4.4E-22 1.5E-26 143.1 4.4 67 53-121 10-76 (82)
5 3t7l_A Zinc finger FYVE domain 99.8 3.7E-22 1.3E-26 145.9 3.2 73 50-124 8-80 (90)
6 1joc_A EEA1, early endosomal a 99.8 5E-22 1.7E-26 153.3 2.3 65 53-119 60-124 (125)
7 1vfy_A Phosphatidylinositol-3- 99.8 6.5E-22 2.2E-26 139.2 1.8 67 51-121 3-70 (73)
8 1wfk_A Zinc finger, FYVE domai 99.8 5E-20 1.7E-24 134.1 5.3 62 60-122 7-68 (88)
9 1dvp_A HRS, hepatocyte growth 99.8 1.3E-19 4.5E-24 151.2 6.5 94 22-120 106-219 (220)
10 3zyq_A Hepatocyte growth facto 99.8 1.6E-19 5.6E-24 151.6 6.3 69 50-122 155-224 (226)
11 1y02_A CARP2, FYVE-ring finger 99.7 1.3E-18 4.6E-23 133.3 1.8 65 49-121 6-70 (120)
12 2vrw_B P95VAV, VAV1, proto-onc 99.5 2.4E-14 8.1E-19 127.8 7.0 92 2-96 297-391 (406)
13 3ky9_A Proto-oncogene VAV; cal 99.2 2.4E-11 8.3E-16 113.5 6.3 92 2-96 469-563 (587)
14 1zc3_B Exocyst complex protein 98.4 6.3E-07 2.2E-11 67.2 6.7 42 2-43 71-112 (113)
15 2da0_A 130-kDa phosphatidylino 97.9 1.6E-05 5.5E-10 58.2 5.8 40 4-43 67-106 (114)
16 2lul_A Tyrosine-protein kinase 97.8 1.7E-05 5.8E-10 62.4 5.2 37 3-39 86-122 (164)
17 1u5d_A SKAP55, SRC kinase-asso 97.8 2.8E-05 9.5E-10 55.2 5.6 37 4-40 70-107 (108)
18 1btk_A Bruton'S tyrosine kinas 97.8 4E-05 1.4E-09 60.7 6.3 49 5-57 99-147 (169)
19 2dn6_A KIAA0640 protein; PH do 97.7 7.9E-05 2.7E-09 53.7 7.1 39 4-42 69-107 (115)
20 2d9x_A Oxysterol binding prote 97.7 7.3E-05 2.5E-09 55.0 6.4 43 3-45 68-111 (120)
21 1fao_A Dual adaptor of phospho 97.6 5E-05 1.7E-09 56.0 4.6 38 3-40 77-114 (126)
22 2p0d_A RHO GTPase-activating p 97.6 0.0001 3.4E-09 55.6 6.3 38 4-41 89-127 (129)
23 2rsg_A Collagen type IV alpha- 97.6 4E-05 1.4E-09 53.8 3.4 34 3-36 59-92 (94)
24 2dhk_A TBC1 domain family memb 97.6 0.00014 4.8E-09 53.5 6.5 40 4-43 70-109 (119)
25 1eaz_A Tandem PH domain contai 97.6 0.00012 4.1E-09 53.5 5.8 37 4-40 77-113 (125)
26 1wjm_A Beta-spectrin III; PH d 97.6 0.00012 4E-09 54.0 5.8 37 3-39 81-118 (123)
27 3cxb_B Pleckstrin homology dom 97.5 5.7E-05 2E-09 55.5 3.5 38 4-41 66-104 (112)
28 1pls_A Pleckstrin homology dom 97.5 0.00017 5.7E-09 52.1 5.9 38 3-40 65-103 (113)
29 2cod_A Centaurin-delta 1; ARF 97.5 0.00014 4.8E-09 52.8 5.4 36 4-39 65-100 (115)
30 1v61_A RAC/CDC42 guanine nucle 97.5 0.00011 3.7E-09 56.6 4.8 38 2-39 89-127 (132)
31 1wg7_A Dedicator of cytokinesi 97.4 0.00025 8.4E-09 53.9 6.4 38 3-40 88-126 (150)
32 1x1f_A Signal-transducing adap 97.4 0.00017 5.8E-09 56.3 5.3 35 4-38 79-113 (149)
33 1v5u_A SBF1, SET binding facto 97.4 8.5E-05 2.9E-09 53.7 3.3 35 4-38 77-111 (117)
34 2cof_A Protein KIAA1914; PH do 97.4 0.00014 4.8E-09 52.4 4.4 36 3-38 65-101 (107)
35 1unq_A RAC-alpha serine/threon 97.4 0.00025 8.6E-09 52.1 5.8 40 4-43 72-115 (125)
36 3aj4_A Pleckstrin homology dom 97.4 0.00022 7.5E-09 51.4 5.3 35 4-38 76-111 (112)
37 1v89_A Hypothetical protein KI 97.4 0.00021 7.3E-09 51.4 5.1 35 4-38 70-112 (118)
38 2d9v_A Pleckstrin homology dom 97.4 0.00024 8.1E-09 53.2 5.2 35 4-38 79-114 (130)
39 2i5f_A Pleckstrin; PH domain, 97.4 0.00029 9.8E-09 50.2 5.4 35 3-37 73-108 (109)
40 1btn_A Beta-spectrin; signal t 97.3 0.00021 7.1E-09 50.7 4.5 33 4-36 73-106 (106)
41 3rcp_A Pleckstrin homology dom 97.3 0.00015 5E-09 51.5 3.7 36 4-39 58-94 (103)
42 1v5p_A Pleckstrin homology dom 97.3 0.00023 7.7E-09 53.8 4.4 35 4-38 86-120 (126)
43 1fgy_A GRP1; PH domain, signal 97.3 0.00047 1.6E-08 50.3 5.8 27 13-39 95-121 (127)
44 2dkp_A Pleckstrin homology dom 97.3 0.00036 1.2E-08 51.2 5.1 36 3-38 83-119 (128)
45 2j59_M RHO-GTPase activating p 97.2 0.00032 1.1E-08 54.5 4.7 36 3-38 76-111 (168)
46 1dro_A Beta-spectrin; cytoskel 97.2 0.00046 1.6E-08 50.9 5.1 36 4-39 84-120 (122)
47 1u5f_A SRC-associated adaptor 97.2 0.00028 9.6E-09 53.7 4.0 38 4-41 84-122 (148)
48 1x1g_A Pleckstrin 2; PH domain 97.2 0.00023 8E-09 52.4 3.4 36 3-38 88-124 (129)
49 1upq_A PEPP1; PH domain, phosp 97.2 0.00049 1.7E-08 50.1 5.1 37 3-39 73-110 (123)
50 1wi1_A Calcium-dependent activ 97.1 0.00063 2.2E-08 52.0 5.5 35 4-38 76-110 (126)
51 2d9y_A Pleckstrin homology dom 97.1 0.00046 1.6E-08 49.8 4.4 36 3-38 73-109 (117)
52 3qwm_A Iqsec1, IQ motif and SE 97.1 0.00095 3.3E-08 51.9 6.3 40 2-41 80-125 (140)
53 1wgq_A FYVE, rhogef and PH dom 97.1 0.00066 2.2E-08 48.7 5.1 35 4-38 68-103 (109)
54 2coc_A FYVE, rhogef and PH dom 97.1 0.00075 2.6E-08 50.1 5.5 35 4-38 72-106 (112)
55 1x05_A Pleckstrin; PH domain, 97.1 0.00048 1.7E-08 50.8 4.5 37 3-39 84-121 (129)
56 2w2x_D 1-phosphatidylinositol- 97.0 0.00066 2.2E-08 50.6 4.8 37 4-40 82-121 (124)
57 3tfm_A Myosin X; split PH doma 96.9 0.0013 4.5E-08 54.1 5.5 36 4-39 121-156 (228)
58 2rov_A RHO-associated protein 96.8 0.0013 4.3E-08 49.2 4.8 37 2-38 73-115 (117)
59 3a8p_A T-lymphoma invasion and 96.7 0.0028 9.6E-08 53.6 6.4 38 4-41 89-127 (263)
60 1qqg_A IRS-1, insulin receptor 96.7 0.0015 5.2E-08 55.3 4.5 38 3-40 77-114 (264)
61 1zbd_B Rabphilin-3A; G protein 96.6 0.008 2.8E-07 46.2 7.6 54 61-118 54-108 (134)
62 1v88_A Oxysterol binding prote 96.5 0.0025 8.6E-08 48.2 4.5 24 15-38 101-124 (130)
63 2dfk_A Collybistin II; DH doma 96.5 0.0036 1.2E-07 55.4 6.1 40 3-42 326-367 (402)
64 2pz1_A RHO guanine nucleotide 96.4 0.0046 1.6E-07 55.6 6.4 41 2-42 402-444 (466)
65 2dtc_A RAL guanine nucleotide 96.4 0.0049 1.7E-07 46.9 5.4 37 3-39 75-113 (126)
66 1kz7_A Guanine nucleotide exch 96.3 0.0064 2.2E-07 52.8 6.3 40 3-42 288-329 (353)
67 4a6h_A Phosphatidylinositol 4, 96.2 0.0062 2.1E-07 45.5 5.1 35 3-37 76-117 (120)
68 2d9w_A Docking protein 2; PH d 96.1 0.0071 2.4E-07 46.2 5.0 34 2-36 86-119 (127)
69 2rgn_B RHOA/RAC/CDC42 exchange 96.0 0.01 3.5E-07 51.6 6.1 38 3-40 278-320 (354)
70 3jzy_A Intersectin 2; C2 domai 95.9 0.0012 4.2E-08 59.4 0.0 41 2-42 326-366 (510)
71 1dyn_A Dynamin; signal transdu 95.8 0.0083 2.9E-07 45.7 4.1 33 4-36 75-115 (125)
72 2zet_C Melanophilin; complex, 95.5 0.0046 1.6E-07 48.6 1.7 51 61-118 67-118 (153)
73 3lju_X ARF-GAP with dual PH do 94.9 0.033 1.1E-06 49.4 5.6 40 3-42 207-250 (386)
74 1wff_A Riken cDNA 2810002D23 p 94.7 0.043 1.5E-06 39.1 4.7 32 59-93 22-53 (85)
75 1wfh_A Zinc finger (AN1-like) 94.5 0.026 8.9E-07 38.1 3.0 30 60-93 13-42 (64)
76 1wfl_A Zinc finger protein 216 93.9 0.059 2E-06 37.3 3.8 29 61-93 24-52 (74)
77 1wg2_A Zinc finger (AN1-like) 93.4 0.06 2E-06 36.3 3.1 29 61-93 14-42 (64)
78 1wfp_A Zinc finger (AN1-like) 93.0 0.086 2.9E-06 36.5 3.4 31 59-93 22-52 (74)
79 3ksy_A SOS-1, SON of sevenless 92.9 0.1 3.5E-06 51.8 5.3 38 2-39 509-547 (1049)
80 3a8n_A TIAM-1, T-lymphoma inva 92.7 0.064 2.2E-06 45.9 3.1 36 4-39 89-125 (279)
81 2a20_A Regulating synaptic mem 91.7 0.15 5.3E-06 33.8 3.3 54 60-117 7-60 (62)
82 1x4w_A Hypothetical protein FL 90.1 0.12 4.2E-06 35.1 1.7 32 60-93 13-45 (67)
83 2ys3_A UNC-112-related protein 89.0 0.59 2E-05 35.9 5.0 33 4-36 74-110 (137)
84 2csz_A Synaptotagmin-like prot 88.2 0.25 8.4E-06 34.4 2.2 50 61-118 24-74 (76)
85 2ecm_A Ring finger and CHY zin 85.0 0.57 1.9E-05 28.9 2.5 37 61-98 4-40 (55)
86 2egp_A Tripartite motif-contai 84.8 0.21 7.2E-06 33.3 0.4 54 61-119 11-64 (79)
87 2e72_A POGO transposable eleme 82.5 0.23 7.8E-06 31.5 -0.2 33 55-89 6-40 (49)
88 1iym_A EL5; ring-H2 finger, ub 81.6 0.96 3.3E-05 27.8 2.5 47 61-115 4-50 (55)
89 2jrp_A Putative cytoplasmic pr 80.4 0.77 2.6E-05 32.2 1.9 58 63-122 3-65 (81)
90 1z60_A TFIIH basal transcripti 79.8 0.22 7.4E-06 33.0 -1.1 31 62-94 15-45 (59)
91 2ysl_A Tripartite motif-contai 79.4 0.25 8.6E-06 32.4 -0.9 50 61-119 19-68 (73)
92 1mai_A Phospholipase C delta-1 79.1 2.9 0.0001 30.9 4.9 36 5-40 86-123 (131)
93 3lrq_A E3 ubiquitin-protein li 78.8 0.48 1.6E-05 33.5 0.4 48 62-119 22-69 (100)
94 2ect_A Ring finger protein 126 78.8 1 3.6E-05 29.8 2.1 51 61-120 14-64 (78)
95 1bor_A Transcription factor PM 77.0 2.1 7.2E-05 26.8 3.1 43 60-117 4-46 (56)
96 4ejn_A RAC-alpha serine/threon 75.7 1.6 5.5E-05 38.1 3.0 37 4-40 70-110 (446)
97 1jm7_B BARD1, BRCA1-associated 75.4 0.97 3.3E-05 32.7 1.3 44 62-118 22-65 (117)
98 2ecn_A Ring finger protein 141 75.1 0.44 1.5E-05 31.0 -0.6 47 61-120 14-60 (70)
99 2ct2_A Tripartite motif protei 73.7 1.1 3.7E-05 30.2 1.1 54 61-119 14-67 (88)
100 2d9z_A Protein kinase C, NU ty 73.1 6.7 0.00023 29.7 5.5 36 3-38 73-123 (129)
101 3l11_A E3 ubiquitin-protein li 71.1 1.1 3.6E-05 32.3 0.5 47 62-119 15-61 (115)
102 3fl2_A E3 ubiquitin-protein li 70.9 0.5 1.7E-05 34.6 -1.3 48 62-120 52-99 (124)
103 2ecv_A Tripartite motif-contai 70.9 2 6.8E-05 28.4 1.9 54 61-120 18-71 (85)
104 2ysj_A Tripartite motif-contai 70.2 1.4 4.9E-05 27.9 1.0 33 61-98 19-51 (63)
105 1weo_A Cellulose synthase, cat 69.9 1.3 4.5E-05 31.7 0.8 38 57-95 11-51 (93)
106 2yur_A Retinoblastoma-binding 69.8 2 6.8E-05 28.3 1.7 47 61-116 14-60 (74)
107 2d8t_A Dactylidin, ring finger 67.7 1.7 5.9E-05 28.3 1.0 47 61-119 14-60 (71)
108 1x4v_A Hypothetical protein LO 67.3 3.5 0.00012 27.4 2.4 28 61-92 11-40 (63)
109 1wys_A Riken cDNA 2310008M20 p 66.5 4.7 0.00016 27.7 3.0 30 61-94 13-44 (75)
110 1fho_A UNC-89; pleckstrin homo 66.5 0.79 2.7E-05 34.1 -1.0 35 6-40 75-114 (119)
111 1chc_A Equine herpes virus-1 r 65.6 3 0.0001 26.7 1.8 47 61-118 4-50 (68)
112 2djb_A Polycomb group ring fin 63.8 1.7 5.9E-05 28.4 0.4 49 61-120 14-62 (72)
113 2ckl_B Ubiquitin ligase protei 63.1 1.7 5.7E-05 33.3 0.2 47 63-119 55-101 (165)
114 1x4j_A Ring finger protein 38; 63.0 5.2 0.00018 26.1 2.7 48 61-117 22-69 (75)
115 2ecl_A Ring-box protein 2; RNF 62.6 3.8 0.00013 27.6 2.0 58 53-118 6-74 (81)
116 2ckl_A Polycomb group ring fin 62.5 1.8 6E-05 30.7 0.2 48 62-120 15-62 (108)
117 2ecy_A TNF receptor-associated 62.5 0.31 1E-05 31.6 -3.6 48 61-119 14-61 (66)
118 1v87_A Deltex protein 2; ring- 62.1 0.98 3.3E-05 32.3 -1.2 56 62-120 25-94 (114)
119 1twf_L ABC10-alpha, DNA-direct 61.2 2.9 0.0001 28.3 1.2 26 61-87 27-53 (70)
120 2ep4_A Ring finger protein 24; 60.9 2.8 9.7E-05 27.3 1.1 51 60-119 13-63 (74)
121 2y43_A E3 ubiquitin-protein li 60.7 2.1 7.3E-05 29.7 0.4 47 62-119 22-68 (99)
122 2ea6_A Ring finger protein 4; 60.1 1.5 5.2E-05 27.9 -0.4 50 60-117 13-65 (69)
123 3ng2_A RNF4, snurf, ring finge 58.6 1.6 5.5E-05 28.1 -0.5 51 61-119 9-62 (71)
124 2ct7_A Ring finger protein 31; 58.5 4.7 0.00016 27.8 1.9 33 63-96 26-60 (86)
125 2csy_A Zinc finger protein 183 58.3 3.3 0.00011 27.6 1.0 46 61-118 14-59 (81)
126 3j20_Y 30S ribosomal protein S 58.2 5 0.00017 25.3 1.8 29 61-89 18-47 (50)
127 2kiz_A E3 ubiquitin-protein li 56.0 4.3 0.00015 26.0 1.3 52 60-120 12-63 (69)
128 2xeu_A Ring finger protein 4; 55.7 1.9 6.5E-05 27.0 -0.5 50 61-118 2-54 (64)
129 2ecj_A Tripartite motif-contai 54.6 3.3 0.00011 25.4 0.5 32 61-97 14-45 (58)
130 2jne_A Hypothetical protein YF 54.5 4.4 0.00015 29.4 1.2 57 62-120 32-93 (101)
131 4gzn_C ZFP-57, zinc finger pro 54.5 5.2 0.00018 25.5 1.5 25 64-89 6-42 (60)
132 3ztg_A E3 ubiquitin-protein li 53.8 4.2 0.00014 27.6 1.0 49 61-118 12-60 (92)
133 1jm7_A BRCA1, breast cancer ty 53.0 3.5 0.00012 28.9 0.5 48 63-119 22-69 (112)
134 2coa_A Protein kinase C, D2 ty 52.6 9.1 0.00031 28.8 2.7 36 3-38 73-119 (125)
135 4ayb_P DNA-directed RNA polyme 51.9 8.7 0.0003 24.1 2.1 24 64-88 5-32 (48)
136 1wfe_A Riken cDNA 2310008M20 p 51.4 5.3 0.00018 28.1 1.2 29 61-93 24-54 (86)
137 4a0k_B E3 ubiquitin-protein li 51.3 3.6 0.00012 30.4 0.3 56 54-117 40-109 (117)
138 1t1h_A Gspef-atpub14, armadill 51.3 3.7 0.00013 27.0 0.3 48 61-119 7-54 (78)
139 3jyw_9 60S ribosomal protein L 48.7 8.4 0.00029 26.3 1.8 28 61-91 25-56 (72)
140 2c2l_A CHIP, carboxy terminus 48.6 30 0.001 27.7 5.6 47 62-119 208-254 (281)
141 2lv2_A Insulinoma-associated p 48.3 8.1 0.00028 26.4 1.8 28 61-89 27-66 (85)
142 3uk3_C Zinc finger protein 217 48.1 11 0.00038 22.2 2.3 12 63-75 5-16 (57)
143 2l0b_A E3 ubiquitin-protein li 47.6 3.9 0.00013 28.1 -0.0 49 61-118 39-87 (91)
144 3hcj_A MSRB, peptide methionin 46.8 4.9 0.00017 31.4 0.4 54 16-70 4-58 (154)
145 3j21_i 50S ribosomal protein L 46.3 8.8 0.0003 26.9 1.7 28 62-92 35-66 (83)
146 2jmo_A Parkin; IBR, E3 ligase, 45.3 21 0.00073 24.1 3.6 39 57-96 20-67 (80)
147 2gqj_A Zinc finger protein KIA 45.3 5.5 0.00019 27.1 0.5 12 62-74 24-35 (98)
148 3iz5_m 60S ribosomal protein L 45.1 11 0.00036 27.0 2.0 28 62-92 36-67 (92)
149 3izc_m 60S ribosomal protein R 45.0 11 0.00036 27.0 1.9 28 62-92 36-67 (92)
150 3knv_A TNF receptor-associated 44.6 5.2 0.00018 30.1 0.3 47 61-118 30-76 (141)
151 1bbo_A Human enhancer-binding 44.4 14 0.00048 21.7 2.3 11 64-75 3-13 (57)
152 2lce_A B-cell lymphoma 6 prote 44.2 18 0.00063 22.6 3.0 14 61-75 16-29 (74)
153 1wd2_A Ariadne-1 protein homol 44.1 15 0.00051 23.7 2.5 36 61-97 5-44 (60)
154 4ayc_A E3 ubiquitin-protein li 44.1 5 0.00017 29.7 0.1 44 63-118 54-97 (138)
155 2ayj_A 50S ribosomal protein L 43.8 7.7 0.00026 25.2 1.0 24 61-87 18-41 (56)
156 2adr_A ADR1; transcription reg 43.0 15 0.0005 21.9 2.2 11 64-75 4-14 (60)
157 1vd4_A Transcription initiatio 42.7 5.6 0.00019 24.8 0.2 12 63-75 15-26 (62)
158 2ecw_A Tripartite motif-contai 42.5 12 0.00041 24.4 1.9 53 61-119 18-70 (85)
159 3cc2_Z 50S ribosomal protein L 42.1 8.2 0.00028 28.7 1.0 29 61-92 59-91 (116)
160 1z6u_A NP95-like ring finger p 41.9 6.8 0.00023 29.7 0.6 47 63-120 79-125 (150)
161 3j21_g 50S ribosomal protein L 41.9 9.8 0.00033 24.2 1.2 25 61-88 13-37 (51)
162 2fc7_A ZZZ3 protein; structure 41.9 19 0.00064 24.8 2.8 32 63-96 22-57 (82)
163 2lcq_A Putative toxin VAPC6; P 41.1 9.7 0.00033 29.1 1.3 24 63-87 133-156 (165)
164 3c5k_A HD6, histone deacetylas 41.0 18 0.00062 26.2 2.7 27 62-93 24-50 (109)
165 3hct_A TNF receptor-associated 40.7 7.2 0.00025 27.9 0.5 48 61-119 17-64 (118)
166 2cot_A Zinc finger protein 435 40.4 45 0.0015 20.8 4.5 14 61-75 17-30 (77)
167 1e4u_A Transcriptional repress 39.5 10 0.00035 25.6 1.1 52 61-120 10-62 (78)
168 1wil_A KIAA1045 protein; ring 38.8 14 0.00048 26.1 1.8 30 63-95 16-45 (89)
169 2d8v_A Zinc finger FYVE domain 37.5 17 0.00058 24.4 1.9 27 61-93 7-34 (67)
170 2k2d_A Ring finger and CHY zin 37.4 8.2 0.00028 26.6 0.4 12 64-76 39-50 (79)
171 1wim_A KIAA0161 protein; ring 37.1 9.8 0.00034 26.0 0.7 54 62-117 5-61 (94)
172 2kvh_A Zinc finger and BTB dom 36.8 13 0.00044 18.1 1.0 11 79-89 3-13 (27)
173 4ap4_A E3 ubiquitin ligase RNF 36.7 5.5 0.00019 28.4 -0.7 52 60-119 70-124 (133)
174 1x5w_A Zinc finger protein 64, 36.1 15 0.00053 22.7 1.5 12 63-75 10-21 (70)
175 1rmd_A RAG1; V(D)J recombinati 36.1 9.5 0.00033 27.0 0.5 47 62-119 23-69 (116)
176 1ffk_W Ribosomal protein L37AE 35.4 18 0.00061 24.6 1.8 29 61-92 26-58 (73)
177 1x6e_A Zinc finger protein 24; 35.2 16 0.00056 22.8 1.6 13 62-75 14-26 (72)
178 4a17_Y RPL37A, 60S ribosomal p 35.1 11 0.00037 27.4 0.7 29 62-93 36-68 (103)
179 3hcs_A TNF receptor-associated 34.4 9.3 0.00032 29.0 0.3 33 61-98 17-49 (170)
180 2kvf_A Zinc finger and BTB dom 34.3 15 0.00053 17.9 1.1 11 79-89 3-13 (28)
181 3t6p_A Baculoviral IAP repeat- 34.3 19 0.00064 31.3 2.2 44 61-120 294-338 (345)
182 2d9h_A Zinc finger protein 692 34.2 15 0.00052 23.2 1.3 12 63-75 8-19 (78)
183 2k4x_A 30S ribosomal protein S 34.2 22 0.00075 22.6 2.0 27 62-88 18-45 (55)
184 2m0d_A Zinc finger and BTB dom 33.6 16 0.00053 17.9 1.1 11 79-89 3-13 (30)
185 2ctu_A Zinc finger protein 483 33.3 9 0.00031 23.6 0.0 9 64-73 20-28 (73)
186 1ard_A Yeast transcription fac 33.0 13 0.00046 18.1 0.7 10 80-89 3-12 (29)
187 1vq8_Z 50S ribosomal protein L 32.9 14 0.00048 25.7 1.0 31 62-92 27-58 (83)
188 3ulb_A Target of rapamycin com 32.7 1E+02 0.0035 22.9 5.7 37 3-39 73-115 (121)
189 1rik_A E6APC1 peptide; E6-bind 32.6 17 0.00056 17.8 1.0 10 80-89 3-12 (29)
190 2yu4_A E3 SUMO-protein ligase 31.9 11 0.00037 26.0 0.3 32 63-98 8-39 (94)
191 4ic3_A E3 ubiquitin-protein li 31.9 4.6 0.00016 26.7 -1.7 41 63-119 25-66 (74)
192 2ctd_A Zinc finger protein 512 31.1 15 0.00052 25.1 0.9 10 63-73 35-44 (96)
193 1g25_A CDK-activating kinase a 31.1 6.9 0.00024 24.7 -0.9 48 63-119 4-54 (65)
194 2m0f_A Zinc finger and BTB dom 30.8 18 0.00062 17.5 1.0 10 80-89 3-12 (29)
195 2kdx_A HYPA, hydrogenase/ureas 30.5 18 0.00063 26.2 1.3 22 64-86 75-97 (119)
196 2y1n_A E3 ubiquitin-protein li 30.4 13 0.00046 32.9 0.6 47 63-120 333-379 (389)
197 2lvu_A Zinc finger and BTB dom 36.5 11 0.00037 18.3 0.0 10 80-89 3-12 (26)
198 2kvg_A Zinc finger and BTB dom 30.3 16 0.00053 18.0 0.7 11 79-89 3-13 (27)
199 1vq8_1 50S ribosomal protein L 29.9 24 0.00081 22.9 1.6 7 82-88 20-26 (57)
200 2lk0_A RNA-binding protein 5; 29.9 19 0.00066 20.3 1.0 20 65-87 8-27 (32)
201 3k7a_M Transcription initiatio 29.6 28 0.00096 29.8 2.6 15 56-70 14-29 (345)
202 2k1p_A Zinc finger RAN-binding 29.6 31 0.001 19.5 1.9 21 64-87 8-28 (33)
203 3dpl_R Ring-box protein 1; ubi 29.4 17 0.00059 26.0 1.0 56 54-117 29-98 (106)
204 2m0e_A Zinc finger and BTB dom 29.2 19 0.00063 17.4 0.9 10 80-89 3-12 (29)
205 2dmd_A Zinc finger protein 64, 29.2 27 0.00091 22.8 1.9 12 63-75 9-20 (96)
206 2els_A Zinc finger protein 406 28.3 22 0.00075 18.6 1.1 12 78-89 8-19 (36)
207 3h0g_L DNA-directed RNA polyme 27.7 35 0.0012 22.5 2.2 26 61-87 20-46 (63)
208 2ct1_A Transcriptional repress 27.4 25 0.00086 22.1 1.4 12 63-75 16-27 (77)
209 2jox_A Churchill protein; zinc 27.3 23 0.0008 25.6 1.4 27 63-89 27-67 (106)
210 1gh9_A 8.3 kDa protein (gene M 27.3 17 0.0006 24.5 0.6 10 79-89 21-30 (71)
211 2fiy_A Protein FDHE homolog; F 27.3 22 0.00075 30.5 1.4 61 61-121 181-266 (309)
212 1k81_A EIF-2-beta, probable tr 27.2 15 0.00052 21.3 0.3 24 64-88 2-30 (36)
213 1dl6_A Transcription factor II 26.9 33 0.0011 21.9 1.9 7 64-70 13-19 (58)
214 2eps_A POZ-, at HOOK-, and zin 26.7 24 0.00083 20.8 1.2 12 63-75 13-24 (54)
215 6rxn_A Rubredoxin; electron tr 26.3 21 0.00073 22.0 0.9 12 78-89 3-14 (46)
216 1klr_A Zinc finger Y-chromosom 26.1 20 0.00067 17.4 0.6 10 80-89 3-12 (30)
217 2elx_A Zinc finger protein 406 26.1 25 0.00086 18.0 1.1 12 78-89 6-17 (35)
218 1paa_A Yeast transcription fac 25.7 21 0.00073 17.5 0.7 10 80-89 3-12 (30)
219 1pft_A TFIIB, PFTFIIBN; N-term 25.5 21 0.00072 21.7 0.7 7 64-70 7-13 (50)
220 4hc9_A Trans-acting T-cell-spe 25.1 24 0.00082 25.9 1.1 33 88-120 60-92 (115)
221 3tca_A Amyloid beta A4 precurs 25.0 15 0.00052 29.8 0.0 28 15-42 2-29 (291)
222 2kwq_A Protein MCM10 homolog; 24.5 20 0.00069 25.4 0.6 8 64-71 17-24 (92)
223 2ea5_A Cell growth regulator w 24.4 30 0.001 22.4 1.4 44 61-120 14-58 (68)
224 2elv_A Zinc finger protein 406 24.3 29 0.001 18.1 1.1 12 78-89 8-19 (36)
225 1qxf_A GR2, 30S ribosomal prot 24.3 33 0.0011 22.9 1.5 28 64-91 9-38 (66)
226 3htk_C E3 SUMO-protein ligase 24.1 18 0.00062 30.5 0.3 49 62-119 181-231 (267)
227 1yk4_A Rubredoxin, RD; electro 24.0 24 0.00081 22.3 0.8 13 79-91 2-14 (52)
228 2elr_A Zinc finger protein 406 24.0 24 0.00081 18.3 0.7 12 78-89 8-19 (36)
229 2vje_A E3 ubiquitin-protein li 23.7 11 0.00039 24.1 -0.8 35 59-96 5-40 (64)
230 2lvt_A Zinc finger and BTB dom 29.5 17 0.00057 17.9 0.0 10 80-89 3-12 (29)
231 1srk_A Zinc finger protein ZFP 23.1 31 0.0011 17.8 1.1 12 78-89 6-17 (35)
232 2elt_A Zinc finger protein 406 23.1 30 0.001 17.9 1.0 12 78-89 8-19 (36)
233 3cw2_K Translation initiation 22.9 37 0.0013 25.8 1.8 25 63-88 104-133 (139)
234 2epr_A POZ-, at HOOK-, and zin 22.7 30 0.001 19.6 1.1 12 63-75 13-24 (48)
235 2ecg_A Baculoviral IAP repeat- 22.5 18 0.00063 23.6 0.0 42 63-120 26-68 (75)
236 2dmi_A Teashirt homolog 3; zin 22.5 41 0.0014 22.7 1.9 8 65-73 53-60 (115)
237 1tot_A CREB-binding protein; z 22.4 11 0.00039 23.7 -1.0 21 63-87 7-27 (52)
238 2elp_A Zinc finger protein 406 22.0 33 0.0011 18.0 1.0 12 78-89 8-19 (37)
239 1wjw_A Phosphoacetylglucosamin 22.0 2.1E+02 0.0073 20.1 6.9 46 3-48 54-104 (112)
240 1d4u_A Nucleotide excision rep 21.9 54 0.0019 23.9 2.5 12 106-117 24-35 (111)
241 3v5w_A G-protein coupled recep 21.8 2.3E+02 0.0079 26.8 7.4 35 5-39 618-653 (689)
242 2kmk_A Zinc finger protein GFI 21.7 39 0.0013 21.0 1.6 11 63-74 30-40 (82)
243 1llm_C Chimera of ZIF23-GCN4; 21.6 39 0.0013 21.8 1.5 11 64-75 5-15 (88)
244 2lt7_A Transcriptional regulat 21.6 33 0.0011 24.9 1.3 10 64-74 24-33 (133)
245 2ee8_A Protein ODD-skipped-rel 21.6 45 0.0015 22.1 1.9 27 62-89 17-55 (106)
246 2elq_A Zinc finger protein 406 21.5 34 0.0012 17.8 1.0 12 78-89 8-19 (36)
247 2elo_A Zinc finger protein 406 21.4 24 0.00081 18.5 0.3 12 78-89 8-19 (37)
248 3j20_W 30S ribosomal protein S 21.2 43 0.0015 22.1 1.6 28 64-91 17-46 (63)
249 2fqm_A Phosphoprotein, P prote 21.2 1.5E+02 0.0051 19.9 4.3 29 11-39 15-46 (75)
250 1a1h_A QGSR zinc finger peptid 20.6 42 0.0014 21.4 1.5 10 64-74 36-45 (90)
251 3iuf_A Zinc finger protein UBI 20.6 35 0.0012 19.6 1.0 13 78-90 6-18 (48)
252 1rim_A E6APC2 peptide; E6-bind 20.6 30 0.001 18.0 0.7 10 80-89 3-12 (33)
253 2v3b_B Rubredoxin 2, rubredoxi 20.4 31 0.0011 21.9 0.8 14 78-91 2-15 (55)
254 2epq_A POZ-, at HOOK-, and zin 20.1 40 0.0014 18.6 1.2 12 63-75 11-22 (45)
255 1x6h_A Transcriptional repress 20.1 45 0.0015 21.0 1.6 12 63-75 16-27 (86)
No 1
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=99.93 E-value=6.6e-27 Score=210.30 Aligned_cols=118 Identities=24% Similarity=0.604 Sum_probs=33.7
Q ss_pred CCcceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHHHHhcC--------------CCCCCCCCCccccCCCCCcccc
Q psy8222 2 ELRNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDLLRKSG--------------KKPAATHAAVWIPDNEAAVCMH 67 (198)
Q Consensus 2 ~~~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~~g--------------~~~~~~~~~~Wv~d~~~~~C~~ 67 (198)
.++|+|.|.++.++|.|+|.|++||+.|+++|+++|........ ..+....+|.|+||..+..|+.
T Consensus 301 ~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~~~~~~~~~f~~~~e~~~~~~~~~~~~~p~w~~~~~~~~c~~ 380 (434)
T 3mpx_A 301 KVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPEDYKAQALAAFHHSVEIRERLGVSLGERPPTLVPVTHVMMCMN 380 (434)
T ss_dssp TSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC---------------------------------------------
T ss_pred CCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHHHhhhcccccCCccchhhcccCccccCCCcCCCcccCCcCCC
Confidence 46899999999999999999999999999999999986432211 1123446789999999999999
Q ss_pred CCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 68 CKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 68 C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
|+. +|+++.||||||.||.|||..||.+++++|..+.+++|||+.||..+..
T Consensus 381 c~~-~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l~~ 432 (434)
T 3mpx_A 381 CGC-DFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGELKK 432 (434)
T ss_dssp -----------------------------------------------------
T ss_pred cCC-CCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHHHh
Confidence 999 9999999999999999999999999999987777999999999998864
No 2
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=99.87 E-value=3.7e-23 Score=149.29 Aligned_cols=72 Identities=39% Similarity=0.851 Sum_probs=66.6
Q ss_pred CCCCCccccCCCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCC-CCCeeeccchHHhhcccc
Q psy8222 50 ATHAAVWIPDNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQS-AKPLRVCLTCYDVLSRDK 122 (198)
Q Consensus 50 ~~~~~~Wv~d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~-~~~~RVC~~C~~~l~~~~ 122 (198)
.+..+.|+||.++..|+.|++ +|++++||||||.||+|||+.||.++++||..+ .+++|||+.||..|....
T Consensus 9 ~~~~~~W~pd~~~~~C~~C~~-~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~~ 81 (84)
T 1z2q_A 9 KQSKGYWQEDEDAPACNGCGC-VFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRSSN 81 (84)
T ss_dssp TCCCSCCCCTTTCCBCTTTCC-BCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHTSC
T ss_pred cCCCCccccCCCCCCCcCcCC-ccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhhcc
Confidence 455789999999999999999 999999999999999999999999999999987 599999999999987653
No 3
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=9.7e-23 Score=147.06 Aligned_cols=68 Identities=29% Similarity=0.680 Sum_probs=63.0
Q ss_pred CCccccCCCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCC-------CCeeeccchHHhhccc
Q psy8222 53 AAVWIPDNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSA-------KPLRVCLTCYDVLSRD 121 (198)
Q Consensus 53 ~~~Wv~d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~-------~~~RVC~~C~~~l~~~ 121 (198)
.+.|+||.++..|+.|.+ +|++++||||||+||+|||+.|+.++++||..+. +++|||+.||..|...
T Consensus 5 ~~~W~pd~~~~~C~~C~~-~F~~~~RrHHCR~CG~vfC~~Cs~~~~~l~~~g~~~p~~~~~~~RVC~~C~~~l~~~ 79 (84)
T 1x4u_A 5 SSGRYPTNNFGNCTGCSA-TFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSKS 79 (84)
T ss_dssp CCCSCSCCCCSSCSSSCC-CCCSSSCCEECSSSCCEECTTTSCEEECSTTTSCCCSSCSSCCEEECHHHHHHHHSC
T ss_pred CCccccCCCCCcCcCcCC-ccccchhhhhhcCCCcEEChhhcCCceecccccccCccccCCccEECHHHHHHHhcc
Confidence 578999999999999999 9999999999999999999999999999987653 6899999999998764
No 4
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=99.85 E-value=4.4e-22 Score=143.06 Aligned_cols=67 Identities=40% Similarity=1.028 Sum_probs=58.0
Q ss_pred CCccccCCCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhccc
Q psy8222 53 AAVWIPDNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSRD 121 (198)
Q Consensus 53 ~~~Wv~d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~~ 121 (198)
.+.|+||.++..|+.|++ +|++++||||||.||.|||+.|+.++++||.. .+++|||+.||..|...
T Consensus 10 ~~~W~~d~~~~~C~~C~~-~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~~~-~~~~RVC~~C~~~l~~~ 76 (82)
T 2yw8_A 10 GHAWLKDDEATHCRQCEK-EFSISRRKHHCRNCGHIFCNTCSSNELALPSY-PKPVRVCDSCHTLLLQR 76 (82)
T ss_dssp -----CCCCCCBCTTTCC-BCBTTBCCEECTTTCCEECSGGGCEEECCTTC-SSCEEECHHHHHHTTC-
T ss_pred CCccccCccCCcccCcCC-cccCccccccCCCCCCEEChHHhCCeeecCCC-CCcCEECHHHHHHHHHh
Confidence 478999999999999999 99999999999999999999999999999873 68999999999988754
No 5
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=99.84 E-value=3.7e-22 Score=145.90 Aligned_cols=73 Identities=41% Similarity=0.983 Sum_probs=65.7
Q ss_pred CCCCCccccCCCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcccccC
Q psy8222 50 ATHAAVWIPDNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSRDKTV 124 (198)
Q Consensus 50 ~~~~~~Wv~d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~~~~~ 124 (198)
...+|.|++|.++..|+.|.+ +|++++||||||+||.|||..|+.+++++|.. .+++|||+.||..|......
T Consensus 8 ~~~~p~W~~d~~~~~C~~C~~-~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~-~~~~RVC~~C~~~l~~~~~~ 80 (90)
T 3t7l_A 8 GQKQPTWVPDSEAPNCMNCQV-KFTFTKRRHHCRACGKVFCGVCCNRKCKLQYL-EKEARVCVVCYETISKAQAF 80 (90)
T ss_dssp TTSCCCCCCGGGCCBCTTTCC-BCCSSSCCEECTTTCCEECGGGSCEEEEETTT-TEEEEECHHHHHHHHHHC--
T ss_pred CCCCCcCcccccCCcCcCCCC-cccchhhCccccCCCCEECCcccCCeeecCCC-CCCCeECHHHHHHHHHHhhh
Confidence 456789999999999999999 99999999999999999999999999999874 48999999999999876543
No 6
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=99.83 E-value=5e-22 Score=153.30 Aligned_cols=65 Identities=51% Similarity=1.072 Sum_probs=61.2
Q ss_pred CCccccCCCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 53 AAVWIPDNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 53 ~~~Wv~d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
++.|+||.++..|+.|++ +|++++||||||.||.|||+.||.+++++|. ..+|+|||+.||..|+
T Consensus 60 ~~~W~~d~~~~~C~~C~~-~Fs~~~RrHHCR~CG~vfC~~Cs~~~~~~p~-~~~p~RVC~~C~~~l~ 124 (125)
T 1joc_A 60 NRKWAEDNEVQNCMACGK-GFSVTVRRHHCRQCGNIFCAECSAKNALTPS-SKKPVRVCDACFNDLQ 124 (125)
T ss_dssp HCCCCCGGGCCBCTTTCC-BCCSSSCCEECTTTCCEECGGGSCEEECCTT-CSSCEEECHHHHHHTT
T ss_pred CCccccCCCCCCCcCcCC-ccccccccccCCCCCeEEChHHhCCccccCC-CCCCCEeCHHHHHHhc
Confidence 578999999999999999 9999999999999999999999999998886 4699999999999875
No 7
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=99.83 E-value=6.5e-22 Score=139.23 Aligned_cols=67 Identities=37% Similarity=0.890 Sum_probs=58.2
Q ss_pred CCCCccccCCCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCC-CCeeeccchHHhhccc
Q psy8222 51 THAAVWIPDNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSA-KPLRVCLTCYDVLSRD 121 (198)
Q Consensus 51 ~~~~~Wv~d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~-~~~RVC~~C~~~l~~~ 121 (198)
+.++.|+++ ..|+.|++ +|++++||||||.||+|||+.|+.++++||..+. +++|||+.||..+...
T Consensus 3 ~~~p~W~~~---~~C~~C~~-~F~~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~i 70 (73)
T 1vfy_A 3 KTPADWIDS---DACMICSK-KFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYEFI 70 (73)
T ss_dssp ----CCCCC---SBCTTTCC-BCBTTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHHHHHHH
T ss_pred CCCCcCccC---CcccCCCC-ccCCccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHHHHHHH
Confidence 347899986 48999999 9999999999999999999999999999998875 8999999999988653
No 8
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=99.79 E-value=5e-20 Score=134.11 Aligned_cols=62 Identities=26% Similarity=0.687 Sum_probs=58.0
Q ss_pred CCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcccc
Q psy8222 60 NEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSRDK 122 (198)
Q Consensus 60 ~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~~~ 122 (198)
.++..|+.|.+ +|++++||||||.||+|||+.|+.++++||..+.+++|||+.||..|....
T Consensus 7 ~~~~~C~~C~~-~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~~l~~~~ 68 (88)
T 1wfk_A 7 GMESRCYGCAV-KFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTILTRGS 68 (88)
T ss_dssp CCCSBCTTTCC-BCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHHHHHCC
T ss_pred CcCCCCcCcCC-cccCccccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHHHHHhcc
Confidence 46789999999 999999999999999999999999999999988899999999999998754
No 9
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=99.78 E-value=1.3e-19 Score=151.16 Aligned_cols=94 Identities=35% Similarity=0.770 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHH---------HHHHHHHHhcCCC-CC---------CCCCCccccCCCCCccccCCccCCCcccccccc
Q psy8222 22 TSTEKQEWMAHIN---------KCIEDLLRKSGKK-PA---------ATHAAVWIPDNEAAVCMHCKRTQFTVLSRRHHC 82 (198)
Q Consensus 22 s~~Ek~~Wi~~i~---------~~i~~ll~~~g~~-~~---------~~~~~~Wv~d~~~~~C~~C~~~~Fs~~~RrhhC 82 (198)
..+..++|...+. ++...| ...|.. |. .+.++.|+++ ..|+.|++ +|++++|||||
T Consensus 106 il~li~~W~~~f~~~~~~~~i~~~y~~L-k~~G~~FP~~~e~~a~f~~~~~~~W~~~---~~C~~C~~-~F~~~~rrhhC 180 (220)
T 1dvp_A 106 MLELVQTWAYAFRSSDKYQAIKDTMTIL-KAKGHTFPELREADAMFTADTAPNWADG---RVCHRCRV-EFTFTNRKHHC 180 (220)
T ss_dssp HHHHHHHHHHHTTTCSSCCHHHHHHHHH-HHTTCCCCCCCC---CCCCSCCCCCCCC---SBCTTTCC-BCCSSSCCEEC
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHH-hhcCccccccccccccccccccccCCCC---CccCCCCC-ccCCccccccc
Confidence 3456778887764 444444 344422 11 2347899975 69999999 99999999999
Q ss_pred ccCCceEeCCCCCCeeecCCCCC-CCeeeccchHHhhcc
Q psy8222 83 RKCGSVVCAPCSNKRFLLPSQSA-KPLRVCLTCYDVLSR 120 (198)
Q Consensus 83 r~CG~vvC~~Cs~~~~~lp~~~~-~~~RVC~~C~~~l~~ 120 (198)
|.||.|||+.||.++.++|..+. +++|||+.||..|+.
T Consensus 181 r~CG~v~C~~Cs~~~~~~~~~~~~~~~RvC~~C~~~l~~ 219 (220)
T 1dvp_A 181 RNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCFAALQR 219 (220)
T ss_dssp TTTCCEECSTTSCEEEEEGGGTEEEEEEECHHHHHHHHH
T ss_pred CCcCCEEChHHhCCeeecCcCCCCCCCEeCHHHHHHHhc
Confidence 99999999999999999998764 999999999998864
No 10
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=99.78 E-value=1.6e-19 Score=151.56 Aligned_cols=69 Identities=41% Similarity=0.944 Sum_probs=61.0
Q ss_pred CCCCCccccCCCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCC-CCeeeccchHHhhcccc
Q psy8222 50 ATHAAVWIPDNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSA-KPLRVCLTCYDVLSRDK 122 (198)
Q Consensus 50 ~~~~~~Wv~d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~-~~~RVC~~C~~~l~~~~ 122 (198)
.+.+|.|+++ ..|+.|++ +|++++||||||+||.|||+.||.++.++|..+. +++|||+.||..|....
T Consensus 155 ~~~~p~W~~~---~~C~~C~~-~F~~~~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~C~~~l~~~~ 224 (226)
T 3zyq_A 155 AERAPDWVDA---EECHRCRV-QFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNRKA 224 (226)
T ss_dssp CCCCCCCCCC---SBCTTTCC-BCBTTBCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHHHHHHHCC--
T ss_pred cccccccccC---CCCcCcCC-CCCccccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHHHHHHhhhhc
Confidence 4458999975 58999999 9999999999999999999999999999998764 89999999999987653
No 11
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=99.71 E-value=1.3e-18 Score=133.26 Aligned_cols=65 Identities=22% Similarity=0.467 Sum_probs=44.5
Q ss_pred CCCCCCccccCCCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhccc
Q psy8222 49 AATHAAVWIPDNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSRD 121 (198)
Q Consensus 49 ~~~~~~~Wv~d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~~ 121 (198)
...+.+.|.||..+..|+.|+. +|++++||||||+||.|||+.||.++++ ++|||+.||..+...
T Consensus 6 ~~~~~~~~~Pd~~~~~C~~C~~-~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~-------~vRVC~~C~~~~~~~ 70 (120)
T 1y02_A 6 NPGYSSFPSPTGLEPSCKSCGA-HFANTARKQTCLDCKKNFCMTCSSQVGN-------GPRLCLLCQRFRATA 70 (120)
T ss_dssp --------------CCCTTTCC-CCSSGGGCEECTTTCCEECGGGEEC-----------CCEEHHHHHHHHTT
T ss_pred CCCcccCCcCccccCcccCcCC-ccccccccccCCCCCCeeCHHHhCCCCC-------CceECHHHHHHHhcc
Confidence 3556788999999999999999 9999999999999999999999998764 499999999987643
No 12
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=99.49 E-value=2.4e-14 Score=127.83 Aligned_cols=92 Identities=15% Similarity=0.385 Sum_probs=79.1
Q ss_pred CCcceEEEec--CCeEEEEEeCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCccccCCccCC-Ccccc
Q psy8222 2 ELRNGWLIQT--SSKSFAVHAATSTEKQEWMAHINKCIEDLLRKSGKKPAATHAAVWIPDNEAAVCMHCKRTQF-TVLSR 78 (198)
Q Consensus 2 ~~~n~f~i~t--~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~~g~~~~~~~~~~Wv~d~~~~~C~~C~~~~F-s~~~R 78 (198)
.++|+|.|.. +.++|.|+|.|++||+.|+++|+++|..+..... ....|...|.++...+.|+.|+. .| +++++
T Consensus 297 ~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~~~--~~~~h~f~~~~~~~~t~C~~C~~-~~~g~~~q 373 (406)
T 2vrw_B 297 KWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIYPENA--TANGHDFQMFSFEETTSCKACQM-LLRGTFYQ 373 (406)
T ss_dssp TTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHSCTTT--TGGGCCEEEECCSSCCBCTTTCC-BCCSSSSC
T ss_pred ccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhhhccc--cCCCCCCccccCCCCCCCccccc-hhceeCCC
Confidence 3679999985 5789999999999999999999999998643222 23457889999999999999999 88 58899
Q ss_pred ccccccCCceEeCCCCCC
Q psy8222 79 RHHCRKCGSVVCAPCSNK 96 (198)
Q Consensus 79 rhhCr~CG~vvC~~Cs~~ 96 (198)
+|||+.||.+||..|+..
T Consensus 374 g~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 374 GYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp EEEETTTCCEECGGGGGG
T ss_pred CCCCCCCcCccchhhhhh
Confidence 999999999999999864
No 13
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=99.16 E-value=2.4e-11 Score=113.53 Aligned_cols=92 Identities=15% Similarity=0.390 Sum_probs=77.0
Q ss_pred CCcceEEEecCC--eEEEEEeCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCccccCCccCC-Ccccc
Q psy8222 2 ELRNGWLIQTSS--KSFAVHAATSTEKQEWMAHINKCIEDLLRKSGKKPAATHAAVWIPDNEAAVCMHCKRTQF-TVLSR 78 (198)
Q Consensus 2 ~~~n~f~i~t~~--KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~~g~~~~~~~~~~Wv~d~~~~~C~~C~~~~F-s~~~R 78 (198)
.++|+|.|.+.. ++|.|+|.|.+||+.|+++|+.+|+.+..+. .....|.-.|.+....+.|+.|+. .| +++++
T Consensus 469 ~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~~~~--~~~~~H~F~~~~~~~~t~C~~C~~-~l~gl~~q 545 (587)
T 3ky9_A 469 KWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIYPEN--ATANGHDFQMFSFEETTSCKACQM-LLRGTFYQ 545 (587)
T ss_dssp TTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHSCTT--TTGGGCCEEEECCSSCCBCTTTCS-BCCSSSCC
T ss_pred cccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhcccc--ccccCCceeEEeCCCCcccccccc-cccccccC
Confidence 378999999876 8999999999999999999999998764322 223456778888899999999998 76 88899
Q ss_pred ccccccCCceEeCCCCCC
Q psy8222 79 RHHCRKCGSVVCAPCSNK 96 (198)
Q Consensus 79 rhhCr~CG~vvC~~Cs~~ 96 (198)
.|+|+.||.+||..|...
T Consensus 546 g~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 546 GYRCHRCRASAHKECLGR 563 (587)
T ss_dssp EEEETTTCCEECSGGGGG
T ss_pred CcCCCCCCCccchhhhhc
Confidence 999999999999999865
No 14
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.39 E-value=6.3e-07 Score=67.23 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=39.2
Q ss_pred CCcceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHHHHh
Q psy8222 2 ELRNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDLLRK 43 (198)
Q Consensus 2 ~~~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~ 43 (198)
.++|+|.|.+.++||.++|.+++||.+|+.+|++|++.++.+
T Consensus 71 ~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~~~~~ 112 (113)
T 1zc3_B 71 PMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRALSDK 112 (113)
T ss_dssp TBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHHhhc
Confidence 589999999999999999999999999999999999987654
No 15
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.91 E-value=1.6e-05 Score=58.17 Aligned_cols=40 Identities=10% Similarity=0.364 Sum_probs=37.3
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHHHHh
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDLLRK 43 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~ 43 (198)
+|.|.|.++.++|.|.|.|++|+++||.+|+.+|..+++.
T Consensus 67 ~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 106 (114)
T 2da0_A 67 KKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTM 106 (114)
T ss_dssp SSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999988754
No 16
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=97.84 E-value=1.7e-05 Score=62.42 Aligned_cols=37 Identities=8% Similarity=0.339 Sum_probs=34.3
Q ss_pred CcceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 3 ~~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
.++.|.|.++.++|+|.|.|++|+++||++|+++|..
T Consensus 86 ~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 86 NKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp SCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred cceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998874
No 17
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=97.83 E-value=2.8e-05 Score=55.23 Aligned_cols=37 Identities=16% Similarity=0.511 Sum_probs=34.7
Q ss_pred cceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 4 ~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
+|.|.|.++. ++|.|.|.|.+|+++|+.+|+.+|..+
T Consensus 70 ~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 70 ESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp GGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 5899999998 999999999999999999999999865
No 18
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=97.77 E-value=4e-05 Score=60.70 Aligned_cols=49 Identities=14% Similarity=0.350 Sum_probs=39.6
Q ss_pred ceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCccc
Q psy8222 5 NGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDLLRKSGKKPAATHAAVWI 57 (198)
Q Consensus 5 n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~~g~~~~~~~~~~Wv 57 (198)
|.|+|.++.++|+|.|.|++|+++||++|+.+|.. ........|+..|.
T Consensus 99 ~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~~----n~~~~~~~h~~~~~ 147 (169)
T 1btk_A 99 YPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRY----NSDLVQKYHPCFWI 147 (169)
T ss_dssp EEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTT----CSCCCSEECSSCEE
T ss_pred ccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHH----CcchhhccCCCcee
Confidence 89999999999999999999999999999988763 12223345666676
No 19
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.75 E-value=7.9e-05 Score=53.72 Aligned_cols=39 Identities=28% Similarity=0.475 Sum_probs=35.8
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDLLR 42 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~ 42 (198)
+|.|.|.++.+.|.|.|.+.+|+++||.+|+.++..+..
T Consensus 69 ~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 107 (115)
T 2dn6_A 69 KCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKL 107 (115)
T ss_dssp CSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhc
Confidence 579999999999999999999999999999999987543
No 20
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.70 E-value=7.3e-05 Score=54.99 Aligned_cols=43 Identities=16% Similarity=0.478 Sum_probs=37.9
Q ss_pred CcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHHHHHhcC
Q psy8222 3 LRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIEDLLRKSG 45 (198)
Q Consensus 3 ~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~~g 45 (198)
-++.|.|.++. +.|.|.|.+.+|+++||.+|+.++........
T Consensus 68 ~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~~ 111 (120)
T 2d9x_A 68 DSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTEAIG 111 (120)
T ss_dssp SSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhhhhc
Confidence 35899999997 99999999999999999999999988765544
No 21
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=97.64 E-value=5e-05 Score=55.99 Aligned_cols=38 Identities=18% Similarity=0.318 Sum_probs=35.4
Q ss_pred CcceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 3 ~~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
.+|.|.|.++.+.|.|.|.+.+|+++|+.+|+.+|..+
T Consensus 77 ~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 114 (126)
T 1fao_A 77 RVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQI 114 (126)
T ss_dssp SSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999864
No 22
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=97.63 E-value=0.0001 Score=55.58 Aligned_cols=38 Identities=29% Similarity=0.464 Sum_probs=34.6
Q ss_pred cceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIEDLL 41 (198)
Q Consensus 4 ~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll 41 (198)
+|.|.|.++. +.|.++|.+.+|+++||.+|+.+|..+.
T Consensus 89 ~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~~ 127 (129)
T 2p0d_A 89 RNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLV 127 (129)
T ss_dssp SSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 5899999886 6899999999999999999999998763
No 23
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=97.59 E-value=4e-05 Score=53.82 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=31.9
Q ss_pred CcceEEEecCCeEEEEEeCChHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSSKSFAVHAATSTEKQEWMAHINKC 36 (198)
Q Consensus 3 ~~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~ 36 (198)
-++.|.|.++.++|.|.|.|++|+++||++|+.|
T Consensus 59 ~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 59 DECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp CSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred cceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhh
Confidence 4689999999999999999999999999999876
No 24
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.59 E-value=0.00014 Score=53.55 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=36.8
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHHHHh
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDLLRK 43 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~ 43 (198)
++.|.|.++.+.|.|.|.+.+|+++||.+|+.++......
T Consensus 70 ~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 70 EGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp GCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999999999999887654
No 25
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=97.57 E-value=0.00012 Score=53.54 Aligned_cols=37 Identities=27% Similarity=0.441 Sum_probs=34.8
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
+|.|.|.++.+.|.|.|.+.+|+++||.+|+.+|...
T Consensus 77 ~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~ 113 (125)
T 1eaz_A 77 DNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ 113 (125)
T ss_dssp SSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999999753
No 26
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.56 E-value=0.00012 Score=53.99 Aligned_cols=37 Identities=16% Similarity=0.371 Sum_probs=34.0
Q ss_pred CcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 3 ~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
-+|.|.|.++. +.|.+.|.+++|+++||.+|+.++..
T Consensus 81 r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~ 118 (123)
T 1wjm_A 81 RKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIAS 118 (123)
T ss_dssp CSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 37899999887 99999999999999999999999875
No 27
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=97.52 E-value=5.7e-05 Score=55.50 Aligned_cols=38 Identities=16% Similarity=0.395 Sum_probs=33.2
Q ss_pred cceEEEec-CCeEEEEEeCChHHHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQT-SSKSFAVHAATSTEKQEWMAHINKCIEDLL 41 (198)
Q Consensus 4 ~n~f~i~t-~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll 41 (198)
+|.|.|.+ ..++|.+.|.+++|.++||.+|+.++....
T Consensus 66 ~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~~~ 104 (112)
T 3cxb_B 66 PHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSKGV 104 (112)
T ss_dssp TTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTCC-
T ss_pred CeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhccc
Confidence 69999995 478999999999999999999999887543
No 28
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.51 E-value=0.00017 Score=52.09 Aligned_cols=38 Identities=26% Similarity=0.350 Sum_probs=34.4
Q ss_pred CcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 3 ~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
-+|.|.|.++. +.|.|.|.|.+|+++||.+|+.++...
T Consensus 65 ~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~ 103 (113)
T 1pls_A 65 RMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCI 103 (113)
T ss_dssp SSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 36799999886 999999999999999999999998864
No 29
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.50 E-value=0.00014 Score=52.78 Aligned_cols=36 Identities=14% Similarity=0.484 Sum_probs=33.9
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
+|.|.|.++.+.|.|.|.+.+|+++||.+|+.++..
T Consensus 65 ~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~ 100 (115)
T 2cod_A 65 DNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKS 100 (115)
T ss_dssp TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999865
No 30
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.49 E-value=0.00011 Score=56.63 Aligned_cols=38 Identities=24% Similarity=0.407 Sum_probs=35.1
Q ss_pred CCcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 2 ELRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 2 ~~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
.++|+|.|.++. +++.|+|.|.+|++.||++|+.+|..
T Consensus 89 ~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~ 127 (132)
T 1v61_A 89 GSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKS 127 (132)
T ss_dssp SSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHTT
T ss_pred cCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 378999999998 99999999999999999999998764
No 31
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.45 E-value=0.00025 Score=53.93 Aligned_cols=38 Identities=21% Similarity=0.395 Sum_probs=34.5
Q ss_pred CcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 3 ~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
-+|.|.|.++. +.|.|.|.+.+|+++||.+|+.+|...
T Consensus 88 ~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~ 126 (150)
T 1wg7_A 88 RRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLN 126 (150)
T ss_dssp CTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 46899999996 999999999999999999999998753
No 32
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.42 E-value=0.00017 Score=56.28 Aligned_cols=35 Identities=11% Similarity=0.257 Sum_probs=32.8
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
.|.|.|.++.++|.+.|.|.+|+++||.+|+.++.
T Consensus 79 ~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 79 CAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp CCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999988776
No 33
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.42 E-value=8.5e-05 Score=53.72 Aligned_cols=35 Identities=17% Similarity=0.490 Sum_probs=32.3
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
++.|.|.++.+.|.|.|.+.+|+++||.+|+.+|.
T Consensus 77 ~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 77 KAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp TTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred CeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhc
Confidence 47999999999999999999999999999987764
No 34
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.42 E-value=0.00014 Score=52.39 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=32.2
Q ss_pred CcceEEEecC-CeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTS-SKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 3 ~~n~f~i~t~-~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
-+|.|.|.++ .++|.|.|.|.+|+++||.+|+.++.
T Consensus 65 ~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 65 HLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp BSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred CCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 4689999998 89999999999999999999987643
No 35
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=97.41 E-value=0.00025 Score=52.14 Aligned_cols=40 Identities=25% Similarity=0.493 Sum_probs=35.5
Q ss_pred cceEEEe----cCCeEEEEEeCChHHHHHHHHHHHHHHHHHHHh
Q psy8222 4 RNGWLIQ----TSSKSFAVHAATSTEKQEWMAHINKCIEDLLRK 43 (198)
Q Consensus 4 ~n~f~i~----t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~ 43 (198)
+|.|.|. ++.++|.|.|.|.+|+++||.+|+.++..+...
T Consensus 72 ~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 115 (125)
T 1unq_A 72 PNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQ 115 (125)
T ss_dssp TTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcccc
Confidence 6899999 567999999999999999999999999876543
No 36
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=97.39 E-value=0.00022 Score=51.38 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=31.5
Q ss_pred cceEEEecC-CeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTS-SKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 4 ~n~f~i~t~-~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
+|.|.|.++ .+.|.|.|.|++|+++||.+|+.++.
T Consensus 76 ~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 76 DCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp GGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 579999865 89999999999999999999998763
No 37
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.38 E-value=0.00021 Score=51.43 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=32.6
Q ss_pred cceEEEec--------CCeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQT--------SSKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 4 ~n~f~i~t--------~~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
+|.|.|.+ +.++|.|.|.+.+|+++||.+|+.++.
T Consensus 70 ~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 70 KFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp CCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 67999997 789999999999999999999999886
No 38
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.36 E-value=0.00024 Score=53.24 Aligned_cols=35 Identities=9% Similarity=0.147 Sum_probs=31.6
Q ss_pred cceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 4 ~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
+|.|.|.++. +.|.|+|.+++|+++||++|+.++.
T Consensus 79 ~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 79 DGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp TTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 5789999854 9999999999999999999998875
No 39
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=97.35 E-value=0.00029 Score=50.21 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=31.8
Q ss_pred CcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCI 37 (198)
Q Consensus 3 ~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i 37 (198)
-+|.|.|.++. +.|.|.|.|.+|+++||.+|+.++
T Consensus 73 ~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 73 EENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 46899999987 669999999999999999999886
No 40
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=97.34 E-value=0.00021 Score=50.72 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=30.2
Q ss_pred cceEEEecCC-eEEEEEeCChHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKC 36 (198)
Q Consensus 4 ~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~ 36 (198)
+|.|.|.++. +.|.|.|.|.+|+++||.+|+.|
T Consensus 73 ~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 73 KHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp SSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred ccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 7899999776 99999999999999999999864
No 41
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=97.33 E-value=0.00015 Score=51.53 Aligned_cols=36 Identities=14% Similarity=0.348 Sum_probs=32.7
Q ss_pred cceEEEecC-CeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTS-SKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 4 ~n~f~i~t~-~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
++.|.|.++ .+.|.|.|.|.+|+++||.+|+.++..
T Consensus 58 ~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 58 NTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp SSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred CceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 678999987 799999999999999999999987654
No 42
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.29 E-value=0.00023 Score=53.77 Aligned_cols=35 Identities=14% Similarity=0.402 Sum_probs=32.2
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
++.|.|.++.++|.|.|.|++|+++||++|+.++.
T Consensus 86 ~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 86 PFCFVINALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp SSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred CEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999998754
No 43
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=97.25 E-value=0.00047 Score=50.30 Aligned_cols=27 Identities=30% Similarity=0.586 Sum_probs=24.8
Q ss_pred CeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 13 SKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 13 ~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
.+.|.|.|.|++|+++||.+|+.+|..
T Consensus 95 ~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 95 HVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 378999999999999999999999875
No 44
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=97.25 E-value=0.00036 Score=51.23 Aligned_cols=36 Identities=11% Similarity=0.239 Sum_probs=32.2
Q ss_pred CcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 3 ~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
-+|.|.|.++. +.|.|.|.+++|+++||.+|+.++.
T Consensus 83 ~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 83 RKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp SCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 35789999986 9999999999999999999988754
No 45
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=97.22 E-value=0.00032 Score=54.48 Aligned_cols=36 Identities=17% Similarity=0.280 Sum_probs=33.1
Q ss_pred CcceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 3 ~~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
-+|.|.|.++.+.|.|.|.+++|+++||.+|+.++.
T Consensus 76 ~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 76 RKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp CSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 368999999999999999999999999999998763
No 46
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=97.19 E-value=0.00046 Score=50.90 Aligned_cols=36 Identities=14% Similarity=0.332 Sum_probs=32.5
Q ss_pred cceEEEec-CCeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQT-SSKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 4 ~n~f~i~t-~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
+|.|.|.+ +.+.|.++|.+++|.++||.+|+.+|..
T Consensus 84 ~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 84 KHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp TTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 68999996 5699999999999999999999998763
No 47
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=97.19 E-value=0.00028 Score=53.65 Aligned_cols=38 Identities=18% Similarity=0.393 Sum_probs=33.2
Q ss_pred cceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIEDLL 41 (198)
Q Consensus 4 ~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll 41 (198)
+|.|.|.++. ++|.|.|.+.+|+++||.+|+.+|..+.
T Consensus 84 ~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 122 (148)
T 1u5f_A 84 DCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLG 122 (148)
T ss_dssp GGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC---
T ss_pred ccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhc
Confidence 5899999987 9999999999999999999999987653
No 48
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.17 E-value=0.00023 Score=52.41 Aligned_cols=36 Identities=22% Similarity=0.437 Sum_probs=32.5
Q ss_pred CcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 3 ~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
-+|.|.|.++. +.|.|.|.+.+|+++||.+|+.++.
T Consensus 88 ~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 88 QGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp CSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred CCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 36899999997 6799999999999999999998875
No 49
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=97.17 E-value=0.00049 Score=50.12 Aligned_cols=37 Identities=11% Similarity=0.329 Sum_probs=33.1
Q ss_pred CcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 3 ~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
.++.|.|.++. ++|.|.|.|.+|+++||.+|+.++..
T Consensus 73 ~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 73 RRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp SSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred CcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 46889999887 99999999999999999999998864
No 50
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.13 E-value=0.00063 Score=51.99 Aligned_cols=35 Identities=6% Similarity=0.175 Sum_probs=32.4
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
++.|.|.++.++|.|.|.|++|+++||++|..|+-
T Consensus 76 k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 76 RAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp SSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999998874
No 51
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.12 E-value=0.00046 Score=49.75 Aligned_cols=36 Identities=8% Similarity=0.371 Sum_probs=31.4
Q ss_pred CcceEEEec-CCeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQT-SSKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 3 ~~n~f~i~t-~~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
.+|.|.|.+ ..+.|.|.|.+++|+++||.+|+.++.
T Consensus 73 ~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 73 RKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp CSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 367999975 469999999999999999999998764
No 52
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.11 E-value=0.00095 Score=51.90 Aligned_cols=40 Identities=13% Similarity=0.273 Sum_probs=35.6
Q ss_pred CCcceEEEecCC------eEEEEEeCChHHHHHHHHHHHHHHHHHH
Q psy8222 2 ELRNGWLIQTSS------KSFAVHAATSTEKQEWMAHINKCIEDLL 41 (198)
Q Consensus 2 ~~~n~f~i~t~~------KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll 41 (198)
.|+|+|.|.++. .++.|.|.|.+||+.|++.|+.+|.+..
T Consensus 80 ~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 80 YYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp SCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 489999999753 7899999999999999999999998653
No 53
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.11 E-value=0.00066 Score=48.66 Aligned_cols=35 Identities=9% Similarity=0.215 Sum_probs=31.1
Q ss_pred cceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 4 ~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
+|.|.|.++. +.|.|.|.+++|++.||.+|+.++.
T Consensus 68 ~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 68 SKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp SSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred CcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 5899999775 6799999999999999999998753
No 54
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.10 E-value=0.00075 Score=50.08 Aligned_cols=35 Identities=17% Similarity=0.464 Sum_probs=32.6
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
+|.|+|..++++|.+.|.|+++.+.||.+|+.|+.
T Consensus 72 ~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 72 GHVWKLQWAKQSWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp SEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 68999999999999999999999999999998754
No 55
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=97.10 E-value=0.00048 Score=50.76 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=33.2
Q ss_pred CcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 3 ~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
-+|.|.|.++. +.|.|.|.+.+|+++||.+|+.++..
T Consensus 84 ~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 84 EENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp SCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 46899999985 67999999999999999999998864
No 56
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=97.05 E-value=0.00066 Score=50.58 Aligned_cols=37 Identities=11% Similarity=0.217 Sum_probs=31.4
Q ss_pred cceEEEecCC---eEEEEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSS---KSFAVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 4 ~n~f~i~t~~---KSf~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
+|.|.|.+++ +.|.|.|.|.+|+++||.+|+.++...
T Consensus 82 ~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 82 SFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp SEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred CEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 5799998764 689999999999999999999987653
No 57
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=96.86 E-value=0.0013 Score=54.14 Aligned_cols=36 Identities=17% Similarity=0.419 Sum_probs=34.1
Q ss_pred cceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 4 ~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
+|.|.|.++.+.|.|.|.|.+|+++||.+|+.++..
T Consensus 121 ~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 121 ENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp TSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999999973
No 58
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=96.84 E-value=0.0013 Score=49.17 Aligned_cols=37 Identities=27% Similarity=0.433 Sum_probs=31.9
Q ss_pred CCcceEEEec------CCeEEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 2 ELRNGWLIQT------SSKSFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 2 ~~~n~f~i~t------~~KSf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
.+++.|+|.. +.++|+|.|.|.+|++.|+.+|..+|.
T Consensus 73 ~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 73 EIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp TGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred cCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 3678899985 359999999999999999999988764
No 59
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=96.69 E-value=0.0028 Score=53.56 Aligned_cols=38 Identities=13% Similarity=0.407 Sum_probs=34.9
Q ss_pred cceEEEec-CCeEEEEEeCChHHHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQT-SSKSFAVHAATSTEKQEWMAHINKCIEDLL 41 (198)
Q Consensus 4 ~n~f~i~t-~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll 41 (198)
+|.|.|.+ ..+.|.+.|.|++|+++||.+|+.++..+.
T Consensus 89 ~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~ 127 (263)
T 3a8p_A 89 EHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLF 127 (263)
T ss_dssp SSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 68999999 679999999999999999999999998754
No 60
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=96.66 E-value=0.0015 Score=55.28 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=33.3
Q ss_pred CcceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 3 ~~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
.+|.|.|.++.++|.|.|.|++|+++||.+|+.++...
T Consensus 77 ~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 77 NKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp CSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred CCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999988764
No 61
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=96.57 E-value=0.008 Score=46.20 Aligned_cols=54 Identities=24% Similarity=0.645 Sum_probs=43.8
Q ss_pred CCCccccCCccCCCcc-ccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 61 EAAVCMHCKRTQFTVL-SRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~-~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
....|.+|.+ +|+++ ++.+.|..|..-||..|.... +....+..=+|..|...-
T Consensus 54 ~~~~C~~C~~-~~g~l~~~g~~C~~C~~~VC~~C~~~~---~~~~~~~~W~C~vC~k~r 108 (134)
T 1zbd_B 54 GVNRCILCGE-QLGMLGSASVVCEDCKKNVCTKCGVET---SNNRPHPVWLCKICLEQR 108 (134)
T ss_dssp SSSBCSSSCC-BCSTTSCCEEECTTTCCEEETTSEEEC---CCSSSSCCEEEHHHHHHH
T ss_pred CCccccccCC-CcccccCCCCCCCCCCcccccccCCcc---CCCCCccceechhhHHHH
Confidence 5688999999 99855 789999999999999997542 222347889999999753
No 62
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.51 E-value=0.0025 Score=48.19 Aligned_cols=24 Identities=13% Similarity=0.457 Sum_probs=22.0
Q ss_pred EEEEEeCChHHHHHHHHHHHHHHH
Q psy8222 15 SFAVHAATSTEKQEWMAHINKCIE 38 (198)
Q Consensus 15 Sf~v~A~s~~Ek~~Wi~~i~~~i~ 38 (198)
.|.|.|.|++|+++||++|+.++.
T Consensus 101 ~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 101 YLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp CCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHHHHh
Confidence 388999999999999999998875
No 63
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=96.50 E-value=0.0036 Score=55.44 Aligned_cols=40 Identities=13% Similarity=0.266 Sum_probs=35.6
Q ss_pred CcceEEEecC--CeEEEEEeCChHHHHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTS--SKSFAVHAATSTEKQEWMAHINKCIEDLLR 42 (198)
Q Consensus 3 ~~n~f~i~t~--~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~ 42 (198)
++|+|.|.+. .++|.|+|.|++||+.|+++|+.++..+..
T Consensus 326 ~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~ 367 (402)
T 2dfk_A 326 MKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQE 367 (402)
T ss_dssp ESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 5799999865 579999999999999999999999988654
No 64
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=96.43 E-value=0.0046 Score=55.56 Aligned_cols=41 Identities=15% Similarity=0.348 Sum_probs=36.3
Q ss_pred CCcceEEEecC--CeEEEEEeCChHHHHHHHHHHHHHHHHHHH
Q psy8222 2 ELRNGWLIQTS--SKSFAVHAATSTEKQEWMAHINKCIEDLLR 42 (198)
Q Consensus 2 ~~~n~f~i~t~--~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~ 42 (198)
.++|+|.|... .++|.|+|.|++||+.|+++|+.++..+..
T Consensus 402 ~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~ 444 (466)
T 2pz1_A 402 SIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQL 444 (466)
T ss_dssp CBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 36799999976 579999999999999999999999998654
No 65
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=96.38 E-value=0.0049 Score=46.88 Aligned_cols=37 Identities=5% Similarity=0.255 Sum_probs=33.3
Q ss_pred CcceEEEecC--CeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTS--SKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 3 ~~n~f~i~t~--~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
-+|.|+|.++ ...|.+.|.+.++.+.|+.+|..++..
T Consensus 75 ~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~ 113 (126)
T 2dtc_A 75 HPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKS 113 (126)
T ss_dssp STTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhc
Confidence 3699999976 689999999999999999999998873
No 66
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=96.29 E-value=0.0064 Score=52.84 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=34.6
Q ss_pred CcceEEEec--CCeEEEEEeCChHHHHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQT--SSKSFAVHAATSTEKQEWMAHINKCIEDLLR 42 (198)
Q Consensus 3 ~~n~f~i~t--~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~ 42 (198)
-+|+|.|.. +.++|.|+|.|+++|+.|+++|+.+|.....
T Consensus 288 ~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 329 (353)
T 1kz7_A 288 DTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQLQ 329 (353)
T ss_dssp BTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 368899974 5789999999999999999999999987544
No 67
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=96.21 E-value=0.0062 Score=45.52 Aligned_cols=35 Identities=6% Similarity=0.269 Sum_probs=30.0
Q ss_pred CcceEEEecCC-------eEEEEEeCChHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSS-------KSFAVHAATSTEKQEWMAHINKCI 37 (198)
Q Consensus 3 ~~n~f~i~t~~-------KSf~v~A~s~~Ek~~Wi~~i~~~i 37 (198)
-.+.|.|.+++ +.|.+.|.|.+|+++||++|+.++
T Consensus 76 ~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 76 SDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp -CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 35689998776 499999999999999999999875
No 68
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.13 E-value=0.0071 Score=46.19 Aligned_cols=34 Identities=15% Similarity=0.411 Sum_probs=29.7
Q ss_pred CCcceEEEecCCeEEEEEeCChHHHHHHHHHHHHH
Q psy8222 2 ELRNGWLIQTSSKSFAVHAATSTEKQEWMAHINKC 36 (198)
Q Consensus 2 ~~~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~ 36 (198)
...++|.|.|++|+|.|.|.+. |+.+||.+|.+.
T Consensus 86 k~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 86 RDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLL 119 (127)
T ss_dssp SSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHH
T ss_pred CcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHH
Confidence 3458999999999999999964 999999999754
No 69
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=95.99 E-value=0.01 Score=51.57 Aligned_cols=38 Identities=16% Similarity=0.386 Sum_probs=33.1
Q ss_pred CcceEEEec-----CCeEEEEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQT-----SSKSFAVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 3 ~~n~f~i~t-----~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
.+|.|.|.. ..++|.|+|.|.++|+.|+++|.++|...
T Consensus 278 ~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 278 DPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQ 320 (354)
T ss_dssp CTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 368899975 35899999999999999999999999864
No 70
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=95.94 E-value=0.0012 Score=59.44 Aligned_cols=41 Identities=12% Similarity=0.315 Sum_probs=0.0
Q ss_pred CCcceEEEecCCeEEEEEeCChHHHHHHHHHHHHHHHHHHH
Q psy8222 2 ELRNGWLIQTSSKSFAVHAATSTEKQEWMAHINKCIEDLLR 42 (198)
Q Consensus 2 ~~~n~f~i~t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~ 42 (198)
..+|.|.|.++.++|.|.|.|.+||++|+++|++++...+.
T Consensus 326 ~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 366 (510)
T 3jzy_A 326 SDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYID 366 (510)
T ss_dssp -----------------------------------------
T ss_pred ccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999987654
No 71
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=95.80 E-value=0.0083 Score=45.70 Aligned_cols=33 Identities=12% Similarity=0.329 Sum_probs=28.6
Q ss_pred cceEEEecCC--------eEEEEEeCChHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSS--------KSFAVHAATSTEKQEWMAHINKC 36 (198)
Q Consensus 4 ~n~f~i~t~~--------KSf~v~A~s~~Ek~~Wi~~i~~~ 36 (198)
+|.|.|.++. ++|.|.|.|.+|+++|++.|.+|
T Consensus 75 k~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 75 KHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp CEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred ceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 5889999765 49999999999999999999553
No 72
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=95.48 E-value=0.0046 Score=48.61 Aligned_cols=51 Identities=25% Similarity=0.671 Sum_probs=42.5
Q ss_pred CCCccccCCccCCCcc-ccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 61 EAAVCMHCKRTQFTVL-SRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~-~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
....|.+|.+ +|+++ ++.+-|..|..-||..|... ++ ....=+|..|+..-
T Consensus 67 ~~~~C~~C~~-~fg~l~~~g~~C~~C~~~VC~~C~~~---~~---~~~~W~C~vC~k~r 118 (153)
T 2zet_C 67 NETHCARCLQ-PYRLLLNSRRQCLECSLFVCKSCSHA---HP---EEQGWLCDPCHLAR 118 (153)
T ss_dssp GGTBCTTTCC-BGGGCSSCCEECTTTCCEECGGGEEC---CS---SSSSCEEHHHHHHH
T ss_pred CCccchhhcC-ccccccCCCCcCCCCCchhhcccccc---cC---CCCcEeeHHHHHHH
Confidence 3678999999 99987 79999999999999999832 22 36789999999763
No 73
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=94.91 E-value=0.033 Score=49.44 Aligned_cols=40 Identities=13% Similarity=0.277 Sum_probs=34.6
Q ss_pred CcceEEEe----cCCeEEEEEeCChHHHHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQ----TSSKSFAVHAATSTEKQEWMAHINKCIEDLLR 42 (198)
Q Consensus 3 ~~n~f~i~----t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~ 42 (198)
-+|.|.|. ++.+.|.|+|.+.+|+.+|+++|+.+....++
T Consensus 207 ~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~~~lq 250 (386)
T 3lju_X 207 HPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQ 250 (386)
T ss_dssp STTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhccccccc
Confidence 36789988 88999999999999999999999988665444
No 74
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=94.74 E-value=0.043 Score=39.05 Aligned_cols=32 Identities=25% Similarity=0.673 Sum_probs=26.0
Q ss_pred CCCCCccccCCccCCCccccccccccCCceEeCCC
Q psy8222 59 DNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPC 93 (198)
Q Consensus 59 d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~C 93 (198)
......|..|++ ...|+ -..+|| ||.+||..+
T Consensus 22 k~~~~rC~~C~k-kvgl~-~~f~Cr-Cg~~FC~~H 53 (85)
T 1wff_A 22 KKIMKHCFLCGK-KTGLA-TSFECR-CGNNFCASH 53 (85)
T ss_dssp CCCCCBCSSSCC-BCSSS-SCEECT-TCCEECTTT
T ss_pred cccCccchhhCC-eeccc-CCeEcC-CCCEecccC
Confidence 345689999999 88876 358998 999998865
No 75
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=94.52 E-value=0.026 Score=38.09 Aligned_cols=30 Identities=23% Similarity=0.783 Sum_probs=24.7
Q ss_pred CCCCccccCCccCCCccccccccccCCceEeCCC
Q psy8222 60 NEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPC 93 (198)
Q Consensus 60 ~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~C 93 (198)
.....|..|++ ...|+ ...|| ||.+||..+
T Consensus 13 ~~~~rC~~C~k-kvgl~--~f~Cr-Cg~~FC~~H 42 (64)
T 1wfh_A 13 QRPNRCTVCRK-RVGLT--GFMCR-CGTTFCGSH 42 (64)
T ss_dssp SSCCCCTTTCC-CCCTT--CEECS-SSCEECTTT
T ss_pred CcCCcChhhCC-ccCcc--CEEee-cCCEecccc
Confidence 34578999999 88877 68995 999999865
No 76
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=93.88 E-value=0.059 Score=37.33 Aligned_cols=29 Identities=24% Similarity=0.839 Sum_probs=24.3
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCC
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPC 93 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~C 93 (198)
....|..|++ ...++ ...|| ||.+||..+
T Consensus 24 ~~nRC~~CrK-kvgL~--gf~Cr-Cg~~FCs~H 52 (74)
T 1wfl_A 24 KKNRCFMCRK-KVGLT--GFDCR-CGNLFCGLH 52 (74)
T ss_dssp CTTBCSSSCC-BCGGG--CEECT-TSCEECSSS
T ss_pred cCCcChhhCC-ccccc--CeecC-CCCEechhc
Confidence 4578999999 87776 48999 999998865
No 77
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=93.43 E-value=0.06 Score=36.32 Aligned_cols=29 Identities=31% Similarity=0.887 Sum_probs=24.2
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCC
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPC 93 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~C 93 (198)
....|..|++ ...|+ ...| .||.+||..+
T Consensus 14 ~~~rC~~C~k-kvgl~--~f~C-rCg~~FC~~H 42 (64)
T 1wg2_A 14 PNNRCFSCNK-KVGVM--GFKC-KCGSTFCGSH 42 (64)
T ss_dssp CSCSCTTTCC-CCTTS--CEEC-TTSCEECSSS
T ss_pred cCCcChhhCC-ccccc--CeEe-ecCCEecccC
Confidence 4578999999 87776 6899 6999999865
No 78
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=92.96 E-value=0.086 Score=36.51 Aligned_cols=31 Identities=29% Similarity=0.848 Sum_probs=25.5
Q ss_pred CCCCCccccCCccCCCccccccccccCCceEeCCC
Q psy8222 59 DNEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPC 93 (198)
Q Consensus 59 d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~C 93 (198)
......|..|++ ...++ ...| .||.+||..+
T Consensus 22 k~~~~RC~~C~k-kvgL~--~f~C-rCg~~FCs~H 52 (74)
T 1wfp_A 22 KSTATRCLSCNK-KVGVT--GFKC-RCGSTFCGTH 52 (74)
T ss_dssp TCCCCBCSSSCC-BCTTT--CEEC-TTSCEECTTT
T ss_pred cccCccchhhcC-ccccc--ceEe-ccCCEecccc
Confidence 346789999999 88877 6899 5999998865
No 79
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=92.89 E-value=0.1 Score=51.84 Aligned_cols=38 Identities=24% Similarity=0.344 Sum_probs=33.0
Q ss_pred CCcceEEEecCC-eEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 2 ELRNGWLIQTSS-KSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 2 ~~~n~f~i~t~~-KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
.++|+|.|.+.. .+|.|+|.|.+||+.|+++|+.+..+
T Consensus 509 ~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k 547 (1049)
T 3ksy_A 509 EYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYR 547 (1049)
T ss_dssp SCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 367999999876 59999999999999999999876653
No 80
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=92.75 E-value=0.064 Score=45.90 Aligned_cols=36 Identities=17% Similarity=0.377 Sum_probs=31.6
Q ss_pred cceEEEecC-CeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTS-SKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 4 ~n~f~i~t~-~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
+|.|.|.++ .+.|.+.|.+.+|.+.|+.+|+.++..
T Consensus 89 k~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~ 125 (279)
T 3a8n_A 89 DFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAA 125 (279)
T ss_dssp CSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 689999865 578999999999999999999988864
No 81
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=91.71 E-value=0.15 Score=33.79 Aligned_cols=54 Identities=31% Similarity=0.692 Sum_probs=41.4
Q ss_pred CCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHh
Q psy8222 60 NEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDV 117 (198)
Q Consensus 60 ~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~ 117 (198)
++...|.+|.+|+|.= .--|.|..|-.-||+.|..+ ..|. +.+-.=||..|.+.
T Consensus 7 ~d~~~C~iC~KTKFAD-G~Gh~C~yCk~r~CaRCGg~-v~lr--~~k~~WvC~lC~k~ 60 (62)
T 2a20_A 7 GDAPTCGICHKTKFAD-GCGHNCSYCQTKFCARCGGR-VSLR--SNKVMWVCNLCRKQ 60 (62)
T ss_dssp SCCCCCSSSSCSCCCS-SCCEEBTTTCCEECTTSEEE-EESS--TTCEEEEEHHHHHH
T ss_pred CCcchhhhhccceecc-CCCccccccCCeeecccCCE-eeec--CCeEEEEehhhhhc
Confidence 4677899999988842 23489999999999999765 3443 45788899999753
No 82
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.10 E-value=0.12 Score=35.08 Aligned_cols=32 Identities=22% Similarity=0.738 Sum_probs=25.2
Q ss_pred CCCCccccCCccCCCcccc-ccccccCCceEeCCC
Q psy8222 60 NEAAVCMHCKRTQFTVLSR-RHHCRKCGSVVCAPC 93 (198)
Q Consensus 60 ~~~~~C~~C~~~~Fs~~~R-rhhCr~CG~vvC~~C 93 (198)
.....|..|++ ...|... -..| .||.+||..+
T Consensus 13 ~~~~rC~~C~k-k~gL~~~egf~C-rCg~~FC~~H 45 (67)
T 1x4w_A 13 KSRRRCFQCQT-KLELVQQELGSC-RCGYVFCMLH 45 (67)
T ss_dssp SCTTBCSSSCC-BCCHHHHHHHCC-SSSCCCCTTT
T ss_pred ccCCcchhhCC-eecccccCceEe-cCCCEehhcc
Confidence 35678999999 8776643 4789 7999998865
No 83
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.96 E-value=0.59 Score=35.93 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=26.7
Q ss_pred cceEEEecCC----eEEEEEeCChHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSS----KSFAVHAATSTEKQEWMAHINKC 36 (198)
Q Consensus 4 ~n~f~i~t~~----KSf~v~A~s~~Ek~~Wi~~i~~~ 36 (198)
+.+|.|..|. +.+.|.|.|+++.++||++++.|
T Consensus 74 kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlA 110 (137)
T 2ys3_A 74 KFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLA 110 (137)
T ss_dssp BEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred ceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHh
Confidence 4455566654 88999999999999999998754
No 84
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.20 E-value=0.25 Score=34.38 Aligned_cols=50 Identities=22% Similarity=0.602 Sum_probs=40.1
Q ss_pred CCCccccCCccCCCcc-ccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 61 EAAVCMHCKRTQFTVL-SRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~-~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
....|..|+. +|++| +|--.|+.|-+-||.+|--. .. .+.=.|..|++..
T Consensus 24 ~~r~CarC~~-~LG~l~~~g~~C~~Ck~rVC~~Crv~---~~----~~~W~C~VC~k~~ 74 (76)
T 2csz_A 24 SDRTCARCQE-SLGRLSPKTNTCRGCNHLVCRDCRIQ---ES----NGTWRCKVCSGPS 74 (76)
T ss_dssp CCCBCSSSCC-BCSSSCTTTSEETTTTEECCTTSEEE---CS----TTCEEEHHHHSSC
T ss_pred CccchhhhCc-cccccccCCCcCcccChhhccccccc---CC----CCCEEEeeCchhh
Confidence 4678999999 99976 58999999999999999533 11 2678899988653
No 85
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=85.02 E-value=0.57 Score=28.85 Aligned_cols=37 Identities=16% Similarity=0.399 Sum_probs=26.8
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCee
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRF 98 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~ 98 (198)
....|.+|.. .|.--........||++||..|...++
T Consensus 4 ~~~~C~IC~~-~~~~~~~~~~~~~CgH~fc~~Ci~~~~ 40 (55)
T 2ecm_A 4 GSSGCPICLE-DIHTSRVVAHVLPCGHLLHRTCYEEML 40 (55)
T ss_dssp CCCSCTTTCC-CCCTTTSCEEECTTSCEEETTHHHHHH
T ss_pred CCCcCcccCh-hhcCCCcCeEecCCCCcccHHHHHHHH
Confidence 4567999998 775433344556799999999987654
No 86
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=84.81 E-value=0.21 Score=33.28 Aligned_cols=54 Identities=22% Similarity=0.336 Sum_probs=35.1
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
+...|.+|.. .|.--. . -.||++||..|.................|..|-..+.
T Consensus 11 ~~~~C~IC~~-~~~~p~---~-l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 11 EEVTCPICLE-LLTEPL---S-LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCEETTTTE-ECSSCC---C-CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred cCCCCcCCCc-ccCCee---E-CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 4567999998 664321 1 2699999999988765432222234667888866554
No 87
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.53 E-value=0.23 Score=31.55 Aligned_cols=33 Identities=30% Similarity=0.583 Sum_probs=26.9
Q ss_pred ccccCCCCCccccCCccCCCccc--cccccccCCceE
Q psy8222 55 VWIPDNEAAVCMHCKRTQFTVLS--RRHHCRKCGSVV 89 (198)
Q Consensus 55 ~Wv~d~~~~~C~~C~~~~Fs~~~--RrhhCr~CG~vv 89 (198)
.|.. .....|..|++ .|+++. |+|-|..||..|
T Consensus 6 ~~~~-~~~~~CPrCn~-~f~~~~sLr~HmkycCp~~v 40 (49)
T 2e72_A 6 SGQD-GGRKICPRCNA-QFRVTEALRGHMCYCCPEMV 40 (49)
T ss_dssp SSCC-SSCCCCTTTCC-CCSSHHHHHHHHHHHCTTTC
T ss_pred cccc-CCceeCCcccc-cccchHHHHhhhhhcCcchh
Confidence 4543 36789999999 999874 889999999875
No 88
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=81.59 E-value=0.96 Score=27.80 Aligned_cols=47 Identities=17% Similarity=0.388 Sum_probs=30.0
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchH
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCY 115 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~ 115 (198)
+...|.+|.. .|..-..-.....||++||..|...++. ....|..|-
T Consensus 4 ~~~~C~IC~~-~~~~~~~~~~~~~C~H~f~~~Ci~~w~~-------~~~~CP~Cr 50 (55)
T 1iym_A 4 DGVECAVCLA-ELEDGEEARFLPRCGHGFHAECVDMWLG-------SHSTCPLCR 50 (55)
T ss_dssp CSCCCTTTCC-CCCTTSCCEECSSSCCEECTTHHHHTTT-------TCCSCSSSC
T ss_pred CCCcCccCCc-cccCCCceEECCCCCCcccHHHHHHHHH-------cCCcCcCCC
Confidence 4567999998 7754322222336999999999765531 134566664
No 89
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=80.40 E-value=0.77 Score=32.22 Aligned_cols=58 Identities=17% Similarity=0.443 Sum_probs=37.0
Q ss_pred CccccCCccCCCccccccccccCCce-----EeCCCCCCeeecCCCCCCCeeeccchHHhhcccc
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSV-----VCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSRDK 122 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~v-----vC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~~~ 122 (198)
..|..|+. ....-.+.+||..|+.- ||..|-..-..++.=| .....|..|...+++.+
T Consensus 3 ~~CP~C~~-~l~~~~~~~~C~~C~~~~~~~afCPeCgq~Le~lkACG-A~~yFC~~C~~LiSkkr 65 (81)
T 2jrp_A 3 ITCPVCHH-ALERNGDTAHCETCAKDFSLQALCPDCRQPLQVLKACG-AVDYFCQNGHGLISKKR 65 (81)
T ss_dssp CCCSSSCS-CCEECSSEEECTTTCCEEEEEEECSSSCSCCCEEEETT-EEEECCTTTTCCCCTTS
T ss_pred CCCCCCCC-ccccCCCceECccccccCCCcccCcchhhHHHHHHhcC-CcCeeeccCCCEeecce
Confidence 46888887 66655667788888864 6777765543333322 23667777777666543
No 90
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=79.82 E-value=0.22 Score=32.98 Aligned_cols=31 Identities=23% Similarity=0.659 Sum_probs=24.4
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCC
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCS 94 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs 94 (198)
...|..|.+ +|.-.. ++.|..|+.+||-.|=
T Consensus 15 ~~~C~~C~~-~~~~~~-~y~C~~C~~~FC~dCD 45 (59)
T 1z60_A 15 ERFCYGCQG-ELKDQH-VYVCAVCQNVFCVDCD 45 (59)
T ss_dssp CCEETTTTE-ECTTSE-EECCTTTTCCBCHHHH
T ss_pred CCcccccCc-ccCCCc-cEECCccCcCcccchh
Confidence 346999999 885322 4789999999999883
No 91
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.43 E-value=0.25 Score=32.43 Aligned_cols=50 Identities=18% Similarity=0.355 Sum_probs=32.4
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
+...|.+|.. .|.--.. -.||++||..|...+... ......|..|-..+.
T Consensus 19 ~~~~C~IC~~-~~~~~~~----~~CgH~fC~~Ci~~~~~~----~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 19 EEVICPICLD-ILQKPVT----IDCGHNFCLKCITQIGET----SCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCBCTTTCS-BCSSEEE----CTTCCEEEHHHHHHHCSS----SCSCCCCSSSCCCCC
T ss_pred cCCEeccCCc-ccCCeEE----cCCCChhhHHHHHHHHHc----CCCCCCCCCCCCcCC
Confidence 4568999998 6653211 279999999998765431 123556777755443
No 92
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=79.11 E-value=2.9 Score=30.93 Aligned_cols=36 Identities=17% Similarity=0.344 Sum_probs=28.6
Q ss_pred ceEEEecCC--eEEEEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 5 NGWLIQTSS--KSFAVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 5 n~f~i~t~~--KSf~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
..|.|.-.. |++.|.|.+++|.+.|+..|+..+...
T Consensus 86 ~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 86 RCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp GEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred ceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 457776443 899999999999999999998877653
No 93
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=78.84 E-value=0.48 Score=33.53 Aligned_cols=48 Identities=19% Similarity=0.543 Sum_probs=33.5
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
.-.|.+|.. .|. ....|-.||++||..|...++... ...|..|-..+.
T Consensus 22 ~~~C~IC~~-~~~---~p~~~~~CgH~FC~~Ci~~~~~~~------~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 22 VFRCFICME-KLR---DARLCPHCSKLCCFSCIRRWLTEQ------RAQCPHCRAPLQ 69 (100)
T ss_dssp HTBCTTTCS-BCS---SEEECTTTCCEEEHHHHHHHHHHT------CSBCTTTCCBCC
T ss_pred CCCCccCCc-ccc---CccccCCCCChhhHHHHHHHHHHC------cCCCCCCCCcCC
Confidence 346999998 553 455668999999999987654322 157888866553
No 94
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=78.82 E-value=1 Score=29.81 Aligned_cols=51 Identities=16% Similarity=0.352 Sum_probs=33.5
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
....|.+|.. .|..-. ...--.||++||..|...++. ....|..|-..+..
T Consensus 14 ~~~~C~IC~~-~~~~~~-~~~~~~C~H~fc~~Ci~~~~~-------~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 14 SGLECPVCKE-DYALGE-SVRQLPCNHLFHDSCIVPWLE-------QHDSCPVCRKSLTG 64 (78)
T ss_dssp SSCCCTTTTS-CCCTTS-CEEECTTSCEEETTTTHHHHT-------TTCSCTTTCCCCCC
T ss_pred CCCCCeeCCc-cccCCC-CEEEeCCCCeecHHHHHHHHH-------cCCcCcCcCCccCC
Confidence 4568999998 775321 111125999999999877642 12578888766554
No 95
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=77.01 E-value=2.1 Score=26.82 Aligned_cols=43 Identities=16% Similarity=0.384 Sum_probs=28.8
Q ss_pred CCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHh
Q psy8222 60 NEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDV 117 (198)
Q Consensus 60 ~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~ 117 (198)
.+...|.+|.. .|.-- .--.||++||..|... ....|..|-..
T Consensus 4 ~~~~~C~IC~~-~~~~p----~~l~CgH~fC~~Ci~~----------~~~~CP~Cr~~ 46 (56)
T 1bor_A 4 FQFLRCQQCQA-EAKCP----KLLPCLHTLCSGCLEA----------SGMQCPICQAP 46 (56)
T ss_dssp CCCSSCSSSCS-SCBCC----SCSTTSCCSBTTTCSS----------SSSSCSSCCSS
T ss_pred ccCCCceEeCC-ccCCe----EEcCCCCcccHHHHcc----------CCCCCCcCCcE
Confidence 34567999998 66532 2346999999999765 23456666443
No 96
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=75.67 E-value=1.6 Score=38.06 Aligned_cols=37 Identities=24% Similarity=0.474 Sum_probs=29.7
Q ss_pred cceEEEecCCeEE----EEEeCChHHHHHHHHHHHHHHHHH
Q psy8222 4 RNGWLIQTSSKSF----AVHAATSTEKQEWMAHINKCIEDL 40 (198)
Q Consensus 4 ~n~f~i~t~~KSf----~v~A~s~~Ek~~Wi~~i~~~i~~l 40 (198)
+|.|.|.+++... .+.+.+++++++|+.+|+.+++.+
T Consensus 70 ~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 70 PNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp TTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred CceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 6899998665333 578999999999999999987654
No 97
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=75.38 E-value=0.97 Score=32.71 Aligned_cols=44 Identities=18% Similarity=0.489 Sum_probs=29.6
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
.-.|.+|.. .|. .-..-..||++||..|...... ..|..|-..+
T Consensus 22 ~~~C~IC~~-~~~---~pv~~~~CgH~fC~~Ci~~~~~---------~~CP~Cr~~~ 65 (117)
T 1jm7_B 22 LLRCSRCTN-ILR---EPVCLGGCEHIFCSNCVSDCIG---------TGCPVCYTPA 65 (117)
T ss_dssp TTSCSSSCS-CCS---SCBCCCSSSCCBCTTTGGGGTT---------TBCSSSCCBC
T ss_pred CCCCCCCCh-Hhh---CccEeCCCCCHHHHHHHHHHhc---------CCCcCCCCcC
Confidence 356999988 553 2222227999999999876532 5677776655
No 98
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.14 E-value=0.44 Score=31.04 Aligned_cols=47 Identities=19% Similarity=0.362 Sum_probs=34.3
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
+...|.+|.. .|.- .--.||++||..|...++. ....|..|-..+..
T Consensus 14 ~~~~C~IC~~-~~~~-----~~~~CgH~fc~~Ci~~~~~-------~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 14 DEEECCICMD-GRAD-----LILPCAHSFCQKCIDKWSD-------RHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCSSSCC-SCCS-----EEETTTEEECHHHHHHSSC-------CCSSCHHHHHCTTC
T ss_pred CCCCCeeCCc-CccC-----cccCCCCcccHHHHHHHHH-------CcCcCCCcCCcccC
Confidence 4568999998 7654 3356999999999866432 35679999776654
No 99
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.70 E-value=1.1 Score=30.23 Aligned_cols=54 Identities=24% Similarity=0.442 Sum_probs=35.5
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
+...|.+|.. .|.-..+.-.--.||++||..|...+.... .....|..|-..+.
T Consensus 14 ~~~~C~IC~~-~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~----~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 14 EVLECPICME-SFTEEQLRPKLLHCGHTICRQCLEKLLASS----INGVRCPFCSKITR 67 (88)
T ss_dssp SCCBCTTTCC-BCCTTSSCEEECSSSCEEEHHHHHHHHHHC----SSCBCCTTTCCCBC
T ss_pred CCCCCccCCc-cccccCCCeEECCCCChhhHHHHHHHHHcC----CCCcCCCCCCCccc
Confidence 4567999998 776533322233799999999987654321 23567888866543
No 100
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.13 E-value=6.7 Score=29.69 Aligned_cols=36 Identities=17% Similarity=0.205 Sum_probs=30.1
Q ss_pred CcceEEEecCCeEEEEEeCC---------------hHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSSKSFAVHAAT---------------STEKQEWMAHINKCIE 38 (198)
Q Consensus 3 ~~n~f~i~t~~KSf~v~A~s---------------~~Ek~~Wi~~i~~~i~ 38 (198)
.+|=|.|.|....|+|.+.. .+.-+.|..+|++|+.
T Consensus 73 ~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 73 NPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp CCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 35889999999999998743 6888999999988874
No 101
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=71.06 E-value=1.1 Score=32.25 Aligned_cols=47 Identities=21% Similarity=0.450 Sum_probs=31.3
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
.-.|.+|.. .|.--. --.||++||..|...+.. .....|..|-..+.
T Consensus 15 ~~~C~iC~~-~~~~p~----~~~CgH~fC~~Ci~~~~~------~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 15 ECQCGICME-ILVEPV----TLPCNHTLCKPCFQSTVE------KASLCCPFCRRRVS 61 (115)
T ss_dssp HHBCTTTCS-BCSSCE----ECTTSCEECHHHHCCCCC------TTTSBCTTTCCBCH
T ss_pred CCCCccCCc-ccCcee----EcCCCCHHhHHHHHHHHh------HCcCCCCCCCcccC
Confidence 356999998 554211 127999999999876542 12367888876554
No 102
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=70.94 E-value=0.5 Score=34.57 Aligned_cols=48 Identities=23% Similarity=0.497 Sum_probs=31.9
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
.-.|.+|.. .|.--. --.||++||..|...+.. .....|..|-..+..
T Consensus 52 ~~~C~IC~~-~~~~p~----~~~CgH~fC~~Ci~~~~~------~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 52 TFQCICCQE-LVFRPI----TTVCQHNVCKDCLDRSFR------AQVFSCPACRYDLGR 99 (124)
T ss_dssp HTBCTTTSS-BCSSEE----ECTTSCEEEHHHHHHHHH------TTCCBCTTTCCBCCT
T ss_pred CCCCCcCCh-HHcCcE----EeeCCCcccHHHHHHHHh------HCcCCCCCCCccCCC
Confidence 357999998 665211 127999999999866543 234578888665543
No 103
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.86 E-value=2 Score=28.45 Aligned_cols=54 Identities=20% Similarity=0.354 Sum_probs=33.6
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
+...|.+|.. .|.--. . -.||++||..|......... .......|..|-..+..
T Consensus 18 ~~~~C~IC~~-~~~~p~---~-~~CgH~fC~~Ci~~~~~~~~-~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 18 EEVTCPICLE-LLTQPL---S-LDCGHSFCQACLTANHKKSM-LDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCTTTCS-CCSSCB---C-CSSSCCBCTTHHHHHHHHHH-HTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCCCc-ccCCce---e-CCCCCHHHHHHHHHHHHHhh-cCCCCCcCCCCCCccCH
Confidence 4568999998 664321 1 26999999999876432210 01225678888665553
No 104
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.19 E-value=1.4 Score=27.91 Aligned_cols=33 Identities=21% Similarity=0.458 Sum_probs=23.6
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCee
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRF 98 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~ 98 (198)
+...|.+|.. .|.--. . -.||++||..|...+.
T Consensus 19 ~~~~C~IC~~-~~~~p~---~-~~CgH~fC~~Ci~~~~ 51 (63)
T 2ysj_A 19 EEVICPICLD-ILQKPV---T-IDCGHNFCLKCITQIG 51 (63)
T ss_dssp CCCBCTTTCS-BCSSCE---E-CTTSSEECHHHHHHHH
T ss_pred cCCCCCcCCc-hhCCeE---E-eCCCCcchHHHHHHHH
Confidence 4568999998 665221 1 2799999999976654
No 105
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=69.87 E-value=1.3 Score=31.67 Aligned_cols=38 Identities=24% Similarity=0.649 Sum_probs=22.8
Q ss_pred ccCCCCCccccCCccCCCcccc---ccccccCCceEeCCCCC
Q psy8222 57 IPDNEAAVCMHCKRTQFTVLSR---RHHCRKCGSVVCAPCSN 95 (198)
Q Consensus 57 v~d~~~~~C~~C~~~~Fs~~~R---rhhCr~CG~vvC~~Cs~ 95 (198)
+.......|.+|+. ...+..- -.-|..|+..||..|..
T Consensus 11 ~~~~~~qiCqiCGD-~VG~~~~Ge~FVAC~eC~FPvCrpCyE 51 (93)
T 1weo_A 11 LKNLDGQFCEICGD-QIGLTVEGDLFVACNECGFPACRPCYE 51 (93)
T ss_dssp CSCCSSCBCSSSCC-BCCBCSSSSBCCSCSSSCCCCCHHHHH
T ss_pred ccccCCCccccccC-ccccCCCCCEEEeeeccCChhhHHHHH
Confidence 44446689999998 6554421 24566666655555543
No 106
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=69.80 E-value=2 Score=28.34 Aligned_cols=47 Identities=26% Similarity=0.564 Sum_probs=30.4
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHH
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYD 116 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~ 116 (198)
+...|.+|.. .|.- ...-..||++||..|...++... ..+.|..|-.
T Consensus 14 ~~~~C~IC~~-~~~~---p~~~~~CgH~fC~~Ci~~~~~~~-----~~~~CP~Cr~ 60 (74)
T 2yur_A 14 DELLCLICKD-IMTD---AVVIPCCGNSYCDECIRTALLES-----DEHTCPTCHQ 60 (74)
T ss_dssp GGGSCSSSCC-CCTT---CEECSSSCCEECTTHHHHHHHHS-----SSSCCSSSCC
T ss_pred CCCCCcCCCh-HHhC---CeEcCCCCCHHHHHHHHHHHHhc-----CCCcCCCCCC
Confidence 3457999988 6542 22333499999999987654321 2356777755
No 107
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.69 E-value=1.7 Score=28.32 Aligned_cols=47 Identities=17% Similarity=0.354 Sum_probs=31.0
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
+...|.+|.. .|.-- .--.||++||..|...++. ....|..|-..+.
T Consensus 14 ~~~~C~IC~~-~~~~~----~~~~CgH~fC~~Ci~~~~~-------~~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 14 TVPECAICLQ-TCVHP----VSLPCKHVFCYLCVKGASW-------LGKRCALCRQEIP 60 (71)
T ss_dssp SCCBCSSSSS-BCSSE----EEETTTEEEEHHHHHHCTT-------CSSBCSSSCCBCC
T ss_pred CCCCCccCCc-ccCCC----EEccCCCHHHHHHHHHHHH-------CCCcCcCcCchhC
Confidence 4567999998 66322 1126999999999765432 1257888866554
No 108
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.27 E-value=3.5 Score=27.38 Aligned_cols=28 Identities=18% Similarity=0.727 Sum_probs=20.8
Q ss_pred CCCcccc--CCccCCCccccccccccCCceEeCC
Q psy8222 61 EAAVCMH--CKRTQFTVLSRRHHCRKCGSVVCAP 92 (198)
Q Consensus 61 ~~~~C~~--C~~~~Fs~~~RrhhCr~CG~vvC~~ 92 (198)
....|.. |.+ . .++ ...|+.||.+||..
T Consensus 11 ~~~~Cs~~~Ck~-~-~ll--~f~C~~C~~~FC~~ 40 (63)
T 1x4v_A 11 FTNKCERAGCRQ-R-EMM--KLTCERCSRNFCIK 40 (63)
T ss_dssp TCCCCCSTTCCC-C-CSS--CCBCSSSCCBCCHH
T ss_pred cCCCCCccCCCC-C-Ccc--ceECCCCCcccCcc
Confidence 3567887 997 4 333 56999999999864
No 109
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=66.50 E-value=4.7 Score=27.71 Aligned_cols=30 Identities=20% Similarity=0.626 Sum_probs=22.7
Q ss_pred CCCcccc--CCccCCCccccccccccCCceEeCCCC
Q psy8222 61 EAAVCMH--CKRTQFTVLSRRHHCRKCGSVVCAPCS 94 (198)
Q Consensus 61 ~~~~C~~--C~~~~Fs~~~RrhhCr~CG~vvC~~Cs 94 (198)
....|.. |++ . .++ -..|+.||.+||..+-
T Consensus 13 ~g~~Cs~~~C~~-~-dfl--pf~C~~C~~~FC~~HR 44 (75)
T 1wys_A 13 IGQHCQVQHCRQ-R-DFL--PFVCDGCSGIFCLEHR 44 (75)
T ss_dssp CCCCCSCTTTCC-C-SCC--CEECTTTCCEECSTTC
T ss_pred cCCCcCcccCCC-c-cce--eeECcccCcCcCcccC
Confidence 4568887 997 3 333 6789999999998653
No 110
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=66.45 E-value=0.79 Score=34.11 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=25.0
Q ss_pred eEEEecCC--eEEEE--EeCChH-HHHHHHHHHHHHHHHH
Q psy8222 6 GWLIQTSS--KSFAV--HAATST-EKQEWMAHINKCIEDL 40 (198)
Q Consensus 6 ~f~i~t~~--KSf~v--~A~s~~-Ek~~Wi~~i~~~i~~l 40 (198)
.|.|-.+. ..|.+ .|+|.+ .|+.|++.|+++++..
T Consensus 75 kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~ 114 (119)
T 1fho_A 75 VLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEKY 114 (119)
T ss_dssp EEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHH
T ss_pred EEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHHH
Confidence 45553322 44556 899999 9999999999866654
No 111
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=65.57 E-value=3 Score=26.66 Aligned_cols=47 Identities=17% Similarity=0.292 Sum_probs=31.1
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
....|.+|.. .|.- ......||++||..|...+.. ....|..|-..+
T Consensus 4 ~~~~C~IC~~-~~~~---~~~~~~C~H~fc~~Ci~~~~~-------~~~~CP~Cr~~~ 50 (68)
T 1chc_A 4 VAERCPICLE-DPSN---YSMALPCLHAFCYVCITRWIR-------QNPTCPLCKVPV 50 (68)
T ss_dssp CCCCCSSCCS-CCCS---CEEETTTTEEESTTHHHHHHH-------HSCSTTTTCCCC
T ss_pred CCCCCeeCCc-cccC---CcEecCCCCeeHHHHHHHHHh-------CcCcCcCCChhh
Confidence 4567999998 6642 123456999999999866542 124677775444
No 112
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.79 E-value=1.7 Score=28.41 Aligned_cols=49 Identities=20% Similarity=0.477 Sum_probs=32.7
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
+...|.+|.. .|.- ...-..||++||..|...++.. ...|..|-..+..
T Consensus 14 ~~~~C~IC~~-~~~~---p~~~~~CgH~fC~~Ci~~~~~~-------~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 14 PYILCSICKG-YLID---ATTITECLHTFCKSCIVRHFYY-------SNRCPKCNIVVHQ 62 (72)
T ss_dssp GGGSCTTTSS-CCSS---CEECSSSCCEECHHHHHHHHHH-------CSSCTTTCCCCCS
T ss_pred CCCCCCCCCh-HHHC---cCEECCCCCHHHHHHHHHHHHc-------CCcCCCcCcccCc
Confidence 3467999988 5542 2233479999999998765422 3568888665543
No 113
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=63.05 E-value=1.7 Score=33.25 Aligned_cols=47 Identities=21% Similarity=0.417 Sum_probs=32.3
Q ss_pred CccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
..|.+|.. .|.- ......||++||..|...++.. ....|..|-..+.
T Consensus 55 ~~C~IC~~-~~~~---p~~~~~CgH~fC~~Ci~~~~~~------~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 55 LMCPICLD-MLKN---TMTTKECLHRFCADCIITALRS------GNKECPTCRKKLV 101 (165)
T ss_dssp HBCTTTSS-BCSS---EEEETTTCCEEEHHHHHHHHHT------TCCBCTTTCCBCC
T ss_pred CCCcccCh-HhhC---cCEeCCCCChhHHHHHHHHHHh------CcCCCCCCCCcCC
Confidence 37999988 5542 3344589999999998765431 2456888876553
No 114
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.00 E-value=5.2 Score=26.11 Aligned_cols=48 Identities=23% Similarity=0.442 Sum_probs=31.7
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHh
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDV 117 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~ 117 (198)
+...|.+|.. .|..-. ....-.||++||..|...++.. ...|..|-..
T Consensus 22 ~~~~C~IC~~-~~~~~~-~~~~l~C~H~fh~~Ci~~w~~~-------~~~CP~Cr~~ 69 (75)
T 1x4j_A 22 EQTLCVVCMC-DFESRQ-LLRVLPCNHEFHAKCVDKWLKA-------NRTCPICRAD 69 (75)
T ss_dssp SCCEETTTTE-ECCBTC-EEEEETTTEEEETTHHHHHHHH-------CSSCTTTCCC
T ss_pred CCCCCeECCc-ccCCCC-eEEEECCCCHhHHHHHHHHHHc-------CCcCcCcCCc
Confidence 5578999998 765321 2334469999999998766422 2367777443
No 115
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.60 E-value=3.8 Score=27.64 Aligned_cols=58 Identities=17% Similarity=0.291 Sum_probs=38.8
Q ss_pred CCccccCCCCCccccCCccCCCcc---------c-c-ccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 53 AAVWIPDNEAAVCMHCKRTQFTVL---------S-R-RHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 53 ~~~Wv~d~~~~~C~~C~~~~Fs~~---------~-R-rhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
.+.|.-|.+...|.+|.. .|.-. . . ...-..||++|+..|...++. ....|..|-..+
T Consensus 6 ~~~w~~~~~~~~C~IC~~-~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~-------~~~~CP~CR~~~ 74 (81)
T 2ecl_A 6 SGMWSWDVECDTCAICRV-QVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVK-------QNNRCPLCQQDW 74 (81)
T ss_dssp CCCCCCSCCCSCBTTTTB-CTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTT-------TCCBCTTTCCBC
T ss_pred eEEeeecCCCCCCcccCh-hhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHH-------hCCCCCCcCCCc
Confidence 467877778889999999 88541 1 1 112225999999999876642 124787775543
No 116
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=62.52 E-value=1.8 Score=30.72 Aligned_cols=48 Identities=17% Similarity=0.427 Sum_probs=31.7
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
.-.|.+|.. .|. .......||++||..|...+... ...|..|-..+..
T Consensus 15 ~~~C~IC~~-~~~---~p~~~~~CgH~fC~~Ci~~~~~~-------~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 15 HLMCVLCGG-YFI---DATTIIECLHSFCKTCIVRYLET-------SKYCPICDVQVHK 62 (108)
T ss_dssp GTBCTTTSS-BCS---SEEEETTTCCEEEHHHHHHHHTS-------CSBCTTTCCBSCS
T ss_pred cCCCccCCh-HHh---CcCEeCCCCChhhHHHHHHHHHh-------CCcCcCCCccccc
Confidence 457999988 553 23333489999999997655321 2668888665543
No 117
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.49 E-value=0.31 Score=31.59 Aligned_cols=48 Identities=17% Similarity=0.506 Sum_probs=30.5
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
+...|.+|.. .|.-- .. -.||++||..|...+.. .....|..|-..+.
T Consensus 14 ~~~~C~IC~~-~~~~p---~~-~~CgH~fC~~Ci~~~~~------~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 14 DKYKCEKCHL-VLCSP---KQ-TECGHRFCESCMAALLS------SSSPKCTACQESIV 61 (66)
T ss_dssp CCEECTTTCC-EESSC---CC-CSSSCCCCHHHHHHHHT------TSSCCCTTTCCCCC
T ss_pred cCCCCCCCCh-HhcCe---eE-CCCCCHHHHHHHHHHHH------hCcCCCCCCCcCCC
Confidence 3467999988 55321 11 48999999999876542 22345777755443
No 118
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=62.12 E-value=0.98 Score=32.26 Aligned_cols=56 Identities=16% Similarity=0.314 Sum_probs=35.9
Q ss_pred CCccccCCccCCCccc--------------cccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 62 AAVCMHCKRTQFTVLS--------------RRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~--------------RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
...|.+|.. .|..-. ....--.||++||..|...++.... ......|..|-..+..
T Consensus 25 ~~~C~ICl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~--~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 25 EEDCIICME-KLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGN--KDGSLQCPSCKTIYGE 94 (114)
T ss_dssp SCEETTTTE-ETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTC--CSSCCBCTTTCCBSSS
T ss_pred CCcCccCCh-hhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHccc--CCCCCcCCCCCCccCC
Confidence 358999998 774321 0111356999999999887653221 1345789999765543
No 119
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=61.20 E-value=2.9 Score=28.31 Aligned_cols=26 Identities=19% Similarity=0.708 Sum_probs=19.5
Q ss_pred CCCccccCCccCCCcccc-ccccccCCc
Q psy8222 61 EAAVCMHCKRTQFTVLSR-RHHCRKCGS 87 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~R-rhhCr~CG~ 87 (198)
..-.|..|+. .|.+... ..+|+.||.
T Consensus 27 v~Y~C~~CG~-~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 27 LKYICAECSS-KLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CCEECSSSCC-EECCCTTSTTCCSSSCC
T ss_pred EEEECCCCCC-cceeCCCCCccCCCCCc
Confidence 3457999999 8887643 467888887
No 120
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.85 E-value=2.8 Score=27.29 Aligned_cols=51 Identities=20% Similarity=0.341 Sum_probs=32.5
Q ss_pred CCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 60 NEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 60 ~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
.....|.+|.. .|..-..-. --.||++||..|...++.. ...|..|-..+.
T Consensus 13 ~~~~~C~IC~~-~~~~~~~~~-~~~C~H~f~~~Ci~~~~~~-------~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 13 NLHELCAVCLE-DFKPRDELG-ICPCKHAFHRKCLIKWLEV-------RKVCPLCNMPVL 63 (74)
T ss_dssp CCSCBCSSSCC-BCCSSSCEE-EETTTEEEEHHHHHHHHHH-------CSBCTTTCCBCS
T ss_pred CCCCCCcCCCc-ccCCCCcEE-EcCCCCEecHHHHHHHHHc-------CCcCCCcCcccc
Confidence 34568999998 764322211 1259999999998765421 237888865443
No 121
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=60.65 E-value=2.1 Score=29.72 Aligned_cols=47 Identities=21% Similarity=0.420 Sum_probs=31.1
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
.-.|.+|.. .|.- ......||++||..|...+.. ....|..|-..+.
T Consensus 22 ~~~C~IC~~-~~~~---p~~~~~CgH~fC~~Ci~~~~~-------~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 22 LLRCGICFE-YFNI---AMIIPQCSHNYCSLCIRKFLS-------YKTQCPTCCVTVT 68 (99)
T ss_dssp HTBCTTTCS-BCSS---EEECTTTCCEEEHHHHHHHHT-------TCCBCTTTCCBCC
T ss_pred CCCcccCCh-hhCC---cCEECCCCCHhhHHHHHHHHH-------CCCCCCCCCCcCC
Confidence 357999998 6642 222347999999999766542 1246777765544
No 122
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.07 E-value=1.5 Score=27.92 Aligned_cols=50 Identities=22% Similarity=0.553 Sum_probs=31.6
Q ss_pred CCCCccccCCccCCCcc---ccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHh
Q psy8222 60 NEAAVCMHCKRTQFTVL---SRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDV 117 (198)
Q Consensus 60 ~~~~~C~~C~~~~Fs~~---~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~ 117 (198)
.+...|.+|.. .|.-- .+...-..||++||..|...++.. ...|..|-..
T Consensus 13 ~~~~~C~IC~~-~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-------~~~CP~Cr~~ 65 (69)
T 2ea6_A 13 SGTVSCPICMD-GYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-------ANTCPTCRKK 65 (69)
T ss_dssp TCCCCCTTTCC-CHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-------CSSCTTTCCC
T ss_pred CCCCCCcccCc-cccccccccCCeEeCCCCChhcHHHHHHHHHc-------CCCCCCCCCc
Confidence 35578999998 66432 122245689999999998765421 2356666443
No 123
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=58.58 E-value=1.6 Score=28.11 Aligned_cols=51 Identities=22% Similarity=0.560 Sum_probs=33.1
Q ss_pred CCCccccCCccCCCcc---ccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 61 EAAVCMHCKRTQFTVL---SRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~---~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
+...|.+|.. .|.-- .+......||++||..|...++.. ...|..|-..+.
T Consensus 9 ~~~~C~IC~~-~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-------~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 9 GTVSCPICMD-GYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-------ANTCPTCRKKIN 62 (71)
T ss_dssp TCCBCTTTCC-BHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBCC
T ss_pred CCCCCcccCh-hhhccccccCCeEeCCCCChHhHHHHHHHHHc-------CCCCCCCCCccC
Confidence 4568999998 66432 122245689999999998765421 236777755443
No 124
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=58.49 E-value=4.7 Score=27.83 Aligned_cols=33 Identities=21% Similarity=0.627 Sum_probs=23.3
Q ss_pred CccccCCccCCCcc--ccccccccCCceEeCCCCCC
Q psy8222 63 AVCMHCKRTQFTVL--SRRHHCRKCGSVVCAPCSNK 96 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~--~RrhhCr~CG~vvC~~Cs~~ 96 (198)
.-|..|.. .|..- ..+..|..||..||..|-..
T Consensus 26 ~wCP~C~~-~~~~~~~~~~v~C~~C~~~FC~~C~~~ 60 (86)
T 2ct7_A 26 LWCAQCSF-GFIYEREQLEATCPQCHQTFCVRCKRQ 60 (86)
T ss_dssp ECCSSSCC-CEECCCSCSCEECTTTCCEECSSSCSB
T ss_pred eECcCCCc-hheecCCCCceEeCCCCCccccccCCc
Confidence 34667776 44221 34678999999999999753
No 125
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.28 E-value=3.3 Score=27.57 Aligned_cols=46 Identities=22% Similarity=0.527 Sum_probs=30.7
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
....|.+|.. .|.-- .--.||++||..|...++.. ...|..|-..+
T Consensus 14 ~~~~C~IC~~-~~~~p----~~~~CgH~fC~~Ci~~~~~~-------~~~CP~Cr~~~ 59 (81)
T 2csy_A 14 IPFRCFICRQ-AFQNP----VVTKCRHYFCESCALEHFRA-------TPRCYICDQPT 59 (81)
T ss_dssp CCSBCSSSCS-BCCSE----EECTTSCEEEHHHHHHHHHH-------CSBCSSSCCBC
T ss_pred CCCCCcCCCc-hhcCe----eEccCCCHhHHHHHHHHHHC-------CCcCCCcCccc
Confidence 4567999998 66432 12479999999998665421 34677775544
No 126
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=58.24 E-value=5 Score=25.28 Aligned_cols=29 Identities=28% Similarity=0.586 Sum_probs=18.3
Q ss_pred CCCccccCCccCCCcc-ccccccccCCceE
Q psy8222 61 EAAVCMHCKRTQFTVL-SRRHHCRKCGSVV 89 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~-~RrhhCr~CG~vv 89 (198)
....|..|+...|-.- ..|++|..||.+.
T Consensus 18 ~~k~CP~CG~~~fm~~~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 18 KNKFCPRCGPGVFMADHGDRWACGKCGYTE 47 (50)
T ss_dssp SSEECSSSCSSCEEEECSSEEECSSSCCEE
T ss_pred ecccCCCCCCceEEecCCCeEECCCCCCEE
Confidence 3567888986223221 2478888888764
No 127
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=55.99 E-value=4.3 Score=25.95 Aligned_cols=52 Identities=12% Similarity=0.265 Sum_probs=33.0
Q ss_pred CCCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 60 NEAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 60 ~~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
.....|.+|.. .|..- .....-.||++||..|...++.. ...|..|-..+..
T Consensus 12 ~~~~~C~IC~~-~~~~~-~~~~~~~C~H~fc~~Ci~~~~~~-------~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 12 DTEEKCTICLS-ILEEG-EDVRRLPCMHLFHQVCVDQWLIT-------NKKCPICRVDIEA 63 (69)
T ss_dssp TCCCSBTTTTB-CCCSS-SCEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCSBSCS
T ss_pred CCCCCCeeCCc-cccCC-CcEEEeCCCCHHHHHHHHHHHHc-------CCCCcCcCccccC
Confidence 34568999988 76421 12233469999999998765432 2248888655543
No 128
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=55.66 E-value=1.9 Score=27.02 Aligned_cols=50 Identities=22% Similarity=0.562 Sum_probs=31.4
Q ss_pred CCCccccCCccCCCcc---ccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 61 EAAVCMHCKRTQFTVL---SRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~---~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
+...|.+|.. .|.-- .+......||++||..|...+... ...|..|-..+
T Consensus 2 ~~~~C~IC~~-~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-------~~~CP~Cr~~~ 54 (64)
T 2xeu_A 2 AMVSCPICMD-GYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-------ANTCPTCRKKI 54 (64)
T ss_dssp CCCBCTTTCC-BHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-------CSBCTTTCCBC
T ss_pred CCCCCCccCh-hhhCccccCCCEEeCCCCCchhHHHHHHHHHc-------CCCCCCCCccC
Confidence 3457999988 66432 122245689999999998765421 23677665443
No 129
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.58 E-value=3.3 Score=25.37 Aligned_cols=32 Identities=22% Similarity=0.499 Sum_probs=22.9
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCe
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKR 97 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~ 97 (198)
+...|.+|.. .|.-- .--.||++||..|...+
T Consensus 14 ~~~~C~IC~~-~~~~p----~~~~CgH~fC~~Ci~~~ 45 (58)
T 2ecj_A 14 VEASCSVCLE-YLKEP----VIIECGHNFCKACITRW 45 (58)
T ss_dssp CCCBCSSSCC-BCSSC----CCCSSCCCCCHHHHHHH
T ss_pred cCCCCccCCc-ccCcc----EeCCCCCccCHHHHHHH
Confidence 4567999998 66432 11469999999997654
No 130
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=54.51 E-value=4.4 Score=29.37 Aligned_cols=57 Identities=19% Similarity=0.493 Sum_probs=33.8
Q ss_pred CCccccCCccCCCccccccccccCCce-----EeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSV-----VCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~v-----vC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
...|..|+. ....-...+||..|+.- +|..|-..-.+|.. -.-..-.|..|...+++
T Consensus 32 ~~~CP~Cq~-eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkA-CGAvdYFC~~chgLiSK 93 (101)
T 2jne_A 32 ELHCPQCQH-VLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKA-CGAVDYFCQHGHGLISK 93 (101)
T ss_dssp CCBCSSSCS-BEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEE-TTEEEEEETTTTEEECT
T ss_pred cccCccCCC-cceecCCEEECccccchhhccccCcchhhHHHHHHH-hcCcchhhccCCceeec
Confidence 368999998 76666667788888864 56666544322222 11233455666655544
No 131
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=54.50 E-value=5.2 Score=25.52 Aligned_cols=25 Identities=24% Similarity=0.741 Sum_probs=17.4
Q ss_pred ccccCCccCCCcc------------ccccccccCCceE
Q psy8222 64 VCMHCKRTQFTVL------------SRRHHCRKCGSVV 89 (198)
Q Consensus 64 ~C~~C~~~~Fs~~------------~RrhhCr~CG~vv 89 (198)
.|..|++ .|... .+.+.|..||+.|
T Consensus 6 ~C~~C~k-~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F 42 (60)
T 4gzn_C 6 FCNFCGK-TYRDASGLSRHRRAHLGYRPRSCPECGKCF 42 (60)
T ss_dssp ECTTTCC-EESSHHHHHHHHHHHHTCCCEECTTTCCEE
T ss_pred cCCCCCC-EeCCHHHHHHHHHHhCCCcCeECCCCCCCc
Confidence 5888998 88641 2346788888776
No 132
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=53.75 E-value=4.2 Score=27.61 Aligned_cols=49 Identities=24% Similarity=0.516 Sum_probs=30.7
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
+.-.|.+|.. .|. .-..-..||+.||..|....+... ....|..|-..+
T Consensus 12 ~~~~C~IC~~-~~~---~p~~~~~CgH~fC~~Ci~~~~~~~-----~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 12 DELLCLICKD-IMT---DAVVIPCCGNSYCDECIRTALLES-----DEHTCPTCHQND 60 (92)
T ss_dssp TTTEETTTTE-ECS---SCEECTTTCCEECHHHHHHHHHHC-----TTCCCTTTCCSS
T ss_pred cCCCCCCCCh-hhc---CceECCCCCCHHHHHHHHHHHHhc-----CCCcCcCCCCcC
Confidence 4567999998 554 222233499999999976553211 125677776544
No 133
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=53.05 E-value=3.5 Score=28.92 Aligned_cols=48 Identities=21% Similarity=0.385 Sum_probs=30.3
Q ss_pred CccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
..|.+|.. .|.-- .--.||++||..|........ .....|..|-..+.
T Consensus 22 ~~C~IC~~-~~~~p----~~~~CgH~fC~~Ci~~~~~~~----~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 22 LECPICLE-LIKEP----VSTKCDHIFCKFCMLKLLNQK----KGPSQCPLCKNDIT 69 (112)
T ss_dssp TSCSSSCC-CCSSC----CBCTTSCCCCSHHHHHHHHSS----SSSCCCTTTSCCCC
T ss_pred CCCcccCh-hhcCe----EECCCCCHHHHHHHHHHHHhC----CCCCCCcCCCCcCC
Confidence 36999988 66421 113799999999976654321 12356888855444
No 134
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=52.61 E-value=9.1 Score=28.80 Aligned_cols=36 Identities=17% Similarity=0.291 Sum_probs=28.7
Q ss_pred CcceEEEecCCeEEEEEeC---C--------hHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQTSSKSFAVHAA---T--------STEKQEWMAHINKCIE 38 (198)
Q Consensus 3 ~~n~f~i~t~~KSf~v~A~---s--------~~Ek~~Wi~~i~~~i~ 38 (198)
-+|-|.|.|....|+|.+. . .+.-+.|..+|++|+.
T Consensus 73 ~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALm 119 (125)
T 2coa_A 73 NPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALM 119 (125)
T ss_dssp CCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGG
T ss_pred CCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhcc
Confidence 4588999999999999873 1 2568889999988763
No 135
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=51.91 E-value=8.7 Score=24.11 Aligned_cols=24 Identities=29% Similarity=0.552 Sum_probs=17.5
Q ss_pred ccccCCccCCCcccc----ccccccCCce
Q psy8222 64 VCMHCKRTQFTVLSR----RHHCRKCGSV 88 (198)
Q Consensus 64 ~C~~C~~~~Fs~~~R----rhhCr~CG~v 88 (198)
.|+.|++ .|+...- -.+|..||.-
T Consensus 5 ~C~rCg~-~fs~~el~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 5 RCGKCWK-TFTDEQLKVLPGVRCPYCGYK 32 (48)
T ss_dssp CCCCTTT-TCCCCCSCCCSSSCCTTTCCS
T ss_pred EeeccCC-CccHHHHhhCCCcccCccCcE
Confidence 5899998 8886532 3678888863
No 136
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=51.41 E-value=5.3 Score=28.07 Aligned_cols=29 Identities=17% Similarity=0.491 Sum_probs=21.2
Q ss_pred CCCcccc--CCccCCCccccccccccCCceEeCCC
Q psy8222 61 EAAVCMH--CKRTQFTVLSRRHHCRKCGSVVCAPC 93 (198)
Q Consensus 61 ~~~~C~~--C~~~~Fs~~~RrhhCr~CG~vvC~~C 93 (198)
....|.. |++..| -..+|+.||..||..+
T Consensus 24 ~~~~C~~~~Ck~~~~----l~f~C~~C~~~FC~~H 54 (86)
T 1wfe_A 24 KSYSCSFKGCTDVEL----VAVICPYCEKNFCLRH 54 (86)
T ss_dssp CCEECCSTTCCCEES----SCEECTTTCCEECGGG
T ss_pred CCCCCCCcCCCCCCc----cceECCCCCccccccc
Confidence 3467887 987222 3569999999999754
No 137
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=51.30 E-value=3.6 Score=30.42 Aligned_cols=56 Identities=20% Similarity=0.385 Sum_probs=6.1
Q ss_pred CccccCCCCCccccCCccCCCcccc----------cccc----ccCCceEeCCCCCCeeecCCCCCCCeeeccchHHh
Q psy8222 54 AVWIPDNEAAVCMHCKRTQFTVLSR----------RHHC----RKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDV 117 (198)
Q Consensus 54 ~~Wv~d~~~~~C~~C~~~~Fs~~~R----------rhhC----r~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~ 117 (198)
+.|.-|-....|.+|.. .|.-.-- ...| -.||++|+..|...++.. ..+|..|-..
T Consensus 40 a~w~wd~~~d~CaICl~-~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~-------~~~CP~Cr~~ 109 (117)
T 4a0k_B 40 ALWAWDIVVDNCAICRN-HIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-------RQVCPLDNRE 109 (117)
T ss_dssp EEEEECCCC---------------------------------------------------------------------
T ss_pred EEEeecCCCCcCeECCh-hhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc-------CCcCCCCCCe
Confidence 45666777889999998 8753210 1111 269999999998887532 3568777554
No 138
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=51.30 E-value=3.7 Score=27.01 Aligned_cols=48 Identities=13% Similarity=0.030 Sum_probs=30.9
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
+.-.|.+|.. .|.-- .--.||++||..|...++. .....|..|-..+.
T Consensus 7 ~~~~C~IC~~-~~~~P----v~~~CgH~fc~~Ci~~~~~------~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLE-LMKDP----VIVSTGQTYERSSIQKWLD------AGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSC-CCSSE----EEETTTEEEEHHHHHHHHT------TTCCBCTTTCCBCS
T ss_pred ccCCCCCccc-cccCC----EEcCCCCeecHHHHHHHHH------HCcCCCCCCcCCCC
Confidence 3457999998 55421 1237999999999766542 12456777765543
No 139
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=48.71 E-value=8.4 Score=26.26 Aligned_cols=28 Identities=21% Similarity=0.558 Sum_probs=18.6
Q ss_pred CCCccccCCccCCCccccc----cccccCCceEeC
Q psy8222 61 EAAVCMHCKRTQFTVLSRR----HHCRKCGSVVCA 91 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~Rr----hhCr~CG~vvC~ 91 (198)
....|..|++ . -+.|. -||+.||..|=+
T Consensus 25 ~ky~C~fCgk-~--~vkR~a~GIW~C~~C~~~~AG 56 (72)
T 3jyw_9 25 ARYDCSFCGK-K--TVKRGAAGIWTCSCCKKTVAG 56 (72)
T ss_dssp SCBCCSSCCS-S--CBSBCSSSCBCCSSSCCCCCC
T ss_pred cCccCCCCCC-c--eeEecCCCeEECCCCCCEEeC
Confidence 3457999988 2 34443 588888887644
No 140
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=48.62 E-value=30 Score=27.68 Aligned_cols=47 Identities=4% Similarity=-0.198 Sum_probs=27.9
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
.-.|.+|.. .| . .-..-.||++||..|......-. ...|..|-..+.
T Consensus 208 ~~~c~i~~~-~~---~-dPv~~~~gh~f~~~~i~~~~~~~------~~~cP~~~~~~~ 254 (281)
T 2c2l_A 208 YLCGKISFE-LM---R-EPCITPSGITYDRKDIEEHLQRV------GHFNPVTRSPLT 254 (281)
T ss_dssp TTBCTTTCS-BC---S-SEEECSSCCEEETTHHHHHHHHT------CSSCTTTCCCCC
T ss_pred ccCCcCcCC-Hh---c-CCeECCCCCEECHHHHHHHHHHC------CCCCcCCCCCCc
Confidence 346888887 33 2 22334599999999976543211 112777755443
No 141
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=48.32 E-value=8.1 Score=26.36 Aligned_cols=28 Identities=21% Similarity=0.599 Sum_probs=17.5
Q ss_pred CCCccccCCccCCCcc------------ccccccccCCceE
Q psy8222 61 EAAVCMHCKRTQFTVL------------SRRHHCRKCGSVV 89 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~------------~RrhhCr~CG~vv 89 (198)
..-.|..|++ .|... .+.+.|..||+.|
T Consensus 27 ~~h~C~~Cgk-~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F 66 (85)
T 2lv2_A 27 ECHLCPVCGE-SFASKGAQERHLRLLHAAQVFPCKYCPATF 66 (85)
T ss_dssp TTEECTTSCC-EESSHHHHHHHHHTTSCSSSEECTTSSCEE
T ss_pred CCEECCCCCC-CcCcHHHHhhhhhhccCCCccCCCCCCCEe
Confidence 4457999998 88642 1235566666655
No 142
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=48.05 E-value=11 Score=22.16 Aligned_cols=12 Identities=25% Similarity=0.603 Sum_probs=9.0
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|++ .|..
T Consensus 5 ~~C~~C~~-~f~~ 16 (57)
T 3uk3_C 5 RECSYCGK-FFRS 16 (57)
T ss_dssp CBCTTTCC-BCSC
T ss_pred ccCCCCcc-hhCC
Confidence 36888998 8864
No 143
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=47.56 E-value=3.9 Score=28.12 Aligned_cols=49 Identities=14% Similarity=0.322 Sum_probs=31.4
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
....|.+|.. .|..-. ...--.||++||..|...++. ....|..|-..+
T Consensus 39 ~~~~C~IC~~-~~~~~~-~~~~l~C~H~Fh~~Ci~~wl~-------~~~~CP~Cr~~~ 87 (91)
T 2l0b_A 39 QEMCCPICCS-EYVKGD-VATELPCHHYFHKPCVSIWLQ-------KSGTCPVCRCMF 87 (91)
T ss_dssp SCSEETTTTE-ECCTTC-EEEEETTTEEEEHHHHHHHHT-------TTCBCTTTCCBS
T ss_pred CCCCCcccCh-hhcCCC-cEEecCCCChHHHHHHHHHHH-------cCCcCcCcCccC
Confidence 4567999998 775422 122235999999999876642 123677775433
No 144
>3hcj_A MSRB, peptide methionine sulfoxide reductase; methionine sulfoxide reductase B, oxidized form, oxidoreductase; 1.66A {Xanthomonas campestris PV} PDB: 3hci_A*
Probab=46.78 E-value=4.9 Score=31.37 Aligned_cols=54 Identities=11% Similarity=0.222 Sum_probs=31.8
Q ss_pred EEEEeCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccc-CCCCCccccCCc
Q psy8222 16 FAVHAATSTEKQEWMAHINKCIEDLLRKSGKKPAATHAAVWIP-DNEAAVCMHCKR 70 (198)
Q Consensus 16 f~v~A~s~~Ek~~Wi~~i~~~i~~ll~~~g~~~~~~~~~~Wv~-d~~~~~C~~C~~ 70 (198)
|.|.-.+.+++++|.+.|....-..++..|..++.. -.-|.. ..-.=.|..|+.
T Consensus 4 ~dlt~~~~~~~~e~~~~Ltp~qy~V~r~~gTE~pft-g~y~~~~~~G~Y~C~~Cg~ 58 (154)
T 3hcj_A 4 FDLTPPSPAQRDALIAGLSDEEQRVLLHHGTEAPFC-GVFLDNKLDGVYTCRLCGL 58 (154)
T ss_dssp SCCCCCCHHHHHHHHHTSCHHHHHHHSCCSSSCCCC-CCCCSSCSSEEEEETTTCC
T ss_pred ccccCCCHhHHHHHHhhCCHHHHHHHHhcCCCCCCc-CCCCCCCCCEEEEccCCCC
Confidence 445556789999999988776667777776543321 111211 112345666765
No 145
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=46.31 E-value=8.8 Score=26.86 Aligned_cols=28 Identities=29% Similarity=0.739 Sum_probs=19.6
Q ss_pred CCccccCCccCCCccccc----cccccCCceEeCC
Q psy8222 62 AAVCMHCKRTQFTVLSRR----HHCRKCGSVVCAP 92 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~Rr----hhCr~CG~vvC~~ 92 (198)
...|..|++ . -+.|. -||+.||..|=+.
T Consensus 35 ky~CpfCGk-~--~vkR~a~GIW~C~kCg~~~AGG 66 (83)
T 3j21_i 35 KHTCPVCGR-K--AVKRISTGIWQCQKCGATFAGG 66 (83)
T ss_dssp CBCCSSSCS-S--CEEEEETTEEEETTTCCEEECC
T ss_pred ccCCCCCCC-c--eeEecCcCeEEcCCCCCEEeCC
Confidence 457999998 2 34443 5899998887553
No 146
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=45.32 E-value=21 Score=24.09 Aligned_cols=39 Identities=21% Similarity=0.587 Sum_probs=26.3
Q ss_pred ccCCCCCcccc--CCccCCCc--cccccccc-----cCCceEeCCCCCC
Q psy8222 57 IPDNEAAVCMH--CKRTQFTV--LSRRHHCR-----KCGSVVCAPCSNK 96 (198)
Q Consensus 57 v~d~~~~~C~~--C~~~~Fs~--~~RrhhCr-----~CG~vvC~~Cs~~ 96 (198)
+.+.....|.. |+. .... -.++..|. .||..||..|...
T Consensus 20 v~~~~~~~CP~p~C~~-~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~ 67 (80)
T 2jmo_A 20 VLQMGGVLCPRPGCGA-GLLPEPDQRKVTCEGGNGLGCGFAFCRECKEA 67 (80)
T ss_dssp SCCCSSCCCCSSSCCC-CCCCCSCTTSBCTTSSSTTCCSCCEETTTTEE
T ss_pred hhhCCcEECCCCCCCc-ccEECCCCCcCCCCCCCCCCCCCeeccccCcc
Confidence 33344667775 776 4322 23568897 8999999999754
No 147
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.30 E-value=5.5 Score=27.11 Aligned_cols=12 Identities=33% Similarity=0.584 Sum_probs=9.7
Q ss_pred CCccccCCccCCC
Q psy8222 62 AAVCMHCKRTQFT 74 (198)
Q Consensus 62 ~~~C~~C~~~~Fs 74 (198)
.-.|..|++ .|.
T Consensus 24 ~~~C~~C~k-~f~ 35 (98)
T 2gqj_A 24 EAVCPTCNV-VTR 35 (98)
T ss_dssp CCCCTTTCC-CCS
T ss_pred CcCCCCCCC-Chh
Confidence 457999999 887
No 148
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=45.11 E-value=11 Score=26.96 Aligned_cols=28 Identities=25% Similarity=0.698 Sum_probs=19.8
Q ss_pred CCccccCCccCCCccccc----cccccCCceEeCC
Q psy8222 62 AAVCMHCKRTQFTVLSRR----HHCRKCGSVVCAP 92 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~Rr----hhCr~CG~vvC~~ 92 (198)
...|..|++ . -+.|. -||+.||..|=+.
T Consensus 36 ky~CpfCgk-~--~vkR~a~GIW~C~~Cg~~~AGG 67 (92)
T 3iz5_m 36 KYFCEFCGK-F--AVKRKAVGIWGCKDCGKVKAGG 67 (92)
T ss_dssp CBCCTTTCS-S--CBEEEETTEEECSSSCCEEECC
T ss_pred cccCcccCC-C--eeEecCcceEEcCCCCCEEeCC
Confidence 457999998 2 34443 5899999988654
No 149
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=44.95 E-value=11 Score=26.96 Aligned_cols=28 Identities=21% Similarity=0.522 Sum_probs=19.6
Q ss_pred CCccccCCccCCCccccc----cccccCCceEeCC
Q psy8222 62 AAVCMHCKRTQFTVLSRR----HHCRKCGSVVCAP 92 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~Rr----hhCr~CG~vvC~~ 92 (198)
...|..|+++ -+.|. -||+.||..|=+.
T Consensus 36 ky~CpfCgk~---~vkR~a~GIW~C~~C~~~~AGG 67 (92)
T 3izc_m 36 RYDCSFCGKK---TVKRGAAGIWTCSCCKKTVAGG 67 (92)
T ss_dssp CCCCSSSCSS---CCEEEETTEEECTTTCCEEECC
T ss_pred CCcCCCCCCc---eeeecccceEEcCCCCCEEeCC
Confidence 4579999982 34443 5899999888654
No 150
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=44.59 E-value=5.2 Score=30.09 Aligned_cols=47 Identities=19% Similarity=0.499 Sum_probs=31.8
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
+.-.|.+|.. .|. .-.. -.||++||..|...... .....|..|-..+
T Consensus 30 ~~~~C~IC~~-~~~---~pv~-~~CgH~FC~~Ci~~~~~------~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 30 AKYLCSACRN-VLR---RPFQ-AQCGHRYCSFCLASILS------SGPQNCAACVHEG 76 (141)
T ss_dssp GGGBCTTTCS-BCS---SEEE-CTTSCEEEHHHHHHHGG------GSCEECHHHHHTT
T ss_pred cCcCCCCCCh-hhc---CcEE-CCCCCccCHHHHHHHHh------cCCCCCCCCCCcc
Confidence 4457999988 543 2222 38999999999876542 1235799997754
No 151
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=44.36 E-value=14 Score=21.71 Aligned_cols=11 Identities=18% Similarity=0.643 Sum_probs=8.1
Q ss_pred ccccCCccCCCc
Q psy8222 64 VCMHCKRTQFTV 75 (198)
Q Consensus 64 ~C~~C~~~~Fs~ 75 (198)
.|..|++ .|..
T Consensus 3 ~C~~C~~-~f~~ 13 (57)
T 1bbo_A 3 ICEECGI-RXKK 13 (57)
T ss_dssp BCTTTCC-BCSS
T ss_pred cCCCCcC-cCCC
Confidence 5888888 7754
No 152
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=44.19 E-value=18 Score=22.62 Aligned_cols=14 Identities=21% Similarity=0.596 Sum_probs=10.8
Q ss_pred CCCccccCCccCCCc
Q psy8222 61 EAAVCMHCKRTQFTV 75 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~ 75 (198)
..-.|..|++ .|..
T Consensus 16 ~~~~C~~C~k-~f~~ 29 (74)
T 2lce_A 16 KPYKCDRCQA-SFRY 29 (74)
T ss_dssp CSBCCTTSSC-CBSC
T ss_pred CCeECCCCCc-eeCC
Confidence 4457999999 8864
No 153
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=44.15 E-value=15 Score=23.74 Aligned_cols=36 Identities=19% Similarity=0.488 Sum_probs=25.1
Q ss_pred CCCccccCCccCCCccc--ccccccc--CCceEeCCCCCCe
Q psy8222 61 EAAVCMHCKRTQFTVLS--RRHHCRK--CGSVVCAPCSNKR 97 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~--RrhhCr~--CG~vvC~~Cs~~~ 97 (198)
....|..|+. ...... -.-.|+. ||..||..|....
T Consensus 5 ~~k~CP~C~~-~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~ 44 (60)
T 1wd2_A 5 NTKECPKCHV-TIEKDGGCNHMVCRNQNCKAEFCWVCLGPW 44 (60)
T ss_dssp CCCCCTTTCC-CCSSCCSCCSSSCCSSGGGSCCSSSSCSCS
T ss_pred cceECcCCCC-eeEeCCCCCcEEECCCCcCCEEeeCcCCCc
Confidence 3578999987 443322 2457888 9999999997653
No 154
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=44.11 E-value=5 Score=29.72 Aligned_cols=44 Identities=20% Similarity=0.480 Sum_probs=28.6
Q ss_pred CccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhh
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVL 118 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l 118 (198)
..|.+|.. .|.-- .--.||++||..|...+.. ....|..|-..+
T Consensus 54 ~~C~iC~~-~~~~~----~~~~CgH~fc~~Ci~~~~~-------~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 54 LQCIICSE-YFIEA----VTLNCAHSFCSYCINEWMK-------RKIECPICRKDI 97 (138)
T ss_dssp SBCTTTCS-BCSSE----EEETTSCEEEHHHHHHHTT-------TCSBCTTTCCBC
T ss_pred CCCcccCc-ccCCc----eECCCCCCccHHHHHHHHH-------cCCcCCCCCCcC
Confidence 36999998 66421 2236999999999765431 234577775544
No 155
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=43.83 E-value=7.7 Score=25.20 Aligned_cols=24 Identities=33% Similarity=0.650 Sum_probs=15.8
Q ss_pred CCCccccCCccCCCccccccccccCCc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGS 87 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~ 87 (198)
....|+.|.. .. --+-..||.||.
T Consensus 18 ~k~ICrkC~A-Rn--p~~A~~CRKCg~ 41 (56)
T 2ayj_A 18 LKKVCRKCGA-LN--PIRATKCRRCHS 41 (56)
T ss_dssp CCEEETTTCC-EE--CTTCSSCTTTCC
T ss_pred chhhhccccC-cC--CcccccccCCCC
Confidence 3456888877 22 246788888873
No 156
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=43.00 E-value=15 Score=21.94 Aligned_cols=11 Identities=45% Similarity=0.987 Sum_probs=8.2
Q ss_pred ccccCCccCCCc
Q psy8222 64 VCMHCKRTQFTV 75 (198)
Q Consensus 64 ~C~~C~~~~Fs~ 75 (198)
.|..|++ .|..
T Consensus 4 ~C~~C~~-~f~~ 14 (60)
T 2adr_A 4 VCEVCTR-AFAR 14 (60)
T ss_dssp CCTTTCC-CBSC
T ss_pred cCCCCcc-ccCC
Confidence 5888888 7753
No 157
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=42.71 E-value=5.6 Score=24.78 Aligned_cols=12 Identities=33% Similarity=0.586 Sum_probs=8.1
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|++ .|+.
T Consensus 15 ~~C~~C~k-~F~~ 26 (62)
T 1vd4_A 15 FKCPVCSS-TFTD 26 (62)
T ss_dssp EECSSSCC-EEEH
T ss_pred ccCCCCCc-hhcc
Confidence 35778887 7753
No 158
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=42.53 E-value=12 Score=24.38 Aligned_cols=53 Identities=15% Similarity=0.347 Sum_probs=33.6
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
....|.+|.. .|.--. --.||++||..|......... .......|..|-..+.
T Consensus 18 ~~~~C~IC~~-~~~~p~----~~~CgH~fC~~Ci~~~~~~~~-~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 18 EEVTCPICLE-LLKEPV----SADCNHSFCRACITLNYESNR-NTDGKGNCPVCRVPYP 70 (85)
T ss_dssp TTTSCTTTCS-CCSSCE----ECTTSCCBCHHHHHHHHHHSB-CTTSCBCCTTTCCCCC
T ss_pred cCCCCcCCCh-hhCcce----eCCCCCHHHHHHHHHHHHhcc-CCCCCCCCCCCCCcCC
Confidence 4568999998 664321 235999999999876543221 1233567888866554
No 159
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=42.08 E-value=8.2 Score=28.71 Aligned_cols=29 Identities=21% Similarity=0.488 Sum_probs=19.7
Q ss_pred CCCccccCCccCCCcccc----ccccccCCceEeCC
Q psy8222 61 EAAVCMHCKRTQFTVLSR----RHHCRKCGSVVCAP 92 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~R----rhhCr~CG~vvC~~ 92 (198)
....|..|+++ -+.| ..+|+.||.+|=+.
T Consensus 59 akytCPfCGk~---~vKR~avGIW~C~~Cgk~fAGG 91 (116)
T 3cc2_Z 59 EDHACPNCGED---RVDRQGTGIWQCSYCDYKFTGG 91 (116)
T ss_dssp SCEECSSSCCE---EEEEEETTEEEETTTCCEEECC
T ss_pred cCCcCCCCCCc---eeEecCceeEECCCCCCEEECC
Confidence 45678888872 2333 47888888887654
No 160
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=41.90 E-value=6.8 Score=29.70 Aligned_cols=47 Identities=21% Similarity=0.507 Sum_probs=30.9
Q ss_pred CccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
-.|.+|.. .|.--.. -.||++||..|....... ....|..|-..+..
T Consensus 79 ~~C~IC~~-~~~~pv~----~~CgH~fC~~Ci~~~~~~------~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 79 FMCVCCQE-LVYQPVT----TECFHNVCKDCLQRSFKA------QVFSCPACRHDLGQ 125 (150)
T ss_dssp TBCTTTSS-BCSSEEE----CTTSCEEEHHHHHHHHHT------TCCBCTTTCCBCCT
T ss_pred CEeecCCh-hhcCCEE----cCCCCchhHHHHHHHHHh------CCCcCCCCCccCCC
Confidence 57999988 6542111 489999999998665431 23468888655543
No 161
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=41.88 E-value=9.8 Score=24.17 Aligned_cols=25 Identities=32% Similarity=0.699 Sum_probs=16.2
Q ss_pred CCCccccCCccCCCccccccccccCCce
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSV 88 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~v 88 (198)
....|+.|+. . +-.+.-+|+.||..
T Consensus 13 ~k~iCpkC~a-~--~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 13 KKYVCLRCGA-T--NPWGAKKCRKCGYK 37 (51)
T ss_dssp SEEECTTTCC-E--ECTTCSSCSSSSSC
T ss_pred CCccCCCCCC-c--CCCCceecCCCCCc
Confidence 3456888876 3 33466777777764
No 162
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=41.87 E-value=19 Score=24.82 Aligned_cols=32 Identities=28% Similarity=0.681 Sum_probs=23.9
Q ss_pred CccccCCccCCCccccccccccCCc----eEeCCCCCC
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGS----VVCAPCSNK 96 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~----vvC~~Cs~~ 96 (198)
-.|-.|.+ ..+..+|++|..|.. -+|..|-..
T Consensus 22 ~~Cd~C~~--~pI~G~RykC~~C~d~~~yDLC~~C~~~ 57 (82)
T 2fc7_A 22 FKCDNCGI--EPIQGVRWHCQDCPPEMSLDFCDSCSDC 57 (82)
T ss_dssp CCCSSSCC--SSEESCEEEESSSCSSSCCEEEGGGTTC
T ss_pred CCCCCCCC--CcceeceEECCcCCCCcceecHHHHHhC
Confidence 46888975 456778999999975 578877554
No 163
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=41.09 E-value=9.7 Score=29.08 Aligned_cols=24 Identities=42% Similarity=0.963 Sum_probs=14.6
Q ss_pred CccccCCccCCCccccccccccCCc
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGS 87 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~ 87 (198)
-.|..|++ .|..+.....|..||.
T Consensus 133 y~C~~Cg~-~~~~~~~~~~Cp~CG~ 156 (165)
T 2lcq_A 133 YVCIGCGR-KFSTLPPGGVCPDCGS 156 (165)
T ss_dssp EEESSSCC-EESSCCGGGBCTTTCC
T ss_pred EECCCCCC-cccCCCCCCcCCCCCC
Confidence 45777777 6765544445666664
No 164
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=40.96 E-value=18 Score=26.23 Aligned_cols=27 Identities=22% Similarity=0.465 Sum_probs=20.3
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCC
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPC 93 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~C 93 (198)
...|..|.. .=++ .-|-.||.|.|++=
T Consensus 24 ~~~C~~C~~-~~~~----W~CL~CG~vgCgr~ 50 (109)
T 3c5k_A 24 TQPCGDCGT-IQEN----WVCLSCYQVYCGRY 50 (109)
T ss_dssp TCCCTTTCC-CSSE----EEETTTCCEEECTT
T ss_pred CCcCccccC-CCCe----eeeeecCccccCCC
Confidence 467999998 4444 34999999999753
No 165
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=40.68 E-value=7.2 Score=27.94 Aligned_cols=48 Identities=19% Similarity=0.324 Sum_probs=29.7
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
+.-.|.+|.. .|.-- .. -.||++||..|...++... ...|..|-..+.
T Consensus 17 ~~~~C~IC~~-~~~~p---~~-~~CgH~fC~~Ci~~~~~~~------~~~CP~Cr~~~~ 64 (118)
T 3hct_A 17 SKYECPICLM-ALREA---VQ-TPCGHRFCKACIIKSIRDA------GHKCPVDNEILL 64 (118)
T ss_dssp GGGBCTTTCS-BCSSE---EE-CTTSCEEEHHHHHHHHHHH------CSBCTTTCCBCC
T ss_pred CCCCCCcCCh-hhcCe---EE-CCcCChhhHHHHHHHHhhC------CCCCCCCCCCcC
Confidence 3457999998 65422 22 2699999999976543211 126777754443
No 166
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=40.37 E-value=45 Score=20.84 Aligned_cols=14 Identities=21% Similarity=0.586 Sum_probs=10.7
Q ss_pred CCCccccCCccCCCc
Q psy8222 61 EAAVCMHCKRTQFTV 75 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~ 75 (198)
..-.|..|.+ .|..
T Consensus 17 ~~~~C~~C~~-~f~~ 30 (77)
T 2cot_A 17 RRYKCDECGK-SFSH 30 (77)
T ss_dssp CSSBCSSSCC-BCSC
T ss_pred CCEECCCCCc-ccCC
Confidence 4567999999 8863
No 167
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=39.54 E-value=10 Score=25.57 Aligned_cols=52 Identities=17% Similarity=0.493 Sum_probs=33.5
Q ss_pred CCCccccCCccCCCccccc-cccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 61 EAAVCMHCKRTQFTVLSRR-HHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~Rr-hhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
+...|.+|.. +|++-..+ .-| .||+.||..|..... . .....|..|-..+..
T Consensus 10 ~~~~CpICle-~~~~~d~~~~p~-~CGH~fC~~Cl~~~~--~----~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 10 DPVECPLCME-PLEIDDINFFPC-TCGYQICRFCWHRIR--T----DENGLCPACRKPYPE 62 (78)
T ss_dssp CCCBCTTTCC-BCCTTTTTCCSS-TTSCCCCHHHHHHHT--T----SSCSBCTTTCCBCSS
T ss_pred cCCcCCccCc-cCcccccccccc-CCCCCcCHHHHHHHH--h----cCCCCCCCCCCccCC
Confidence 4567999998 88653222 223 599999999965421 1 134578888665543
No 168
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=38.75 E-value=14 Score=26.06 Aligned_cols=30 Identities=27% Similarity=0.612 Sum_probs=21.0
Q ss_pred CccccCCccCCCccccccccccCCceEeCCCCC
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSN 95 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~ 95 (198)
..|.+|.. |+ ..-..-||.||+||=..|..
T Consensus 16 ~~C~VC~~--~t-~~~l~pCRvC~RvfH~~CL~ 45 (89)
T 1wil_A 16 EMCDVCEV--WT-AESLFPCRVCTRVFHDGCLR 45 (89)
T ss_dssp CCCTTTCC--CC-SSCCSSCSSSSSCCCHHHHH
T ss_pred cccCcccc--cc-ccceeccccccccccHhhcc
Confidence 57888985 44 34567899999987555543
No 169
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=37.48 E-value=17 Score=24.37 Aligned_cols=27 Identities=30% Similarity=0.849 Sum_probs=18.1
Q ss_pred CCCccccCCccCCCccccccccccC-CceEeCCC
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKC-GSVVCAPC 93 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~C-G~vvC~~C 93 (198)
+-.-|.+|.. . .. ..|.-| |.++|..|
T Consensus 7 e~pWC~ICne-D--At---lrC~gCdgDLYC~rC 34 (67)
T 2d8v_A 7 GLPWCCICNE-D--AT---LRCAGCDGDLYCARC 34 (67)
T ss_dssp CCSSCTTTCS-C--CC---EEETTTTSEEECSSH
T ss_pred CCCeeEEeCC-C--Ce---EEecCCCCceehHHH
Confidence 4567889987 3 22 457777 77777765
No 170
>2k2d_A Ring finger and CHY zinc finger domain- containing protein 1; zinc-binding protein, cytoplasm, metal-binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=37.37 E-value=8.2 Score=26.56 Aligned_cols=12 Identities=33% Similarity=0.717 Sum_probs=8.6
Q ss_pred ccccCCccCCCcc
Q psy8222 64 VCMHCKRTQFTVL 76 (198)
Q Consensus 64 ~C~~C~~~~Fs~~ 76 (198)
.|..|++ .|.+-
T Consensus 39 ~CnDC~~-~s~v~ 50 (79)
T 2k2d_A 39 LCNDCNG-RSTVQ 50 (79)
T ss_dssp EESSSCC-EEEEE
T ss_pred ECCCCCC-CccCC
Confidence 5888988 66543
No 171
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=37.07 E-value=9.8 Score=26.04 Aligned_cols=54 Identities=17% Similarity=0.418 Sum_probs=30.3
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecC-CCCCCCeeeccc--hHHh
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLP-SQSAKPLRVCLT--CYDV 117 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp-~~~~~~~RVC~~--C~~~ 117 (198)
...|.+|.. .|..-. -..-..||+.||..|....+... ..+....-.|.. |-..
T Consensus 5 ~~~C~IC~~-~~~~~~-~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLG-EYPVEQ-MTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCC-CCBGGG-EEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCc-cccccc-ceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 457999987 654211 11123699999999977653221 012222345766 6544
No 172
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=36.84 E-value=13 Score=18.14 Aligned_cols=11 Identities=18% Similarity=0.458 Sum_probs=7.2
Q ss_pred ccccccCCceE
Q psy8222 79 RHHCRKCGSVV 89 (198)
Q Consensus 79 rhhCr~CG~vv 89 (198)
.+.|..||+.|
T Consensus 3 ~~~C~~C~k~f 13 (27)
T 2kvh_A 3 PFSCSLCPQRS 13 (27)
T ss_dssp CEECSSSSCEE
T ss_pred CccCCCcChhh
Confidence 45677777765
No 173
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=36.70 E-value=5.5 Score=28.44 Aligned_cols=52 Identities=21% Similarity=0.568 Sum_probs=33.3
Q ss_pred CCCCccccCCccCCCcc---ccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 60 NEAAVCMHCKRTQFTVL---SRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 60 ~~~~~C~~C~~~~Fs~~---~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
.....|.+|.. .|.-. .+.-..-.||++||..|...+.. ....|..|-..+.
T Consensus 70 ~~~~~C~iC~~-~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~-------~~~~CP~Cr~~~~ 124 (133)
T 4ap4_A 70 SGTVSCPICMD-GYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-------NANTCPTCRKKIN 124 (133)
T ss_dssp SSSCBCTTTCC-BHHHHHHTTCCEEEETTSBEEEHHHHHHHHH-------HCSBCTTTCCBCC
T ss_pred CCCCCCCCCCC-ccccccccCcceEeCCCCChhhHHHHHHHHH-------cCCCCCCCCCcCC
Confidence 45678999988 66532 12224557999999999876542 2346777755443
No 174
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.15 E-value=15 Score=22.74 Aligned_cols=12 Identities=17% Similarity=0.515 Sum_probs=8.6
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|.+ .|..
T Consensus 10 ~~C~~C~k-~f~~ 21 (70)
T 1x5w_A 10 EKCSECSY-SCSS 21 (70)
T ss_dssp EECSSSSC-EESS
T ss_pred eECCCCCc-ccCC
Confidence 46888888 7754
No 175
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=36.05 E-value=9.5 Score=27.04 Aligned_cols=47 Identities=15% Similarity=0.337 Sum_probs=29.9
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
.-.|.+|.. .|.-- .. -.||++||..|...+.... ...|..|-..+.
T Consensus 23 ~~~C~IC~~-~~~~p---~~-~~CgH~fC~~Ci~~~~~~~------~~~CP~Cr~~~~ 69 (116)
T 1rmd_A 23 SISCQICEH-ILADP---VE-TSCKHLFCRICILRCLKVM------GSYCPSCRYPCF 69 (116)
T ss_dssp HTBCTTTCS-BCSSE---EE-CTTSCEEEHHHHHHHHHHT------CSBCTTTCCBCC
T ss_pred CCCCCCCCc-HhcCc---EE-cCCCCcccHHHHHHHHhHC------cCcCCCCCCCCC
Confidence 357999988 66422 11 3799999999976554221 235777755544
No 176
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=35.39 E-value=18 Score=24.62 Aligned_cols=29 Identities=24% Similarity=0.496 Sum_probs=19.4
Q ss_pred CCCccccCCccCCCccccc----cccccCCceEeCC
Q psy8222 61 EAAVCMHCKRTQFTVLSRR----HHCRKCGSVVCAP 92 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~Rr----hhCr~CG~vvC~~ 92 (198)
....|..|++ .-+.|. -+|+.||.+|=+.
T Consensus 26 ~ky~C~fCgk---~~vkR~a~GIW~C~~C~~~~AGG 58 (73)
T 1ffk_W 26 KKYKCPVCGF---PKLKRASTSIWVCGHCGYKIAGG 58 (73)
T ss_pred cCccCCCCCC---ceeEEEEeEEEECCCCCcEEECC
Confidence 4467999987 233443 6788888887543
No 177
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=35.20 E-value=16 Score=22.80 Aligned_cols=13 Identities=23% Similarity=0.710 Sum_probs=9.3
Q ss_pred CCccccCCccCCCc
Q psy8222 62 AAVCMHCKRTQFTV 75 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~ 75 (198)
.-.|..|.+ .|..
T Consensus 14 ~~~C~~C~k-~f~~ 26 (72)
T 1x6e_A 14 PYGCVECGK-AFSR 26 (72)
T ss_dssp CEECSSSCC-EESS
T ss_pred CccCCCCCC-ccCC
Confidence 346888888 7754
No 178
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=35.13 E-value=11 Score=27.44 Aligned_cols=29 Identities=17% Similarity=0.602 Sum_probs=19.6
Q ss_pred CCccccCCccCCCccccc----cccccCCceEeCCC
Q psy8222 62 AAVCMHCKRTQFTVLSRR----HHCRKCGSVVCAPC 93 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~Rr----hhCr~CG~vvC~~C 93 (198)
...|..|+++ -+.|. -||+.||..|=+.-
T Consensus 36 ky~CpfCgk~---~vKR~a~GIW~C~kCg~~~AGGA 68 (103)
T 4a17_Y 36 KYGCPFCGKV---AVKRAAVGIWKCKPCKKIIAGGA 68 (103)
T ss_dssp CEECTTTCCE---EEEEEETTEEEETTTTEEEECCS
T ss_pred CCCCCCCCCc---eeeecCcceEEcCCCCCEEeCCc
Confidence 4569999872 34443 58888988886543
No 179
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=34.42 E-value=9.3 Score=29.03 Aligned_cols=33 Identities=21% Similarity=0.487 Sum_probs=23.3
Q ss_pred CCCccccCCccCCCccccccccccCCceEeCCCCCCee
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRF 98 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~ 98 (198)
+.-.|.+|.. .|. .-..+ .||++||..|....+
T Consensus 17 ~~~~C~IC~~-~~~---~pv~~-~CgH~fC~~Ci~~~~ 49 (170)
T 3hcs_A 17 SKYECPICLM-ALR---EAVQT-PCGHRFCKACIIKSI 49 (170)
T ss_dssp GGGBCTTTCS-BCS---SEEEC-TTSCEEEHHHHHHHH
T ss_pred CCCCCCCCCh-hhc---CcEEC-CCCCHHHHHHHHHHH
Confidence 3457999998 553 22334 699999999986643
No 180
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=34.35 E-value=15 Score=17.88 Aligned_cols=11 Identities=27% Similarity=0.685 Sum_probs=7.4
Q ss_pred ccccccCCceE
Q psy8222 79 RHHCRKCGSVV 89 (198)
Q Consensus 79 rhhCr~CG~vv 89 (198)
.+.|..||+.|
T Consensus 3 ~~~C~~C~k~f 13 (28)
T 2kvf_A 3 PYSCSVCGKRF 13 (28)
T ss_dssp SEECSSSCCEE
T ss_pred CccCCCCCccc
Confidence 45677777765
No 181
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=34.28 E-value=19 Score=31.28 Aligned_cols=44 Identities=25% Similarity=0.632 Sum_probs=30.1
Q ss_pred CCCccccCCccCCCccccccccccCCce-EeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSV-VCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~v-vC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
+...|.+|.. .|.-. .--.||++ ||..|.... +.|..|-..+..
T Consensus 294 ~~~~C~IC~~-~~~~~----v~lpCgH~~fC~~C~~~~-----------~~CP~CR~~i~~ 338 (345)
T 3t6p_A 294 EERTCKVCMD-KEVSV----VFIPCGHLVVCQECAPSL-----------RKCPICRGIIKG 338 (345)
T ss_dssp TTCBCTTTSS-SBCCE----EEETTCCEEECTTTGGGC-----------SBCTTTCCBCCE
T ss_pred CCCCCCccCC-cCCce----EEcCCCChhHhHHHHhcC-----------CcCCCCCCCccC
Confidence 3468999998 65421 22379999 999997642 678888665543
No 182
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.24 E-value=15 Score=23.25 Aligned_cols=12 Identities=17% Similarity=0.260 Sum_probs=8.7
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|++ .|..
T Consensus 8 ~~C~~C~k-~f~~ 19 (78)
T 2d9h_A 8 LQCEICGF-TCRQ 19 (78)
T ss_dssp EECSSSCC-EESS
T ss_pred eECCCCCC-eeCC
Confidence 35888888 7754
No 183
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=34.18 E-value=22 Score=22.64 Aligned_cols=27 Identities=26% Similarity=0.614 Sum_probs=15.5
Q ss_pred CCccccCCccCCC-ccccccccccCCce
Q psy8222 62 AAVCMHCKRTQFT-VLSRRHHCRKCGSV 88 (198)
Q Consensus 62 ~~~C~~C~~~~Fs-~~~RrhhCr~CG~v 88 (198)
...|..|+...|- ...-|++|..||..
T Consensus 18 ~~fCPkCG~~~~ma~~~dr~~C~kCgyt 45 (55)
T 2k4x_A 18 HRFCPRCGPGVFLAEHADRYSCGRCGYT 45 (55)
T ss_dssp SCCCTTTTTTCCCEECSSEEECTTTCCC
T ss_pred cccCcCCCCceeEeccCCEEECCCCCCE
Confidence 5678888862231 01236677777765
No 184
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=33.64 E-value=16 Score=17.87 Aligned_cols=11 Identities=27% Similarity=0.733 Sum_probs=7.5
Q ss_pred ccccccCCceE
Q psy8222 79 RHHCRKCGSVV 89 (198)
Q Consensus 79 rhhCr~CG~vv 89 (198)
.+.|..||+.|
T Consensus 3 ~~~C~~C~~~f 13 (30)
T 2m0d_A 3 PYQCDYCGRSF 13 (30)
T ss_dssp CEECTTTCCEE
T ss_pred CccCCCCCccc
Confidence 45677777766
No 185
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.28 E-value=9 Score=23.65 Aligned_cols=9 Identities=33% Similarity=0.818 Sum_probs=5.1
Q ss_pred ccccCCccCC
Q psy8222 64 VCMHCKRTQF 73 (198)
Q Consensus 64 ~C~~C~~~~F 73 (198)
.|..|++ .|
T Consensus 20 ~C~~C~k-~f 28 (73)
T 2ctu_A 20 KCSKCGI-IF 28 (73)
T ss_dssp ECSSSCC-EE
T ss_pred eCCcccc-hh
Confidence 4556665 44
No 186
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=32.98 E-value=13 Score=18.10 Aligned_cols=10 Identities=20% Similarity=0.617 Sum_probs=5.8
Q ss_pred cccccCCceE
Q psy8222 80 HHCRKCGSVV 89 (198)
Q Consensus 80 hhCr~CG~vv 89 (198)
+.|..||+.|
T Consensus 3 ~~C~~C~~~f 12 (29)
T 1ard_A 3 FVCEVCTRAF 12 (29)
T ss_dssp CBCTTTCCBC
T ss_pred eECCCCCccc
Confidence 4566666554
No 187
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=32.93 E-value=14 Score=25.67 Aligned_cols=31 Identities=13% Similarity=0.240 Sum_probs=19.5
Q ss_pred CCccccCCcc-CCCccccccccccCCceEeCC
Q psy8222 62 AAVCMHCKRT-QFTVLSRRHHCRKCGSVVCAP 92 (198)
Q Consensus 62 ~~~C~~C~~~-~Fs~~~RrhhCr~CG~vvC~~ 92 (198)
.-.|..|++. .|..-.-..+|..||.+|-+.
T Consensus 27 ~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~agg 58 (83)
T 1vq8_Z 27 DHACPNCGEDRVDRQGTGIWQCSYCDYKFTGG 58 (83)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEECC
T ss_pred cCcCCCCCCcceeccCCCeEECCCCCCEecCC
Confidence 3468899871 122222357888888887664
No 188
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=32.73 E-value=1e+02 Score=22.90 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=30.6
Q ss_pred CcceEEEe------cCCeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 3 LRNGWLIQ------TSSKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 3 ~~n~f~i~------t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
.|+.|.|. +..|.+.+.|.|++|=.|-+..|+..+..
T Consensus 73 ~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~ 115 (121)
T 3ulb_A 73 VPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSA 115 (121)
T ss_dssp CTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHH
Confidence 46778775 23499999999999999999999887764
No 189
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=32.62 E-value=17 Score=17.79 Aligned_cols=10 Identities=20% Similarity=0.634 Sum_probs=6.8
Q ss_pred cccccCCceE
Q psy8222 80 HHCRKCGSVV 89 (198)
Q Consensus 80 hhCr~CG~vv 89 (198)
+.|..||..|
T Consensus 3 ~~C~~C~k~f 12 (29)
T 1rik_A 3 FACPECPKRF 12 (29)
T ss_dssp EECSSSSCEE
T ss_pred ccCCCCCchh
Confidence 5677777766
No 190
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.94 E-value=11 Score=26.04 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=21.3
Q ss_pred CccccCCccCCCccccccccccCCceEeCCCCCCee
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRF 98 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~ 98 (198)
-.|.+|.. .|. --.--..||++||..|...++
T Consensus 8 ~~CPI~~~-~~~---dPV~~~~cGh~f~r~cI~~~l 39 (94)
T 2yu4_A 8 FTCPITKE-EMK---KPVKNKVCGHTYEEDAIVRMI 39 (94)
T ss_dssp CBCTTTCS-BCS---SEEEESSSCCEEEHHHHHHHH
T ss_pred eECcCcCc-hhc---CCEEcCCCCCeecHHHHHHHH
Confidence 46888887 443 222223599999999976654
No 191
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=31.92 E-value=4.6 Score=26.68 Aligned_cols=41 Identities=24% Similarity=0.689 Sum_probs=27.0
Q ss_pred CccccCCccCCCccccccccccCCce-EeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSV-VCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~v-vC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
..|.+|.. .|.- .---.||++ ||..|.... +.|..|-..+.
T Consensus 25 ~~C~iC~~-~~~~----~~~~pCgH~~~C~~C~~~~-----------~~CP~Cr~~i~ 66 (74)
T 4ic3_A 25 KLCKICMD-RNIA----IVFVPCGHLVTCKQCAEAV-----------DKCPMCYTVIT 66 (74)
T ss_dssp TBCTTTSS-SBCC----EEEETTCCBCCCHHHHTTC-----------SBCTTTCCBCS
T ss_pred CCCCCCCC-CCCC----EEEcCCCChhHHHHhhhcC-----------ccCCCcCcCcc
Confidence 46999987 5532 122379999 999997553 56666655443
No 192
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.12 E-value=15 Score=25.08 Aligned_cols=10 Identities=20% Similarity=0.454 Sum_probs=8.4
Q ss_pred CccccCCccCC
Q psy8222 63 AVCMHCKRTQF 73 (198)
Q Consensus 63 ~~C~~C~~~~F 73 (198)
-.|..|++ .|
T Consensus 35 ~~C~~C~k-~F 44 (96)
T 2ctd_A 35 VSCPTCQA-VG 44 (96)
T ss_dssp EECTTTCS-CE
T ss_pred cCCCCCCC-Cc
Confidence 46999999 88
No 193
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=31.06 E-value=6.9 Score=24.73 Aligned_cols=48 Identities=23% Similarity=0.518 Sum_probs=27.5
Q ss_pred CccccCCccCCCcccccc---ccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhc
Q psy8222 63 AVCMHCKRTQFTVLSRRH---HCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLS 119 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~Rrh---hCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~ 119 (198)
..|.+|.. . .+.... .=..||++||..|....... ....|..|-..+.
T Consensus 4 ~~C~IC~~-~--~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~------~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 4 QGCPRCKT-T--KYRNPSLKLMVNVCGHTLCESCVDLLFVR------GAGNCPECGTPLR 54 (65)
T ss_dssp TCCSTTTT-H--HHHCSSCCEEECTTCCCEEHHHHHHHHHT------TSSSCTTTCCCCS
T ss_pred CcCCcCCC-C--ccCCCccCeecCCCCCHhHHHHHHHHHHc------CCCcCCCCCCccc
Confidence 46888875 1 121111 12479999999998665321 1345777755443
No 194
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=30.78 E-value=18 Score=17.49 Aligned_cols=10 Identities=40% Similarity=1.096 Sum_probs=6.2
Q ss_pred cccccCCceE
Q psy8222 80 HHCRKCGSVV 89 (198)
Q Consensus 80 hhCr~CG~vv 89 (198)
+.|..||..|
T Consensus 3 ~~C~~C~k~f 12 (29)
T 2m0f_A 3 LKCRECGKQF 12 (29)
T ss_dssp EECTTTSCEE
T ss_pred ccCCCCCCcc
Confidence 4566676665
No 195
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=30.53 E-value=18 Score=26.16 Aligned_cols=22 Identities=27% Similarity=0.624 Sum_probs=9.6
Q ss_pred ccccCCccCCCcccccc-ccccCC
Q psy8222 64 VCMHCKRTQFTVLSRRH-HCRKCG 86 (198)
Q Consensus 64 ~C~~C~~~~Fs~~~Rrh-hCr~CG 86 (198)
.|..|+. .|.+..... .|..||
T Consensus 75 ~C~~CG~-~~e~~~~~~~~CP~Cg 97 (119)
T 2kdx_A 75 ECKDCSH-VFKPNALDYGVCEKCH 97 (119)
T ss_dssp ECSSSSC-EECSCCSTTCCCSSSS
T ss_pred EcCCCCC-EEeCCCCCCCcCcccc
Confidence 3555554 454433333 344443
No 196
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=30.40 E-value=13 Score=32.95 Aligned_cols=47 Identities=17% Similarity=0.412 Sum_probs=32.2
Q ss_pred CccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
..|.+|.. .|. .-..-.||++||..|...+.. ...+.|..|-..+..
T Consensus 333 ~~C~ICle-~~~----~pv~lpCGH~FC~~Ci~~wl~------~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 333 QLCKICAE-NDK----DVKIEPCGHLMCTSCLTSWQE------SEGQGCPFCRCEIKG 379 (389)
T ss_dssp SBCTTTSS-SBC----CEEEETTCCEECHHHHHHHHH------HTCSBCTTTCCBCCE
T ss_pred CCCCccCc-CCC----CeEEeCCCChhhHHHHHHHHh------cCCCCCCCCCCccCC
Confidence 68999988 653 234468999999999855432 134578888665544
No 197
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=36.50 E-value=11 Score=18.27 Aligned_cols=10 Identities=30% Similarity=0.889 Sum_probs=6.4
Q ss_pred cccccCCceE
Q psy8222 80 HHCRKCGSVV 89 (198)
Q Consensus 80 hhCr~CG~vv 89 (198)
+.|..||+.|
T Consensus 3 ~~C~~C~k~f 12 (26)
T 2lvu_A 3 YVCERCGKRF 12 (26)
Confidence 5566677655
No 198
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=30.26 E-value=16 Score=17.99 Aligned_cols=11 Identities=18% Similarity=0.434 Sum_probs=7.2
Q ss_pred ccccccCCceE
Q psy8222 79 RHHCRKCGSVV 89 (198)
Q Consensus 79 rhhCr~CG~vv 89 (198)
.+.|..||+.|
T Consensus 3 ~~~C~~C~k~f 13 (27)
T 2kvg_A 3 PYRCPLCRAGC 13 (27)
T ss_dssp TEEETTTTEEE
T ss_pred CcCCCCCCccc
Confidence 35677777765
No 199
>1vq8_1 50S ribosomal protein L37E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.2 PDB: 1vq4_1* 1vq5_1* 1vq6_1* 1vq7_1* 1s72_1* 1vq9_1* 1vqk_1* 1vql_1* 1vqm_1* 1vqn_1* 1vqo_1* 1vqp_1* 1yhq_1* 1yi2_1* 1yij_1* 1yit_1* 1yj9_1* 1yjn_1* 1yjw_1* 2otj_1* ...
Probab=29.89 E-value=24 Score=22.94 Aligned_cols=7 Identities=57% Similarity=1.687 Sum_probs=3.3
Q ss_pred cccCCce
Q psy8222 82 CRKCGSV 88 (198)
Q Consensus 82 Cr~CG~v 88 (198)
||.||..
T Consensus 20 CrRCG~~ 26 (57)
T 1vq8_1 20 CRRCGEK 26 (57)
T ss_dssp CTTTCSE
T ss_pred ccccCCh
Confidence 4455443
No 200
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=29.86 E-value=19 Score=20.26 Aligned_cols=20 Identities=30% Similarity=0.879 Sum_probs=14.6
Q ss_pred cccCCccCCCccccccccccCCc
Q psy8222 65 CMHCKRTQFTVLSRRHHCRKCGS 87 (198)
Q Consensus 65 C~~C~~~~Fs~~~RrhhCr~CG~ 87 (198)
|..|+. .-|.+|..|..||.
T Consensus 8 C~~C~~---~Nfa~r~~C~~C~~ 27 (32)
T 2lk0_A 8 CNKCCL---NNFRKRLKCFRCGA 27 (32)
T ss_dssp CTTTCC---EEETTCCBCTTTCC
T ss_pred cCcCcC---CcChhcceecCCCC
Confidence 666764 44678899999885
No 201
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=29.64 E-value=28 Score=29.80 Aligned_cols=15 Identities=27% Similarity=0.505 Sum_probs=8.4
Q ss_pred cccCCC-CCccccCCc
Q psy8222 56 WIPDNE-AAVCMHCKR 70 (198)
Q Consensus 56 Wv~d~~-~~~C~~C~~ 70 (198)
|.|+-. ...|..|+.
T Consensus 14 ~~~~~~~~~~Cp~Cg~ 29 (345)
T 3k7a_M 14 RGPNLNIVLTCPECKV 29 (345)
T ss_dssp ---CCCCCCCCSTTCC
T ss_pred cCccccCCCcCcCCCC
Confidence 666654 567888876
No 202
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=29.64 E-value=31 Score=19.52 Aligned_cols=21 Identities=29% Similarity=0.822 Sum_probs=15.1
Q ss_pred ccccCCccCCCccccccccccCCc
Q psy8222 64 VCMHCKRTQFTVLSRRHHCRKCGS 87 (198)
Q Consensus 64 ~C~~C~~~~Fs~~~RrhhCr~CG~ 87 (198)
.|..|+. .-|.||..|..||.
T Consensus 8 ~C~~C~~---~Nfa~R~~C~~C~~ 28 (33)
T 2k1p_A 8 QCKTCSN---VNWARRSECNMCNT 28 (33)
T ss_dssp BCSSSCC---BCCTTCSBCSSSCC
T ss_pred ccCCCCC---ccccccccccccCC
Confidence 3777765 34668889998876
No 203
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=29.41 E-value=17 Score=25.98 Aligned_cols=56 Identities=18% Similarity=0.302 Sum_probs=36.6
Q ss_pred CccccCCCCCccccCCccCCCccc----------c----ccccccCCceEeCCCCCCeeecCCCCCCCeeeccchHHh
Q psy8222 54 AVWIPDNEAAVCMHCKRTQFTVLS----------R----RHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLTCYDV 117 (198)
Q Consensus 54 ~~Wv~d~~~~~C~~C~~~~Fs~~~----------R----rhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~ 117 (198)
+.|.-+.....|.+|.. .|...- . ...--.||++|+..|...++.. ...|..|-..
T Consensus 29 ~~w~~d~~~d~CaIC~~-~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-------~~~CP~Cr~~ 98 (106)
T 3dpl_R 29 ALWAWDIVVDNCAICRN-HIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-------RQVCPLDNRE 98 (106)
T ss_dssp EEEEESSCSCCCSSSCS-CTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT-------CSBCSSSCSB
T ss_pred eEeecCCCCCCCccCCh-hHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc-------CCcCcCCCCc
Confidence 56777777889999998 886420 0 0111469999999998776421 3457666443
No 204
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=29.22 E-value=19 Score=17.38 Aligned_cols=10 Identities=30% Similarity=0.929 Sum_probs=4.9
Q ss_pred cccccCCceE
Q psy8222 80 HHCRKCGSVV 89 (198)
Q Consensus 80 hhCr~CG~vv 89 (198)
+.|..||..|
T Consensus 3 ~~C~~C~~~f 12 (29)
T 2m0e_A 3 HKCPHCDKKF 12 (29)
T ss_dssp CCCSSCCCCC
T ss_pred CcCCCCCccc
Confidence 3455555544
No 205
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=29.21 E-value=27 Score=22.75 Aligned_cols=12 Identities=25% Similarity=0.617 Sum_probs=9.4
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|.+ .|..
T Consensus 9 ~~C~~C~~-~f~~ 20 (96)
T 2dmd_A 9 HKCEVCGK-CFSR 20 (96)
T ss_dssp CCBTTTTB-CCCC
T ss_pred eECCCCCC-ccCC
Confidence 46999999 8863
No 206
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.26 E-value=22 Score=18.62 Aligned_cols=12 Identities=25% Similarity=0.700 Sum_probs=8.2
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2els_A 8 KIFTCEYCNKVF 19 (36)
T ss_dssp CCEECTTTCCEE
T ss_pred CCEECCCCCcee
Confidence 456677777776
No 207
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=27.68 E-value=35 Score=22.49 Aligned_cols=26 Identities=27% Similarity=0.685 Sum_probs=19.1
Q ss_pred CCCccccCCccCCCccc-cccccccCCc
Q psy8222 61 EAAVCMHCKRTQFTVLS-RRHHCRKCGS 87 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~-RrhhCr~CG~ 87 (198)
..-.|..|+. .|.+-. -...|+.||.
T Consensus 20 v~Y~C~~Cg~-~~~l~~~~~iRC~~CG~ 46 (63)
T 3h0g_L 20 MIYLCADCGA-RNTIQAKEVIRCRECGH 46 (63)
T ss_dssp CCCBCSSSCC-BCCCCSSSCCCCSSSCC
T ss_pred eEEECCCCCC-eeecCCCCceECCCCCc
Confidence 4567999999 888653 3477887775
No 208
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=27.36 E-value=25 Score=22.14 Aligned_cols=12 Identities=33% Similarity=0.722 Sum_probs=8.6
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|.+ .|..
T Consensus 16 ~~C~~C~k-~f~~ 27 (77)
T 2ct1_A 16 YECYICHA-RFTQ 27 (77)
T ss_dssp EECTTTCC-EESC
T ss_pred eECCCcCc-hhCC
Confidence 46888888 7754
No 209
>2jox_A Churchill protein; zinc, transcription; NMR {Homo sapiens}
Probab=27.35 E-value=23 Score=25.64 Aligned_cols=27 Identities=26% Similarity=0.875 Sum_probs=17.8
Q ss_pred CccccCCccCCCcc-cc-------------ccccccCCceE
Q psy8222 63 AVCMHCKRTQFTVL-SR-------------RHHCRKCGSVV 89 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~-~R-------------rhhCr~CG~vv 89 (198)
..|..|++..|-++ +| .|-|.+|++|+
T Consensus 27 ~gC~~C~~~~~~~v~nk~~~eedgeEiity~H~C~nC~HvI 67 (106)
T 2jox_A 27 TGCAVCSKRDFMLITNKSLKEEDGEEIVTYDHLCKNCHHVI 67 (106)
T ss_dssp CCCSSSCCSSCEEEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred hhhhhcCCCceEEEeccccccCCCcEEEEEEEecCCCceEe
Confidence 46888876344333 22 48899998886
No 210
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=27.32 E-value=17 Score=24.48 Aligned_cols=10 Identities=40% Similarity=1.059 Sum_probs=5.4
Q ss_pred ccccccCCceE
Q psy8222 79 RHHCRKCGSVV 89 (198)
Q Consensus 79 rhhCr~CG~vv 89 (198)
.|.|. ||..+
T Consensus 21 T~~C~-CG~~~ 30 (71)
T 1gh9_A 21 TRKCV-CGRTV 30 (71)
T ss_dssp EEEET-TTEEE
T ss_pred EEECC-CCCee
Confidence 45565 65553
No 211
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=27.31 E-value=22 Score=30.48 Aligned_cols=61 Identities=18% Similarity=0.495 Sum_probs=38.5
Q ss_pred CCCccccCCccC-CCccc--------cccccccCCce------EeCCCCCCe-ee---cCC-----C-CCCCeeeccchH
Q psy8222 61 EAAVCMHCKRTQ-FTVLS--------RRHHCRKCGSV------VCAPCSNKR-FL---LPS-----Q-SAKPLRVCLTCY 115 (198)
Q Consensus 61 ~~~~C~~C~~~~-Fs~~~--------RrhhCr~CG~v------vC~~Cs~~~-~~---lp~-----~-~~~~~RVC~~C~ 115 (198)
....|.+|+..+ .++++ |..||-.||.- -|..|-+.+ .. +.. . ....+-+|..|.
T Consensus 181 ~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~~~l~y~~~e~~~~~~~~~~~r~e~C~~C~ 260 (309)
T 2fiy_A 181 SRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQ 260 (309)
T ss_dssp TCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCCSCCEEECCCC-CCCSTTCSEEEEEETTTT
T ss_pred cCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCCCCeeEEEecCccccCCCcceEEEEccccc
Confidence 357899999732 23333 46899999854 788886643 11 222 1 224578899998
Q ss_pred Hhhccc
Q psy8222 116 DVLSRD 121 (198)
Q Consensus 116 ~~l~~~ 121 (198)
..+...
T Consensus 261 ~YlK~~ 266 (309)
T 2fiy_A 261 GYLKQF 266 (309)
T ss_dssp EEEEEE
T ss_pred chHhhh
Confidence 766544
No 212
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=27.19 E-value=15 Score=21.34 Aligned_cols=24 Identities=25% Similarity=0.791 Sum_probs=15.1
Q ss_pred ccccCCccCCCccccc-----cccccCCce
Q psy8222 64 VCMHCKRTQFTVLSRR-----HHCRKCGSV 88 (198)
Q Consensus 64 ~C~~C~~~~Fs~~~Rr-----hhCr~CG~v 88 (198)
.|..|+. +-+.+.++ ..|..||..
T Consensus 2 lC~~C~~-peT~l~~~~~~~~l~C~aCG~~ 30 (36)
T 1k81_A 2 ICRECGK-PDTKIIKEGRVHLLKCMACGAI 30 (36)
T ss_dssp CCSSSCS-CEEEEEEETTEEEEEEETTTEE
T ss_pred CCcCCCC-CCcEEEEeCCcEEEEhhcCCCc
Confidence 4788888 65555432 557777764
No 213
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=26.93 E-value=33 Score=21.88 Aligned_cols=7 Identities=14% Similarity=0.387 Sum_probs=3.6
Q ss_pred ccccCCc
Q psy8222 64 VCMHCKR 70 (198)
Q Consensus 64 ~C~~C~~ 70 (198)
.|..|+.
T Consensus 13 ~Cp~C~~ 19 (58)
T 1dl6_A 13 TCPNHPD 19 (58)
T ss_dssp SBTTBSS
T ss_pred cCcCCCC
Confidence 4555543
No 214
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.69 E-value=24 Score=20.77 Aligned_cols=12 Identities=25% Similarity=0.827 Sum_probs=8.6
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|.+ .|..
T Consensus 13 ~~C~~C~k-~f~~ 24 (54)
T 2eps_A 13 YICQSCGK-GFSR 24 (54)
T ss_dssp EECSSSCC-EESS
T ss_pred eECCCCCc-ccCC
Confidence 46888888 7753
No 215
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=26.29 E-value=21 Score=21.98 Aligned_cols=12 Identities=25% Similarity=0.647 Sum_probs=9.9
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+++.|+.||.|+
T Consensus 3 ~~y~C~vCGyvy 14 (46)
T 6rxn_A 3 QKYVCNVCGYEY 14 (46)
T ss_dssp CCEEETTTCCEE
T ss_pred CEEECCCCCeEE
Confidence 467899999886
No 216
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=26.11 E-value=20 Score=17.45 Aligned_cols=10 Identities=20% Similarity=0.494 Sum_probs=5.8
Q ss_pred cccccCCceE
Q psy8222 80 HHCRKCGSVV 89 (198)
Q Consensus 80 hhCr~CG~vv 89 (198)
+.|..||..|
T Consensus 3 ~~C~~C~k~f 12 (30)
T 1klr_A 3 YQCQYCEFRS 12 (30)
T ss_dssp CCCSSSSCCC
T ss_pred ccCCCCCCcc
Confidence 4566666654
No 217
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=26.08 E-value=25 Score=18.01 Aligned_cols=12 Identities=17% Similarity=0.252 Sum_probs=8.2
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+.+.|..||+.|
T Consensus 6 k~~~C~~C~k~f 17 (35)
T 2elx_A 6 SGYVCALCLKKF 17 (35)
T ss_dssp CSEECSSSCCEE
T ss_pred CCeECCCCcchh
Confidence 446777777766
No 218
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=25.69 E-value=21 Score=17.49 Aligned_cols=10 Identities=20% Similarity=0.577 Sum_probs=5.9
Q ss_pred cccccCCceE
Q psy8222 80 HHCRKCGSVV 89 (198)
Q Consensus 80 hhCr~CG~vv 89 (198)
+.|..||..|
T Consensus 3 ~~C~~C~k~f 12 (30)
T 1paa_A 3 YACGLCNRAF 12 (30)
T ss_dssp SBCTTTCCBC
T ss_pred cCCcccCccc
Confidence 4566666654
No 219
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=25.47 E-value=21 Score=21.74 Aligned_cols=7 Identities=43% Similarity=1.151 Sum_probs=3.7
Q ss_pred ccccCCc
Q psy8222 64 VCMHCKR 70 (198)
Q Consensus 64 ~C~~C~~ 70 (198)
.|..|+.
T Consensus 7 ~CP~C~~ 13 (50)
T 1pft_A 7 VCPACES 13 (50)
T ss_dssp SCTTTSC
T ss_pred eCcCCCC
Confidence 4555543
No 220
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=25.05 E-value=24 Score=25.87 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=16.4
Q ss_pred eEeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 88 VVCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 88 vvC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
.+|..|.....++=..+....-+|..|...+..
T Consensus 60 ~~C~~C~t~~tp~WRr~~~g~~lCNaCgl~~~~ 92 (115)
T 4hc9_A 60 TSCANCQTTTTTLWRRNANGDPVCNACGLYYKL 92 (115)
T ss_dssp CCCTTTCCSCCSSCEECTTSCEECHHHHHHHHH
T ss_pred ccCCCcCCCCcceeEECCCCCCcchHHHHHHHH
Confidence 355555444333222233235678888765543
No 221
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=24.97 E-value=15 Score=29.75 Aligned_cols=28 Identities=18% Similarity=0.191 Sum_probs=0.0
Q ss_pred EEEEEeCChHHHHHHHHHHHHHHHHHHH
Q psy8222 15 SFAVHAATSTEKQEWMAHINKCIEDLLR 42 (198)
Q Consensus 15 Sf~v~A~s~~Ek~~Wi~~i~~~i~~ll~ 42 (198)
|+++.+.+++|++.|.+.|+.+|+++..
T Consensus 2 s~el~~~~E~e~~~k~~ki~~al~K~~e 29 (291)
T 3tca_A 2 SHELLSKEEEEAKAKADKIKLALEKLKE 29 (291)
T ss_dssp ----------------------------
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999987654
No 222
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=24.50 E-value=20 Score=25.43 Aligned_cols=8 Identities=50% Similarity=1.049 Sum_probs=3.5
Q ss_pred ccccCCcc
Q psy8222 64 VCMHCKRT 71 (198)
Q Consensus 64 ~C~~C~~~ 71 (198)
.|..|..|
T Consensus 17 ~C~~C~yt 24 (92)
T 2kwq_A 17 TCKTCKYT 24 (92)
T ss_dssp EETTTCCE
T ss_pred EccCCcce
Confidence 34444443
No 223
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.45 E-value=30 Score=22.39 Aligned_cols=44 Identities=16% Similarity=0.514 Sum_probs=29.0
Q ss_pred CCCccccCCccCCCccccccccccCCce-EeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 61 EAAVCMHCKRTQFTVLSRRHHCRKCGSV-VCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 61 ~~~~C~~C~~~~Fs~~~RrhhCr~CG~v-vC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
+...|.+|.. .+. ..---.||++ ||..|... .+.|..|-..+..
T Consensus 14 ~~~~C~IC~~-~~~----~~v~~pCgH~~~C~~C~~~-----------~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 14 NSKDCVVCQN-GTV----NWVLLPCRHTCLCDGCVKY-----------FQQCPMCRQFVQE 58 (68)
T ss_dssp CSSCCSSSSS-SCC----CCEETTTTBCCSCTTHHHH-----------CSSCTTTCCCCCC
T ss_pred CCCCCCCcCc-CCC----CEEEECCCChhhhHHHHhc-----------CCCCCCCCcchhc
Confidence 4568999987 442 2233579998 99999752 3567777655543
No 224
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.29 E-value=29 Score=18.06 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=7.9
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elv_A 8 LLYDCHICERKF 19 (36)
T ss_dssp CCEECSSSCCEE
T ss_pred CCeECCCCCCcc
Confidence 446677777765
No 225
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=24.27 E-value=33 Score=22.90 Aligned_cols=28 Identities=29% Similarity=0.583 Sum_probs=14.9
Q ss_pred ccccCCc--cCCCccccccccccCCceEeC
Q psy8222 64 VCMHCKR--TQFTVLSRRHHCRKCGSVVCA 91 (198)
Q Consensus 64 ~C~~C~~--~~Fs~~~RrhhCr~CG~vvC~ 91 (198)
.|..|.+ +-|+--..-..|..||.+.|.
T Consensus 9 KCp~C~niq~VFShA~tvV~C~~Cg~~L~~ 38 (66)
T 1qxf_A 9 KCPDCEHEQVIFDHPSTIVKCIICGRTVAE 38 (66)
T ss_dssp ECTTTCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred ECCCCCCceEEEecCceEEEcccCCCEEee
Confidence 3566654 124444445566666666654
No 226
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=24.10 E-value=18 Score=30.54 Aligned_cols=49 Identities=20% Similarity=0.310 Sum_probs=30.6
Q ss_pred CCccccCCccCCCccccccccccCCceEeCCCCCCeeecCCCCCCCeeeccc--hHHhhc
Q psy8222 62 AAVCMHCKRTQFTVLSRRHHCRKCGSVVCAPCSNKRFLLPSQSAKPLRVCLT--CYDVLS 119 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~~RrhhCr~CG~vvC~~Cs~~~~~lp~~~~~~~RVC~~--C~~~l~ 119 (198)
.-.|.+|.. .|. --.-...||++||..|...... . .....|.. |-..+.
T Consensus 181 el~CPIcl~-~f~---DPVts~~CGHsFcR~cI~~~~~--~---~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 181 ELTCPITCK-PYE---APLISRKCNHVFDRDGIQNYLQ--G---YTTRDCPQAACSQVVS 231 (267)
T ss_dssp CSBCTTTSS-BCS---SEEEESSSCCEEEHHHHHHHST--T---CSCEECSGGGCSCEEC
T ss_pred eeECcCccC-ccc---CCeeeCCCCCcccHHHHHHHHH--h---CCCCCCCcccccCcCc
Confidence 356888887 553 2233457999999999755432 1 13367877 766554
No 227
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=24.05 E-value=24 Score=22.25 Aligned_cols=13 Identities=23% Similarity=0.710 Sum_probs=10.0
Q ss_pred ccccccCCceEeC
Q psy8222 79 RHHCRKCGSVVCA 91 (198)
Q Consensus 79 rhhCr~CG~vvC~ 91 (198)
++.|+.||.|+=.
T Consensus 2 ~~~C~~CGyvYd~ 14 (52)
T 1yk4_A 2 KLSCKICGYIYDE 14 (52)
T ss_dssp EEEESSSSCEEET
T ss_pred cEEeCCCCeEECC
Confidence 5789999988643
No 228
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.96 E-value=24 Score=18.33 Aligned_cols=12 Identities=33% Similarity=0.916 Sum_probs=7.7
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+.+.|..||+.|
T Consensus 8 ~~~~C~~C~k~f 19 (36)
T 2elr_A 8 KTHLCDMCGKKF 19 (36)
T ss_dssp SSCBCTTTCCBC
T ss_pred CCeecCcCCCCc
Confidence 456677777654
No 229
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=23.73 E-value=11 Score=24.06 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=22.1
Q ss_pred CCCCCccccCCccCCCccccccccccCCce-EeCCCCCC
Q psy8222 59 DNEAAVCMHCKRTQFTVLSRRHHCRKCGSV-VCAPCSNK 96 (198)
Q Consensus 59 d~~~~~C~~C~~~~Fs~~~RrhhCr~CG~v-vC~~Cs~~ 96 (198)
..+...|.+|.. .+.-..--| ..||++ +|..|...
T Consensus 5 ~~~~~~C~IC~~-~~~~~~~~~--~pCgH~~~C~~C~~~ 40 (64)
T 2vje_A 5 LNAIEPCVICQG-RPKNGCIVH--GKTGHLMACFTCAKK 40 (64)
T ss_dssp CGGGSCCTTTSS-SCSCEEEEE--TTEEEEEECHHHHHH
T ss_pred CCCcCCCCcCCC-CCCCEEEEC--CCCCChhhHHHHHHH
Confidence 345568999987 553221101 269999 79999764
No 230
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=29.47 E-value=17 Score=17.91 Aligned_cols=10 Identities=30% Similarity=0.879 Sum_probs=6.3
Q ss_pred cccccCCceE
Q psy8222 80 HHCRKCGSVV 89 (198)
Q Consensus 80 hhCr~CG~vv 89 (198)
+.|..||+.|
T Consensus 3 ~~C~~C~k~f 12 (29)
T 2lvt_A 3 CQCVMCGKAF 12 (29)
Confidence 4566676665
No 231
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=23.12 E-value=31 Score=17.76 Aligned_cols=12 Identities=42% Similarity=0.703 Sum_probs=8.2
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+.+.|..||+.|
T Consensus 6 k~~~C~~C~k~f 17 (35)
T 1srk_A 6 RPFVCRICLSAF 17 (35)
T ss_dssp SCEECSSSCCEE
T ss_pred cCeeCCCCCccc
Confidence 446677777766
No 232
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.07 E-value=30 Score=17.87 Aligned_cols=12 Identities=17% Similarity=0.595 Sum_probs=8.3
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elt_A 8 KPYKCPQCSYAS 19 (36)
T ss_dssp CSEECSSSSCEE
T ss_pred CCCCCCCCCccc
Confidence 456777777766
No 233
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=22.90 E-value=37 Score=25.77 Aligned_cols=25 Identities=32% Similarity=0.688 Sum_probs=14.9
Q ss_pred CccccCCccCCCccccc-----cccccCCce
Q psy8222 63 AVCMHCKRTQFTVLSRR-----HHCRKCGSV 88 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~Rr-----hhCr~CG~v 88 (198)
-.|..|+. +-+.+.++ .+|..||..
T Consensus 104 VlC~~C~s-PdT~l~k~~r~~~l~C~ACGa~ 133 (139)
T 3cw2_K 104 VECSTCKS-LDTILKKEKKSWYIVCLACGAQ 133 (139)
T ss_dssp SSCCSSSS-SCCCSCSSCSTTTSSCCC----
T ss_pred eECCCCCC-cCcEEEEeCCeEEEEecCCCCC
Confidence 57888988 77766543 567777653
No 234
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.65 E-value=30 Score=19.63 Aligned_cols=12 Identities=25% Similarity=0.628 Sum_probs=8.6
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|++ .|..
T Consensus 13 ~~C~~C~k-~f~~ 24 (48)
T 2epr_A 13 VACEICGK-IFRD 24 (48)
T ss_dssp EEETTTTE-EESS
T ss_pred eeCCCCCc-ccCC
Confidence 46888888 7753
No 235
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.53 E-value=18 Score=23.57 Aligned_cols=42 Identities=24% Similarity=0.677 Sum_probs=27.4
Q ss_pred CccccCCccCCCccccccccccCCce-EeCCCCCCeeecCCCCCCCeeeccchHHhhcc
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGSV-VCAPCSNKRFLLPSQSAKPLRVCLTCYDVLSR 120 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~v-vC~~Cs~~~~~lp~~~~~~~RVC~~C~~~l~~ 120 (198)
..|.+|.. .|.- ..--.||++ ||..|... .+.|..|-..+..
T Consensus 26 ~~C~IC~~-~~~~----~~~~pCgH~~~C~~C~~~-----------~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 26 KLCKICMD-RNIA----IVFVPCGHLVTCKQCAEA-----------VDKCPMCYTVITF 68 (75)
T ss_dssp HSCSSSCS-SCCC----BCCSSSCCCCBCHHHHHH-----------CSBCTTTCCBCCC
T ss_pred CCCCcCCC-CCCC----EEEecCCCHHHHHHHhhC-----------CCCCccCCceecC
Confidence 46999987 5532 222479999 99999631 2567777655443
No 236
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.51 E-value=41 Score=22.72 Aligned_cols=8 Identities=0% Similarity=0.052 Sum_probs=4.2
Q ss_pred cccCCccCC
Q psy8222 65 CMHCKRTQF 73 (198)
Q Consensus 65 C~~C~~~~F 73 (198)
|..|++ .|
T Consensus 53 C~~C~~-~f 60 (115)
T 2dmi_A 53 DNNNPK-RW 60 (115)
T ss_dssp CCCCCS-CC
T ss_pred CCCCCc-cc
Confidence 555555 44
No 237
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=22.36 E-value=11 Score=23.65 Aligned_cols=21 Identities=33% Similarity=0.896 Sum_probs=14.1
Q ss_pred CccccCCccCCCccccccccccCCc
Q psy8222 63 AVCMHCKRTQFTVLSRRHHCRKCGS 87 (198)
Q Consensus 63 ~~C~~C~~~~Fs~~~RrhhCr~CG~ 87 (198)
-.|-.|.+ . +.+|.+|..|..
T Consensus 7 ~~Cd~C~~-~---ig~R~~C~~C~d 27 (52)
T 1tot_A 7 YTCNECKH-H---VETRWHCTVCED 27 (52)
T ss_dssp EEETTTTE-E---ESSEEEESSSSS
T ss_pred EECCCCCC-C---CcceEEcCCCCC
Confidence 45888887 4 356788877743
No 238
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.99 E-value=33 Score=17.99 Aligned_cols=12 Identities=25% Similarity=0.548 Sum_probs=8.5
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (37)
T 2elp_A 8 RAMKCPYCDFYF 19 (37)
T ss_dssp CCEECSSSSCEE
T ss_pred CCeECCCCChhh
Confidence 456777887776
No 239
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=21.96 E-value=2.1e+02 Score=20.14 Aligned_cols=46 Identities=9% Similarity=0.062 Sum_probs=31.1
Q ss_pred CcceEEEe-----cCCeEEEEEeCChHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy8222 3 LRNGWLIQ-----TSSKSFAVHAATSTEKQEWMAHINKCIEDLLRKSGKKP 48 (198)
Q Consensus 3 ~~n~f~i~-----t~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ll~~~g~~~ 48 (198)
|.++|.+. .|-=-+++.|.+.++-++.++.|.+.|..++...|..|
T Consensus 54 ~~~gwvlvRpSGTEP~irvy~Ea~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 104 (112)
T 1wjw_A 54 YTLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVSLLVFQLAGGIGERP 104 (112)
T ss_dssp SSSEEEEEECSSSSSSEEEEEEESSHHHHHHHHHHHHHHHHHHTCCCSSCC
T ss_pred cCCcEEEEEeCCCccEEEEEEEECCHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 34666544 23345677788888888888888888887765555444
No 240
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=21.91 E-value=54 Score=23.91 Aligned_cols=12 Identities=33% Similarity=0.587 Sum_probs=9.3
Q ss_pred CCeeeccchHHh
Q psy8222 106 KPLRVCLTCYDV 117 (198)
Q Consensus 106 ~~~RVC~~C~~~ 117 (198)
=.++||+.|...
T Consensus 24 F~~~VC~~Cr~~ 35 (111)
T 1d4u_A 24 FDLPTCDDCRDA 35 (111)
T ss_dssp TSCCCCTTTCSS
T ss_pred CCeeechhhccc
Confidence 468999999754
No 241
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=21.81 E-value=2.3e+02 Score=26.77 Aligned_cols=35 Identities=14% Similarity=0.406 Sum_probs=28.4
Q ss_pred ceEEEec-CCeEEEEEeCChHHHHHHHHHHHHHHHH
Q psy8222 5 NGWLIQT-SSKSFAVHAATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 5 n~f~i~t-~~KSf~v~A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
+.+.+.. ..|.|.|.+.+..+..+|...|+++...
T Consensus 618 ~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~~ 653 (689)
T 3v5w_A 618 KCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYRE 653 (689)
T ss_dssp EEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cceeeeecCCcEEEEECCChHHHHHHHHHHHHHHHH
Confidence 4556664 4499999999999999999999987754
No 242
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=21.65 E-value=39 Score=21.00 Aligned_cols=11 Identities=27% Similarity=0.775 Sum_probs=7.1
Q ss_pred CccccCCccCCC
Q psy8222 63 AVCMHCKRTQFT 74 (198)
Q Consensus 63 ~~C~~C~~~~Fs 74 (198)
-.|..|++ .|.
T Consensus 30 ~~C~~C~~-~f~ 40 (82)
T 2kmk_A 30 YPCQYCGK-RFH 40 (82)
T ss_dssp EECSSSCC-EES
T ss_pred eeCCcCCh-hhC
Confidence 35777777 664
No 243
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=21.65 E-value=39 Score=21.81 Aligned_cols=11 Identities=36% Similarity=0.851 Sum_probs=8.2
Q ss_pred ccccCCccCCCc
Q psy8222 64 VCMHCKRTQFTV 75 (198)
Q Consensus 64 ~C~~C~~~~Fs~ 75 (198)
.|..|++ .|..
T Consensus 5 ~C~~C~k-~f~~ 15 (88)
T 1llm_C 5 QCRICMR-NFSR 15 (88)
T ss_dssp ECTTTCC-EESC
T ss_pred cCCCCCC-ccCC
Confidence 5888888 7753
No 244
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=21.64 E-value=33 Score=24.92 Aligned_cols=10 Identities=40% Similarity=1.324 Sum_probs=6.5
Q ss_pred ccccCCccCCC
Q psy8222 64 VCMHCKRTQFT 74 (198)
Q Consensus 64 ~C~~C~~~~Fs 74 (198)
.|..|++ .|.
T Consensus 24 ~C~~C~k-~F~ 33 (133)
T 2lt7_A 24 ICIVCKR-SYV 33 (133)
T ss_dssp EETTTCC-EES
T ss_pred ECCCCCC-CcC
Confidence 4677777 664
No 245
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=21.57 E-value=45 Score=22.09 Aligned_cols=27 Identities=30% Similarity=0.664 Sum_probs=16.8
Q ss_pred CCccccCCccCCCcc------------ccccccccCCceE
Q psy8222 62 AAVCMHCKRTQFTVL------------SRRHHCRKCGSVV 89 (198)
Q Consensus 62 ~~~C~~C~~~~Fs~~------------~RrhhCr~CG~vv 89 (198)
.-.|..|++ .|... .+.+.|..||..|
T Consensus 17 ~~~C~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 55 (106)
T 2ee8_A 17 EFICKFCGR-HFTKSYNLLIHERTHTDERPYTCDICHKAF 55 (106)
T ss_dssp CCBCSSSCC-BCSSHHHHHHHHHHHCCSCCCBCSSSCCBC
T ss_pred CeECCCCCC-ccCCHHHHHHHHHHcCCCCCcCCCCccchh
Confidence 456888988 88642 1235566666654
No 246
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.55 E-value=34 Score=17.78 Aligned_cols=12 Identities=17% Similarity=0.567 Sum_probs=8.1
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elq_A 8 KPFKCSLCEYAT 19 (36)
T ss_dssp CSEECSSSSCEE
T ss_pred CCccCCCCCchh
Confidence 446677777766
No 247
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.35 E-value=24 Score=18.54 Aligned_cols=12 Identities=25% Similarity=0.581 Sum_probs=8.1
Q ss_pred cccccccCCceE
Q psy8222 78 RRHHCRKCGSVV 89 (198)
Q Consensus 78 RrhhCr~CG~vv 89 (198)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (37)
T 2elo_A 8 RSYSCPVCEKSF 19 (37)
T ss_dssp CCCEETTTTEEC
T ss_pred CCcCCCCCCCcc
Confidence 456677777765
No 248
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.16 E-value=43 Score=22.12 Aligned_cols=28 Identities=21% Similarity=0.666 Sum_probs=18.4
Q ss_pred ccccCCc--cCCCccccccccccCCceEeC
Q psy8222 64 VCMHCKR--TQFTVLSRRHHCRKCGSVVCA 91 (198)
Q Consensus 64 ~C~~C~~--~~Fs~~~RrhhCr~CG~vvC~ 91 (198)
.|..|.. +-|+--.....|..||.+.|.
T Consensus 17 kCp~C~~~q~VFSha~t~V~C~~Cgt~L~~ 46 (63)
T 3j20_W 17 KCIDCGNEQIVFSHPATKVRCLICGATLVE 46 (63)
T ss_dssp ECSSSCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred ECCCCCCeeEEEecCCeEEEccCcCCEEec
Confidence 5777776 135555556777788877775
No 249
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=21.15 E-value=1.5e+02 Score=19.94 Aligned_cols=29 Identities=17% Similarity=0.487 Sum_probs=23.6
Q ss_pred cCCeEEEEE---eCChHHHHHHHHHHHHHHHH
Q psy8222 11 TSSKSFAVH---AATSTEKQEWMAHINKCIED 39 (198)
Q Consensus 11 t~~KSf~v~---A~s~~Ek~~Wi~~i~~~i~~ 39 (198)
+..||+.|. .-+.+.+..|+..|+...+.
T Consensus 15 g~~KsL~Lf~P~gLt~~Q~~QW~~TIeav~qS 46 (75)
T 2fqm_A 15 EHGKTLRLTLPEGLSGEQKSQWMLTIKAVVQS 46 (75)
T ss_dssp TTEEEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCccHHHHHHHHHHHHHHHhh
Confidence 566888877 46899999999999887764
No 250
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=20.65 E-value=42 Score=21.37 Aligned_cols=10 Identities=40% Similarity=1.002 Sum_probs=6.4
Q ss_pred ccccCCccCCC
Q psy8222 64 VCMHCKRTQFT 74 (198)
Q Consensus 64 ~C~~C~~~~Fs 74 (198)
.|..|++ .|.
T Consensus 36 ~C~~C~~-~f~ 45 (90)
T 1a1h_A 36 QCRICMR-NFS 45 (90)
T ss_dssp ECTTTCC-EES
T ss_pred cCCCCCc-ccC
Confidence 5666776 664
No 251
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=20.64 E-value=35 Score=19.61 Aligned_cols=13 Identities=23% Similarity=0.519 Sum_probs=9.3
Q ss_pred cccccccCCceEe
Q psy8222 78 RRHHCRKCGSVVC 90 (198)
Q Consensus 78 RrhhCr~CG~vvC 90 (198)
|.+.|..||+.|-
T Consensus 6 kp~~C~~C~k~F~ 18 (48)
T 3iuf_A 6 KPYACDICGKRYK 18 (48)
T ss_dssp SCEECTTTCCEES
T ss_pred cCEECCCcCcccC
Confidence 4577888888773
No 252
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=20.64 E-value=30 Score=17.98 Aligned_cols=10 Identities=20% Similarity=0.634 Sum_probs=5.9
Q ss_pred cccccCCceE
Q psy8222 80 HHCRKCGSVV 89 (198)
Q Consensus 80 hhCr~CG~vv 89 (198)
+.|..||+.|
T Consensus 3 ~~C~~C~k~F 12 (33)
T 1rim_A 3 FACPECPKRF 12 (33)
T ss_dssp CCCSSSCCCC
T ss_pred ccCCCCCchh
Confidence 4566666654
No 253
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=20.41 E-value=31 Score=21.95 Aligned_cols=14 Identities=29% Similarity=0.707 Sum_probs=10.6
Q ss_pred cccccccCCceEeC
Q psy8222 78 RRHHCRKCGSVVCA 91 (198)
Q Consensus 78 RrhhCr~CG~vvC~ 91 (198)
.++.|+.||.|+=.
T Consensus 2 ~~y~C~~CGyvYd~ 15 (55)
T 2v3b_B 2 RKWQCVVCGFIYDE 15 (55)
T ss_dssp CEEEETTTCCEEET
T ss_pred CcEEeCCCCeEECC
Confidence 36789999998743
No 254
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.13 E-value=40 Score=18.62 Aligned_cols=12 Identities=25% Similarity=0.520 Sum_probs=8.5
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|.+ .|..
T Consensus 11 ~~C~~C~k-~f~~ 22 (45)
T 2epq_A 11 YSCPVCGL-RFKR 22 (45)
T ss_dssp SEETTTTE-ECSC
T ss_pred CcCCCCCc-ccCC
Confidence 46888888 7754
No 255
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.07 E-value=45 Score=20.99 Aligned_cols=12 Identities=33% Similarity=0.944 Sum_probs=8.9
Q ss_pred CccccCCccCCCc
Q psy8222 63 AVCMHCKRTQFTV 75 (198)
Q Consensus 63 ~~C~~C~~~~Fs~ 75 (198)
-.|..|.+ .|..
T Consensus 16 ~~C~~C~~-~f~~ 27 (86)
T 1x6h_A 16 YACSHCDK-TFRQ 27 (86)
T ss_dssp EECSSSSC-EESS
T ss_pred CcCCCCCC-ccCC
Confidence 46888888 7754
Done!