Query psy8225
Match_columns 479
No_of_seqs 205 out of 1906
Neff 10.4
Searched_HMMs 46136
Date Fri Aug 16 21:53:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8225.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8225hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1179|consensus 100.0 1.6E-63 3.5E-68 464.4 36.6 432 42-478 72-513 (649)
2 KOG1176|consensus 100.0 1.4E-62 3.1E-67 481.1 37.6 384 64-479 34-434 (537)
3 KOG1177|consensus 100.0 3.8E-62 8.2E-67 446.1 29.5 402 47-479 50-487 (596)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 1.5E-60 3.2E-65 483.0 40.5 400 45-479 9-427 (534)
5 COG0365 Acs Acyl-coenzyme A sy 100.0 4.4E-61 9.6E-66 467.9 35.2 389 47-479 9-422 (528)
6 PTZ00342 acyl-CoA synthetase; 100.0 8.9E-60 1.9E-64 487.7 37.5 403 45-479 59-596 (746)
7 PLN02614 long-chain acyl-CoA s 100.0 4.2E-59 9.1E-64 483.8 36.6 403 47-479 45-522 (666)
8 PLN02736 long-chain acyl-CoA s 100.0 1.1E-58 2.4E-63 481.9 39.5 407 45-479 42-513 (651)
9 COG1022 FAA1 Long-chain acyl-C 100.0 4.8E-59 1E-63 459.7 33.5 388 47-479 16-475 (613)
10 PLN02861 long-chain-fatty-acid 100.0 1.6E-58 3.4E-63 479.9 37.1 401 47-479 43-519 (660)
11 KOG1256|consensus 100.0 5.2E-59 1.1E-63 452.3 31.2 405 44-478 72-552 (691)
12 PLN02387 long-chain-fatty-acid 100.0 4.6E-57 1E-61 470.8 36.8 409 47-479 58-561 (696)
13 PRK06334 long chain fatty acid 100.0 7.2E-57 1.6E-61 458.4 36.4 399 45-479 17-436 (539)
14 PRK08279 long-chain-acyl-CoA s 100.0 4.7E-56 1E-60 459.3 43.0 425 45-479 35-465 (600)
15 PF00501 AMP-binding: AMP-bind 100.0 2.1E-57 4.6E-62 449.6 30.4 388 53-479 1-414 (417)
16 PRK07788 acyl-CoA synthetase; 100.0 2.5E-56 5.3E-61 457.0 38.9 393 47-479 49-453 (549)
17 TIGR02316 propion_prpE propion 100.0 4.2E-56 9.1E-61 461.0 40.8 411 44-479 49-498 (628)
18 PLN02654 acetate-CoA ligase 100.0 4.7E-56 1E-60 461.8 40.7 407 47-479 88-539 (666)
19 PRK07529 AMP-binding domain pr 100.0 7.9E-56 1.7E-60 458.6 40.7 408 43-479 21-471 (632)
20 PTZ00237 acetyl-CoA synthetase 100.0 9.4E-56 2E-60 458.1 39.4 413 40-479 52-518 (647)
21 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.9E-55 4E-60 456.7 41.2 407 46-479 56-501 (625)
22 PLN02860 o-succinylbenzoate-Co 100.0 8.3E-56 1.8E-60 453.8 37.8 401 44-479 4-440 (563)
23 PTZ00216 acyl-CoA synthetase; 100.0 3.9E-56 8.4E-61 465.0 35.7 403 46-479 68-562 (700)
24 PRK08314 long-chain-fatty-acid 100.0 8.5E-55 1.8E-59 445.8 41.0 406 46-479 9-442 (546)
25 PRK00174 acetyl-CoA synthetase 100.0 1E-54 2.3E-59 451.8 41.6 405 47-479 67-509 (637)
26 PLN02430 long-chain-fatty-acid 100.0 4.6E-55 1E-59 453.1 38.4 404 45-479 40-519 (660)
27 PRK13295 cyclohexanecarboxylat 100.0 1.3E-54 2.9E-59 443.8 40.3 395 46-479 23-445 (547)
28 PLN02246 4-coumarate--CoA liga 100.0 1.5E-54 3.2E-59 442.6 40.2 396 47-479 23-438 (537)
29 PRK04319 acetyl-CoA synthetase 100.0 2.1E-54 4.6E-59 444.3 38.3 398 46-479 42-458 (570)
30 PRK08180 feruloyl-CoA synthase 100.0 2.4E-54 5.3E-59 446.6 38.6 393 45-478 37-469 (614)
31 PRK10524 prpE propionyl-CoA sy 100.0 4.4E-54 9.5E-59 446.8 39.8 409 46-479 52-499 (629)
32 PLN02574 4-coumarate--CoA liga 100.0 2.4E-54 5.2E-59 442.7 36.8 393 50-479 44-456 (560)
33 PRK05605 long-chain-fatty-acid 100.0 2.2E-54 4.7E-59 444.9 36.4 433 19-479 4-471 (573)
34 PRK06155 crotonobetaine/carnit 100.0 2.1E-53 4.6E-58 433.8 42.5 400 45-479 19-426 (542)
35 PRK13382 acyl-CoA synthetase; 100.0 8.5E-54 1.8E-58 436.4 39.5 388 46-479 42-442 (537)
36 PRK07656 long-chain-fatty-acid 100.0 2E-53 4.4E-58 432.6 41.3 402 46-479 4-418 (513)
37 PRK06839 acyl-CoA synthetase; 100.0 4E-53 8.6E-58 428.6 41.3 382 49-479 4-397 (496)
38 COG1021 EntE Peptide arylation 100.0 1.5E-54 3.3E-59 387.5 26.5 414 30-479 11-440 (542)
39 PRK09274 peptide synthase; Pro 100.0 1.8E-53 3.8E-58 436.3 37.5 399 47-479 6-446 (552)
40 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 8.9E-53 1.9E-57 428.6 42.0 398 45-479 21-434 (527)
41 PRK07638 acyl-CoA synthetase; 100.0 2.5E-53 5.4E-58 428.7 37.4 377 48-479 2-387 (487)
42 PLN02330 4-coumarate--CoA liga 100.0 2.2E-53 4.7E-58 434.7 37.0 396 47-479 28-443 (546)
43 PRK08316 acyl-CoA synthetase; 100.0 4.3E-53 9.4E-58 431.3 38.7 404 43-479 7-421 (523)
44 PRK05852 acyl-CoA synthetase; 100.0 4.6E-53 9.9E-58 431.4 38.0 403 43-479 12-434 (534)
45 PRK08008 caiC putative crotono 100.0 1.1E-52 2.5E-57 427.2 40.3 402 47-479 7-424 (517)
46 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 9.7E-53 2.1E-57 429.4 39.9 394 47-479 22-443 (538)
47 PRK05677 long-chain-fatty-acid 100.0 6.6E-53 1.4E-57 432.5 38.6 402 47-479 24-459 (562)
48 PRK05857 acyl-CoA synthetase; 100.0 3.3E-53 7.2E-58 432.3 36.1 397 45-479 12-428 (540)
49 PLN03052 acetate--CoA ligase; 100.0 1.2E-52 2.7E-57 437.4 40.5 409 47-479 175-615 (728)
50 PRK12582 acyl-CoA synthetase; 100.0 2.6E-53 5.7E-58 439.7 35.1 394 45-479 47-482 (624)
51 PLN03102 acyl-activating enzym 100.0 1.4E-52 3E-57 430.6 39.6 407 45-479 12-446 (579)
52 PRK13388 acyl-CoA synthetase; 100.0 2.5E-52 5.4E-57 425.7 40.4 394 47-479 3-406 (540)
53 PRK07514 malonyl-CoA synthase; 100.0 2.4E-52 5.2E-57 423.7 39.4 391 47-479 3-403 (504)
54 PRK07769 long-chain-fatty-acid 100.0 8.8E-53 1.9E-57 436.9 36.9 389 47-479 21-489 (631)
55 PRK07867 acyl-CoA synthetase; 100.0 4.4E-52 9.5E-57 422.6 41.0 383 47-479 5-407 (529)
56 PRK08315 AMP-binding domain pr 100.0 2E-52 4.3E-57 429.5 38.6 403 45-479 14-453 (559)
57 PRK06087 short chain acyl-CoA 100.0 5.6E-52 1.2E-56 424.8 41.6 399 44-479 20-436 (547)
58 PRK06187 long-chain-fatty-acid 100.0 6.1E-52 1.3E-56 422.7 41.2 400 45-479 4-421 (521)
59 PRK06178 acyl-CoA synthetase; 100.0 3.7E-52 7.9E-57 427.8 39.8 405 47-479 33-468 (567)
60 PRK03640 O-succinylbenzoic aci 100.0 3.9E-52 8.5E-57 419.9 39.0 374 47-479 2-386 (483)
61 TIGR03098 ligase_PEP_1 acyl-Co 100.0 7.5E-52 1.6E-56 421.3 41.4 403 48-479 1-420 (515)
62 PRK06060 acyl-CoA synthetase; 100.0 8.7E-53 1.9E-57 441.9 35.0 375 48-479 5-391 (705)
63 PRK08043 bifunctional acyl-[ac 100.0 5.4E-53 1.2E-57 443.7 32.7 397 46-479 203-617 (718)
64 PRK06145 acyl-CoA synthetase; 100.0 1.1E-51 2.3E-56 418.1 40.3 386 48-479 3-399 (497)
65 PRK12583 acyl-CoA synthetase; 100.0 1.1E-51 2.4E-56 424.1 40.5 400 47-479 18-454 (558)
66 PRK07470 acyl-CoA synthetase; 100.0 5.9E-52 1.3E-56 422.9 38.0 395 44-479 4-420 (528)
67 PRK12476 putative fatty-acid-- 100.0 2.9E-52 6.4E-57 431.3 35.4 390 47-479 34-501 (612)
68 KOG1180|consensus 100.0 3.6E-53 7.8E-58 393.6 25.4 409 46-479 40-541 (678)
69 PRK08633 2-acyl-glycerophospho 100.0 2.8E-52 6E-57 462.7 36.9 404 47-479 615-1045(1146)
70 PRK07786 long-chain-fatty-acid 100.0 1.4E-51 3E-56 421.1 38.8 394 47-479 17-425 (542)
71 PRK06188 acyl-CoA synthetase; 100.0 1.7E-51 3.6E-56 419.2 39.3 393 45-479 10-419 (524)
72 PRK03584 acetoacetyl-CoA synth 100.0 1.7E-51 3.7E-56 428.9 39.9 394 59-479 96-524 (655)
73 PRK06164 acyl-CoA synthetase; 100.0 1.7E-51 3.8E-56 420.6 38.9 403 46-479 9-432 (540)
74 PRK12492 long-chain-fatty-acid 100.0 1.5E-51 3.2E-56 422.5 38.4 403 47-479 24-467 (562)
75 PRK10946 entE enterobactin syn 100.0 1.6E-51 3.5E-56 419.8 38.5 393 47-479 25-435 (536)
76 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2.1E-51 4.5E-56 426.4 39.1 394 59-479 96-525 (652)
77 PRK07059 Long-chain-fatty-acid 100.0 4.5E-51 9.8E-56 418.8 40.0 405 45-479 21-461 (557)
78 PRK07868 acyl-CoA synthetase; 100.0 5.7E-51 1.2E-55 438.3 42.6 411 45-479 445-862 (994)
79 TIGR02262 benz_CoA_lig benzoat 100.0 6.6E-51 1.4E-55 413.2 40.7 394 47-479 4-410 (508)
80 PRK07008 long-chain-fatty-acid 100.0 4.5E-51 9.7E-56 416.8 39.2 400 45-479 8-435 (539)
81 TIGR03205 pimA dicarboxylate-- 100.0 1.1E-50 2.4E-55 414.5 40.7 404 45-479 19-447 (541)
82 PRK09088 acyl-CoA synthetase; 100.0 3.4E-51 7.4E-56 413.4 36.3 370 54-479 2-387 (488)
83 PLN02479 acetate-CoA ligase 100.0 3.7E-51 8E-56 419.7 36.8 415 33-479 6-456 (567)
84 PRK10252 entF enterobactin syn 100.0 3E-51 6.5E-56 458.9 36.9 390 47-479 458-863 (1296)
85 TIGR03443 alpha_am_amid L-amin 100.0 4.1E-51 9E-56 459.3 37.6 411 47-479 236-704 (1389)
86 PRK05620 long-chain-fatty-acid 100.0 1.8E-50 4E-55 415.6 38.7 409 44-479 7-456 (576)
87 PRK06710 long-chain-fatty-acid 100.0 1.3E-50 2.8E-55 416.0 37.1 402 47-479 24-457 (563)
88 PRK08751 putative long-chain f 100.0 2.6E-50 5.7E-55 413.6 37.9 404 46-479 24-463 (560)
89 PRK06018 putative acyl-CoA syn 100.0 3.9E-50 8.4E-55 410.4 38.2 404 42-479 5-436 (542)
90 PRK12467 peptide synthase; Pro 100.0 3.7E-51 7.9E-56 488.4 35.5 385 47-479 3095-3497(3956)
91 PRK13383 acyl-CoA synthetase; 100.0 3.6E-50 7.8E-55 408.3 37.2 376 45-479 33-422 (516)
92 PRK05851 long-chain-fatty-acid 100.0 7.8E-51 1.7E-55 413.5 31.8 371 49-479 4-421 (525)
93 PRK08162 acyl-CoA synthetase; 100.0 1.3E-49 2.8E-54 407.3 39.7 404 45-479 16-442 (545)
94 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.3E-49 2.9E-54 403.4 35.2 381 49-479 2-399 (502)
95 PRK12316 peptide synthase; Pro 100.0 4.9E-50 1.1E-54 485.9 37.2 388 46-479 510-912 (5163)
96 PRK05850 acyl-CoA synthetase; 100.0 1.9E-49 4.2E-54 408.6 36.0 393 48-479 2-462 (578)
97 PRK08974 long-chain-fatty-acid 100.0 7.7E-49 1.7E-53 402.6 40.0 402 47-479 23-458 (560)
98 PRK12467 peptide synthase; Pro 100.0 1.5E-49 3.3E-54 474.6 37.4 388 47-479 1574-1980(3956)
99 PRK12316 peptide synthase; Pro 100.0 1.8E-49 3.9E-54 480.9 36.9 392 47-479 2003-2407(5163)
100 PRK07787 acyl-CoA synthetase; 100.0 9E-49 2E-53 393.5 35.5 356 57-479 10-377 (471)
101 PRK13390 acyl-CoA synthetase; 100.0 1.6E-48 3.4E-53 395.2 37.3 381 55-479 5-405 (501)
102 PRK07798 acyl-CoA synthetase; 100.0 5.3E-48 1.1E-52 394.8 41.3 402 48-479 4-434 (533)
103 PRK04813 D-alanine--poly(phosp 100.0 2.8E-48 6E-53 394.0 35.3 382 48-479 3-401 (503)
104 PRK05691 peptide synthase; Val 100.0 1E-48 2.2E-53 471.4 37.2 394 47-479 3720-4128(4334)
105 TIGR01733 AA-adenyl-dom amino 100.0 2.1E-48 4.6E-53 384.3 32.9 363 71-479 1-381 (408)
106 PRK09192 acyl-CoA synthetase; 100.0 1.8E-48 3.8E-53 400.9 33.1 384 47-479 21-464 (579)
107 PRK06814 acylglycerophosphoeth 100.0 2.8E-48 6.2E-53 429.1 36.8 392 46-479 630-1036(1140)
108 PRK05691 peptide synthase; Val 100.0 1.6E-48 3.5E-53 469.7 37.2 386 46-479 1130-1531(4334)
109 KOG1175|consensus 100.0 4.7E-48 1E-52 377.2 30.0 397 49-479 66-501 (626)
110 PRK13391 acyl-CoA synthetase; 100.0 4.9E-47 1.1E-51 385.1 38.6 385 54-479 4-408 (511)
111 PRK08276 long-chain-fatty-acid 100.0 8.3E-47 1.8E-51 382.8 35.9 368 70-479 12-395 (502)
112 PRK07768 long-chain-fatty-acid 100.0 4.2E-47 9.1E-52 388.6 33.7 380 48-479 3-440 (545)
113 PRK12406 long-chain-fatty-acid 100.0 2.2E-46 4.7E-51 380.3 36.2 372 70-479 12-405 (509)
114 PRK07445 O-succinylbenzoic aci 100.0 4E-47 8.6E-52 377.7 29.6 322 70-479 20-350 (452)
115 PLN03051 acyl-activating enzym 100.0 6.1E-47 1.3E-51 382.4 31.4 355 100-479 1-383 (499)
116 PRK09029 O-succinylbenzoic aci 100.0 5.7E-46 1.2E-50 372.0 33.2 341 54-479 10-357 (458)
117 TIGR01923 menE O-succinylbenzo 100.0 9.4E-46 2E-50 368.5 32.8 339 71-479 1-346 (436)
118 PRK08308 acyl-CoA synthetase; 100.0 2.7E-44 5.8E-49 355.0 33.2 305 70-479 9-317 (414)
119 PTZ00297 pantothenate kinase; 100.0 4.8E-39 1E-43 346.2 34.5 371 47-479 427-862 (1452)
120 COG1020 EntF Non-ribosomal pep 100.0 2E-34 4.3E-39 300.7 33.4 384 47-479 227-622 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 7.7E-30 1.7E-34 247.0 22.8 222 204-479 31-259 (358)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 1.4E-27 3.1E-32 230.2 19.9 204 208-479 95-301 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 3.1E-27 6.8E-32 233.4 20.0 234 206-479 73-321 (422)
124 TIGR03089 conserved hypothetic 100.0 1.2E-26 2.6E-31 207.2 21.0 212 53-299 2-227 (227)
125 KOG3628|consensus 99.9 4.5E-24 9.8E-29 213.1 28.6 408 47-478 770-1254(1363)
126 TIGR03335 F390_ftsA coenzyme F 99.9 4.4E-23 9.6E-28 204.0 19.3 235 205-479 83-333 (445)
127 COG1541 PaaK Coenzyme F390 syn 99.8 7E-19 1.5E-23 165.6 17.1 235 204-479 86-337 (438)
128 KOG1178|consensus 99.8 1.1E-18 2.3E-23 180.3 16.2 299 47-364 36-370 (1032)
129 KOG3628|consensus 99.7 3.1E-15 6.8E-20 150.7 17.2 387 49-478 96-595 (1363)
130 TIGR02304 aden_form_hyp probab 99.4 5.5E-12 1.2E-16 122.4 16.0 145 210-365 101-254 (430)
131 PF04443 LuxE: Acyl-protein sy 99.2 1.8E-09 4E-14 102.5 18.5 228 205-477 86-350 (365)
132 PRK09188 serine/threonine prot 97.7 3E-05 6.4E-10 74.0 3.3 26 451-476 207-233 (365)
133 PF03321 GH3: GH3 auxin-respon 97.3 0.00083 1.8E-08 68.0 8.2 119 322-477 266-397 (528)
134 PLN02249 indole-3-acetic acid- 95.8 0.097 2.1E-06 53.6 11.4 127 322-478 301-437 (597)
135 PLN02247 indole-3-acetic acid- 95.5 0.65 1.4E-05 47.4 15.9 28 207-234 88-116 (606)
136 PLN02620 indole-3-acetic acid- 94.9 0.47 1E-05 48.3 12.8 29 207-235 100-129 (612)
137 COG1541 PaaK Coenzyme F390 syn 94.4 0.25 5.5E-06 47.9 9.2 88 70-158 110-200 (438)
138 KOG1177|consensus 86.9 9.6 0.00021 37.5 11.1 93 59-154 231-338 (596)
139 TIGR02155 PA_CoA_ligase phenyl 86.3 5.4 0.00012 39.4 9.9 85 70-155 95-182 (422)
140 TIGR03335 F390_ftsA coenzyme F 85.0 7.5 0.00016 38.8 10.2 79 70-151 106-187 (445)
141 KOG1179|consensus 82.5 1.6 3.5E-05 43.4 4.0 50 10-59 543-593 (649)
142 PF00501 AMP-binding: AMP-bind 78.5 24 0.00052 34.6 11.2 93 60-156 153-263 (417)
143 PRK07656 long-chain-fatty-acid 78.4 19 0.00041 36.5 10.6 93 60-156 164-271 (513)
144 TIGR03089 conserved hypothetic 77.8 10 0.00023 33.8 7.5 54 86-141 171-226 (227)
145 PRK06187 long-chain-fatty-acid 77.2 23 0.0005 35.8 10.9 83 70-156 187-271 (521)
146 PLN03051 acyl-activating enzym 74.9 29 0.00063 35.1 10.8 93 61-156 118-224 (499)
147 TIGR01923 menE O-succinylbenzo 74.9 31 0.00067 34.0 10.9 94 70-169 131-226 (436)
148 PRK08315 AMP-binding domain pr 73.5 35 0.00076 35.0 11.2 91 60-153 197-302 (559)
149 PRK06334 long chain fatty acid 69.9 45 0.00097 34.2 10.9 94 60-156 181-289 (539)
150 TIGR03590 PseG pseudaminic aci 69.4 34 0.00073 31.7 9.0 90 76-172 18-112 (279)
151 PRK04319 acetyl-CoA synthetase 68.3 49 0.0011 34.2 10.9 94 60-156 203-311 (570)
152 PRK12583 acyl-CoA synthetase; 68.0 56 0.0012 33.5 11.3 90 60-152 199-303 (558)
153 KOG0023|consensus 67.3 31 0.00067 32.3 7.8 75 84-161 173-247 (360)
154 TIGR01733 AA-adenyl-dom amino 67.3 60 0.0013 31.6 10.9 94 60-156 118-227 (408)
155 PRK08308 acyl-CoA synthetase; 66.5 95 0.0021 30.4 12.1 94 60-157 99-207 (414)
156 PLN02565 cysteine synthase 66.1 1E+02 0.0022 29.2 11.6 66 83-148 55-121 (322)
157 TIGR03098 ligase_PEP_1 acyl-Co 64.0 72 0.0016 32.2 11.1 83 70-156 181-265 (515)
158 PRK06164 acyl-CoA synthetase; 62.5 69 0.0015 32.7 10.6 93 60-156 179-285 (540)
159 PLN02556 cysteine synthase/L-3 61.3 1E+02 0.0022 29.9 10.7 62 87-148 103-165 (368)
160 PRK07638 acyl-CoA synthetase; 61.2 1.3E+02 0.0028 30.2 12.2 84 70-157 163-248 (487)
161 PTZ00237 acetyl-CoA synthetase 59.5 1.1E+02 0.0025 32.2 11.8 78 226-305 91-172 (647)
162 COG0031 CysK Cysteine synthase 58.7 90 0.0019 29.1 9.3 61 87-148 55-116 (300)
163 PRK02261 methylaspartate mutas 58.3 81 0.0018 25.5 8.1 105 246-351 1-117 (137)
164 PLN02860 o-succinylbenzoate-Co 58.0 81 0.0018 32.5 10.3 93 60-156 170-276 (563)
165 PRK08043 bifunctional acyl-[ac 57.2 1.3E+02 0.0028 32.3 11.8 92 60-154 363-469 (718)
166 PRK11761 cysM cysteine synthas 57.0 93 0.002 29.1 9.5 67 81-148 50-117 (296)
167 PRK06188 acyl-CoA synthetase; 56.2 1.1E+02 0.0023 31.2 10.7 82 70-155 188-270 (524)
168 PLN03052 acetate--CoA ligase; 56.2 1.4E+02 0.0031 32.0 11.9 97 207-306 189-289 (728)
169 COG1064 AdhP Zn-dependent alco 56.2 50 0.0011 31.4 7.4 61 84-148 158-218 (339)
170 COG0318 CaiC Acyl-CoA syntheta 55.7 1.4E+02 0.0031 30.5 11.5 97 60-157 169-281 (534)
171 PLN02654 acetate-CoA ligase 54.3 1.6E+02 0.0036 31.1 11.9 79 226-306 119-201 (666)
172 cd01445 TST_Repeats Thiosulfat 54.1 44 0.00095 27.1 6.0 44 78-121 80-126 (138)
173 TIGR02262 benz_CoA_lig benzoat 53.7 1.3E+02 0.0028 30.4 10.9 93 60-154 159-266 (508)
174 PRK00174 acetyl-CoA synthetase 53.5 1.5E+02 0.0033 31.0 11.6 96 206-306 80-179 (637)
175 PRK09274 peptide synthase; Pro 53.5 1.2E+02 0.0025 31.2 10.5 78 226-305 40-121 (552)
176 TIGR02188 Ac_CoA_lig_AcsA acet 53.2 1.7E+02 0.0037 30.6 11.8 96 206-306 70-169 (625)
177 PRK08316 acyl-CoA synthetase; 53.1 1.4E+02 0.003 30.2 11.0 81 70-154 191-274 (523)
178 PRK07529 AMP-binding domain pr 53.0 1.4E+02 0.0031 31.3 11.2 96 206-304 38-136 (632)
179 PRK10946 entE enterobactin syn 52.5 1.4E+02 0.0031 30.4 11.0 92 60-155 180-287 (536)
180 TIGR01139 cysK cysteine syntha 52.0 1.2E+02 0.0027 28.2 9.5 65 84-149 47-112 (298)
181 PRK13295 cyclohexanecarboxylat 51.9 1.5E+02 0.0033 30.3 11.1 92 60-155 195-301 (547)
182 PLN02246 4-coumarate--CoA liga 51.9 1.1E+02 0.0024 31.3 10.0 94 60-154 177-286 (537)
183 KOG1176|consensus 51.5 74 0.0016 32.6 8.3 85 225-311 43-133 (537)
184 cd06448 L-Ser-dehyd Serine deh 51.4 1.5E+02 0.0033 28.0 10.0 62 87-149 45-106 (316)
185 PLN03013 cysteine synthase 50.9 1.3E+02 0.0028 29.9 9.5 66 84-149 164-230 (429)
186 PF03744 BioW: 6-carboxyhexano 50.7 17 0.00037 32.3 3.2 26 452-477 188-223 (239)
187 PRK03640 O-succinylbenzoic aci 50.7 1.4E+02 0.003 29.8 10.4 83 70-156 161-245 (483)
188 PF01041 DegT_DnrJ_EryC1: DegT 50.1 54 0.0012 31.6 7.0 89 50-148 27-121 (363)
189 PRK07008 long-chain-fatty-acid 49.9 1.2E+02 0.0027 30.9 10.0 84 70-155 196-282 (539)
190 TIGR02379 ECA_wecE TDP-4-keto- 49.7 60 0.0013 31.6 7.2 63 81-147 59-126 (376)
191 PLN02736 long-chain acyl-CoA s 49.5 1.1E+02 0.0024 32.3 9.8 85 226-312 77-165 (651)
192 PRK07788 acyl-CoA synthetase; 49.3 1.8E+02 0.0039 29.7 11.2 83 70-156 227-311 (549)
193 TIGR01136 cysKM cysteine synth 48.4 1.5E+02 0.0033 27.6 9.5 65 84-149 48-113 (299)
194 TIGR02275 DHB_AMP_lig 2,3-dihy 48.2 1.6E+02 0.0035 29.9 10.6 94 59-156 180-289 (527)
195 COG1022 FAA1 Long-chain acyl-C 47.6 1.5E+02 0.0033 30.9 9.9 93 58-154 187-293 (613)
196 PRK08279 long-chain-acyl-CoA s 47.5 1.7E+02 0.0037 30.4 10.7 91 61-155 198-303 (600)
197 COG0365 Acs Acyl-coenzyme A sy 47.1 1.6E+02 0.0035 30.1 9.9 96 209-310 25-125 (528)
198 PRK10252 entF enterobactin syn 46.8 2.2E+02 0.0047 33.1 12.3 92 60-154 596-703 (1296)
199 TIGR02316 propion_prpE propion 46.8 2.3E+02 0.0051 29.6 11.7 94 207-305 66-163 (628)
200 PF01297 TroA: Periplasmic sol 46.5 61 0.0013 29.4 6.4 113 57-171 113-230 (256)
201 TIGR01217 ac_ac_CoA_syn acetoa 46.5 1.1E+02 0.0024 32.2 9.2 78 226-305 113-194 (652)
202 PRK03584 acetoacetyl-CoA synth 46.2 2.4E+02 0.0051 29.8 11.6 93 61-156 262-371 (655)
203 PRK05857 acyl-CoA synthetase; 46.1 1.7E+02 0.0038 29.9 10.4 80 226-307 40-123 (540)
204 PRK07470 acyl-CoA synthetase; 46.1 1.9E+02 0.0042 29.3 10.7 96 60-156 161-270 (528)
205 PRK11706 TDP-4-oxo-6-deoxy-D-g 46.0 78 0.0017 30.7 7.4 59 84-146 62-125 (375)
206 PRK05620 long-chain-fatty-acid 45.2 1.9E+02 0.0042 29.8 10.6 94 60-154 179-286 (576)
207 PRK05852 acyl-CoA synthetase; 45.1 2.4E+02 0.0052 28.7 11.3 84 70-156 196-283 (534)
208 COG4009 Uncharacterized protei 45.1 1.1E+02 0.0024 21.8 5.8 63 70-143 10-76 (88)
209 KOG3111|consensus 45.0 1.9E+02 0.0041 24.9 8.2 95 47-168 47-174 (224)
210 PRK06839 acyl-CoA synthetase; 44.8 1.8E+02 0.0039 29.1 10.2 83 226-310 26-113 (496)
211 PRK08314 long-chain-fatty-acid 43.7 1.4E+02 0.0031 30.4 9.4 83 227-311 35-122 (546)
212 TIGR03595 Obg_CgtA_exten Obg f 43.5 28 0.00062 24.3 2.8 19 81-99 45-63 (69)
213 KOG0025|consensus 43.5 1E+02 0.0022 28.6 6.8 64 89-152 157-221 (354)
214 PLN03102 acyl-activating enzym 43.5 1.4E+02 0.0031 30.8 9.4 80 227-308 39-122 (579)
215 cd00640 Trp-synth-beta_II Tryp 43.4 2.4E+02 0.0053 25.2 10.6 68 82-150 39-106 (244)
216 PRK08633 2-acyl-glycerophospho 43.3 1.8E+02 0.0039 33.1 10.9 94 59-155 779-887 (1146)
217 PF09269 DUF1967: Domain of un 43.2 23 0.0005 24.7 2.3 21 78-98 42-62 (69)
218 PLN00011 cysteine synthase 42.9 2.1E+02 0.0045 27.2 9.5 65 84-149 58-124 (323)
219 PRK08162 acyl-CoA synthetase; 42.3 1.5E+02 0.0032 30.4 9.2 81 227-309 43-127 (545)
220 PRK08008 caiC putative crotono 42.1 2E+02 0.0043 29.1 10.0 81 227-309 37-121 (517)
221 PRK10524 prpE propionyl-CoA sy 42.0 2.4E+02 0.0052 29.5 10.9 95 206-305 66-164 (629)
222 PRK08751 putative long-chain f 41.9 1.6E+02 0.0034 30.3 9.3 80 227-308 50-134 (560)
223 PRK06381 threonine synthase; V 41.9 1.2E+02 0.0027 28.5 7.9 63 84-150 57-119 (319)
224 PRK07476 eutB threonine dehydr 41.6 2E+02 0.0043 27.3 9.2 63 85-150 61-123 (322)
225 TIGR01138 cysM cysteine syntha 41.0 2.5E+02 0.0054 26.1 9.6 61 87-148 52-113 (290)
226 cd01019 ZnuA Zinc binding prot 40.6 1.4E+02 0.0031 27.7 7.9 97 57-154 142-242 (286)
227 TIGR02372 4_coum_CoA_lig 4-cou 40.3 3.6E+02 0.0078 26.3 13.4 104 47-156 80-200 (386)
228 PRK06814 acylglycerophosphoeth 40.3 4E+02 0.0087 30.4 13.0 94 59-155 790-898 (1140)
229 KOG1250|consensus 40.2 1.4E+02 0.003 29.0 7.4 53 95-149 117-169 (457)
230 PRK13383 acyl-CoA synthetase; 40.2 2E+02 0.0043 29.2 9.7 83 227-311 60-146 (516)
231 PRK10717 cysteine synthase A; 40.0 2.4E+02 0.0052 26.8 9.6 61 87-148 57-118 (330)
232 KOG0025|consensus 39.9 2.8E+02 0.0062 25.8 9.1 103 238-343 150-255 (354)
233 TIGR03208 cyc_hxne_CoA_lg cycl 39.5 4.3E+02 0.0092 26.9 12.4 91 60-154 193-298 (538)
234 PRK07787 acyl-CoA synthetase; 39.3 2.6E+02 0.0056 27.9 10.3 91 60-155 126-231 (471)
235 PRK05677 long-chain-fatty-acid 39.2 1.8E+02 0.0038 30.0 9.2 79 227-307 49-132 (562)
236 PF10411 DsbC_N: Disulfide bon 39.1 27 0.00059 23.2 2.1 19 457-475 32-50 (57)
237 cd01449 TST_Repeat_2 Thiosulfa 38.5 78 0.0017 24.4 5.1 41 79-119 64-104 (118)
238 COG0399 WecE Predicted pyridox 38.3 1.1E+02 0.0025 29.6 6.9 83 75-161 56-148 (374)
239 PRK05605 long-chain-fatty-acid 38.1 2E+02 0.0044 29.5 9.5 82 227-310 57-142 (573)
240 PLN02861 long-chain-fatty-acid 38.0 2.6E+02 0.0057 29.6 10.4 84 226-311 76-163 (660)
241 COG1171 IlvA Threonine dehydra 38.0 2.8E+02 0.006 26.6 9.2 92 60-154 38-134 (347)
242 PLN02387 long-chain-fatty-acid 37.8 2.2E+02 0.0048 30.3 9.9 86 226-313 105-194 (696)
243 TIGR00936 ahcY adenosylhomocys 37.8 2.9E+02 0.0062 27.2 9.7 54 92-145 31-86 (406)
244 PRK07798 acyl-CoA synthetase; 37.5 4E+02 0.0087 26.8 11.5 82 226-309 27-112 (533)
245 PRK07514 malonyl-CoA synthase; 37.2 2.4E+02 0.0053 28.3 9.8 82 226-309 27-112 (504)
246 TIGR03588 PseC UDP-4-keto-6-de 36.9 1.8E+02 0.0038 28.2 8.3 66 78-146 54-127 (380)
247 PLN02614 long-chain acyl-CoA s 36.8 2.5E+02 0.0053 29.8 10.0 83 227-311 79-165 (666)
248 TIGR01137 cysta_beta cystathio 36.6 2.5E+02 0.0055 28.0 9.6 61 87-148 55-116 (454)
249 PRK06155 crotonobetaine/carnit 36.4 2.9E+02 0.0063 28.2 10.3 92 60-155 178-283 (542)
250 cd01561 CBS_like CBS_like: Thi 36.4 3.5E+02 0.0076 25.0 10.3 65 85-150 44-109 (291)
251 COG2805 PilT Tfp pilus assembl 36.3 1.8E+02 0.0039 27.3 7.3 92 47-139 140-246 (353)
252 PRK11658 UDP-4-amino-4-deoxy-L 36.2 1.5E+02 0.0033 28.7 7.8 64 78-145 58-126 (379)
253 PLN02330 4-coumarate--CoA liga 35.1 1.9E+02 0.0042 29.5 8.7 82 226-309 54-139 (546)
254 PLN02356 phosphateglycerate ki 34.8 3E+02 0.0065 27.3 9.3 63 84-147 94-157 (423)
255 TIGR01734 D-ala-DACP-lig D-ala 34.7 3.4E+02 0.0074 27.2 10.4 92 60-154 139-246 (502)
256 PRK08276 long-chain-fatty-acid 34.6 3E+02 0.0064 27.7 9.9 82 227-310 11-96 (502)
257 TIGR03443 alpha_am_amid L-amin 34.2 2.8E+02 0.0062 32.4 10.7 98 205-304 248-349 (1389)
258 PRK06382 threonine dehydratase 34.2 2.9E+02 0.0064 27.1 9.4 51 100-150 79-129 (406)
259 PRK11493 sseA 3-mercaptopyruva 33.9 79 0.0017 29.2 5.1 42 78-119 216-257 (281)
260 PRK13388 acyl-CoA synthetase; 33.9 2.9E+02 0.0064 28.2 9.8 81 227-309 26-111 (540)
261 PF07994 NAD_binding_5: Myo-in 33.8 3E+02 0.0065 25.7 8.7 68 73-142 130-227 (295)
262 PF08967 DUF1884: Domain of un 33.7 38 0.00083 24.3 2.2 68 73-156 9-76 (85)
263 PRK09088 acyl-CoA synthetase; 33.6 4.2E+02 0.0091 26.4 10.8 77 227-305 22-102 (488)
264 PRK12492 long-chain-fatty-acid 33.6 2.1E+02 0.0045 29.4 8.7 79 226-306 48-131 (562)
265 cd01519 RHOD_HSP67B2 Member of 33.4 1E+02 0.0022 23.1 4.9 41 79-119 52-92 (106)
266 PRK15407 lipopolysaccharide bi 33.1 1.5E+02 0.0033 29.5 7.2 56 88-147 106-166 (438)
267 PRK05850 acyl-CoA synthetase; 33.0 5.4E+02 0.012 26.5 11.7 83 226-311 34-123 (578)
268 PRK07059 Long-chain-fatty-acid 32.9 2.9E+02 0.0063 28.3 9.6 81 226-308 47-131 (557)
269 PRK09545 znuA high-affinity zi 32.4 2E+02 0.0043 27.1 7.5 98 52-154 161-266 (311)
270 PRK13391 acyl-CoA synthetase; 32.4 4.5E+02 0.0097 26.5 10.9 94 206-308 10-107 (511)
271 cd02071 MM_CoA_mut_B12_BD meth 32.4 2.5E+02 0.0053 22.0 9.8 86 259-347 11-103 (122)
272 cd07050 BMC_EutL_repeat2 ethan 32.3 79 0.0017 22.7 3.5 42 82-123 3-45 (87)
273 PRK06145 acyl-CoA synthetase; 31.6 4.7E+02 0.01 26.1 10.8 82 70-155 169-253 (497)
274 PLN02723 3-mercaptopyruvate su 31.1 1.2E+02 0.0025 28.8 5.8 44 78-121 254-297 (320)
275 PRK06087 short chain acyl-CoA 30.9 2.6E+02 0.0056 28.6 8.8 76 227-304 49-128 (547)
276 PRK08246 threonine dehydratase 30.8 4.5E+02 0.0097 24.7 9.7 58 92-150 67-124 (310)
277 PRK10595 SOS cell division inh 30.7 2.4E+02 0.0052 23.6 6.8 53 82-134 70-125 (164)
278 PLN02574 4-coumarate--CoA liga 30.5 3.2E+02 0.0069 28.1 9.5 83 227-311 66-153 (560)
279 PF10929 DUF2811: Protein of u 30.2 1.2E+02 0.0026 20.2 3.9 41 42-91 3-44 (57)
280 COG2236 Predicted phosphoribos 30.1 72 0.0016 27.5 3.8 29 70-98 7-36 (192)
281 PRK12406 long-chain-fatty-acid 30.1 4.9E+02 0.011 26.2 10.7 68 87-155 190-258 (509)
282 cd01563 Thr-synth_1 Threonine 30.0 2.5E+02 0.0054 26.5 7.9 57 93-150 70-126 (324)
283 PLN02479 acetate-CoA ligase 29.6 3.5E+02 0.0077 27.8 9.6 80 227-308 45-128 (567)
284 cd01017 AdcA Metal binding pro 29.4 2.1E+02 0.0045 26.4 7.1 59 95-153 172-233 (282)
285 COG4821 Uncharacterized protei 29.4 1.7E+02 0.0037 25.4 5.7 77 51-148 55-139 (243)
286 PRK14807 histidinol-phosphate 29.4 4.2E+02 0.0091 25.2 9.5 54 90-146 97-154 (351)
287 cd01018 ZntC Metal binding pro 29.3 2.3E+02 0.005 25.9 7.3 94 56-154 132-231 (266)
288 PRK07768 long-chain-fatty-acid 29.0 4.4E+02 0.0096 26.8 10.2 89 60-151 150-257 (545)
289 PRK06178 acyl-CoA synthetase; 28.7 3.7E+02 0.0081 27.6 9.6 83 227-311 58-144 (567)
290 cd01562 Thr-dehyd Threonine de 28.6 3.4E+02 0.0073 25.3 8.5 55 94-149 66-120 (304)
291 PF00818 Ice_nucleation: Ice n 28.0 26 0.00057 16.4 0.4 9 353-361 1-9 (16)
292 PRK13390 acyl-CoA synthetase; 27.8 5.8E+02 0.012 25.6 10.7 78 226-305 23-104 (501)
293 PRK01322 6-carboxyhexanoate--C 27.6 62 0.0013 28.9 3.0 26 452-477 188-223 (242)
294 PRK08638 threonine dehydratase 27.6 4.4E+02 0.0095 25.1 9.1 54 98-151 79-132 (333)
295 PF07494 Reg_prop: Two compone 27.4 52 0.0011 17.3 1.6 11 462-472 11-21 (24)
296 PRK06721 threonine synthase; R 27.3 3.3E+02 0.0072 26.1 8.2 55 95-150 77-132 (352)
297 cd06447 D-Ser-dehyd D-Serine d 27.2 3.2E+02 0.007 26.9 8.1 56 96-151 136-191 (404)
298 TIGR02035 D_Ser_am_lyase D-ser 27.1 3.1E+02 0.0068 27.2 8.1 57 96-152 154-210 (431)
299 COG1223 Predicted ATPase (AAA+ 27.1 1.5E+02 0.0033 27.1 5.2 58 47-107 197-267 (368)
300 PRK05638 threonine synthase; V 26.8 2.9E+02 0.0064 27.5 8.0 57 94-151 113-169 (442)
301 PRK08813 threonine dehydratase 26.6 5.8E+02 0.013 24.5 10.1 54 97-150 84-137 (349)
302 PRK12582 acyl-CoA synthetase; 26.6 3.3E+02 0.0072 28.5 8.9 77 226-304 79-164 (624)
303 TIGR01204 bioW 6-carboxyhexano 26.5 70 0.0015 28.4 3.1 24 452-475 181-214 (232)
304 KOG1252|consensus 26.3 4.2E+02 0.009 25.2 8.1 60 90-149 100-159 (362)
305 PRK12476 putative fatty-acid-- 26.3 4E+02 0.0086 27.8 9.4 82 226-309 67-154 (612)
306 PLN02550 threonine dehydratase 26.3 5.8E+02 0.013 26.6 10.0 59 89-150 155-213 (591)
307 TIGR01127 ilvA_1Cterm threonin 26.2 4.2E+02 0.009 25.7 8.9 52 98-149 52-103 (380)
308 PRK07786 long-chain-fatty-acid 26.1 4.2E+02 0.0092 27.0 9.4 80 227-308 42-125 (542)
309 PLN02430 long-chain-fatty-acid 25.9 4.7E+02 0.01 27.7 9.8 81 227-309 76-160 (660)
310 TIGR02326 transamin_PhnW 2-ami 25.6 5.9E+02 0.013 24.3 10.4 10 128-137 116-125 (363)
311 PRK06060 acyl-CoA synthetase; 25.5 4.2E+02 0.0091 28.2 9.5 79 227-307 30-112 (705)
312 PF13580 SIS_2: SIS domain; PD 25.5 2.1E+02 0.0044 23.1 5.6 50 74-123 84-136 (138)
313 PRK06702 O-acetylhomoserine am 25.4 3.1E+02 0.0068 27.2 7.8 56 90-147 97-154 (432)
314 cd01974 Nitrogenase_MoFe_beta 25.3 4.5E+02 0.0097 26.1 9.0 46 92-138 302-351 (435)
315 PRK07769 long-chain-fatty-acid 25.1 8E+02 0.017 25.6 12.3 82 226-309 54-141 (631)
316 COG1167 ARO8 Transcriptional r 25.0 3.3E+02 0.0071 27.3 8.0 57 246-307 176-236 (459)
317 PRK12483 threonine dehydratase 24.8 5.3E+02 0.011 26.4 9.4 53 98-150 89-141 (521)
318 PRK05851 long-chain-fatty-acid 24.8 5E+02 0.011 26.4 9.6 86 60-148 150-253 (525)
319 PRK08974 long-chain-fatty-acid 24.7 3.8E+02 0.0082 27.5 8.8 79 227-307 48-131 (560)
320 PRK07867 acyl-CoA synthetase; 24.7 5E+02 0.011 26.4 9.6 81 227-309 28-113 (529)
321 PRK06710 long-chain-fatty-acid 24.5 3.7E+02 0.008 27.6 8.7 79 227-307 49-131 (563)
322 PTZ00216 acyl-CoA synthetase; 24.4 5.6E+02 0.012 27.3 10.2 85 225-311 119-207 (700)
323 PRK06018 putative acyl-CoA syn 24.4 4.1E+02 0.0089 27.1 8.9 80 226-307 38-121 (542)
324 PRK08198 threonine dehydratase 24.4 5.2E+02 0.011 25.4 9.2 57 93-150 70-126 (404)
325 PRK09192 acyl-CoA synthetase; 23.4 5.9E+02 0.013 26.2 9.9 83 226-310 48-141 (579)
326 PF02254 TrkA_N: TrkA-N domain 23.4 2.4E+02 0.0053 21.4 5.5 61 84-145 54-114 (116)
327 KOG0136|consensus 23.2 1.2E+02 0.0026 31.3 4.3 29 333-361 126-154 (670)
328 PRK07409 threonine synthase; V 23.0 4.1E+02 0.0088 25.5 8.0 50 100-149 84-134 (353)
329 PRK06110 hypothetical protein; 22.6 6E+02 0.013 24.0 9.0 55 97-151 73-127 (322)
330 PTZ00342 acyl-CoA synthetase; 22.6 4.8E+02 0.01 28.2 9.2 86 226-313 90-193 (746)
331 PF00291 PALP: Pyridoxal-phosp 22.5 5.9E+02 0.013 23.5 9.0 55 93-148 56-110 (306)
332 cd02071 MM_CoA_mut_B12_BD meth 22.3 3.5E+02 0.0077 21.1 6.3 42 107-148 17-58 (122)
333 cd01137 PsaA Metal binding pro 22.3 2.9E+02 0.0063 25.6 6.6 96 57-153 138-239 (287)
334 PRK10696 tRNA 2-thiocytidine b 22.3 5.9E+02 0.013 23.1 8.8 70 77-146 12-93 (258)
335 PLN02409 serine--glyoxylate am 22.3 5.4E+02 0.012 25.1 8.9 57 90-147 81-144 (401)
336 PRK09162 hypoxanthine-guanine 22.1 2.2E+02 0.0047 24.3 5.3 43 70-113 17-60 (181)
337 cd03466 Nitrogenase_NifN_2 Nit 22.0 6E+02 0.013 25.2 9.2 56 92-148 299-358 (429)
338 PRK09029 O-succinylbenzoic aci 22.0 5.3E+02 0.011 25.5 9.0 77 227-305 28-108 (458)
339 KOG1175|consensus 22.0 7.5E+02 0.016 26.0 9.8 98 206-308 78-179 (626)
340 TIGR01279 DPOR_bchN light-inde 21.9 7.7E+02 0.017 24.2 10.1 65 92-157 273-338 (407)
341 cd00615 Orn_deC_like Ornithine 21.9 3.5E+02 0.0076 25.0 7.2 55 90-147 96-161 (294)
342 TIGR02618 tyr_phenol_ly tyrosi 21.9 8.1E+02 0.018 24.5 9.7 50 85-139 102-166 (450)
343 PF04122 CW_binding_2: Putativ 21.8 3.3E+02 0.0071 19.9 8.0 66 75-142 9-74 (92)
344 cd01016 TroA Metal binding pro 21.7 3.3E+02 0.0072 25.0 6.9 97 54-153 119-223 (276)
345 TIGR01747 diampropi_NH3ly diam 21.6 4.2E+02 0.0092 25.8 7.8 56 95-150 95-150 (376)
346 PRK02991 D-serine dehydratase; 21.5 4.7E+02 0.01 26.1 8.1 55 97-151 160-214 (441)
347 cd02067 B12-binding B12 bindin 21.1 3.9E+02 0.0085 20.5 9.0 39 110-148 20-58 (119)
348 PRK04813 D-alanine--poly(phosp 21.0 4.9E+02 0.011 26.0 8.7 77 227-305 27-107 (503)
349 TIGR03366 HpnZ_proposed putati 20.9 6E+02 0.013 23.1 8.6 60 84-147 112-172 (280)
350 PRK08180 feruloyl-CoA synthase 20.9 4.3E+02 0.0094 27.6 8.4 77 226-304 68-153 (614)
351 cd01448 TST_Repeat_1 Thiosulfa 20.8 2.5E+02 0.0055 21.6 5.2 42 78-119 64-106 (122)
352 PF02729 OTCace_N: Aspartate/o 20.8 4.7E+02 0.01 21.3 10.8 95 74-170 17-123 (142)
353 PF04915 DltD_N: DltD N-termin 20.7 74 0.0016 21.7 1.7 16 345-360 25-40 (62)
354 PF11142 DUF2917: Protein of u 20.6 2E+02 0.0044 19.6 3.9 22 452-473 37-58 (63)
355 PRK05939 hypothetical protein; 20.5 3.9E+02 0.0084 26.2 7.4 64 81-147 75-138 (397)
356 PRK09422 ethanol-active dehydr 20.4 6.9E+02 0.015 23.3 9.1 59 86-147 156-214 (338)
357 TIGR02991 ectoine_eutB ectoine 20.3 7.3E+02 0.016 23.4 9.1 51 99-149 72-122 (317)
358 TIGR02080 O_succ_thio_ly O-suc 20.1 4.7E+02 0.01 25.5 7.8 56 90-146 87-142 (382)
No 1
>KOG1179|consensus
Probab=100.00 E-value=1.6e-63 Score=464.44 Aligned_cols=432 Identities=52% Similarity=0.904 Sum_probs=389.1
Q ss_pred hhcccchhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q psy8225 42 QKTLPTYARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSK 115 (479)
Q Consensus 42 ~~~~~~~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~ 115 (479)
.+..+.++.++|..+++++|+++|+++. +|| |+.+++.++|+.|..+|++.||.||+.|+|.+||+.+.||+++
T Consensus 72 ~rr~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaK 151 (649)
T KOG1179|consen 72 SRRERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAK 151 (649)
T ss_pred hhccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHh
Confidence 4456688999999999999999999998 999 9999999999999999999999999999999999999999999
Q ss_pred cCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCC--cceEEecCCCCCCCccCCCccccccccCCcC
Q psy8225 116 IGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIP--GISLYAAGTRRKPQAKVLPSTTLLDEELPEV 193 (479)
Q Consensus 116 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (479)
+|++...||+++..+.|.|.++.++++++|++.+..+.+.++.+... .+..+..+... .+.+..++.+.++..
T Consensus 152 lGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~-----~~~g~~~L~~~l~~~ 226 (649)
T KOG1179|consen 152 LGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTS-----VPDGIESLLAKLSAA 226 (649)
T ss_pred hCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCC-----CCchHHHHHHhhccc
Confidence 99999999999999999999999999999999999888777744433 34555554322 123455566666555
Q ss_pred CCCCCc-ccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHH
Q psy8225 194 SAKSPT-EDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCL 272 (479)
Q Consensus 194 ~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l 272 (479)
...+.+ .........++++.+|||||||.||+.+++|..+...+..+...++++++|+++.++|++|.+|.+.++..++
T Consensus 227 ~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l 306 (649)
T KOG1179|consen 227 PKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCL 306 (649)
T ss_pred ccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHH
Confidence 554422 2235567788999999999999999999999999888887888899999999999999999999999999999
Q ss_pred hcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEEecCCChhhHHHHHHHhCcceeee
Q psy8225 273 LGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMIGNGLRPQVWEPFQKRFGLDRICE 352 (479)
Q Consensus 273 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~G~~l~~~~~~~~~~~~~~~~v~~ 352 (479)
..|+++++..+|+...+|+...+|+||++.-.--+++.|++++..+....+++|+..|..+.++++++|.++||..++.+
T Consensus 307 ~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNGLR~diW~~Fv~RFg~~~IgE 386 (649)
T KOG1179|consen 307 LHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNGLRPDIWQQFVKRFGIIKIGE 386 (649)
T ss_pred hcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCCCCchHHHHHHHHcCCCeEEE
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999988999
Q ss_pred eccccccCcccccCCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccccc
Q psy8225 353 FYGATEGNANLMNADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNG 432 (479)
Q Consensus 353 ~YG~tE~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~g 432 (479)
.||+||......+.+.+.|.+|+.....+-+.+++++.+|+++|++++|++|.|++|++||+|.++.++....|..-|.|
T Consensus 387 ~YgaTEgn~~~~N~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~G 466 (649)
T KOG1179|consen 387 FYGATEGNSNLVNYDGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLG 466 (649)
T ss_pred EeccccCcceeeeecCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhcc
Confidence 99999999999999999999998766667777899999999999999999999999999999999999888888777999
Q ss_pred ccC-cchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCC
Q psy8225 433 YAD-KKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDA 478 (479)
Q Consensus 433 Y~~-~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~ 478 (479)
|.+ ..++.++..+++|..||-||.|||+-..|+.|+|||.+|.-|+
T Consensus 467 Y~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDT 513 (649)
T KOG1179|consen 467 YAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDT 513 (649)
T ss_pred ccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCc
Confidence 999 5777889999999999999999999999999999999999886
No 2
>KOG1176|consensus
Probab=100.00 E-value=1.4e-62 Score=481.10 Aligned_cols=384 Identities=25% Similarity=0.372 Sum_probs=321.3
Q ss_pred cccEEE------Eeh-hhHHHHHHHHHHHHHcC--CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHH
Q psy8225 64 GAYKYT------VTF-QVEDHSNRIANFFKSKG--LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIH 134 (479)
Q Consensus 64 ~a~~~~------~Ty-~l~~~~~~la~~L~~~g--i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 134 (479)
+++++. +|| |+.+++.++|.+|.++| +++||+|++++||+++++++++||.+.|++..++||.+.+.++.+
T Consensus 34 ~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~ 113 (537)
T KOG1176|consen 34 TSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAK 113 (537)
T ss_pred ceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHH
Confidence 666655 999 99999999999999875 899999999999999999999999999999999999999999999
Q ss_pred HHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCC--CCccCCCccccccccCCcCCCCCCcccccCCCCCCcEE
Q psy8225 135 SIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRK--PQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLA 212 (479)
Q Consensus 135 ~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (479)
+++.++++++|++....+.+.++...+. .+++++..... ...........+..+........ ......+++++
T Consensus 114 ~~~~s~~kiif~d~~~~~~i~~~~~~~~-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~dd~~~ 188 (537)
T KOG1176|consen 114 QLKDSKPKLIFVDEDFYDKISEATSKLA-LKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDG----IRPVSEDDTAA 188 (537)
T ss_pred HHHhcCCeEEEEcCchHHHHHHHHhhcC-CceEEEecccCccccccccccccchhhccccCCCcc----cccCCCCCeEE
Confidence 9999999999999999988877766554 44444433210 00000000111333332222221 25567799999
Q ss_pred EEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHH
Q psy8225 213 YIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKD 292 (479)
Q Consensus 213 i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~ 292 (479)
++|||||||.||||++||++++.+.........+...++.++.+|++|.+|+...+...+..|++++....|++..+++.
T Consensus 189 il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~ 268 (537)
T KOG1176|consen 189 ILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDL 268 (537)
T ss_pred EecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHH
Confidence 99999999999999999999998888777677777899999999999999998777778888889999999999999999
Q ss_pred HHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccc-c-C-C
Q psy8225 293 CIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLM-N-A-D 367 (479)
Q Consensus 293 i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~-~-~-~ 367 (479)
+++|++|++..+|.++..|++.+.....+++++|.+. |+++++++.+++.+.+|...+.+.|||||+++.++ + . +
T Consensus 269 i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~ 348 (537)
T KOG1176|consen 269 IEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGP 348 (537)
T ss_pred HHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCc
Confidence 9999999999999999999999877778899999985 88899999999999999549999999999995554 2 2 2
Q ss_pred -CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhh
Q psy8225 368 -GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRN 446 (479)
Q Consensus 368 -~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~ 446 (479)
.+++++|++++ ++++++.+ ++|+ .+++++.||||+| |+ ++|.||+++|+.|++.+++
T Consensus 349 e~k~~svG~~~~------g~~~~v~~-e~g~----------~l~~~~~GEI~vr----g~-~imkGY~~NpeaT~~~~~~ 406 (537)
T KOG1176|consen 349 ERKPGSVGRLLP------GVRVKVLD-ETGV----------SLGPNQTGEICVR----GP-QVMKGYLKNPEATKEAFDD 406 (537)
T ss_pred cCcccccCcccc------ceEEEeeC-CCCC----------CCCCCCceEEEEE----Cc-ccchhhcCChHHHHhhccc
Confidence 27899999776 57776555 6666 5689999999999 77 9999999999999987762
Q ss_pred hccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 447 VYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 447 ~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|||+|||+||+|+||+|+|+||+||+.
T Consensus 407 -----~GW~~TGDiGy~D~DG~l~IvdR~KdlI 434 (537)
T KOG1176|consen 407 -----DGWFHTGDLGYFDEDGYLYIVDRSKDLI 434 (537)
T ss_pred -----CCccccCceEEEcCCCeEEEecchhhhe
Confidence 5999999999999999999999999984
No 3
>KOG1177|consensus
Probab=100.00 E-value=3.8e-62 Score=446.14 Aligned_cols=402 Identities=24% Similarity=0.339 Sum_probs=338.7
Q ss_pred chhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.|++++++-.++.-||+.|.++. +|| |+.+.++++|.+|...|+++||||++..||+.+|+..+|||.++|.+.
T Consensus 50 ~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~ 129 (596)
T KOG1177|consen 50 ETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVL 129 (596)
T ss_pred ccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEE
Confidence 67999999999999999999998 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhh-----HHHHHHhhc-------------cCCcceEEecCCCCCCCccCCCc
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAEL-----SEALTEVKD-------------SIPGISLYAAGTRRKPQAKVLPS 182 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 182 (479)
+++||.+..+|++..|++.+++++|+...+ .+.++++.. .+|.++-++..+++.+ ..+
T Consensus 130 v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~----~~G 205 (596)
T KOG1177|consen 130 VNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHP----LPG 205 (596)
T ss_pred eccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCc----CCC
Confidence 999999999999999999999999987542 233333322 1223333333332211 134
Q ss_pred cccccccCCcCCCCCCccc---ccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccch
Q psy8225 183 TTLLDEELPEVSAKSPTED---IKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLY 259 (479)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~ 259 (479)
...+++++..+........ .....+++.+.|.|||||||.|||+.+||.++++++......+++..++++++..|++
T Consensus 206 a~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~ 285 (596)
T KOG1177|consen 206 AFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLY 285 (596)
T ss_pred ceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchH
Confidence 4556666655443221111 1445679999999999999999999999999999999988899999999999999999
Q ss_pred hhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChh
Q psy8225 260 HTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQ 336 (479)
Q Consensus 260 h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~ 336 (479)
|.+|...+.++++..|++++++. .|++...+++|+++++|.++.+|+++..|++.+.....+++++|..+ |++++++
T Consensus 286 H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~e 365 (596)
T KOG1177|consen 286 HCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPE 365 (596)
T ss_pred HHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHH
Confidence 99999999999999999999964 79999999999999999999999999999999999999999999765 8999999
Q ss_pred hHHHHHHHhCcceeeeeccccccCcccccC------CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcccccc
Q psy8225 337 VWEPFQKRFGLDRICEFYGATEGNANLMNA------DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCK 410 (479)
Q Consensus 337 ~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~ 410 (479)
+++.+........+...||+||++++++.. .....++|+.++ +.+..++|.+ |. +++
T Consensus 366 Llk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~------h~Ea~iv~~~-g~----------~v~ 428 (596)
T KOG1177|consen 366 LLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMD------HYEAAIVDKD-GS----------EVP 428 (596)
T ss_pred HHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccc------ccccccccCC-CC----------ccc
Confidence 999999988876788899999999776521 134467777655 6888888844 44 457
Q ss_pred CCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 411 AEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 411 ~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.|..|||++| |. +.|.|||++++.+++...+ |+||+|||+|.+|++|+++|+||.|||.
T Consensus 429 ~~~~Gel~iR----GY-~tMl~Ywg~~~kT~eti~~-----drW~~TGDi~~m~enG~i~iVGRskdmI 487 (596)
T KOG1177|consen 429 LGTKGELLIR----GY-STMLGYWGEEEKTKETIGN-----DRWYDTGDIAVMDENGTIEIVGRSKDMI 487 (596)
T ss_pred cCCCceEEEE----ec-hhheeecCCcccchhhccc-----ccceecCceEEEcCCCcEEEEEcccCeE
Confidence 8889999999 77 9999999998888876653 8999999999999999999999999984
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-60 Score=483.04 Aligned_cols=400 Identities=29% Similarity=0.402 Sum_probs=332.7
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCc
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGV 118 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 118 (479)
.+.++.++|.++++.+|+++|+++. +|| ||.++++++|..|++.|+++||+|+|+++|++++++++|||+++|+
T Consensus 9 ~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Ga 88 (534)
T COG0318 9 AELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGA 88 (534)
T ss_pred ccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCE
Confidence 4567999999999999999999996 999 9999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCcc-ccccccCCcCCCCC
Q psy8225 119 VAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPST-TLLDEELPEVSAKS 197 (479)
Q Consensus 119 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 197 (479)
+++|+||.+...++.++++.+++++++++.++...........+....+........ .. ..++..........
T Consensus 89 v~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 162 (534)
T COG0318 89 VAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADD------RLPITLEALAAEGPGPD 162 (534)
T ss_pred EEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccc------cccccHHHHhhccCCcc
Confidence 999999999999999999999999999998755555555443332222222211100 00 12333322211111
Q ss_pred CcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcC--CCCCCeEEEeccchhhhhhHHHHHHHHhcC
Q psy8225 198 PTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTG--LTSDDVVYTTLPLYHTAGGLLGIGQCLLGG 275 (479)
Q Consensus 198 ~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G 275 (479)
... ....++++++++|||||||.||||++||+|+..+.......+. ++..|++++++|++|.+|+...+..++..|
T Consensus 163 ~~~--~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G 240 (534)
T COG0318 163 ADA--RPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGG 240 (534)
T ss_pred ccc--CCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcC
Confidence 111 2256899999999999999999999999999999888888888 899999999999999999988888889999
Q ss_pred ceEEecC--CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCc-eeEEE--ecCCChhhHHHHHHHhCccee
Q psy8225 276 STVVIRS--KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHS-VKMMI--GNGLRPQVWEPFQKRFGLDRI 350 (479)
Q Consensus 276 ~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~-lr~~~--G~~l~~~~~~~~~~~~~~~~v 350 (479)
+++++.+ .|++..++..+.++++|++..+|+++..|++........+.+ +|.++ |++++++++++|++.|+...+
T Consensus 241 ~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i 320 (534)
T COG0318 241 GTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAI 320 (534)
T ss_pred CEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCce
Confidence 9999988 699999999999999999999999999999998777666665 99988 778999999999999995379
Q ss_pred eeeccccccCcccccC-C-C---CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCC
Q psy8225 351 CEFYGATEGNANLMNA-D-G---KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESR 425 (479)
Q Consensus 351 ~~~YG~tE~~~~~~~~-~-~---~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~ 425 (479)
.+.||+||+++.++.. . . ..+++|.|+| +++++|+|+++++ +++ |+.|||+++ |
T Consensus 321 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p------g~~v~Ivd~~~~~----------~~p-g~vGei~ir----g 379 (534)
T COG0318 321 LEGYGLTETSPVVTINPPDDLLAKPGSVGRPLP------GVEVRIVDPDGGE----------VLP-GEVGEIWVR----G 379 (534)
T ss_pred EEeecccccCceeecCCCchhhhcCCcccccCC------CcEEEEEeCCCCc----------cCC-CCceEEEEE----C
Confidence 9999999998665432 2 2 4566777665 7999999988764 234 889999999 8
Q ss_pred cccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 426 AESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 426 ~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
| +++.|||++++.+.+.|++ +|||+|||+|++|+||+++|+||.||++
T Consensus 380 p-~v~~GY~~~pe~t~~~f~~-----~gW~~TGDlg~~d~~G~l~i~gR~kd~I 427 (534)
T COG0318 380 P-NVMKGYWNRPEATAEAFDE-----DGWLRTGDLGYVDEDGYLYIVGRLKDLI 427 (534)
T ss_pred c-hhhhhhcCChHHHHHhhcc-----CCeeeecceEEEcCCccEEEEeccceEE
Confidence 8 9999999998888777652 5999999999999999999999999974
No 5
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=4.4e-61 Score=467.95 Aligned_cols=389 Identities=23% Similarity=0.310 Sum_probs=319.8
Q ss_pred chhHHHHHHHhh-cCCCccccEEE--------Eeh-hhHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhh
Q psy8225 47 TYARPLFVRTIR-EVPMTGAYKYT--------VTF-QVEDHSNRIANFFKS-KGLQRGDAVALFMEGQPEYVCMWLGLSK 115 (479)
Q Consensus 47 ~~l~~~l~~~~~-~~p~~~a~~~~--------~Ty-~l~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~e~~~~~lA~~~ 115 (479)
|.-+++++++.. ..+++.|+++. +|| ||.+++.++|+.|++ .|+ +||||+|++||.+|.++++|||++
T Consensus 9 N~~~n~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~r 87 (528)
T COG0365 9 NLALNALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATAR 87 (528)
T ss_pred echhhhhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHH
Confidence 333567888876 35789999998 999 999999999999997 568 999999999999999999999999
Q ss_pred cCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHh------hccCCcceEEecCCCCCCCccCCCcccccccc
Q psy8225 116 IGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEV------KDSIPGISLYAAGTRRKPQAKVLPSTTLLDEE 189 (479)
Q Consensus 116 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (479)
+|++.+|+.+.++++++.+++++++++++|+.+......+.. .+.... +++.... ...|.+.
T Consensus 88 iGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~--~iv~~r~----------~~~~~~~ 155 (528)
T COG0365 88 IGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS--VVVVPRL----------GLWYDEA 155 (528)
T ss_pred cCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc--eEEeccc----------cccHHHH
Confidence 999999999999999999999999999999976544322211 111111 2222111 1445565
Q ss_pred CCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhh-hhhcCCCCCCeEEEeccchhhhhhHHHH
Q psy8225 190 LPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISG-RYQTGLTSDDVVYTTLPLYHTAGGLLGI 268 (479)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~-~~~~~~~~~d~~~~~~pl~h~~g~~~~~ 268 (479)
.+........ .....+++++++|||||||+||||+|+|..++...... ...+++.++|++++..++.|++|..+.+
T Consensus 156 ~~~~~~~~~~---~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v 232 (528)
T COG0365 156 VEKASEKFEF---EPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSV 232 (528)
T ss_pred hhccCCCCCc---cccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHH
Confidence 5544433322 33688999999999999999999999999776655544 4467888999999999999999999999
Q ss_pred HHHHhcCceEEecCC--C-ChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHH
Q psy8225 269 GQCLLGGSTVVIRSK--F-SASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQK 343 (479)
Q Consensus 269 ~~~l~~G~~~v~~~~--~-~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~ 343 (479)
+.++..|+++++.+. + ++.++++.|+++++|.++++|+.++.|.+.......++++||.+. |||++++.++++.+
T Consensus 233 ~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~ 312 (528)
T COG0365 233 FSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYS 312 (528)
T ss_pred HHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHH
Confidence 999999999998763 3 489999999999999999999999999998875667899999987 99999999999999
Q ss_pred HhCcceeeeeccccccCcccccCCC--CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEe
Q psy8225 344 RFGLDRICEFYGATEGNANLMNADG--KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMI 421 (479)
Q Consensus 344 ~~~~~~v~~~YG~tE~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~ 421 (479)
.+|+ ++.+.||+||++++...... ++++.|.|+| |+++.++|++ |+ ++++|+ |+|+++.
T Consensus 313 ~~g~-~i~d~~gqTEtg~~~~~~~~~~~~g~~g~p~p------G~~~~vvdd~-g~----------~~~~~~-G~Lvi~~ 373 (528)
T COG0365 313 ALGV-WILDIYGQTETGMGFIAGRPPVKNGSSGLPLP------GYAVRRVDDE-GN----------PVPPGV-GELVVRL 373 (528)
T ss_pred HhCC-CEeccccccccCccccCCCCCcCCCCCCCCCC------CceeEEECCC-CC----------cCCCCc-eEEEEeC
Confidence 9997 99999999999955543332 5566688776 8999999987 77 678888 9999994
Q ss_pred ecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 422 KESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 422 ~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
. .| +++.+||++++...+.+. ++||.|||.+++|+||++||+||.||++
T Consensus 374 ~--~p-~~~~~~w~d~er~~~~y~------~~~y~tGD~~~~DedGy~~i~GR~DDvI 422 (528)
T COG0365 374 P--WP-GMALTYWNDPERYKEAYF------GRWYRTGDWAERDEDGYFWLHGRSDDVI 422 (528)
T ss_pred C--Cc-hhhhhhhCCHHHHHHHHh------hceeecCceeEEccCCCEEEEeeccceE
Confidence 3 55 899999999876665543 3399999999999999999999999974
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.9e-60 Score=487.71 Aligned_cols=403 Identities=18% Similarity=0.221 Sum_probs=314.4
Q ss_pred ccchhHHHHHHHhhcCCCccccEE-------E-Eeh-hhHHHHHHHHHHHHHc---CCCCC-----------CEEEEEcC
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKY-------T-VTF-QVEDHSNRIANFFKSK---GLQRG-----------DAVALFME 101 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~-------~-~Ty-~l~~~~~~la~~L~~~---gi~~g-----------d~V~i~~~ 101 (479)
.-.++.++|.++++.+|+++|+.+ . +|| |+.+++.++|++|.+. |+++| |+|+|+++
T Consensus 59 ~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~ 138 (746)
T PTZ00342 59 VYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGS 138 (746)
T ss_pred ccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcC
Confidence 346799999999999999999986 3 999 9999999999999974 99998 99999999
Q ss_pred CchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCC----
Q psy8225 102 GQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQ---- 176 (479)
Q Consensus 102 n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---- 176 (479)
|++||+++++||+++|+++||+++.++.+++.++|++++++++|++.+..+.+.+....++.++ +++++......
T Consensus 139 N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~ 218 (746)
T PTZ00342 139 NSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEINI 218 (746)
T ss_pred CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccc
Confidence 9999999999999999999999999999999999999999999998887777766666666554 34443211000
Q ss_pred -------------ccCCC--------------------------------------------ccccccccCCcCCCCCCc
Q psy8225 177 -------------AKVLP--------------------------------------------STTLLDEELPEVSAKSPT 199 (479)
Q Consensus 177 -------------~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~ 199 (479)
..... ....|+++...... .
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~ 295 (746)
T PTZ00342 219 NKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTT---N 295 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhccc---C
Confidence 00000 00001111100000 0
Q ss_pred ccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhc--CCCCCCeEEEeccchhhhhhHHHHHHHHhcCce
Q psy8225 200 EDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQT--GLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGST 277 (479)
Q Consensus 200 ~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~ 277 (479)
.......++++++|+|||||||.||||++||+|+++.+....... .....+++++.+|++|++++.. .+.++..|++
T Consensus 296 ~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~-~~~~l~~G~~ 374 (746)
T PTZ00342 296 YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVI-AYLSFMLGGT 374 (746)
T ss_pred CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHH-HHHHHHcCCE
Confidence 011334678999999999999999999999999998876544321 2235689999999999999854 5567899999
Q ss_pred EEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcC--------CCCCC------------------------------
Q psy8225 278 VVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAV--------PEKPE------------------------------ 319 (479)
Q Consensus 278 ~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~--------~~~~~------------------------------ 319 (479)
+++.+. ++..+++.|+++++|++.++|.+++.|... +....
T Consensus 375 i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~ 453 (746)
T PTZ00342 375 INIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISS 453 (746)
T ss_pred EEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 998765 889999999999999999999999888642 10000
Q ss_pred ----CCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCccccc---CCCCCCcccccC-ccccCCCceeeE
Q psy8225 320 ----DTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMN---ADGKVGAVGYIP-YIAIPFYPVGLI 389 (479)
Q Consensus 320 ----~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~---~~~~~~~~g~~~-~~~~~~~~~~~~ 389 (479)
...++||.++ |+++++++.++|++.+|. .++++||+||+++.++. .+..++++|+|+ | +++++
T Consensus 454 kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~-~i~~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~p------g~e~k 526 (746)
T PTZ00342 454 KIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNV-NYYQGYGLTETTGPIFVQHADDNNTESIGGPISP------NTKYK 526 (746)
T ss_pred HHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCC-CEEEeeccCcccceeeeccCCCCCcccccCcCCC------cEEEE
Confidence 0125888877 789999999999999998 89999999998755432 234567888865 5 79999
Q ss_pred EeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcE
Q psy8225 390 KCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYF 469 (479)
Q Consensus 390 i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l 469 (479)
++|.+++. ..+.+..|||+++ || ++|.|||++|+.|++.|+ .||||+|||+|++|+||+|
T Consensus 527 i~d~~~~~----------~~~~~~~GEl~vr----Gp-~v~~GY~~~pe~T~~~f~-----~dGW~~TGDig~~d~dG~l 586 (746)
T PTZ00342 527 VRTWETYK----------ATDTLPKGELLIK----SD-SIFSGYFLEKEQTKNAFT-----EDGYFKTGDIVQINKNGSL 586 (746)
T ss_pred Eecccccc----------cCCCCCceEEEEe----cC-cccccccCChhhhhhhcC-----cCCcccCCcEEEECCCCeE
Confidence 99865433 1133457999998 88 999999999998887764 3899999999999999999
Q ss_pred EEecCCCCCC
Q psy8225 470 YFKDRTGDAC 479 (479)
Q Consensus 470 ~~~GR~~d~~ 479 (479)
+|+||+||++
T Consensus 587 ~i~gR~kdlI 596 (746)
T PTZ00342 587 TFLDRSKGLV 596 (746)
T ss_pred EEEccCCCeE
Confidence 9999999984
No 7
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.2e-59 Score=483.77 Aligned_cols=403 Identities=18% Similarity=0.167 Sum_probs=306.9
Q ss_pred chhHHHHHHHhhcCCCccccEE-----------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY-----------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGL 113 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~-----------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~ 113 (479)
.++.++|+++++.+|+++|+.+ . +|| ||.++++++|++|+++|+++||+|+|+++|++||++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 4789999999999999999973 1 799 99999999999999999999999999999999999999999
Q ss_pred hhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccC-Ccce-EEecCCCCCCC----ccCCCcccccc
Q psy8225 114 SKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSI-PGIS-LYAAGTRRKPQ----AKVLPSTTLLD 187 (479)
Q Consensus 114 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~----~~~~~~~~~~~ 187 (479)
+++|+++||+++.++.+++.+++++++++++|++.+....+....... +.++ ++..+...... .........++
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 204 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWD 204 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHH
Confidence 999999999999999999999999999999999876544433222211 1122 33332211000 00000123344
Q ss_pred ccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhc-----CCCCCCeEEEeccchhhh
Q psy8225 188 EELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQT-----GLTSDDVVYTTLPLYHTA 262 (479)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~~~~~pl~h~~ 262 (479)
+++......... .....++++++|+|||||||.||||++||+++...+......+ ++..+|++++.+|++|.+
T Consensus 205 ~~~~~~~~~~~~--~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~ 282 (666)
T PLN02614 205 EFLKLGEGKQYD--LPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIF 282 (666)
T ss_pred HHHhhcccCCCC--CCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHH
Confidence 443322111111 1234578999999999999999999999999988766554332 467899999999999999
Q ss_pred hhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC-------------------------
Q psy8225 263 GGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK------------------------- 317 (479)
Q Consensus 263 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~------------------------- 317 (479)
++.. ....+..|+++++.+ +++..+++.++++++|++.++|++++.+......
T Consensus 283 ~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 360 (666)
T PLN02614 283 DRVI-EECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMK 360 (666)
T ss_pred HHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 8754 455678899998865 5899999999999999999999999877632100
Q ss_pred ------CCC-------------C-CCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccc-cCC---CCCC
Q psy8225 318 ------PED-------------T-QHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLM-NAD---GKVG 371 (479)
Q Consensus 318 ------~~~-------------~-l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~-~~~---~~~~ 371 (479)
... . .++||.++ |+++++++ ++|.+.++...+++.||+||+++.++ ..+ .+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~g 439 (666)
T PLN02614 361 KGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDMLG 439 (666)
T ss_pred cCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeeccccCCcCC
Confidence 000 0 15788877 67788764 66777776338999999999875443 222 2457
Q ss_pred cccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCC
Q psy8225 372 AVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHG 451 (479)
Q Consensus 372 ~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~ 451 (479)
++|+|+| +++++++|.+.+. ..++++|+.|||+++ || ++|.|||++++.|.+.|.
T Consensus 440 svG~p~p------g~evki~d~~~~~--------~~~~~~g~~GEl~vr----Gp-~v~~GY~~~pe~T~~~f~------ 494 (666)
T PLN02614 440 TVGPPVP------NVDIRLESVPEME--------YDALASTPRGEICIR----GK-TLFSGYYKREDLTKEVLI------ 494 (666)
T ss_pred cccCcCC------ceEEEEeeecccC--------cccCCCCCCceEEEc----CC-cccccccCCHHHhhhhhc------
Confidence 7888766 7999998733221 015688999999998 88 999999999988887764
Q ss_pred CcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 452 DAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 452 ~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|||+|||+|++|+||+|+|+||+||++
T Consensus 495 dGw~~TGDlg~~d~dG~l~i~gR~kd~i 522 (666)
T PLN02614 495 DGWLHTGDVGEWQPNGSMKIIDRKKNIF 522 (666)
T ss_pred cCCcccceEEEEcCCCCEEEEEcchhce
Confidence 7999999999999999999999999985
No 8
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.1e-58 Score=481.89 Aligned_cols=407 Identities=20% Similarity=0.202 Sum_probs=322.4
Q ss_pred ccchhHHHHHHHhhcCCCccccEE-----------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKY-----------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWL 111 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~-----------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~l 111 (479)
...++.++|+++++.+|+++|+.+ . +|| ||.++++++|++|+++|+++||+|+|+++|++||+++++
T Consensus 42 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~l 121 (651)
T PLN02736 42 EIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDH 121 (651)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 346799999999999999999842 2 899 999999999999999999999999999999999999999
Q ss_pred HhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCC-CCCC----ccCCCccccc
Q psy8225 112 GLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTR-RKPQ----AKVLPSTTLL 186 (479)
Q Consensus 112 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~ 186 (479)
||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.......+.++.++..+. .... .........+
T Consensus 122 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 201 (651)
T PLN02736 122 ACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTY 201 (651)
T ss_pred HHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEH
Confidence 9999999999999999999999999999999999998877766666555555554333211 1000 0000112334
Q ss_pred cccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHH
Q psy8225 187 DEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLL 266 (479)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~ 266 (479)
++++......... .....++++++|+|||||||.||||++||+++...+......+++.++|++++.+|++|.+++.
T Consensus 202 ~~~~~~~~~~~~~--~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~- 278 (651)
T PLN02736 202 SKLLAQGRSSPQP--FRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERV- 278 (651)
T ss_pred HHHHHhcccCCCC--CCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHH-
Confidence 4444322211111 1234678999999999999999999999999999888887778889999999999999999985
Q ss_pred HHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCC-----------------------------C
Q psy8225 267 GIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPE-----------------------------K 317 (479)
Q Consensus 267 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~-----------------------------~ 317 (479)
.++.++..|+++++.+. ++..+++.|+++++|++.++|.+++.+.+... .
T Consensus 279 ~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (651)
T PLN02736 279 NQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKN 357 (651)
T ss_pred HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCC
Confidence 56778999999988764 78899999999999999999999987754310 0
Q ss_pred CCC------------CC-CceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccC---CCCCCcccccCcc
Q psy8225 318 PED------------TQ-HSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNA---DGKVGAVGYIPYI 379 (479)
Q Consensus 318 ~~~------------~l-~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~ 379 (479)
... .+ +++|.++ |+++++++.+++++.+|. .+++.||+||+++.++.. ...++++|+|+|
T Consensus 358 ~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~-~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p- 435 (651)
T PLN02736 358 PSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGG-RVLEGYGMTETSCVISGMDEGDNLSGHVGSPNP- 435 (651)
T ss_pred CCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCC-CeEEEechHHhchheeccCCCCCCCCccCCccC-
Confidence 000 01 4788877 788999999999999998 899999999988655422 235577787766
Q ss_pred ccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCC
Q psy8225 380 AIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGD 459 (479)
Q Consensus 380 ~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD 459 (479)
+++++++|.+++.... ...+++.|||+++ || ++|.|||++++.+.+.|. .+|||+|||
T Consensus 436 -----g~~v~i~d~~~~~~~~-------~~~~~~~GEl~vr----gp-~v~~GY~~~~~~t~~~~~-----~dgw~~TGD 493 (651)
T PLN02736 436 -----ACEVKLVDVPEMNYTS-------EDQPYPRGEICVR----GP-IIFKGYYKDEVQTREVID-----EDGWLHTGD 493 (651)
T ss_pred -----ceEEEEEEccccCccc-------CCCCCCCceEEec----CC-ccccccccCHHHHHhhhc-----cCCCeeccc
Confidence 7999999854332110 1234457999998 88 999999999988877664 379999999
Q ss_pred eeEEecCCcEEEecCCCCCC
Q psy8225 460 ILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 460 ~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|++|+||+|+|+||+||++
T Consensus 494 lg~~d~dG~l~i~GR~kd~i 513 (651)
T PLN02736 494 IGLWLPGGRLKIIDRKKNIF 513 (651)
T ss_pred eEEEcCCCcEEEEEechhhe
Confidence 99999999999999999985
No 9
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=4.8e-59 Score=459.66 Aligned_cols=388 Identities=23% Similarity=0.286 Sum_probs=304.0
Q ss_pred chhHHHHHHHhhcCCCccccEEE-------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCc
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT-------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGV 118 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~-------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 118 (479)
.++..++.++++.+|+.+|+.+. +|| |+.+++.++|++|+..|+..||+|+|++.|+++|+++.+||+.+|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~ 95 (613)
T COG1022 16 HTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGA 95 (613)
T ss_pred ccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 44789999999999998898876 999 9999999999999999997799999999999999999999999999
Q ss_pred eeeeecCCcchHHHHHHHHhccceEEEeChh-hHHHHHHhhccCCcceEEe-cCC--CCCCCccCCCccccccccCCcC-
Q psy8225 119 VAAFINTNQRQHILIHSIKVAECKAIIYGAE-LSEALTEVKDSIPGISLYA-AGT--RRKPQAKVLPSTTLLDEELPEV- 193 (479)
Q Consensus 119 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~- 193 (479)
+.||++++.+++++.++|++++++++|++.. ..+.+..+...++.+.... ... ..... .....++......
T Consensus 96 v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 171 (613)
T COG1022 96 VSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVE----AKALVLEVFPDEGI 171 (613)
T ss_pred eEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccc----hhhccccccccccc
Confidence 9999999999999999999999999999874 4455555554433211000 000 00000 0001111111110
Q ss_pred -----CCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcC-CCCCCeEEEeccchhhhhhHHH
Q psy8225 194 -----SAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTG-LTSDDVVYTTLPLYHTAGGLLG 267 (479)
Q Consensus 194 -----~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~~~~~pl~h~~g~~~~ 267 (479)
.............++|.|.|+|||||||.||||++||+|+++++........ ..++|+.++.+|+.|++.+++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~ 251 (613)
T COG1022 172 SLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFE 251 (613)
T ss_pred hhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHH
Confidence 0000111114568899999999999999999999999999999999999886 8999999999999999998766
Q ss_pred HHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcC--------CCCC---------------------
Q psy8225 268 IGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAV--------PEKP--------------------- 318 (479)
Q Consensus 268 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~--------~~~~--------------------- 318 (479)
....+..|.++.. ..++..+++.++.++||.+.++|.+++.+.+. ....
T Consensus 252 ~~~~~~~g~~~~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~ 329 (613)
T COG1022 252 GGLALYGGVTVLF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLG 329 (613)
T ss_pred HHHHhhcceEEEe--cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcc
Confidence 5555555655554 55899999999999999999999998763221 0000
Q ss_pred ------------------C-CCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccC---CCCCCccc
Q psy8225 319 ------------------E-DTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNA---DGKVGAVG 374 (479)
Q Consensus 319 ------------------~-~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~---~~~~~~~g 374 (479)
. ..-.++|.+. |+++++++...|+ .+|+ ++.++||+||+++.++.. ...++++|
T Consensus 330 ~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~-~lGi-~i~eGYGlTEts~~~~v~~~~~~~~gtvG 407 (613)
T COG1022 330 GGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFR-SLGI-PILEGYGLTETSAVVSVNPPDRFVLGTVG 407 (613)
T ss_pred cCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHH-HcCC-CeEEEecccccccceEEccccCcccCCcC
Confidence 0 0013677766 6789999987776 5688 999999999998776533 35779999
Q ss_pred ccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcE
Q psy8225 375 YIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAA 454 (479)
Q Consensus 375 ~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~ 454 (479)
.|+| ++++++.| .|||++| || ++|.|||++|+.|.+.|+. |||
T Consensus 408 ~p~p------~~evKI~d---------------------~GEilVR----G~-~Vm~GYyk~pe~Taeaf~~-----DGW 450 (613)
T COG1022 408 KPLP------GIEVKIAD---------------------DGEILVR----GP-NVMKGYYKNPEATAEAFTE-----DGW 450 (613)
T ss_pred CcCC------CceEEEcc---------------------CceEEEe----cc-hhcchhcCChHHHhhhccc-----cCC
Confidence 9877 78888876 4999999 88 9999999999999988863 999
Q ss_pred EEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 455 FNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 455 ~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+|||+|.+|++|+|+|+||+||++
T Consensus 451 f~TGDlg~~d~~g~L~i~gRkK~~i 475 (613)
T COG1022 451 FRTGDLGELDEDGYLVITGRKKELI 475 (613)
T ss_pred cccCceeEEcCCCcEEEeecccceE
Confidence 9999999999999999999999974
No 10
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.6e-58 Score=479.92 Aligned_cols=401 Identities=18% Similarity=0.206 Sum_probs=308.0
Q ss_pred chhHHHHHHHhhcCCCccccEE-----------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY-----------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGL 113 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~-----------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~ 113 (479)
.++.++|.+.++++|+++|+.+ . +|| ||.++++++|++|.++|+++||+|+|+++|++||++++|||
T Consensus 43 ~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 122 (660)
T PLN02861 43 DSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (660)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 5789999999999999999963 2 899 99999999999999999999999999999999999999999
Q ss_pred hhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCC-cce-EEecCCCCCCC----ccCCCcccccc
Q psy8225 114 SKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIP-GIS-LYAAGTRRKPQ----AKVLPSTTLLD 187 (479)
Q Consensus 114 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~----~~~~~~~~~~~ 187 (479)
+++|++++||++.++.+++.+++++++++++|++.+....+.......+ .++ ++..++..... .........++
T Consensus 123 ~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 202 (660)
T PLN02861 123 NSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWE 202 (660)
T ss_pred HHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHH
Confidence 9999999999999999999999999999999998776555544433332 233 33333211000 00001122344
Q ss_pred ccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcC-----CCCCCeEEEeccchhhh
Q psy8225 188 EELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTG-----LTSDDVVYTTLPLYHTA 262 (479)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~-----~~~~d~~~~~~pl~h~~ 262 (479)
+++........ .....++++++|+|||||||.||||++||++++..+......++ +..+|++++.+|++|.+
T Consensus 203 ~~~~~~~~~~~---~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~ 279 (660)
T PLN02861 203 EFSLMGSLDCE---LPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVY 279 (660)
T ss_pred HHHHhCcccCC---CCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHH
Confidence 43322211111 12346789999999999999999999999999987766554433 46789999999999999
Q ss_pred hhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcC----------------------------
Q psy8225 263 GGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAV---------------------------- 314 (479)
Q Consensus 263 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~---------------------------- 314 (479)
++... +.++..|+++++. .+++..+++.|+++++|++.++|++++.|.+.
T Consensus 280 ~~~~~-~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~ 357 (660)
T PLN02861 280 DQVIE-TYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLR 357 (660)
T ss_pred HHHHH-HHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHh
Confidence 97654 4578999999886 46889999999999999999999999887631
Q ss_pred ---------CCCCCC-------CC-CceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCccccc-CC---CCCC
Q psy8225 315 ---------PEKPED-------TQ-HSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMN-AD---GKVG 371 (479)
Q Consensus 315 ---------~~~~~~-------~l-~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~-~~---~~~~ 371 (479)
+..... .+ .++|.++ |+++++++. +|.+.++...+++.||+||+++.++. .. ..++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~g 436 (660)
T PLN02861 358 KGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVG 436 (660)
T ss_pred cCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeecccccCCCCC
Confidence 000000 01 4788877 778999874 57677775479999999998755432 11 2457
Q ss_pred cccccCccccCCCceeeEEeCC-CCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccC
Q psy8225 372 AVGYIPYIAIPFYPVGLIKCDP-ETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSH 450 (479)
Q Consensus 372 ~~g~~~~~~~~~~~~~~~i~d~-~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~ 450 (479)
++|+|+| +++++++|. +.|.. .+++++.|||+++ || ++|.|||++++.+.+.|.
T Consensus 437 svG~p~p------~~ev~i~d~~~~g~~---------~~~~~~~GEi~vr----Gp-~v~~GY~~~pe~T~~~f~----- 491 (660)
T PLN02861 437 TVGVPMT------TIEARLESVPEMGYD---------ALSDVPRGEICLR----GN-TLFSGYHKRQDLTEEVLI----- 491 (660)
T ss_pred CccCccC------ceEEEEEEccccCcc---------cCCCCCceeEEEc----CC-cccccccCCHHHHHhhhh-----
Confidence 7888766 799999873 33321 2245568999998 88 999999999998887774
Q ss_pred CCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 451 GDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 451 ~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|||+|||+|++|+||+|+|+||+||++
T Consensus 492 -dGw~~TGDlg~~d~dG~l~i~GR~kd~I 519 (660)
T PLN02861 492 -DGWFHTGDIGEWQPNGAMKIIDRKKNIF 519 (660)
T ss_pred -ccCcccCceEEECCCCcEEEEeccccce
Confidence 7999999999999999999999999985
No 11
>KOG1256|consensus
Probab=100.00 E-value=5.2e-59 Score=452.27 Aligned_cols=405 Identities=19% Similarity=0.197 Sum_probs=326.4
Q ss_pred cccchhHHHHHHHhhcCCCccccEEE-----------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q psy8225 44 TLPTYARPLFVRTIREVPMTGAYKYT-----------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWL 111 (479)
Q Consensus 44 ~~~~~l~~~l~~~~~~~p~~~a~~~~-----------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~l 111 (479)
..+.|+++.|++.+..+|+.+++.+. +|| |..+++..+|.+|+++|+++++.|+|++.|++||+++..
T Consensus 72 ~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~ 151 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEM 151 (691)
T ss_pred CCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHH
Confidence 46688999999999999999999987 799 999999999999999999999999999999999999999
Q ss_pred HhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC-hhhHHHHHHhhcc--CCcceEEecCCCCC-CCc----cCCCcc
Q psy8225 112 GLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG-AELSEALTEVKDS--IPGISLYAAGTRRK-PQA----KVLPST 183 (479)
Q Consensus 112 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~----~~~~~~ 183 (479)
||...|+++|||+.+++++++.+++++++..++|++ ++....+.+.... .+.++.++.-+... ... .....+
T Consensus 152 a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v 231 (691)
T KOG1256|consen 152 ACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEV 231 (691)
T ss_pred HHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEE
Confidence 999999999999999999999999999999999998 5566666665553 66777555433221 111 111237
Q ss_pred ccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhh---hhh---cCCCCCCeEEEecc
Q psy8225 184 TLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISG---RYQ---TGLTSDDVVYTTLP 257 (479)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~---~~~---~~~~~~d~~~~~~p 257 (479)
.+|+++++-+........ ..+.+++.+.|+|||||||.|||||+||+|+.+.+... ... .....+|++++.+|
T Consensus 232 ~S~~e~~~lG~~~~~~~~-~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLP 310 (691)
T KOG1256|consen 232 YSWDEFEELGKKNQRKPR-VPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLP 310 (691)
T ss_pred EEHHHHHhhcccccCCCC-CCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCc
Confidence 789999888865554443 47789999999999999999999999999999865431 111 11234699999999
Q ss_pred chhhhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCC----CC----------------
Q psy8225 258 LYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVP----EK---------------- 317 (479)
Q Consensus 258 l~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~----~~---------------- 317 (479)
+.|++..++..+ .+..|+++.+.. -|+..+.+.|+..+||.+.++|.+|+.+.+.. ..
T Consensus 311 LAHi~er~~~~~-~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k 388 (691)
T KOG1256|consen 311 LAHIFERVVELY-TFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYK 388 (691)
T ss_pred HHHHHHHHHHHh-HhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999999877655 557888888865 57788888899999999999999987643211 00
Q ss_pred ------CCCCC-------------------CceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccC-cccccC--C
Q psy8225 318 ------PEDTQ-------------------HSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGN-ANLMNA--D 367 (479)
Q Consensus 318 ------~~~~l-------------------~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~-~~~~~~--~ 367 (479)
..... .++|.++ ++|+++++.+.++..+|+ +|+++||+||++ +.++.. +
T Consensus 389 ~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~-~v~eGYGlTEts~g~~~~~~~d 467 (691)
T KOG1256|consen 389 LEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGC-RVLEGYGLTETSAGTTLTLPGD 467 (691)
T ss_pred HHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCc-eeeecccccccCCceEeccCCC
Confidence 00000 2566666 678999999999999999 999999999987 444433 3
Q ss_pred CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhh
Q psy8225 368 GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNV 447 (479)
Q Consensus 368 ~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~ 447 (479)
...+++|.|+| +++++++|...-.. -..|..||||+| |+ ++|.|||++|+.|++.++.
T Consensus 468 ~~lgsvG~p~p------~~~vKL~dvpe~ny----------~a~~~~GEIcir----G~-~Vf~GYyK~p~~T~e~ide- 525 (691)
T KOG1256|consen 468 NVLGSVGPPVP------GNEVKLVDVPEMNY----------DADGSKGEICVR----GP-NVFMGYYKDPEKTAEAIDE- 525 (691)
T ss_pred CCCCCcCCccc------CceEEEechHHhCc----------CcCCCcceEEEe----cc-hhceeccCChHHHhhhhcc-
Confidence 45688888776 68899877664432 244557999999 88 9999999999999999864
Q ss_pred ccCCCcEEEcCCeeEEecCCcEEEecCCCCC
Q psy8225 448 YSHGDAAFNTGDILIKDKFQYFYFKDRTGDA 478 (479)
Q Consensus 448 ~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~ 478 (479)
|||++|||+|++|++|.|+|.||+|++
T Consensus 526 ----DGWLhTGDiG~~~p~G~l~IidRkK~i 552 (691)
T KOG1256|consen 526 ----DGWLHTGDIGEWDPNGTLKIIDRKKNI 552 (691)
T ss_pred ----ccccccccceeECCCccEEEEecccce
Confidence 999999999999999999999999986
No 12
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=4.6e-57 Score=470.80 Aligned_cols=409 Identities=19% Similarity=0.168 Sum_probs=310.2
Q ss_pred chhHHHHHHHhhcCCCccccEE-------------------------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEE
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY-------------------------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALF 99 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~-------------------------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~ 99 (479)
.|+.++|.+.++.+|+++|+.+ . +|| |+.++++++|++|.++|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 6789999999999999999942 1 799 999999999999999999999999999
Q ss_pred cCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCCc-
Q psy8225 100 MEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQA- 177 (479)
Q Consensus 100 ~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~- 177 (479)
++|++||+++++||+++|++++||++.++.+++.++|++++++++|++.+....+.......+.++ ++++++......
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~ 217 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSDS 217 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhhh
Confidence 999999999999999999999999999999999999999999999999887777666655555444 444433211000
Q ss_pred ----cCCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhc-CCCCCCeE
Q psy8225 178 ----KVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQT-GLTSDDVV 252 (479)
Q Consensus 178 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~ 252 (479)
........|+++...+....... ....++++++|+|||||||.||||++||+++...+......+ ++..+|++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~ 295 (696)
T PLN02387 218 SLSGSSNWTVSSFSEVEKLGKENPVDP--DLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVY 295 (696)
T ss_pred hhhccCCcEEEEHHHHHHhhccCCCCC--CCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEE
Confidence 00011223444433222111111 234678999999999999999999999999998877665443 57889999
Q ss_pred EEeccchhhhhhHHHHHHHHhcCceEEecCCC------C--hhHHHHHHHHhcccEEEEehHHHHHHhcCCCCC------
Q psy8225 253 YTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKF------S--ASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKP------ 318 (479)
Q Consensus 253 ~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~------~--~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~------ 318 (479)
++.+|++|.+++.... .++..|+++.+.... + +..++..++++++|++.++|.+++.+.+.....
T Consensus 296 l~~lPl~Hi~~~~~~~-~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~ 374 (696)
T PLN02387 296 LAYLPLAHILELAAES-VMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGG 374 (696)
T ss_pred EEECcHHHHHHHHHHH-HHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccH
Confidence 9999999999975533 356677777654321 1 234677899999999999999998876421000
Q ss_pred -------------------------CC----------------CCCceeEEE--ecCCChhhHHHHHHHhCcceeeeecc
Q psy8225 319 -------------------------ED----------------TQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYG 355 (479)
Q Consensus 319 -------------------------~~----------------~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG 355 (479)
.. ...++|.++ |+++++++.+.++..+|+ .+++.||
T Consensus 375 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~-~v~~~YG 453 (696)
T PLN02387 375 LAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGA-PIGQGYG 453 (696)
T ss_pred HHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCC-CeeEeec
Confidence 00 015788877 788999998888878998 8999999
Q ss_pred ccccCccccc---CCCCCCcccccCccccCCCceeeEEeCCCCC-CccccCCCccccccCCCCceEEEEeecCCcccccc
Q psy8225 356 ATEGNANLMN---ADGKVGAVGYIPYIAIPFYPVGLIKCDPETS-EPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFN 431 (479)
Q Consensus 356 ~tE~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~-~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~ 431 (479)
+||+++.++. .+...+++|.|+| +++++++|.+++ ..+.+ +++..|||+++ || ++|.
T Consensus 454 ~TEt~~~~~~~~~~~~~~gsvG~p~p------~~evkivd~~~~~~~~~~--------~~~p~GEi~vr----Gp-~v~~ 514 (696)
T PLN02387 454 LTETCAGATFSEWDDTSVGRVGPPLP------CCYVKLVSWEEGGYLISD--------KPMPRGEIVIG----GP-SVTL 514 (696)
T ss_pred hhhcccceeecCcccCCCCccCCCCC------ceEEEEeeccccCcccCC--------CCCCCceEEec----cC-cccc
Confidence 9999765432 1234577777665 799999984433 32211 23457999998 88 9999
Q ss_pred cccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 432 GYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 432 gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|||++++.+.+.|.. -.+|+|||+|||+|++|+||+|+|.||+||++
T Consensus 515 GY~~~pe~T~~~f~~-d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~i 561 (696)
T PLN02387 515 GYFKNQEKTDEVYKV-DERGMRWFYTGDIGQFHPDGCLEIIDRKKDIV 561 (696)
T ss_pred hhcCCHHHHhhhhcc-ccCCCceeecCceEEECCCCcEEEEEcccceE
Confidence 999999888876631 01123599999999999999999999999985
No 13
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=7.2e-57 Score=458.40 Aligned_cols=399 Identities=18% Similarity=0.209 Sum_probs=317.6
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 119 (479)
...++.+.|.+.++++|+++|+.+. +|| ||.++++++|+.|.+ .+||+|+++++|++++++++|||+++|++
T Consensus 17 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~v 93 (539)
T PRK06334 17 SGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGKI 93 (539)
T ss_pred cCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCCe
Confidence 3466899999999999999999875 999 999999999999987 38999999999999999999999999999
Q ss_pred eeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCC--cceEEecCCCCCCCccCCCccccccccCC-----c
Q psy8225 120 AAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIP--GISLYAAGTRRKPQAKVLPSTTLLDEELP-----E 192 (479)
Q Consensus 120 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 192 (479)
++|+++.++.+++.++++.++++++|++.+....+.+...... ...++..++... ...+.+... .
T Consensus 94 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~~ 165 (539)
T PRK06334 94 PVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRK--------ELSFWEKCRIGIYMS 165 (539)
T ss_pred eEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhh--------hccHHHhhhhhhhhc
Confidence 9999999999999999999999999999876665544332100 112222221100 000000000 0
Q ss_pred CCCCC--CcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHH
Q psy8225 193 VSAKS--PTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQ 270 (479)
Q Consensus 193 ~~~~~--~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~ 270 (479)
..... .........++++++++|||||||.||+|++||+++..........+++..+|++++.+|++|.+|+...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~ 245 (539)
T PRK06334 166 IPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCTLF 245 (539)
T ss_pred CCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHHHH
Confidence 00000 0000123467899999999999999999999999999887777777788899999999999999998777788
Q ss_pred HHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCc
Q psy8225 271 CLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGL 347 (479)
Q Consensus 271 ~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~ 347 (479)
++..|+++++.. .+++..+++.|+++++|++.++|++++.|++........+++||.++ |+++++++.+++.+.++.
T Consensus 246 ~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~ 325 (539)
T PRK06334 246 PLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPH 325 (539)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCC
Confidence 899999998875 57999999999999999999999999999887655555678999877 889999999999999954
Q ss_pred ceeeeeccccccCcccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeec
Q psy8225 348 DRICEFYGATEGNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKE 423 (479)
Q Consensus 348 ~~v~~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~ 423 (479)
..+++.||+||++..+... ....+++|+|++ +++++++|++++. ++++|+.|||+++
T Consensus 326 ~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~------g~~v~i~d~~~~~----------~~~~g~~Gel~v~--- 386 (539)
T PRK06334 326 IQLRQGYGTTECSPVITINTVNSPKHESCVGMPIR------GMDVLIVSEETKV----------PVSSGETGLVLTR--- 386 (539)
T ss_pred CeEEecccccccCceEEeccCCCCCCCCcCceecC------CCEEEEEcCCCCc----------cCCCCceEEEEEe---
Confidence 4899999999998665422 123355676655 7999999977666 6789999999998
Q ss_pred CCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 424 SRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 424 ~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+ +++.|||++++.+... ..+++|||+|||+|++|+||+++|.||.||++
T Consensus 387 -g~-~~~~GY~~~~~~~~~~----~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~i 436 (539)
T PRK06334 387 -GT-SLFSGYLGEDFGQGFV----ELGGETWYVTGDLGYVDRHGELFLKGRLSRFV 436 (539)
T ss_pred -cC-cccccccCCcccccce----eeCCceeEECCCEEEECCCCeEEEEeccCCeE
Confidence 77 9999999987754311 11357899999999999999999999999985
No 14
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-56 Score=459.31 Aligned_cols=425 Identities=41% Similarity=0.712 Sum_probs=342.5
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.+.++.++|.++++++|+++|+++. +|| ||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 35 ~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~ 114 (600)
T PRK08279 35 SKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVV 114 (600)
T ss_pred CcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 4467999999999999999999987 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCcCCCCCCc
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPT 199 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (479)
+++++.++.+++.++++.++++++|++.+....+.+......... ++..+.... .....+..+.+......... .
T Consensus 115 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~ 190 (600)
T PRK08279 115 ALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTL---DDPEGYEDLAAAAAGAPTTN-P 190 (600)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccc---cccccHHHHhhhcccCCccC-C
Confidence 999999999999999999999999999887766655544333222 222221110 00111112222111111110 0
Q ss_pred ccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEE
Q psy8225 200 EDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVV 279 (479)
Q Consensus 200 ~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v 279 (479)
........+++++|+|||||||.||||++||+++...+......+++.++|++++.+|++|.+|+...++.++..|++++
T Consensus 191 ~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v 270 (600)
T PRK08279 191 ASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLA 270 (600)
T ss_pred CcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEE
Confidence 11133456889999999999999999999999999998888888889999999999999999998877888899999999
Q ss_pred ecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEEecCCChhhHHHHHHHhCcceeeeecccccc
Q psy8225 280 IRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMIGNGLRPQVWEPFQKRFGLDRICEFYGATEG 359 (479)
Q Consensus 280 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~ 359 (479)
+.+.+++..+++.++++++|++.++|++++.+............++|.+.|++++++++++|.+.++...+++.||+||+
T Consensus 271 ~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~ 350 (600)
T PRK08279 271 LRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLMIGNGLRPDIWDEFQQRFGIPRILEFYAASEG 350 (600)
T ss_pred EcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEEecCCCCHHHHHHHHHHhCcceeeeeeccccc
Confidence 99999999999999999999999999999998887655544567888888999999999999999997579999999999
Q ss_pred CcccccCCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchh
Q psy8225 360 NANLMNADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKAS 439 (479)
Q Consensus 360 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~ 439 (479)
+.........++++|.+.+.... +..+..++.+++..+.+.++...+++.|+.|||++.+. ++ +++.|| +++..
T Consensus 351 ~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~--~~-~~~~GY-~~~~~ 424 (600)
T PRK08279 351 NVGFINVFNFDGTVGRVPLWLAH--PYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRIT--DR-GPFDGY-TDPEA 424 (600)
T ss_pred ceeecccCCCCcccccccccccc--cceeeeeccCcCceeeCCCCccccCCCCCceeEEEEec--Cc-cccccc-CCchh
Confidence 86655555566777765432211 35566677788888888888888899999999986543 66 899999 65554
Q ss_pred H-HHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 440 E-KKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 440 ~-~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+ +.++.+.+.++++||+|||+|++|+||++++.||.||++
T Consensus 425 t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~i 465 (600)
T PRK08279 425 SEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTF 465 (600)
T ss_pred hHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeE
Confidence 4 445555555668999999999999999999999999975
No 15
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.1e-57 Score=449.64 Aligned_cols=388 Identities=26% Similarity=0.375 Sum_probs=306.3
Q ss_pred HHHHhhcCCCccccEE-E---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCc
Q psy8225 53 FVRTIREVPMTGAYKY-T---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQ 127 (479)
Q Consensus 53 l~~~~~~~p~~~a~~~-~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~ 127 (479)
|+++++++||++|+++ . +|| ||.++++++|..|+++|+++||+|+++++|+++++++++||+++|++++|++|.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6889999999999999 5 999 9999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhccceEEEe----ChhhHHHHHHhhccCC-cceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 128 RQHILIHSIKVAECKAIIY----GAELSEALTEVKDSIP-GISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 128 ~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
+.+++.++++.++++++|+ +......+........ ...++.++..... ..+.+...........
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-- 149 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLP---------KKEALKSASLSDEPQS-- 149 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCT---------TCHHHHHHHHCHCSHS--
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccc---------cccccccccccccccc--
Confidence 9999999999999999997 3322223333333222 2223333211100 0000000000000000
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhh--hhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEe
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGR--YQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVI 280 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~--~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~ 280 (479)
....++++++++|||||||.||+|.++|++++..+..+. ...+++ |++++.+|++|.+|++..++.++..|+++++
T Consensus 150 ~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~ 227 (417)
T PF00501_consen 150 PEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVL 227 (417)
T ss_dssp TTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEE
T ss_pred CCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccccccccccc
Confidence 000468899999999999999999999999998877754 222223 6999999999999987889999999999999
Q ss_pred cCCCC---hhHHHHHHHHhcccEEEEehHHHHHHhcCCCCC----CCCCCceeEEE--ecCCChhhHHHHHHHhCcceee
Q psy8225 281 RSKFS---ASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKP----EDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRIC 351 (479)
Q Consensus 281 ~~~~~---~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~----~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~ 351 (479)
.+... +..+++.++++++|++.++|++++.|++..+.. ...++++|.++ |+++++++.+++++.++...++
T Consensus 228 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~ 307 (417)
T PF00501_consen 228 PSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPII 307 (417)
T ss_dssp ESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEE
T ss_pred cccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccce
Confidence 88654 467899999999999999999999998733222 34677899875 8999999999999999876899
Q ss_pred eeccccccCcccccC--C---CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCc
Q psy8225 352 EFYGATEGNANLMNA--D---GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRA 426 (479)
Q Consensus 352 ~~YG~tE~~~~~~~~--~---~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~ 426 (479)
+.||+||++..++.. . .+++++|.|+| +++++++|+++++ ++++|+.|||+++ ||
T Consensus 308 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~ivd~~~~~----------~~~~g~~Gei~i~----~~ 367 (417)
T PF00501_consen 308 NLYGSTETGSIATIRPPEDDIEKPGSVGKPLP------GVEVKIVDPNTGE----------PLPPGEPGEIVIR----GP 367 (417)
T ss_dssp EEEEEGGGSSEEEEEETTTHHSSTTSEBEEST------TEEEEEECTTTSS----------BESTTSEEEEEEE----ST
T ss_pred ecccccccceeeeccccccccccccccccccc------ccccccccccccc----------ccccccccccccc----CC
Confidence 999999999887633 2 35677888766 7999999988887 5689999999999 88
Q ss_pred ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 427 ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 427 ~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++.||+++++.+.+.|.+ +|||+|||+|++|+||+++++||+||++
T Consensus 368 -~~~~gy~~~~~~~~~~~~~-----~~~~~TGD~g~~d~~G~~~~~GR~~~~i 414 (417)
T PF00501_consen 368 -NVFSGYYNDPELTAEAFID-----DGWYRTGDLGRLDEDGYLYILGRSDDMI 414 (417)
T ss_dssp -TSBSEETTBHHHHHHHEET-----TSEEEEEEEEEEETTSEEEEEEEGSCEE
T ss_pred -ccceeeecccccccccccc-----ccceecceEEEECCCCeEEEEEeeCCEE
Confidence 9999999998777776541 5799999999999999999999999974
No 16
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-56 Score=456.97 Aligned_cols=393 Identities=21% Similarity=0.291 Sum_probs=324.1
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|++.++.+|+++|+++. +|| ||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 128 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIIL 128 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 47899999999999999999987 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
+++.++.+++.++++.++++++|++.+....+..+....+.+..+........ ........+++++.......
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----- 201 (549)
T PRK07788 129 LNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDE--PSGSTDETLDDLIAGSSTAP----- 201 (549)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccc--cCCcCcccHHHHhcCCCCCC-----
Confidence 99999999999999999999999998776666554444444444332211110 00122334555443322111
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
.....++.++++|||||||.||+|+++|+++...+......+++..++++++.+|++|.+|+. .++.++..|+++++..
T Consensus 202 ~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~-~~~~~l~~G~~~v~~~ 280 (549)
T PRK07788 202 LPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWA-HLTLAMALGSTVVLRR 280 (549)
T ss_pred CCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHH-HHHHHHHhCCEEEECC
Confidence 122356778999999999999999999999998878777778888999999999999999974 4567888999999988
Q ss_pred CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 283 KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
.+++..+++.++++++|++.++|++++.|++.... ....+++||.++ |+++++++.+++.+.++. .+++.||+||
T Consensus 281 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE 359 (549)
T PRK07788 281 RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGP-VLYNLYGSTE 359 (549)
T ss_pred CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCc-cceeccCcch
Confidence 89999999999999999999999999999887654 444578999876 889999999999999998 8999999999
Q ss_pred cCcccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccccccc
Q psy8225 359 GNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYA 434 (479)
Q Consensus 359 ~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~ 434 (479)
++...... ...++++|+|.+ +++++++|++ ++ +++.|+.|||+++ |+ .++.||+
T Consensus 360 ~~~~~~~~~~~~~~~~~~vG~~~~------~~~~~i~d~~-~~----------~~~~g~~Gel~v~----g~-~~~~gY~ 417 (549)
T PRK07788 360 VAFATIATPEDLAEAPGTVGRPPK------GVTVKILDEN-GN----------EVPRGVVGRIFVG----NG-FPFEGYT 417 (549)
T ss_pred hchhhccChhhhhhcCCCcccCCC------CcEEEEECCC-cC----------CCCCCCeEEEEEe----CC-Ccccccc
Confidence 88654432 234567777665 7899999854 44 5678999999998 77 8999999
Q ss_pred CcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 435 DKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++... . .+|||+|||+|++|+||+++|.||+||++
T Consensus 418 ~~~~~~--~-------~~g~~~TGDl~~~~~~g~l~~~GR~dd~i 453 (549)
T PRK07788 418 DGRDKQ--I-------IDGLLSSGDVGYFDEDGLLFVDGRDDDMI 453 (549)
T ss_pred CCCccc--c-------cCCceecCceEEEcCCCCEEEeccCcceE
Confidence 887541 1 27899999999999999999999999985
No 17
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=4.2e-56 Score=460.96 Aligned_cols=411 Identities=19% Similarity=0.189 Sum_probs=317.7
Q ss_pred cccchhHHHHHHHhhcCCCccccEE--------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q psy8225 44 TLPTYARPLFVRTIREVPMTGAYKY--------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGL 113 (479)
Q Consensus 44 ~~~~~l~~~l~~~~~~~p~~~a~~~--------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~ 113 (479)
...+...++|++++..+|+++|+++ . +|| ||.+++.++|++|+++|+++||+|+++++|++++++++|||
T Consensus 49 ~~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~ 128 (628)
T TIGR02316 49 GRTNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLAC 128 (628)
T ss_pred CEeeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3346678999999999999999987 1 999 99999999999999999999999999999999999999999
Q ss_pred hhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh---------HHHHHHhhccC--CcceEEecCCCCCCCccCCCc
Q psy8225 114 SKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL---------SEALTEVKDSI--PGISLYAAGTRRKPQAKVLPS 182 (479)
Q Consensus 114 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 182 (479)
+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.++.... ....+++++............
T Consensus 129 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 208 (628)
T TIGR02316 129 ARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIPGR 208 (628)
T ss_pred HHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCc
Confidence 9999999999999999999999999999999997532 22222222221 122333333211000000001
Q ss_pred cccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHH-hhhhhhhcCCCCCCeEEEeccchhh
Q psy8225 183 TTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFM-AISGRYQTGLTSDDVVYTTLPLYHT 261 (479)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~-~~~~~~~~~~~~~d~~~~~~pl~h~ 261 (479)
...++++.......... .....++++++|+|||||||.||||+++|.+++.. .......++++++|++++..|++|.
T Consensus 209 ~~~~~~~~~~~~~~~~~--~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 286 (628)
T TIGR02316 209 DVDYAALRTQHEDAQVP--VEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWV 286 (628)
T ss_pred cccHHHHhhccccCCCC--ceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCee
Confidence 12333333221111111 12245789999999999999999999999997543 4445556788999999999999999
Q ss_pred hhhHHHHHHHHhcCceEEecCC----CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCC
Q psy8225 262 AGGLLGIGQCLLGGSTVVIRSK----FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGL 333 (479)
Q Consensus 262 ~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l 333 (479)
.|+...++.++..|+++++.+. +++..+++.++++++|++.++|++++.|.+.... ...++++||.++ |+++
T Consensus 287 ~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l 366 (628)
T TIGR02316 287 VGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPL 366 (628)
T ss_pred ehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCC
Confidence 9887778899999999998763 4788999999999999999999999998876532 334678999877 8999
Q ss_pred ChhhHHHHHHHhCcceeeeeccccccCcccccC-------CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcc
Q psy8225 334 RPQVWEPFQKRFGLDRICEFYGATEGNANLMNA-------DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLC 406 (479)
Q Consensus 334 ~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~ 406 (479)
++++.+++++.++. .+++.||+||++..+... ....+++|+|+| +++++++|+++|+
T Consensus 367 ~~~~~~~~~~~~~~-~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~------g~~v~i~d~~~g~--------- 430 (628)
T TIGR02316 367 DEPTAHWITDGLGK-PVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMY------GYHLRVLDEATGR--------- 430 (628)
T ss_pred CHHHHHHHHHHhCC-CEEecccccccCceeecCCCCCCcCCCCCCCcccCcC------CceEEEEECCCCC---------
Confidence 99999999999998 899999999998543221 224466777665 7999999986676
Q ss_pred ccccCCCCceEEEEeecCCc--ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 407 IPCKAEEPGILIGMIKESRA--ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 407 ~~~~~~~~Gel~v~~~~~~~--~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|+.|+.|||+++ || .+.+.|||++++...+.+...+ +++||+|||+|++|+||+|+|+||.||++
T Consensus 431 -~~~~g~~Gel~v~----gp~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~TGD~g~~d~dG~l~i~GR~dd~i 498 (628)
T TIGR02316 431 -PCGPNEKGVLTVV----PPLPPGCLSTVWGDDARFLKTYWSHF--KRPLYSSFDWGIRDEDGYTFILGRTDDVI 498 (628)
T ss_pred -CCCCCCcEEEEEe----cCCCccccccccCChHHHHHhhhhcC--CCCEEECCceEEEcCCCcEEEEEcCcceE
Confidence 5688999999998 55 2578999998765544332222 36799999999999999999999999985
No 18
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=4.7e-56 Score=461.83 Aligned_cols=407 Identities=19% Similarity=0.243 Sum_probs=313.7
Q ss_pred chhHHHHHHHhh-cCCCccccEEE---------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q psy8225 47 TYARPLFVRTIR-EVPMTGAYKYT---------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSK 115 (479)
Q Consensus 47 ~~l~~~l~~~~~-~~p~~~a~~~~---------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~ 115 (479)
|...++|++++. .+|+++|+++. +|| ||.+++.++|+.|++.|+++||+|+++++|++|+++++|||++
T Consensus 88 N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~ 167 (666)
T PLN02654 88 NICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACAR 167 (666)
T ss_pred eHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 566889998876 48999999872 999 9999999999999999999999999999999999999999999
Q ss_pred cCceeeeecCCcchHHHHHHHHhccceEEEeChhhH---------HHHHHhhccC-----CcceEEecCCCCCC---Ccc
Q psy8225 116 IGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS---------EALTEVKDSI-----PGISLYAAGTRRKP---QAK 178 (479)
Q Consensus 116 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~ 178 (479)
+|++++|+++.++.+++.+++++++++++|++.... ..+....... ....++........ ...
T Consensus 168 ~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (666)
T PLN02654 168 IGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTK 247 (666)
T ss_pred cCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccc
Confidence 999999999999999999999999999999976532 1122111111 00111111110000 000
Q ss_pred CC-CccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHH-HhhhhhhhcCCCCCCeEEEec
Q psy8225 179 VL-PSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMF-MAISGRYQTGLTSDDVVYTTL 256 (479)
Q Consensus 179 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~~~~~ 256 (479)
.. .....|+++....... ........+++++|+|||||||.||||+++|.+++. ........++++++|++++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~ 324 (666)
T PLN02654 248 WQEGRDVWWQDVVPNYPTK---CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTA 324 (666)
T ss_pred cccCCcccHHHHhhcCCCC---CCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcC
Confidence 00 0011122222111100 001234678999999999999999999999999764 344555677899999999999
Q ss_pred cchhhhhhHHHHHHHHhcCceEEecCC----CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE-
Q psy8225 257 PLYHTAGGLLGIGQCLLGGSTVVIRSK----FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI- 329 (479)
Q Consensus 257 pl~h~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~- 329 (479)
|++|++|..+.++.+++.|+++++.+. +++..+++.|+++++|++.++|++++.|.+.... ...++++||.++
T Consensus 325 ~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~ 404 (666)
T PLN02654 325 DCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGS 404 (666)
T ss_pred CchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEE
Confidence 999999987888899999999998763 4789999999999999999999999999886532 334578999876
Q ss_pred -ecCCChhhHHHHHHHhCc--ceeeeeccccccCccccc-C----CCCCCcccccCccccCCCceeeEEeCCCCCCcccc
Q psy8225 330 -GNGLRPQVWEPFQKRFGL--DRICEFYGATEGNANLMN-A----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRN 401 (479)
Q Consensus 330 -G~~l~~~~~~~~~~~~~~--~~v~~~YG~tE~~~~~~~-~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~ 401 (479)
|+++++++.+++.+.+|. ..+.+.||+||+++.+.. . +.+++++|.|+| +++++++|++ |+
T Consensus 405 ~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~------g~~v~i~d~~-g~---- 473 (666)
T PLN02654 405 VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFF------GVQPVIVDEK-GK---- 473 (666)
T ss_pred ecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCC------CceEEEECCC-CC----
Confidence 899999999999999983 279999999998865432 1 345677887766 7999999854 44
Q ss_pred CCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 402 KDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 402 ~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++.++.|||+++.. .| +++.|||++++.+...+ |...+|||+|||+|++|+||+++|+||+||++
T Consensus 474 ------~~~~~~~Gel~v~~~--~p-~~~~gy~~~~~~~~~~~---~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I 539 (666)
T PLN02654 474 ------EIEGECSGYLCVKKS--WP-GAFRTLYGDHERYETTY---FKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVI 539 (666)
T ss_pred ------CCCCCCceEEEEcCC--Cc-hhhhhhcCChHHHHHhh---hhcCCCEEEeCceEEECCCCcEEEeeeccCeE
Confidence 456778899999821 25 89999999987665433 33347899999999999999999999999974
No 19
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=7.9e-56 Score=458.57 Aligned_cols=408 Identities=25% Similarity=0.344 Sum_probs=320.4
Q ss_pred hcccchhHHHHHHHhhcCCCccccEEE-----------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHH
Q psy8225 43 KTLPTYARPLFVRTIREVPMTGAYKYT-----------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMW 110 (479)
Q Consensus 43 ~~~~~~l~~~l~~~~~~~p~~~a~~~~-----------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~ 110 (479)
+..|.++.++|.+.++.+|+++|+++. +|| ||.+++.++|+.|+++|+++||+|+++++|++++++++
T Consensus 21 ~~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~ 100 (632)
T PRK07529 21 RDLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFAL 100 (632)
T ss_pred hcCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 357788999999999999999999861 999 99999999999999999999999999999999999999
Q ss_pred HHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh-----HHHHHHhhccCCcceE-EecCCCCCCC--cc----
Q psy8225 111 LGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL-----SEALTEVKDSIPGISL-YAAGTRRKPQ--AK---- 178 (479)
Q Consensus 111 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~---- 178 (479)
|||+++| +++|+++.++.+++.++++.++++++|++... ...+..+....+.++. +.++...... ..
T Consensus 101 lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 179 (632)
T PRK07529 101 WGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVP 179 (632)
T ss_pred HHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccccc
Confidence 9999999 57999999999999999999999999997543 2333333444444443 2222211000 00
Q ss_pred -----CCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEE
Q psy8225 179 -----VLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVY 253 (479)
Q Consensus 179 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~ 253 (479)
.......+.+.+......... .......+++++++|||||||.||+|++||++++..+......+++..+++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l 258 (632)
T PRK07529 180 LIRRKAHARILDFDAELARQPGDRLF-SGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVF 258 (632)
T ss_pred ccccccccccCCHHHHHhcCCCcccc-ccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 011223344433332211111 01233678999999999999999999999999998877777777888999999
Q ss_pred EeccchhhhhhHHHHHHHHhcCceEEecCC--C-C---hhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeE
Q psy8225 254 TTLPLYHTAGGLLGIGQCLLGGSTVVIRSK--F-S---ASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKM 327 (479)
Q Consensus 254 ~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~--~-~---~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~ 327 (479)
+.+|++|.++.+..++.++..|+++++.+. + + ...+++.++++++|++.++|+++..|++.... ..++++||.
T Consensus 259 ~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~slr~ 337 (632)
T PRK07529 259 CGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDISSLRY 337 (632)
T ss_pred EecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCccceEE
Confidence 999999999988888899999999999763 2 1 35788999999999999999999999876543 235789998
Q ss_pred EE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccC----CCCCCcccccCccccCCCceeeEE--eCCCCCCcc
Q psy8225 328 MI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIK--CDPETSEPI 399 (479)
Q Consensus 328 ~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i--~d~~~~~~i 399 (479)
++ |+++++++.++|++.++. ++++.||+||++..+... ..+++++|.|+| ++.+++ +|++ |..
T Consensus 338 v~~gg~~l~~~l~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p------~~~v~i~~~d~~-g~~- 408 (632)
T PRK07529 338 ALCGAAPLPVEVFRRFEAATGV-RIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLP------YQRVRVVILDDA-GRY- 408 (632)
T ss_pred EEEcCCCCCHHHHHHHHHHhCC-cEeeeecccccCcccccCCccccccCCCcccccC------CceEEEEEcCCC-Ccc-
Confidence 77 888999999999999998 999999999998665432 235677888765 455555 4543 311
Q ss_pred ccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 400 RNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 400 ~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
..+|++|+.|||+++ || +++.||++++.....++ ++|||+|||+|++|+||++++.||.||++
T Consensus 409 ------~~~~~~g~~Gel~v~----gp-~v~~GY~~~~~~~~~~~------~~gw~~TGDlg~~d~dG~l~i~GR~~d~i 471 (632)
T PRK07529 409 ------LRDCAVDEVGVLCIA----GP-NVFSGYLEAAHNKGLWL------EDGWLNTGDLGRIDADGYFWLTGRAKDLI 471 (632)
T ss_pred ------cccCCCCCceEEEEE----CC-CccccccCCcccccccc------CCCceEcCcEEEEcCCceEEEEecccCEE
Confidence 126789999999998 88 99999998776544332 37999999999999999999999999974
No 20
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.4e-56 Score=458.12 Aligned_cols=413 Identities=17% Similarity=0.176 Sum_probs=312.5
Q ss_pred hhhhcccchhHHHHHHHhhc--CCCccccEEE---------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH
Q psy8225 40 GMQKTLPTYARPLFVRTIRE--VPMTGAYKYT---------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYV 107 (479)
Q Consensus 40 ~~~~~~~~~l~~~l~~~~~~--~p~~~a~~~~---------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~ 107 (479)
.++...-|+..++++++++. +|+++|+++. +|| ||.+++.++|++|+++|+++||+|+++++|++|++
T Consensus 52 wf~~~~~n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~ 131 (647)
T PTZ00237 52 WFKGGELNTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL 131 (647)
T ss_pred hCCCCeeeHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH
Confidence 44444447789999998865 7999999872 999 99999999999999999999999999999999999
Q ss_pred HHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh---------hHHHHHHhhccCC--cceEEecCCCC---
Q psy8225 108 CMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE---------LSEALTEVKDSIP--GISLYAAGTRR--- 173 (479)
Q Consensus 108 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~~~~~~~~~~--~~~~~~~~~~~--- 173 (479)
+++|||+++|++++|+++.++.+++.+++++++++++|+++. ..+.+.++..... ..++++.....
T Consensus 132 ~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 211 (647)
T PTZ00237 132 IAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITS 211 (647)
T ss_pred HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccc
Confidence 999999999999999999999999999999999999999752 2223333322111 11233221100
Q ss_pred CCCc------cCCCccccccccCCcCCC--CCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHH-HHHHhhhhhhhc
Q psy8225 174 KPQA------KVLPSTTLLDEELPEVSA--KSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVR-AMFMAISGRYQT 244 (479)
Q Consensus 174 ~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~-l~~~~~~~~~~~ 244 (479)
.... ........|++++..... ...........++++++|+|||||||.||||+++|.+ +...........
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~ 291 (647)
T PTZ00237 212 ESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII 291 (647)
T ss_pred ccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc
Confidence 0000 000111233433321110 0000111335678999999999999999999999998 444333334445
Q ss_pred CCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC--CC----hhHHHHHHHHhcccEEEEehHHHHHHhcCCCC-
Q psy8225 245 GLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK--FS----ASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK- 317 (479)
Q Consensus 245 ~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~--~~----~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~- 317 (479)
....++++++..|++|+.+. ..++.++..|+++++.+. +. +..+++.|+++++|++.++|++++.|.+....
T Consensus 292 ~~~~~d~~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 370 (647)
T PTZ00237 292 EKDIPTVVFSHSSIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEA 370 (647)
T ss_pred CCCCCcEEEEcCCCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccc
Confidence 67778999999999998764 457789999999998763 12 67899999999999999999999999875321
Q ss_pred ----CCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccC-C---CCCCcccccCccccCCCcee
Q psy8225 318 ----PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNA-D---GKVGAVGYIPYIAIPFYPVG 387 (479)
Q Consensus 318 ----~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~-~---~~~~~~g~~~~~~~~~~~~~ 387 (479)
...++++||.++ |+++++++.+++++.+|. ++++.||+||+++.+... + ...+++|+|+| +++
T Consensus 371 ~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~-~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~------g~~ 443 (647)
T PTZ00237 371 TIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLKI-KSSRGYGQTEIGITYLYCYGHINIPYNATGVPSI------FIK 443 (647)
T ss_pred cccccccCcchheEEEecCccCCHHHHHHHHHhcCC-CEEeeechHHhChhhhccCCCCCCCCCCCccCcC------Cce
Confidence 234578999877 899999999999999997 899999999998654322 1 22367777665 789
Q ss_pred eEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCc--ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEec
Q psy8225 388 LIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRA--ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDK 465 (479)
Q Consensus 388 ~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~--~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~ 465 (479)
++++|+ +|+ +++.|+.|||+++ +| ++++.|||++++.+.+.|. ..+|||+|||+|++|+
T Consensus 444 ~~i~d~-~g~----------~~~~ge~GEl~v~----~p~~p~~~~gy~~~~~~~~~~f~----~~~g~~~TGDlg~~d~ 504 (647)
T PTZ00237 444 PSILSE-DGK----------ELNVNEIGEVAFK----LPMPPSFATTFYKNDEKFKQLFS----KFPGYYNSGDLGFKDE 504 (647)
T ss_pred EEEECC-CCC----------CCCCCCceEEEEe----ccCCchhhCceeCCHHHHHHHHh----CCCCEEECCcEEEECC
Confidence 999996 455 5688999999998 54 2789999999877765443 3478999999999999
Q ss_pred CCcEEEecCCCCCC
Q psy8225 466 FQYFYFKDRTGDAC 479 (479)
Q Consensus 466 dG~l~~~GR~~d~~ 479 (479)
||+++|+||+||++
T Consensus 505 dG~l~i~GR~dd~i 518 (647)
T PTZ00237 505 NGYYTIVSRSDDQI 518 (647)
T ss_pred CCeEEEEeccCCEE
Confidence 99999999999974
No 21
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.9e-55 Score=456.73 Aligned_cols=407 Identities=21% Similarity=0.271 Sum_probs=317.8
Q ss_pred cchhHHHHHHHhhcCCCccccEEE---------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT---------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSK 115 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~---------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~ 115 (479)
-|...++|+++++.+|+++|+++. +|| ||.+++.++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 56 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 135 (625)
T TIGR02188 56 LNVSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACAR 135 (625)
T ss_pred EEHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 367789999999999999999862 999 9999999999999999999999999999999999999999999
Q ss_pred cCceeeeecCCcchHHHHHHHHhccceEEEeChhh---------HHHHHHhhccCC-cce-EEecCCCCCCCccCCCccc
Q psy8225 116 IGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL---------SEALTEVKDSIP-GIS-LYAAGTRRKPQAKVLPSTT 184 (479)
Q Consensus 116 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 184 (479)
+|++++|+++.++.+++.+++++++++++|+++.. ...+.+.....+ .+. +++................
T Consensus 136 ~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (625)
T TIGR02188 136 IGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDV 215 (625)
T ss_pred hCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccc
Confidence 99999999999999999999999999999997642 223333333333 232 2322211100000000112
Q ss_pred cccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhh-hhhhhcCCCCCCeEEEeccchhhhh
Q psy8225 185 LLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAI-SGRYQTGLTSDDVVYTTLPLYHTAG 263 (479)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~d~~~~~~pl~h~~g 263 (479)
.+++++........ ......+++++|+|||||||.||||+++|.+++.... .....+++.++|++++..|++|..|
T Consensus 216 ~~~~~~~~~~~~~~---~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g 292 (625)
T TIGR02188 216 WWHDLMAKASAYCE---PEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITG 292 (625)
T ss_pred cHHHHHhhcCCCCC---ceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhc
Confidence 23333332211111 1335678899999999999999999999999865443 3444567889999999999999998
Q ss_pred hHHHHHHHHhcCceEEecCC----CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCCh
Q psy8225 264 GLLGIGQCLLGGSTVVIRSK----FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRP 335 (479)
Q Consensus 264 ~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~ 335 (479)
..+.++.++..|+++++.+. +++..+++.++++++|++.++|++++.|.+.... ....+++||.++ |+++++
T Consensus 293 ~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~ 372 (625)
T TIGR02188 293 HSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINP 372 (625)
T ss_pred cHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCH
Confidence 77778899999999998753 4789999999999999999999999999876543 234578999877 899999
Q ss_pred hhHHHHHHHhCc--ceeeeeccccccCccccc-----CCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcccc
Q psy8225 336 QVWEPFQKRFGL--DRICEFYGATEGNANLMN-----ADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIP 408 (479)
Q Consensus 336 ~~~~~~~~~~~~--~~v~~~YG~tE~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~ 408 (479)
++.+++.+.++. .++++.||+||+++.+.. .+.+++++|+|++ +++++++| ++|+ +
T Consensus 373 ~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~------g~~~~i~d-~~g~----------~ 435 (625)
T TIGR02188 373 EAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFF------GIEPAVVD-EEGN----------P 435 (625)
T ss_pred HHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcC------CceEEEEC-CCCC----------C
Confidence 999999999873 389999999999866542 1345677777665 79999998 4455 4
Q ss_pred cc-CCCCceEEEEeecCCc-ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 409 CK-AEEPGILIGMIKESRA-ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 409 ~~-~~~~Gel~v~~~~~~~-~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++ +|+.|||+++ +| ++++.|||++++.+.+.+ +...+|||+|||+|++|+||+++|+||+||++
T Consensus 436 ~~~~g~~GeL~v~----~p~p~~~~gy~~~~~~~~~~~---~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i 501 (625)
T TIGR02188 436 VEGPGEGGYLVIK----QPWPGMLRTIYGDHERFVDTY---FSPFPGYYFTGDGARRDKDGYIWITGRVDDVI 501 (625)
T ss_pred CCCCCCeEEEEEc----cCCCcccccccCChHHHHHHH---hccCCCEEECCceEEEcCCCcEEEEecccCEE
Confidence 56 7899999998 63 289999999986554433 22347899999999999999999999999974
No 22
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=8.3e-56 Score=453.78 Aligned_cols=401 Identities=20% Similarity=0.181 Sum_probs=313.0
Q ss_pred cccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce
Q psy8225 44 TLPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 44 ~~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 119 (479)
..|.++.++|.+.++++|+++|+++. +|| ||.++++++|++|.++|+++||+|+++++|++++++++|||+++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav 83 (563)
T PLN02860 4 HSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGI 83 (563)
T ss_pred hhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEE
Confidence 45677999999999999999999876 999 99999999999999999999999999999999999999999999999
Q ss_pred eeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhh-ccCCcceEEe-cCCCCCCCccCCCccccccccCCcCCCCC
Q psy8225 120 AAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVK-DSIPGISLYA-AGTRRKPQAKVLPSTTLLDEELPEVSAKS 197 (479)
Q Consensus 120 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (479)
++|+++.++.+++.++++++++++++++.........+. ...+.++.++ .++...............++.........
T Consensus 84 ~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (563)
T PLN02860 84 VAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALGTT 163 (563)
T ss_pred EEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccccc
Confidence 999999999999999999999999999876433332221 2233333222 22111000000000111111111100000
Q ss_pred CcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCce
Q psy8225 198 PTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGST 277 (479)
Q Consensus 198 ~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~ 277 (479)
.. .....++++++++|||||||.||+|+++|+++..........+++..+|++++.+|++|.+|+ ..++.++..|++
T Consensus 164 ~~--~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~~ 240 (563)
T PLN02860 164 EL--DYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSALAMLMVGAC 240 (563)
T ss_pred cc--cCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccH-HHHHHHHHcCce
Confidence 00 123356889999999999999999999999998777666667788999999999999999987 457788999999
Q ss_pred EEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCC--CCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeee
Q psy8225 278 VVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKP--EDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEF 353 (479)
Q Consensus 278 ~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~--~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~ 353 (479)
+++.+.+++..+++.++++++|++.++|+++..|.+..... ...++++|.++ |+++++++.++|++.|+..++++.
T Consensus 241 ~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~ 320 (563)
T PLN02860 241 HVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSA 320 (563)
T ss_pred EEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecC
Confidence 99999999999999999999999999999999988764332 23467899877 889999999999999954489999
Q ss_pred ccccccCcccccCC--C------------------------CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccc
Q psy8225 354 YGATEGNANLMNAD--G------------------------KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCI 407 (479)
Q Consensus 354 YG~tE~~~~~~~~~--~------------------------~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~ 407 (479)
||+||+++.+.... . ...++|+|+| ++++++++++
T Consensus 321 YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~------~~~v~i~~~~------------- 381 (563)
T PLN02860 321 YGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAP------HVELKIGLDE------------- 381 (563)
T ss_pred CCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccC------CcEEEEecCC-------------
Confidence 99999876543211 0 0113455544 7999988754
Q ss_pred cccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 408 PCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 408 ~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|+.|||+++ |+ +++.|||++++.+.+.+. .+|||+|||+|++|+||+++|.||+||++
T Consensus 382 ---~g~~Gel~v~----g~-~~~~GY~~~~~~t~~~~~-----~~g~~~TGDl~~~d~dG~l~~~GR~~d~i 440 (563)
T PLN02860 382 ---SSRVGRILTR----GP-HVMLGYWGQNSETASVLS-----NDGWLDTGDIGWIDKAGNLWLIGRSNDRI 440 (563)
T ss_pred ---CCceeEEEEe----cC-cccccccCCccccchhcc-----CCCeEEccceEEEcCCCCEEEeeccccee
Confidence 3568999998 88 899999999877766543 37999999999999999999999999985
No 23
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-56 Score=465.01 Aligned_cols=403 Identities=20% Similarity=0.190 Sum_probs=306.0
Q ss_pred cchhHHHHHHHhhcCCCccccEE-----------------------------E-Eeh-hhHHHHHHHHHHHHHcCCCCCC
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKY-----------------------------T-VTF-QVEDHSNRIANFFKSKGLQRGD 94 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~-----------------------------~-~Ty-~l~~~~~~la~~L~~~gi~~gd 94 (479)
..++.++|.++++.+|+++|+.+ . +|| ||.++++++|++|.++|+++||
T Consensus 68 ~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd 147 (700)
T PTZ00216 68 GPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGS 147 (700)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 35799999999999999999986 2 899 9999999999999999999999
Q ss_pred EEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhcc--CCcceEEecCCC
Q psy8225 95 AVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDS--IPGISLYAAGTR 172 (479)
Q Consensus 95 ~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 172 (479)
+|+|+++|++||+++++||+++|++++|+++.++.+++.+++++++++++|++......+...... .+...+++++..
T Consensus 148 ~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~ 227 (700)
T PTZ00216 148 NVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSL 227 (700)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999987765544433322 234455554432
Q ss_pred CCCCccCCCccccccccCCcCCCC-CCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhc----C-C
Q psy8225 173 RKPQAKVLPSTTLLDEELPEVSAK-SPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQT----G-L 246 (479)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~----~-~ 246 (479)
.............|++++..+... ..........++++++|+|||||||.||||++||+++++.+......+ . +
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~ 307 (700)
T PTZ00216 228 PASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPP 307 (700)
T ss_pred ccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCC
Confidence 110000111233455544333110 000101334678999999999999999999999999998776655433 2 3
Q ss_pred CCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHH-------HHHHhcccEEEEehHHHHHHhcCCCC--
Q psy8225 247 TSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWK-------DCIKYNCTVAQYIGEMCRYLLAVPEK-- 317 (479)
Q Consensus 247 ~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~-------~i~~~~~t~~~~~p~~l~~l~~~~~~-- 317 (479)
..+|++++.+|++|.+++.. ....+..|+++++. ++..+++ .++++++|++.++|.+++.+.+....
T Consensus 308 ~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~ 383 (700)
T PTZ00216 308 EEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKL 383 (700)
T ss_pred CCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHH
Confidence 67899999999999998744 34457778877763 3444444 68889999999999999877542100
Q ss_pred -----------------------CCC----------------CCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 318 -----------------------PED----------------TQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 318 -----------------------~~~----------------~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
... ..+++|.++ |+++++++.++++..++ .+++.||+
T Consensus 384 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~--~l~~~YG~ 461 (700)
T PTZ00216 384 PPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG--MVIQGWGL 461 (700)
T ss_pred hccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh--hHhhccCc
Confidence 000 015788877 88899999887777665 89999999
Q ss_pred cccCccccc---CCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccc
Q psy8225 357 TEGNANLMN---ADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGY 433 (479)
Q Consensus 357 tE~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY 433 (479)
||+++.+.. .+..++++|+|++ +++++++|++.... .++++..|||+++ || ++|.||
T Consensus 462 TEt~~~~~~~~~~~~~~~svG~p~~------g~evkI~d~~~~~~---------~~~~~~~GEL~vr----G~-~v~~GY 521 (700)
T PTZ00216 462 TETVCCGGIQRTGDLEPNAVGQLLK------GVEMKLLDTEEYKH---------TDTPEPRGEILLR----GP-FLFKGY 521 (700)
T ss_pred ccccccccccCCCCCCCCCcCCcCC------CeEEEEeechhhcc---------CCCCCCCceEEEc----CC-cccchh
Confidence 999765432 1234567777665 89999998653221 2345668999998 88 999999
Q ss_pred cCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 434 ADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|++++.+++.|. .+|||+|||+|++|+||+|+|+||+||++
T Consensus 522 ~~~pe~T~~~f~-----~dGw~~TGDig~~d~dG~l~i~GR~kd~i 562 (700)
T PTZ00216 522 YKQEELTREVLD-----EDGWFHTGDVGSIAANGTLRIIGRVKALA 562 (700)
T ss_pred cCChhHhhhhcc-----ccCCeeccceEEEcCCCcEEEEEehHhhe
Confidence 999998887764 27899999999999999999999999974
No 24
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.5e-55 Score=445.79 Aligned_cols=406 Identities=24% Similarity=0.343 Sum_probs=330.3
Q ss_pred cchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSK-GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~-gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
+.++.++|.+.++.+|+++|+++. +|| ||.+++.++|..|.+. |+++||+|+++++|+++++++++||+++|+++
T Consensus 9 ~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 88 (546)
T PRK08314 9 ETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVV 88 (546)
T ss_pred CCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEE
Confidence 466899999999999999999988 999 9999999999999999 99999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCC-CC---c--------------cCCCc
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRK-PQ---A--------------KVLPS 182 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~--------------~~~~~ 182 (479)
+|++|.++.+++.++++.+++++++++.+....+...........+++...... .. . ....+
T Consensus 89 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (546)
T PRK08314 89 VPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAPGG 168 (546)
T ss_pred eecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccccccccc
Confidence 999999999999999999999999999877665554433222111221110000 00 0 00011
Q ss_pred cccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhh
Q psy8225 183 TTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTA 262 (479)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~ 262 (479)
...+++.+...... .......+++++++|||||||.||+|+++|++++..+......+++..+|++++.+|++|.+
T Consensus 169 ~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 244 (546)
T PRK08314 169 VVAWKEALAAGLAP----PPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLPLFHVT 244 (546)
T ss_pred cccHHHHhcccCCC----CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcCchHHH
Confidence 12233322221111 11334678999999999999999999999999998888777778889999999999999999
Q ss_pred hhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHH
Q psy8225 263 GGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEP 340 (479)
Q Consensus 263 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~ 340 (479)
|+...++.++..|+++++.+.+++..+++.++++++|++.++|++++.++.........++++|.++ |+++++++.++
T Consensus 245 g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~ 324 (546)
T PRK08314 245 GMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEAVAER 324 (546)
T ss_pred HHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHHHHHH
Confidence 9888888999999999999999999999999999999999999999998877655555678899877 88899999999
Q ss_pred HHHHhCcceeeeeccccccCcccccCC---CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceE
Q psy8225 341 FQKRFGLDRICEFYGATEGNANLMNAD---GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGIL 417 (479)
Q Consensus 341 ~~~~~~~~~v~~~YG~tE~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel 417 (479)
+.+.++. ++++.||+||++..+...+ ...+++|.|++ +++++++|+++++ +++.|+.|||
T Consensus 325 ~~~~~~~-~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~------g~~~~i~d~~~~~----------~~~~g~~Gel 387 (546)
T PRK08314 325 LKELTGL-DYVEGYGLTETMAQTHSNPPDRPKLQCLGIPTF------GVDARVIDPETLE----------ELPPGEVGEI 387 (546)
T ss_pred HHHHcCC-cEEecccccccccceecCCCcCCCCCccCcccC------CeEEEEEeCCCCc----------CCCCCCceEE
Confidence 9999998 8999999999986554322 23456677655 7999999987776 5688999999
Q ss_pred EEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 418 IGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 418 ~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++ |+ +++.||+++++.+++.|.. .++++||+|||+|++|++|++++.||+||++
T Consensus 388 ~v~----g~-~~~~gY~~~~~~t~~~f~~--~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i 442 (546)
T PRK08314 388 VVH----GP-QVFKGYWNRPEATAEAFIE--IDGKRFFRTGDLGRMDEEGYFFITDRLKRMI 442 (546)
T ss_pred EEE----CC-chhccccCChhHhhhhhhh--cCCCceEecCCEEEEcCCCcEEEEecchhhE
Confidence 998 77 8999999998777765532 1345799999999999999999999999975
No 25
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-54 Score=451.84 Aligned_cols=405 Identities=20% Similarity=0.240 Sum_probs=315.6
Q ss_pred chhHHHHHHHhhcCCCccccEEE---------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKI 116 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~ 116 (479)
+...++|+++++.+|+++|+++. +|| ||.+++.++|+.|+++|+++||+|+++++|++++++++|||+++
T Consensus 67 n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~ 146 (637)
T PRK00174 67 NVSYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARI 146 (637)
T ss_pred EHHHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 44578899999999999999962 999 99999999999999999999999999999999999999999999
Q ss_pred CceeeeecCCcchHHHHHHHHhccceEEEeChhhH---------HHHHHhhccCCcce-EEecCCCCCCCccCC-Ccccc
Q psy8225 117 GVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS---------EALTEVKDSIPGIS-LYAAGTRRKPQAKVL-PSTTL 185 (479)
Q Consensus 117 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 185 (479)
|++++|+++.++.+++.+++++++++++|+++... ..+.+.....+.+. +++...... ..... .....
T Consensus 147 Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 225 (637)
T PRK00174 147 GAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGG-DVDWVEGRDLW 225 (637)
T ss_pred CCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCC-CcCcCCCCccc
Confidence 99999999999999999999999999999976432 23333333333333 222221110 00000 01122
Q ss_pred ccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhh-hhhhhcCCCCCCeEEEeccchhhhhh
Q psy8225 186 LDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAI-SGRYQTGLTSDDVVYTTLPLYHTAGG 264 (479)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~d~~~~~~pl~h~~g~ 264 (479)
++++......... ......+++++|+|||||||.||||+++|++++.... .....++++.+|++++..|++|..+.
T Consensus 226 ~~~~~~~~~~~~~---~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 302 (637)
T PRK00174 226 WHELVAGASDECE---PEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGH 302 (637)
T ss_pred HHHHHhhcCCCCC---ccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhh
Confidence 3333322111111 1234568899999999999999999999999875443 33445678889999999999999988
Q ss_pred HHHHHHHHhcCceEEecCC----CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCChh
Q psy8225 265 LLGIGQCLLGGSTVVIRSK----FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRPQ 336 (479)
Q Consensus 265 ~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~~ 336 (479)
.+.++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|++.... ....+++||.++ |++++++
T Consensus 303 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~ 382 (637)
T PRK00174 303 SYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPE 382 (637)
T ss_pred HHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHH
Confidence 7788899999999998652 4789999999999999999999999999876543 234578999876 8999999
Q ss_pred hHHHHHHHhCc--ceeeeeccccccCcccccC-----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccc
Q psy8225 337 VWEPFQKRFGL--DRICEFYGATEGNANLMNA-----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPC 409 (479)
Q Consensus 337 ~~~~~~~~~~~--~~v~~~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~ 409 (479)
+.+++.+.++. .++++.||+||+++.+... ..+++++|+|++ +++++++|++ |+ ++
T Consensus 383 ~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~------g~~~~i~d~~-g~----------~~ 445 (637)
T PRK00174 383 AWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLP------GIQPAVVDEE-GN----------PL 445 (637)
T ss_pred HHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCC------CceEEEECCC-CC----------CC
Confidence 99999998872 3899999999998655421 234567777665 7999999854 44 56
Q ss_pred cCCCCceEEEEeecCCc-ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 410 KAEEPGILIGMIKESRA-ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 410 ~~~~~Gel~v~~~~~~~-~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+.|+.|||+++ || ++++.|||++++.+.+. +|...+|||+|||+|++|+||+++|+||+||++
T Consensus 446 ~~g~~Gel~v~----g~~p~~~~gy~~~~~~~~~~---~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~i 509 (637)
T PRK00174 446 EGGEGGNLVIK----DPWPGMMRTIYGDHERFVKT---YFSTFKGMYFTGDGARRDEDGYYWITGRVDDVL 509 (637)
T ss_pred CCCCcEEEEEc----CCCCcccccccCCHHHHHHh---hhcCCCCEEECCceEEEcCCCcEEEEEecccEE
Confidence 88999999998 63 28999999998655433 233447899999999999999999999999985
No 26
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.6e-55 Score=453.12 Aligned_cols=404 Identities=18% Similarity=0.194 Sum_probs=304.6
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWL 111 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~l 111 (479)
...|+.++|.+.++.+|+++|+.+. +|| |+.++++++|++|.+.|+++||+|+|+++|++||+++++
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3468999999999999999998631 699 999999999999999999999999999999999999999
Q ss_pred HhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhH-HHHHHhhccCCcce-EEecCCCCCCCc----cCCCcccc
Q psy8225 112 GLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS-EALTEVKDSIPGIS-LYAAGTRRKPQA----KVLPSTTL 185 (479)
Q Consensus 112 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~ 185 (479)
||+++|++++|+++.++.+++.+++++++++++|++.... ..+.......+.++ +++.+....... ........
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 199 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYS 199 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEE
Confidence 9999999999999999999999999999999999987543 23322222233333 333322110000 00011234
Q ss_pred ccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhh-----cCCCCCCeEEEeccchh
Q psy8225 186 LDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQ-----TGLTSDDVVYTTLPLYH 260 (479)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~-----~~~~~~d~~~~~~pl~h 260 (479)
|++++..+....... ....++++++|+|||||||.||||++||+++...+...... ..+..+|++++.+|++|
T Consensus 200 ~~~~~~~~~~~~~~~--~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H 277 (660)
T PLN02430 200 WIDFLHMGKENPSET--NPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAH 277 (660)
T ss_pred HHHHHHhhccCCCCC--CCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHH
Confidence 455443332111111 23357899999999999999999999999998876654321 24678899999999999
Q ss_pred hhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCC------------------------
Q psy8225 261 TAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPE------------------------ 316 (479)
Q Consensus 261 ~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~------------------------ 316 (479)
.++.... +.++..|+++++... ++..+++.+.++++|++.++|.+++.+.+...
T Consensus 278 ~~~~~~~-~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (660)
T PLN02430 278 ILDRMIE-EYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAW 355 (660)
T ss_pred HHHHHHH-HHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 9998654 456788999887643 77889999999999999999999987654200
Q ss_pred -------C--CC-CC-----------CCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccc-cCC---CC
Q psy8225 317 -------K--PE-DT-----------QHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLM-NAD---GK 369 (479)
Q Consensus 317 -------~--~~-~~-----------l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~-~~~---~~ 369 (479)
. .. .+ -.++|.++ |+++++++.+.+ +.++...+++.||+||+++.++ +.+ ..
T Consensus 356 ~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~-~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~ 434 (660)
T PLN02430 356 MNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFL-RVTSCAFVVQGYGLTETLGPTTLGFPDEMCM 434 (660)
T ss_pred HhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHH-HHhcCCCeeeecchhhhhhceEeeccccCCC
Confidence 0 00 00 15788877 788999986554 5555437999999999876543 221 24
Q ss_pred CCcccccCccccCCCceeeEEeC-CCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhc
Q psy8225 370 VGAVGYIPYIAIPFYPVGLIKCD-PETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVY 448 (479)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~~~i~d-~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~ 448 (479)
++++|.|.+ ++++++.| ++.+.. +++.+..|||+++ || ++|.|||++++.+++.+.
T Consensus 435 ~gsvG~p~~------~~evki~d~~~~g~~---------~~~~~~~GEi~vr----g~-~v~~GY~~~~e~t~~~~~--- 491 (660)
T PLN02430 435 LGTVGAPAV------YNELRLEEVPEMGYD---------PLGEPPRGEICVR----GK-CLFSGYYKNPELTEEVMK--- 491 (660)
T ss_pred CCCccCCCC------ceEEEEEEcCCcCcc---------cCCCCCcceEEec----CC-CccccccCChHHhhhhhh---
Confidence 678888765 78888876 233321 3455668999998 88 999999999988887664
Q ss_pred cCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 449 SHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 449 ~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|||+|||+|++|+||+|+|.||+||++
T Consensus 492 ---dGw~~TGDig~~d~dG~l~i~gR~kd~i 519 (660)
T PLN02430 492 ---DGWFHTGDIGEILPNGVLKIIDRKKNLI 519 (660)
T ss_pred ---ccceeccceEEECCCCcEEEEEcccccE
Confidence 8999999999999999999999999974
No 27
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.3e-54 Score=443.77 Aligned_cols=395 Identities=21% Similarity=0.250 Sum_probs=322.1
Q ss_pred cchhHHHHHHHhhcCCCccccEE--------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKY--------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSK 115 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~--------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~ 115 (479)
..++.++|++.++.+|+++|+++ . +|| ||.++++++|++|.+.|+++||+|+++++|++++++++|||++
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~ 102 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSR 102 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 45689999999999999999986 3 999 9999999999999999999999999999999999999999999
Q ss_pred cCceeeeecCCcchHHHHHHHHhccceEEEeChhh-----HHHHHHhhccCCcce-EEecCCCCCCCccCCCcccccccc
Q psy8225 116 IGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL-----SEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEE 189 (479)
Q Consensus 116 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 189 (479)
+|++++|++|.++.+++.++++.++++++++++.. .+.+.++....+.++ ++..+... ...+.++
T Consensus 103 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 173 (547)
T PRK13295 103 IGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDG---------ADSFEAL 173 (547)
T ss_pred cCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCC---------ccCHHHH
Confidence 99999999999999999999999999999998753 222333333333333 22222111 1112222
Q ss_pred CCcC-----CCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhh
Q psy8225 190 LPEV-----SAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGG 264 (479)
Q Consensus 190 ~~~~-----~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~ 264 (479)
+... ..............+++++++|||||||.||+|+++|+++...+......+++..++++++.+|++|..|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~ 253 (547)
T PRK13295 174 LITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGF 253 (547)
T ss_pred hhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhH
Confidence 2111 00001111123456889999999999999999999999999888877777888999999999999999998
Q ss_pred HHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHH
Q psy8225 265 LLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQ 342 (479)
Q Consensus 265 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~ 342 (479)
+..++.++..|+++++.+.+++..+++.++++++|++.++|+++..|..........+++||.++ |+++++++.+++.
T Consensus 254 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~ 333 (547)
T PRK13295 254 MYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERAR 333 (547)
T ss_pred HHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHH
Confidence 88889999999999999889999999999999999999999999999887665556678899877 8999999999999
Q ss_pred HHhCcceeeeeccccccCcccccCCC-----CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceE
Q psy8225 343 KRFGLDRICEFYGATEGNANLMNADG-----KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGIL 417 (479)
Q Consensus 343 ~~~~~~~v~~~YG~tE~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel 417 (479)
+.++. ++++.||+||++........ ..+++|+|.+ +++++++|++ +. +++.|+.|||
T Consensus 334 ~~~~~-~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~------~~~v~i~d~~-~~----------~~~~g~~Gel 395 (547)
T PRK13295 334 AALGA-KIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLP------GVEVRVVDAD-GA----------PLPAGQIGRL 395 (547)
T ss_pred HHhCC-CeEEeccCCCCCCeeeccCCCcchhccCccccccC------CcEEEEECCC-CC----------CCCCCCCCeE
Confidence 99988 99999999999865543221 2345566554 7999999865 44 5688999999
Q ss_pred EEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 418 IGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 418 ~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++ |+ +++.||+++++.+... .+|||+|||+|++|++|++++.||.||++
T Consensus 396 ~v~----g~-~~~~gY~~~~~~t~~~-------~~g~~~TGD~~~~~~~g~l~~~gR~~~~i 445 (547)
T PRK13295 396 QVR----GC-SNFGGYLKRPQLNGTD-------ADGWFDTGDLARIDADGYIRISGRSKDVI 445 (547)
T ss_pred EEE----cC-cccccccCCccccccC-------CCCCeecceEEEEcCCceEEEEeccCCeE
Confidence 998 77 8999999987766532 27899999999999999999999999974
No 28
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.5e-54 Score=442.65 Aligned_cols=396 Identities=22% Similarity=0.284 Sum_probs=326.0
Q ss_pred chhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.++.+++.+++..+|+++|+++. +|| ||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 23 ~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~ 102 (537)
T PLN02246 23 LPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVT 102 (537)
T ss_pred CcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEE
Confidence 45889999999999999999873 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcc
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTE 200 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (479)
+|++|.++.+++..+++.++++++|++......+...... +.+.++.++... .....+.++........+
T Consensus 103 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~~-- 172 (537)
T PLN02246 103 TTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED-DGVTVVTIDDPP-------EGCLHFSELTQADENELP-- 172 (537)
T ss_pred ecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc-CCceEEEeCCCC-------CCceeHHHHhcCCCCCCC--
Confidence 9999999999999999999999999988776665554322 234444443221 111222222221111111
Q ss_pred cccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh----hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCc
Q psy8225 201 DIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY----QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGS 276 (479)
Q Consensus 201 ~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~ 276 (479)
.....++++++++|||||||.||+|+++|+++......... .+++..+|++++.+|++|.+++...++.++..|+
T Consensus 173 -~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~ 251 (537)
T PLN02246 173 -EVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGA 251 (537)
T ss_pred -CCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCC
Confidence 12345788999999999999999999999999877654432 4668899999999999999998777788899999
Q ss_pred eEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeec
Q psy8225 277 TVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFY 354 (479)
Q Consensus 277 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~Y 354 (479)
++++.+.+++..+++.++++++|++.++|+++..|.+........++++|.++ |+++++++.+.+++.++...+++.|
T Consensus 252 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~Y 331 (537)
T PLN02246 252 AILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGY 331 (537)
T ss_pred EEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccc
Confidence 99999999999999999999999999999999999887665555678899877 8889999999999999655899999
Q ss_pred cccccCcccccC--------CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCc
Q psy8225 355 GATEGNANLMNA--------DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRA 426 (479)
Q Consensus 355 G~tE~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~ 426 (479)
|+||++.+++.. ..+++++|+|++ +++++++|+++++ +++.|+.|||+++ |+
T Consensus 332 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~~~~~----------~~~~g~~Gel~v~----g~ 391 (537)
T PLN02246 332 GMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVR------NAELKIVDPETGA----------SLPRNQPGEICIR----GP 391 (537)
T ss_pred cccccCcccccccccCCCCccccCCccccccC------CcEEEEecCCCCC----------cCCCCCceEEEEE----CC
Confidence 999998654321 234566777665 7999999977766 6689999999998 77
Q ss_pred ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 427 ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 427 ~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.++.||+++++.+...++ .+|||+|||+|++|+||++++.||.||++
T Consensus 392 -~~~~GY~~~~~~~~~~~~-----~~~~~~TGD~~~~~~~g~l~~~GR~dd~i 438 (537)
T PLN02246 392 -QIMKGYLNDPEATANTID-----KDGWLHTGDIGYIDDDDELFIVDRLKELI 438 (537)
T ss_pred -chhccccCCchhhhhccc-----CCCCeeecceEEEeCCCeEEEEecccceE
Confidence 899999998877765543 37899999999999999999999999975
No 29
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-54 Score=444.29 Aligned_cols=398 Identities=24% Similarity=0.295 Sum_probs=322.4
Q ss_pred cchhHHHHHHHhh-cCCCccccEEE-------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q psy8225 46 PTYARPLFVRTIR-EVPMTGAYKYT-------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKI 116 (479)
Q Consensus 46 ~~~l~~~l~~~~~-~~p~~~a~~~~-------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~ 116 (479)
-+.+.+++++++. .+|+++|+.+. +|| ||.++++++|.+|.++|+++||+|+++++|++++++++|||+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~ 121 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKN 121 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 3667789999887 57999999863 999 99999999999999999999999999999999999999999999
Q ss_pred CceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCcCCC
Q psy8225 117 GVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSA 195 (479)
Q Consensus 117 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (479)
|++++|+++.++.+++.++++.++++++|++......... ...+..+ ++..+.... .......+.+++.....
T Consensus 122 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 195 (570)
T PRK04319 122 GAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLPSLKHVLLVGEDVE----EGPGTLDFNALMEQASD 195 (570)
T ss_pred CcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCCCceEEEEECCCcC----CCcCccCHHHHHhhcCC
Confidence 9999999999999999999999999999998765433221 1233322 333322110 11122334443332221
Q ss_pred CCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcC
Q psy8225 196 KSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGG 275 (479)
Q Consensus 196 ~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G 275 (479)
... .....++++++++|||||||.||+|+++|+++...+......+++..+|++++..|++|.+|....++.++..|
T Consensus 196 ~~~---~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G 272 (570)
T PRK04319 196 EFD---IEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNG 272 (570)
T ss_pred cCC---ccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcC
Confidence 111 12345678999999999999999999999999988877777788899999999999999999888888999999
Q ss_pred ceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCChhhHHHHHHHhCccee
Q psy8225 276 STVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRI 350 (479)
Q Consensus 276 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v 350 (479)
+++++.. .+++..+++.|+++++|++.++|++++.|.+.... ....+++||.++ |+++++++.+++++.++. ++
T Consensus 273 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~-~i 351 (570)
T PRK04319 273 ATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVFGL-PI 351 (570)
T ss_pred ceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHhCC-Ce
Confidence 9998865 68999999999999999999999999999876432 234578899877 889999999999999998 89
Q ss_pred eeeccccccCccccc-C---CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCc
Q psy8225 351 CEFYGATEGNANLMN-A---DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRA 426 (479)
Q Consensus 351 ~~~YG~tE~~~~~~~-~---~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~ 426 (479)
++.||+||++..+.. . ...++++|+|+| +++++++|++ +. ++++|+.|||++++. ++
T Consensus 352 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~------g~~~~i~d~~-~~----------~~~~g~~Gel~i~~~--~~ 412 (570)
T PRK04319 352 HDNWWMTETGGIMIANYPAMDIKPGSMGKPLP------GIEAAIVDDQ-GN----------ELPPNRMGNLAIKKG--WP 412 (570)
T ss_pred EeceeecccCCEEEecCCCCCCCCCcCcCCCC------CCEEEEECCC-CC----------CCCCCCceEEEEcCC--CC
Confidence 999999999865432 1 235677787665 7899999855 33 458899999999831 26
Q ss_pred ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 427 ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 427 ~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++.||+++++.+.+.++ +|||+|||+|++|+||++++.||+||++
T Consensus 413 -~~~~GY~~~~~~~~~~~~------~gw~~TGDl~~~~~~g~l~~~GR~~d~i 458 (570)
T PRK04319 413 -SMMRGIWNNPEKYESYFA------GDWYVSGDSAYMDEDGYFWFQGRVDDVI 458 (570)
T ss_pred -hHHhHhcCCHHHhhhhhc------CCceEeCcEEEECCCeeEEEEecCCCEE
Confidence 899999999888876654 7899999999999999999999999974
No 30
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.4e-54 Score=446.62 Aligned_cols=393 Identities=18% Similarity=0.180 Sum_probs=303.9
Q ss_pred ccchhHHHHHHHhhcCCCccccEE-------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKY-------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSK 115 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~-------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~ 115 (479)
.+.++.++|++++..+|+++|+++ . +|| ||.++++++|++|.+.|+++||+|+++++|+++|++++|||++
T Consensus 37 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~ 116 (614)
T PRK08180 37 YPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMY 116 (614)
T ss_pred cCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence 356789999999999999999985 2 999 9999999999999999999999999999999999999999999
Q ss_pred cCceeeeecCCcc-----hHHHHHHHHhccceEEEeChh--hHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccc
Q psy8225 116 IGVVAAFINTNQR-----QHILIHSIKVAECKAIIYGAE--LSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDE 188 (479)
Q Consensus 116 ~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (479)
+|++++|++|.++ .+++.+++++++++++|++.. ....+..... ....++....... ......+++
T Consensus 117 ~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~-----~~~~~~~~~ 189 (614)
T PRK08180 117 AGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP--ADVEVVAVRGAVP-----GRAATPFAA 189 (614)
T ss_pred cCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc--CCceEEEecCCCC-----CcccccHHH
Confidence 9999999999988 799999999999999999753 2222221111 1223333221110 001123444
Q ss_pred cCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCC--CCCeEEEeccchhhhhhHH
Q psy8225 189 ELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLT--SDDVVYTTLPLYHTAGGLL 266 (479)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~--~~d~~~~~~pl~h~~g~~~ 266 (479)
++................++++++|+|||||||.||||++||+++...+......+... .++++++.+|++|.+|+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~ 269 (614)
T PRK08180 190 LLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNH 269 (614)
T ss_pred HhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHH
Confidence 43321111000001234568999999999999999999999999998877766655553 5689999999999999877
Q ss_pred HHHHHHhcCceEEecC-CCCh---hHHHHHHHHhcccEEEEehHHHHHHhcCCCC----CCCCCCceeEEE--ecCCChh
Q psy8225 267 GIGQCLLGGSTVVIRS-KFSA---SNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK----PEDTQHSVKMMI--GNGLRPQ 336 (479)
Q Consensus 267 ~~~~~l~~G~~~v~~~-~~~~---~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~----~~~~l~~lr~~~--G~~l~~~ 336 (479)
.++.++..|+++++.+ .+++ ..+++.++++++|++.++|++++.|++.... ....+++||.++ |++++++
T Consensus 270 ~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~ 349 (614)
T PRK08180 270 NLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQD 349 (614)
T ss_pred HHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHH
Confidence 8888999999999876 3444 4678889999999999999999888764321 223468999887 8889999
Q ss_pred hHHHHHHH----hCc-ceeeeeccccccCccccc---CCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcccc
Q psy8225 337 VWEPFQKR----FGL-DRICEFYGATEGNANLMN---ADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIP 408 (479)
Q Consensus 337 ~~~~~~~~----~~~-~~v~~~YG~tE~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~ 408 (479)
+.+++.+. +|. ..+++.||+||++++++. ...+++++|+|+| +++++++|+
T Consensus 350 ~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~p------g~~v~i~d~--------------- 408 (614)
T PRK08180 350 VWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGPLSRAGNIGLPAP------GCEVKLVPV--------------- 408 (614)
T ss_pred HHHHHHHHHHhhcCCCceeeeeecccccCCceEecccccCCCCcccCccC------CcEEEEecC---------------
Confidence 99999875 342 279999999999865542 2345678888765 788888763
Q ss_pred ccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEE----ecCCcEEEecCCCCC
Q psy8225 409 CKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIK----DKFQYFYFKDRTGDA 478 (479)
Q Consensus 409 ~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~----d~dG~l~~~GR~~d~ 478 (479)
|..|||+++ |+ ++|.|||++++.+.+.|+ .+|||+|||+|++ |+||+|+|+||+||+
T Consensus 409 ---~~~GEi~vr----g~-~v~~GY~~~p~~t~~~~~-----~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~ 469 (614)
T PRK08180 409 ---GGKLEVRVK----GP-NVTPGYWRAPELTAEAFD-----EEGYYRSGDAVRFVDPADPERGLMFDGRIAED 469 (614)
T ss_pred ---CCCcEEEEe----cC-ccchhhcCChhHhHhhcc-----cCCceeccceEEecCCcCCCCceEEecchhhh
Confidence 236999998 88 899999999888877664 3799999999999 468999999999875
No 31
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.4e-54 Score=446.80 Aligned_cols=409 Identities=20% Similarity=0.220 Sum_probs=313.2
Q ss_pred cchhHHHHHHHhhcCCCccccEEE---------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT---------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSK 115 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~---------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~ 115 (479)
.|...++|+++++.+|+++|+++. +|| ||.+++.++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 52 ~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 131 (629)
T PRK10524 52 TNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACAR 131 (629)
T ss_pred eeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 366789999999999999999861 999 9999999999999999999999999999999999999999999
Q ss_pred cCceeeeecCCcchHHHHHHHHhccceEEEeChhh---------HHHHHHhhccC--CcceEEecCCCCCCCccCCCccc
Q psy8225 116 IGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL---------SEALTEVKDSI--PGISLYAAGTRRKPQAKVLPSTT 184 (479)
Q Consensus 116 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 184 (479)
+|++++|+++.++.+++.+++++++++++|+++.. .+.+.++.... ....++++...............
T Consensus 132 ~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 211 (629)
T PRK10524 132 IGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRDV 211 (629)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCCcc
Confidence 99999999999999999999999999999996531 22333332222 12233333321100000000112
Q ss_pred cccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHh-hhhhhhcCCCCCCeEEEeccchhhhh
Q psy8225 185 LLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMA-ISGRYQTGLTSDDVVYTTLPLYHTAG 263 (479)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~-~~~~~~~~~~~~d~~~~~~pl~h~~g 263 (479)
.+.++.......... ......+++++++|||||||.||||+++|.+++... ......++++++|++++..|++|..+
T Consensus 212 ~~~~~~~~~~~~~~~--~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 289 (629)
T PRK10524 212 DYATLRAQHLGARVP--VEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVG 289 (629)
T ss_pred cHHHHHhcCCCCCCC--ceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeecc
Confidence 233332221111111 022356889999999999999999999999875443 33444567889999999999999988
Q ss_pred hHHHHHHHHhcCceEEecC----CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCCh
Q psy8225 264 GLLGIGQCLLGGSTVVIRS----KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRP 335 (479)
Q Consensus 264 ~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~ 335 (479)
..+.++.++..|+++++.+ .+++..+++.++++++|++.++|++++.|.+.... ...++++||.++ |+++++
T Consensus 290 ~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~ 369 (629)
T PRK10524 290 HSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDE 369 (629)
T ss_pred chHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCH
Confidence 7777889999999998865 34788999999999999999999999998876432 334578999877 899999
Q ss_pred hhHHHHHHHhCcceeeeeccccccCccccc-C------CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcccc
Q psy8225 336 QVWEPFQKRFGLDRICEFYGATEGNANLMN-A------DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIP 408 (479)
Q Consensus 336 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~-~------~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~ 408 (479)
++.+++.+.++. ++++.||+||++..+.. . ..+++++|+|++ +++++++|+++|+ +
T Consensus 370 ~~~~~~~~~~~~-~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~------g~~~~i~d~~~g~----------~ 432 (629)
T PRK10524 370 PTASWISEALGV-PVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMY------GYNVKLLNEVTGE----------P 432 (629)
T ss_pred HHHHHHHHhcCC-CeEeccccccccchhhcCCCCcccCcCCCCCcccCcC------CceEEEEeCCCCC----------C
Confidence 999999999998 89999999999843321 1 223466677655 7999999975666 5
Q ss_pred ccCCCCceEEEEeecCCc--ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 409 CKAEEPGILIGMIKESRA--ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 409 ~~~~~~Gel~v~~~~~~~--~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+.|+.|||+++ || .+++.|||++++...+.+-..+ ++|||+|||+|++|+||+++|+||.||++
T Consensus 433 ~~~g~~Gel~i~----gp~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~TGDl~~~d~dG~l~i~GR~dd~i 499 (629)
T PRK10524 433 CGPNEKGVLVIE----GPLPPGCMQTVWGDDDRFVKTYWSLF--GRQVYSTFDWGIRDADGYYFILGRTDDVI 499 (629)
T ss_pred CCCCCcEEEEEc----CCCChhhcCCccCChHHHHHhhhccC--CCcEEEcCCcEEEcCCCcEEEEEEecCeE
Confidence 788999999998 55 2578899998754433221111 36899999999999999999999999974
No 32
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2.4e-54 Score=442.67 Aligned_cols=393 Identities=20% Similarity=0.209 Sum_probs=311.3
Q ss_pred HHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 50 RPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKS-KGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 50 ~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
..++.+ ..+|+++|+++. +|| ||.++++++|++|++ .|+++||+|+++++|++++++++|||+++|++++|
T Consensus 44 ~~l~~~--~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~ 121 (560)
T PLN02574 44 SFIFSH--HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTT 121 (560)
T ss_pred HHHhcC--cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeC
Confidence 345554 678999999975 999 999999999999999 89999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
++|..+.+++.++++.+++++++++.+....+... ...++.+........ .......+.+++........ .
T Consensus 122 l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~ 192 (560)
T PLN02574 122 MNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL-----GVPVIGVPENYDFDS-KRIEFPKFYELIKEDFDFVP---K 192 (560)
T ss_pred cCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc-----CCcEEecCccccccc-CccCcccHHHHhhcCCcccc---c
Confidence 99999999999999999999999988765544321 122222211100000 00111223333322211111 1
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh----hcC-CCCCCeEEEeccchhhhhhHHHHHHHHhcCce
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY----QTG-LTSDDVVYTTLPLYHTAGGLLGIGQCLLGGST 277 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~----~~~-~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~ 277 (479)
....++++++++|||||||.||||+++|+++...+..... ... ...++++++.+|++|.+|+...++.++..|++
T Consensus 193 ~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 272 (560)
T PLN02574 193 PVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGST 272 (560)
T ss_pred CCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCE
Confidence 2345688999999999999999999999999887665432 122 23567889999999999987777788889999
Q ss_pred EEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC-CCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeec
Q psy8225 278 VVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK-PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFY 354 (479)
Q Consensus 278 ~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~-~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~Y 354 (479)
+++.+.+++..+++.++++++|++..+|++++.|.+.... ....++++|.++ |+++++++++++.+.++...+++.|
T Consensus 273 ~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~Y 352 (560)
T PLN02574 273 IVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGY 352 (560)
T ss_pred EEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecc
Confidence 9999999999999999999999999999999999887543 334578888876 7899999999999998544899999
Q ss_pred cccccCcccccC-----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccc
Q psy8225 355 GATEGNANLMNA-----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESH 429 (479)
Q Consensus 355 G~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~ 429 (479)
|+||++.++... ..+++++|.+.+ +++++|+|+++++ +++.|+.|||+++ |+ ++
T Consensus 353 G~tE~~~~~~~~~~~~~~~~~~~vG~~~~------~~~v~i~d~~~g~----------~~~~g~~Gei~v~----g~-~~ 411 (560)
T PLN02574 353 GMTESTAVGTRGFNTEKLSKYSSVGLLAP------NMQAKVVDWSTGC----------LLPPGNCGELWIQ----GP-GV 411 (560)
T ss_pred cccccCceeecCCCccccCCCCceeeeCC------CcEEEEEeCCCCc----------CCCCCCCeEEEEE----Cc-ch
Confidence 999998654321 134566777655 7999999987776 6689999999998 88 89
Q ss_pred cccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 430 FNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 430 ~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+.||+++++.+.+.+. .+|||+|||+|++|+||++++.||+||++
T Consensus 412 ~~GY~~~~~~t~~~~~-----~~g~~~TGDlg~~~~~G~l~i~GR~~d~i 456 (560)
T PLN02574 412 MKGYLNNPKATQSTID-----KDGWLRTGDIAYFDEDGYLYIVDRLKEII 456 (560)
T ss_pred hhhhcCChhHhhhhcc-----CCCCcccceEEEEECCCeEEEEecchhhe
Confidence 9999999887766553 37999999999999999999999999985
No 33
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-54 Score=444.91 Aligned_cols=433 Identities=19% Similarity=0.218 Sum_probs=332.0
Q ss_pred cceeeeeecCCCcccHHHHHHhhhhcccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCC
Q psy8225 19 KAGMAAIVDTENSLDLKQLISGMQKTLPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGD 94 (479)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd 94 (479)
..+|+++.+..+--+...+.....+..+.++.++++++++++|+++|+++. +|| ||.++++++|+.|.+.|+++||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd 83 (573)
T PRK05605 4 SQEMSAFADKPWLQSYAPWTPHDLDYGDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGD 83 (573)
T ss_pred hHHHHHHhcCCchhhcCCCCCcccCCCcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 345677765553322222211111112357999999999999999999987 999 9999999999999999999999
Q ss_pred EEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCC-
Q psy8225 95 AVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRR- 173 (479)
Q Consensus 95 ~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 173 (479)
+|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++|++......+.++......-.++..+...
T Consensus 84 ~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 163 (573)
T PRK05605 84 RVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAA 163 (573)
T ss_pred EEEEECCCCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeecccc
Confidence 9999999999999999999999999999999999999999999999999999877655554443322211122211000
Q ss_pred -CCCc-------------------cCCCccccccccCCcCCCCC-CcccccCCCCCCcEEEEEccCCCCCcceEEeehHH
Q psy8225 174 -KPQA-------------------KVLPSTTLLDEELPEVSAKS-PTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVR 232 (479)
Q Consensus 174 -~~~~-------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~ 232 (479)
.... ........|+++........ ..........+++++++|||||||.||+|.++|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~ 243 (573)
T PRK05605 164 MPLLQRLALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRN 243 (573)
T ss_pred cccccccccccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHH
Confidence 0000 00001122333222211100 00111234578999999999999999999999999
Q ss_pred HHHHhhhhhhhcC--CCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHH
Q psy8225 233 AMFMAISGRYQTG--LTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRY 310 (479)
Q Consensus 233 l~~~~~~~~~~~~--~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~ 310 (479)
+...+......+. ...++++++.+|++|.+|+...+..++..|+++++.+.+++..+++.++++++|++.++|++++.
T Consensus 244 l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~ 323 (573)
T PRK05605 244 LFANAAQGKAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEK 323 (573)
T ss_pred HHHHHHHHHhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHH
Confidence 9877654433222 23478999999999999987778888999999999888899999999999999999999999999
Q ss_pred HhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccCC----CCCCcccccCccccCCC
Q psy8225 311 LLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNAD----GKVGAVGYIPYIAIPFY 384 (479)
Q Consensus 311 l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~----~~~~~~g~~~~~~~~~~ 384 (479)
|.+........++++|.++ |+++++++.+++.+.++. ++++.||+||+++.+.... .+++++|.|.+
T Consensus 324 l~~~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~-~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~------ 396 (573)
T PRK05605 324 IAEAAEERGVDLSGVRNAFSGAMALPVSTVELWEKLTGG-LLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFP------ 396 (573)
T ss_pred HHhCccccCCCchhccEEEECCCcCCHHHHHHHHHHhCC-CeecccccchhchhhhcCCcccCCcCCccccCCC------
Confidence 9987766666788999887 788999999999999987 8999999999987654322 23466777655
Q ss_pred ceeeEEeCCCC-CCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEE
Q psy8225 385 PVGLIKCDPET-SEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIK 463 (479)
Q Consensus 385 ~~~~~i~d~~~-~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~ 463 (479)
+++++++|+++ +. +++.|+.|||+++ |+ .++.||++++..+.+.|. +|||+|||+|++
T Consensus 397 ~~~~~i~d~~~~~~----------~~~~g~~Gel~v~----~~-~~~~gy~~~~~~~~~~~~------~g~~~TGD~~~~ 455 (573)
T PRK05605 397 DTEVRIVDPEDPDE----------TMPDGEEGELLVR----GP-QVFKGYWNRPEETAKSFL------DGWFRTGDVVVM 455 (573)
T ss_pred CCEEEEEcCCCCCc----------cCCCCCeeEEEEe----cC-chhhhhcCChhHhhhccc------CCCcccCCEEEE
Confidence 78999999775 34 5688999999998 77 899999998877766553 579999999999
Q ss_pred ecCCcEEEecCCCCCC
Q psy8225 464 DKFQYFYFKDRTGDAC 479 (479)
Q Consensus 464 d~dG~l~~~GR~~d~~ 479 (479)
|++|++++.||.||++
T Consensus 456 ~~~g~l~i~gR~dd~i 471 (573)
T PRK05605 456 EEDGFIRIVDRIKELI 471 (573)
T ss_pred cCCCcEEEEeccccce
Confidence 9999999999999985
No 34
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=2.1e-53 Score=433.76 Aligned_cols=400 Identities=27% Similarity=0.410 Sum_probs=324.5
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.+.++.++|+++++.+|+++|+++. +|| ||.++++++|..|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 19 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~ 98 (542)
T PRK06155 19 SERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIA 98 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEE
Confidence 4467899999999999999999987 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcc-eEEecCCCCCCCccCCCcccccccc-CCcCCCCCC
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGI-SLYAAGTRRKPQAKVLPSTTLLDEE-LPEVSAKSP 198 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 198 (479)
+|+++.++.+++.++++.+++++++++.+....+.+.......+ +++.++..... .. ...+... ....... .
T Consensus 99 vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~-~ 172 (542)
T PRK06155 99 VPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASV--SV---PAGWSTAPLPPLDAP-A 172 (542)
T ss_pred EEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCcccc--cc---ccccchhhhcccCCC-C
Confidence 99999999999999999999999999987766665543322222 23333322110 00 0001000 0000000 0
Q ss_pred cccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceE
Q psy8225 199 TEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTV 278 (479)
Q Consensus 199 ~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~ 278 (479)
......++++++++|||||||.||+|+++|.++..........++++.++++++.+|++|..++. .++.++..|+++
T Consensus 173 --~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~-~~~~~l~~G~~~ 249 (542)
T PRK06155 173 --PAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALN-AFFQALLAGATY 249 (542)
T ss_pred --CCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHH-HHHHHHHcCceE
Confidence 01234568899999999999999999999999988777667778889999999999999999874 567899999999
Q ss_pred EecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEEecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 279 VIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMIGNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 279 v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
++.+.+++..+++.|+++++|++.++|+++..|.+.........+++|.++++.+++++.+++++.++. ++++.||+||
T Consensus 250 ~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~-~v~~~YG~tE 328 (542)
T PRK06155 250 VLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPGVPAALHAAFRERFGV-DLLDGYGSTE 328 (542)
T ss_pred EeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcCCCHHHHHHHHHHcCC-CEEeeecccc
Confidence 999999999999999999999999999999999887766555678899888666889999999999998 8999999999
Q ss_pred cCcccccC--CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCc
Q psy8225 359 GNANLMNA--DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADK 436 (479)
Q Consensus 359 ~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~ 436 (479)
++.++... ...++++|.+.+ +++++++|++ ++ +++.|+.|||++++. .+.+++.||+++
T Consensus 329 ~~~~~~~~~~~~~~~~vG~~~~------~~~~~i~d~~-~~----------~~~~g~~Gei~v~~~--~~~~~~~GY~~~ 389 (542)
T PRK06155 329 TNFVIAVTHGSQRPGSMGRLAP------GFEARVVDEH-DQ----------ELPDGEPGELLLRAD--EPFAFATGYFGM 389 (542)
T ss_pred cCccccCCCCCCCCCCcCccCC------CceEEEECCC-CC----------CCCCCCceEEEEecC--CccccchhhcCC
Confidence 98765532 345567777655 7888888855 44 568899999999832 122589999998
Q ss_pred chhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 437 KASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 437 ~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++.+.+.+. ++||+|||+|++|+||+++|.||.||++
T Consensus 390 ~~~~~~~~~------~~~~~TGD~~~~~~dG~l~i~GR~~d~i 426 (542)
T PRK06155 390 PEKTVEAWR------NLWFHTGDRVVRDADGWFRFVDRIKDAI 426 (542)
T ss_pred HHHHHHhhc------CCcEeccceEEEcCCceEEEEecCCCEE
Confidence 877776553 7999999999999999999999999974
No 35
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.5e-54 Score=436.41 Aligned_cols=388 Identities=17% Similarity=0.216 Sum_probs=315.4
Q ss_pred cchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
+.++.++|.++++++|+++|+++. +|| ||.++++++|++|.++|+++||+|+++++|+++++++++||+++|++++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 356899999999999999999986 999 9999999999999999999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCcCCCCCCcc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTE 200 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (479)
|+++.++.+++.++++.++++++|++......+.......+... ++...+.. ....++.+........
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--- 190 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDED--------HDLTVEVLIAAHAGQR--- 190 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCc--------ccccHHHHhhccCcCC---
Confidence 99999999999999999999999999876665544433332221 22221110 0111222222111111
Q ss_pred cccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEe
Q psy8225 201 DIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVI 280 (479)
Q Consensus 201 ~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~ 280 (479)
.....++.++++|||||||.||||+++|.++..........+.+..++++++.+|++|.+|+ ..++.++..|+++++
T Consensus 191 --~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~~~~~ 267 (537)
T PRK13382 191 --PEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGF-SQLVLAASLACTIVT 267 (537)
T ss_pred --CCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHH-HHHHHHHhcCcEEEE
Confidence 11245778999999999999999999999888877777777778899999999999999987 567788889999999
Q ss_pred cCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 281 RSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 281 ~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
...+++..+++.|+++++|++..+|++++.|.+.... ...+.+++|.++ |+++++++++.|.+.+|. .+++.||+
T Consensus 268 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~i~~~YG~ 346 (537)
T PRK13382 268 RRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGD-VIYNNYNA 346 (537)
T ss_pred CCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCC-cEEecccc
Confidence 8899999999999999999999999999999876532 223456888776 899999999999999998 89999999
Q ss_pred cccCcccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccccc
Q psy8225 357 TEGNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNG 432 (479)
Q Consensus 357 tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~g 432 (479)
||++..+... ...++++|+|++ ++.++++|++ ++ +++.|+.|||+++ |+ +++.|
T Consensus 347 TE~~~~~~~~~~~~~~~~~~vG~p~~------~~~~~i~d~~-~~----------~~~~g~~GEl~v~----g~-~~~~g 404 (537)
T PRK13382 347 TEAGMIATATPADLRAAPDTAGRPAE------GTEIRILDQD-FR----------EVPTGEVGTIFVR----ND-TQFDG 404 (537)
T ss_pred cccCcceecChhHhccCCCCccccCc------CcEEEEECCC-CC----------CCCCCCeeEEEEE----cC-CcccC
Confidence 9998665432 234567777665 7999999864 44 5688999999998 77 89999
Q ss_pred ccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 433 YADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 433 Y~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+ ++.+..+. +|||+|||++++|+||+++|.||+||++
T Consensus 405 Y~--~~~~~~~~-------~g~~~TGDl~~~~~~g~l~~~GR~dd~i 442 (537)
T PRK13382 405 YT--SGSTKDFH-------DGFMASGDVGYLDENGRLFVVGRDDEMI 442 (537)
T ss_pred cc--ccchhhcc-------CCCEeeCceEEEeCCCcEEEecccccee
Confidence 98 33343321 6899999999999999999999999985
No 36
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-53 Score=432.64 Aligned_cols=402 Identities=22% Similarity=0.285 Sum_probs=333.2
Q ss_pred cchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
+.++.+.|.+.++.+|+++|+++. +|| ||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 4 ~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v 83 (513)
T PRK07656 4 WMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVV 83 (513)
T ss_pred cccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEE
Confidence 456889999999999999999998 999 9999999999999999999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEe-cCCCCCCCccCCCccccccccCCcCCCCCCcc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYA-AGTRRKPQAKVLPSTTLLDEELPEVSAKSPTE 200 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (479)
|+++..+.+++.++++.+++++++++..............+..+.+. ........ .......|+++.........
T Consensus 84 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 159 (513)
T PRK07656 84 PLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDP--HTEKMKTFTDFLAAGDPAER-- 159 (513)
T ss_pred ecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCccccc--CccccccHHHHHhcCCCCCC--
Confidence 99999999999999999999999998876666555544444433322 22111100 00011234444332221111
Q ss_pred cccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEe
Q psy8225 201 DIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVI 280 (479)
Q Consensus 201 ~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~ 280 (479)
......+++++++|||||||.||+|.++|.++...+......++++.++++++.+|++|.+|+...++.++..|+++++
T Consensus 160 -~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 238 (513)
T PRK07656 160 -APEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILP 238 (513)
T ss_pred -cCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEe
Confidence 1345678899999999999999999999999998888877888899999999999999999988888899999999999
Q ss_pred cCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 281 RSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 281 ~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
.+.+++..+++.++++++|++.++|++++.|.+........++++|.++ |+++++++++++.+.++...+++.||+||
T Consensus 239 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE 318 (513)
T PRK07656 239 LPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSE 318 (513)
T ss_pred cCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEcccc
Confidence 8888999999999999999999999999999988776666788999887 89999999999999998767999999999
Q ss_pred cCcccccCC----C--CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccccc
Q psy8225 359 GNANLMNAD----G--KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNG 432 (479)
Q Consensus 359 ~~~~~~~~~----~--~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~g 432 (479)
+++++.... . .++++|.|++ +++++++|++ +. +++.|+.|||+++ |+ .++.|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~vG~~~~------~~~~~i~d~~-~~----------~~~~g~~Gel~v~----~~-~~~~g 376 (513)
T PRK07656 319 ASGVTTFNRLDDDRKTVAGTIGTAIA------GVENKIVNEL-GE----------EVPVGEVGELLVR----GP-NVMKG 376 (513)
T ss_pred CCCceeecCccccccccCCCccccCC------CcEEEEECCC-CC----------CCCCCCceEEEEE----cc-hhhhh
Confidence 986654322 1 1456666554 7899999854 44 5688999999998 77 89999
Q ss_pred ccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 433 YADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 433 Y~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|++++..+...++ ++|||+|||+|++++||++++.||.||++
T Consensus 377 y~~~~~~~~~~~~-----~~~~~~tGDl~~~~~~g~~~~~GR~~d~i 418 (513)
T PRK07656 377 YYDDPEATAAAID-----ADGWLHTGDLGRLDEEGYLYIVDRKKDMF 418 (513)
T ss_pred hcCCHHHHhhhhc-----cCCceeccceEEEcCCeeEEEEecccceE
Confidence 9998877766553 37899999999999999999999999974
No 37
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-53 Score=428.65 Aligned_cols=382 Identities=19% Similarity=0.267 Sum_probs=318.7
Q ss_pred hHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeee
Q psy8225 49 ARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKS-KGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 49 l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l 123 (479)
+.+.|+++++.+|+++|+++. +|| ||.++++++|+.|++ .|+++|++|+++++|+++++++++||+++|++++|+
T Consensus 4 ~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~~ 83 (496)
T PRK06839 4 IAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVPL 83 (496)
T ss_pred HHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEec
Confidence 678999999999999999986 999 999999999999986 699999999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCccccc
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIK 203 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (479)
++..+.+++..+++.+++++++++......+.+.........++.+.+ +++........ ..
T Consensus 84 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~-----~~ 144 (496)
T PRK06839 84 NIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITS--------------LKEIEDRKIDN-----FV 144 (496)
T ss_pred CcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecc--------------hHhhhccCCCC-----CC
Confidence 999999999999999999999999876655544433222222222211 11111111100 12
Q ss_pred CCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC
Q psy8225 204 KNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK 283 (479)
Q Consensus 204 ~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~ 283 (479)
....+++++++|||||||.||+|.++|.++..........+++..+|++++.+|++|.+|+...++.++..|+++++.+.
T Consensus 145 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~ 224 (496)
T PRK06839 145 EKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRK 224 (496)
T ss_pred CCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccC
Confidence 33567899999999999999999999999877666666677888999999999999999987777888999999999889
Q ss_pred CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCc
Q psy8225 284 FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNA 361 (479)
Q Consensus 284 ~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~ 361 (479)
+++..+++.++++++|++.++|++++.|.+........++++|.++ |+++++++.+.+.+. +. ++.+.||+||++.
T Consensus 225 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~-g~-~~~~~YG~tE~~~ 302 (496)
T PRK06839 225 FEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR-GF-LFGQGFGMTETSP 302 (496)
T ss_pred CCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh-CC-eeEeeccCCCCCc
Confidence 9999999999999999999999999999988765556688999877 888999999999876 87 8999999999986
Q ss_pred ccccC-----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCc
Q psy8225 362 NLMNA-----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADK 436 (479)
Q Consensus 362 ~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~ 436 (479)
.+... ....+++|+|++ +++++++|+++. +++.|+.|||+++ |+ .++.||+++
T Consensus 303 ~~~~~~~~~~~~~~~~~G~p~~------~~~~~i~d~~~~-----------~~~~g~~Gel~v~----~~-~~~~gy~~~ 360 (496)
T PRK06839 303 TVFMLSEEDARRKVGSIGKPVL------FCDYELIDENKN-----------KVEVGEVGELLIR----GP-NVMKEYWNR 360 (496)
T ss_pred ceEecccccccccCCCCcccCC------CceEEEECCCcC-----------CCCCCCceEEEEE----CC-CcchhhcCC
Confidence 54322 234567777665 788999986643 4688999999998 77 899999999
Q ss_pred chhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 437 KASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 437 ~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++.+...++ +|||+|||+|++|++|++++.||.||++
T Consensus 361 ~~~~~~~~~------~g~~~TGDl~~~~~~g~~~~~GR~~d~i 397 (496)
T PRK06839 361 PDATEETIQ------DGWLCTGDLARVDEDGFVYIVGRKKEMI 397 (496)
T ss_pred hHHHHHHHc------CCCeeecceEEEcCCCcEEEeccccceE
Confidence 888776664 7899999999999999999999999974
No 38
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-54 Score=387.54 Aligned_cols=414 Identities=16% Similarity=0.197 Sum_probs=345.2
Q ss_pred CcccHHHHHHhhhhcccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH
Q psy8225 30 NSLDLKQLISGMQKTLPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE 105 (479)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e 105 (479)
++.+...-...---+...++.++|.+++.++||++|+++. +|| +|.++++++|.+|+++|+++||+|.+.+||..+
T Consensus 11 wP~~~a~~YR~~GyW~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~e 90 (542)
T COG1021 11 WPEEFARRYREKGYWQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAE 90 (542)
T ss_pred CcHHHHHHHHhcCcccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHH
Confidence 4544444444322345567899999999999999999998 999 999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh-----hHHHHHHhhccCCcceEEecCCCCCCCccCC
Q psy8225 106 YVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE-----LSEALTEVKDSIPGISLYAAGTRRKPQAKVL 180 (479)
Q Consensus 106 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (479)
|++++||++++|+.+|.--|.....|+.++.+.++++.+|.+.. ..+...+....++.++.+.+.....
T Consensus 91 f~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~------ 164 (542)
T COG1021 91 FYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAE------ 164 (542)
T ss_pred HHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCC------
Confidence 99999999999999999889999999999999999999998753 3456677777888877655543221
Q ss_pred CccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchh
Q psy8225 181 PSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYH 260 (479)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h 260 (479)
.....+..+.. ....... ..+.++++++++..+.||||.||-+..+|.....++.......+++..++++|.+|..|
T Consensus 165 ~~~~~~~~~~~-~a~~~~~--a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AH 241 (542)
T COG1021 165 HPSVLEAALCH-PAGLFTP--APPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAH 241 (542)
T ss_pred CcchhhhhhhC-ccccCCc--CCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEeccccc
Confidence 00111222222 1111111 14567888999999999999999999999999888888888889999999999999999
Q ss_pred hhhhHH-HHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhh
Q psy8225 261 TAGGLL-GIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQV 337 (479)
Q Consensus 261 ~~g~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~ 337 (479)
-+.+.+ +.++.+..|+++|+.+..++.....+|+++++|+..++|.....|+...+....+++|||++- |+.+++++
T Consensus 242 NfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~ 321 (542)
T COG1021 242 NFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATL 321 (542)
T ss_pred CCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHH
Confidence 887643 578889999999999999999999999999999999999999999998888888899999987 77899999
Q ss_pred HHHHHHHhCcceeeeeccccccCcccccCCCCC----CcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCC
Q psy8225 338 WEPFQKRFGLDRICEFYGATEGNANLMNADGKV----GAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEE 413 (479)
Q Consensus 338 ~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~ 413 (479)
.+++...+|+ .+.+.+||.|.-...+..++.+ .+-|+|+.+ .=+++|+|.+ |+ +|++||
T Consensus 322 Arrv~~~lgC-~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP-----~DEvrvvD~d-g~----------pv~pGE 384 (542)
T COG1021 322 ARRVPAVLGC-QLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSP-----DDEVRVVDAD-GN----------PVAPGE 384 (542)
T ss_pred HhhchhhhCc-hHHHHhhhhhhhhcccccCCchHheeecCCCcCCC-----cceeEEecCC-CC----------CCCCCC
Confidence 9999999999 9999999999876666554332 456887642 4567777754 44 789999
Q ss_pred CceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 414 PGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 414 ~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|+|..+ || -.+.|||+.|+.+.+.|+. +|+|+|||+.++|+||+|.+.||.||++
T Consensus 385 ~G~LltR----GP-YTirGYyrap~HNa~aF~a-----~GFYrsGD~V~~~~dGyl~V~GR~KDQI 440 (542)
T COG1021 385 VGELLTR----GP-YTIRGYYRAPEHNARAFDA-----DGFYRSGDLVRRDPDGYLVVEGRVKDQI 440 (542)
T ss_pred cceeeec----CC-eeeeeeccCchhhhhccCc-----CCceecCceeEecCCceEEEEeeehhhh
Confidence 9999988 99 8999999999999888863 9999999999999999999999999974
No 39
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.8e-53 Score=436.35 Aligned_cols=399 Identities=21% Similarity=0.204 Sum_probs=305.8
Q ss_pred chhHHHHHHHhhcCCCccccEE-------------EEeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY-------------TVTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLG 112 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~-------------~~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA 112 (479)
.++.++|.+.++++|+++|+++ .+|| ||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la 85 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFA 85 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence 4477899999999999999987 2799 9999999999999999999999999999999999999999
Q ss_pred hhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh--hHHHHHHhhccCCcc-eEEecCCCCCCCccCCCcccccccc
Q psy8225 113 LSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE--LSEALTEVKDSIPGI-SLYAAGTRRKPQAKVLPSTTLLDEE 189 (479)
Q Consensus 113 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (479)
|+++|++++|++|.++.+++.+++++++++++|++.+ ....+.... .... .++..+.... .....++++
T Consensus 86 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~------~~~~~~~~~ 157 (552)
T PRK09274 86 LFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWG--KPSVRRLVTVGGRLL------WGGTTLATL 157 (552)
T ss_pred HHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccC--ccchhheeccccccc------cCCccHHHh
Confidence 9999999999999999999999999999999999752 222211110 0111 1222211100 011123333
Q ss_pred CCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHH
Q psy8225 190 LPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIG 269 (479)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~ 269 (479)
.......... .....++++++++|||||||.||+|+++|+++...+......+++..+++.++.+|++|.+++
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~----- 230 (552)
T PRK09274 158 LRDGAAAPFP--MADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALFGP----- 230 (552)
T ss_pred cccCccccCC--CCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhhhh-----
Confidence 2111111111 133456889999999999999999999999999888887778889999999999999887653
Q ss_pred HHHhcCceEEecC-------CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHH
Q psy8225 270 QCLLGGSTVVIRS-------KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEP 340 (479)
Q Consensus 270 ~~l~~G~~~v~~~-------~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~ 340 (479)
..|.++++.+ .+++..+++.|+++++|+++++|++++.|.+........+++||.++ |+++++++.++
T Consensus 231 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~ 307 (552)
T PRK09274 231 ---ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIER 307 (552)
T ss_pred ---hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHH
Confidence 3477777654 36789999999999999999999999999887655555788999877 88999999999
Q ss_pred HHHHhCc-ceeeeeccccccCcccccCC-------------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcc
Q psy8225 341 FQKRFGL-DRICEFYGATEGNANLMNAD-------------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLC 406 (479)
Q Consensus 341 ~~~~~~~-~~v~~~YG~tE~~~~~~~~~-------------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~ 406 (479)
+++.++. .++++.||+||+++++.... ....++|+|+| +++++++|+.++.....+++
T Consensus 308 ~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~------~~~~~ivd~~~~~~~~~~~~-- 379 (552)
T PRK09274 308 FRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVD------GVEVRIIAISDAPIPEWDDA-- 379 (552)
T ss_pred HHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCC------CceEEEEecccccccccccc--
Confidence 9999952 38999999999986543211 01124566554 89999998653321111122
Q ss_pred ccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCc--EEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 407 IPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDA--AFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 407 ~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g--~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.+++.|+.|||+++ |+ +++.|||++++.+...+. .+.+| ||+|||+|++|+||+|+++||.||++
T Consensus 380 ~~~~~g~~Gel~v~----g~-~~~~GY~~~~~~t~~~~~---~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i 446 (552)
T PRK09274 380 LRLATGEIGEIVVA----GP-MVTRSYYNRPEATRLAKI---PDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRV 446 (552)
T ss_pred ccCCCCCeeEEEEe----cC-cccccccCChHHhhhhhc---ccCCCCcEEEcCCEEEEccCCcEEEEeccCCeE
Confidence 26789999999998 78 899999999877665431 12245 99999999999999999999999975
No 40
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=8.9e-53 Score=428.55 Aligned_cols=398 Identities=16% Similarity=0.192 Sum_probs=319.3
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
...++.++|+++++.+|+++|+++. +|| ||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 21 ~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 100 (527)
T TIGR02275 21 QDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAP 100 (527)
T ss_pred cCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEE
Confidence 3456899999999999999999987 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhH-----HHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCC
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELS-----EALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSA 195 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (479)
+++++..+.+++.++++.+++++++++.... ..........+.+..+........ .......+.....
T Consensus 101 v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 173 (527)
T TIGR02275 101 VLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRV-------EAELFLWLESPAE 173 (527)
T ss_pred eccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCC-------cchhhHHhhCcCc
Confidence 9999999999999999999999999976532 112222222333332222111000 0001111111110
Q ss_pred CCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHH-HHHHHHhc
Q psy8225 196 KSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLL-GIGQCLLG 274 (479)
Q Consensus 196 ~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~-~~~~~l~~ 274 (479)
.. ......++++++++|||||||.||+|+++|.++...+......+.+..+|++++.+|++|.+++.. .++.++..
T Consensus 174 ~~---~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~ 250 (527)
T TIGR02275 174 PV---KFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYA 250 (527)
T ss_pred cc---cCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhc
Confidence 10 013446789999999999999999999999999988887777788899999999999999998754 47788999
Q ss_pred CceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeee
Q psy8225 275 GSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICE 352 (479)
Q Consensus 275 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~ 352 (479)
|+++++.+.+++..+++.++++++|++..+|++++.|.+........++++|.++ |+++++++.+++.+.++. ++++
T Consensus 251 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~-~~~~ 329 (527)
T TIGR02275 251 GGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFGC-QLQQ 329 (527)
T ss_pred CCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHhCC-eEEe
Confidence 9999998888999999999999999999999999999887766556678999877 889999999999999998 9999
Q ss_pred eccccccCcccccCC----CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccc
Q psy8225 353 FYGATEGNANLMNAD----GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAES 428 (479)
Q Consensus 353 ~YG~tE~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~ 428 (479)
.||+||++......+ ...+++|+|++. +..++++|++ ++ ++++|+.|||+++ |+ .
T Consensus 330 ~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~-----~~~v~i~d~~-g~----------~~~~g~~Gei~v~----g~-~ 388 (527)
T TIGR02275 330 VFGMAEGLVNYTRLDDPAEIIFTTQGRPMSP-----DDEVRVVDDH-GN----------PVAPGETGMLLTR----GP-Y 388 (527)
T ss_pred eeccCccCccccCCCCccccccccCCCCCCC-----CceEEEECCC-CC----------CCCCCCceEEEec----CC-c
Confidence 999999764433221 233566775531 4677778754 44 4688999999998 77 8
Q ss_pred ccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 429 HFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 429 ~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++.||+++++.+.+.+. .+|||+|||+|++|+||++++.||.||++
T Consensus 389 ~~~gY~~~~~~~~~~~~-----~dg~~~TGDl~~~~~~g~l~~~gR~~d~i 434 (527)
T TIGR02275 389 TFRGYYKAPEHNAAAFD-----AEGFYYTGDLVRLTPEGYIVVVGRAKDQI 434 (527)
T ss_pred cchhhcCChhHhHhhcC-----cCCCEEcCceEEEcCCccEEEEeccccee
Confidence 99999999887776654 37899999999999999999999999975
No 41
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-53 Score=428.68 Aligned_cols=377 Identities=17% Similarity=0.196 Sum_probs=308.9
Q ss_pred hhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeee
Q psy8225 48 YARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 48 ~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l 123 (479)
++.++|.++++++|+++|+.+. +|| ||.++++++|+.|.+.|. +|++|+|+++|++++++++|||+++|++++|+
T Consensus 2 ~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l 80 (487)
T PRK07638 2 GITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVPL 80 (487)
T ss_pred ChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEec
Confidence 5789999999999999999887 999 999999999999999984 79999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCccccc
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIK 203 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (479)
++.++.+++.++++.+++++++++......+... ...++.... +.+.......... ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~--------------~~~~~~~~~~~~~---~~ 138 (487)
T PRK07638 81 DIKWKQDELKERLAISNADMIVTERYKLNDLPDE-----EGRVIEIDE--------------WKRMIEKYLPTYA---PI 138 (487)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEecccccchhhc-----cceEEEehh--------------hhhhhhhcccccc---cc
Confidence 9999999999999999999999987544333211 112221111 1111111111000 01
Q ss_pred CCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC
Q psy8225 204 KNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK 283 (479)
Q Consensus 204 ~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~ 283 (479)
....+++++++|||||||.||+|+++|++++..+......+++..+|+++...|++|..++ ..++.++..|+++++.+.
T Consensus 139 ~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~~~ 217 (487)
T PRK07638 139 ENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLMRK 217 (487)
T ss_pred ccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEcCC
Confidence 2234668999999999999999999999998888877777888999999999999998775 667789999999999999
Q ss_pred CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE-ecCCChhhHHHHHHHhCcceeeeeccccccCcc
Q psy8225 284 FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI-GNGLRPQVWEPFQKRFGLDRICEFYGATEGNAN 362 (479)
Q Consensus 284 ~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~-G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~ 362 (479)
+++..+++.++++++|++.++|++++.|.+... ...+.++.+. |+++++++.+++.+.++..++++.||+||++..
T Consensus 218 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 294 (487)
T PRK07638 218 FIPNQVLDKLETENISVMYTVPTMLESLYKENR---VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFV 294 (487)
T ss_pred CCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCce
Confidence 999999999999999999999999999987732 2345666666 888999999999999965589999999999866
Q ss_pred cccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcch
Q psy8225 363 LMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKA 438 (479)
Q Consensus 363 ~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~ 438 (479)
+... ...++++|+|++ +++++++|++ |. ++++|+.|||+++ |+ .++.||+++++
T Consensus 295 ~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~~-g~----------~~~~g~~Gel~v~----~~-~~~~gy~~~~~ 352 (487)
T PRK07638 295 TALVDEESERRPNSVGRPFH------NVQVRICNEA-GE----------EVQKGEIGTVYVK----SP-QFFMGYIIGGV 352 (487)
T ss_pred EEecccccCCCCCCCCcccC------CcEEEEECCC-CC----------CCCCCCCeEEEEe----cc-cceeeecCCHH
Confidence 5432 234556777655 7899999854 44 5689999999998 77 89999999987
Q ss_pred hHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 439 SEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 439 ~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.+.+.+. +|||+|||+|++|+||++++.||+||++
T Consensus 353 ~~~~~~~------~g~~~TGDl~~~d~~g~l~i~GR~~d~i 387 (487)
T PRK07638 353 LARELNA------DGWMTVRDVGYEDEEGFIYIVGREKNMI 387 (487)
T ss_pred HHhhhcc------CCcEecCccEeEcCCCeEEEEecCCCeE
Confidence 7665432 7899999999999999999999999985
No 42
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2.2e-53 Score=434.73 Aligned_cols=396 Identities=21% Similarity=0.280 Sum_probs=315.1
Q ss_pred chhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.++.+++.+.+..+|+++|+++. +|| ||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 28 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 107 (546)
T PLN02330 28 LTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVF 107 (546)
T ss_pred CcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEe
Confidence 56899999999999999999863 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcc
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTE 200 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (479)
+|+++..+.+++.++++.+++++++++......+... ...++.+..... .....|.+++..........
T Consensus 108 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~-----~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 176 (546)
T PLN02330 108 SGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL-----GLPVIVLGEEKI------EGAVNWKELLEAADRAGDTS 176 (546)
T ss_pred ccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc-----CCcEEEecCCCC------CCcccHHHHHhhccccCccc
Confidence 9999999999999999999999999998766655432 122333332111 11223444443222111110
Q ss_pred cccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcC--CCCCCeEEEeccchhhhhhHHHHHHHHhcCceE
Q psy8225 201 DIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTG--LTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTV 278 (479)
Q Consensus 201 ~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~ 278 (479)
.......++.++++|||||||.||||+++|+++...+.......+ ....++.+..+|++|.+|+...++.++..|+++
T Consensus 177 ~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~ 256 (546)
T PLN02330 177 DNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKV 256 (546)
T ss_pred ccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEE
Confidence 112334678999999999999999999999999876543222221 223467899999999999877777889999999
Q ss_pred EecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCC--ceeEEE--ecCCChhhHHHHHHHhCcceeeeec
Q psy8225 279 VIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQH--SVKMMI--GNGLRPQVWEPFQKRFGLDRICEFY 354 (479)
Q Consensus 279 v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~--~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~Y 354 (479)
++.+.+++..+++.++++++|.+.++|+++..+..........+. ++|.++ |+++++++++++.+.|+..++++.|
T Consensus 257 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~Y 336 (546)
T PLN02330 257 VVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAY 336 (546)
T ss_pred EEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecc
Confidence 999999999999999999999999999999999886554433443 466665 8999999999999999433999999
Q ss_pred cccccCcccccCC--------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCc
Q psy8225 355 GATEGNANLMNAD--------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRA 426 (479)
Q Consensus 355 G~tE~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~ 426 (479)
|+||++.+..... ..++++|+|+| +++++++|+++++ +++.|+.|||+++ |+
T Consensus 337 G~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~------~~~v~i~d~~~~~----------~~p~g~~Gel~v~----g~ 396 (546)
T PLN02330 337 GLTEHSCITLTHGDPEKGHGIAKKNSVGFILP------NLEVKFIDPDTGR----------SLPKNTPGELCVR----SQ 396 (546)
T ss_pred cccccccceecCCCccccccccccCccccccC------CcEEEEEeCCCCc----------cCCCCCceEEEEe----cc
Confidence 9999876543221 22345666554 8999999977666 5688999999998 77
Q ss_pred ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 427 ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 427 ~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.++.||++++..+.+.++ .+|||+|||+|++++||++++.||.||++
T Consensus 397 -~~~~gy~~~~~~~~~~~~-----~~g~~~TGD~~~~~~dG~l~~~GR~~d~i 443 (546)
T PLN02330 397 -CVMQGYYNNKEETDRTID-----EDGWLHTGDIGYIDDDGDIFIVDRIKELI 443 (546)
T ss_pred -hhhhhhccCccchhhhcc-----CCCceecccEEEEeCCCcEEEEechHHhh
Confidence 899999999877766553 37999999999999999999999999874
No 43
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-53 Score=431.27 Aligned_cols=404 Identities=21% Similarity=0.222 Sum_probs=329.2
Q ss_pred hcccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCc
Q psy8225 43 KTLPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGV 118 (479)
Q Consensus 43 ~~~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 118 (479)
.....++.++|.+.++.+|+++|+++. +|| ||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 7 ~~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~ 86 (523)
T PRK08316 7 RARRQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGA 86 (523)
T ss_pred cccCCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 344577999999999999999999987 999 9999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCC
Q psy8225 119 VAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSP 198 (479)
Q Consensus 119 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (479)
+++|+++..+.+++.++++.+++++++++.+....+.+..+......+........ .........+++..........
T Consensus 87 ~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 164 (523)
T PRK08316 87 VHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGG--REAPGGWLDFADWAEAGSVAEP 164 (523)
T ss_pred EEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccc--cccccchhhHHHHHhcCCCccC
Confidence 99999999999999999999999999999877666655443332111111110000 0001122223332222111111
Q ss_pred cccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceE
Q psy8225 199 TEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTV 278 (479)
Q Consensus 199 ~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~ 278 (479)
......+++++++|||||||.||+|.++|.++..........++++.++++++.+|++|..|+...+..++..|+++
T Consensus 165 ---~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~ 241 (523)
T PRK08316 165 ---DVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATN 241 (523)
T ss_pred ---ccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceE
Confidence 13456788999999999999999999999999988777777788999999999999999999876677788999999
Q ss_pred EecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 279 VIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 279 v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
++.+..++..+++.++++++|++.++|+++..|.+........++++|.+. |+.++.++.+.+++.++...+++.||+
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~ 321 (523)
T PRK08316 242 VILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQ 321 (523)
T ss_pred EEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecc
Confidence 999888999999999999999999999999999988766666778899876 788999999999998854489999999
Q ss_pred cccCcccccC-----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccc
Q psy8225 357 TEGNANLMNA-----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFN 431 (479)
Q Consensus 357 tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~ 431 (479)
||++.+.... ....+++|+|++ +++++++|++ +. +++.|+.|||+++ |+ +++.
T Consensus 322 tE~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~~~~-~~----------~~~~g~~Gei~v~----~~-~~~~ 379 (523)
T PRK08316 322 TEIAPLATVLGPEEHLRRPGSAGRPVL------NVETRVVDDD-GN----------DVAPGEVGEIVHR----SP-QLML 379 (523)
T ss_pred cccCccccccCccccccccCCcccCCC------CcEEEEEcCC-CC----------CCCCCCcceEEEE----CC-chhh
Confidence 9998765432 133466777665 7888888854 44 5678999999998 77 8999
Q ss_pred cccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 432 GYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 432 gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||+++++.+++.+. +|||+|||+|++|+||+++++||.||++
T Consensus 380 ~y~~~~~~~~~~~~------~~~~~TGDl~~~~~~g~l~i~gR~~~~i 421 (523)
T PRK08316 380 GYWDDPEKTAEAFR------GGWFHSGDLGVMDEEGYITVVDRKKDMI 421 (523)
T ss_pred hhcCCHHHHHHHhh------CCCeeccceEEEcCCceEEEecccccEE
Confidence 99999887776654 7899999999999999999999999974
No 44
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-53 Score=431.37 Aligned_cols=403 Identities=18% Similarity=0.232 Sum_probs=313.6
Q ss_pred hcccchhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q psy8225 43 KTLPTYARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKI 116 (479)
Q Consensus 43 ~~~~~~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~ 116 (479)
...-.++.++|+++++++|+++|+++. +|| ||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 12 ~~~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~ 91 (534)
T PRK05852 12 SDFGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRA 91 (534)
T ss_pred hhhcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence 334466999999999999999999874 999 99999999999999999999999999999999999999999999
Q ss_pred CceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCC
Q psy8225 117 GVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAK 196 (479)
Q Consensus 117 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (479)
|++++|+++.++.+++.++++.++++++|++................. .+........ ....... ........
T Consensus 92 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~--~~~~~~~~ 164 (534)
T PRK05852 92 DLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPL-TVNVGGDSGP----SGGTLSV--HLDAATEP 164 (534)
T ss_pred CcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccce-eeeecccccc----ccccccc--ccccccCC
Confidence 999999999999999999999999999999764332111100000011 1111110000 0000000 00000000
Q ss_pred CCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCc
Q psy8225 197 SPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGS 276 (479)
Q Consensus 197 ~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~ 276 (479)
...........++.++++|||||||.||+|+++|+++...+......++++.+|++++.+|++|.+|++..++.++..|+
T Consensus 165 ~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~ 244 (534)
T PRK05852 165 TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLATLASGG 244 (534)
T ss_pred CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCC
Confidence 00000012234678999999999999999999999999888888888889999999999999999999888889999999
Q ss_pred eEEecC--CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCC--CCCCCceeEEE--ecCCChhhHHHHHHHhCccee
Q psy8225 277 TVVIRS--KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKP--EDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRI 350 (479)
Q Consensus 277 ~~v~~~--~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~--~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v 350 (479)
++++.. .+++..+++.++++++|.+.++|+++..|.+..... ....+++|.+. |+++++++++++.+.++. ++
T Consensus 245 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~-~v 323 (534)
T PRK05852 245 AVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEFAA-PV 323 (534)
T ss_pred eEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHhCC-Ch
Confidence 988854 478899999999999999999999999998765432 23467899887 789999999999999998 89
Q ss_pred eeeccccccCcccccCCC--------CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEee
Q psy8225 351 CEFYGATEGNANLMNADG--------KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIK 422 (479)
Q Consensus 351 ~~~YG~tE~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~ 422 (479)
++.||+||++..++.... ...+.|.+ ++ .++++++++|++ ++ ++++|+.|||+++
T Consensus 324 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~---g~-~~g~~~~i~d~~-g~----------~~~~g~~Gel~v~-- 386 (534)
T PRK05852 324 VCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLV---GR-STGAQIRIVGSD-GL----------PLPAGAVGEVWLR-- 386 (534)
T ss_pred hhccCccccchhhhcCCccccccccCcccccccC---CC-CCCCeEEEECCC-CC----------CCCCCCceEEEEe--
Confidence 999999999866543211 11233332 11 237889989865 44 5688999999998
Q ss_pred cCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 423 ESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 423 ~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+ .++.||+++++.+.+.+. +|||+|||+|++|+||++++.||.||++
T Consensus 387 --g~-~v~~gY~~~~~~t~~~~~------~g~~~TGD~~~~d~dG~l~~~gR~~d~i 434 (534)
T PRK05852 387 --GT-TVVRGYLGDPTITAANFT------DGWLRTGDLGSLSAAGDLSIRGRIKELI 434 (534)
T ss_pred --cC-cccchhcCCcccchhhhc------CCCcccCceEEEeCCCcEEEEecchhhE
Confidence 77 899999999887776553 7899999999999999999999999975
No 45
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.1e-52 Score=427.22 Aligned_cols=402 Identities=24% Similarity=0.364 Sum_probs=320.8
Q ss_pred chhHHHHHHHhhcCCCccccEEE--------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcC
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT--------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIG 117 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~--------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G 117 (479)
.++.++|++.++++|+++|+++. +|| ||.++++++|..|.++|+++||+|+++++|+.+++++++||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 56899999999999999999863 999 999999999999999999999999999999999999999999999
Q ss_pred ceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCC-cce-EEecCCCCCCCccCCCccccccccCCcCCC
Q psy8225 118 VVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIP-GIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSA 195 (479)
Q Consensus 118 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (479)
++++++++..+.+++.+++++++++++|++.+..+.+.++.+... ..+ ++....... .......+++.......
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 162 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALP----ADDGVSSFTQLKAQQPA 162 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCc----ccccccCHHHHhccCCc
Confidence 999999999999999999999999999999887766666543321 222 222222110 01122233333222111
Q ss_pred CCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcC
Q psy8225 196 KSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGG 275 (479)
Q Consensus 196 ~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G 275 (479)
.... ......+++++++|||||||.||+|+++|.++............+..++++++.+|++|..+....++.++..|
T Consensus 163 ~~~~--~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 240 (517)
T PRK08008 163 TLCY--APPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAG 240 (517)
T ss_pred cccc--cCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcC
Confidence 1111 12345688999999999999999999999999865443333445788999999999999988878888899999
Q ss_pred ceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE-ecCCChhhHHHHHHHhCcceeeeec
Q psy8225 276 STVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI-GNGLRPQVWEPFQKRFGLDRICEFY 354 (479)
Q Consensus 276 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~-G~~l~~~~~~~~~~~~~~~~v~~~Y 354 (479)
+++++.+.+++..+++.++++++|++.++|++++.+............+++.+. |+++++++..+|.+.++. ++++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y 319 (517)
T PRK08008 241 ATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYLNLSDQEKDAFEERFGV-RLLTSY 319 (517)
T ss_pred cEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEecCCCHHHHHHHHHHhCC-eEEeec
Confidence 999999999999999999999999999999999998876554444456777766 788999999999999998 999999
Q ss_pred cccccCcccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccc
Q psy8225 355 GATEGNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHF 430 (479)
Q Consensus 355 G~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~ 430 (479)
|+||++..+... ....+++|.|++ +++++++|++ ++ +++.|+.|||++++. .++ +++
T Consensus 320 G~tE~~~~~~~~~~~~~~~~~~~G~~~~------g~~~~i~d~~-~~----------~~~~g~~Gel~v~g~-~~~-~~~ 380 (517)
T PRK08008 320 GMTETIVGIIGDRPGDKRRWPSIGRPGF------CYEAEIRDDH-NR----------PLPAGEIGEICIKGV-PGK-TIF 380 (517)
T ss_pred cccccccccccCCccccccCCccccCCC------CcEEEEECCC-CC----------CCCCCCcceEEEeCC-CCc-chh
Confidence 999997654322 123456666554 7889988854 44 568899999999831 124 799
Q ss_pred ccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 431 NGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 431 ~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.||+++++.+++.++ .+|||+|||+|++|+||++++.||.||++
T Consensus 381 ~gy~~~~~~~~~~~~-----~~g~~~TGDl~~~~~~g~~~~~GR~~d~i 424 (517)
T PRK08008 381 KEYYLDPKATAKVLE-----ADGWLHTGDTGYVDEEGFFYFVDRRCNMI 424 (517)
T ss_pred hhHhCChHHHhhccc-----CCCCeeccceEEECCCCcEEEeecccceE
Confidence 999999888876654 37899999999999999999999999975
No 46
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=9.7e-53 Score=429.36 Aligned_cols=394 Identities=20% Similarity=0.241 Sum_probs=317.6
Q ss_pred chhHHHHHHHhhcCCCccccEE--------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY--------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKI 116 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~--------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~ 116 (479)
.++.+++.++++.+|+++|+++ . +|| ||.++++++|.+|++.|+++|++|+++++|+++++++++||+++
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 101 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARI 101 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 4688999999999999999985 1 999 99999999999999999999999999999999999999999999
Q ss_pred CceeeeecCCcchHHHHHHHHhccceEEEeChhhH-----HHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccC
Q psy8225 117 GVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS-----EALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEEL 190 (479)
Q Consensus 117 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (479)
|++++|++|..+.+++.++++.++++++++++... ..........+... ++..+... ...++..+
T Consensus 102 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 172 (538)
T TIGR03208 102 GAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDG---------DDSFDRVL 172 (538)
T ss_pred CEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCC---------CcCHHHHh
Confidence 99999999999999999999999999999976532 22222323333222 33322111 11122221
Q ss_pred CcCCCC-CCc----ccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhH
Q psy8225 191 PEVSAK-SPT----EDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGL 265 (479)
Q Consensus 191 ~~~~~~-~~~----~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~ 265 (479)
...... ... ........+++++++|||||||.||+|+++|+++...+......++++.+|++++.+|++|..|++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 252 (538)
T TIGR03208 173 MTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFM 252 (538)
T ss_pred hccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHH
Confidence 111000 000 001234678899999999999999999999999998888777778888999999999999999988
Q ss_pred HHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHH
Q psy8225 266 LGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQK 343 (479)
Q Consensus 266 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~ 343 (479)
..++.++..|+++++.+.+++..+++.+++++++++.++|+++..+..........++++|.++ |+++++++.+++.+
T Consensus 253 ~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~ 332 (538)
T TIGR03208 253 YGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWE 332 (538)
T ss_pred HHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHH
Confidence 8888999999999998889999999999999999999999999988876544444678899877 88999999999999
Q ss_pred HhCcceeeeeccccccCcccccCCC-----CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEE
Q psy8225 344 RFGLDRICEFYGATEGNANLMNADG-----KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILI 418 (479)
Q Consensus 344 ~~~~~~v~~~YG~tE~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~ 418 (479)
.++. ++++.||+||++.+...... ...++|+|.+ +++++++|++ +. +++.|+.|||+
T Consensus 333 ~~~~-~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~------g~~v~i~~~~-~~----------~~~~g~~Gel~ 394 (538)
T TIGR03208 333 LLGA-LIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLP------GVEVKVIDAN-GA----------KLSQGETGRLL 394 (538)
T ss_pred HcCC-eEEeeeccCcCCCccccCcccchhhccCcccccCC------CCEEEEECCC-CC----------CCcCCCCcEEE
Confidence 9998 89999999998866543221 1235566554 7899998854 44 56889999999
Q ss_pred EEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 419 GMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 419 v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++ |+ .++.||+++++.+.. .++|||+|||+|++|+||+++++||.||++
T Consensus 395 v~----g~-~~~~gy~~~~~~~~~-------~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i 443 (538)
T TIGR03208 395 VR----GC-SNFGGYLKRPHLNST-------DAEGWFDTGDLAFQDAEGYIRINGRSKDVI 443 (538)
T ss_pred Ee----cC-cccccccCCcccccc-------cCCCceeccceEEECCCCcEEEEeccCceE
Confidence 98 77 899999998766531 147999999999999999999999999974
No 47
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-53 Score=432.48 Aligned_cols=402 Identities=20% Similarity=0.262 Sum_probs=313.7
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKS-KGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
.++.++|++.++.+|+++|++.. +|| ||.+++.++|++|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 35889999999999999999976 999 999999999999997 5999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCC--CCCcc-----------------CCC
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRR--KPQAK-----------------VLP 181 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~-----------------~~~ 181 (479)
|++|..+.+++.+++++++++++|++......+.+..... .++ ++..+... ..... ...
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT-GVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHLP 182 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc-CcceeEEecccccccchhhhhcccchhhccccccccCCc
Confidence 9999999999999999999999999876655444433322 122 22211000 00000 000
Q ss_pred ccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcC--CC-CCCeEEEeccc
Q psy8225 182 STTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTG--LT-SDDVVYTTLPL 258 (479)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~--~~-~~d~~~~~~pl 258 (479)
....+.+.+......... .....++++++++|||||||.||+|+++|+++...+......+. +. ..+++++.+|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~--~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl 260 (562)
T PRK05677 183 QAVKFNDALAKGAGQPVT--EANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPL 260 (562)
T ss_pred ccccHHHHHhcCCCCCCC--CCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcH
Confidence 011122222111111100 12345689999999999999999999999999876655544332 33 34688999999
Q ss_pred hhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCCh
Q psy8225 259 YHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRP 335 (479)
Q Consensus 259 ~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~ 335 (479)
+|.+|+...++..+..|.+.++.+ .+++..+++.++++++|.+..+|+++..+..........++++|.++ |+++++
T Consensus 261 ~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~ 340 (562)
T PRK05677 261 YHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQL 340 (562)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCH
Confidence 999998777777888888776654 57899999999999999999999999998876544444567899877 889999
Q ss_pred hhHHHHHHHhCcceeeeeccccccCcccccC---CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCC
Q psy8225 336 QVWEPFQKRFGLDRICEFYGATEGNANLMNA---DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAE 412 (479)
Q Consensus 336 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~ 412 (479)
++.+.|.+.++. ++++.||+||+++++... ..+++++|.|++ +++++++|++ +. +++.|
T Consensus 341 ~~~~~~~~~~~~-~v~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~------~~~v~i~d~~-~~----------~~~~g 402 (562)
T PRK05677 341 ATAERWKEVTGC-AICEGYGMTETSPVVSVNPSQAIQVGTIGIPVP------STLCKVIDDD-GN----------ELPLG 402 (562)
T ss_pred HHHHHHHHHcCC-CeeccCCccccCcceeecCccCCCCCccCccCC------CCEEEEECCC-CC----------CCCCC
Confidence 999999999998 999999999988665432 234567777665 7899999865 44 56899
Q ss_pred CCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 413 EPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 413 ~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+.|||+++ |+ .++.||+++++.+++.|. .+|||+|||+|++|+||++++.||+||++
T Consensus 403 ~~Gel~v~----g~-~~~~gY~~~~~~t~~~~~-----~~g~~~TGDlg~~~~~G~l~i~GR~~d~i 459 (562)
T PRK05677 403 EVGELCVK----GP-QVMKGYWQRPEATDEILD-----SDGWLKTGDIALIQEDGYMRIVDRKKDMI 459 (562)
T ss_pred CCeEEEEe----cC-ccchhhcCCchhhhhccC-----CCCcccccceEEECCCCcEEEEecCcCeE
Confidence 99999998 77 899999999888776654 37899999999999999999999999974
No 48
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-53 Score=432.34 Aligned_cols=397 Identities=19% Similarity=0.251 Sum_probs=305.5
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCc
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGV 118 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 118 (479)
.|.++.+.|.+.++.+|+++|+++. +|| ||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 12 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~ 91 (540)
T PRK05857 12 LPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGA 91 (540)
T ss_pred CCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCe
Confidence 4456889999999999999999853 999 9999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCC
Q psy8225 119 VAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSP 198 (479)
Q Consensus 119 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (479)
+++|+++.++.+++.++++.++++++|++.........+......+.++..+..... . .+...+.... .
T Consensus 92 v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~---~ 160 (540)
T PRK05857 92 IAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVT------R--ESEHSLDAAS---L 160 (540)
T ss_pred EEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeeccccc------c--cccccccccc---c
Confidence 999999999999999999999999999987643222222111122222222211100 0 0000000000 0
Q ss_pred cccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhh----hhcCCCCCCeEEEeccchhhhhhHHHHHHHHhc
Q psy8225 199 TEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGR----YQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLG 274 (479)
Q Consensus 199 ~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~----~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~ 274 (479)
........+++++++|||||||.||||+++|+++.++..... ..+....+++.++.+|++|..++. ..+.++..
T Consensus 161 -~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l~~ 238 (540)
T PRK05857 161 -AGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCLMH 238 (540)
T ss_pred -ccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHhhc
Confidence 001334678899999999999999999999999976654322 123556778999999999999875 46678888
Q ss_pred CceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeee
Q psy8225 275 GSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICE 352 (479)
Q Consensus 275 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~ 352 (479)
|+++++ ...++..+++.++++++|++.++|++++.|.+........++++|.++ |++++....+ +.+.++. ++++
T Consensus 239 G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~g~-~i~~ 315 (540)
T PRK05857 239 GGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEATGV-RTAQ 315 (540)
T ss_pred ceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHhCC-eeec
Confidence 888776 456788999999999999999999999999887655556788999876 7788877765 5567887 9999
Q ss_pred eccccccCcccccCC--------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecC
Q psy8225 353 FYGATEGNANLMNAD--------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKES 424 (479)
Q Consensus 353 ~YG~tE~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~ 424 (479)
.||+||++......+ .+++++|+|++ +++++++|++...... .. .++.|+.|||+++
T Consensus 316 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~------g~~v~i~d~~~~~~~~-~~----~~~~~~~Gel~v~---- 380 (540)
T PRK05857 316 VYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYP------GVDVYLAATDGIGPTA-PG----AGPSASFGTLWIK---- 380 (540)
T ss_pred ccCCCcCCceeeecccccccccccccCCcCcccC------CcEEEEECccccCccc-cc----cCCCCCcceEEEe----
Confidence 999999985433221 13467777665 8999999876433221 00 1355789999998
Q ss_pred CcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 425 RAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 425 ~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+ +++.||+++++.+.+.|. +|||+|||+|++|+||++++.||.||++
T Consensus 381 g~-~~~~GY~~~~~~t~~~~~------~g~~~TGDlg~~d~~g~l~~~GR~~~~i 428 (540)
T PRK05857 381 SP-ANMLGYWNNPERTAEVLI------DGWVNTGDLLERREDGFFYIKGRSSEMI 428 (540)
T ss_pred Cc-chhhhhhCCccchhhhcC------CCceeccceEEEcCCceEEEeccccccE
Confidence 77 899999999877776553 7899999999999999999999999974
No 49
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-52 Score=437.39 Aligned_cols=409 Identities=17% Similarity=0.165 Sum_probs=305.2
Q ss_pred chhHHHHHHHhhcCCCccccEEE-----------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhh
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT-----------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLS 114 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~-----------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~ 114 (479)
+....+|++++.++|+++|+++. +|| ||.+++.++|+.|+++|+++||+|+++++|++|+++++|||+
T Consensus 175 n~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~ 254 (728)
T PLN03052 175 NVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAII 254 (728)
T ss_pred EHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 44567888877778999999862 999 999999999999999999999999999999999999999999
Q ss_pred hcCceeeeecCCcchHHHHHHHHhccceEEEeChhhH------HHHHHhhccCCcceEEecCCCC-CCCccCCCcccccc
Q psy8225 115 KIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS------EALTEVKDSIPGISLYAAGTRR-KPQAKVLPSTTLLD 187 (479)
Q Consensus 115 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 187 (479)
++|++++|++|.++.+++.+++++++++++|+++... +...++...... +++++.... ............|+
T Consensus 255 ~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~-~~iv~~~~~~~~~~~~~~~~~~~~ 333 (728)
T PLN03052 255 LAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAP-KAIVLPADGKSVRVKLREGDMSWD 333 (728)
T ss_pred HcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCC-cEEEEeCCCCccccccccCCccHH
Confidence 9999999999999999999999999999999976432 122222221211 222221110 00000001122344
Q ss_pred ccCCcCCCC--CCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhH
Q psy8225 188 EELPEVSAK--SPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGL 265 (479)
Q Consensus 188 ~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~ 265 (479)
+++...... ...........+++++|+|||||||.||||+++|.+++..+......++++++|++++..|++|+++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l~w~~g~- 412 (728)
T PLN03052 334 DFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMGP- 412 (728)
T ss_pred HHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCcHHHhHH-
Confidence 443322110 00000112356889999999999999999999999987776666666788999999999999999986
Q ss_pred HHHHHHHhcCceEEecCC-CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHH
Q psy8225 266 LGIGQCLLGGSTVVIRSK-FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQ 342 (479)
Q Consensus 266 ~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~ 342 (479)
+.++.++..|+++++.+. .++..+++.++++++|++.++|++++.|.+.......++++||.+. |++++++...++.
T Consensus 413 ~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~~~~~~ 492 (728)
T PLN03052 413 WLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSVDDYLWLM 492 (728)
T ss_pred HHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCCHHHHHHHH
Confidence 567789999999999874 4667899999999999999999999999887644556789999887 8999999999988
Q ss_pred HHhCcceeeeeccccccCcccc-cC---CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCC--Cce
Q psy8225 343 KRFGLDRICEFYGATEGNANLM-NA---DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEE--PGI 416 (479)
Q Consensus 343 ~~~~~~~v~~~YG~tE~~~~~~-~~---~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~--~Ge 416 (479)
+.++..++++.||+||+++.+. .. +..++++|.|.+ ++++.++|++ |+ +|+.|+ .||
T Consensus 493 ~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~------g~~v~v~d~~-g~----------~v~~g~~~~GE 555 (728)
T PLN03052 493 SRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAM------GCKLFILDDS-GN----------PYPDDAPCTGE 555 (728)
T ss_pred HhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCC------CceEEEECCC-CC----------CCCCCCCceEE
Confidence 8877447999999999876433 22 234566666554 8999999954 55 456664 599
Q ss_pred EEEEeecCCc-ccccccccCcchhHHHHHh-hhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 417 LIGMIKESRA-ESHFNGYADKKASEKKILR-NVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 417 l~v~~~~~~~-~~~~~gY~~~~~~~~~~~~-~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+++ ++ .....+|++++.. ...|. .++..+++||+|||+|++|+||+++|+||.||++
T Consensus 556 L~v~----~~~~~~~~~~~~~~~~-~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I 615 (728)
T PLN03052 556 LALF----PLMFGASSTLLNADHY-KVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTM 615 (728)
T ss_pred EEEe----CCCCCCCccccCchhh-hhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEE
Confidence 9996 33 1334567776432 22221 1111245599999999999999999999999984
No 50
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-53 Score=439.74 Aligned_cols=394 Identities=19% Similarity=0.187 Sum_probs=299.8
Q ss_pred ccchhHHHHHHHhhcCCCccccEE--------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhh
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKY--------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLS 114 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~--------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~ 114 (479)
.+.++.++|+++++.+|+++|+++ . +|| ||.++++++|++|.+.|+++||+|+++++|+++|++++|||+
T Consensus 47 ~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 126 (624)
T PRK12582 47 YPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAM 126 (624)
T ss_pred cccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHH
Confidence 346689999999999999999985 3 999 999999999999999999999999999999999999999999
Q ss_pred hcCceeeeecCCcch-----HHHHHHHHhccceEEEeChhh-HHHHHHhhccCCcceEEecCCCCCCCccCCCccccccc
Q psy8225 115 KIGVVAAFINTNQRQ-----HILIHSIKVAECKAIIYGAEL-SEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDE 188 (479)
Q Consensus 115 ~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (479)
++|++++|++|.++. +++.++++.++++++|+++.. .......... ...+++....... ......+.+
T Consensus 127 ~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-----~~~~~~~~~ 200 (624)
T PRK12582 127 QAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL-LDVTVVHVTGPGE-----GIASIAFAD 200 (624)
T ss_pred HcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh-cCceEEEEcCCCc-----ccccccHHH
Confidence 999999999999875 899999999999999997642 2211111111 1233333322110 001122333
Q ss_pred cCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCC---CCeEEEeccchhhhhhH
Q psy8225 189 ELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTS---DDVVYTTLPLYHTAGGL 265 (479)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~---~d~~~~~~pl~h~~g~~ 265 (479)
+.................++++++|+|||||||.||||++||+++............... .+++++++|++|.+|+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~ 280 (624)
T PRK12582 201 LAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGN 280 (624)
T ss_pred HhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHH
Confidence 332211110000012345688999999999999999999999999877665544444333 57999999999999987
Q ss_pred HHHHHHHhcCceEEecC-CCCh---hHHHHHHHHhcccEEEEehHHHHHHhcCCCCC----CCCCCceeEEE--ecCCCh
Q psy8225 266 LGIGQCLLGGSTVVIRS-KFSA---SNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKP----EDTQHSVKMMI--GNGLRP 335 (479)
Q Consensus 266 ~~~~~~l~~G~~~v~~~-~~~~---~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~----~~~l~~lr~~~--G~~l~~ 335 (479)
..++.++..|+++++.+ .+.+ ..+++.++++++|++.++|.+++.|.+..... ...+++||.++ |+++++
T Consensus 281 ~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~ 360 (624)
T PRK12582 281 ANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSD 360 (624)
T ss_pred HHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCH
Confidence 77778899999999876 3333 34677788999999999999998887543221 12367899887 889999
Q ss_pred hhHHHHHHHh----C--cceeeeeccccccCccccc---CCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcc
Q psy8225 336 QVWEPFQKRF----G--LDRICEFYGATEGNANLMN---ADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLC 406 (479)
Q Consensus 336 ~~~~~~~~~~----~--~~~v~~~YG~tE~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~ 406 (479)
++.++|.+.+ | . .+++.||+||++.++.. ...+++++|+|+| +++++++
T Consensus 361 ~~~~~~~~~~~~~~g~~~-~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~p------g~~v~i~--------------- 418 (624)
T PRK12582 361 DLYERMQALAVRTTGHRI-PFYTGYGATETAPTTTGTHWDTERVGLIGLPLP------GVELKLA--------------- 418 (624)
T ss_pred HHHHHHHHHHHhhcCCCc-eEEeccccccccceeecccCCCCCCCCCCcCCC------CcEEEEc---------------
Confidence 9999998863 3 4 79999999999866542 2245678888766 7887764
Q ss_pred ccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEE-e---cCCcEEEecCCCCCC
Q psy8225 407 IPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIK-D---KFQYFYFKDRTGDAC 479 (479)
Q Consensus 407 ~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~-d---~dG~l~~~GR~~d~~ 479 (479)
+.|+.|||+++ |+ +++.|||++++.+.+.|+ .+|||+|||+|++ | +||+|+|+||+||++
T Consensus 419 ---~~G~~GEl~vr----g~-~v~~GY~~~p~~t~~~f~-----~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i 482 (624)
T PRK12582 419 ---PVGDKYEVRVK----GP-NVTPGYHKDPELTAAAFD-----EEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDF 482 (624)
T ss_pred ---cCCCceEEEEE----CC-cccccccCCccchhhhcC-----ccCCccccceEEecCCcCCCCceEEeccchhhE
Confidence 34678999998 88 899999999888777664 3799999999998 4 469999999999863
No 51
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.4e-52 Score=430.63 Aligned_cols=407 Identities=19% Similarity=0.219 Sum_probs=301.2
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.|.++.++|.+.++.+|+++|+++. +|| ||.++++++|++|.++|+++||+|+|+++|++++++++|||+++|+++
T Consensus 12 ~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~ 91 (579)
T PLN03102 12 VPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVL 91 (579)
T ss_pred ccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEE
Confidence 3456889999999999999999986 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCC------cceEEecCCCCCCCccCCCccccccccCCcCC
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIP------GISLYAAGTRRKPQAKVLPSTTLLDEELPEVS 194 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (479)
+|+++.++.+++.++++.++++++|++.+....+.++....+ .++++.++........ ......+.+++....
T Consensus 92 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 170 (579)
T PLN03102 92 NPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRP-SSEELDYECLIQRGE 170 (579)
T ss_pred eeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCC-cccccCHHHHHhccC
Confidence 999999999999999999999999998877665555433222 2334443321110000 001122333332221
Q ss_pred CCCCc--ccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHH
Q psy8225 195 AKSPT--EDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCL 272 (479)
Q Consensus 195 ~~~~~--~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l 272 (479)
..... ........+++++|+|||||||.||+|+++|+++............+...+++++.+|++|..|+. ..+.++
T Consensus 171 ~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~-~~~~~~ 249 (579)
T PLN03102 171 PTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWT-FTWGTA 249 (579)
T ss_pred CCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchh-HHHHHH
Confidence 11100 000123568899999999999999999999999765444443444566778899999999998874 445677
Q ss_pred hcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCccee
Q psy8225 273 LGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRI 350 (479)
Q Consensus 273 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v 350 (479)
..|+++++.+.+++..+++.|+++++|++.++|+++..|.+.........++++.++ |+++++.+.+++.+ +|. ++
T Consensus 250 ~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~g~-~i 327 (579)
T PLN03102 250 ARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-LGF-QV 327 (579)
T ss_pred HhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-cCC-eE
Confidence 888888888888899999999999999999999999999876543322334455444 77788888888764 687 89
Q ss_pred eeeccccccCcccccCC--C----CC--------CcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCce
Q psy8225 351 CEFYGATEGNANLMNAD--G----KV--------GAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGI 416 (479)
Q Consensus 351 ~~~YG~tE~~~~~~~~~--~----~~--------~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Ge 416 (479)
++.||+||+++.+.... . .+ ...|.+ .++. ..+.+.|++.++.+ +...++.||
T Consensus 328 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~--~~v~i~~~~~~~~v--------~~~~~~~GE 394 (579)
T PLN03102 328 MHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVS---ILGL--ADVDVKNKETQESV--------PRDGKTMGE 394 (579)
T ss_pred EeecCccccCccccccccccccccCCcccccccccCCCcc---cccc--cceEEecccccccc--------CCCCCCceE
Confidence 99999999875433211 0 00 011211 1122 23444565544422 112246899
Q ss_pred EEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 417 LIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 417 l~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+++ |+ +++.|||++++.+.+.|. +|||+|||+|++|+||++++.||.||++
T Consensus 395 l~v~----g~-~~~~GY~~~~~~t~~~f~------~gw~~TGDlg~~d~dG~l~i~GR~~d~i 446 (579)
T PLN03102 395 IVIK----GS-SIMKGYLKNPKATSEAFK------HGWLNTGDVGVIHPDGHVEIKDRSKDII 446 (579)
T ss_pred EEEE----Cc-chhhhhcCChhhhHhhhc------cCceecCceEEEcCCCeEEEEeccCcEE
Confidence 9998 77 899999999888877664 7899999999999999999999999974
No 52
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-52 Score=425.68 Aligned_cols=394 Identities=27% Similarity=0.439 Sum_probs=314.0
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGL-QRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
.++.++|..++ .|+++|+++. +|| ||.++++++|..|.++|+ .+||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v 80 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLV 80 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEE
Confidence 45778887764 6999999886 999 999999999999999999 7999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCccc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTED 201 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (479)
|++|.++.+++.++++.++++++|++.+....+.+.. .+.++++..+.. .+.+++.......+.
T Consensus 81 ~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~~~~~~i~~~~~------------~~~~~~~~~~~~~~~-- 144 (540)
T PRK13388 81 GLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--LPGVRVLDVDTP------------AYAELVAAAGALTPH-- 144 (540)
T ss_pred EecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--ccCceEEEccch------------hhhhhhccccCcCCC--
Confidence 9999999999999999999999999887665544331 223344333211 122222211111110
Q ss_pred ccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec
Q psy8225 202 IKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR 281 (479)
Q Consensus 202 ~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 281 (479)
....++++++++|||||||.||||.++|+++...+......+++..+|++++.+|++|.+|+...++.++..|+++++.
T Consensus 145 -~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~ 223 (540)
T PRK13388 145 -REVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALP 223 (540)
T ss_pred -CCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEEC
Confidence 2345689999999999999999999999999988887778888999999999999999998876666789999999998
Q ss_pred CCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEEecCCChhhHHHHHHHhCcceeeeeccccccCc
Q psy8225 282 SKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMIGNGLRPQVWEPFQKRFGLDRICEFYGATEGNA 361 (479)
Q Consensus 282 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~ 361 (479)
+.+++..+++.++++++|++..+|..+..+............+++.++|+.+.++..+.|.+.++. ++++.||+||++.
T Consensus 224 ~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~~G~~~~~~~~~~~~~~~~~-~l~~~YG~tE~~~ 302 (540)
T PRK13388 224 AKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVAFGNEASPRDIAEFSRRFGC-QVEDGYGSSEGAV 302 (540)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEEECCCCCHHHHHHHHHHhCC-ceecccccccccc
Confidence 888999999999999999999999999988876544333345778777888999999999999998 8999999999986
Q ss_pred ccccCC-CCCCcccccCccccCCCceeeEEeCCCCCC----ccccCCCccccccCCCCceEEEEeecCCcccccccccCc
Q psy8225 362 NLMNAD-GKVGAVGYIPYIAIPFYPVGLIKCDPETSE----PIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADK 436 (479)
Q Consensus 362 ~~~~~~-~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~----~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~ 436 (479)
++...+ ..++++|+|++ ++++ +|+++.. .+.|++|... .+.++.|||+++ +|+ +++.||+++
T Consensus 303 ~~~~~~~~~~~~vG~p~~------g~~i--~~~~~~~~~~~~~~d~~g~~~-~~~~~~GEl~v~---~g~-~~~~gY~~~ 369 (540)
T PRK13388 303 IVVREPGTPPGSIGRGAP------GVAI--YNPETLTECAVARFDAHGALL-NADEAIGELVNT---AGA-GFFEGYYNN 369 (540)
T ss_pred eeecCCCCCCCCCCCCCC------CcEE--EcCCCCccccceeccCccccc-cCCCcceEEEEe---cCC-cccccccCC
Confidence 655322 34567787665 5443 4444322 1345555321 145678999986 155 899999999
Q ss_pred chhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 437 KASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 437 ~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++.+++.+. +|||+|||+|++|+||++++.||+||++
T Consensus 370 ~~~t~~~~~------~g~~~TGD~~~~~~dg~l~i~GR~~d~i 406 (540)
T PRK13388 370 PEATAERMR------HGMYWSGDLAYRDADGWIYFAGRTADWM 406 (540)
T ss_pred hHHHHHHhh------cCceeccceEEEcCCCcEEEeccCCceE
Confidence 888877664 7899999999999999999999999974
No 53
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.4e-52 Score=423.67 Aligned_cols=391 Identities=25% Similarity=0.289 Sum_probs=322.5
Q ss_pred chhHHHHHHHhhcCCCccccEEE----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
.+|.+++..++ .+|+++|+.+. +|| ||.++++++|.+|++.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v 81 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFL 81 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEE
Confidence 35789999999 99999999874 999 9999999999999999999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCccc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTED 201 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (479)
|+++..+.+++.++++.+++++++++......+...........++..+.... ..+.+......... .
T Consensus 82 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~---~ 149 (504)
T PRK07514 82 PLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGT---------GSLLEAAAAAPDDF---E 149 (504)
T ss_pred ECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCc---------ccHHHhhhhcCccc---C
Confidence 99999999999999999999999998876665555433332222332222110 00111111111111 0
Q ss_pred ccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec
Q psy8225 202 IKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR 281 (479)
Q Consensus 202 ~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 281 (479)
......+++++++|||||||.||+|.++|+++...+......+++..+|++++.+|++|..|++..+..++..|+++++.
T Consensus 150 ~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 229 (504)
T PRK07514 150 TVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFL 229 (504)
T ss_pred cccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEEC
Confidence 13346788999999999999999999999999988887777888899999999999999999888888899999999999
Q ss_pred CCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeecccccc
Q psy8225 282 SKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEG 359 (479)
Q Consensus 282 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~ 359 (479)
+..++..+++.+ .++|.+..+|+++..++.........++++|.++ |+++++++.+.|.+.++. ++++.||+||+
T Consensus 230 ~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~-~~~~~YG~tE~ 306 (504)
T PRK07514 230 PKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTGH-AILERYGMTET 306 (504)
T ss_pred CCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhCC-cceeecccccc
Confidence 989999999988 4799999999999999887665555678899887 788999999999999998 89999999999
Q ss_pred CcccccC---CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCc
Q psy8225 360 NANLMNA---DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADK 436 (479)
Q Consensus 360 ~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~ 436 (479)
+...... ....+++|.|++ +++++++|++++. +++.|+.|||+++ |+ .++.||+++
T Consensus 307 ~~~~~~~~~~~~~~~~~G~~~~------~~~v~i~d~~~~~----------~~~~g~~Gel~i~----~~-~~~~gy~~~ 365 (504)
T PRK07514 307 NMNTSNPYDGERRAGTVGFPLP------GVSLRVTDPETGA----------ELPPGEIGMIEVK----GP-NVFKGYWRM 365 (504)
T ss_pred cccccCCccccccCcccccCCC------CcEEEEEECCCCC----------CCCCCCceEEEEe----cC-CccccccCC
Confidence 8655432 223455666554 7999999987777 5688999999998 77 899999999
Q ss_pred chhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 437 KASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 437 ~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++.+++.|. .++||+|||+|++|++|++++.||.||++
T Consensus 366 ~~~~~~~~~-----~~~~~~TGDl~~~~~~g~~~~~GR~~~~i 403 (504)
T PRK07514 366 PEKTAEEFR-----ADGFFITGDLGKIDERGYVHIVGRGKDLI 403 (504)
T ss_pred chhhhhhcc-----cCCCeeecceEEEcCCccEEEeccccceE
Confidence 887776654 27899999999999999999999999974
No 54
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.8e-53 Score=436.95 Aligned_cols=389 Identities=17% Similarity=0.179 Sum_probs=301.9
Q ss_pred chhHHHHHHHhhcCCCccccEE-----------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY-----------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGL 113 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~-----------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~ 113 (479)
.++.++|+++++.+|+++|+++ . +|| ||.++++++|++|.+. +++||+|+++++|+++|++++|||
T Consensus 21 ~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA~ 99 (631)
T PRK07769 21 TNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFGA 99 (631)
T ss_pred CCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHHH
Confidence 5689999999999999999985 2 999 9999999999999987 899999999999999999999999
Q ss_pred hhcCceeeee-cCCcc--hHHHHHHHHhccceEEEeChhhHHHHHHhhccCCc---ceEEecCCCCCCCccCCCcccccc
Q psy8225 114 SKIGVVAAFI-NTNQR--QHILIHSIKVAECKAIIYGAELSEALTEVKDSIPG---ISLYAAGTRRKPQAKVLPSTTLLD 187 (479)
Q Consensus 114 ~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 187 (479)
+++|++++|+ ++..+ .+++.+++++++++++|++.+..+.+.+.....+. ..++..+...
T Consensus 100 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 165 (631)
T PRK07769 100 LYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVP-------------- 165 (631)
T ss_pred HHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccccc--------------
Confidence 9999999999 45554 67899999999999999988766555443332221 1222221100
Q ss_pred ccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHH
Q psy8225 188 EELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLG 267 (479)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~ 267 (479)
.... .... .....++++++|+|||||||.||||+++|+++...+......+++..++++++.+|++|.+|+..
T Consensus 166 ~~~~---~~~~---~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~- 238 (631)
T PRK07769 166 DEVG---ATWV---PPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLIT- 238 (631)
T ss_pred cccc---cccC---CCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHH-
Confidence 0000 0000 02345688999999999999999999999999988877777788889999999999999999865
Q ss_pred HHHHHhcCceEEecC--CC--ChhHHHHHHHHhcc---cEEEEehHHHHHHhcC---CC--CCCCCCCceeEEE--ecCC
Q psy8225 268 IGQCLLGGSTVVIRS--KF--SASNFWKDCIKYNC---TVAQYIGEMCRYLLAV---PE--KPEDTQHSVKMMI--GNGL 333 (479)
Q Consensus 268 ~~~~l~~G~~~v~~~--~~--~~~~~~~~i~~~~~---t~~~~~p~~l~~l~~~---~~--~~~~~l~~lr~~~--G~~l 333 (479)
++.+++.|+++++.. .+ ++..+++.++++++ +.+..+|+++..+... .. ....++++||.++ |+++
T Consensus 239 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l 318 (631)
T PRK07769 239 VLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPV 318 (631)
T ss_pred HHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCC
Confidence 445666788887764 34 88999999999886 7888999887766542 11 1134678999877 7889
Q ss_pred ChhhHHHHHHHhC---c--ceeeeeccccccCcccccCCCC------------------------------CCcccccCc
Q psy8225 334 RPQVWEPFQKRFG---L--DRICEFYGATEGNANLMNADGK------------------------------VGAVGYIPY 378 (479)
Q Consensus 334 ~~~~~~~~~~~~~---~--~~v~~~YG~tE~~~~~~~~~~~------------------------------~~~~g~~~~ 378 (479)
++++.++|.+.|+ . ..+++.||+||++..+...+.. ..++|+|.
T Consensus 319 ~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~- 397 (631)
T PRK07769 319 SPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVG- 397 (631)
T ss_pred CHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcC-
Confidence 9999999999883 2 2599999999987654422110 12444443
Q ss_pred cccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhc----------
Q psy8225 379 IAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVY---------- 448 (479)
Q Consensus 379 ~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~---------- 448 (479)
++.+++++|+++++ +++.|+.|||+++ || +++.|||++++.+.+.|.+..
T Consensus 398 -----~~~~~~ivd~~~g~----------~~~~ge~GEl~v~----gp-~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~ 457 (631)
T PRK07769 398 -----VSEWAVIVDPETAS----------ELPDGQIGEIWLH----GN-NIGTGYWGKPEETAATFQNILKSRLSESHAE 457 (631)
T ss_pred -----CCcEEEEEcCCCCc----------CCCCCCEEEEEec----CC-CccccccCChhHHHHHHhhhccccccccccc
Confidence 47888999977776 5688999999998 88 999999999888877664211
Q ss_pred --cCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 449 --SHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 449 --~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
..++|||+|||+|+++ ||+|+|+||+||++
T Consensus 458 ~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~I 489 (631)
T PRK07769 458 GAPDDALWVRTGDYGVYF-DGELYITGRVKDLV 489 (631)
T ss_pred CcccCCCeeeccccccEE-CCEEEEEcccccEE
Confidence 1235899999999995 99999999999985
No 55
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-52 Score=422.56 Aligned_cols=383 Identities=26% Similarity=0.483 Sum_probs=308.7
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSK-GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~-gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
.++.++|.+++. ++++|+.+. +|| ||.+++.++|++|+++ |++++++|+++++|+++++++++||+++|++++
T Consensus 5 ~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v 82 (529)
T PRK07867 5 PTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPV 82 (529)
T ss_pred ccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence 457889988875 788998886 999 9999999999999997 899999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCccc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTED 201 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (479)
|+++..+.+++.+++++++++++|+++.....+..+. +.+.++..... .+.+.+.........
T Consensus 83 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~~~~~~~~~~~------------~~~~~l~~~~~~~~~-- 145 (529)
T PRK07867 83 GLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---PGVRVINVDSP------------AWADELAAHRDAEPP-- 145 (529)
T ss_pred EecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---cCceEEEeccc------------cHHHHhcccCCCCCC--
Confidence 9999999999999999999999999987766544432 22333322210 122222211111111
Q ss_pred ccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec
Q psy8225 202 IKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR 281 (479)
Q Consensus 202 ~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 281 (479)
.....++++++++|||||||.||+|+++|+++...+......+++..+|++++.+|++|.++++..+..++..|+++++.
T Consensus 146 ~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 225 (529)
T PRK07867 146 FRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALR 225 (529)
T ss_pred cccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEec
Confidence 13346788999999999999999999999999888888778888899999999999999999877788889999999998
Q ss_pred CCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE-ecCCChhhHHHHHHHhCcceeeeeccccccC
Q psy8225 282 SKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI-GNGLRPQVWEPFQKRFGLDRICEFYGATEGN 360 (479)
Q Consensus 282 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~-G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~ 360 (479)
+.+++..+++.++++++|++..+|+.+..++..........+++|.++ |+.+++ ...+|.+.+|. ++++.||+||++
T Consensus 226 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~~~gg~~~~~-~~~~~~~~~g~-~l~~~YG~TE~~ 303 (529)
T PRK07867 226 RKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRIVYGNEGAPG-DIARFARRFGC-VVVDGFGSTEGG 303 (529)
T ss_pred CCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEEEecCCCChH-HHHHHHHHhCC-cEEEeecccccc
Confidence 889999999999999999999999999988876554333456888777 455554 46788888998 899999999998
Q ss_pred cccccC-CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCC------------CceEEE-EeecCCc
Q psy8225 361 ANLMNA-DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEE------------PGILIG-MIKESRA 426 (479)
Q Consensus 361 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~------------~Gel~v-~~~~~~~ 426 (479)
..+... ...++++|.|.+ + +.++|+++++ +|+.|+ .|||++ + |+
T Consensus 304 ~~~~~~~~~~~~~~g~~~~------~--~~i~~~~~~~----------~~~~g~~~~~~~~~~~~~~Gel~i~~----g~ 361 (529)
T PRK07867 304 VAITRTPDTPPGALGPLPP------G--VAIVDPDTGT----------ECPPAEDADGRLLNADEAIGELVNTA----GP 361 (529)
T ss_pred cccccCCCCCCCCcCCCCC------C--EEEEECCCCC----------CCCCCccccccccccCCcceEEEEec----CC
Confidence 655432 234466777654 5 5566766555 345555 899998 7 77
Q ss_pred ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 427 ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 427 ~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++.||+++++.+.+.+. +|||+|||+|++|++|++++.||.||++
T Consensus 362 -~~~~gy~~~~~~~~~~~~------~g~~~TGD~~~~~~~g~l~~~GR~~d~i 407 (529)
T PRK07867 362 -GGFEGYYNDPEADAERMR------GGVYWSGDLAYRDADGYAYFAGRLGDWM 407 (529)
T ss_pred -cccccccCChHhhhhhhc------CCeEeeccEEEEeCCCcEEEeccccCeE
Confidence 899999999887776553 7899999999999999999999999974
No 56
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2e-52 Score=429.51 Aligned_cols=403 Identities=25% Similarity=0.327 Sum_probs=323.6
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCc
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGV 118 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 118 (479)
...++.++|.+.++.+|+++|+++. +|| ||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 14 ~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~ 93 (559)
T PRK08315 14 LEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGA 93 (559)
T ss_pred hhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCe
Confidence 3356899999999999999999873 999 9999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCcchHHHHHHHHhccceEEEeChhhH-----HHHHHhhccC-------------Ccc-eEEecCCCCCCCccC
Q psy8225 119 VAAFINTNQRQHILIHSIKVAECKAIIYGAELS-----EALTEVKDSI-------------PGI-SLYAAGTRRKPQAKV 179 (479)
Q Consensus 119 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~-------------~~~-~~~~~~~~~~~~~~~ 179 (479)
+++|++|..+.+++..+++.+++++++++.... ..+.+..... +.. .++..+....
T Consensus 94 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 168 (559)
T PRK08315 94 ILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKH----- 168 (559)
T ss_pred EEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCC-----
Confidence 999999999999999999999999999976432 1222221111 111 1222221110
Q ss_pred CCccccccccCCcCCC---CCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEec
Q psy8225 180 LPSTTLLDEELPEVSA---KSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTL 256 (479)
Q Consensus 180 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~ 256 (479)
.....++++...... ............+++++++|||||||.||+|.++|+++...+......++++.+|+++..+
T Consensus 169 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~ 247 (559)
T PRK08315 169 -PGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCIPV 247 (559)
T ss_pred -cccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEEec
Confidence 111223322221110 0000011234567899999999999999999999999998888888888899999999999
Q ss_pred cchhhhhhHHHHHHHHhcCceEEe-cCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCC
Q psy8225 257 PLYHTAGGLLGIGQCLLGGSTVVI-RSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGL 333 (479)
Q Consensus 257 pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l 333 (479)
|++|.+|+...++.++..|+++++ ...+++..+++.+.++++|++.++|+++..++.........++++|.++ |+++
T Consensus 248 p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~ 327 (559)
T PRK08315 248 PLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPC 327 (559)
T ss_pred CcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCC
Confidence 999999988888999999999984 4568999999999999999999999999988877655555688999865 8999
Q ss_pred ChhhHHHHHHHhCcceeeeeccccccCcccccCC------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccc
Q psy8225 334 RPQVWEPFQKRFGLDRICEFYGATEGNANLMNAD------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCI 407 (479)
Q Consensus 334 ~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~ 407 (479)
++++.+.+.+.++..++++.||+||++.++.... .++.++|+|++ ++++.++|+++++
T Consensus 328 ~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~------~~~v~i~d~~~~~---------- 391 (559)
T PRK08315 328 PIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALP------HLEVKIVDPETGE---------- 391 (559)
T ss_pred CHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCC------CcEEEEEcCccCC----------
Confidence 9999999999998856999999999987654322 23556677655 7999999988676
Q ss_pred cccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 408 PCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 408 ~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|+.|+.|||+++ |+ +++.||++++..++..+. .++||+|||+|++|+||+++++||.||++
T Consensus 392 ~~~~g~~GEl~v~----g~-~~~~gy~~~~~~~~~~~~-----~~~~~~TGD~~~~~~dg~~~~~GR~d~~i 453 (559)
T PRK08315 392 TVPRGEQGELCTR----GY-SVMKGYWNDPEKTAEAID-----ADGWMHTGDLAVMDEEGYVNIVGRIKDMI 453 (559)
T ss_pred cCCCCCceEEEEE----Cc-hhhhhhcCChhHHhhcCC-----CCCCEEccceEEEcCCceEEEEeeccceE
Confidence 5688999999998 77 899999998877765542 37899999999999999999999999974
No 57
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=5.6e-52 Score=424.77 Aligned_cols=399 Identities=21% Similarity=0.285 Sum_probs=319.8
Q ss_pred cccchhHHHHHHHhhcCCCccccEEE----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCc
Q psy8225 44 TLPTYARPLFVRTIREVPMTGAYKYT----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGV 118 (479)
Q Consensus 44 ~~~~~l~~~l~~~~~~~p~~~a~~~~----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 118 (479)
+...++.++|++.++.+|+++|+++. +|| ||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 20 ~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 99 (547)
T PRK06087 20 WGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGA 99 (547)
T ss_pred CCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCc
Confidence 34467899999999999999999974 999 9999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCcchHHHHHHHHhccceEEEeChh-----hHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCc
Q psy8225 119 VAAFINTNQRQHILIHSIKVAECKAIIYGAE-----LSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPE 192 (479)
Q Consensus 119 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (479)
+++|+++.++.+++.++++.+++++++++.. ..+.+.......+..+ ++..+..... .....+.+++..
T Consensus 100 ~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 174 (547)
T PRK06087 100 VSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPA-----TSSLSLSQIIAD 174 (547)
T ss_pred EEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCC-----cCccCHHHHhcc
Confidence 9999999999999999999999999999753 2233333333333322 3332221110 011122333222
Q ss_pred CCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHH
Q psy8225 193 VSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCL 272 (479)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l 272 (479)
...... ......+++++|+|||||||.||+|+++|.++..........+++..++++++.+|++|.+|+...++.++
T Consensus 175 ~~~~~~---~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l 251 (547)
T PRK06087 175 YEPLTT---AITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPF 251 (547)
T ss_pred CCcccC---CCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHH
Confidence 111111 12345688999999999999999999999999888777777778899999999999999999888888899
Q ss_pred hcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCccee
Q psy8225 273 LGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRI 350 (479)
Q Consensus 273 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v 350 (479)
..|+++++.+.+++..+++.+.+++++++..+|+.+..+++........++++|.++ |+++++++.+.+.+. +. ++
T Consensus 252 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~-~~-~l 329 (547)
T PRK06087 252 LIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR-GI-KL 329 (547)
T ss_pred hcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc-CC-cE
Confidence 999999999999999999999999999999888877777766555555678999887 888999999887764 87 89
Q ss_pred eeeccccccCcccccCC-----CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCC
Q psy8225 351 CEFYGATEGNANLMNAD-----GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESR 425 (479)
Q Consensus 351 ~~~YG~tE~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~ 425 (479)
++.||+||++....... ...+++|.|++ ++.++++|++ +. +++.|+.|||+++ |
T Consensus 330 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~~-~~----------~~~~g~~Gel~v~----g 388 (547)
T PRK06087 330 LSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAA------GVEIKVVDEA-RK----------TLPPGCEGEEASR----G 388 (547)
T ss_pred EEEecccccCCccccCCCcchhhcCCcCCccCC------CceEEEEcCC-CC----------CCcCCCcceEEEe----c
Confidence 99999999986654321 12345666655 7888888844 44 5688999999998 7
Q ss_pred cccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 426 AESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 426 ~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+ .++.||+++++.+...+. .+|||+|||+|++|++|++++.||.||++
T Consensus 389 ~-~~~~gy~~~~~~~~~~~~-----~~g~~~TGDl~~~~~~g~l~i~GR~~d~i 436 (547)
T PRK06087 389 P-NVFMGYLDEPELTARALD-----EEGWYYSGDLCRMDEAGYIKITGRKKDII 436 (547)
T ss_pred c-cccccccCCHHHHHHHhC-----CCCCcCcCceEEECCCCCEEEEecchhhh
Confidence 7 899999999877766553 37899999999999999999999999874
No 58
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.1e-52 Score=422.68 Aligned_cols=400 Identities=23% Similarity=0.342 Sum_probs=333.8
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.+.++.++|.++++.+|+++|+.+. +|| ||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 4 ~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~ 83 (521)
T PRK06187 4 YPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVL 83 (521)
T ss_pred ccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 5678999999999999999999988 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCcCCCCCCc
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPT 199 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (479)
+|+++..+.+++.++++.+++++++++.+....+.++....+.++ ++..++... . ........+.+++........
T Consensus 84 v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~- 160 (521)
T PRK06187 84 HPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPA-A-PLAPEVGEYEELLAAASDTFD- 160 (521)
T ss_pred EecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccc-c-ccccccccHHHHhhcCCccCC-
Confidence 999999999999999999999999999888777777666665443 333332221 0 011223334444333222211
Q ss_pred ccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEE
Q psy8225 200 EDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVV 279 (479)
Q Consensus 200 ~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v 279 (479)
......+++++++|||||||.||+|.++|.++..........++++.++++++.+|++|.+++...+. ++..|++++
T Consensus 161 --~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~l~~G~~~v 237 (521)
T PRK06187 161 --FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYL-ALMAGAKQV 237 (521)
T ss_pred --CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHH-HHHhCCEEE
Confidence 13456678999999999999999999999999988887777888999999999999999998765555 899999999
Q ss_pred ecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeecccc
Q psy8225 280 IRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGAT 357 (479)
Q Consensus 280 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~t 357 (479)
+.+.+++..+++.++++++|.+.++|++++.|.+........++++|.++ |+++++++++++.+.++. ++++.||+|
T Consensus 238 ~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~-~v~~~YG~t 316 (521)
T PRK06187 238 IPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKFGI-DLVQGYGMT 316 (521)
T ss_pred ecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhCc-chheeeccC
Confidence 99888999999999999999999999999999988876566788999877 899999999999999987 999999999
Q ss_pred ccCcccccCCC---------CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccC--CCCceEEEEeecCCc
Q psy8225 358 EGNANLMNADG---------KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKA--EEPGILIGMIKESRA 426 (479)
Q Consensus 358 E~~~~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~--~~~Gel~v~~~~~~~ 426 (479)
|+++++..... ..+++|.|++ ++.++++|++ +. +++. |+.|||+++ ++
T Consensus 317 E~~~~~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~~~~-~~----------~~~~~~g~~Gel~v~----~~ 375 (521)
T PRK06187 317 ETSPVVSVLPPEDQLPGQWTKRRSAGRPLP------GVEARIVDDD-GD----------ELPPDGGEVGEIIVR----GP 375 (521)
T ss_pred ccCcccccCCcccccccccccCCccccccC------CeEEEEECCC-CC----------CCCCCCCCeeEEEEE----Cc
Confidence 99876553321 3455666554 7899999965 44 3455 899999998 77
Q ss_pred ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 427 ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 427 ~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.++.||+++++.+.+.+. ++||+|||+|++++||++++.||.||++
T Consensus 376 -~~~~~y~~~~~~~~~~~~------~~~~~tGD~~~~~~~g~~~~~GR~~~~i 421 (521)
T PRK06187 376 -WLMQGYWNRPEATAETID------GGWLHTGDVGYIDEDGYLYITDRIKDVI 421 (521)
T ss_pred -chhhhhcCCHHHHHHHhh------CCceeccceEEEcCCCCEEEeecccceE
Confidence 899999998877776664 6799999999999999999999999874
No 59
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-52 Score=427.82 Aligned_cols=405 Identities=22% Similarity=0.276 Sum_probs=317.8
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|+++++.+|+++|+.+. +|| ||.+++.++|++|.++|+++|++|+++++|+++++++++||+++|++++|
T Consensus 33 ~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 112 (567)
T PRK06178 33 RPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVP 112 (567)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEee
Confidence 56899999999999999999886 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCc----cCCCc-------cccccccCC
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQA----KVLPS-------TTLLDEELP 191 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~ 191 (479)
++|..+.+++.+++++++++++++++...+.+.+.........+++......... ..... ...+.++..
T Consensus 113 l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (567)
T PRK06178 113 VSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDLLP 192 (567)
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEeccccccccccccccccccccccccccccccHHH
Confidence 9999999999999999999999999887776665544332122222211110000 00000 000111111
Q ss_pred cCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh-hcCCCCCCeEEEeccchhhhhhHHHHHH
Q psy8225 192 EVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY-QTGLTSDDVVYTTLPLYHTAGGLLGIGQ 270 (479)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~d~~~~~~pl~h~~g~~~~~~~ 270 (479)
................+++++++|||||||.||+|++||.++...+..... ......++++++.+|++|.+|+...++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 272 (567)
T PRK06178 193 ALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAGENFGLLF 272 (567)
T ss_pred HhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHHHHHHHHH
Confidence 110000000012345789999999999999999999999998876554332 3567889999999999999998777888
Q ss_pred HHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE----ecCCChhhHHHHHHHhC
Q psy8225 271 CLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI----GNGLRPQVWEPFQKRFG 346 (479)
Q Consensus 271 ~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~----G~~l~~~~~~~~~~~~~ 346 (479)
++..|+++++.+++++..+++.++++++|.+..+|..+..+..........+++++.+. |+.+++++.+.|++.+|
T Consensus 273 ~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g 352 (567)
T PRK06178 273 PLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTG 352 (567)
T ss_pred HHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999988876554445567777653 57899999999999999
Q ss_pred cceee-eeccccccCccccc-C---------CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCc
Q psy8225 347 LDRIC-EFYGATEGNANLMN-A---------DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPG 415 (479)
Q Consensus 347 ~~~v~-~~YG~tE~~~~~~~-~---------~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~G 415 (479)
. .++ +.||+||++..+.. . ...++++|.|+| +++++++|+++++ +|+.|+.|
T Consensus 353 ~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~------g~~v~v~d~~~~~----------~~~~g~~G 415 (567)
T PRK06178 353 S-VLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVP------GTEFKICDFETGE----------LLPLGAEG 415 (567)
T ss_pred C-cccccccccccccccceeccccccCccccccCCcccccccC------CcEEEEEcCCCCC----------cCCCCCce
Confidence 8 555 57999998754321 1 123345666554 8999999977776 56889999
Q ss_pred eEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 416 ILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 416 el~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||+++ |+ +++.||+++++.+...++ +|||+|||+|++++||+++++||+||++
T Consensus 416 el~v~----g~-~v~~gY~~~~~~~~~~~~------dg~~~TGDl~~~~~~g~l~i~GR~~d~i 468 (567)
T PRK06178 416 EIVVR----TP-SLLKGYWNKPEATAEALR------DGWLHTGDIGKIDEQGFLHYLGRRKEML 468 (567)
T ss_pred EEEEE----CC-cccccccCChhhhhhccc------CCceeecceEEEecCCeEEEEecccccE
Confidence 99998 77 899999999887776554 7899999999999999999999999974
No 60
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.9e-52 Score=419.88 Aligned_cols=374 Identities=23% Similarity=0.324 Sum_probs=310.0
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|.+++..+|+++|+++. +|| ||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 35789999999999999999987 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
+++..+.+++.++++.++++++++++........... . .++++......... ..
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~----~--------------------~~~~~~~~~~~~~~--~~ 135 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS----V--------------------KFAELMNGPKEEAE--IQ 135 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc----c--------------------cHHHHhhcccccCC--CC
Confidence 9999999999999999999999998765443222100 0 01111111100000 01
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
.....+++++++|||||||.||+|+++|.++...+......++++.+|++++.+|++|.+|+ ..++.++..|+++++.+
T Consensus 136 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~ 214 (483)
T PRK03640 136 EEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGL-SILMRSVIYGMRVVLVE 214 (483)
T ss_pred CCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHH-HHHHHHHhcCCEEEecC
Confidence 23456889999999999999999999999998877766667889999999999999999986 44677889999999999
Q ss_pred CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccC
Q psy8225 283 KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGN 360 (479)
Q Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~ 360 (479)
.+++..+++.++++++|++.++|+++..|.+..... ....++|.++ |+++++++++.+++ ++. ++++.||+||++
T Consensus 215 ~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~-~~~-~~~~~YG~tE~~ 291 (483)
T PRK03640 215 KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKE-KGI-PVYQSYGMTETA 291 (483)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHH-hCC-CeeeeeccCccc
Confidence 999999999999999999999999999998664432 2346888877 88999999988876 487 899999999987
Q ss_pred cccccC-----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccC
Q psy8225 361 ANLMNA-----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYAD 435 (479)
Q Consensus 361 ~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~ 435 (479)
..+... ...++++|+|++ ++++++.|+. + +++.|+.|||+++ || +++.||++
T Consensus 292 ~~~~~~~~~~~~~~~~~vG~p~~------~~~~~i~~~~--~----------~~~~g~~Gel~v~----g~-~~~~gy~~ 348 (483)
T PRK03640 292 SQIVTLSPEDALTKLGSAGKPLF------PCELKIEKDG--V----------VVPPFEEGEIVVK----GP-NVTKGYLN 348 (483)
T ss_pred ccccccCcccccccCCCcccccC------CcEEEEecCC--C----------cCCCCCceEEEEE----Cc-chhhhhcC
Confidence 654321 234577777665 7888887742 3 5788999999998 88 99999999
Q ss_pred cchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 436 KKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 436 ~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++.+...+. +|||+|||++++++||++++.||+||++
T Consensus 349 ~~~~~~~~~~------~~~~~tGDl~~~~~~g~l~~~GR~~~~i 386 (483)
T PRK03640 349 REDATRETFQ------DGWFKTGDIGYLDEEGFLYVLDRRSDLI 386 (483)
T ss_pred CHHHHHHHHh------cCCeeccceEEEcCCCCEEEeecccCeE
Confidence 9887776654 7899999999999999999999999974
No 61
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=7.5e-52 Score=421.28 Aligned_cols=403 Identities=19% Similarity=0.225 Sum_probs=323.2
Q ss_pred hhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeee
Q psy8225 48 YARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 48 ~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l 123 (479)
++.++|++.++.+|+++|+.+. +|| ||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 3678999999999999999987 999 999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcc-eEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGI-SLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
++.++.+++.++++.++++++|++......+......++.. .++.+++..... ........|+++....... ..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~ 155 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHAS-EGGGESPSWPKLLALGDAD----PP 155 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCccccc-CCccccccHHHhhcccccc----cc
Confidence 99999999999999999999999887665554444443332 233333221100 0011122344443322111 11
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
.....+++++++|||||||.||+|.+||.++...+......+.+..+|++++.+|++|.+|+ ..++.++..|+++++.+
T Consensus 156 ~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~ 234 (515)
T TIGR03098 156 HPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGF-NQLTTAFYVGATVVLHD 234 (515)
T ss_pred CCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHH-HHHHHHHHcCCEEEEcC
Confidence 23356789999999999999999999999999888877777788999999999999999987 46788999999999998
Q ss_pred CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccC
Q psy8225 283 KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGN 360 (479)
Q Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~ 360 (479)
.+++..+++.++++++|++.++|+++..|.+..... ..++++|.++ |+++++++.+++++.++...+++.||+||++
T Consensus 235 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 313 (515)
T TIGR03098 235 YLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPE-SAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAF 313 (515)
T ss_pred CCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCC-CCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeecccccc
Confidence 899999999999999999999999999988753322 3567888876 8899999999999999544899999999987
Q ss_pred cccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCc
Q psy8225 361 ANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADK 436 (479)
Q Consensus 361 ~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~ 436 (479)
...... ..+++++|+|++ ++.++++|++ +. +++.|+.|||+++ |+ .++.||+++
T Consensus 314 ~~~~~~~~~~~~~~~~vG~~~~------~~~~~i~~~~-~~----------~~~~~~~Gel~v~----g~-~~~~gy~~~ 371 (515)
T TIGR03098 314 RSTYLPPEEVDRRPDSIGKAIP------NAEVLVLRED-GS----------ECAPGEEGELVHR----GA-LVAMGYWND 371 (515)
T ss_pred ceEecccccccCCCCCcceecC------CCEEEEECCC-CC----------CCCCCCceEEEEc----Cc-hhhccccCC
Confidence 544322 235567787665 7899988854 54 5678899999998 77 899999998
Q ss_pred chhHHHHHhhh------ccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 437 KASEKKILRNV------YSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 437 ~~~~~~~~~~~------~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+..+...+.+. +..+++||+|||+|++|+||++++.||.||++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i 420 (515)
T TIGR03098 372 PEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMI 420 (515)
T ss_pred chhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccce
Confidence 87766555421 11124699999999999999999999999975
No 62
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-53 Score=441.87 Aligned_cols=375 Identities=20% Similarity=0.227 Sum_probs=304.1
Q ss_pred hhHHHHHHHhhc--CCCccccEEE--Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 48 YARPLFVRTIRE--VPMTGAYKYT--VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 48 ~l~~~l~~~~~~--~p~~~a~~~~--~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
++.++|.+++.. +|+++|+++. +|| ||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vp 84 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAADVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFL 84 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEecCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEe
Confidence 478889988886 7999999876 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
++|.++.+++.+++++++++++|++......+... .+.. ....+.......+. ..
T Consensus 85 i~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-------~~~~-----------------~~~~~~~~~~~~~~-~~ 139 (705)
T PRK06060 85 ANPELHRDDHALAARNTEPALVVTSDALRDRFQPS-------RVAE-----------------AAELMSEAARVAPG-GY 139 (705)
T ss_pred cCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc-------ccch-----------------hhhhhhhccccCCC-CC
Confidence 99999999999999999999999987544322110 0000 00000000000000 00
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhh-hhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGR-YQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR 281 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~-~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 281 (479)
....++++++++|||||||.||||+++|+++...+.... ..+++..++++++..|++|.+++...++.++..|+++++.
T Consensus 140 ~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~ 219 (705)
T PRK06060 140 EPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVIN 219 (705)
T ss_pred CCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEe
Confidence 223467899999999999999999999999987766553 4567888999999999999988767778889999999987
Q ss_pred C-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 282 S-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 282 ~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
+ .+++..++..+.++++|+++++|+++..+.+.... ..++++|.++ |+++++++.+++.+.++..++++.||+||
T Consensus 220 ~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~--~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE 297 (705)
T PRK06060 220 SAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP--DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTE 297 (705)
T ss_pred CCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc--ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccc
Confidence 6 57888899999999999999999999998875432 3467899876 89999999999999996448999999999
Q ss_pred cCcccccC---CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccC
Q psy8225 359 GNANLMNA---DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYAD 435 (479)
Q Consensus 359 ~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~ 435 (479)
++...... ..+++++|+|++ +++++++|++ ++ +++.|+.|||+++ |+ +++.||+|
T Consensus 298 ~~~~~~~~~~~~~~~~~iG~p~~------~~~v~i~d~~-g~----------~~~~g~~GEl~i~----g~-~v~~GY~~ 355 (705)
T PRK06060 298 VGQTFVSNRVDEWRLGTLGRVLP------PYEIRVVAPD-GT----------TAGPGVEGDLWVR----GP-AIAKGYWN 355 (705)
T ss_pred cCceEEeccCCCCCcCcccccCC------CcEEEEECCC-CC----------CCCCCCceEEEEc----cc-hhhhhhhC
Confidence 98554322 234566777665 7899999865 44 5688999999998 77 89999999
Q ss_pred cchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 436 KKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 436 ~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++.+. .++|||+|||+|++|+||+++++||+||++
T Consensus 356 ~~~~~~--------~~~~~~~TGDl~~~~~dG~l~~~GR~dd~i 391 (705)
T PRK06060 356 RPDSPV--------ANEGWLDTRDRVCIDSDGWVTYRCRADDTE 391 (705)
T ss_pred CCcccc--------cCCCcEECCeeEEECCCceEEEecccCceE
Confidence 876431 137999999999999999999999999974
No 63
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.4e-53 Score=443.70 Aligned_cols=397 Identities=18% Similarity=0.199 Sum_probs=303.5
Q ss_pred cchhHHHHHHHhhcCCC-ccccEE---E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce
Q psy8225 46 PTYARPLFVRTIREVPM-TGAYKY---T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~-~~a~~~---~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 119 (479)
..++.++|.++++++|+ ++|+.+ . +|| ||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++
T Consensus 203 ~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~v 281 (718)
T PRK08043 203 RETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRRI 281 (718)
T ss_pred CCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCCc
Confidence 37789999999999998 588865 2 999 9999999999999987 599999999999999999999999999999
Q ss_pred eeeecCCcchHHHHHHHHhccceEEEeChhhHHHHH--HhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCC
Q psy8225 120 AAFINTNQRQHILIHSIKVAECKAIIYGAELSEALT--EVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKS 197 (479)
Q Consensus 120 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (479)
++|+++.++.+++.+++++++++++|++.+..+... ......+...++...+.... ...........+... . .
T Consensus 282 ~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~--~-~- 356 (718)
T PRK08043 282 PAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDD-VTTADKLWIFAHLLM--P-R- 356 (718)
T ss_pred ccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhh-cchhHHHHHHHHHhC--C-c-
Confidence 999999999999999999999999999876543211 11111122223322211000 000000000000000 0 0
Q ss_pred CcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCce
Q psy8225 198 PTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGST 277 (479)
Q Consensus 198 ~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~ 277 (479)
.. .....++++++++|||||||.||||++||+++...+......+++..+|++++.+|++|.+|+...++.++..|++
T Consensus 357 ~~--~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~ 434 (718)
T PRK08043 357 LA--QVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAE 434 (718)
T ss_pred cc--cCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCE
Confidence 00 0233568999999999999999999999999998887777777889999999999999999987778889999999
Q ss_pred EEecCC-CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeec
Q psy8225 278 VVIRSK-FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFY 354 (479)
Q Consensus 278 ~v~~~~-~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~Y 354 (479)
+++.+. +++..+++.+.++++|++..+|+++..+.+.. ...++++||.++ |+++++++.+.|++.+|. ++++.|
T Consensus 435 vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~-~l~~~Y 511 (718)
T PRK08043 435 VFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKFGL-RILEGY 511 (718)
T ss_pred EEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHcCC-Ceeccc
Confidence 998764 57778889999999999999999998876642 223578899877 789999999999999998 899999
Q ss_pred cccccCcccccC---CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccc
Q psy8225 355 GATEGNANLMNA---DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFN 431 (479)
Q Consensus 355 G~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~ 431 (479)
|+||+++.+... ..+++++|+|+| +++++++|++. .++.|||+++ |+ +++.
T Consensus 512 G~TE~~~~~~~~~~~~~~~~svG~p~p------g~~~~i~d~~~---------------~~~~Gel~v~----g~-~v~~ 565 (718)
T PRK08043 512 GVTECAPVVSINVPMAAKPGTVGRILP------GMDARLLSVPG---------------IEQGGRLQLK----GP-NIMN 565 (718)
T ss_pred CcccccceEEecCCcccCCCCCCCcCC------CCeeEEecCCC---------------CCCceEEEEe----cC-Cccc
Confidence 999998655421 245677887765 78888887541 2356999998 88 9999
Q ss_pred cccCc--chhHH-HHHhhh-ccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 432 GYADK--KASEK-KILRNV-YSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 432 gY~~~--~~~~~-~~~~~~-~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|||+. ++.+. ....+. -...+|||+|||+|++|+||+++++||+||++
T Consensus 566 GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I 617 (718)
T PRK08043 566 GYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFA 617 (718)
T ss_pred cccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCee
Confidence 99983 33110 000000 00126899999999999999999999999985
No 64
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-51 Score=418.14 Aligned_cols=386 Identities=20% Similarity=0.221 Sum_probs=315.5
Q ss_pred hhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeee
Q psy8225 48 YARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 48 ~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l 123 (479)
++.++|.++++.+|+++|+++. +|| ||.+++.++|..|.+.|++++++|+++++|+++++++++||+++|++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l 82 (497)
T PRK06145 3 NLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPI 82 (497)
T ss_pred cHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEec
Confidence 4679999999999999999887 999 999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCccccc
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIK 203 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (479)
++..+.+++.++++.+++++++++.+....... . . ..+..+.... ..+..+...... ... ..
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~----~-~-~~~~~~~~~~---------~~~~~~~~~~~~-~~~--~~ 144 (497)
T PRK06145 83 NYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL----E-T-PKIVIDAAAQ---------ADSRRLAQGGLE-IPP--QA 144 (497)
T ss_pred ccccCHHHHHHHHHhcCCcEEEEccchhhhhhc----c-c-ceEEecCccc---------chhHHHhccCCC-CCC--CC
Confidence 999999999999999999999998765432210 0 1 1111111000 000000000000 000 12
Q ss_pred CCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC
Q psy8225 204 KNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK 283 (479)
Q Consensus 204 ~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~ 283 (479)
...++++++++|||||||.||+|+++|+++...+......+++..+++++...|++|.+++....+..+..|+++++.+.
T Consensus 145 ~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~ 224 (497)
T PRK06145 145 AVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHRE 224 (497)
T ss_pred CCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCc
Confidence 34668899999999999999999999999987666666667889999999999999999887766778899999999998
Q ss_pred CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCc
Q psy8225 284 FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNA 361 (479)
Q Consensus 284 ~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~ 361 (479)
+++..+++.++++++|.+.++|++++.++.........++++|.++ |+++++++++++.+.|+...+++.||+||++.
T Consensus 225 ~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~ 304 (497)
T PRK06145 225 FDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCS 304 (497)
T ss_pred CCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCC
Confidence 9999999999999999999999999999887665555678899877 88899999999999997658999999999986
Q ss_pred ccccC-----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCc
Q psy8225 362 NLMNA-----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADK 436 (479)
Q Consensus 362 ~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~ 436 (479)
.+... ...++++|+|++ +++++++|++ +. +++.|+.|||+++ |+ +++.||+++
T Consensus 305 ~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~~~~-~~----------~~~~~~~Gel~v~----g~-~~~~Gy~~~ 362 (497)
T PRK06145 305 GDTLMEAGREIEKIGSTGRALA------HVEIRIADGA-GR----------WLPPNMKGEICMR----GP-KVTKGYWKD 362 (497)
T ss_pred cceeccCccccccCCCcccCCC------CceEEEECCC-CC----------CCCCCCceEEEEE----Cc-chhhhhcCC
Confidence 54321 124566777665 7899988854 44 4578899999998 77 899999999
Q ss_pred chhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 437 KASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 437 ~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+..+.+.+. ++||+|||+|++|+||+++++||+||++
T Consensus 363 ~~~~~~~~~------~~~~~TGDl~~~~~~g~l~~~GR~~~~i 399 (497)
T PRK06145 363 PEKTAEAFY------GDWFRSGDVGYLDEEGFLYLTDRKKDMI 399 (497)
T ss_pred hHHHHHHHh------CCCeeccceEEEcCCCcEEEeccccceE
Confidence 887776654 7899999999999999999999999975
No 65
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-51 Score=424.07 Aligned_cols=400 Identities=22% Similarity=0.273 Sum_probs=320.9
Q ss_pred chhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.++.++|.+.++++|+++|+++. +|| ||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 18 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 97 (558)
T PRK12583 18 QTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAIL 97 (558)
T ss_pred CcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEE
Confidence 46899999999999999999874 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhH-----HHHHHhhcc-------------CCcce-EEecCCCCCCCccCCC
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELS-----EALTEVKDS-------------IPGIS-LYAAGTRRKPQAKVLP 181 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~-------------~~~~~-~~~~~~~~~~~~~~~~ 181 (479)
+++++..+.+++.++++.++++++|++.... ..+.+.... .+.+. ++....... .
T Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 171 (558)
T PRK12583 98 VNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPP------P 171 (558)
T ss_pred EecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCC------c
Confidence 9999999999999999999999999975321 122221111 11111 111111110 1
Q ss_pred ccccccccCCcCCCC---CCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccc
Q psy8225 182 STTLLDEELPEVSAK---SPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPL 258 (479)
Q Consensus 182 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl 258 (479)
....|++........ ..........++++++++|||||||.||+|.++|+++...+......+++..+|++++.+|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~ 251 (558)
T PRK12583 172 GFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPL 251 (558)
T ss_pred cccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEecCc
Confidence 112232222211110 00000123456789999999999999999999999999888877777889999999999999
Q ss_pred hhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCCh
Q psy8225 259 YHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRP 335 (479)
Q Consensus 259 ~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~ 335 (479)
+|.+|.+..++.++..|+++++.. .+++..+++.++++++|++.++|+++..++.........++++|.++ |+++++
T Consensus 252 ~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~ 331 (558)
T PRK12583 252 YHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPI 331 (558)
T ss_pred hhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCH
Confidence 999999888899999999998654 57899999999999999999999999888877655555678999866 899999
Q ss_pred hhHHHHHHHhCcceeeeeccccccCcccccCC------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccc
Q psy8225 336 QVWEPFQKRFGLDRICEFYGATEGNANLMNAD------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPC 409 (479)
Q Consensus 336 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~ 409 (479)
++.+++.+.++...+++.||+||++.+..... .+++++|+|.+ ++.+.++|++ ++ ++
T Consensus 332 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~------~~~~~i~d~~-~~----------~~ 394 (558)
T PRK12583 332 EVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQP------HLEVKVVDPD-GA----------TV 394 (558)
T ss_pred HHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCC------CCeEEEECCC-CC----------CC
Confidence 99999999998767999999999987654322 23456677655 7899999976 55 57
Q ss_pred cCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 410 KAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 410 ~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+.|+.|||+++ |+ .++.||++++..+.+.+. .++||+|||+|++|+||++++.||.||++
T Consensus 395 ~~g~~Gel~v~----g~-~~~~gy~~~~~~~~~~~~-----~~~~~~TGDl~~~~~dg~l~i~GR~~~~i 454 (558)
T PRK12583 395 PRGEIGELCTR----GY-SVMKGYWNNPEATAESID-----EDGWMHTGDLATMDEQGYVRIVGRSKDMI 454 (558)
T ss_pred CCCCeeEEEEE----eC-ccchhhcCChHHHHhhcC-----CCCCeeccceEEECCCccEEEEeccccee
Confidence 88999999998 67 899999999887766542 37899999999999999999999999974
No 66
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-52 Score=422.95 Aligned_cols=395 Identities=20% Similarity=0.296 Sum_probs=313.4
Q ss_pred cccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce
Q psy8225 44 TLPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 44 ~~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 119 (479)
..+.++.++|.+.++.+|+++|+.+. +|| ||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 4 ~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 83 (528)
T PRK07470 4 RRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAV 83 (528)
T ss_pred ccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeE
Confidence 35677899999999999999999887 999 99999999999999999999999999999999999999999999999
Q ss_pred eeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcc-eEEecCCCCCCCccCCCccccccccCCcCCCCCC
Q psy8225 120 AAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGI-SLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSP 198 (479)
Q Consensus 120 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (479)
++++++..+.+++.++++.++++.++++.+............+.. .++...... ....+++++........
T Consensus 84 ~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 155 (528)
T PRK07470 84 WVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGAR--------AGLDYEALVARHLGARV 155 (528)
T ss_pred EEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCc--------ccccHHHHHhcCCCCCC
Confidence 999999999999999999999999999987655554443322222 222222211 01223333222111111
Q ss_pred cccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhc--CCCCCCeEEEeccchhhhhhHHHHHHHHhcCc
Q psy8225 199 TEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQT--GLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGS 276 (479)
Q Consensus 199 ~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~ 276 (479)
. ......+++++++|||||||.||+|+++|+++...+....... +...+|+++..+|++|.+++. .++ .+..|+
T Consensus 156 ~--~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~-~~~~g~ 231 (528)
T PRK07470 156 A--NAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QLC-QVARGA 231 (528)
T ss_pred C--cccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-HHH-HHhcCc
Confidence 1 1334568899999999999999999999999876544322222 467789999999999998864 344 456666
Q ss_pred eEEecC--CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeee
Q psy8225 277 TVVIRS--KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICE 352 (479)
Q Consensus 277 ~~v~~~--~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~ 352 (479)
+.++.+ .+++..+++.|+++++|++.++|++++.+.+.+......++++|.++ |+++++++.+++.+.+|. .+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~-~~~~ 310 (528)
T PRK07470 232 ATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLGK-VLVQ 310 (528)
T ss_pred eEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhCc-HHHH
Confidence 666554 57899999999999999999999999999887765556678999877 888999999999999998 8999
Q ss_pred eccccccCcccccC-----------CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEe
Q psy8225 353 FYGATEGNANLMNA-----------DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMI 421 (479)
Q Consensus 353 ~YG~tE~~~~~~~~-----------~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~ 421 (479)
.||+||+++.+... ....+++|+|.+ +++++++|++ ++ +++.|+.|||+++
T Consensus 311 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~------g~~~~i~d~~-~~----------~~~~g~~Gel~i~- 372 (528)
T PRK07470 311 YFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERT------GMEVQIQDDE-GR----------ELPPGETGEICVI- 372 (528)
T ss_pred hCCCcccCCceeecchhhccccccccceeeccCcccC------CcEEEEECCC-CC----------CCCCCCceEEEEe-
Confidence 99999987655321 112355666554 7889888854 44 5688999999998
Q ss_pred ecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 422 KESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 422 ~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+ .++.||+++++.+.+.+. +|||+|||+|++|+||++++.||.||++
T Consensus 373 ---~~-~~~~gy~~~~~~~~~~~~------~~~~~TGDl~~~~~~g~l~~~GR~dd~i 420 (528)
T PRK07470 373 ---GP-AVFAGYYNNPEANAKAFR------DGWFRTGDLGHLDARGFLYITGRASDMY 420 (528)
T ss_pred ---CC-ccchhhcCCHHHHHhhhc------CCcEecceeEEEccCCeEEEeCCccceE
Confidence 77 899999999888776654 7899999999999999999999999974
No 67
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.9e-52 Score=431.25 Aligned_cols=390 Identities=19% Similarity=0.194 Sum_probs=298.9
Q ss_pred chhHHHHHHHhhcCCCccccEE------------EEeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY------------TVTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGL 113 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~------------~~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~ 113 (479)
.++.++++++++.+|+++|+++ .+|| ||.++++++|++|.+. +++||+|+++++|+++|++++|||
T Consensus 34 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~ 112 (612)
T PRK12476 34 TTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAA 112 (612)
T ss_pred CcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHH
Confidence 5688999999999999999985 2999 9999999999999987 999999999999999999999999
Q ss_pred hhcCceeeee-cCCcc--hHHHHHHHHhccceEEEeChhhHHHHHHhhccCCc---ceEEecCCCCCCCccCCCcccccc
Q psy8225 114 SKIGVVAAFI-NTNQR--QHILIHSIKVAECKAIIYGAELSEALTEVKDSIPG---ISLYAAGTRRKPQAKVLPSTTLLD 187 (479)
Q Consensus 114 ~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 187 (479)
+++|++++|+ ++.++ .+++.+++++++++++|++......+.+.....+. ..++..+...
T Consensus 113 ~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------- 178 (612)
T PRK12476 113 IKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIP-------------- 178 (612)
T ss_pred HHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEecccc--------------
Confidence 9999999999 57666 78999999999999999998766655444332221 1222222100
Q ss_pred ccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcC-CCCCCeEEEeccchhhhhhHH
Q psy8225 188 EELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTG-LTSDDVVYTTLPLYHTAGGLL 266 (479)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~~~~~pl~h~~g~~~ 266 (479)
........ .....++++++|+|||||||.||||+++|+++...+......++ +.+++++++.+|++|..|+..
T Consensus 179 ---~~~~~~~~---~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~ 252 (612)
T PRK12476 179 ---DSAGESFV---PVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSM 252 (612)
T ss_pred ---cccccccc---CCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHH
Confidence 00000000 02235688999999999999999999999999887776666666 688899999999999999865
Q ss_pred HHHHHHhcCceEEecC-CC--ChhHHHHHHH--HhcccEEEEehHHHHHHhcCCC----CCCCCCCceeEEE-ecCCChh
Q psy8225 267 GIGQCLLGGSTVVIRS-KF--SASNFWKDCI--KYNCTVAQYIGEMCRYLLAVPE----KPEDTQHSVKMMI-GNGLRPQ 336 (479)
Q Consensus 267 ~~~~~l~~G~~~v~~~-~~--~~~~~~~~i~--~~~~t~~~~~p~~l~~l~~~~~----~~~~~l~~lr~~~-G~~l~~~ 336 (479)
.+...+..|.++++.+ .+ ++..+++.++ +++++.+..+|+++..+..... ....+++++|++. |++++++
T Consensus 253 ~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr~~~gg~~~~~~ 332 (612)
T PRK12476 253 IGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVVLIIGSEPVSID 332 (612)
T ss_pred HHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHheEEecccCCCHH
Confidence 5555555555555543 23 8889999995 4899999999998887765421 1233578888333 8899999
Q ss_pred hHHHHHHHh---Cc--ceeeeeccccccCcccccC-CC-----------------------------CCCcccccCcccc
Q psy8225 337 VWEPFQKRF---GL--DRICEFYGATEGNANLMNA-DG-----------------------------KVGAVGYIPYIAI 381 (479)
Q Consensus 337 ~~~~~~~~~---~~--~~v~~~YG~tE~~~~~~~~-~~-----------------------------~~~~~g~~~~~~~ 381 (479)
+.++|.+.| |. ..+++.||+||++..+... +. ..+++|+|++
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~--- 409 (612)
T PRK12476 333 AVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVAR--- 409 (612)
T ss_pred HHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCC---
Confidence 999999988 43 2589999999987554321 10 1135566554
Q ss_pred CCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhc----c--------
Q psy8225 382 PFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVY----S-------- 449 (479)
Q Consensus 382 ~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~----~-------- 449 (479)
+++++++|+++++ +++.|+.|||+++ |+ +++.|||++++.+.+.|.+.. .
T Consensus 410 ---g~~v~ivd~~~g~----------~~~~g~~GEl~v~----g~-~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~ 471 (612)
T PRK12476 410 ---SQWAVIVDPDTGA----------ELPDGEVGEIWLH----GD-NIGRGYWGRPEETERTFGAKLQSRLAEGSHADGA 471 (612)
T ss_pred ---CCEEEEEeCCCCc----------CCCCCCEEEEEEc----CC-cccccccCChHHHHHHHhhhhccccccccccccc
Confidence 7999999977666 5689999999998 88 899999999888877664211 0
Q ss_pred -CCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 450 -HGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 450 -~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.+++||+|||+|++ +||+|+|+||+||++
T Consensus 472 ~~~~~w~~TGDlg~~-~dG~l~i~GR~~d~I 501 (612)
T PRK12476 472 ADDGTWLRTGDLGVY-LDGELYITGRIADLI 501 (612)
T ss_pred cCCCCeeecccccee-ECCEEEEEeccCcEE
Confidence 12469999999998 499999999999974
No 68
>KOG1180|consensus
Probab=100.00 E-value=3.6e-53 Score=393.64 Aligned_cols=409 Identities=19% Similarity=0.179 Sum_probs=322.3
Q ss_pred cchhHHHHHHHhhcCCCccccEEE--------------------------Eeh-hhHHHHHHHHHHHHHcCCCCCCE-EE
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT--------------------------VTF-QVEDHSNRIANFFKSKGLQRGDA-VA 97 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~--------------------------~Ty-~l~~~~~~la~~L~~~gi~~gd~-V~ 97 (479)
-.|+++++.+.++++.++.++.++ +|| |+..++.++|++|.+.|++++++ |+
T Consensus 40 ~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~ 119 (678)
T KOG1180|consen 40 ASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIA 119 (678)
T ss_pred cccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 367888888888888888888764 799 99999999999999999997766 99
Q ss_pred EEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCC---CC
Q psy8225 98 LFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTR---RK 174 (479)
Q Consensus 98 i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 174 (479)
|+.+.+.+|+++++||++.+..+|.++.++..+.+.|-|+.++++.|||+.+..+.+....+..+.++.++..+. ..
T Consensus 120 iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~d~id~~~ 199 (678)
T KOG1180|consen 120 IFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYFDPIDYDA 199 (678)
T ss_pred EEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEecCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999988888888887775443332 11
Q ss_pred CCc------cCCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhc-CCC
Q psy8225 175 PQA------KVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQT-GLT 247 (479)
Q Consensus 175 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~-~~~ 247 (479)
... +....+.+|+++++-+.....+. .++.++|+|+|||||||||.||||+++|.|+++.+....... .+.
T Consensus 200 ~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~--~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg 277 (678)
T KOG1180|consen 200 AKDDVNSIVRPDIKIISFDDVEKLGKENEIPP--HPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELG 277 (678)
T ss_pred chhhhhhhccCCeEEEEHHHHHhhCCcCCCCC--CCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccC
Confidence 111 12245677888887776664222 444789999999999999999999999999999888766544 688
Q ss_pred CCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCCh--------hHHHHHHHHhcccEEEEehHHHHHHhcCC----
Q psy8225 248 SDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSA--------SNFWKDCIKYNCTVAQYIGEMCRYLLAVP---- 315 (479)
Q Consensus 248 ~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~--------~~~~~~i~~~~~t~~~~~p~~l~~l~~~~---- 315 (479)
+.|++++.+|+.|++.+.+.+ .++..|+++=..+.... ..---.+..+++|++.++|.+++++.+..
T Consensus 278 ~~D~yi~yLPLAHIlEl~aE~-~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV 356 (678)
T KOG1180|consen 278 PKDRYIAYLPLAHILELTAEL-VCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKV 356 (678)
T ss_pred CCceEEEechHHHHHHHHHHH-HHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999987665 58888988876543211 11122356689999999999877632211
Q ss_pred ----------------------CCCCC----------------CCCceeEEE--ecCCChhhHHHHHHHhCcceeeeecc
Q psy8225 316 ----------------------EKPED----------------TQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYG 355 (479)
Q Consensus 316 ----------------------~~~~~----------------~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG 355 (479)
+.... .-..||.++ |+++++++.+.+.-.+.+ ++.++||
T Consensus 357 ~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~-Pv~qGYG 435 (678)
T KOG1180|consen 357 NAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCC-PVLQGYG 435 (678)
T ss_pred hhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccc-ccccccc
Confidence 00000 012788887 788999998888888888 9999999
Q ss_pred ccccCccccc---CCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccccc
Q psy8225 356 ATEGNANLMN---ADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNG 432 (479)
Q Consensus 356 ~tE~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~g 432 (479)
.||+++..+- .+...|.+|.|++ -++++.+|-+.+.....++ | ..|||+++ |+ ++..|
T Consensus 436 LTEtca~~tv~e~~d~~~g~vG~pl~------c~eiKLvdw~EgGY~~~~~------P--PrGEI~i~----G~-~vt~g 496 (678)
T KOG1180|consen 436 LTETCAAATVLEPEDFSTGRVGAPLP------CCEIKLVDWEEGGYFAKNK------P--PRGEILIG----GP-NVTMG 496 (678)
T ss_pred ccchhcccEecChhhcccccccCCcc------ceEEEEEEhhhcCccCCCC------C--CCceEEec----CC-ccChh
Confidence 9998755432 2345567777766 4889989887766543332 1 37999998 88 99999
Q ss_pred ccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 433 YADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 433 Y~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||++++.|++.|.. .+|.+||+|||+|++.+||.|.|.+|+||+|
T Consensus 497 Y~kn~ekT~e~ft~--~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLV 541 (678)
T KOG1180|consen 497 YYKNEEKTKEDFTV--EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLV 541 (678)
T ss_pred hhCChhhhhhhcee--cCCcEEEeccccceecCCCcEEEeechhhhh
Confidence 99999988877652 3344599999999999999999999999986
No 69
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.8e-52 Score=462.69 Aligned_cols=404 Identities=21% Similarity=0.248 Sum_probs=324.6
Q ss_pred chhHHHHHHHhhcCCCccccEEE----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
.++.+++.++++++|+++|+++. +|| ||.++++++|+.|++ ++++||+|+++++|+++++++++||+++|++++
T Consensus 615 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v 693 (1146)
T PRK08633 615 PPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGKVPV 693 (1146)
T ss_pred CCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCCEEE
Confidence 66899999999999999999873 999 999999999999987 489999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhc--cCC-cceEEecCCCCCCCccCCCccccccccCCcCCCCC-
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKD--SIP-GISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKS- 197 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 197 (479)
|+++..+.+++.++++++++++++++++..+.+.+... ..+ ..+++..++.... ......+.+.........
T Consensus 694 ~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 769 (1146)
T PRK08633 694 NLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAK----ISKVDKLTALLAARLLPAR 769 (1146)
T ss_pred EeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccc----cchhHHHHHHHHhccCCHH
Confidence 99999999999999999999999998876655432110 111 1223322221100 000111111111000000
Q ss_pred --CcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcC
Q psy8225 198 --PTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGG 275 (479)
Q Consensus 198 --~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G 275 (479)
.........++++++++|||||||.||+|+++|+++...+......++...+|++++.+|++|.+|+...++.++..|
T Consensus 770 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g 849 (1146)
T PRK08633 770 LLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEG 849 (1146)
T ss_pred HHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCC
Confidence 000013346789999999999999999999999999988888777888899999999999999999877778899999
Q ss_pred ceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeee
Q psy8225 276 STVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICE 352 (479)
Q Consensus 276 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~ 352 (479)
+++++.+ .+++..+++.++++++|++..+|++++.+.+........++++|.+. |+++++++.+++++.+|. ++++
T Consensus 850 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~-~~~~ 928 (1146)
T PRK08633 850 IKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKFGI-RILE 928 (1146)
T ss_pred CEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHhCC-Ceec
Confidence 9998866 57899999999999999999999999999887655556678999877 889999999999999998 9999
Q ss_pred eccccccCcccccC-C------------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEE
Q psy8225 353 FYGATEGNANLMNA-D------------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIG 419 (479)
Q Consensus 353 ~YG~tE~~~~~~~~-~------------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v 419 (479)
.||+||+++.+... + .+++++|+|.| +++++++|+++++ +|++|+.|||++
T Consensus 929 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~------~~~v~i~d~~~~~----------~~~~g~~Gel~v 992 (1146)
T PRK08633 929 GYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLP------GVAVRIVDPETFE----------ELPPGEDGLILI 992 (1146)
T ss_pred ccccccCcceEEEecCcccccccccccCCCCCCccccCC------CCEEEEEcCCCCc----------cCCCCCceEEEE
Confidence 99999988655321 1 23456666655 8999999988776 678999999999
Q ss_pred EeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 420 MIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 420 ~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+ |+ +++.||+++++.+++.+.+ .+++|||+|||+|++|+||++++.||.||++
T Consensus 993 ~----g~-~~~~gY~~~~~~t~~~~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i 1045 (1146)
T PRK08633 993 G----GP-QVMKGYLGDPEKTAEVIKD--IDGIGWYVTGDKGHLDEDGFLTITDRYSRFA 1045 (1146)
T ss_pred c----CC-CccccccCCccchHHHhhc--CCCCCeEECCCEEEEcCCceEEEEecccchh
Confidence 8 77 9999999998888777652 1345999999999999999999999999985
No 70
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-51 Score=421.07 Aligned_cols=394 Identities=21% Similarity=0.259 Sum_probs=319.4
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
+.+.+.+.++++.+|+++|+.+. +|| ||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 17 ~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~vp 96 (542)
T PRK07786 17 QNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIAVP 96 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEE
Confidence 34789999999999999999986 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCcCCCCCCccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTED 201 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (479)
+++..+.+++.++++.+++++++++......+.......+..+ ++...+.. ......+++++........
T Consensus 97 l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--- 167 (542)
T PRK07786 97 VNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSS------DDSVLGYEDLLAEAGPAHA--- 167 (542)
T ss_pred cCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCC------cccccCHHHHhhccCCCCC---
Confidence 9999999999999999999999998876655544433333333 22222111 0122334443332211111
Q ss_pred ccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCC-CCCCeEEEeccchhhhhhHHHHHHHHhcCceEEe
Q psy8225 202 IKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGL-TSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVI 280 (479)
Q Consensus 202 ~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~-~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~ 280 (479)
......+++++++|||||||.||+|.++|+++...+......+++ ..++++++..|++|.+|+ ..++.++..|+++++
T Consensus 168 ~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~ 246 (542)
T PRK07786 168 PVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGI-GSMLPGLLLGAPTVI 246 (542)
T ss_pred CCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHH-HHHHHHHHccCEEEE
Confidence 123445779999999999999999999999998888777666666 677899999999999887 667889999999998
Q ss_pred cC--CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 281 RS--KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 281 ~~--~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
.+ .+++..+++.++++++|.+.++|+++..|......... ..++|.++ |+++++++++++.+.++..++++.||+
T Consensus 247 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~-~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~ 325 (542)
T PRK07786 247 YPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPR-DLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQ 325 (542)
T ss_pred ccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCcc-CcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecc
Confidence 65 57999999999999999999999999999876544332 23688766 888999999999999954489999999
Q ss_pred cccCcccccCC-----CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccc
Q psy8225 357 TEGNANLMNAD-----GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFN 431 (479)
Q Consensus 357 tE~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~ 431 (479)
||++.+..... ..++++|+|++ ++.+.++|++ +. +++.|+.|||+++ |+ .++.
T Consensus 326 tE~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~~-~~----------~~~~g~~Gel~v~----g~-~~~~ 383 (542)
T PRK07786 326 TEMSPVTCMLLGEDAIRKLGSVGKVIP------TVAARVVDEN-MN----------DVPVGEVGEIVYR----AP-TLMS 383 (542)
T ss_pred cccccceEecCcccccccCCCccccCC------CceEEEECCC-CC----------CCcCCCceEEEEE----Ch-hhhh
Confidence 99986544221 24466777665 7889999854 44 5688999999998 77 8999
Q ss_pred cccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 432 GYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 432 gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||+++++.+...|. +|||+|||++++++||+++++||.||++
T Consensus 384 gy~~~~~~~~~~f~------~~~~~TGDl~~~~~~g~~~i~GR~~d~i 425 (542)
T PRK07786 384 GYWNNPEATAEAFA------GGWFHSGDLVRQDEEGYVWVVDRKKDMI 425 (542)
T ss_pred hhcCCHHHHHHHhh------CCcccccceEEEcCCceEEEEecccceE
Confidence 99999888877664 7899999999999999999999999974
No 71
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-51 Score=419.19 Aligned_cols=393 Identities=21% Similarity=0.275 Sum_probs=320.3
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.+.++.++|.++++++|+++|+++. +|| ||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 89 (524)
T PRK06188 10 SGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRR 89 (524)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEE
Confidence 4567999999999999999999987 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChh-hHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCcCCCCCC
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAE-LSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSP 198 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (479)
+|++|..+.+++.++++.++++.+++++. ......+.....+.+. ++....... ..++.........
T Consensus 90 v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 158 (524)
T PRK06188 90 TALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPD-----------GVDLLAAAAKFGP 158 (524)
T ss_pred EecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccc-----------hhhHHHhhhccCc
Confidence 99999999999999999999999999876 3333333333333222 222221110 0011100000000
Q ss_pred cccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceE
Q psy8225 199 TEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTV 278 (479)
Q Consensus 199 ~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~ 278 (479)
.........+++++++|||||||.||+|.++|.++...+......+++..++++++.+|++|.+|+. ++.++..|+++
T Consensus 159 ~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G~~~ 236 (524)
T PRK06188 159 APLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF--FLPTLLRGGTV 236 (524)
T ss_pred ccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH--HHHHHHcCCEE
Confidence 0001222445699999999999999999999999998888888888899999999999999998853 56778899999
Q ss_pred EecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 279 VIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 279 v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
++.+.+++..+++.++++++|++..+|+++..+++........++++|.++ |++++++..+.+.+.++. .+++.||+
T Consensus 237 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~-~~~~~YG~ 315 (524)
T PRK06188 237 IVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFGP-IFAQYYGQ 315 (524)
T ss_pred EEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhCc-hhhheeCc
Confidence 999999999999999999999999999999999988766666788999877 888999999999999998 89999999
Q ss_pred cccCcccccCC---------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcc
Q psy8225 357 TEGNANLMNAD---------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAE 427 (479)
Q Consensus 357 tE~~~~~~~~~---------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~ 427 (479)
||++..+.... ..++++|+|+| ++.+.++|++ +. +++.|+.|||+++ |+
T Consensus 316 tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~------g~~v~i~~~~-~~----------~~~~g~~Gel~v~----~~- 373 (524)
T PRK06188 316 TEAPMVITYLRKRDHDPDDPKRLTSCGRPTP------GLRVALLDED-GR----------EVAQGEVGEICVR----GP- 373 (524)
T ss_pred cccCCceeecCchhccccccccCCccccccC------CcEEEEEcCC-CC----------CCCCCCeeEEEEE----Cc-
Confidence 99975554321 23455666655 7889988865 54 5688999999998 77
Q ss_pred cccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 428 SHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 428 ~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.++.||++++..+...+. +|||+|||+|++|+||++++.||.||++
T Consensus 374 ~~~~gy~~~~~~~~~~~~------~g~~~TGDl~~~~~~g~~~~~GR~~~~i 419 (524)
T PRK06188 374 LVMDGYWNRPEETAEAFR------DGWLHTGDVAREDEDGFYYIVDRKKDMI 419 (524)
T ss_pred chhhhhcCChHHhhhhhc------CCceeecceEEEcCCccEEEEeccccce
Confidence 899999999877766553 7899999999999999999999999974
No 72
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-51 Score=428.87 Aligned_cols=394 Identities=15% Similarity=0.167 Sum_probs=299.4
Q ss_pred cCCCccccEEE--------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcch
Q psy8225 59 EVPMTGAYKYT--------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQ 129 (479)
Q Consensus 59 ~~p~~~a~~~~--------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~ 129 (479)
.+|+++|+++. +|| ||.+++.++|+.|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.
T Consensus 96 ~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~ 175 (655)
T PRK03584 96 RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGV 175 (655)
T ss_pred CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCH
Confidence 57999999974 999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccceEEEeChhh---------HHHHHHhhccCCcce-EEecCCCCC-CCccCCCccccccccCCcCCCCCC
Q psy8225 130 HILIHSIKVAECKAIIYGAEL---------SEALTEVKDSIPGIS-LYAAGTRRK-PQAKVLPSTTLLDEELPEVSAKSP 198 (479)
Q Consensus 130 ~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 198 (479)
+++.++++.++++++|+++.. .+.+.++....+.+. ++++..... ...........|++++........
T Consensus 176 ~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (655)
T PRK03584 176 QGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPGALLWEDFLAPAEAAEL 255 (655)
T ss_pred HHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCCcccHHHHhhccccCCC
Confidence 999999999999999997642 233333434444332 232221110 000001122334444331111111
Q ss_pred cccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHH-HhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCce
Q psy8225 199 TEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMF-MAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGST 277 (479)
Q Consensus 199 ~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~ 277 (479)
. ......+++++|+|||||||.||||+++|++++. ........+++.++|++++..++.|..+ ..++.++..|++
T Consensus 256 ~--~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~L~~G~t 331 (655)
T PRK03584 256 E--FEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMW--NWLVSGLLVGAT 331 (655)
T ss_pred C--ceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhH--HHHHHHHHcCCE
Confidence 1 1334678999999999999999999999998764 3455556678899999999999988754 235678999999
Q ss_pred EEecCC----CChhHHHHHHHHhcccEEEEehHHHHHHhcCCC--CCCCCCCceeEEE--ecCCChhhHHHHHHHhC-cc
Q psy8225 278 VVIRSK----FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPE--KPEDTQHSVKMMI--GNGLRPQVWEPFQKRFG-LD 348 (479)
Q Consensus 278 ~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~--~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~-~~ 348 (479)
+++.+. +++..+++.++++++|++.++|++++.+.+... ....++++||.++ |+++++++.+++.+.++ ..
T Consensus 332 ~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~ 411 (655)
T PRK03584 332 LVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADV 411 (655)
T ss_pred EEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCc
Confidence 998752 478999999999999999999999998876532 2234678999877 89999999999999984 23
Q ss_pred eeeeeccccccCcccc-c---CCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecC
Q psy8225 349 RICEFYGATEGNANLM-N---ADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKES 424 (479)
Q Consensus 349 ~v~~~YG~tE~~~~~~-~---~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~ 424 (479)
.+++.||+||+++... . .+..++++|.|.+ +++++++|++ |+ ++ .|+.|||+++
T Consensus 412 ~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~------g~~~~ivd~~-g~----------~~-~g~~GeL~v~---- 469 (655)
T PRK03584 412 WLASISGGTDICSCFVGGNPLLPVYRGEIQCRGL------GMAVEAWDED-GR----------PV-VGEVGELVCT---- 469 (655)
T ss_pred eEEeccChHhhhcccccCCCCCCcCCCccCCCcC------CceeEEECCC-CC----------CC-CCCceEEEEc----
Confidence 8999999999864432 2 1334567777655 7899999955 44 44 6889999998
Q ss_pred Cc-ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 425 RA-ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 425 ~~-~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+| ++++.|||++++.++ ....+|...+|||+|||+|++|+||+|+|+||.||++
T Consensus 470 gp~p~~~~gy~~~~~~~~-~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~I 524 (655)
T PRK03584 470 KPFPSMPLGFWNDPDGSR-YRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATL 524 (655)
T ss_pred cCCCCCcceeeCCCccch-HHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCee
Confidence 54 278999999876432 2222333346799999999999999999999999984
No 73
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-51 Score=420.64 Aligned_cols=403 Identities=19% Similarity=0.245 Sum_probs=310.9
Q ss_pred cchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
..++.++|.+.++.+|+++|++.. +|| ||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 9 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v 88 (540)
T PRK06164 9 ADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVI 88 (540)
T ss_pred CCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEE
Confidence 356899999999999999999976 999 9999999999999999999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhH-----HHHHHhhcc-CCcce-EEecCCCCCCCccCCCccccccccCCcCC
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELS-----EALTEVKDS-IPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVS 194 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (479)
|+++..+.+++.++++.++++++|++.+.. ..+...... .+.++ ++..+.... .... .....+.+......
T Consensus 89 ~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~ 166 (540)
T PRK06164 89 AVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAAD-ATPA-PAPGARVQLFALPD 166 (540)
T ss_pred ecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcc-cCCC-CCcccccccccccc
Confidence 999999999999999999999999976542 122221111 11222 222221100 0000 00000111111100
Q ss_pred CCCC-cccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHh
Q psy8225 195 AKSP-TEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLL 273 (479)
Q Consensus 195 ~~~~-~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~ 273 (479)
.... .........+++++++|||||||.||+|+++|+++...+......+++..++++++.+|++|.+|+ ..++.++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~ 245 (540)
T PRK06164 167 PAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGF-STLLGALA 245 (540)
T ss_pred cCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHH-HHHHHHHh
Confidence 0000 000122346788999999999999999999999999888888888888999999999999999997 56788999
Q ss_pred cCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--e-cCCChhhHHHHHHHhCccee
Q psy8225 274 GGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--G-NGLRPQVWEPFQKRFGLDRI 350 (479)
Q Consensus 274 ~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G-~~l~~~~~~~~~~~~~~~~v 350 (479)
.|+++++.+.+++..+++.|+++++|+++.+|+++..|.+.. .....++++|.+. | .+...++.+++.+. +. ++
T Consensus 246 ~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 322 (540)
T PRK06164 246 GGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR-GV-PL 322 (540)
T ss_pred cCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc-CC-ce
Confidence 999999999899999999999999999999999999998872 2334678888775 2 34556666666654 77 89
Q ss_pred eeeccccccCcccccCCC------CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecC
Q psy8225 351 CEFYGATEGNANLMNADG------KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKES 424 (479)
Q Consensus 351 ~~~YG~tE~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~ 424 (479)
++.||+||++..+..... ...+.|.+. .+++.++++|++++. +++.|+.|||+++
T Consensus 323 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~i~d~~~~~----------~~~~g~~Gel~v~---- 383 (540)
T PRK06164 323 TGLYGSSEVQALVALQPATDPVSVRIEGGGRPA-----SPEARVRARDPQDGA----------LLPDGESGEIEIR---- 383 (540)
T ss_pred ecceeeccccceeeccCCCCCCcceeccCcccc-----CCCeEEEEecCCCCc----------CCCCCCeeEEEEe----
Confidence 999999999866543221 122334432 136888899988776 5688999999998
Q ss_pred CcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 425 RAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 425 ~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+ +++.||+++++.+.+.+. .+|||+|||+|++|+||++++.||.||++
T Consensus 384 g~-~~~~gY~~~~~~t~~~~~-----~~~~~~TGDl~~~~~~g~l~~~GR~~~~i 432 (540)
T PRK06164 384 AP-SLMRGYLDNPDATARALT-----DDGYFRTGDLGYTRGDGQFVYQTRMGDSL 432 (540)
T ss_pred cc-cccccccCCchhhhhccc-----CCCceecCCeEEEcCCceEEEEeecCCeE
Confidence 77 899999999888776654 27899999999999999999999999974
No 74
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-51 Score=422.51 Aligned_cols=403 Identities=22% Similarity=0.257 Sum_probs=311.0
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSK-GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~-gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
.++.++|.+++.++|+++|+++. +|| ||.++++++|+.|.+. |+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 103 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 46889999999999999999876 999 9999999999999985 999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCC-CCC------------------ccCCCc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRR-KPQ------------------AKVLPS 182 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------~~~~~~ 182 (479)
++++..+.+++.++++.++++++++++.....+..+........++...... ... ......
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHLPQ 183 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCCcc
Confidence 9999999999999999999999999875544333322211100111100000 000 000001
Q ss_pred cccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcC---------CCC-CCeE
Q psy8225 183 TTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTG---------LTS-DDVV 252 (479)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~---------~~~-~d~~ 252 (479)
...+++.+......... ......+++++|+|||||||.||+|+++|+++...+......+. ... ++++
T Consensus 184 ~~~~~~~~~~~~~~~~~--~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (562)
T PRK12492 184 AVPFKQALRQGRGLSLK--PVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVM 261 (562)
T ss_pred cccHHHHHhccCCCCCC--CCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEE
Confidence 11222222211111100 12345678999999999999999999999999776655443332 222 3577
Q ss_pred EEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--
Q psy8225 253 YTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI-- 329 (479)
Q Consensus 253 ~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~-- 329 (479)
++.+|++|.+|+...++..+..|...++.. .+++..+++.++++++|++..+|+++..|.+........++++|.++
T Consensus 262 ~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~g 341 (562)
T PRK12492 262 IAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSG 341 (562)
T ss_pred EEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEec
Confidence 899999999998777777778888766553 56889999999999999999999999999887765555678899877
Q ss_pred ecCCChhhHHHHHHHhCcceeeeeccccccCcccccCC----CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCc
Q psy8225 330 GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNAD----GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGL 405 (479)
Q Consensus 330 G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~ 405 (479)
|+++++++.++|.+.++. ++++.||+||++..+.... ..++++|+|++ +++++++|++ +.
T Consensus 342 G~~~~~~~~~~~~~~~~~-~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~------~~~v~ivd~~-~~-------- 405 (562)
T PRK12492 342 GTALVKATAERWEQLTGC-TIVEGYGLTETSPVASTNPYGELARLGTVGIPVP------GTALKVIDDD-GN-------- 405 (562)
T ss_pred cccCCHHHHHHHHHHhCC-ceeeccCccccCceeeecCCcccccCCccceecC------CCEEEEECCC-CC--------
Confidence 889999999999999998 9999999999986654322 23467777665 7899999964 44
Q ss_pred cccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 406 CIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 406 ~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++++|+.|||+++ |+ .++.|||++++.+.+.|+ ++|||+|||+|++|++|+++|.||.||++
T Consensus 406 --~~~~g~~Gel~v~----g~-~~~~gY~~~~~~t~~~~~-----~~g~~~TGD~g~~~~~G~l~i~GR~~~~i 467 (562)
T PRK12492 406 --ELPLGERGELCIK----GP-QVMKGYWQQPEATAEALD-----AEGWFKTGDIAVIDPDGFVRIVDRKKDLI 467 (562)
T ss_pred --CCCCCCceEEEEe----CC-ccccccccCchhhhhccc-----CCCceecCcEEEECCCCeEEEecccCCeE
Confidence 5688999999998 77 899999999887776553 37899999999999999999999999974
No 75
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.6e-51 Score=419.83 Aligned_cols=393 Identities=17% Similarity=0.200 Sum_probs=313.4
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|+++++ |+++|+++. +|| ||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|+++++
T Consensus 25 ~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~ 102 (536)
T PRK10946 25 LPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVN 102 (536)
T ss_pred ccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEec
Confidence 357899999887 999999988 999 99999999999999999999999999999999999999999999998877
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhH-----HHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCC
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELS-----EALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKS 197 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (479)
+.+.....++.++++.+++++++++.... .....+....+.++.+...... ....+.+.+.......
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 174 (536)
T PRK10946 103 ALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDD--------GEHSLDDAINHPAEDF 174 (536)
T ss_pred CCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCC--------CCccHHHHhhCccccc
Confidence 77777788899999999999999975421 1222233333444443332211 1112222222221111
Q ss_pred CcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHH-HHHHHHhcCc
Q psy8225 198 PTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLL-GIGQCLLGGS 276 (479)
Q Consensus 198 ~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~-~~~~~l~~G~ 276 (479)
. .....++++++++|||||||.||+|+++|+++...+......+++..++++++.+|++|.+++.. .++.++..|+
T Consensus 175 ~---~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~ 251 (536)
T PRK10946 175 T---ATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGG 251 (536)
T ss_pred c---cCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCc
Confidence 1 12345788999999999999999999999999998888777888999999999999999988654 5677899999
Q ss_pred eEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCC--CCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeee
Q psy8225 277 TVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVP--EKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICE 352 (479)
Q Consensus 277 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~ 352 (479)
++++.+.+++..+++.++++++|++..+|.++..|++.. ......++++|.++ |+++++++.+.+.+.++. ++++
T Consensus 252 ~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g~-~~~~ 330 (536)
T PRK10946 252 TVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAELGC-QLQQ 330 (536)
T ss_pred EEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhcCC-eEEE
Confidence 999988899999999999999999999999999988763 22233467888877 888999999999999998 9999
Q ss_pred eccccccCcccccCC----CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccc
Q psy8225 353 FYGATEGNANLMNAD----GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAES 428 (479)
Q Consensus 353 ~YG~tE~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~ 428 (479)
.||+||++....... ...+++|.|++ +++.++++|++ ++ +++.|+.|||+++ |+ .
T Consensus 331 ~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~-----~~~~v~i~d~~-~~----------~~~~g~~Gel~v~----g~-~ 389 (536)
T PRK10946 331 VFGMAEGLVNYTRLDDSDERIFTTQGRPMS-----PDDEVWVADAD-GN----------PLPQGEVGRLMTR----GP-Y 389 (536)
T ss_pred eecccccceeeecCCCccccccccCCcccC-----CCceEEEECCC-CC----------CCCCCCccEEEEe----cC-c
Confidence 999999764433221 23466777552 15778888844 44 5689999999998 77 8
Q ss_pred ccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 429 HFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 429 ~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++.||+++++.+.+.++ .+|||+|||+|++|+||++++.||.||++
T Consensus 390 ~~~GY~~~~~~t~~~~~-----~d~~~~TGDl~~~d~~G~l~~~gR~~d~i 435 (536)
T PRK10946 390 TFRGYYKSPQHNASAFD-----ANGFYCSGDLVSIDPDGYITVVGREKDQI 435 (536)
T ss_pred cchhhcCCcccchhhcc-----cCCceecCceEEECCCCcEEEecccccee
Confidence 99999999877776554 37899999999999999999999999975
No 76
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2.1e-51 Score=426.41 Aligned_cols=394 Identities=14% Similarity=0.163 Sum_probs=293.7
Q ss_pred cCCCccccEEE--------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcch
Q psy8225 59 EVPMTGAYKYT--------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQ 129 (479)
Q Consensus 59 ~~p~~~a~~~~--------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~ 129 (479)
..++++|+++. +|| ||.+++.++|+.|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.
T Consensus 96 ~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~ 175 (652)
T TIGR01217 96 AAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGA 175 (652)
T ss_pred cCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCH
Confidence 35788998884 999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccceEEEeChhh---------HHHHHHhhccCCcce-EEecCCCCCC--CccCCCccccccccCCcCCCCC
Q psy8225 130 HILIHSIKVAECKAIIYGAEL---------SEALTEVKDSIPGIS-LYAAGTRRKP--QAKVLPSTTLLDEELPEVSAKS 197 (479)
Q Consensus 130 ~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 197 (479)
+++.+++++++++++|+++.. .+.+.++....+.++ ++++...... ..........+++++.......
T Consensus 176 ~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (652)
T TIGR01217 176 RGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDGALDLEDFTAAAQAAE 255 (652)
T ss_pred HHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccCcccHHHHHhcccCCC
Confidence 999999999999999997643 344444444444333 2222211000 0000011223444433211111
Q ss_pred CcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHH-HhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCc
Q psy8225 198 PTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMF-MAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGS 276 (479)
Q Consensus 198 ~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~ 276 (479)
.. ......+++++|+|||||||.||||+++|.+++. ........+++.++|++++..|++|..+ ..++.++..|+
T Consensus 256 ~~--~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~l~~G~ 331 (652)
T TIGR01217 256 LV--FEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW--NWLVSGLATGA 331 (652)
T ss_pred CC--ceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh--HHHHHHHhcCc
Confidence 11 1234568999999999999999999999998654 4444455678899999999999999753 23457899999
Q ss_pred eEEecCC----CChhHHHHHHHHhcccEEEEehHHHHHHhcCCC--CCCCCCCceeEEE--ecCCChhhHHHHHHHhCc-
Q psy8225 277 TVVIRSK----FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPE--KPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGL- 347 (479)
Q Consensus 277 ~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~--~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~- 347 (479)
++++.+. .++..+++.++++++|++..+|.+++.+.+... ....++++||.++ |+++++++.+++.+.++.
T Consensus 332 t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~ 411 (652)
T TIGR01217 332 TLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKAD 411 (652)
T ss_pred EEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHHHHHhCCC
Confidence 9998752 378899999999999999888888877765421 2334688999887 899999999999998864
Q ss_pred ceeeeeccccccCcccc-cCC---CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeec
Q psy8225 348 DRICEFYGATEGNANLM-NAD---GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKE 423 (479)
Q Consensus 348 ~~v~~~YG~tE~~~~~~-~~~---~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~ 423 (479)
..+.+.||+||+++... ..+ ..++++|.|.+ +++++++|++ |+ ++ +|+.|||+++
T Consensus 412 ~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~------g~~v~ivd~~-g~----------~~-~g~~GEl~v~--- 470 (652)
T TIGR01217 412 VWLASISGGTDICSCFAGANPTLPVHIGEIQAPGL------GTAVQSWDPE-GK----------PV-TGEVGELVCT--- 470 (652)
T ss_pred ceEEeccCHHHHhccccCCCCCCCCcCCccCCCcC------CCceEEECCC-CC----------CC-CCCccEEEEe---
Confidence 25678999999753332 222 23456666544 7889999854 44 34 4889999998
Q ss_pred CCc-ccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 424 SRA-ESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 424 ~~~-~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+| ++++.|||++++.++ ....+|...+|||+|||+|++|+||+|+|+||.||++
T Consensus 471 -gp~p~~~~gy~~~~~~t~-~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I 525 (652)
T TIGR01217 471 -NPMPSMPIRFWNDPDGSK-YRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTL 525 (652)
T ss_pred -cCCCccccceeCCCccch-hHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeE
Confidence 54 268999999886543 1122333347899999999999999999999999974
No 77
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.5e-51 Score=418.82 Aligned_cols=405 Identities=20% Similarity=0.234 Sum_probs=313.5
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.+.++.++|.++++++|+++|+++. +|| ||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 21 ~~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~ 100 (557)
T PRK07059 21 QYPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVV 100 (557)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEE
Confidence 3467999999999999999999987 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCC------------------ccCCCc
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQ------------------AKVLPS 182 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~ 182 (479)
+|++|..+.+++.++++.++++++|++......+.+.....+...+++........ .-....
T Consensus 101 v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (557)
T PRK07059 101 VNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLPG 180 (557)
T ss_pred eccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccccccccccccccccccccCCCC
Confidence 99999999999999999999999999887665555543332211122111000000 000001
Q ss_pred cccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhc----CC---CCCCeEEEe
Q psy8225 183 TTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQT----GL---TSDDVVYTT 255 (479)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~----~~---~~~d~~~~~ 255 (479)
...+++.+......... .....++++++++|||||||.||+|+++|.+++.++......+ .. .....+++.
T Consensus 181 ~~~~~~~~~~~~~~~~~--~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (557)
T PRK07059 181 HVRFNDALAEGARQTFK--PVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCA 258 (557)
T ss_pred cccHHHHhhccCCCCCC--CCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEe
Confidence 11122222211111111 1334678899999999999999999999999986654332211 11 123567889
Q ss_pred ccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecC
Q psy8225 256 LPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNG 332 (479)
Q Consensus 256 ~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~ 332 (479)
+|++|.+++....+.++..|++.++.+ ..++..+++.++++++|.+.++|+++..+.+........++++|.++ |++
T Consensus 259 ~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg~~ 338 (557)
T PRK07059 259 LPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGGMA 338 (557)
T ss_pred CCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEecccc
Confidence 999999987666677778888766655 45888999999999999999999999999887665555677888876 677
Q ss_pred CChhhHHHHHHHhCcceeeeeccccccCcccccCC----CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcccc
Q psy8225 333 LRPQVWEPFQKRFGLDRICEFYGATEGNANLMNAD----GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIP 408 (479)
Q Consensus 333 l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~ 408 (479)
+++.+.++|.+.++. ++++.||+||++.++.... ..++++|.|++ +++++++|++ ++ +
T Consensus 339 ~~~~~~~~~~~~~~~-~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~------g~~v~i~d~~-~~----------~ 400 (557)
T PRK07059 339 VQRPVAERWLEMTGC-PITEGYGLSETSPVATCNPVDATEFSGTIGLPLP------STEVSIRDDD-GN----------D 400 (557)
T ss_pred CCHHHHHHHHHHhCC-CeeeccccccccchhhcCCCCCCCcCCcccCccC------CcEEEEECCC-CC----------C
Confidence 999999999999998 8999999999987654322 23456777655 7899988854 44 5
Q ss_pred ccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 409 CKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 409 ~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++.|+.|||+++ |+ .++.||+++++.+.+.+. .+|||+|||+|++++||++++.||+||++
T Consensus 401 ~~~g~~Gel~v~----g~-~~~~gY~~~~~~~~~~~~-----~~g~~~TGDl~~~~~~g~~~~~GR~~~~i 461 (557)
T PRK07059 401 LPLGEPGEICIR----GP-QVMAGYWNRPDETAKVMT-----ADGFFRTGDVGVMDERGYTKIVDRKKDMI 461 (557)
T ss_pred CCCCCceEEEEe----CC-ccchhhhcCHHHHhhhcc-----cCCceecCcEEEEcCCCcEEEecccccce
Confidence 688999999998 77 899999999887776543 27999999999999999999999999974
No 78
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.7e-51 Score=438.28 Aligned_cols=411 Identities=22% Similarity=0.332 Sum_probs=310.6
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
...++.++|.++++++|+++|+++. +|| ||.++++++|++|.++|+++||+|+|+++|+++++++++||+++|+++
T Consensus 445 ~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~ 524 (994)
T PRK07868 445 TRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVA 524 (994)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEE
Confidence 3366899999999999999999986 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCC--ccccccccCCcCCCCCC
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLP--STTLLDEELPEVSAKSP 198 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 198 (479)
+|++|. +++.++++.+++++||++.+....+... ..++++++........... ....+++..........
T Consensus 525 vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~-----~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (994)
T PRK07868 525 VLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL-----PGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVELPG 596 (994)
T ss_pred EEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc-----CceEEEecCCccccccCCcchhhhhhhhcCcccccCCc
Confidence 999985 6899999999999999987665544321 1234443321100000000 01111111111000000
Q ss_pred cccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceE
Q psy8225 199 TEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTV 278 (479)
Q Consensus 199 ~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~ 278 (479)
........++++++|+|| ||||.||++.++|.+...........+++..+|++++.+|++|.+|+...++.++..|+++
T Consensus 597 ~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~v 675 (994)
T PRK07868 597 WYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRI 675 (994)
T ss_pred ccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEE
Confidence 000011235789999998 6888888888888776555555555677889999999999999999876677778888888
Q ss_pred EecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEEecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 279 VIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMIGNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 279 v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
++.+.+++..+++.|+++++|++.++|++++.|++........++++|.++|+++++++.+++.+.++..++++.||+||
T Consensus 676 vl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~g~gl~~~l~~~~~~~~~~~~l~~~YG~TE 755 (994)
T PRK07868 676 ALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFIGSGMPTGLWERVVEAFAPAHVVEFFATTD 755 (994)
T ss_pred EecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEecCCCCHHHHHHHHHHhCchheeeeeeccc
Confidence 88888999999999999999999999999999988755444457799988888899999999999998448999999999
Q ss_pred cCcccccC-CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcc
Q psy8225 359 GNANLMNA-DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKK 437 (479)
Q Consensus 359 ~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~ 437 (479)
++..+... ..+++++|+|+| +...+++..+|+++++.+.|++|...+++.|+.|||+++ ++ . |++.+
T Consensus 756 ~~~~~~~~~~~~~~svG~p~p---g~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~----~~-~----~~~p~ 823 (994)
T PRK07868 756 GQAVLANVSGAKIGSKGRPLP---GAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLAR----AR-G----PIDPT 823 (994)
T ss_pred ccccccccCCCCCcccCCccC---CCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEe----cC-C----CCChh
Confidence 87554432 245678888766 111134444577888888888886667899999999988 44 2 44432
Q ss_pred hhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 438 ASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 438 ~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.+ .+..+|.+++|||+|||+|++|+||+|+|+||+||++
T Consensus 824 ~t---~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~I 862 (994)
T PRK07868 824 AS---VKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVI 862 (994)
T ss_pred hh---hHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEE
Confidence 21 2222344468999999999999999999999999985
No 79
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=6.6e-51 Score=413.24 Aligned_cols=394 Identities=21% Similarity=0.298 Sum_probs=318.7
Q ss_pred chhHHHHHHH-hhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 47 TYARPLFVRT-IREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 47 ~~l~~~l~~~-~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
++..++++++ ++.+|+++|++.. +|| ||.++++++|+.|.+.|+++|++|+++++|+++|+++++||+++|++++
T Consensus 4 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v 83 (508)
T TIGR02262 4 NAAEDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPV 83 (508)
T ss_pred hHHHHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEe
Confidence 4567888887 6779999999887 999 9999999999999999999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCcCCCCCCcc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTE 200 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (479)
|+++..+.+++.++++.+++++++++......+.+.....+... ++..+.... ....+.+..........
T Consensus 84 ~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-- 154 (508)
T TIGR02262 84 ALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEA-------GEVQLAELLATESEQFK-- 154 (508)
T ss_pred eccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCc-------ccccHHHHhhcCCCccC--
Confidence 99999999999999999999999999877766666555444333 222222110 11122222211111111
Q ss_pred cccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhh-hhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEE
Q psy8225 201 DIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAIS-GRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVV 279 (479)
Q Consensus 201 ~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v 279 (479)
.....++++++++|||||||.||+|+++|+++...+.. ....++++.+|++++.+|++|.+++...+..++..|++++
T Consensus 155 -~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~ 233 (508)
T TIGR02262 155 -PAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTV 233 (508)
T ss_pred -CCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEE
Confidence 12345688999999999999999999999999876654 3456678999999999999999998777778899999988
Q ss_pred ecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 280 IRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 280 ~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
+.+ .+++..+++.|.++++|.+.++|+++..+.+..........++|.++ |+++++++.+.|.+.++. ++++.||+
T Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~-~v~~~YG~ 312 (508)
T TIGR02262 234 LMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFGV-DIVDGIGS 312 (508)
T ss_pred EeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhCC-chhhCccc
Confidence 866 46899999999999999999999999888776544334567888766 889999999999999998 99999999
Q ss_pred cccCcccccC---CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccc
Q psy8225 357 TEGNANLMNA---DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGY 433 (479)
Q Consensus 357 tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY 433 (479)
||++.+.... +...+++|+|++ ++.++++| +++. ++++|+.|||+++ |+ .++.||
T Consensus 313 tE~~~~~~~~~~~~~~~~~~G~~~~------g~~v~i~d-~~~~----------~~~~g~~Gel~i~----~~-~~~~gY 370 (508)
T TIGR02262 313 TEMLHIFLSNLPGDVRYGTSGKPVP------GYRLRLVG-DGGQ----------DVAAGEPGELLIS----GP-SSATMY 370 (508)
T ss_pred cccCceeecCCccCCCCCCcCCCCC------CcEEEEEC-CCCC----------CCCCCCeeEEEEe----cC-cccccc
Confidence 9998654422 223456676554 78888888 4455 5688999999998 77 899999
Q ss_pred cCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 434 ADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++++.+...+. ++||+|||++++++||.+++.||.||++
T Consensus 371 ~~~~~~~~~~~~------~~~~~TGD~~~~~~~g~~~~~gR~~d~i 410 (508)
T TIGR02262 371 WNNRAKTRDTFQ------GEWTRSGDKYVRNDDGSYTYAGRTDDML 410 (508)
T ss_pred CCCHHHhHhhhh------cCceeccceEEEcCCccEEEecccccee
Confidence 999887776654 7899999999999999999999999974
No 80
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.5e-51 Score=416.83 Aligned_cols=400 Identities=18% Similarity=0.220 Sum_probs=311.5
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE-------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT-------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKI 116 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~-------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~ 116 (479)
.|.++.++|+..++.+|+..++.+. +|| ||.++++++|++|.+.|+++||+|+++++|+++++++++||+++
T Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 8 MPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 5677999999999999999888742 899 99999999999999999999999999999999999999999999
Q ss_pred CceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEe-cCCCCCCCccCCCccccccccCCcCCC
Q psy8225 117 GVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYA-AGTRRKPQAKVLPSTTLLDEELPEVSA 195 (479)
Q Consensus 117 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (479)
|++++|++|.++.+++.++++.+++++++++.+..+.+.++....+.++.+. .......... ......++++......
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 166 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAG-STPLLCYETLVGAQDG 166 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccC-CcccccHHHHhcccCC
Confidence 9999999999999999999999999999999877766655544444443322 2211110000 0112334443322111
Q ss_pred CCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHh--hhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHh
Q psy8225 196 KSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMA--ISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLL 273 (479)
Q Consensus 196 ~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~--~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~ 273 (479)
... .....++++++++|||||||.||+|++||++++... ......+++..+|++++.+|++|.+++. .++.++.
T Consensus 167 ~~~---~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~-~~~~~l~ 242 (539)
T PRK07008 167 DYD---WPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWG-LPYSAPL 242 (539)
T ss_pred CcC---cccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHH-HHHHHHh
Confidence 111 123456789999999999999999999999986432 2333466788899999999999988753 3456788
Q ss_pred cCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCccee
Q psy8225 274 GGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRI 350 (479)
Q Consensus 274 ~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v 350 (479)
.|+++++.+ .+++..+++.++++++|++.++|+++..+.+........++++|.++ |+++++++.+++.+.++. .+
T Consensus 243 ~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~-~l 321 (539)
T PRK07008 243 TGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEYGV-EV 321 (539)
T ss_pred cCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHhCC-ce
Confidence 999998864 67899999999999999999999999999887666556678899876 889999999999999998 99
Q ss_pred eeeccccccCcccccCC--------------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCce
Q psy8225 351 CEFYGATEGNANLMNAD--------------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGI 416 (479)
Q Consensus 351 ~~~YG~tE~~~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Ge 416 (479)
++.||+||++..+.... ....++|+|+| +++++++|++ +..+ +...++.||
T Consensus 322 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~p------g~~~~i~d~~-~~~~--------~~~~~~~Ge 386 (539)
T PRK07008 322 IHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIY------GVDMKIVGDD-GREL--------PWDGKAFGD 386 (539)
T ss_pred ecccccccccccceecccccccccCCchhhhhhcccCCcccc------ceEEEEECCC-CCcc--------CCCCCcceE
Confidence 99999999986543211 01234565554 7999999864 4422 222336799
Q ss_pred EEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 417 LIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 417 l~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+++ |+ .++.||++++.. . +. +|||+|||+|++|+||++++.||.||++
T Consensus 387 i~v~----g~-~~~~gy~~~~~~---~----~~--~g~~~TGD~~~~~~dg~l~~~GR~~d~i 435 (539)
T PRK07008 387 LQVR----GP-WVIDRYFRGDAS---P----LV--DGWFPTGDVATIDADGFMQITDRSKDVI 435 (539)
T ss_pred EEEe----CC-ccchhhcCChhh---h----hc--CCCcccCceEEEcCCCcEEEeecccCEE
Confidence 9998 77 899999998732 1 11 6899999999999999999999999974
No 81
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.1e-50 Score=414.54 Aligned_cols=404 Identities=19% Similarity=0.220 Sum_probs=310.2
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.+.++.++|+++++.+|+++|+.+. +|| ||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 3567999999999999999999886 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhh--HHHHHHhhccCCcceEEecCCCCCCCc-------cCCCccccccccCC
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAEL--SEALTEVKDSIPGISLYAAGTRRKPQA-------KVLPSTTLLDEELP 191 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 191 (479)
+|++|..+.+++.++++.++++++|++... ...+.+........++++......... ........+++++.
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 999999999999999999999999997531 122222111111112222221110000 00011222333332
Q ss_pred cCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh-----hcCCCCCCeEEEeccchhhhhhHH
Q psy8225 192 EVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY-----QTGLTSDDVVYTTLPLYHTAGGLL 266 (479)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~-----~~~~~~~d~~~~~~pl~h~~g~~~ 266 (479)
...... ......++++++++|||||||.||+|+++|.++......... .......+++++.+|++|.+++..
T Consensus 179 ~~~~~~---~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~ 255 (541)
T TIGR03205 179 GAAAPA---EWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYALTV 255 (541)
T ss_pred cCCCCC---CCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHHHH
Confidence 211111 112345678999999999999999999999998765432211 112234578999999999999877
Q ss_pred HHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHH
Q psy8225 267 GIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKR 344 (479)
Q Consensus 267 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~ 344 (479)
.++.++..|+++++...+++..+++.|+++++|++.++|+++..|.+........++++|.++ |+++++++.+++.+.
T Consensus 256 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~ 335 (541)
T TIGR03205 256 ILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERK 335 (541)
T ss_pred HHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHH
Confidence 788899999999988888999999999999999999999999998876544444567888877 888999999999998
Q ss_pred hCcceeeeeccccccCcccccC----CCCCCcccccCccccCCCceeeEEeCC-CCCCccccCCCccccccCCCCceEEE
Q psy8225 345 FGLDRICEFYGATEGNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDP-ETSEPIRNKDGLCIPCKAEEPGILIG 419 (479)
Q Consensus 345 ~~~~~v~~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~-~~~~~i~~~~g~~~~~~~~~~Gel~v 419 (479)
++. ++++.||+||++..+... ...++++|.+++ ++.+++++. ++++ +++.|+.|||++
T Consensus 336 ~~~-~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~v~~~d~~~~----------~~~~g~~Gel~v 398 (541)
T TIGR03205 336 TGL-KLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLP------GIELDVVSLDDPTK----------VLPPGEVGELRI 398 (541)
T ss_pred hCC-CeecccccccCCcccccCCCCCCCCCCCcceecc------CceeEEEecCCCCc----------cCCCCCeeEEEE
Confidence 998 899999999998665432 234567777654 455555431 3343 568899999999
Q ss_pred EeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 420 MIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 420 ~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+ |+ +++.||+++++.+++.+. ++||+|||++++++||++++.||.||++
T Consensus 399 ~----~~-~~~~gy~~~~~~~~~~~~------~~~~~TGD~~~~~~~g~l~i~GR~~~~i 447 (541)
T TIGR03205 399 R----GP-NVTRGYWNRPEESAEAFV------GDRFLTGDIGYMDTDGYFFLVDRKKDMI 447 (541)
T ss_pred e----cC-CccccccCChhhhHhhhc------cCCcccCceEEEcCCceEEEEccccCeE
Confidence 8 77 899999999887776654 6799999999999999999999999975
No 82
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-51 Score=413.35 Aligned_cols=370 Identities=18% Similarity=0.245 Sum_probs=300.8
Q ss_pred HHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCc
Q psy8225 54 VRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQ 127 (479)
Q Consensus 54 ~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~ 127 (479)
+.+++.+|+++|+.+. +|| |+.++++++|..|.+.|+++||+|+++++|++++++++|||+++|++++|+++..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 4567889999999862 999 9999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCCC
Q psy8225 128 RQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKP 207 (479)
Q Consensus 128 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (479)
+.+++.++++.++++++|+++..... .. .. ..++++........... ......
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~------~~---~~-----------------~~~~~~~~~~~~~~~~~-~~~~~~ 134 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG------RT---DV-----------------EDLAAFIASADALEPAD-TPSIPP 134 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc------cc---cc-----------------cchhhhhhhcccccccc-CCCCCC
Confidence 99999999999999999997643210 00 00 00111111000000000 022346
Q ss_pred CCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChh
Q psy8225 208 SDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSAS 287 (479)
Q Consensus 208 ~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 287 (479)
+++++++|||||||.||+|.++|+++...+........+..+|++++.+|++|.+|++..+..++..|+++++.+.+++.
T Consensus 135 ~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~ 214 (488)
T PRK09088 135 ERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPK 214 (488)
T ss_pred CCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHH
Confidence 78999999999999999999999999887777666667888999999999999999888888899999999998888999
Q ss_pred HHHHHHH--HhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCccc
Q psy8225 288 NFWKDCI--KYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANL 363 (479)
Q Consensus 288 ~~~~~i~--~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~ 363 (479)
.++..+. ++++|+++.+|++++.+.+........++++|.++ |++++.+..+.+.+. +. ++++.||+||++.+.
T Consensus 215 ~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~-g~-~v~~~YG~TE~~~~~ 292 (488)
T PRK09088 215 RTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD-GI-PMVDGFGMSEAGTVF 292 (488)
T ss_pred HHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh-CC-ceeeeeccccccccc
Confidence 9998886 48999999999999999877654445678899877 788988888887754 77 899999999998653
Q ss_pred cc-C-----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcc
Q psy8225 364 MN-A-----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKK 437 (479)
Q Consensus 364 ~~-~-----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~ 437 (479)
.. . ..+++++|.|.| +++++++|++ +. +++.|+.|||+++ |+ +++.||++++
T Consensus 293 ~~~~~~~~~~~~~~~vG~~~~------~~~~~i~d~~-~~----------~~~~g~~Gel~v~----~~-~~~~gY~~~~ 350 (488)
T PRK09088 293 GMSVDCDVIRAKAGAAGIPTP------TVQTRVVDDQ-GN----------DCPAGVPGELLLR----GP-NLSPGYWRRP 350 (488)
T ss_pred ccCCCcccccccCCccccCCC------CcEEEEECCC-CC----------CCcCCCceEEEEE----CC-ccchhhcCCh
Confidence 21 1 234567777665 7889988854 44 5688899999998 77 8999999998
Q ss_pred hhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 438 ASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 438 ~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+.+++.+. ++|||+|||+|++|++|++++.||.||++
T Consensus 351 ~~~~~~~~-----~~g~~~TGDl~~~~~~g~l~i~GR~~d~i 387 (488)
T PRK09088 351 QATARAFT-----GDGWFRTGDIARRDADGFFWVVDRKKDMF 387 (488)
T ss_pred hhhhhhhc-----CCCCeeecceEEEcCCCcEEEeccccceE
Confidence 77776553 37999999999999999999999999974
No 83
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=3.7e-51 Score=419.75 Aligned_cols=415 Identities=19% Similarity=0.233 Sum_probs=307.8
Q ss_pred cHHHHHHhhhhcccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH
Q psy8225 33 DLKQLISGMQKTLPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVC 108 (479)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~ 108 (479)
|..++.+.+..+.+.++.+++.+.+..+|+++|+++. +|| ||.++++++|..|.+.|+++||+|+++++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~ 85 (567)
T PLN02479 6 DIDDLPKNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYE 85 (567)
T ss_pred ccccccCccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHH
Confidence 3344444555555566889999999999999999887 999 999999999999999999999999999999999999
Q ss_pred HHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCC--------cceEEecCCCCCC----C
Q psy8225 109 MWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIP--------GISLYAAGTRRKP----Q 176 (479)
Q Consensus 109 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~----~ 176 (479)
+++||+++|++++|+++.++.+++.++++.++++++|+++...+...++..... ...+++....... .
T Consensus 86 ~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (567)
T PLN02479 86 AHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQ 165 (567)
T ss_pred HHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccc
Confidence 999999999999999999999999999999999999999876554444322111 1122222211100 0
Q ss_pred ccCCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEec
Q psy8225 177 AKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTL 256 (479)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~ 256 (479)
.....+...+.+++.......... .....++.++++|||||||.||+|++||+++..........+++..++++++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (567)
T PLN02479 166 YALGKGAIEYEKFLETGDPEFAWK--PPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTL 243 (567)
T ss_pred cccccCcccHHHHHhccccccccC--CCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEec
Confidence 001112223333333211111000 122334678899999999999999999999876665555567788899999999
Q ss_pred cchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCC-CCCCceeEEE--ecCC
Q psy8225 257 PLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPE-DTQHSVKMMI--GNGL 333 (479)
Q Consensus 257 pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~-~~l~~lr~~~--G~~l 333 (479)
|++|.+++...+...+..|.++++ ..+++..+++.++++++|++.++|++++.|.+...... ..+++++.++ |+++
T Consensus 244 p~~h~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~ 322 (567)
T PLN02479 244 PMFHCNGWCFTWTLAALCGTNICL-RQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAP 322 (567)
T ss_pred chhhhhhHHHHHHHHhhcCceEec-cCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCC
Confidence 999999876555555666666554 57899999999999999999999999999987654332 2467787765 8899
Q ss_pred ChhhHHHHHHHhCcceeeeeccccccCcccccCC------CC--------CCcccccCccccCCCcee-eEEeCCCCCCc
Q psy8225 334 RPQVWEPFQKRFGLDRICEFYGATEGNANLMNAD------GK--------VGAVGYIPYIAIPFYPVG-LIKCDPETSEP 398 (479)
Q Consensus 334 ~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~------~~--------~~~~g~~~~~~~~~~~~~-~~i~d~~~~~~ 398 (479)
++++.++|.+. +. ++++.||+||+++.+.... .. ..+.|.+.+ ++. ++++|++++.
T Consensus 323 ~~~~~~~~~~~-~~-~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~------g~~~~~i~d~~~~~- 393 (567)
T PLN02479 323 PPSVLFAMSEK-GF-RVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYI------GLEGLDVVDTKTMK- 393 (567)
T ss_pred CHHHHHHHHhc-CC-ceecccccccccccccceeccccccccCcccccccccccCCCcC------CcCceeEEcCCCCc-
Confidence 99999998875 77 8999999999864332110 00 012333322 332 5667766555
Q ss_pred cccCCCccccccCC--CCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCC
Q psy8225 399 IRNKDGLCIPCKAE--EPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTG 476 (479)
Q Consensus 399 i~~~~g~~~~~~~~--~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~ 476 (479)
+++.+ +.|||+++ |+ +++.|||++++.+.+.+. +|||+|||+|++|++|+++++||.|
T Consensus 394 ---------~~~~~g~~~GEl~v~----g~-~~~~GY~~~~~~t~~~~~------~g~~~TGDl~~~~~~g~l~~~GR~~ 453 (567)
T PLN02479 394 ---------PVPADGKTMGEIVMR----GN-MVMKGYLKNPKANEEAFA------NGWFHSGDLGVKHPDGYIEIKDRSK 453 (567)
T ss_pred ---------ccCCCCCCceEEEEe----cc-chhhhhhcCcccccchhc------CCceecceeEEEcCCccEEEecccc
Confidence 34443 57999998 77 899999999887776653 7899999999999999999999999
Q ss_pred CCC
Q psy8225 477 DAC 479 (479)
Q Consensus 477 d~~ 479 (479)
|++
T Consensus 454 d~i 456 (567)
T PLN02479 454 DII 456 (567)
T ss_pred ceE
Confidence 974
No 84
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=3e-51 Score=458.85 Aligned_cols=390 Identities=17% Similarity=0.235 Sum_probs=317.2
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|.++++.+|+++|+++. +|| ||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 458 ~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~vp 537 (1296)
T PRK10252 458 TTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLP 537 (1296)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEe
Confidence 46889999999999999999988 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
++|..+.+++.++++.+++++++++......+.. .+.+.+... ............
T Consensus 538 ld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~-----------------~~~~~~~~~~~~---- 592 (1296)
T PRK10252 538 LDTGYPDDRLKMMLEDARPSLLITTADQLPRFAD----VPDLTSLCY-----------------NAPLAPQGAAPL---- 592 (1296)
T ss_pred cCccCHHHHHHHHHHhCCCCEEEECcchhhhccc----CCCceeeec-----------------ccccccccCCCC----
Confidence 9999999999999999999999998765433221 111111111 111100000000
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
....++++++++|||||||.||||+++|+++.+.+.+....+++..+|++++..|++|..+. +.++.++..|+++++.+
T Consensus 593 ~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~~~~ 671 (1296)
T PRK10252 593 QLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSV-WEFFWPFIAGAKLVMAE 671 (1296)
T ss_pred CCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhH-HHHHHHHhCCCEEEECC
Confidence 22256789999999999999999999999999999888888999999999999999998885 66788999999999976
Q ss_pred ---CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCC--CCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeecc
Q psy8225 283 ---KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPE--DTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYG 355 (479)
Q Consensus 283 ---~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~--~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG 355 (479)
..++..+++.++++++|++.++|++++.+++...... ..++++|.++ |+++++++.+.|.+.++. ++++.||
T Consensus 672 ~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~-~l~n~YG 750 (1296)
T PRK10252 672 PEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLTGA-PLHNLYG 750 (1296)
T ss_pred hhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcCCC-EEEeCCC
Confidence 3588999999999999999999999998887643322 2357888776 899999999999998887 9999999
Q ss_pred ccccCcccccCCCCCC----cccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccc
Q psy8225 356 ATEGNANLMNADGKVG----AVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFN 431 (479)
Q Consensus 356 ~tE~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~ 431 (479)
+||++..++....... ..+.+++++.+.+++++.|+|+. ++ +++.|+.|||+++ |+ +++.
T Consensus 751 ~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~-~~----------~~~~g~~Gel~i~----g~-~~~~ 814 (1296)
T PRK10252 751 PTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDAR-MR----------PVPPGVAGDLYLT----GI-QLAQ 814 (1296)
T ss_pred cchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCC-CC----------CCCCCCceEEEec----cc-ccch
Confidence 9999865543221111 12333445555568999999854 44 6789999999998 77 8999
Q ss_pred cccCcchhHHH-HHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 432 GYADKKASEKK-ILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 432 gY~~~~~~~~~-~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||+++++.+.+ +..++|.++++||+|||+|++++||+++++||.||+|
T Consensus 815 GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~i 863 (1296)
T PRK10252 815 GYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQL 863 (1296)
T ss_pred hhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeE
Confidence 99998776654 4455555667899999999999999999999999975
No 85
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=4.1e-51 Score=459.28 Aligned_cols=411 Identities=17% Similarity=0.163 Sum_probs=310.0
Q ss_pred chhHHHHHHHhhcCCCccccEE-----------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY-----------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGL 113 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~-----------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~ 113 (479)
.++.++|+++++.+|+++|+++ . +|| ||.++++++|++|++.|+++|++|+|+++|++++++++|||
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~ 315 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGV 315 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 4689999999999999999985 1 999 99999999999999999999999999999999999999999
Q ss_pred hhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh---HHHHHHhhccC----CcceEEecCCCCCCCccCCCccc--
Q psy8225 114 SKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL---SEALTEVKDSI----PGISLYAAGTRRKPQAKVLPSTT-- 184 (479)
Q Consensus 114 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-- 184 (479)
+++|++++|++|.++.+++.++++.+++++++++... ...+....... ..+..+........ .....
T Consensus 316 l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 391 (1389)
T TIGR03443 316 LKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSL----VGGSLEG 391 (1389)
T ss_pred HhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccc----ccccccc
Confidence 9999999999999999999999999999999986542 11111111100 00111111100000 00000
Q ss_pred cccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhh
Q psy8225 185 LLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGG 264 (479)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~ 264 (479)
...+.+................++++++|+|||||||.||||+++|+++...+......+++..+|+++...|++|..++
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 471 (1389)
T TIGR03443 392 GETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGIAHDPIQ 471 (1389)
T ss_pred ccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCceecchH
Confidence 00011100000000000123457889999999999999999999999999988888888889999999999999998775
Q ss_pred HHHHHHHHhcCceEEecCC---CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHH
Q psy8225 265 LLGIGQCLLGGSTVVIRSK---FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWE 339 (479)
Q Consensus 265 ~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~ 339 (479)
..++.++..|+++++.+. .++..+++.+.++++|++.++|++++.|..... ..+++||.++ |+++++.+.+
T Consensus 472 -~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~---~~~~~lr~~~~gGe~l~~~~~~ 547 (1389)
T TIGR03443 472 -RDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT---TPIPSLHHAFFVGDILTKRDCL 547 (1389)
T ss_pred -HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc---ccCCCccEEEEecccCCHHHHH
Confidence 678889999999999764 367899999999999999999999998875432 2467888876 8999999999
Q ss_pred HHHHHhCcceeeeeccccccCcccccCC-----CCC---CcccccCccccCCCceeeEEeCCCCCCccccCCCccccccC
Q psy8225 340 PFQKRFGLDRICEFYGATEGNANLMNAD-----GKV---GAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKA 411 (479)
Q Consensus 340 ~~~~~~~~~~v~~~YG~tE~~~~~~~~~-----~~~---~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~ 411 (479)
++.+.++..++++.||+||++..++... ... .......|++.+++++++.|+|++... .+++.
T Consensus 548 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~---------~~~~~ 618 (1389)
T TIGR03443 548 RLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRT---------QTCGV 618 (1389)
T ss_pred HHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCC---------CcCCC
Confidence 9988765459999999999976543211 000 001122344555568999999865321 26789
Q ss_pred CCCceEEEEeecCCcccccccccCcchhHHHHHhh-hc----------------------cCCCcEEEcCCeeEEecCCc
Q psy8225 412 EEPGILIGMIKESRAESHFNGYADKKASEKKILRN-VY----------------------SHGDAAFNTGDILIKDKFQY 468 (479)
Q Consensus 412 ~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~-~~----------------------~~~~g~~~TGD~g~~d~dG~ 468 (479)
|+.|||+++ || +++.||+|+++.+.+.|.. .| .+++|||+|||+|++++||+
T Consensus 619 G~~GEL~i~----G~-~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~ 693 (1389)
T TIGR03443 619 GEVGEIYVR----AG-GLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGN 693 (1389)
T ss_pred CCceEEEec----cc-ccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCC
Confidence 999999998 88 9999999998877766531 11 12468999999999999999
Q ss_pred EEEecCCCCCC
Q psy8225 469 FYFKDRTGDAC 479 (479)
Q Consensus 469 l~~~GR~~d~~ 479 (479)
|+|+||.||++
T Consensus 694 l~~~GR~dd~I 704 (1389)
T TIGR03443 694 VECCGRADDQV 704 (1389)
T ss_pred EEEecccCCEE
Confidence 99999999985
No 86
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-50 Score=415.62 Aligned_cols=409 Identities=17% Similarity=0.205 Sum_probs=313.3
Q ss_pred cccchhHHHHHHHhhcCCCccccEEE------Eeh-hhHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhh
Q psy8225 44 TLPTYARPLFVRTIREVPMTGAYKYT------VTF-QVEDHSNRIANFFKS-KGLQRGDAVALFMEGQPEYVCMWLGLSK 115 (479)
Q Consensus 44 ~~~~~l~~~l~~~~~~~p~~~a~~~~------~Ty-~l~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~e~~~~~lA~~~ 115 (479)
+.|.++.++|++++..+|+++|+.+. +|| ||.+++.++|.+|.+ .|+++||+|+++++|+++++++++||++
T Consensus 7 ~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~ 86 (576)
T PRK05620 7 DVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVAC 86 (576)
T ss_pred cCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 35677999999999999999999863 999 999999999999987 7999999999999999999999999999
Q ss_pred cCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCC----ccCCCccccccccC
Q psy8225 116 IGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQ----AKVLPSTTLLDEEL 190 (479)
Q Consensus 116 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~ 190 (479)
+|+++++++|..+.+++.++++.++++++|++......+.+.....+..+ ++..+...... .........|.+++
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (576)
T PRK05620 87 MGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALL 166 (576)
T ss_pred cCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHh
Confidence 99999999999999999999999999999999877766666555554433 22222211100 00001123345544
Q ss_pred CcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhh--hhhcCCCCCCeEEEeccchhhhhhHHHH
Q psy8225 191 PEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISG--RYQTGLTSDDVVYTTLPLYHTAGGLLGI 268 (479)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~--~~~~~~~~~d~~~~~~pl~h~~g~~~~~ 268 (479)
........ .....++++++++|||||||.||+|+++|+++....... ...+++..++++++.+|++|.+|+. .+
T Consensus 167 ~~~~~~~~---~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~-~~ 242 (576)
T PRK05620 167 DGRSTVYD---WPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWG-VP 242 (576)
T ss_pred hcCCCcCC---CCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhH-HH
Confidence 32221111 133456889999999999999999999999986544332 2346788899999999999999874 45
Q ss_pred HHHHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHh
Q psy8225 269 GQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRF 345 (479)
Q Consensus 269 ~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~ 345 (479)
+.++..|+++++.. .+++..+++.++++++|.+..+|+++..++...........++|.++ |+++++++.++|++.+
T Consensus 243 ~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~ 322 (576)
T PRK05620 243 LAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY 322 (576)
T ss_pred HHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh
Confidence 67888999998875 57899999999999999999999999888765433333345788876 8899999999999999
Q ss_pred CcceeeeeccccccCcccccC-CC----------CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCC
Q psy8225 346 GLDRICEFYGATEGNANLMNA-DG----------KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEP 414 (479)
Q Consensus 346 ~~~~v~~~YG~tE~~~~~~~~-~~----------~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~ 414 (479)
+. ++++.||+||++...... +. ...++|++.+ +++++++|+ +..+ +.+.++.
T Consensus 323 ~~-~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~~~--g~~~--------~~~~~~~ 385 (576)
T PRK05620 323 GV-DVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPA------SLEYRIVND--GQVM--------ESTDRNE 385 (576)
T ss_pred CC-ceeeeccccccccceeeeccCCccccccccccccccCCcCC------ceeEEEecC--Cccc--------cCCCCCc
Confidence 98 899999999998654311 10 1124455433 688888885 4422 2345678
Q ss_pred ceEEEEeecCCcccccccccCcchhH----HHHHh--------hhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 415 GILIGMIKESRAESHFNGYADKKASE----KKILR--------NVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 415 Gel~v~~~~~~~~~~~~gY~~~~~~~----~~~~~--------~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|||+++ |+ .++.||+++++.+ ...|. +.+. .+|||+|||+|++|+||++++.||.||++
T Consensus 386 Gel~v~----g~-~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i 456 (576)
T PRK05620 386 GEIQVR----GN-WVTASYYHSPTEEGGGAASTFRGEDVEDANDRFT-ADGWLRTGDVGSVTRDGFLTIHDRARDVI 456 (576)
T ss_pred eEEEEE----cC-cccccccCCccccccccccccccccchhhhcccc-cCCcEecCceEEEcCCceEEEEechhhhh
Confidence 999998 77 8999999987665 11111 0111 36899999999999999999999999975
No 87
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-50 Score=415.96 Aligned_cols=402 Identities=22% Similarity=0.278 Sum_probs=311.3
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|.+.+..+|+++|+++. +|| ||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vp 103 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQ 103 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEec
Confidence 45889999999999999999987 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecC--CCCC-CCcc-----------C------CCc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAG--TRRK-PQAK-----------V------LPS 182 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~-----------~------~~~ 182 (479)
++|..+.+++.++++.+++++++++......+...........+++.. .... +... . ...
T Consensus 104 i~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (563)
T PRK06710 104 TNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSESET 183 (563)
T ss_pred cCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhcccccccccccccch
Confidence 999999999999999999999999876544433322211111111110 0000 0000 0 000
Q ss_pred cccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh-hcCCC-CCCeEEEeccchh
Q psy8225 183 TTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY-QTGLT-SDDVVYTTLPLYH 260 (479)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~-~~~~~-~~d~~~~~~pl~h 260 (479)
...++.+.... . ..........++.++++|||||||.||+|.++|+++...+..... .+... .++++++.+|++|
T Consensus 184 ~~~~~~~~~~~-~--~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~ 260 (563)
T PRK06710 184 IHLWNSVEKEV-N--TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFH 260 (563)
T ss_pred hhhhhhhhhcc-c--cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchHH
Confidence 00011110000 0 000001123578999999999999999999999998755433222 22333 3468899999999
Q ss_pred hhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhH
Q psy8225 261 TAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVW 338 (479)
Q Consensus 261 ~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~ 338 (479)
.+|+...+..++..|+++++.+.+++..+++.++++++|++.++|+++..+++........++++|.++ |+++++++.
T Consensus 261 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~~ 340 (563)
T PRK06710 261 VYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEVQ 340 (563)
T ss_pred HHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHHH
Confidence 999876677788999999998889999999999999999999999999999886655445568899876 788999999
Q ss_pred HHHHHHhCcceeeeeccccccCcccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCC
Q psy8225 339 EPFQKRFGLDRICEFYGATEGNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEP 414 (479)
Q Consensus 339 ~~~~~~~~~~~v~~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~ 414 (479)
+++.+.++. .+++.||+||++...... ...++++|++.+ ++.++++|+++++ +++.|+.
T Consensus 341 ~~~~~~~~~-~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~~~~~~~----------~~~~g~~ 403 (563)
T PRK06710 341 EKFETVTGG-KLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWP------DTEAMIMSLETGE----------ALPPGEI 403 (563)
T ss_pred HHHHHhhCC-CEecccccccCccccccCcccccccCCccCCCCC------CCeEEEEECCCCc----------cCCCCCc
Confidence 999999988 899999999998654321 234566777655 6888888877666 5688999
Q ss_pred ceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 415 GILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 415 Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|||+++ |+ .++.||+++++.+...+. +|||+|||+|++|+||++++.||.||++
T Consensus 404 Gel~v~----g~-~~~~gY~~~~~~~~~~~~------~g~~~TGD~~~~~~~g~~~~~GR~dd~i 457 (563)
T PRK06710 404 GEIVVK----GP-QIMKGYWNKPEETAAVLQ------DGWLHTGDVGYMDEDGFFYVKDRKKDMI 457 (563)
T ss_pred eEEEEe----cC-ccchhhhCChHHHhhhcc------cCcccccceEEEcCCCcEEEeeccccEE
Confidence 999998 77 899999999887776553 7899999999999999999999999974
No 88
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.6e-50 Score=413.59 Aligned_cols=404 Identities=21% Similarity=0.240 Sum_probs=312.0
Q ss_pred cchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFK-SKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~-~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
+.++.++|.+++..+|+++|+++. +|| ||.+++.++|+.|. +.|+++||+|+++++|++++++++|||+++|+++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 103 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTV 103 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 356889999999999999999976 999 99999999999997 5799999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCC-------------------ccCCC
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQ-------------------AKVLP 181 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~ 181 (479)
+|++|.++.+++.+++++++++++++++.....+.++....+...++......... .....
T Consensus 104 v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (560)
T PRK08751 104 VNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRIN 183 (560)
T ss_pred eccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccCCC
Confidence 99999999999999999999999999887665555544443322222211000000 00000
Q ss_pred ccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcC----CCCC-CeEEEec
Q psy8225 182 STTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTG----LTSD-DVVYTTL 256 (479)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~----~~~~-d~~~~~~ 256 (479)
....+.+.+......... ......+++++++|||||||.||+|.++|.++...+......+. +..+ +++++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (560)
T PRK08751 184 GAIRFREALALGRKHSMP--TLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITAL 261 (560)
T ss_pred ccccHHHHHhccCCCCCC--CCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEec
Confidence 001111111111110000 12345688999999999999999999999999877665544433 3333 5778889
Q ss_pred cchhhhhhHHHHHHHHhcCceEEec-CCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCC
Q psy8225 257 PLYHTAGGLLGIGQCLLGGSTVVIR-SKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGL 333 (479)
Q Consensus 257 pl~h~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l 333 (479)
|++|.+|+....+..+..|++.++. ..+++..+++.++++++|++..+|.++..+.+........++++|.++ |+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~ 341 (560)
T PRK08751 262 PLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAV 341 (560)
T ss_pred ChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCC
Confidence 9999999766555666666665554 467899999999999999999999999999887655555678899877 7889
Q ss_pred ChhhHHHHHHHhCcceeeeeccccccCcccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccc
Q psy8225 334 RPQVWEPFQKRFGLDRICEFYGATEGNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPC 409 (479)
Q Consensus 334 ~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~ 409 (479)
++++.+.|++.++. .+++.||+||++..+... ...++++|.|.+ +++++++|+ ++. ++
T Consensus 342 ~~~~~~~~~~~~~~-~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~------~~~v~i~d~-~~~----------~~ 403 (560)
T PRK08751 342 QRSVAERWKQVTGL-TLVEAYGLTETSPAACINPLTLKEYNGSIGLPIP------STDACIKDD-AGT----------VL 403 (560)
T ss_pred CHHHHHHHHHHhCC-eEEEeeccccCCCceecccccccccCCCcCccCC------CceEEEECC-CCC----------CC
Confidence 99999999999998 899999999998665432 233466777655 788998884 444 56
Q ss_pred cCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 410 KAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 410 ~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+.|+.|||+++ |+ .++.||+++++.+.+.++ .+|||+|||+|++|++|++++.||.||++
T Consensus 404 ~~g~~Gel~v~----~~-~~~~gy~~~~~~~~~~~~-----~~g~~~TGD~~~~~~~g~l~i~GR~~d~i 463 (560)
T PRK08751 404 AIGEIGELCIK----GP-QVMKGYWKRPEETAKVMD-----ADGWLHTGDIARMDEQGFVYIVDRKKDMI 463 (560)
T ss_pred CCCCceEEEEe----cC-ccchhhcCChhhhhhccc-----cCCCccccceEEEcCCceEEEEeechhhe
Confidence 88999999998 77 899999999887776553 37899999999999999999999999974
No 89
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-50 Score=410.37 Aligned_cols=404 Identities=20% Similarity=0.281 Sum_probs=311.8
Q ss_pred hhcccchhHHHHHHHhhcCCCccccEEE-------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q psy8225 42 QKTLPTYARPLFVRTIREVPMTGAYKYT-------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGL 113 (479)
Q Consensus 42 ~~~~~~~l~~~l~~~~~~~p~~~a~~~~-------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~ 113 (479)
....|.++.++|+++++.+|+++++... +|| ||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~ 84 (542)
T PRK06018 5 MQDWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGI 84 (542)
T ss_pred hhcCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHH
Confidence 3456788999999999999999999842 899 99999999999999999999999999999999999999999
Q ss_pred hhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceE-EecCCCCCCCccCCCccccccccCCc
Q psy8225 114 SKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISL-YAAGTRRKPQAKVLPSTTLLDEELPE 192 (479)
Q Consensus 114 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (479)
+++|++++|+++..+.+++.++++.+++++++++.+..+.+.++....+.+.. ++..+..............+.+++..
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (542)
T PRK06018 85 MGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAE 164 (542)
T ss_pred HhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhcc
Confidence 99999999999999999999999999999999998877776665554443332 22222111000000112233333332
Q ss_pred CCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHH-H-HhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHH
Q psy8225 193 VSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAM-F-MAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQ 270 (479)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~-~-~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~ 270 (479)
..... .......+++++++|||||||.||+|++||++.+ . ........+++..+|+++...|++|.+++... +.
T Consensus 165 ~~~~~---~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~-~~ 240 (542)
T PRK06018 165 ADGDF---AWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIA-FS 240 (542)
T ss_pred CCccc---CcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHH-Hh
Confidence 21111 1123456788999999999999999999998743 2 22233446678899999999999999887544 46
Q ss_pred HHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCc
Q psy8225 271 CLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGL 347 (479)
Q Consensus 271 ~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~ 347 (479)
++..|+++++.. .+++..+++.++++++|++.++|++++.|.+........++++|.++ |+++++++.++|++ ++.
T Consensus 241 ~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~~~ 319 (542)
T PRK06018 241 APSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-MGV 319 (542)
T ss_pred hhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-hCC
Confidence 778899998865 57889999999999999999999999999887665555678899877 89999999999999 888
Q ss_pred ceeeeeccccccCcccccCCC--------------CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCC
Q psy8225 348 DRICEFYGATEGNANLMNADG--------------KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEE 413 (479)
Q Consensus 348 ~~v~~~YG~tE~~~~~~~~~~--------------~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~ 413 (479)
++++.||+||++.++..... ...++|+|.+ +++++++|++ ++.+ ++..+.
T Consensus 320 -~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~------g~~i~v~d~~-~~~~--------~~~~~~ 383 (542)
T PRK06018 320 -EVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPF------GVEMKITDDA-GKEL--------PWDGKT 383 (542)
T ss_pred -CeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCC------CcEEEEECCC-CCCC--------CCCCCc
Confidence 89999999999866532210 1234555443 7889988864 4422 222236
Q ss_pred CceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 414 PGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 414 ~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.|||+++ |+ +++.||++... ..+ +.+|||+|||+|++|+||++++.||.||++
T Consensus 384 ~Gel~i~----g~-~~~~gy~~~~~---~~~-----~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i 436 (542)
T PRK06018 384 FGRLKVR----GP-AVAAAYYRVDG---EIL-----DDDGFFDTGDVATIDAYGYMRITDRSKDVI 436 (542)
T ss_pred eeEEEEe----cC-CcchhhhcCcc---cEe-----cCCcEEEcCCEEEEcCCccEEEEecCCCeE
Confidence 7999998 77 89999998422 111 247999999999999999999999999974
No 90
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.7e-51 Score=488.38 Aligned_cols=385 Identities=17% Similarity=0.213 Sum_probs=318.2
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|.++++++|+++|+++. +|| ||.++++++|+.|.++|+++|++|+|+++|++++++++|||+++|++++|
T Consensus 3095 ~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vp 3174 (3956)
T PRK12467 3095 RLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYVP 3174 (3956)
T ss_pred ccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeec
Confidence 57999999999999999999998 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
++|.++.+++.+++++++++++|++......+... .....+.++... .. ......+ .
T Consensus 3175 ld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~----~~~~~~~~~~~~------------~~----~~~~~~~---~ 3231 (3956)
T PRK12467 3175 LDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP----AGDTALTLDRLD------------LN----GYSENNP---S 3231 (3956)
T ss_pred CCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc----cCCceeeecchh------------hc----ccCCCCC---c
Confidence 99999999999999999999999987654332111 111222221110 00 0000001 1
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
....++++++|+|||||||+||||+++|+++.+.+......+++..+|++++..|++|..+. ..++.++..|+++++.+
T Consensus 3232 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~l~i~~ 3310 (3956)
T PRK12467 3232 TRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQ-ERFLWTLICGGCLVVRD 3310 (3956)
T ss_pred ccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHH-HHHHHHHhCCCEEEECC
Confidence 33467889999999999999999999999999999888888999999999999999999874 77889999999999987
Q ss_pred C--CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 283 K--FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 283 ~--~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
. +++..+++.|.++++|++.++|++++.|.+... ...+++||.++ ||++++++.++|.+.++...+++.||+||
T Consensus 3311 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE 3388 (3956)
T PRK12467 3311 NDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTE 3388 (3956)
T ss_pred cccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccch
Confidence 5 689999999999999999999999999886533 23567898876 89999999999998886558999999999
Q ss_pred cCcccccCC--C------CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccc
Q psy8225 359 GNANLMNAD--G------KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHF 430 (479)
Q Consensus 359 ~~~~~~~~~--~------~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~ 430 (479)
++..++... . ...++|+|+ ++++++++|++ ++ +++.|+.|||+++ |+ .++
T Consensus 3389 ~~~~~~~~~~~~~~~~~~~~~~iG~p~------~~~~~~v~d~~-~~----------~vp~G~~GEL~i~----G~-~v~ 3446 (3956)
T PRK12467 3389 AVVTVTLWKCGGDAVCEAPYAPIGRPV------AGRSIYVLDGQ-LN----------PVPVGVAGELYIG----GV-GLA 3446 (3956)
T ss_pred hEeeeEEEecccccccCCCCCCCcccc------CCCEEEEECCC-CC----------CCCCCCCceEEEc----ch-hhh
Confidence 986554211 1 123455544 48999999844 44 6799999999998 88 999
Q ss_pred ccccCcchhHHHHH-hhhc-cCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 431 NGYADKKASEKKIL-RNVY-SHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 431 ~gY~~~~~~~~~~~-~~~~-~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.||+|+++.|.+.| .++| .++++||+|||+|++++||+|+|+||+||+|
T Consensus 3447 ~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~i 3497 (3956)
T PRK12467 3447 RGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQV 3497 (3956)
T ss_pred hhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceE
Confidence 99999987776554 4444 3457899999999999999999999999986
No 91
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-50 Score=408.31 Aligned_cols=376 Identities=17% Similarity=0.212 Sum_probs=302.0
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.+.++.+.|.+++..+|+++|+.+. +|| ||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 5677999999999999999999886 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcc
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTE 200 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (479)
+|+++.++.+++.++++.++++.+++++.....+..... .++.++... .. ... ...
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-----~~~~~~~~~-------------~~-~~~-~~~---- 168 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADD-----AVAVIDPAT-------------AG-AEE-SGG---- 168 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhc-----ceEEeccch-------------hh-hhc-CCC----
Confidence 999999999999999999999999998766554433211 111111100 00 000 000
Q ss_pred cccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHH--hhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceE
Q psy8225 201 DIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFM--AISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTV 278 (479)
Q Consensus 201 ~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~--~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~ 278 (479)
.....++.++++|||||||.||+|+++|...... .......+++..++++++.+|++|.+|+. .++.++..|+++
T Consensus 169 --~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~~~ 245 (516)
T PRK13383 169 --RPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLG-MLMLTIALGGTV 245 (516)
T ss_pred --CCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHH-HHHHHHhcCCEE
Confidence 0112345678999999999999999999743221 12223455678899999999999999974 466788899999
Q ss_pred EecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeec
Q psy8225 279 VIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFY 354 (479)
Q Consensus 279 v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~Y 354 (479)
++...+++..+++.++++++|.+.++|+++..|.+.... ....++++|.++ |++++++++++|.+.++. .+++.|
T Consensus 246 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~-~v~~~Y 324 (516)
T PRK13383 246 LTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYGD-ILYNGY 324 (516)
T ss_pred EECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcCc-hhhhcc
Confidence 998889999999999999999999999999998875432 123467899877 899999999999999998 899999
Q ss_pred cccccCcccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccc
Q psy8225 355 GATEGNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHF 430 (479)
Q Consensus 355 G~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~ 430 (479)
|+||++...... ...++++|+|+| +++++++|++ ++ ++++|+.|||+++ |+ .++
T Consensus 325 G~tE~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~d~~-~~----------~~~~g~~Gel~v~----g~-~~~ 382 (516)
T PRK13383 325 GSTEVGIGALATPADLRDAPETVGKPVA------GCPVRILDRN-NR----------PVGPRVTGRIFVG----GE-LAG 382 (516)
T ss_pred cccccccceeccccccccCCCcccCCCC------CcEEEEECCC-CC----------CCCCCCceEEEEe----cC-ccc
Confidence 999998654422 234567777665 7889999854 44 5688999999998 77 899
Q ss_pred ccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 431 NGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 431 ~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.||++.+.. .+ .+|||+|||+|++|++|++++.||.||++
T Consensus 383 ~~Y~~~~~~---~~------~~g~~~TGDl~~~d~~G~l~i~GR~~~~i 422 (516)
T PRK13383 383 TRYTDGGGK---AV------VDGMTSTGDMGYLDNAGRLFIVGREDDMI 422 (516)
T ss_pred ccccCCchh---he------ecCceecceeEEEcCCccEEEeccccceE
Confidence 999987532 11 17999999999999999999999999974
No 92
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=7.8e-51 Score=413.50 Aligned_cols=371 Identities=16% Similarity=0.151 Sum_probs=284.0
Q ss_pred hHHHHHHHhhcCCCccccEEE-------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 49 ARPLFVRTIREVPMTGAYKYT-------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 49 l~~~l~~~~~~~p~~~a~~~~-------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
+.+.|+++++++|+++|+++. +|| ||.++++++|+.|.++ ++||+|+++++|++++++++|||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 678999999999999999876 899 9999999999999988 799999999999999999999999999986
Q ss_pred eeecCC--------cchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCc
Q psy8225 121 AFINTN--------QRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPE 192 (479)
Q Consensus 121 v~l~~~--------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (479)
+ +++. ...+++.++++.++++++|++......+..... .+. ..+ +......
T Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~---~~~--------------~~~~~~~ 140 (525)
T PRK05851 82 S-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDS---SVT---VHD--------------LATAAHT 140 (525)
T ss_pred c-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhc---ccc---ccc--------------ccccccc
Confidence 5 3332 233556678999999999998776544433211 110 000 0000000
Q ss_pred CCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCC-CCCeEEEeccchhhhhhHHHHHHH
Q psy8225 193 VSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLT-SDDVVYTTLPLYHTAGGLLGIGQC 271 (479)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~-~~d~~~~~~pl~h~~g~~~~~~~~ 271 (479)
... .. . ....++++++|+|||||||.||||+++|.++...+......+++. .+|++++.+|++|.+|+. .++.+
T Consensus 141 ~~~-~~-~--~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~~~~ 215 (525)
T PRK05851 141 NRS-AS-L--TPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLA-FLLTA 215 (525)
T ss_pred ccc-cc-C--CCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHH-HHHHH
Confidence 000 00 0 123568999999999999999999999999999888877778888 899999999999999984 56789
Q ss_pred HhcCceEEecCC--C--ChhHHHHHHHHhcccEEEEehHHHHHHhcCCC-CCCCCCCceeEEE--ecCCChhhHHHHHHH
Q psy8225 272 LLGGSTVVIRSK--F--SASNFWKDCIKYNCTVAQYIGEMCRYLLAVPE-KPEDTQHSVKMMI--GNGLRPQVWEPFQKR 344 (479)
Q Consensus 272 l~~G~~~v~~~~--~--~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~-~~~~~l~~lr~~~--G~~l~~~~~~~~~~~ 344 (479)
+..|+++++.+. + ++..+++.+.++++|++...|.++..+.+... .....+++||.++ |+++++++.++|.+.
T Consensus 216 l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~ 295 (525)
T PRK05851 216 ALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATA 295 (525)
T ss_pred HHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHH
Confidence 999999998762 4 57789999999999987554444444433221 2234578899876 899999999999875
Q ss_pred ---hCc--ceeeeeccccccCcccccC-C-----------------CCCCcccccCccccCCCceeeEEeCCCCCCcccc
Q psy8225 345 ---FGL--DRICEFYGATEGNANLMNA-D-----------------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRN 401 (479)
Q Consensus 345 ---~~~--~~v~~~YG~tE~~~~~~~~-~-----------------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~ 401 (479)
+|. ..+++.||+||++..+... + .+.+++|+|++ +++++++|++++.
T Consensus 296 ~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~------g~~v~i~d~~~~~---- 365 (525)
T PRK05851 296 MAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIP------GMEVRISPGDGAA---- 365 (525)
T ss_pred HhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCC------CcEEEEECCCCCc----
Confidence 443 2599999999997654321 1 12245566554 8999999876544
Q ss_pred CCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 402 KDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 402 ~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++.|+.|||+++ |+ +++.||++++..+ .+|||+|||+|++| +|+|+|+||+||++
T Consensus 366 ------~~~~g~~GEl~v~----g~-~~~~GY~~~~~~~----------~~~~~~TGDl~~~~-~G~l~~~GR~dd~i 421 (525)
T PRK05851 366 ------GVAGREIGEIEIR----GA-SMMSGYLGQAPID----------PDDWFPTGDLGYLV-DGGLVVCGRAKELI 421 (525)
T ss_pred ------cCCCCCeEEEEEe----cC-chhhccccCCccC----------CCCceeccceEEEE-CCEEEEEeecCCEE
Confidence 4688999999998 77 8999999987532 27899999999997 79999999999985
No 93
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-49 Score=407.26 Aligned_cols=404 Identities=21% Similarity=0.241 Sum_probs=302.9
Q ss_pred ccchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCcee
Q psy8225 45 LPTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVA 120 (479)
Q Consensus 45 ~~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 120 (479)
.+.++.++|++.++.+|+++|+.+. +|| ||.+++.++|..|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~ 95 (545)
T PRK08162 16 VPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVL 95 (545)
T ss_pred ccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEE
Confidence 4466789999999999999999886 999 999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCC-CCccCCCccccccccCCcCCCCCCc
Q psy8225 121 AFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRK-PQAKVLPSTTLLDEELPEVSAKSPT 199 (479)
Q Consensus 121 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (479)
+|+++..+.+++.++++.++++.++++.+....+.+.....+..+.+.+..... ...........+++++.........
T Consensus 96 vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (545)
T PRK08162 96 NTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDPDFAW 175 (545)
T ss_pred eccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCccccc
Confidence 999999999999999999999999999887766665544333322222221110 0000001122333333322111111
Q ss_pred ccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEE
Q psy8225 200 EDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVV 279 (479)
Q Consensus 200 ~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v 279 (479)
. ......++++++|||||||.||||+++|+++...+......+.+..++++++.+|++|.+|+...+...+. |++.+
T Consensus 176 ~--~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~-~g~~~ 252 (545)
T PRK08162 176 T--LPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAAR-AGTNV 252 (545)
T ss_pred c--CCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHH-ccEEE
Confidence 0 12234578999999999999999999999887666555556678888999999999999987665554554 44555
Q ss_pred ecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCC-ceeEEE-ecCCChhhHHHHHHHhCcceeeeecccc
Q psy8225 280 IRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQH-SVKMMI-GNGLRPQVWEPFQKRFGLDRICEFYGAT 357 (479)
Q Consensus 280 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~-~lr~~~-G~~l~~~~~~~~~~~~~~~~v~~~YG~t 357 (479)
+...+++..+++.++++++|++.++|++++.|++........+. .++.+. |+.+++++.+.+++ ++. ++++.||+|
T Consensus 253 ~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~-~~~~~YG~t 330 (545)
T PRK08162 253 CLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEE-IGF-DLTHVYGLT 330 (545)
T ss_pred EeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHH-hCC-ceeeccccc
Confidence 55678999999999999999999999999999876544332333 344444 88899999988876 587 899999999
Q ss_pred ccCcccccCCC--------------CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccC-C-CCceEEEEe
Q psy8225 358 EGNANLMNADG--------------KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKA-E-EPGILIGMI 421 (479)
Q Consensus 358 E~~~~~~~~~~--------------~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~-~-~~Gel~v~~ 421 (479)
|+++.+..... ..++.|.+.+ . ...+.++|+++++ +++. | +.|||+++
T Consensus 331 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~--~~~~~i~d~~~~~----------~~~~~g~~~Gel~v~- 394 (545)
T PRK08162 331 ETYGPATVCAWQPEWDALPLDERAQLKARQGVRYP---L--QEGVTVLDPDTMQ----------PVPADGETIGEIMFR- 394 (545)
T ss_pred ccCcceeecccccccccCCccchhhccCCCCcccC---C--cceEEEEcCCCCc----------ccCCCCCceeEEEEe-
Confidence 98643322110 1123333222 1 2346677876665 4444 3 46999998
Q ss_pred ecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 422 KESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 422 ~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
|+ .++.||+++++.+...+. +|||+|||+|++|+||+++++||.||++
T Consensus 395 ---g~-~~~~gY~~~~~~~~~~~~------~g~~~TGDl~~~d~dg~l~~~GR~~~~i 442 (545)
T PRK08162 395 ---GN-IVMKGYLKNPKATEEAFA------GGWFHTGDLAVLHPDGYIKIKDRSKDII 442 (545)
T ss_pred ---cC-cchhhhcCChhhhHHHhh------CCCcccCceEEEcCCccEEEEecccceE
Confidence 77 899999999888877664 7899999999999999999999999974
No 94
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.3e-49 Score=403.38 Aligned_cols=381 Identities=20% Similarity=0.255 Sum_probs=306.1
Q ss_pred hHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeec
Q psy8225 49 ARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 49 l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~ 124 (479)
+.+.|.+.+..+|+++|+.+. +|| ||.+++.++|..|.+.|+++|++|+++++|+.++++++|||+++|++++|++
T Consensus 2 ~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 81 (502)
T TIGR01734 2 LIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVD 81 (502)
T ss_pred HHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCC
Confidence 678999999999999999887 999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccC
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKK 204 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (479)
+.++.+++.++++..+++.++++........ ...++.... ............. ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-------~~~~~~~~~--------------~~~~~~~~~~~~~---~~~ 137 (502)
T TIGR01734 82 TSIPSERIEMIIEAAGPELVIHTAELSIDAV-------GTQIITLSA--------------LEQAETSGGPVSF---DHA 137 (502)
T ss_pred CcChHHHHHHHHHhcCCCEEEeccccccccc-------CCceEEchH--------------hhhhhhhcCCccc---ccc
Confidence 9999999999999999999999875432211 111111110 0111111100000 022
Q ss_pred CCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC-
Q psy8225 205 NKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK- 283 (479)
Q Consensus 205 ~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~- 283 (479)
...++.++++|||||||.||+|+++|+++...+......++...++++++.+|++|..++ ..++.++..|+++++.+.
T Consensus 138 ~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~ 216 (502)
T TIGR01734 138 VKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLDKD 216 (502)
T ss_pred CCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhH-HHHHHHHHCCCEEEEcCHH
Confidence 356789999999999999999999999999888877777888899999999999999876 567789999999998774
Q ss_pred --CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeecccccc
Q psy8225 284 --FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEG 359 (479)
Q Consensus 284 --~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~ 359 (479)
.++..+++.+.+++++.+..+|++++.+..........+++++.++ |+++++++.+++.+.++...+++.||+||+
T Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~ 296 (502)
T TIGR01734 217 ITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEA 296 (502)
T ss_pred HhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcc
Confidence 4788999999999999999999999887765444444577888766 889999999999999854499999999998
Q ss_pred CcccccC--------CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccc
Q psy8225 360 NANLMNA--------DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFN 431 (479)
Q Consensus 360 ~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~ 431 (479)
++.+... .....++|.+.+ ++++.++|++ +. +++.|+.|||+++ |+ .++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~vg~~~~------~~~~~i~~~~-~~----------~~~~g~~Gel~v~----g~-~~~~ 354 (502)
T TIGR01734 297 TVAVTSVKITQEILDQYPRLPIGFAKP------DMNLFIMDEE-GE----------PLPEGEKGEIVIV----GP-SVSK 354 (502)
T ss_pred eEEEEEEEccccccccCCccccccccC------CCEEEEECCC-CC----------CCCCCCeeEEEEc----cc-cccc
Confidence 7544321 122234565544 7999999865 44 5688999999998 77 8999
Q ss_pred cccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 432 GYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 432 gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||+++++.+.+.+.+ .++.+||+|||+|++|++ +++++||.||++
T Consensus 355 gy~~~~~~~~~~~~~--~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i 399 (502)
T TIGR01734 355 GYLNNPEKTAEAFFS--HEGQPAYRTGDAGTITDG-QLFYQGRLDFQI 399 (502)
T ss_pred cccCCcccchHhhee--CCCcEEEECCCEEEEECC-EEEEeccccCeE
Confidence 999988777655421 234579999999999977 999999999974
No 95
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.9e-50 Score=485.87 Aligned_cols=388 Identities=17% Similarity=0.221 Sum_probs=318.4
Q ss_pred cchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
+.++.++|.++++++|+++|+++. +|| ||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 367999999999999999999987 999 9999999999999999999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCccc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTED 201 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (479)
|++|.++.+++.+++++++++++|++......+. ......++..+... ..+........
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~--------------~~~~~~~~~~~--- 648 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLP----LAAGVQVLDLDRPA--------------AWLEGYSEENP--- 648 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCC----cccCceEEEecCcc--------------hhhccCCCCCC---
Confidence 9999999999999999999999999876443221 11122233222110 00000011111
Q ss_pred ccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec
Q psy8225 202 IKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR 281 (479)
Q Consensus 202 ~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 281 (479)
.....++++++|+|||||||.||||+++|+++.+.+.+....+++..++++++.+|++|..+. ..++.++..|+++++.
T Consensus 649 ~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~-~~~~~~L~~G~~l~i~ 727 (5163)
T PRK12316 649 GTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSV-WEFFWPLMSGARLVVA 727 (5163)
T ss_pred CCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHH-HHHHHHHhCCCEEEEC
Confidence 123457889999999999999999999999999999988888999999999999999999986 6688899999999997
Q ss_pred C---CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 282 S---KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 282 ~---~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
+ .+++..+++.++++++|++.++|++++.|.+.... ..++++|.++ |+++++++.++|.+.++..++++.||+
T Consensus 728 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~--~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 805 (5163)
T PRK12316 728 APGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDV--ASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGP 805 (5163)
T ss_pred CccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcccc--ccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCc
Confidence 5 46899999999999999999999999999865432 2467888776 899999999999887765599999999
Q ss_pred cccCcccccC-----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccc
Q psy8225 357 TEGNANLMNA-----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFN 431 (479)
Q Consensus 357 tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~ 431 (479)
||++..+... .....++|+| +++++++|+|++ ++ +|+.|+.|||+++ |+ +++.
T Consensus 806 TE~~~~~~~~~~~~~~~~~~~iG~p------~~~~~~~i~d~~-~~----------~~p~G~~GEl~i~----G~-~v~~ 863 (5163)
T PRK12316 806 TEAAIDVTHWTCVEEGGDSVPIGRP------IANLACYILDAN-LE----------PVPVGVLGELYLA----GR-GLAR 863 (5163)
T ss_pred ChheeeeeEEecccccCCCCCCccc------cCCCEEEEECCC-CC----------CCCCCCceEEEec----cc-ccCh
Confidence 9998543321 1223345554 448999999965 44 6799999999998 88 9999
Q ss_pred cccCcchhHHHHH-hhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 432 GYADKKASEKKIL-RNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 432 gY~~~~~~~~~~~-~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||+|+++.+.+.| .++|.++++||+|||+|++|+||+|+|+||+||+|
T Consensus 864 GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~i 912 (5163)
T PRK12316 864 GYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQV 912 (5163)
T ss_pred hhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEE
Confidence 9999987776544 44455667899999999999999999999999985
No 96
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-49 Score=408.59 Aligned_cols=393 Identities=17% Similarity=0.237 Sum_probs=292.1
Q ss_pred hhHHHHHHHhhcCCCccccEE-----------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhh
Q psy8225 48 YARPLFVRTIREVPMTGAYKY-----------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLS 114 (479)
Q Consensus 48 ~l~~~l~~~~~~~p~~~a~~~-----------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~ 114 (479)
++.++|++++..+|+++|+++ . +|| ||.+++.++|++|.++| .+||+|+++++|++++++++|||+
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~ 80 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGAL 80 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHH
Confidence 477899999999999999984 3 999 99999999999999999 689999999999999999999999
Q ss_pred hcCceeeeecC---CcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCC---cceEEecCCCCCCCccCCCccccccc
Q psy8225 115 KIGVVAAFINT---NQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIP---GISLYAAGTRRKPQAKVLPSTTLLDE 188 (479)
Q Consensus 115 ~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (479)
++|++++|+++ ..+.+++.++++++++++++++++....+.+...... ...++..+.. +
T Consensus 81 ~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~ 145 (578)
T PRK05850 81 QAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL---------------D 145 (578)
T ss_pred HcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc---------------c
Confidence 99999999997 4578899999999999999999876665544322111 0111111100 0
Q ss_pred cCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhh-cC-----CCCCCeEEEeccchhhh
Q psy8225 189 ELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQ-TG-----LTSDDVVYTTLPLYHTA 262 (479)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~-~~-----~~~~d~~~~~~pl~h~~ 262 (479)
.... . ... ......+++++++|||||||.||||+++|++++..+...... +. ...++++++.+|++|..
T Consensus 146 ~~~~-~--~~~--~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 220 (578)
T PRK05850 146 LDSP-R--GSD--ARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDM 220 (578)
T ss_pred cccC-C--ccc--cCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCc
Confidence 0000 0 000 023456889999999999999999999999998776554432 12 35578999999999999
Q ss_pred hhHHHHHHHHhcCceEEecCCC----ChhHHHHHHHHhcccEEEEehHHHH-HHhcCC---CCCCCCCCceeEEE--ecC
Q psy8225 263 GGLLGIGQCLLGGSTVVIRSKF----SASNFWKDCIKYNCTVAQYIGEMCR-YLLAVP---EKPEDTQHSVKMMI--GNG 332 (479)
Q Consensus 263 g~~~~~~~~l~~G~~~v~~~~~----~~~~~~~~i~~~~~t~~~~~p~~l~-~l~~~~---~~~~~~l~~lr~~~--G~~ 332 (479)
|++..++.++..|+++++.+.. ++..+++.+.+++++.. .+|.++. .+.... ......++++|.++ |++
T Consensus 221 g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~ 299 (578)
T PRK05850 221 GLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSER 299 (578)
T ss_pred hhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCC
Confidence 9888889999999999987642 68899999999999855 5665543 333221 11233567899877 788
Q ss_pred CChhhHHHHHHHhCc-----ceeeeeccccccCcccccCC-CC----------CCcccccC-----------ccccCCCc
Q psy8225 333 LRPQVWEPFQKRFGL-----DRICEFYGATEGNANLMNAD-GK----------VGAVGYIP-----------YIAIPFYP 385 (479)
Q Consensus 333 l~~~~~~~~~~~~~~-----~~v~~~YG~tE~~~~~~~~~-~~----------~~~~g~~~-----------~~~~~~~~ 385 (479)
+++++.++|.+.|+. ..+++.||+||++..+.... .. ..+.|.+. ..+.+. +
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~ 378 (578)
T PRK05850 300 VHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-S 378 (578)
T ss_pred CCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-C
Confidence 999999999988742 26899999999875443211 00 00122111 111121 3
Q ss_pred eeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhcc------CCCcEEEcCC
Q psy8225 386 VGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYS------HGDAAFNTGD 459 (479)
Q Consensus 386 ~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~------~~~g~~~TGD 459 (479)
.+++++|++++. +|+.|+.|||+++ |+ +++.||+++++.+.+.|..... .++|||+|||
T Consensus 379 ~~~~ivd~~~~~----------~~~~g~~Gel~v~----g~-~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGD 443 (578)
T PRK05850 379 PTVRIVDPDTCI----------ECPAGTVGEIWVH----GD-NVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGD 443 (578)
T ss_pred CEEEEEcCCCCc----------CCCCCCEEEEEEe----cC-cccccccCChhhhHHHhhcccccccccCCCCCeeeccc
Confidence 677888876555 6789999999998 77 8999999998888776632111 1257999999
Q ss_pred eeEEecCCcEEEecCCCCCC
Q psy8225 460 ILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 460 ~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|++| ||+|+++||+||++
T Consensus 444 l~~~~-~G~l~~~GR~~d~i 462 (578)
T PRK05850 444 LGFIS-EGELFIVGRIKDLL 462 (578)
T ss_pred eeeEE-CCEEEEEcccccEE
Confidence 99998 99999999999974
No 97
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.7e-49 Score=402.58 Aligned_cols=402 Identities=22% Similarity=0.273 Sum_probs=309.7
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKS-KGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
.++.++|.++++++|+++|+++. +|| ||.++++++|..|.+ .|+++|++|+++++|++++++++|||+++|++++
T Consensus 23 ~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 102 (560)
T PRK08974 23 QSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVV 102 (560)
T ss_pred ccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEe
Confidence 45889999999999999999987 999 999999999999985 7999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccC-------------------CCc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKV-------------------LPS 182 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~ 182 (479)
|++|..+.+++.++++.+++++++++.+....+.++........++............ ...
T Consensus 103 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (560)
T PRK08974 103 NVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLPD 182 (560)
T ss_pred ccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccccCCC
Confidence 9999999999999999999999999876555554443322211111111000000000 000
Q ss_pred cccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhc---CCCCCCeEEEeccch
Q psy8225 183 TTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQT---GLTSDDVVYTTLPLY 259 (479)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~~~~~pl~ 259 (479)
...+.+......... ........+++++++|||||||.||+|.++|.++...+......+ ....++.++..+|++
T Consensus 183 ~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 260 (560)
T PRK08974 183 AISFRSALHKGRRMQ--YVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLY 260 (560)
T ss_pred cccHHHHhhccCCCC--CCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcHH
Confidence 000011111010000 001224578899999999999999999999999987655433222 234467888999999
Q ss_pred hhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChh
Q psy8225 260 HTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQ 336 (479)
Q Consensus 260 h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~ 336 (479)
|.+++....+..+..|+++++.. ..++..+++.++++++|.+..+|++++.|..........++++|.++ |+++++.
T Consensus 261 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~ 340 (560)
T PRK08974 261 HIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQA 340 (560)
T ss_pred HHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCHH
Confidence 99998776777788888876654 56788999999999999999999999999887655555678899877 7889999
Q ss_pred hHHHHHHHhCcceeeeeccccccCcccccCC----CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCC
Q psy8225 337 VWEPFQKRFGLDRICEFYGATEGNANLMNAD----GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAE 412 (479)
Q Consensus 337 ~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~ 412 (479)
+.++|++.+|. .+++.||+||++..+.... ..++++|.|+| ++.++++|++ +. +++.|
T Consensus 341 ~~~~~~~~~g~-~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~------~~~~~i~~~~-~~----------~~~~g 402 (560)
T PRK08974 341 VAERWVKLTGQ-YLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVP------STEIKLVDDD-GN----------EVPPG 402 (560)
T ss_pred HHHHHHHHhCC-cEEeeecccccCceeeccCCCCcccCCccccCcC------CCEEEEECCC-CC----------CCCCC
Confidence 99999999998 8999999999886654322 23456676654 7889988854 44 56889
Q ss_pred CCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 413 EPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 413 ~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+.|||+++ |+ .++.||+++++.+.+.+. +|||+|||+|++|++|++++.||.||++
T Consensus 403 ~~Gel~v~----g~-~~~~gy~~~~~~~~~~~~------~g~~~TGDl~~~~~~g~l~i~GR~~d~i 458 (560)
T PRK08974 403 EPGELWVK----GP-QVMLGYWQRPEATDEVIK------DGWLATGDIAVMDEEGFLRIVDRKKDMI 458 (560)
T ss_pred CceEEEEe----cC-CcchhhcCChhhhhhhhh------cCCcccCCEEEEcCCceEEEEecccceE
Confidence 99999998 77 899999998877776553 7899999999999999999999999974
No 98
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.5e-49 Score=474.56 Aligned_cols=388 Identities=18% Similarity=0.215 Sum_probs=317.0
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|.++++.+|+++|+++. +|| ||.++++++|+.|.++|+++|++|+++++|++++++++|||+++|++++|
T Consensus 1574 ~~~~~~~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~vp 1653 (3956)
T PRK12467 1574 RLVHQLIEDQAAATPEAVALVFGEQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAYVP 1653 (3956)
T ss_pred ccHHHHHHHHHHhCCCCeEEEeCCcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCceeee
Confidence 57899999999999999999987 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
++|.++.+++.++++++++++++++......+. ......++.++... ..+.......+ .
T Consensus 1654 ldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~--------------~~~~~~~~~~~---~ 1712 (3956)
T PRK12467 1654 LDPEYPRERLAYMIEDSGIELLLTQSHLQARLP----LPDGLRSLVLDQED--------------DWLEGYSDSNP---A 1712 (3956)
T ss_pred cCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCc----cccCCcEEEecccc--------------chhccCCCCCC---C
Confidence 999999999999999999999999876443221 11122233222111 00011111111 1
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
....++++++|+|||||||+||||+++|+++.+.+......+++..+|++++..|++|..+. +.++.++..|+++++.+
T Consensus 1713 ~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lvi~~ 1791 (3956)
T PRK12467 1713 VNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSFAFDVSV-WELFWPLINGARLVIAP 1791 (3956)
T ss_pred CCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEEcC
Confidence 23457889999999999999999999999999998888888899999999999999999885 67888999999999976
Q ss_pred C---CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeecccc
Q psy8225 283 K---FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGAT 357 (479)
Q Consensus 283 ~---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~t 357 (479)
. .++..+++.|+++++|++.++|++++.|.+.... ...+++||.++ |+++++++.+.|.+.++...+++.||+|
T Consensus 1792 ~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~-~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 1870 (3956)
T PRK12467 1792 PGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQ-VEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPT 1870 (3956)
T ss_pred hhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhccc-cccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCC
Confidence 3 4789999999999999999999999999875322 23467899876 8999999999999988755899999999
Q ss_pred ccCcccccCC--------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccc
Q psy8225 358 EGNANLMNAD--------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESH 429 (479)
Q Consensus 358 E~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~ 429 (479)
|++..++... ....++|+| ++++++.++|++ ++ +|+.|..|||+++ |+ ++
T Consensus 1871 E~t~~~t~~~~~~~~~~~~~~~~iG~p------~~~~~~~vld~~-~~----------~vp~G~~GEl~i~----G~-~v 1928 (3956)
T PRK12467 1871 ETAVDVTHWTCRRKDLEGRDSVPIGQP------IANLSTYILDAS-LN----------PVPIGVAGELYLG----GV-GL 1928 (3956)
T ss_pred cCEEeEEEEeccccccccCCCCCcccc------cCCCEEEEECCC-CC----------CCCCCCceEEEec----cc-cc
Confidence 9986554211 112345554 448999999854 44 6799999999998 77 99
Q ss_pred cccccCcchhHHHHH-hhhcc-CCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 430 FNGYADKKASEKKIL-RNVYS-HGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 430 ~~gY~~~~~~~~~~~-~~~~~-~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+.||+|+++.+.+.| .++|. ++++||+|||+|++++||.|+|+||+||+|
T Consensus 1929 ~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qV 1980 (3956)
T PRK12467 1929 ARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQV 1980 (3956)
T ss_pred cccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceE
Confidence 999999988777655 34443 256799999999999999999999999986
No 99
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.8e-49 Score=480.94 Aligned_cols=392 Identities=16% Similarity=0.160 Sum_probs=315.9
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|.++++.+|+++|+++. +|| ||.++++++|..|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 2003 ~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vp 2082 (5163)
T PRK12316 2003 PGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYVP 2082 (5163)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEee
Confidence 47899999999999999999987 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
++|.++.+++.++++++++++++++.+....+.. ......+.+.... .+... ....+ .
T Consensus 2083 ld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~----~~~~~~~~~~~~~-----------~~~~~----~~~~~---~ 2140 (5163)
T PRK12316 2083 LDPNYPAERLAYMLEDSGAALLLTQRHLLERLPL----PAGVARLPLDRDA-----------EWADY----PDTAP---A 2140 (5163)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEeChhhhhhccc----ccccceEeccchh-----------hhhcc----CccCC---C
Confidence 9999999999999999999999998765433211 1111121111100 00000 00000 1
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
....++++++|+|||||||.||||+++|+++.+.+......+++..+|+++...|++|..+. ..++.++..|+++++.+
T Consensus 2141 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~~~~~~ 2219 (5163)
T PRK12316 2141 VQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAH-EQWFHPLLNGARVLIRD 2219 (5163)
T ss_pred CCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHH-HHHHHHHhCCCEEEeCC
Confidence 33567899999999999999999999999999999888888899999999999999998764 77889999999998876
Q ss_pred --CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 283 --KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 283 --~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
.+++..+++.++++++|++.++|++++.|.+...... ...+||.++ |+++++++.++|.+.++..++++.||+||
T Consensus 2220 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 2298 (5163)
T PRK12316 2220 DELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTE 2298 (5163)
T ss_pred cccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchh
Confidence 3689999999999999999999999999887643332 235888876 89999999999998876558999999999
Q ss_pred cCcccccCCC---CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccC
Q psy8225 359 GNANLMNADG---KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYAD 435 (479)
Q Consensus 359 ~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~ 435 (479)
++..++.... .... +...+++.++++++++|+|++ ++ +|+.|+.|||+++ |+ +++.||+|
T Consensus 2299 ~~~~~~~~~~~~~~~~~-~~~~~iG~p~~~~~~~i~d~~-~~----------~vp~g~~GEl~i~----G~-~v~~GY~~ 2361 (5163)
T PRK12316 2299 AVVTPLLWKCRPQDPCG-AAYVPIGRALGNRRAYILDAD-LN----------LLAPGMAGELYLG----GE-GLARGYLN 2361 (5163)
T ss_pred heeeeeeeecccccccC-CCcCCcccccCCCEEEEECCC-CC----------CCCCCCeeEEEec----ch-hhcccccC
Confidence 9866543211 1110 011233444448999999854 34 6799999999998 88 99999999
Q ss_pred cchhHHHHHh-hhccC-CCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 436 KKASEKKILR-NVYSH-GDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 436 ~~~~~~~~~~-~~~~~-~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++.|.+.|. ++|.. +++||+|||+|++++||+|+|+||+||+|
T Consensus 2362 ~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~i 2407 (5163)
T PRK12316 2362 RPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQV 2407 (5163)
T ss_pred ChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeE
Confidence 9887776653 33432 56899999999999999999999999985
No 100
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9e-49 Score=393.53 Aligned_cols=356 Identities=20% Similarity=0.210 Sum_probs=291.6
Q ss_pred hhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHH
Q psy8225 57 IREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHIL 132 (479)
Q Consensus 57 ~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l 132 (479)
....++++|+++. +|| ||.++++++|..|+ ++|+|+++++|+++++++++||+++|++++|+++..+.+++
T Consensus 10 ~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l 84 (471)
T PRK07787 10 AAAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAER 84 (471)
T ss_pred hcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHH
Confidence 3456788998886 999 99999999999996 46899999999999999999999999999999999999999
Q ss_pred HHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCCCCCcEE
Q psy8225 133 IHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLA 212 (479)
Q Consensus 133 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (479)
.++++.+++++++++.+.. ....+.+.+. .. ...+.. .....++++++
T Consensus 85 ~~~l~~~~~~~il~~~~~~------~~~~~~~~~~-~~------------~~~~~~-------------~~~~~~~~~a~ 132 (471)
T PRK07787 85 RHILADSGAQAWLGPAPDD------PAGLPHVPVR-LH------------ARSWHR-------------YPEPDPDAPAL 132 (471)
T ss_pred HHHHHhcCCCEEEecCCcc------cccccceeee-cc------------cccccc-------------CCCCCCCceEE
Confidence 9999999999999976310 0111111000 00 000000 02235688999
Q ss_pred EEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHH
Q psy8225 213 YIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKD 292 (479)
Q Consensus 213 i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~ 292 (479)
++|||||||.||+|+++|+++...+......+++..++++++.+|++|..|+...++.++..|+++++...+++..+++.
T Consensus 133 i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 212 (471)
T PRK07787 133 IVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQA 212 (471)
T ss_pred EEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHH
Confidence 99999999999999999999998888777788889999999999999999998889999999999999988999999999
Q ss_pred HHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccC---C
Q psy8225 293 CIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNA---D 367 (479)
Q Consensus 293 i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~---~ 367 (479)
++ ++++++.++|+++..|.+.... ...++++|.++ |++++++++++|.+.++. ++++.||+||++..+... .
T Consensus 213 i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~-~~~~~YG~tE~~~~~~~~~~~~ 289 (471)
T PRK07787 213 LS-EGGTLYFGVPTVWSRIAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALTGH-RPVERYGMTETLITLSTRADGE 289 (471)
T ss_pred Hh-hCceEEEcchHHHHHHHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHcCC-CeecccCccccCcceecCCCCc
Confidence 99 9999999999999998875432 23567888877 788999999999999998 899999999998654432 2
Q ss_pred CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcccccc-CC-CCceEEEEeecCCcccccccccCcchhHHHHHh
Q psy8225 368 GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCK-AE-EPGILIGMIKESRAESHFNGYADKKASEKKILR 445 (479)
Q Consensus 368 ~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~-~~-~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~ 445 (479)
..++++|+|++ +++++++|++ +. +++ .| ..|||+++ |+ +++.||+++++.+++.+.
T Consensus 290 ~~~~~vG~~~~------g~~~~i~d~~-~~----------~~~~~~~~~Gei~v~----g~-~~~~gy~~~~~~t~~~~~ 347 (471)
T PRK07787 290 RRPGWVGLPLA------GVETRLVDED-GG----------PVPHDGETVGELQVR----GP-TLFDGYLNRPDATAAAFT 347 (471)
T ss_pred ccCCcccccCC------CcEEEEECCC-CC----------CCCCCCCCceEEEEE----Cc-ccchhhcCChhhchhccc
Confidence 34567777665 7899999866 44 233 23 37999998 77 899999999887776553
Q ss_pred hhccCCCcEEEcCCeeEEecCCcEEEecCC-CCCC
Q psy8225 446 NVYSHGDAAFNTGDILIKDKFQYFYFKDRT-GDAC 479 (479)
Q Consensus 446 ~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~-~d~~ 479 (479)
.+|||+|||+|++|+||+++++||+ ||++
T Consensus 348 -----~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i 377 (471)
T PRK07787 348 -----ADGWFRTGDVAVVDPDGMHRIVGRESTDLI 377 (471)
T ss_pred -----CCCceecCceEEEcCCCCEEEeCCCCceeE
Confidence 3789999999999999999999996 7764
No 101
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-48 Score=395.15 Aligned_cols=381 Identities=21% Similarity=0.245 Sum_probs=291.5
Q ss_pred HHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcc
Q psy8225 55 RTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQR 128 (479)
Q Consensus 55 ~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~ 128 (479)
.++..+|+++|+.+. +|| ||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++|+++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 466789999999862 999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCCCC
Q psy8225 129 QHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPS 208 (479)
Q Consensus 129 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (479)
.+++.++++.+++++++++.............. ...+. ..... .....+++...... + ......
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~-~~~~~-------~~~~~~~~~~~~~~---~----~~~~~~ 148 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGADL-PLRLS-FGGEI-------DGFGSFEAALAGAG---P----RLTEQP 148 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhhcc-ceEEE-ecCcc-------cccccHHHHhcccC---C----CCCCCc
Confidence 999999999999999999875443322221111 11111 11100 01111222111100 0 011223
Q ss_pred CcEEEEEccCCCCCcceEEe--ehHHHHHHh----hhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 209 DKLAYIYTSGTTGLPKAAVM--THVRAMFMA----ISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 209 ~~~~i~~TSGTTG~pK~v~~--s~~~l~~~~----~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
+.++|+|||||||.||+|++ +|.++.... ......+.+..++++++.+|++|.+++.... ..+..|+++++.+
T Consensus 149 ~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~-~~~~~g~~~~~~~ 227 (501)
T PRK13390 149 CGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCS-MVHALGGTVVLAK 227 (501)
T ss_pred ccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHH-HHHhcCceEEEcC
Confidence 46999999999999999996 455544321 1122346778899999999999998875443 3566799999988
Q ss_pred CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 283 KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
.+++..+++.|+++++|++.++|+++..|.+.... ....++++|.++ |+++++++.+.+++.++. .+++.||+||
T Consensus 228 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~-~~~~~YG~tE 306 (501)
T PRK13390 228 RFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGP-IVYEYYSSTE 306 (501)
T ss_pred CcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCC-ceeeeecccc
Confidence 89999999999999999999999999988865432 233567888876 788999999999999998 8999999999
Q ss_pred cCcccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccccccc
Q psy8225 359 GNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYA 434 (479)
Q Consensus 359 ~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~ 434 (479)
+++++... ...++++|+|.+ + .+.++|+ +++ ++++|+.|||+++ ++ +++.||+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~G~~~~------g-~~~i~d~-~~~----------~~~~g~~Gel~v~----~~-~~~~gy~ 363 (501)
T PRK13390 307 AHGMTFIDSPDWLAHPGSVGRSVL------G-DLHICDD-DGN----------ELPAGRIGTVYFE----RD-RLPFRYL 363 (501)
T ss_pred cCceEEecchhhccCCCCcCCccc------c-eEEEECC-CCC----------CCCCCCceEEEEe----cC-Ccccccc
Confidence 97654321 234567777654 5 5777884 344 5689999999998 77 8999999
Q ss_pred CcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 435 DKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
++++.+.+.+.. .+++|++|||+|++|+||++++.||.||++
T Consensus 364 ~~~~~t~~~~~~---~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i 405 (501)
T PRK13390 364 NDPEKTAAAQHP---AHPFWTTVGDLGSVDEDGYLYLADRKSFMI 405 (501)
T ss_pred CChhhhHHhhcc---CCCceEEcCceEEECCCCeEEEeeccccce
Confidence 998877765431 236899999999999999999999999975
No 102
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-48 Score=394.81 Aligned_cols=402 Identities=21% Similarity=0.267 Sum_probs=303.3
Q ss_pred hhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeee
Q psy8225 48 YARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 48 ~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l 123 (479)
++.++|.+.++++|+++|+.+. +|| ||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 4 ~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l 83 (533)
T PRK07798 4 NIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNV 83 (533)
T ss_pred cHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEec
Confidence 5889999999999999999987 999 999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
++.++.+++.++++.+++++++++......+.++....+..+ ++.++..... ........+++++........
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---- 157 (533)
T PRK07798 84 NYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGN--DLLPGAVDYEDALAAGSPERD---- 157 (533)
T ss_pred CcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCccc--ccCCccccHHHHHhccCCcCC----
Confidence 999999999999999999999999877776666655444443 3333322110 000112234444433221111
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhh---------cCC------CCCCeEEEeccchhhhhhHHH
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQ---------TGL------TSDDVVYTTLPLYHTAGGLLG 267 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~---------~~~------~~~d~~~~~~pl~h~~g~~~~ 267 (479)
......+.++++|||||||.||+|+++|+++.......... ..+ ..+++++..+|++|.++++ .
T Consensus 158 ~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~-~ 236 (533)
T PRK07798 158 FGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQW-A 236 (533)
T ss_pred CCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHH-H
Confidence 11123345789999999999999999999987654332211 111 5678899999999999974 6
Q ss_pred HHHHHhcCceEEecC--CCChhHHHHHHHHhcccEEEEehHHHH-HHhcCCC-CCCCCCCceeEEE--ecCCChhhHHHH
Q psy8225 268 IGQCLLGGSTVVIRS--KFSASNFWKDCIKYNCTVAQYIGEMCR-YLLAVPE-KPEDTQHSVKMMI--GNGLRPQVWEPF 341 (479)
Q Consensus 268 ~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~p~~l~-~l~~~~~-~~~~~l~~lr~~~--G~~l~~~~~~~~ 341 (479)
++.++..|+++++.+ .+++..+++.++++++|.+..+|..+. .+.+... .....++++|.++ |+++++++.+++
T Consensus 237 ~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~ 316 (533)
T PRK07798 237 AFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEAL 316 (533)
T ss_pred HHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHH
Confidence 778999999999998 789999999999999999999986553 3333322 2234577899877 888999999999
Q ss_pred HHHhCcceeeeeccccccCcccccC-CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCC--ceEE
Q psy8225 342 QKRFGLDRICEFYGATEGNANLMNA-DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEP--GILI 418 (479)
Q Consensus 342 ~~~~~~~~v~~~YG~tE~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~--Gel~ 418 (479)
.+.++...+++.||+||++...... .......|.. .+.++..+.++|++ ++ ++++|+. |+++
T Consensus 317 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~g~~----~~~~~~~~~i~~~~-~~----------~~~~g~~~~g~l~ 381 (533)
T PRK07798 317 LELLPNVVLTDSIGSSETGFGGSGTVAKGAVHTGGP----RFTIGPRTVVLDED-GN----------PVEPGSGEIGWIA 381 (533)
T ss_pred HHHcCCCeEEeeecccccccccccCCCCCCccCCCC----ccCCCceEEEECCC-CC----------CCCCCCCCeeEEE
Confidence 9998434899999999997554432 1122223310 12225777777754 33 4566766 7665
Q ss_pred EEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 419 GMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 419 v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
. ++ .++.||++++..+++.|.. .++++||+|||+|++|+||+++++||.||++
T Consensus 382 ~-----~~-~~~~gy~~~~~~t~~~f~~--~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i 434 (533)
T PRK07798 382 R-----RG-HIPLGYYKDPEKTAETFPT--IDGVRYAIPGDRARVEADGTITLLGRGSVCI 434 (533)
T ss_pred e-----ec-CccccccCChhhhHHhhcc--CCCCceEEcCcEEEEcCCCcEEEEccccceE
Confidence 3 55 6889999998877765532 2346799999999999999999999999974
No 103
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=2.8e-48 Score=393.98 Aligned_cols=382 Identities=20% Similarity=0.234 Sum_probs=306.1
Q ss_pred hhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeee
Q psy8225 48 YARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 48 ~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l 123 (479)
.+.++|++++..+|+++++... +|| ||.++++++|..|.+.|+.+|++|+++++|+.+++++++||+++|++++|+
T Consensus 3 ~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~ 82 (503)
T PRK04813 3 DIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPV 82 (503)
T ss_pred hHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecC
Confidence 3679999999999999999876 999 999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCccccc
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIK 203 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (479)
++.++.+++.++++..++++++++..... ....+..+... .+.+....... .....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~--------------~~~~~~~~~~~---~~~~~ 138 (503)
T PRK04813 83 DVSSPAERIEMIIEVAKPSLIIATEELPL-------EILGIPVITLD--------------ELKDIFATGNP---YDFDH 138 (503)
T ss_pred CCCChHHHHHHHHHhcCCCEEEecccccc-------cccCCcEEehH--------------Hhhhhhhcccc---ccccc
Confidence 99999999999999999999999865410 00011111110 01111100000 00012
Q ss_pred CCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC
Q psy8225 204 KNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK 283 (479)
Q Consensus 204 ~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~ 283 (479)
...++++++++|||||||.||+|.++|+++...+......+.+..++++++..|++|..+. ..++.++..|+++++.+.
T Consensus 139 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~~~ 217 (503)
T PRK04813 139 AVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVALPK 217 (503)
T ss_pred cCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEEcCh
Confidence 3456789999999999999999999999999888877777888999999999999999886 566788999999998774
Q ss_pred ---CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 284 ---FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 284 ---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
.++..+++.+.+++++++..+|++++.+..........++++|.++ |+++++++.+++.+.++...+++.||+||
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE 297 (503)
T PRK04813 218 DMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTE 297 (503)
T ss_pred hhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccch
Confidence 4788999999999999999999999887665444445678888876 89999999999999995448999999999
Q ss_pred cCcccccCC--------CCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccc
Q psy8225 359 GNANLMNAD--------GKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHF 430 (479)
Q Consensus 359 ~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~ 430 (479)
++..+.... ....++|++.+ +++++++|++ +. +++.|+.|||+++ |+ .++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~------~~~~~i~d~~-~~----------~~~~g~~Gel~v~----~~-~~~ 355 (503)
T PRK04813 298 ATVAVTSIEITDEMLDQYKRLPIGYAKP------DSPLLIIDEE-GT----------KLPDGEQGEIVIS----GP-SVS 355 (503)
T ss_pred heeEEEEEEecccccccCCCCcccccCC------CCEEEEECCC-CC----------CCCCCCceEEEEe----cc-ccc
Confidence 976543211 22334555544 7888888844 44 5678899999998 77 899
Q ss_pred ccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 431 NGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 431 ~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.||+++++.+...|.+ .++.+||+|||+|++ ++|++++.||.||++
T Consensus 356 ~gy~~~~~~~~~~~~~--~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i 401 (503)
T PRK04813 356 KGYLNNPEKTAEAFFT--FDGQPAYHTGDAGYL-EDGLLFYQGRIDFQI 401 (503)
T ss_pred cccCCChhHhHHhhcc--CCCceeEECCceEEe-eCCeEEEeccccceE
Confidence 9999998777655421 134579999999999 999999999999974
No 104
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1e-48 Score=471.42 Aligned_cols=394 Identities=18% Similarity=0.184 Sum_probs=319.2
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|.+++.++|+++|+++. +|| ||.++++++|+.|.++|+++|++|+|++++++++++++||++++|+.++|
T Consensus 3720 ~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vp 3799 (4334)
T PRK05691 3720 QSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYLP 3799 (4334)
T ss_pred cCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeC
Confidence 47889999999999999999998 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCc---ceEEecCCCCCCCccCCCccccccccCCcCCCCCCc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPG---ISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPT 199 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (479)
|+|.++.+++.++++++++++++++................ ..+++. ++...........
T Consensus 3800 ld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 3862 (4334)
T PRK05691 3800 LDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVW-----------------EEVQAGEVASHNP 3862 (4334)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeee-----------------cccccccccccCC
Confidence 99999999999999999999999987655443333222210 011111 1110000000010
Q ss_pred ccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEE
Q psy8225 200 EDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVV 279 (479)
Q Consensus 200 ~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v 279 (479)
.....+++.++|+|||||||.||||+++|+++.+.+......++++.+|+++...++++..+. +.++.++..|++++
T Consensus 3863 --~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~-~~~~~~l~~G~~l~ 3939 (4334)
T PRK05691 3863 --GIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISV-WQFLAAPLFGARVE 3939 (4334)
T ss_pred --CCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHH-HHHHHHHhCCCEEE
Confidence 123467899999999999999999999999999999888888999999999999999998875 77888999999999
Q ss_pred ecCC---CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeec
Q psy8225 280 IRSK---FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFY 354 (479)
Q Consensus 280 ~~~~---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~Y 354 (479)
+.+. .++..+++.++++++|++..+|++++.++.... ..+++||.++ ||++++++.++|.+.++..++++.|
T Consensus 3940 i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~---~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 4016 (4334)
T PRK05691 3940 IVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDR---QALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAY 4016 (4334)
T ss_pred EcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhcc---ccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCc
Confidence 8763 578899999999999999999999998875432 2467899876 8999999999999887655999999
Q ss_pred cccccCcccccCCC-CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccc
Q psy8225 355 GATEGNANLMNADG-KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGY 433 (479)
Q Consensus 355 G~tE~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY 433 (479)
|+||++..++.... .....+.++|++.|+.++++.++|.. ++ +|+.|..|||+++ |+ +++.||
T Consensus 4017 G~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~-~~----------~~p~g~~GEL~i~----G~-~v~~GY 4080 (4334)
T PRK05691 4017 GPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEA-LE----------LVPLGAVGELCVA----GT-GVGRGY 4080 (4334)
T ss_pred cCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCC-CC----------CCCCCCceEEEEe----cc-cccccc
Confidence 99999876542211 11112233455566668999999844 43 6799999999998 88 999999
Q ss_pred cCcchhHHHHH-hhhcc-CCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 434 ADKKASEKKIL-RNVYS-HGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 434 ~~~~~~~~~~~-~~~~~-~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+|+++.|++.| .++|. ++++||||||+|++++||.|+|+||+||+|
T Consensus 4081 ~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv 4128 (4334)
T PRK05691 4081 VGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQV 4128 (4334)
T ss_pred cCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcE
Confidence 99987776544 55553 357899999999999999999999999986
No 105
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.1e-48 Score=384.26 Aligned_cols=363 Identities=23% Similarity=0.274 Sum_probs=291.2
Q ss_pred eh-hhHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 71 TF-QVEDHSNRIANFFKS-KGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 71 Ty-~l~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
|| ||.+.++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 79 999999999999998 8999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEe
Q psy8225 149 ELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVM 228 (479)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~ 228 (479)
.....+..... ........ +.............. .....+++++++|||||||.||+|.+
T Consensus 81 ~~~~~~~~~~~-----~~~~~~~~-------------~~~~~~~~~~~~~~~--~~~~~~~~~~i~~TSGTtG~pK~v~~ 140 (408)
T TIGR01733 81 ALASRLAGLVL-----PIILVDPL-------------ELAALDDAPAPPPPD--APSGPDDLAYVIYTSGSTGRPKGVVV 140 (408)
T ss_pred chhhhccccCC-----ceEEechh-------------hhhhccccccccccc--CCCCCCCcEEEEEcCCCCCCCCEEEe
Confidence 75544432211 11111100 000000000000000 11356889999999999999999999
Q ss_pred ehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCC---hhHHHHHHHHhcccEEEEeh
Q psy8225 229 THVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFS---ASNFWKDCIKYNCTVAQYIG 305 (479)
Q Consensus 229 s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~---~~~~~~~i~~~~~t~~~~~p 305 (479)
||+++...+......+.+..++++++..|++|.+++ ..++.++..|+++++.+... +..+.+.++++++|.+.++|
T Consensus 141 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p 219 (408)
T TIGR01733 141 THRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTP 219 (408)
T ss_pred ccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCH
Confidence 999999988888888888999999999999999886 66788999999999887543 57889999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccC----CC----CCCcccc
Q psy8225 306 EMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNA----DG----KVGAVGY 375 (479)
Q Consensus 306 ~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~----~~----~~~~~g~ 375 (479)
.+++.|.+... ..++++|.++ |+++++++++++.+.++...+++.||+||++.++... .. ++.++|.
T Consensus 220 ~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~ 296 (408)
T TIGR01733 220 SLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGR 296 (408)
T ss_pred HHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCc
Confidence 99999988754 4578899887 8999999999999999833999999999998766321 11 1455666
Q ss_pred cCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHh-hhccCCCc-
Q psy8225 376 IPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILR-NVYSHGDA- 453 (479)
Q Consensus 376 ~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~-~~~~~~~g- 453 (479)
|.+ +++++|+|++ ++ ++++|+.|||+++ ++ +++.||+++++.+++.+. ..+...+|
T Consensus 297 ~~~------~~~~~i~~~~-~~----------~~~~g~~Gel~v~----~~-~~~~gy~~~~~~~~~~~~~~~~~~~~~~ 354 (408)
T TIGR01733 297 PLA------NTRLYVLDDD-LR----------PVPVGVVGELYIG----GP-GVARGYLNRPELTAERFVPDPFAGGDGA 354 (408)
T ss_pred ccC------CceEEEECCC-CC----------CCCCCCceEEEec----Cc-cccccccCChhhhhcceeeCCCCCCCCc
Confidence 554 7999999976 55 5688999999998 77 899999998776665443 22333334
Q ss_pred -EEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 454 -AFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 454 -~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||+|||+|++|+||++++.||.||++
T Consensus 355 ~~~~TGDl~~~d~~g~~~~~gR~~~~i 381 (408)
T TIGR01733 355 RLYRTGDLVRYLPDGNLEFLGRIDDQV 381 (408)
T ss_pred eEEECCceEEEcCCCCEEEeeccCCEE
Confidence 99999999999999999999999974
No 106
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-48 Score=400.93 Aligned_cols=384 Identities=17% Similarity=0.128 Sum_probs=295.2
Q ss_pred chhHHHHHHHhhcCCCccccEE-----E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY-----T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~-----~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 119 (479)
.++.++|+..++.+|+..++.. . +|| ||.+++.++|.+|+++|+++||+|+++++|+++++++++||+++|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 100 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLV 100 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCe
Confidence 4689999999999887766553 2 999 99999999999999999999999999999999999999999999999
Q ss_pred eeeecCCcc-------hHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCc
Q psy8225 120 AAFINTNQR-------QHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPE 192 (479)
Q Consensus 120 ~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (479)
++|+++... .+++.++++.++++++|++....+.+.+.....+...+. .+.++...
T Consensus 101 ~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 163 (579)
T PRK09192 101 PVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHVL-----------------SHAWFKAL 163 (579)
T ss_pred eEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcccccccee-----------------ehhhhccc
Confidence 999976443 589999999999999999987766655543222111111 11111111
Q ss_pred CCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh-hcCCCCCCeEEEeccchhhhhhHHHHHHH
Q psy8225 193 VSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY-QTGLTSDDVVYTTLPLYHTAGGLLGIGQC 271 (479)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~d~~~~~~pl~h~~g~~~~~~~~ 271 (479)
...... ......+++++++|||||||.||+|+++|++++..+..... .+++..+|++++.+|++|.+|+...++.+
T Consensus 164 ~~~~~~---~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~ 240 (579)
T PRK09192 164 PEADVA---LPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTP 240 (579)
T ss_pred CCCccc---cCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHH
Confidence 111000 02345688999999999999999999999999988777666 77889999999999999999987777788
Q ss_pred HhcCceEEecCC----CChhHHHHHHHHhcccEEEEehHHHHHHhcCCC---CCCCCCCceeEEE--ecCCChhhHHHHH
Q psy8225 272 LLGGSTVVIRSK----FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPE---KPEDTQHSVKMMI--GNGLRPQVWEPFQ 342 (479)
Q Consensus 272 l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~---~~~~~l~~lr~~~--G~~l~~~~~~~~~ 342 (479)
+..|+++++.+. .++..+++.+.+++++++...|..+..+..... ....+++++|.+. |+++++++.+.+.
T Consensus 241 l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~ 320 (579)
T PRK09192 241 VATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFA 320 (579)
T ss_pred HHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHH
Confidence 889999877652 268899999999999977765555544443221 1224577888876 8899999999999
Q ss_pred HHhCc-----ceeeeeccccccCcccccCCCC-------------------------------CCcccccCccccCCCce
Q psy8225 343 KRFGL-----DRICEFYGATEGNANLMNADGK-------------------------------VGAVGYIPYIAIPFYPV 386 (479)
Q Consensus 343 ~~~~~-----~~v~~~YG~tE~~~~~~~~~~~-------------------------------~~~~g~~~~~~~~~~~~ 386 (479)
+.++. ..+++.||+||++..+...+.. .+++|+++ +++
T Consensus 321 ~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~------p~~ 394 (579)
T PRK09192 321 EAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKAL------PGH 394 (579)
T ss_pred HHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcC------CCc
Confidence 88742 2589999999987554321111 12345544 478
Q ss_pred eeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecC
Q psy8225 387 GLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKF 466 (479)
Q Consensus 387 ~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~d 466 (479)
+++++|++ +. +++.|+.|||+++ |+ .++.||++++++.+. +. .+|||+|||+|++ ++
T Consensus 395 ~v~i~d~~-~~----------~~~~g~~Gel~i~----g~-~~~~gY~~~~~~~~~-~~-----~dgw~~TGDlg~~-~~ 451 (579)
T PRK09192 395 EIEIRNEA-GM----------PLPERVVGHICVR----GP-SLMSGYFRDEESQDV-LA-----ADGWLDTGDLGYL-LD 451 (579)
T ss_pred EEEEECCC-CC----------CCCCCCEEEEEec----CC-chhhhhcCCcccccc-cc-----CCceeeccceeeE-EC
Confidence 99988854 44 5678899999998 77 899999998544333 22 3789999999999 99
Q ss_pred CcEEEecCCCCCC
Q psy8225 467 QYFYFKDRTGDAC 479 (479)
Q Consensus 467 G~l~~~GR~~d~~ 479 (479)
|+++++||+||++
T Consensus 452 G~l~~~GR~dd~i 464 (579)
T PRK09192 452 GYLYITGRAKDLI 464 (579)
T ss_pred CEEEEEeccccEE
Confidence 9999999999985
No 107
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.8e-48 Score=429.12 Aligned_cols=392 Identities=18% Similarity=0.231 Sum_probs=303.5
Q ss_pred cchhHHHHHHHhhcCC-CccccEEE----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce
Q psy8225 46 PTYARPLFVRTIREVP-MTGAYKYT----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p-~~~a~~~~----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 119 (479)
+.++.+.+.+.++++| ++.|+.+. +|| ||.++++++|+.|++ |+++||+|+++++|+++++++++||+++|++
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 708 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRV 708 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCE
Confidence 3567888889888886 55776652 999 999999999999975 9999999999999999999999999999999
Q ss_pred eeeecCCcchHHHHHHHHhccceEEEeChhhHHHH--HHhhccCC-cceEEecCCCCCCCccCCCccccccccCCcCCCC
Q psy8225 120 AAFINTNQRQHILIHSIKVAECKAIIYGAELSEAL--TEVKDSIP-GISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAK 196 (479)
Q Consensus 120 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (479)
++|+++..+.+++.+++++++++++|++++..+.. ....+..+ ..+++..++.... ......+.+........
T Consensus 709 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~ 784 (1140)
T PRK06814 709 PAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQ----IGLADKIKGLLAGRFPL 784 (1140)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhcc----CChHHHHHHHhhccCCc
Confidence 99999999999999999999999999987654321 11111111 2233333221100 00000011111111000
Q ss_pred CCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCc
Q psy8225 197 SPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGS 276 (479)
Q Consensus 197 ~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~ 276 (479)
.. .+...++++++++|||||||.||||+++|+++...+......++.+.+|++++.+|++|.+|+...++.++..|+
T Consensus 785 ~~---~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~ 861 (1140)
T PRK06814 785 VY---FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGV 861 (1140)
T ss_pred cc---cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCC
Confidence 00 023467899999999999999999999999999888888888889999999999999999998778888999999
Q ss_pred eEEecCC-CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeee
Q psy8225 277 TVVIRSK-FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEF 353 (479)
Q Consensus 277 ~~v~~~~-~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~ 353 (479)
++++.+. .+...+.+.++++++|++..+|++++.+.+... ..+++++|.+. |+++++++.+.+.+.++. ++++.
T Consensus 862 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~--~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~-~~~~~ 938 (1140)
T PRK06814 862 KVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAH--PYDFRSLRYVFAGAEKVKEETRQTWMEKFGI-RILEG 938 (1140)
T ss_pred EEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc--cccccceeEEEEcCCcCCHHHHHHHHHHhCC-cEEec
Confidence 9998764 567778899999999999999999998876532 34578899877 889999999999999998 89999
Q ss_pred ccccccCcccccC---CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccc
Q psy8225 354 YGATEGNANLMNA---DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHF 430 (479)
Q Consensus 354 YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~ 430 (479)
||+||++..+... ..+++++|+|.| ++++++.+.+ ..++.|||+++ |+ +++
T Consensus 939 YG~TE~~~~~~~~~~~~~~~~~vG~p~~------g~~~~~~~~~---------------~~~~~Gel~v~----g~-~~~ 992 (1140)
T PRK06814 939 YGVTETAPVIALNTPMHNKAGTVGRLLP------GIEYRLEPVP---------------GIDEGGRLFVR----GP-NVM 992 (1140)
T ss_pred cccccccceEEecCCCCCCCCcCCccCC------CCeEEEeecC---------------CCCCceEEEEe----CC-Ccc
Confidence 9999998665422 234567777665 6777766532 13568999998 77 899
Q ss_pred ccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 431 NGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 431 ~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.||++++.... +. ...+|||+|||+|++|+||++++.||.||++
T Consensus 993 ~gY~~~~~~~~--~~---~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i 1036 (1140)
T PRK06814 993 LGYLRAENPGV--LE---PPADGWYDTGDIVTIDEEGFITIKGRAKRFA 1036 (1140)
T ss_pred hhhcCCCCCCc--cc---cCCCCeEecCCEEEECCCCeEEEEecccCee
Confidence 99998753221 10 1137999999999999999999999999985
No 108
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.6e-48 Score=469.68 Aligned_cols=386 Identities=19% Similarity=0.223 Sum_probs=315.9
Q ss_pred cchhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 46 PTYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 46 ~~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
..++.++|.++++.+|+++|+.+. +|| ||.++++++|+.|+++|+++|++|+++++|++++++++||++++|++++
T Consensus 1130 ~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~v 1209 (4334)
T PRK05691 1130 QAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAYV 1209 (4334)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEE
Confidence 357999999999999999999987 999 9999999999999999999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCccc
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTED 201 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (479)
|++|.++.+++.+++++++++++|++......+.. ......+...... .... ....+
T Consensus 1210 pld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~----~~~~~~~~~~~~~------------~~~~----~~~~~--- 1266 (4334)
T PRK05691 1210 PLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQ----AEGVSAIALDSLH------------LDSW----PSQAP--- 1266 (4334)
T ss_pred ecCcCChHHHHHHHHHhcCCCEEEecchhhhhccc----ccCceEEeecccc------------cccc----CCCCC---
Confidence 99999999999999999999999998765433211 1111111111100 0000 00000
Q ss_pred ccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec
Q psy8225 202 IKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR 281 (479)
Q Consensus 202 ~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 281 (479)
.....++++++++|||||||.||||+++|+++...+......+++..++++++..|++|..+. ..++.++..|+++++.
T Consensus 1267 ~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~-~~~~~~L~~G~~l~i~ 1345 (4334)
T PRK05691 1267 GLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSV-WECFWPLITGCRLVLA 1345 (4334)
T ss_pred CCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHH-HHHHHHHhCCCEEEEc
Confidence 023456889999999999999999999999999988888888899999999999999998875 6788899999999997
Q ss_pred C---CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 282 S---KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 282 ~---~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
+ ..++..+++.++++++|++.++|++++.|.+.... ..+++||.++ |+++++++.++|.+.++..++++.||+
T Consensus 1346 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~--~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 1423 (4334)
T PRK05691 1346 GPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLA--AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGP 1423 (4334)
T ss_pred CccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCccc--ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCc
Confidence 5 36889999999999999999999999998865432 2567899876 899999999999998865599999999
Q ss_pred cccCcccccC-----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccc
Q psy8225 357 TEGNANLMNA-----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFN 431 (479)
Q Consensus 357 tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~ 431 (479)
||++..++.. +....++|+|++ ++++.++|++ ++ +|+.|+.|||+++ |+ +++.
T Consensus 1424 TE~~~~~~~~~~~~~~~~~~~iG~p~~------~~~~~i~d~~-~~----------~vp~G~~GEL~i~----G~-~v~~ 1481 (4334)
T PRK05691 1424 TETAINVTHWQCQAEDGERSPIGRPLG------NVLCRVLDAE-LN----------LLPPGVAGELCIG----GA-GLAR 1481 (4334)
T ss_pred ChheeeeeeeecccccCCCCcccceeC------CCEEEEECCC-CC----------CCCCCCceEEEec----Cc-ccch
Confidence 9998655421 223345565544 7899999854 44 6789999999998 88 9999
Q ss_pred cccCcchhHHHHH-hhhcc-CCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 432 GYADKKASEKKIL-RNVYS-HGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 432 gY~~~~~~~~~~~-~~~~~-~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||+|+++.+.+.| .+++. ++.+||+|||+|++++||+++|+||+||+|
T Consensus 1482 GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qi 1531 (4334)
T PRK05691 1482 GYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQV 1531 (4334)
T ss_pred hhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEE
Confidence 9999987776654 33333 245799999999999999999999999985
No 109
>KOG1175|consensus
Probab=100.00 E-value=4.7e-48 Score=377.18 Aligned_cols=397 Identities=24% Similarity=0.299 Sum_probs=317.7
Q ss_pred hHHHHHHHhhcC-CCccccEEE---------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcC
Q psy8225 49 ARPLFVRTIREV-PMTGAYKYT---------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIG 117 (479)
Q Consensus 49 l~~~l~~~~~~~-p~~~a~~~~---------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G 117 (479)
-+.+++++.+.. ++++++++. +|| |+.+++.++|..|.+.|+++||+|++++|+.+|++++++||.++|
T Consensus 66 ~~n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~G 145 (626)
T KOG1175|consen 66 CYNCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIG 145 (626)
T ss_pred hHhhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcC
Confidence 356777775554 899999998 799 999999999999998899999999999999999999999999999
Q ss_pred ceeeeecCCcchHHHHHHHHhccceEEEeChhhHH---------HHHHhhccCCc-----ce-EEecCCCCCCCccCCCc
Q psy8225 118 VVAAFINTNQRQHILIHSIKVAECKAIIYGAELSE---------ALTEVKDSIPG-----IS-LYAAGTRRKPQAKVLPS 182 (479)
Q Consensus 118 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~ 182 (479)
++..++...++++++...++.+++++|++.+.... ...++....+. .. +++.... .
T Consensus 146 ai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~---------~ 216 (626)
T KOG1175|consen 146 AIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN---------R 216 (626)
T ss_pred eEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc---------c
Confidence 99999999999999999999999999999753221 12222211110 01 1111110 1
Q ss_pred cccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHH-HHHhhhhhhhcCCCCCCeEEEeccchhh
Q psy8225 183 TTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRA-MFMAISGRYQTGLTSDDVVYTTLPLYHT 261 (479)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l-~~~~~~~~~~~~~~~~d~~~~~~pl~h~ 261 (479)
...+++.+.......+ ....+.+++.+|+|||||||.||++.+++... +..+......++++++|++++.....++
T Consensus 217 d~~~~~~~~~a~~~~~---~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi 293 (626)
T KOG1175|consen 217 DLFWSLELKKASPEHP---CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWI 293 (626)
T ss_pred cccHHHHhhhcCCCCC---ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCee
Confidence 2234444333333322 25678899999999999999999999999765 4556666778899999999999999999
Q ss_pred hhhHHHHHHHHhcCceEEecC--CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCC--CCceeEEE--ecCCCh
Q psy8225 262 AGGLLGIGQCLLGGSTVVIRS--KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDT--QHSVKMMI--GNGLRP 335 (479)
Q Consensus 262 ~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~--l~~lr~~~--G~~l~~ 335 (479)
.|.++.++.++..|+++++.+ ++++..+++.+.+|++|.++..|+.++.|.+........ .++||++. ||++.+
T Consensus 294 ~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~ 373 (626)
T KOG1175|consen 294 TGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINP 373 (626)
T ss_pred eccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCc
Confidence 999888999999999999876 459999999999999999999999999887776554333 36799987 999999
Q ss_pred hhHHHHHHHhCcceeeeeccccccCccccc-C----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCcccccc
Q psy8225 336 QVWEPFQKRFGLDRICEFYGATEGNANLMN-A----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCK 410 (479)
Q Consensus 336 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~-~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~ 410 (479)
+..+++.+.++...|++.||+||+|+.+.. . +.++++.+.|.+ +..+.|+|+ +|+.+ +
T Consensus 374 ~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~------g~~v~i~de-~g~~~----------~ 436 (626)
T KOG1175|consen 374 EAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFP------GYDVQILDE-NGNEL----------P 436 (626)
T ss_pred chHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCC------CcceEEECC-CCCCc----------C
Confidence 999999999998569999999999976643 1 356677777655 799999997 56644 3
Q ss_pred CC-CCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 411 AE-EPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 411 ~~-~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.+ +.|+|+++.. -|.+.+++||++++ ++.+.+|.+..|+|.|||.|++|+||++|++||.||++
T Consensus 437 ~~~~~G~l~~~~~--~P~~~~r~~~~n~e---rf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDvi 501 (626)
T KOG1175|consen 437 PSTGNGELRLKPP--WPPGMFRTLWGNHE---RFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVI 501 (626)
T ss_pred CCCceeEEEEeCC--CCccccccccCCHH---HhhhhhcccCCceEEecCceEEcCCceEEEEecccccc
Confidence 33 6899998832 23378999999987 45567788889999999999999999999999999985
No 110
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.9e-47 Score=385.07 Aligned_cols=385 Identities=24% Similarity=0.299 Sum_probs=298.3
Q ss_pred HHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCc
Q psy8225 54 VRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQ 127 (479)
Q Consensus 54 ~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~ 127 (479)
..+++++|+++|+++. +|| ||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++++++..
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~ 83 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHL 83 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccccc
Confidence 4677889999999873 999 9999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCC
Q psy8225 128 RQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNK 206 (479)
Q Consensus 128 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (479)
+.+++.++++.++++.++++......+.++....+... .+....... ......+++....... . ....
T Consensus 84 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~--~~~~ 152 (511)
T PRK13391 84 TPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGE-----LEGFVGYAEAVAGLPA----T--PIAD 152 (511)
T ss_pred CHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCC-----CcccccHHHHhcCCCC----C--CCCC
Confidence 99999999999999999999877665555544444322 222221110 0011112222211110 0 1123
Q ss_pred CCCcEEEEEccCCCCCcceEEee--hHHHHH---HhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec
Q psy8225 207 PSDKLAYIYTSGTTGLPKAAVMT--HVRAMF---MAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR 281 (479)
Q Consensus 207 ~~~~~~i~~TSGTTG~pK~v~~s--~~~l~~---~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 281 (479)
.++.+.++|||||||.||+|+++ |.++.. ........+++..++++++.+|++|.+++. ..+.++..|+++++.
T Consensus 153 ~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g~~~~~~ 231 (511)
T PRK13391 153 ESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQR-AVMLVIRLGGTVIVM 231 (511)
T ss_pred cccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHH-HHHHHHHcCceEEEC
Confidence 44678899999999999999964 555432 223344556678899999999999998874 456688899999999
Q ss_pred CCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeecccc
Q psy8225 282 SKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGAT 357 (479)
Q Consensus 282 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~t 357 (479)
+.+++..+++.++++++|++.++|+++..+.+.... ....++++|.++ |+++++++.+++++.+|. .+++.||+|
T Consensus 232 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~-~v~~~YG~t 310 (511)
T PRK13391 232 EHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGP-IIHEYYAAT 310 (511)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCC-ceeeeeccc
Confidence 889999999999999999999999999888765432 223477899877 888999999999999997 899999999
Q ss_pred ccCcccccC----CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccc
Q psy8225 358 EGNANLMNA----DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGY 433 (479)
Q Consensus 358 E~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY 433 (479)
|++.++... ...++++|+|.+ + .++++|++ ++ +++.|+.|||+++ |+ ++.||
T Consensus 311 E~~~~~~~~~~~~~~~~~~vG~~~~------g-~~~i~d~~-~~----------~~~~g~~Gel~~~----g~--~~~gy 366 (511)
T PRK13391 311 EGLGFTACDSEEWLAHPGTVGRAMF------G-DLHILDDD-GA----------ELPPGEPGTIWFE----GG--RPFEY 366 (511)
T ss_pred cccceEEecCccccccCCCcCCccc------c-eEEEECCC-CC----------CCCCCCceEEEEe----cC--cceEE
Confidence 998654321 234567777665 4 46777743 44 4578899999998 66 56799
Q ss_pred cCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 434 ADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+++++.+...+. .+++||+|||+|++|+||.+++.||.||++
T Consensus 367 ~~~~~~~~~~~~----~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i 408 (511)
T PRK13391 367 LNDPAKTAEARH----PDGTWSTVGDIGYVDEDGYLYLTDRAAFMI 408 (511)
T ss_pred cCChhHhHHhhc----cCCCEEecCCEEEECCCccEEEeccCCCEE
Confidence 998877765543 225999999999999999999999999974
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.3e-47 Score=382.77 Aligned_cols=368 Identities=23% Similarity=0.291 Sum_probs=288.9
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+|| ||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.+++++++++.
T Consensus 12 ~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~~ 91 (502)
T PRK08276 12 VTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVSA 91 (502)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEcc
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhHHHHHHhhccCC-cceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEE
Q psy8225 149 ELSEALTEVKDSIP-GISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAV 227 (479)
Q Consensus 149 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~ 227 (479)
.....+.+..+..+ .+..+.+..... .....+++....... . .....++.++++|||||||.||+|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~-----~~~~~~~~a~i~~TSGtTG~PK~v~ 159 (502)
T PRK08276 92 ALADTAAELAAELPAGVPLLLVVAGPV------PGFRSYEEALAAQPD-T-----PIADETAGADMLYSSGTTGRPKGIK 159 (502)
T ss_pred chhhHHHHHhhhccccccEEEEeCCCC------CccccHHHHHhcCCC-C-----CCCCCCcceEEEECCCCCCCCceEE
Confidence 77666655544443 333332221110 112223332221111 0 1234567899999999999999999
Q ss_pred eehHHHHHHh------hhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEE
Q psy8225 228 MTHVRAMFMA------ISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 228 ~s~~~l~~~~------~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~ 301 (479)
++|.++.... ...........++++++.+|++|.+++... +.++..|+++++.+.+++..+++.++++++|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~ 238 (502)
T PRK08276 160 RPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFG-MSALALGGTVVVMEKFDAEEALALIERYRVTHS 238 (502)
T ss_pred EccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHH-HHHHhccceEEEcCCCCHHHHHHHHHHhCCeEE
Confidence 9987654322 111112223467899999999999987554 468889999999988999999999999999999
Q ss_pred EEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCccccc-C---CCCCCcc
Q psy8225 302 QYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMN-A---DGKVGAV 373 (479)
Q Consensus 302 ~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~-~---~~~~~~~ 373 (479)
.++|+++..+.+.... ...+++++|.++ |++++.++.+++.+.++. .+++.||+||++.++.. . ...++++
T Consensus 239 ~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~-~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 317 (502)
T PRK08276 239 QLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGP-IIHEYYASSEGGGVTVITSEDWLAHPGSV 317 (502)
T ss_pred EehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCc-HhhhhcccccccceeEecCccccccCCCc
Confidence 9999999999877543 234578999877 889999999999999987 89999999999874432 1 2344566
Q ss_pred cccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCc
Q psy8225 374 GYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDA 453 (479)
Q Consensus 374 g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g 453 (479)
|+|+ ++.++++|++ +. +++.|+.|||+++ |+ .++.||+++++.+...+. .+|
T Consensus 318 G~~~-------~~~~~i~d~~-~~----------~~~~g~~Gel~v~----~~-~~~~gy~~~~~~~~~~~~-----~~~ 369 (502)
T PRK08276 318 GKAV-------LGEVRILDED-GN----------ELPPGEIGTVYFE----MD-GYPFEYHNDPEKTAAARN-----PHG 369 (502)
T ss_pred ceec-------ccEEEEECCC-CC----------CCcCCCceEEEEE----CC-CccchhcCCHHHHHHHhc-----CCC
Confidence 6644 3678888854 44 5688999999998 77 788999999887776554 259
Q ss_pred EEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 454 AFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 454 ~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
||+|||+|++|+||++++.||.||++
T Consensus 370 ~~~TGD~~~~~~~g~~~~~GR~~~~i 395 (502)
T PRK08276 370 WVTVGDVGYLDEDGYLYLTDRKSDMI 395 (502)
T ss_pred ceeecceEEEcCCcCEEEeccCcceE
Confidence 99999999999999999999999874
No 112
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.2e-47 Score=388.61 Aligned_cols=380 Identities=19% Similarity=0.171 Sum_probs=293.2
Q ss_pred hhHHHHHHHhhcCCCccccEEE-----Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 48 YARPLFVRTIREVPMTGAYKYT-----VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 48 ~l~~~l~~~~~~~p~~~a~~~~-----~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
++.+.|...+..+|+++++... +|| ||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 3667788889999999988665 999 9999999999999999999999999999999999999999999999999
Q ss_pred eecCCcchHHH-------HHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCC
Q psy8225 122 FINTNQRQHIL-------IHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVS 194 (479)
Q Consensus 122 ~l~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (479)
++++..+.+++ .++++.++++.+++++........... . ... ...++++.....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~-~~~-----------------~~~~~~l~~~~~ 143 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEE-K-GIR-----------------VLTVADLLAADP 143 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcc-c-CCc-----------------eeehhhhcccCC
Confidence 99988776544 556788899999998765433322111 0 111 112233322111
Q ss_pred CCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCC-CeEEEeccchhhhhhHHHHHHHHh
Q psy8225 195 AKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSD-DVVYTTLPLYHTAGGLLGIGQCLL 273 (479)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~-d~~~~~~pl~h~~g~~~~~~~~l~ 273 (479)
. . ......+++++++|||||||.||+|+++|+++...+......+++..+ |++++.+|++|.+|++..+..++.
T Consensus 144 ~-~----~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~ 218 (545)
T PRK07768 144 I-D----PVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMY 218 (545)
T ss_pred C-C----cCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHH
Confidence 1 0 123456889999999999999999999999999888777777777776 899999999999998777778899
Q ss_pred cCceEEecCC----CChhHHHHHHHHhcccEEEEehHHHHHHhcCC----CCCCCCCCceeEEE--ecCCChhhHHHHHH
Q psy8225 274 GGSTVVIRSK----FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVP----EKPEDTQHSVKMMI--GNGLRPQVWEPFQK 343 (479)
Q Consensus 274 ~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~----~~~~~~l~~lr~~~--G~~l~~~~~~~~~~ 343 (479)
.|+++++.+. .++..+++.+++++++++...|..+..+.+.. .....+++++|.++ |+++++++.+++.+
T Consensus 219 ~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~ 298 (545)
T PRK07768 219 FGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLD 298 (545)
T ss_pred CCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHH
Confidence 9999888753 26778899999999999877777666554322 11234578899877 88999999999987
Q ss_pred H---hCcc--eeeeeccccccCcccccCC-----------------------------CCCCcccccCccccCCCceeeE
Q psy8225 344 R---FGLD--RICEFYGATEGNANLMNAD-----------------------------GKVGAVGYIPYIAIPFYPVGLI 389 (479)
Q Consensus 344 ~---~~~~--~v~~~YG~tE~~~~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~ 389 (479)
. ++.. .+++.||+||++..+.... ..++++|+|++ +++++
T Consensus 299 ~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~------g~~~~ 372 (545)
T PRK07768 299 AGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLP------GLEVR 372 (545)
T ss_pred HHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCC------CCEEE
Confidence 5 5542 4999999999986543211 12234555544 78899
Q ss_pred EeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcE
Q psy8225 390 KCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYF 469 (479)
Q Consensus 390 i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l 469 (479)
++|++ ++ ++++|+.|||+++ |+ .++.||++.+...... ..+|||+|||+|++|+||++
T Consensus 373 i~~~~-~~----------~~~~g~~Gel~v~----~~-~~~~gy~~~~~~~~~~------~~~g~~~TGDl~~~~~~g~l 430 (545)
T PRK07768 373 VVDED-GQ----------VLPPRGVGVIELR----GE-SVTPGYLTMDGFIPAQ------DADGWLDTGDLGYLTEEGEV 430 (545)
T ss_pred EECCC-CC----------CCCCCCEEEEEEc----cC-cccccccCCCCCcccc------cCCCeeeccceEEEecCCEE
Confidence 88844 44 5688999999998 76 8999999865543322 13789999999999999999
Q ss_pred EEecCCCCCC
Q psy8225 470 YFKDRTGDAC 479 (479)
Q Consensus 470 ~~~GR~~d~~ 479 (479)
+++||.||++
T Consensus 431 ~~~GR~~d~i 440 (545)
T PRK07768 431 VVCGRVKDVI 440 (545)
T ss_pred EEEccccceE
Confidence 9999999974
No 113
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.2e-46 Score=380.27 Aligned_cols=372 Identities=21% Similarity=0.265 Sum_probs=287.6
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+|| ||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++.++++.+++++++++.
T Consensus 12 ~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~~ 91 (509)
T PRK12406 12 RSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAHA 91 (509)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEcc
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhHHHHHHhhccCCcceEEecCCCCC---------CCccCCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCC
Q psy8225 149 ELSEALTEVKDSIPGISLYAAGTRRK---------PQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGT 219 (479)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGT 219 (479)
.....+...... .+.++....... ...........+++....... ......+++++++|||||
T Consensus 92 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~i~~TSGt 163 (509)
T PRK12406 92 DLLHGLASALPA--GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP------YDGPPVPQPQSMIYTSGT 163 (509)
T ss_pred chhhhhhhhhhc--ccceeecccccccccccccccccccCCCCccCHHHHhcccCc------cCCCCCCCceEEEECCCC
Confidence 665544332211 112221111000 000001111223322211110 023356789999999999
Q ss_pred CCCcceEEeehHHHH---HHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHh
Q psy8225 220 TGLPKAAVMTHVRAM---FMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKY 296 (479)
Q Consensus 220 TG~pK~v~~s~~~l~---~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~ 296 (479)
||.||+|+++|.+.. .........+++..++++++.+|++|..+..+.+ .++..|+++++.+.+++..+++.++++
T Consensus 164 TG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~l~~~ 242 (509)
T PRK12406 164 TGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGL-RAGRLGGVLVLQPRFDPEELLQLIERH 242 (509)
T ss_pred CCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHH-HHHhhheEEEEccCCCHHHHHHHHHHc
Confidence 999999999775543 3333344567788999999999999998865544 467789999998888999999999999
Q ss_pred cccEEEEehHHHHHHhcCCCC--CCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccCC----C
Q psy8225 297 NCTVAQYIGEMCRYLLAVPEK--PEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNAD----G 368 (479)
Q Consensus 297 ~~t~~~~~p~~l~~l~~~~~~--~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~----~ 368 (479)
++|++..+|++++.|++.... ...+++++|.++ |+++++++.+++.+.++. .+++.||+||++.++.... .
T Consensus 243 ~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~-~~~~~YG~tE~~~~~~~~~~~~~~ 321 (509)
T PRK12406 243 RITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGP-VIYEYYGSTESGAVTFATSEDALS 321 (509)
T ss_pred CCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCC-cEEeeccccccCceEecCcccccc
Confidence 999999999999998875432 234568899877 788999999999999998 8999999999987654322 3
Q ss_pred CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccc-cccCcchhHHHHHhhh
Q psy8225 369 KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFN-GYADKKASEKKILRNV 447 (479)
Q Consensus 369 ~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~-gY~~~~~~~~~~~~~~ 447 (479)
.++++|.+.+ ++.++++|+. ++ +++.|+.|||+++ ++ .++. +|+++++.++..+
T Consensus 322 ~~~~~G~~~~------~~~~~i~d~~-~~----------~~~~g~~Gel~v~----~~-~~~~~~y~~~~~~~~~~~--- 376 (509)
T PRK12406 322 HPGTVGKAAP------GAELRFVDED-GR----------PLPQGEIGEIYSR----IA-GNPDFTYHNKPEKRAEID--- 376 (509)
T ss_pred cCCCcCccCC------CcEEEEECCC-CC----------CCCCCCceEEEEE----CC-ccccccccCCchhccccc---
Confidence 4567777665 7889988854 44 5688999999998 66 5544 8998887766543
Q ss_pred ccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 448 YSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 448 ~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.+|||+|||+|++|+||++++.||.||++
T Consensus 377 ---~~~~~~TGD~~~~~~~g~~~~~GR~~d~i 405 (509)
T PRK12406 377 ---RGGFITSGDVGYLDADGYLFLCDRKRDMV 405 (509)
T ss_pred ---CCCCeEEccEEEEcCCceEEEeecccceE
Confidence 27899999999999999999999999974
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4e-47 Score=377.69 Aligned_cols=322 Identities=15% Similarity=0.130 Sum_probs=256.1
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGL-QRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
|.| ||.+++.++|++|++.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++++++++++++
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 899 999999999999999988 579999999999999999999999999999999999999999999999999999987
Q ss_pred hhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEE
Q psy8225 148 AELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAV 227 (479)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~ 227 (479)
.+..... .. . .. .. . ....+++.++++|||||||.||+|+
T Consensus 100 ~~~~~~~--------------~~-----------------~-~~---~~-~----~~~~~~~~~~i~~TSGTTG~PKgV~ 139 (452)
T PRK07445 100 DQLKLSH--------------PP-----------------P-LP---SQ-G----ILPNLETGWIMIPTGGSSGQIRFAI 139 (452)
T ss_pred Ccccccc--------------CC-----------------C-CC---cc-c----cCCCCCCcEEEEeCCCCCCCCcEEE
Confidence 5432100 00 0 00 00 0 1124578999999999999999999
Q ss_pred eehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHH
Q psy8225 228 MTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEM 307 (479)
Q Consensus 228 ~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~ 307 (479)
+||+++...+......+++.+ ++.++.+|++|.+|+ ..++.++..|+++++.+............+++++++.++|++
T Consensus 140 ~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~ 217 (452)
T PRK07445 140 HTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQ 217 (452)
T ss_pred echHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHH
Confidence 999999888777766666654 467889999999997 456778999999998774333333334457889999999999
Q ss_pred HHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccC-C----CCCCcccccCccc
Q psy8225 308 CRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNA-D----GKVGAVGYIPYIA 380 (479)
Q Consensus 308 l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~-~----~~~~~~g~~~~~~ 380 (479)
++.+.+.. ...+++||.++ |+++++++.+.+.+ ++. ++++.||+||++..+... + ..++++|+|.|
T Consensus 218 l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~-~~~-~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p-- 290 (452)
T PRK07445 218 LQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQ-LQL-RLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLP-- 290 (452)
T ss_pred HHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHh-cCC-eEecCcchhhhcccccccCchhhccCCCcCCccCC--
Confidence 99988632 22467899877 78899999988875 577 899999999987554322 1 23456677655
Q ss_pred cCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCe
Q psy8225 381 IPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDI 460 (479)
Q Consensus 381 ~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~ 460 (479)
+++++++ .|+.|||+++ |+ .++.||+++... .+|||+|||+
T Consensus 291 ----~~~v~i~-------------------~g~~Gel~v~----g~-~~~~gY~~~~~~-----------~~g~~~TGDl 331 (452)
T PRK07445 291 ----HAQITIP-------------------ANQTGNITIQ----AQ-SLALGYYPQILD-----------SQGIFETDDL 331 (452)
T ss_pred ----CCeEEEc-------------------CCCcceEEEe----CC-ccchhhcCCccC-----------CCCEEECCCE
Confidence 6777765 1357999998 77 899999985421 2789999999
Q ss_pred eEEecCCcEEEecCCCCCC
Q psy8225 461 LIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 461 g~~d~dG~l~~~GR~~d~~ 479 (479)
|++|+||+++|.||.||++
T Consensus 332 ~~~d~dG~l~~~GR~dd~I 350 (452)
T PRK07445 332 GYLDAQGYLHILGRNSQKI 350 (452)
T ss_pred EEEcCCCCEEEEeecCCEE
Confidence 9999999999999999974
No 115
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=6.1e-47 Score=382.36 Aligned_cols=355 Identities=15% Similarity=0.133 Sum_probs=254.2
Q ss_pred cCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh------HHHHHHhhccCCcceEEecCCCC
Q psy8225 100 MEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL------SEALTEVKDSIPGISLYAAGTRR 173 (479)
Q Consensus 100 ~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 173 (479)
++|++|+++++|||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.++....+...+++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999997642 12222222212211222211110
Q ss_pred CCCccCCCccccccccCCcCCC----CCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCC
Q psy8225 174 KPQAKVLPSTTLLDEELPEVSA----KSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSD 249 (479)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~ 249 (479)
............+++++..... ...........++++++|+|||||||.||||++||++++.++......+++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 0000000011233333311110 000000012345889999999999999999999999988766655556778889
Q ss_pred CeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCC--CCCCCCCcee
Q psy8225 250 DVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPE--KPEDTQHSVK 326 (479)
Q Consensus 250 d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~--~~~~~l~~lr 326 (479)
|++++.+|++|..|+ ..++.++..|+++++.+ .+++..+++.|+++++|++.++|+++..|++... ....++++||
T Consensus 161 d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr 239 (499)
T PLN03051 161 DVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLR 239 (499)
T ss_pred CEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhhe
Confidence 999999999999986 56778899999999887 4788999999999999999999999999887643 2334678999
Q ss_pred EEE--ecCCChhhHHHHHHHh--CcceeeeeccccccCcccc-cC---CCCCCcccccCccccCCCceeeEEeCCCCCCc
Q psy8225 327 MMI--GNGLRPQVWEPFQKRF--GLDRICEFYGATEGNANLM-NA---DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEP 398 (479)
Q Consensus 327 ~~~--G~~l~~~~~~~~~~~~--~~~~v~~~YG~tE~~~~~~-~~---~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~ 398 (479)
.++ |+++++++.+++++.+ +. .+++.||+||++..+. .. ..+++++|+|.+ +++++|+|++ ++
T Consensus 240 ~i~~gG~~~~~~~~~~~~~~~~~~~-~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~------~~~~~ivd~~-g~- 310 (499)
T PLN03051 240 VFASTGEASAVDDVLWLSSVRGYYK-PVIEYCGGTELASGYISSTLLQPQAPGAFSTASL------GTRFVLLNDN-GV- 310 (499)
T ss_pred EEEecCCCCCHHHHHHHHHhccccc-eeEeeeccccccceeecccccCCCCCccccCCCC------CceEEEECCC-CC-
Confidence 876 7899999998887743 35 8999999999864332 11 234567777665 7899999854 44
Q ss_pred cccCCCccccccCC--CCceEEEEeecCCcccc--cccccCcchhHHHHHhh-hc--cCCCcEEEcCCeeEEecCCcEEE
Q psy8225 399 IRNKDGLCIPCKAE--EPGILIGMIKESRAESH--FNGYADKKASEKKILRN-VY--SHGDAAFNTGDILIKDKFQYFYF 471 (479)
Q Consensus 399 i~~~~g~~~~~~~~--~~Gel~v~~~~~~~~~~--~~gY~~~~~~~~~~~~~-~~--~~~~g~~~TGD~g~~d~dG~l~~ 471 (479)
+++.| +.|||+++ || .+ +.||+|++. ++.+++. .+ ..+.+||+|||+|++|+||+|+|
T Consensus 311 ---------~~~~g~~~~Gel~v~----g~-~~~~~~gy~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~ 375 (499)
T PLN03051 311 ---------PYPDDQPCVGEVALA----PP-MLGASDRLLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCV 375 (499)
T ss_pred ---------CCCCCCCcceEEEEe----cC-cCCCCccccCCcc-cceeeecCCccccCCcceeecCCeEEECCCCcEEE
Confidence 45666 58999998 77 44 689998653 3322210 00 01234899999999999999999
Q ss_pred ecCCCCCC
Q psy8225 472 KDRTGDAC 479 (479)
Q Consensus 472 ~GR~~d~~ 479 (479)
+||+||++
T Consensus 376 ~gR~~d~i 383 (499)
T PLN03051 376 QGRADDTM 383 (499)
T ss_pred EeccCCEE
Confidence 99999985
No 116
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.7e-46 Score=372.01 Aligned_cols=341 Identities=22% Similarity=0.212 Sum_probs=274.8
Q ss_pred HHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcch
Q psy8225 54 VRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQ 129 (479)
Q Consensus 54 ~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~ 129 (479)
..+++.+|+++|+.+. +|| ||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.
T Consensus 10 ~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~ 89 (458)
T PRK09029 10 RHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQLPQ 89 (458)
T ss_pred HHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCCCH
Confidence 4557899999999876 999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCCCCC
Q psy8225 130 HILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSD 209 (479)
Q Consensus 130 ~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (479)
+++.++++++++++++++.+... +.. ..... +.. ..... .....+++
T Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~-~~~----~~~~~--------------------~~~----~~~~~----~~~~~~~~ 136 (458)
T PRK09029 90 PLLEELLPSLTLDFALVLEGENT-FSA----LTSLH--------------------LQL----VEGAH----AVAWQPQR 136 (458)
T ss_pred HHHHHHHHhcCCCEEEEcCcccc-hhh----ccccc--------------------ccc----ccccC----cccCCCCC
Confidence 99999999999999999765422 100 00000 000 00000 02335688
Q ss_pred cEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHH
Q psy8225 210 KLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNF 289 (479)
Q Consensus 210 ~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~ 289 (479)
+++++|||||||.||+|.+||+++...+......++...+++++..+|++|.+|+ ..++.++..|+++++.+. ..+
T Consensus 137 ~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~-~~~~~~l~~G~~v~~~~~---~~~ 212 (458)
T PRK09029 137 LATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQ-GIVWRWLYAGATLVVRDK---QPL 212 (458)
T ss_pred eEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhh-HHHHHHHhCCceEEeCCh---HHH
Confidence 8999999999999999999999999988887778888999999999999999997 455678899999998774 456
Q ss_pred HHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccC-
Q psy8225 290 WKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNA- 366 (479)
Q Consensus 290 ~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~- 366 (479)
++.+ .+++.+..+|+++..+...... ..++|.++ |+++++++.+++.+ ++. ++++.||+||++......
T Consensus 213 ~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~-~g~-~~~~~YG~tE~~~~~~~~~ 284 (458)
T PRK09029 213 EQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQ-QGI-RCWCGYGLTEMASTVCAKR 284 (458)
T ss_pred HHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHH-cCC-cEeccccccccCcceeccC
Confidence 6666 4789999999999988876443 34688776 78899999998875 587 899999999998654322
Q ss_pred CCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhh
Q psy8225 367 DGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRN 446 (479)
Q Consensus 367 ~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~ 446 (479)
.....++|+|++ ++.+++++ |||+++ |+ .++.||+++++.+...
T Consensus 285 ~~~~~~~G~~~~------~~~~~i~~----------------------gel~v~----g~-~~~~gY~~~~~~~~~~--- 328 (458)
T PRK09029 285 ADGLAGVGSPLP------GREVKLVD----------------------GEIWLR----GA-SLALGYWRQGQLVPLV--- 328 (458)
T ss_pred CCCCCCCCCCCC------CCEEEEeC----------------------CEEEEe----cC-ceeeeeecCccccccc---
Confidence 222345777655 67776543 789988 77 8999999887655322
Q ss_pred hccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 447 VYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 447 ~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
.++|||+|||+|++| ||++++.||+||++
T Consensus 329 ---~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i 357 (458)
T PRK09029 329 ---NDEGWFATRDRGEWQ-NGELTILGRLDNLF 357 (458)
T ss_pred ---cCCCccCCCCcEEEe-CCEEEEecccccce
Confidence 247999999999999 99999999999985
No 117
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=9.4e-46 Score=368.53 Aligned_cols=339 Identities=22% Similarity=0.255 Sum_probs=272.4
Q ss_pred eh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 71 TF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 71 Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
|| ||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 79 99999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred hHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEee
Q psy8225 150 LSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMT 229 (479)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s 229 (479)
..... .... .+............ .......+++++++|||||||.||+|.++
T Consensus 81 ~~~~~---------~~~~-----------------~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~TSGtTG~PK~v~~s 132 (436)
T TIGR01923 81 LEEKD---------FQAD-----------------SLDRIEAAGRYETS--LSASFNMDQIATLMFTSGTTGKPKAVPHT 132 (436)
T ss_pred ccccc---------eeec-----------------chHhhhhccccccc--ccccCCcCceEEEEeCCCCCCCCcEEEEe
Confidence 32100 0000 00000000000000 01234567899999999999999999999
Q ss_pred hHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHH
Q psy8225 230 HVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCR 309 (479)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~ 309 (479)
|+++...+......++++++|++++.+|++|.+++ ..++.++..|+++++.+.++ .+++.+.++++|++..+|+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~~~~~P~~l~ 209 (436)
T TIGR01923 133 FRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDKFN--QLLEMIANERVTHISLVPTQLN 209 (436)
T ss_pred hHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecchHH--HHHHHHHHhCCeEEEeHHHHHH
Confidence 99999888888888899999999999999999887 56778899999999987654 8999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccCCC----CCCcccccCccccCC
Q psy8225 310 YLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNADG----KVGAVGYIPYIAIPF 383 (479)
Q Consensus 310 ~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~----~~~~~g~~~~~~~~~ 383 (479)
.|.+..... +++|.++ |+++++++.+++++ ++. .+++.||+||++..+..... ...++|.|++
T Consensus 210 ~l~~~~~~~----~~l~~~~~~G~~~~~~~~~~~~~-~~~-~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~----- 278 (436)
T TIGR01923 210 RLLDEGGHN----ENLRKILLGGSAIPAPLIEEAQQ-YGL-PIYLSYGMTETCSQVTTATPEMLHARPDVGRPLA----- 278 (436)
T ss_pred HHHhCcCCC----CceEEEEECCCCCCHHHHHHHHH-hCC-ceeeEecCCccchhccCcCccccccccCCCccCC-----
Confidence 998865432 6788776 89999999988875 588 89999999999876543221 1113566554
Q ss_pred CceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEE
Q psy8225 384 YPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIK 463 (479)
Q Consensus 384 ~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~ 463 (479)
++++++.+.+ .++.|||+++ ++ .++.||++++..+...+. +|||+|||+|++
T Consensus 279 -~~~~~i~~~~----------------~~~~Gel~v~----~~-~~~~gy~~~~~~~~~~~~------~~~~~TGD~~~~ 330 (436)
T TIGR01923 279 -GREIKIKVDN----------------KEGHGEIMVK----GA-NLMKGYLYQGELTPAFEQ------QGWFNTGDIGEL 330 (436)
T ss_pred -CcEEEEEeCC----------------CCCceEEEEE----CC-ccchhhCCChhhhhhhhc------CCCeeccceEEE
Confidence 6777763322 1257999998 77 899999998776655432 789999999999
Q ss_pred ecCCcEEEecCCCCCC
Q psy8225 464 DKFQYFYFKDRTGDAC 479 (479)
Q Consensus 464 d~dG~l~~~GR~~d~~ 479 (479)
|+||++++.||.||++
T Consensus 331 ~~dg~~~~~GR~~d~i 346 (436)
T TIGR01923 331 DGEGFLYVLGRRDDLI 346 (436)
T ss_pred cCCCCEEEeccccCeE
Confidence 9999999999999974
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-44 Score=354.95 Aligned_cols=305 Identities=16% Similarity=0.138 Sum_probs=257.9
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+|| ||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+++..+++++++++++++.
T Consensus 9 ~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (414)
T PRK08308 9 YSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYGE 87 (414)
T ss_pred ecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEecC
Confidence 999 99999999999985 6899999999999999999999999999999999999999999999999999999999865
Q ss_pred hhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEe
Q psy8225 149 ELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVM 228 (479)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~ 228 (479)
.... . ... ....++++++++|||||||.||+|++
T Consensus 88 ~~~~------------------------------~---~~~-------------~~~~~~~~~~i~~TSGtTG~PKgv~~ 121 (414)
T PRK08308 88 SDFT------------------------------K---LEA-------------VNYLAEEPSLLQYSSGTTGEPKLIRR 121 (414)
T ss_pred cccc------------------------------c---ccC-------------CCCCCCCceEEEECCCCCCCCcEEEE
Confidence 2100 0 000 11245788999999999999999999
Q ss_pred ehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHH
Q psy8225 229 THVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMC 308 (479)
Q Consensus 229 s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l 308 (479)
+|+++...+......+.+..+|+++..+|++|.+|++..++.++..|+++++.+.+++..+++.++++++|.+.++|+++
T Consensus 122 s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~ 201 (414)
T PRK08308 122 SWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLML 201 (414)
T ss_pred ehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHH
Confidence 99999988887777788889999999999999999888889999999999999889999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccCcccccCC-CCCCcccccCccccCCCc
Q psy8225 309 RYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNAD-GKVGAVGYIPYIAIPFYP 385 (479)
Q Consensus 309 ~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~-~~~~~~g~~~~~~~~~~~ 385 (479)
..+.+..... .+++.++ |+++++++.+++++. +. ++++.||+||++....... ..++++|+|+| +
T Consensus 202 ~~l~~~~~~~----~~l~~~~~~G~~l~~~~~~~~~~~-~~-~~~~~YG~tE~~~~~~~~~~~~~~~~G~p~~------~ 269 (414)
T PRK08308 202 HILGRLLPGT----FQFHAVMTSGTPLPEAWFYKLRER-TT-YMMQQYGCSEAGCVSICPDMKSHLDLGNPLP------H 269 (414)
T ss_pred HHHHhcCCcc----ccccEEEEccCCCCHHHHHHHHHh-CC-hhhhccCccccCCeeecCCCCCCCccCccCC------C
Confidence 9988764321 2455554 889999999999876 45 8999999999986544322 34566777665 6
Q ss_pred eeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEec
Q psy8225 386 VGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDK 465 (479)
Q Consensus 386 ~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~ 465 (479)
+++.+.+. .++.|||+++ +. ++||+|||+|++|+
T Consensus 270 ~~~~~~~~-----------------~~~~gel~v~----~~-------------------------~~~~~TGDl~~~~~ 303 (414)
T PRK08308 270 VSVSAGSD-----------------ENAPEEIVVK----MG-------------------------DKEIFTKDLGYKSE 303 (414)
T ss_pred eEEEEecC-----------------CCCCceEEEE----cC-------------------------CceEECCceEEECC
Confidence 77776542 2457999986 11 67999999999999
Q ss_pred CCcEEEecCCCCCC
Q psy8225 466 FQYFYFKDRTGDAC 479 (479)
Q Consensus 466 dG~l~~~GR~~d~~ 479 (479)
||++++.||.||++
T Consensus 304 dg~l~~~GR~~~~i 317 (414)
T PRK08308 304 RGTLHFMGRMDDVI 317 (414)
T ss_pred CccEEEecccCCeE
Confidence 99999999999974
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=4.8e-39 Score=346.22 Aligned_cols=371 Identities=9% Similarity=0.011 Sum_probs=265.7
Q ss_pred chhHHHHHHHhhcCCCccccEE-------E-Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcC
Q psy8225 47 TYARPLFVRTIREVPMTGAYKY-------T-VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIG 117 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~-------~-~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G 117 (479)
.++.++|.+.++++|+++|+.+ . +|| |+.++++++|++|.++|+++||+|+|+++|++||+++++||+++|
T Consensus 427 ~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~G 506 (1452)
T PTZ00297 427 RSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYG 506 (1452)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 6789999999999999999963 2 999 999999999999999999999999999999999999999999999
Q ss_pred ceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcce-EEecCCCCCC---C--ccCCCccccccccCC
Q psy8225 118 VVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGIS-LYAAGTRRKP---Q--AKVLPSTTLLDEELP 191 (479)
Q Consensus 118 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~--~~~~~~~~~~~~~~~ 191 (479)
++++|+++. .+++.+++++++++++|++.+....+.++... .++ +++.+..... . .........|++++.
T Consensus 507 aV~VPly~t--~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~--~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~ 582 (1452)
T PTZ00297 507 FTTLPLVGK--GSTMRTLIDEHKIKVVFADRNSVAAILTCRSR--KLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQ 582 (1452)
T ss_pred CEEEeCCCC--HHHHHHHHHhcCCcEEEEchhHHHHHHhhccc--CCcEEEEECCCcccccccccccCCcceeeHHHHHh
Confidence 999999864 67999999999999999998777666554322 333 4444321000 0 000112345777766
Q ss_pred cCCCCCCcccccCCCCCCcEEEEE---ccCCCCCcceEEeehHHHHHHhhhhhhhc---CCCCCCeEEEeccchhhhhhH
Q psy8225 192 EVSAKSPTEDIKKNKPSDKLAYIY---TSGTTGLPKAAVMTHVRAMFMAISGRYQT---GLTSDDVVYTTLPLYHTAGGL 265 (479)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~i~~---TSGTTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~~~~~pl~h~~g~~ 265 (479)
.+..... .......+++++.|+| ||||||.||||++||+|++.++....... ....+|++++.+|++|+++..
T Consensus 583 ~G~~~~~-~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~ 661 (1452)
T PTZ00297 583 KGRLCPV-PLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRV 661 (1452)
T ss_pred cCcccCc-cccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHH
Confidence 5432111 1113346788999986 99999999999999999999888765432 346789999999999999964
Q ss_pred HHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCC--------------------------C
Q psy8225 266 LGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKP--------------------------E 319 (479)
Q Consensus 266 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~--------------------------~ 319 (479)
..+.++..|+++.. +++..+++.|++++||++.++|.+++.+....... .
T Consensus 662 -~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~ 737 (1452)
T PTZ00297 662 -FVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHR 737 (1452)
T ss_pred -HHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 45667889998864 47899999999999999999999988654321100 0
Q ss_pred CC----------------CCceeEEE-ecCCChhhHHHHHHHhCcceeeeeccccccCcccccCCCCCCcccccCccccC
Q psy8225 320 DT----------------QHSVKMMI-GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLMNADGKVGAVGYIPYIAIP 382 (479)
Q Consensus 320 ~~----------------l~~lr~~~-G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~g~~~~~~~~ 382 (479)
.. -.++|+++ |+ +++....+. ..+. ++..+||+||+.. .+........|.|+|
T Consensus 738 ~~~~l~d~LVf~kir~~lGGrlr~~isGg--a~~~l~~~l-~~~i-~i~~g~glTE~~~--~~~~~~~~~~G~Plp---- 807 (1452)
T PTZ00297 738 RDSSLLRFIFFRATQELLGGCVEKIVLCV--SEESTSFSL-LEHI-SVCYVPCLREVFF--LPSEGVFCVDGTPAP---- 807 (1452)
T ss_pred CCcHHHHHHHHHHHHHHhcCCeEEEEECC--CccccChHH-hCCc-eEEEecceEEeee--ecCCCCcccCCeecC----
Confidence 00 02456555 43 112222211 2244 6778899999542 233322222366555
Q ss_pred CCceeeEEeCC-CCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCee
Q psy8225 383 FYPVGLIKCDP-ETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDIL 461 (479)
Q Consensus 383 ~~~~~~~i~d~-~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g 461 (479)
++++++.+. +.+. .+..|||+++ |+++++.|.+++ +||+
T Consensus 808 --gvEvKI~~~~E~~~-------------~~~~GEIlvr------------~~kdpe~T~e~~-------~gW~------ 847 (1452)
T PTZ00297 808 --SLQVDLEPFDEPSD-------------GAGIGQLVLA------------KKGEPRRTLPIA-------AQWK------ 847 (1452)
T ss_pred --ceEEEEcccccccC-------------CCCCCeEEEE------------ECCChHHHHHhh-------CcCc------
Confidence 899999763 2111 1235999875 457787777643 5785
Q ss_pred EEecCCcEEEecCCCCCC
Q psy8225 462 IKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 462 ~~d~dG~l~~~GR~~d~~ 479 (479)
+||+|+|.||+||+.
T Consensus 848 ---~dG~L~IidRkKdli 862 (1452)
T PTZ00297 848 ---RDRTLRLLGPPLGIL 862 (1452)
T ss_pred ---cCCeEEEEeccccce
Confidence 689999999999974
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-34 Score=300.65 Aligned_cols=384 Identities=20% Similarity=0.225 Sum_probs=299.0
Q ss_pred chhHHHHHHHhhcCCCccccEEE---Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
.++.++|...+...|++.|+.+. +|| ++..+++++|..|.+.|+.++++|+++.+.+++++++++|++++|+.++|
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP 306 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVP 306 (642)
T ss_pred chHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEec
Confidence 56899999999999999999995 999 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCCCCCCCccCCCccccccccCCcCCCCCCcccc
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGTRRKPQAKVLPSTTLLDEELPEVSAKSPTEDI 202 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (479)
++|..+.+.+.++++.++++.+++......... ..+. + ..+..........+. .
T Consensus 307 ~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~----~~~~---~-----------------~~~~~~~~~~~~~~~--~ 360 (642)
T COG1020 307 LDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV----GLPG---L-----------------ALDDALSEIPDTDPI--P 360 (642)
T ss_pred CCCCChHHHHHHHHhhcCccEEEeccccccccc----cCCc---c-----------------ccccccccCCccCcc--c
Confidence 999999999999999999999999732211100 0000 0 000100000000000 0
Q ss_pred cCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 203 KKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 203 ~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
....+++.++++|||||||.||||+.+|+++.....+....+.+..+|+++...++.+..+ ...++.++..|+++++.+
T Consensus 361 ~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~-~~~~f~~l~~G~~l~~~~ 439 (642)
T COG1020 361 QALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDAS-VFEIFGALLEGARLVLAP 439 (642)
T ss_pred ccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchh-HHHHHHHHhCCCEEEecC
Confidence 2335578999999999999999999999999987777777788999999999999866655 477889999999999877
Q ss_pred C---CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCC--CCCceeEEE--ecCCChhhHHHHHHHhC-cceeeeec
Q psy8225 283 K---FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPED--TQHSVKMMI--GNGLRPQVWEPFQKRFG-LDRICEFY 354 (479)
Q Consensus 283 ~---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~--~l~~lr~~~--G~~l~~~~~~~~~~~~~-~~~v~~~Y 354 (479)
. .++..+.+.+.++++|++..+|..+..+......... ....+|.+. |+.++.++...+..... ...+.+.|
T Consensus 440 ~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~y 519 (642)
T COG1020 440 ALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLY 519 (642)
T ss_pred ccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeecc
Confidence 4 5788999999999999999999999988876322221 223477765 78899999998887764 23899999
Q ss_pred cccccCcccccCCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCccccccccc
Q psy8225 355 GATEGNANLMNADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYA 434 (479)
Q Consensus 355 G~tE~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~ 434 (479)
|.||+...+..........+ ..|.+.+..+.++.++| +... +++.|..||+++. |. ++..||+
T Consensus 520 gpTe~~~~~~~~~~~~~~~~-~~piG~p~~n~~~~ild-~~~~----------~~p~gv~gel~i~----g~-~~a~gy~ 582 (642)
T COG1020 520 GPTEATLDAPSFPISAELES-RVPIGRPVANTQLYILD-QGLR----------PLPLGVPGELYIA----GL-GLALGYL 582 (642)
T ss_pred CccHHhhheeeEEcccccCC-CCCcceeeCCCeEEEEC-CCCC----------cCCCCCCeeeEEC----Cc-chhhhhc
Confidence 99996554432221111111 23344455588999998 3333 6789999999997 55 8999999
Q ss_pred CcchhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 435 DKKASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+.++.+.+.|-. +++|+|||+++...||.+.++||.|++|
T Consensus 583 ~~p~lt~~~f~~-----~~~y~tgD~~r~~~dg~~e~lgr~D~qv 622 (642)
T COG1020 583 NRPDLTAERFIA-----LRLYRTGDLARPLADGALEYLGRKDSQV 622 (642)
T ss_pred CChhhhHHHhhh-----ccCccCCCeeeECCCCeEEEecccccee
Confidence 998888766542 1499999999999999999999988865
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.97 E-value=7.7e-30 Score=247.01 Aligned_cols=222 Identities=18% Similarity=0.162 Sum_probs=173.2
Q ss_pred CCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEe---
Q psy8225 204 KNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVI--- 280 (479)
Q Consensus 204 ~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~--- 280 (479)
...++++++++|||||||.||+|+++|+++..........+ ...++++..+|++|.+|+ ..++.++..|+++++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHH-HHHHHHHHcCCeEEecCc
Confidence 34568899999999999999999999999988776554433 456788999999999997 445677888888776
Q ss_pred cCCCChhHHHHHHHHhc--ccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 281 RSKFSASNFWKDCIKYN--CTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 281 ~~~~~~~~~~~~i~~~~--~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
...+++..+++.+++++ .++...+|..+..++..... ...++++|.++ |+++++++.+++.+ ++. ++++.||+
T Consensus 108 ~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~i~~gG~~l~~~~~~~~~~-~~~-~v~~~YG~ 184 (358)
T PRK07824 108 SAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDAVLVGGGPAPAPVLDAAAA-AGI-NVVRTYGM 184 (358)
T ss_pred CCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceEEEECCCCCCHHHHHHHHh-cCC-cEEecccC
Confidence 34678999999999998 45566788888776665432 23577888876 88999999998875 587 89999999
Q ss_pred cccCcccccCCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCc
Q psy8225 357 TEGNANLMNADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADK 436 (479)
Q Consensus 357 tE~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~ 436 (479)
||++..+. ..|.|++ ++++++. .|||+++ |+ .++.||+++
T Consensus 185 TE~~~~~~-------~~G~~~~------g~~v~i~----------------------~Gei~v~----g~-~~~~gY~~~ 224 (358)
T PRK07824 185 SETSGGCV-------YDGVPLD------GVRVRVE----------------------DGRIALG----GP-TLAKGYRNP 224 (358)
T ss_pred CccCCCcC-------cCceeCC------CCEEEec----------------------CCEEEEe----cC-ccccccCCC
Confidence 99875432 2355544 5666652 2888887 77 899999998
Q ss_pred chhHHHHHhhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 437 KASEKKILRNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 437 ~~~~~~~~~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
+..+. +. .+|||+|||+|++ ++|++++.||.||++
T Consensus 225 ~~~~~--~~-----~~g~~~TGDl~~~-~~g~l~i~GR~~d~i 259 (358)
T PRK07824 225 VDPDP--FA-----EPGWFRTDDLGAL-DDGVLTVLGRADDAI 259 (358)
T ss_pred ccccc--cc-----CCCceecccEEEE-eCCEEEEEeccCCeE
Confidence 75432 21 2679999999999 899999999999975
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.96 E-value=1.4e-27 Score=230.19 Aligned_cols=204 Identities=19% Similarity=0.079 Sum_probs=156.8
Q ss_pred CCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCC--CCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCC
Q psy8225 208 SDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTS--DDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFS 285 (479)
Q Consensus 208 ~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~--~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~ 285 (479)
+..++++|||||||.||+|++||+++...+......+++.. .+++++.+|++|.+|+.+.++.++..|+++++.+.++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 55788999999999999999999999988877776666643 4689999999999998777888999999999988888
Q ss_pred hhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE-ecCCChhhHHHHHHHhCcceeeeeccccccCcccc
Q psy8225 286 ASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI-GNGLRPQVWEPFQKRFGLDRICEFYGATEGNANLM 364 (479)
Q Consensus 286 ~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~-G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~ 364 (479)
+..+++.+..+ +++.++|++++.|.+.. ..+++++.+. |+++++++++.+++. +...+++.||+||++++..
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~ 247 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVGVSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGL 247 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCcceeEecCCCCCHHHHHHHHHh-cccchhheecccccccccc
Confidence 88888877643 78999999999987653 2456788766 899999999999875 5437999999999987554
Q ss_pred cCCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHH
Q psy8225 365 NADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKIL 444 (479)
Q Consensus 365 ~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~ 444 (479)
.. .++..+.+.| ++++.+ + + |. + .|+
T Consensus 248 ~~--~~~~~~~~~p------~~~~~~-~--~-------------------~~---~---~g~------------------ 273 (386)
T TIGR02372 248 RE--APDDPFRLLP------DLACFA-D--T-------------------LS---S---AGL------------------ 273 (386)
T ss_pred cc--CCCCCcccCC------CccccC-C--C-------------------cc---C---CCc------------------
Confidence 32 1233344333 333211 0 0 00 0 011
Q ss_pred hhhccCCCcEEEcCCeeEEecCCcEEEecCCCCCC
Q psy8225 445 RNVYSHGDAAFNTGDILIKDKFQYFYFKDRTGDAC 479 (479)
Q Consensus 445 ~~~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~~ 479 (479)
..|++|||+|++|++|+|+|+||+||++
T Consensus 274 -------~~~~~tgD~g~~d~~G~l~i~GR~dd~I 301 (386)
T TIGR02372 274 -------ARRLDLQDRLAWDKDGGFTILGRKDEIL 301 (386)
T ss_pred -------cceeecCceEEEcCCCcEEEecccCCEE
Confidence 2478999999999999999999999974
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.95 E-value=3.1e-27 Score=233.42 Aligned_cols=234 Identities=18% Similarity=0.082 Sum_probs=172.2
Q ss_pred CCCCcEEEEEccCCCCCcceEEeehHHHHHHhhh---hhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 206 KPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAIS---GRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 206 ~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
..++.+.+++||||||.||++.++|.++...... ....+++.++|++++..+..+..+.....+.....|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 4457788899999999999999999988654332 2334578899999887766544443344556777899998877
Q ss_pred CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCC--CCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccc
Q psy8225 283 KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPED--TQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATE 358 (479)
Q Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~--~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE 358 (479)
..++..+++.|++++++++.++|+++..|++....... ...++|.++ |+++++++.+.+++.||+ ++++.||+||
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~-~v~~~YG~tE 231 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGM-KATDIYGLSE 231 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCC-ceEecccchh
Confidence 77789999999999999999999999988765433222 235788766 899999999999999998 8999999999
Q ss_pred cCc-cc-ccCCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCc
Q psy8225 359 GNA-NL-MNADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADK 436 (479)
Q Consensus 359 ~~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~ 436 (479)
+++ .+ ..+.. ...|.+++ .+.+.+.++|+++++ ++++|+.|||+++ +. .
T Consensus 232 ~~~~~~~~~~~~--~~~g~~~~----~~~~~~eivd~~~g~----------~v~~Ge~Gelvvt----~~---~------ 282 (422)
T TIGR02155 232 VIGPGVAMECVE--TQDGLHIW----EDHFYPEIIDPHTGE----------VLPDGEEGELVFT----TL---T------ 282 (422)
T ss_pred hcCCceeecccc--cCCCceEe----cCeeEEEEECCCCCC----------CCCCCCeeEEEEe----cC---C------
Confidence 852 22 22211 11233221 113566788877776 6789999999987 22 1
Q ss_pred chhHHHHHhhhccCCCcEEEcCCeeEEecC-C-----cEEEecCCCCCC
Q psy8225 437 KASEKKILRNVYSHGDAAFNTGDILIKDKF-Q-----YFYFKDRTGDAC 479 (479)
Q Consensus 437 ~~~~~~~~~~~~~~~~g~~~TGD~g~~d~d-G-----~l~~~GR~~d~~ 479 (479)
+..+ ..+||+|||+|+++++ | .++|.||.||++
T Consensus 283 ----~~~~------p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i 321 (422)
T TIGR02155 283 ----KEAL------PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDML 321 (422)
T ss_pred ----cccc------ceeeEEcCcEEEEECCCCCcccccccccCccCCeE
Confidence 1111 1569999999999876 5 578999999984
No 124
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=1.2e-26 Score=207.22 Aligned_cols=212 Identities=13% Similarity=0.101 Sum_probs=160.0
Q ss_pred HHHHhhcCCCccccEEE---------Eeh-hhHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 53 FVRTIREVPMTGAYKYT---------VTF-QVEDHSNRIANFFKS-KGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 53 l~~~~~~~p~~~a~~~~---------~Ty-~l~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
|...++.+|+++|+++. +|| |+.++++++|+.|++ .|+++||+|+|+++|+++++++++||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56678889999999741 899 999999999999998 6999999999999999999999999999999999
Q ss_pred eecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCC--CCC-CCccCCCccccccccCCcCCCCCC
Q psy8225 122 FINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGT--RRK-PQAKVLPSTTLLDEELPEVSAKSP 198 (479)
Q Consensus 122 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 198 (479)
|++ .+++++++++.+..+.+. .+.. ++.+.. ... ...........+.+.+........
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAA-----GSGE-VVALSLDPLGRRVAGELPPGVIDFAPEVRVHGDQFA 142 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcc-----cCCc-eEEEeccccccCCCCCCCCcccchhhhhhccCCCCC
Confidence 995 678999999887665532 1111 222110 000 000001122344444432211111
Q ss_pred cccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceE
Q psy8225 199 TEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTV 278 (479)
Q Consensus 199 ~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~ 278 (479)
+. ....+++++.++||||+ +|.+++.+. ...+++++|+++ .+|++|.+|+...++.++..|+++
T Consensus 143 ~~--~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~ 206 (227)
T TIGR03089 143 PY--EPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSL 206 (227)
T ss_pred CC--CCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceE
Confidence 11 13356899999999986 666665544 456788999999 999999999988899999999999
Q ss_pred EecCCCChhHHHHHHHHhccc
Q psy8225 279 VIRSKFSASNFWKDCIKYNCT 299 (479)
Q Consensus 279 v~~~~~~~~~~~~~i~~~~~t 299 (479)
++.++|++..+++.|+++|||
T Consensus 207 v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 207 VLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred EEecCCCHHHHHHHHHhhcCC
Confidence 999999999999999999987
No 125
>KOG3628|consensus
Probab=99.94 E-value=4.5e-24 Score=213.14 Aligned_cols=408 Identities=15% Similarity=0.132 Sum_probs=272.7
Q ss_pred chhHHHHHHHhhcCCCccccEEE---------Eeh-hhHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhh
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---------VTF-QVEDHSNRIANFFKSK-GLQRGDAVALFMEGQPEYVCMWLGLSK 115 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---------~Ty-~l~~~~~~la~~L~~~-gi~~gd~V~i~~~n~~e~~~~~lA~~~ 115 (479)
.++.|+|++.+.++|+.+|+... +|| +|..++.+++..|..+ -+++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 77999999999999999999987 999 9999999999999987 589999999999999999999999999
Q ss_pred cCceeeeecCCc------chHHHHHHHHhccceEEEeChhhHHHHHHh--hccCC--cceEEecCCCCCCCccCCCcccc
Q psy8225 116 IGVVAAFINTNQ------RQHILIHSIKVAECKAIIYGAELSEALTEV--KDSIP--GISLYAAGTRRKPQAKVLPSTTL 185 (479)
Q Consensus 116 ~G~~~v~l~~~~------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 185 (479)
+|.+++|+.|.- ..+.+..+++.+++++|+++++....++.- ..... .+..+..-+.. +..
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~------~~t--- 920 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKL------PET--- 920 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhccccc------chh---
Confidence 999999997753 345788899999999999998765544332 11111 00000000000 000
Q ss_pred ccccCCcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccchhhhhhH
Q psy8225 186 LDEELPEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPLYHTAGGL 265 (479)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~ 265 (479)
+........+............+.+|++-+.--++|.--++.++|.++++.++.......+.+..-++...+.+...|+.
T Consensus 921 ~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~ 1000 (1363)
T KOG3628|consen 921 IRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFN 1000 (1363)
T ss_pred hhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHH
Confidence 00000000011111111233456788888888899999999999999999999998888888888888888888888888
Q ss_pred HHHHHHHhcCceEEecCC----CChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCce------eEEE--ecCC
Q psy8225 266 LGIGQCLLGGSTVVIRSK----FSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSV------KMMI--GNGL 333 (479)
Q Consensus 266 ~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~l------r~~~--G~~l 333 (479)
...+...+.|.+.++.++ -++..++..+++|++.-++.+=..+..+.+.......+++.. .++. -+..
T Consensus 1001 ~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RP 1080 (1363)
T KOG3628|consen 1001 HWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERP 1080 (1363)
T ss_pred HHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCcc
Confidence 888889999999777664 378899999999999988887777777766544433332221 1222 3445
Q ss_pred ChhhHHHHHHHhCc-----ceeeeeccccccCccccc-----------CC------CCCCc--ccccC--c---cccCCC
Q psy8225 334 RPQVWEPFQKRFGL-----DRICEFYGATEGNANLMN-----------AD------GKVGA--VGYIP--Y---IAIPFY 384 (479)
Q Consensus 334 ~~~~~~~~~~~~~~-----~~v~~~YG~tE~~~~~~~-----------~~------~~~~~--~g~~~--~---~~~~~~ 384 (479)
...+++-|.+.|.. ..+--.|++----.++.+ .+ ..... +|+|- + .+.-.+
T Consensus 1081 r~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~ 1160 (1363)
T KOG3628|consen 1081 RIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPV 1160 (1363)
T ss_pred HHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccc
Confidence 56666666665521 123333433221111111 00 00011 12211 0 011122
Q ss_pred ceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCc-chhHHHHHhhhcc----CCCcEEEcCC
Q psy8225 385 PVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADK-KASEKKILRNVYS----HGDAAFNTGD 459 (479)
Q Consensus 385 ~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~-~~~~~~~~~~~~~----~~~g~~~TGD 459 (479)
.+++.|++|++-. +|.+|+.||||+. +. +-+.+|++. ++.....|..... .+.+|-||||
T Consensus 1161 ~~~i~IvnPEtk~----------pc~dge~GEIW~~----S~-hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~ 1225 (1363)
T KOG3628|consen 1161 YTDIAIVNPETKG----------PCRDGELGEIWVN----SA-HNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGD 1225 (1363)
T ss_pred cceeEEeCCcccc----------ccccCCcceEEec----cc-cccccccccCchhhhhhhhhhccccccccccceeeee
Confidence 6899999999876 8899999999998 44 566667643 1122223332332 2457999999
Q ss_pred eeEEec------C----CcEEEecCCCCC
Q psy8225 460 ILIKDK------F----QYFYFKDRTGDA 478 (479)
Q Consensus 460 ~g~~d~------d----G~l~~~GR~~d~ 478 (479)
+|++.. + .-||++|-.++.
T Consensus 1226 LGFl~~t~~t~~~~e~~~~LyVlG~i~Et 1254 (1363)
T KOG3628|consen 1226 LGFLRRTSLTDANVERHDLLYVLGAIDET 1254 (1363)
T ss_pred eeeeeeeecccccceeeeeEEEeecccce
Confidence 998832 2 357888876653
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.91 E-value=4.4e-23 Score=204.01 Aligned_cols=235 Identities=16% Similarity=0.083 Sum_probs=165.6
Q ss_pred CCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec
Q psy8225 205 NKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR 281 (479)
Q Consensus 205 ~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 281 (479)
...++++.+.+||||||.||+|.+||.++......... ..++.++|+++...|..+..|.....++++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 34567888999999999999999999998765544333 347889999999988887766544455667788887654
Q ss_pred CCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCC--CCCceeEEE--ecCCChhhHHHHHHHhCcceeeeecccc
Q psy8225 282 SKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPED--TQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGAT 357 (479)
Q Consensus 282 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~--~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~t 357 (479)
.. ....++.|.+++++.+..+|+.+..|++....... ...++|.++ |+++++++.+++.+.||+ ++++.||+|
T Consensus 163 ~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~-~v~~~YG~T 239 (445)
T TIGR03335 163 GK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGC-EVYNTYGST 239 (445)
T ss_pred Cc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCC-cEEecCChh
Confidence 32 34668999999999999999988777654332221 236788766 889999999999999998 999999999
Q ss_pred ccCcccccCCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccCcc
Q psy8225 358 EGNANLMNADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKK 437 (479)
Q Consensus 358 E~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~ 437 (479)
|++.. ..+.. ..|..++ .+.+.+.|+|++++. ++++|+.|||+++ .+..... .
T Consensus 240 E~~~~-~~c~~---~~g~h~~----~d~~~vEIvDp~~~~----------~vp~Ge~GELvvT-------~L~~~~~--r 292 (445)
T TIGR03335 240 EGTMC-GECQA---VAGLHVP----EDLVHLDVYDPRHQR----------FLPDGECGRIVLT-------TLLKPGE--R 292 (445)
T ss_pred hhhhe-EEecC---CCCcccc----CCceEEEEEcCCCCC----------CCcCCCceEEEEE-------ecCCCCc--c
Confidence 98632 22221 2243322 113678889988776 5689999999997 2221000 0
Q ss_pred hhHHHHHhhhccCCCcEEEcCCeeEEe--cC---C----cEEEecCCCCCC
Q psy8225 438 ASEKKILRNVYSHGDAAFNTGDILIKD--KF---Q----YFYFKDRTGDAC 479 (479)
Q Consensus 438 ~~~~~~~~~~~~~~~g~~~TGD~g~~d--~d---G----~l~~~GR~~d~~ 479 (479)
.....+ -|+|||++++. +. | ++...||.|||+
T Consensus 293 -~~~Pli---------RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~ 333 (445)
T TIGR03335 293 -CGSLLI---------NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETI 333 (445)
T ss_pred -CCceEE---------EeecCceEEEecCCCCCCCCCcceeCCCcccCceE
Confidence 001122 38999999873 22 3 244579999984
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.81 E-value=7e-19 Score=165.63 Aligned_cols=235 Identities=21% Similarity=0.128 Sum_probs=170.9
Q ss_pred CCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEe
Q psy8225 204 KNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVI 280 (479)
Q Consensus 204 ~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~ 280 (479)
....++...|--||||||+|+-+.+++..+...+..+.. ..+...+|++....-.....|....-.++-..|++++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 345566666888999999999999999887665554443 44678888876665533333322333455557888777
Q ss_pred cCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCC--CCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccc
Q psy8225 281 RSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPE--DTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGA 356 (479)
Q Consensus 281 ~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~--~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~ 356 (479)
...-+...-++++.+++++++.++|+.+..|++..+... ..-.++|.++ +|+++++.++.+.+.||+ ..++.||.
T Consensus 166 ~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~-~~~diYGl 244 (438)
T COG1541 166 ISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGC-KAFDIYGL 244 (438)
T ss_pred cCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCC-ceeecccc
Confidence 666688899999999999999999999999988876653 3346777766 599999999999999999 89999999
Q ss_pred cccCcc-cccCCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEeecCCcccccccccC
Q psy8225 357 TEGNAN-LMNADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYAD 435 (479)
Q Consensus 357 tE~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~ 435 (479)
||..+. ...+.... |..+ ..+...+.++||++|+ .+++|+.|||++. .+.
T Consensus 245 tE~~g~g~~eC~~~~---glhi----~eD~~~~Ei~dP~t~e----------~l~dge~GelV~T-------~L~----- 295 (438)
T COG1541 245 TEGFGPGAGECTERN---GLHI----WEDHFIFEIVDPETGE----------QLPDGERGELVIT-------TLT----- 295 (438)
T ss_pred ccccCCccccccccc---CCCc----chhhceeeeecCCcCc----------cCCCCCeeEEEEE-------ecc-----
Confidence 998655 33333322 3222 1225778889999999 5688999999987 222
Q ss_pred cchhHHHHHhhhccCCCcEEEcCCeeEEecC----C-----cEEEecCCCCCC
Q psy8225 436 KKASEKKILRNVYSHGDAAFNTGDILIKDKF----Q-----YFYFKDRTGDAC 479 (479)
Q Consensus 436 ~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~d----G-----~l~~~GR~~d~~ 479 (479)
+ ....++ -|+|||+..+.++ | .-.|.||.|||.
T Consensus 296 ~--~~~PlI---------RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l 337 (438)
T COG1541 296 K--EGMPLI---------RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDML 337 (438)
T ss_pred c--cCcceE---------EEEcCCeeEecccCCCCCCccccccccCcccccEE
Confidence 1 112233 3999999999763 3 356899999984
No 128
>KOG1178|consensus
Probab=99.80 E-value=1.1e-18 Score=180.31 Aligned_cols=299 Identities=18% Similarity=0.189 Sum_probs=194.6
Q ss_pred chhHHHHHHHhhcCCCccccEEE-----------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhh
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT-----------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLS 114 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~-----------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~ 114 (479)
-++...+.+.+...|...+..+. +|| +....++.+++.|...|...++.|++++..+.++++..++++
T Consensus 36 g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~ 115 (1032)
T KOG1178|consen 36 GTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVL 115 (1032)
T ss_pred cchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehh
Confidence 45677899999999999888876 899 999999999999999999999999999999999999999999
Q ss_pred hcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHH---HHHhhc-cCCcceEEecCCCCCCCccCCCccccccccC
Q psy8225 115 KIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEA---LTEVKD-SIPGISLYAAGTRRKPQAKVLPSTTLLDEEL 190 (479)
Q Consensus 115 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (479)
++|..+.+++|.++..++...+.+......-...+.... +..... ..+...+. .....|..+.
T Consensus 116 ~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~-------------~~~~~f~~~~ 182 (1032)
T KOG1178|consen 116 AAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVE-------------TIADSFQMVL 182 (1032)
T ss_pred hcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchh-------------hccchhhhhh
Confidence 999999999999992222222222211111111111100 000000 00110000 0011111111
Q ss_pred CcCCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhhhcCCCCCCeEEEeccc-hhhhhhHHHHH
Q psy8225 191 PEVSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRYQTGLTSDDVVYTTLPL-YHTAGGLLGIG 269 (479)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~pl-~h~~g~~~~~~ 269 (479)
..... ....-.-.+..+.+.||||+||.||+|.-+|..+.....+....+.+...+++-....+ +|.. +..+.
T Consensus 183 ~~~~~----r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~--i~~~~ 256 (1032)
T KOG1178|consen 183 HNEDT----REIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDT--IQKFI 256 (1032)
T ss_pred ccCCC----cceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccc--hHHHH
Confidence 11111 11133456678899999999999999999999999998888888888777765222222 2221 22233
Q ss_pred -HHHhcCceEEecCCC---ChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCC----------CCC---CCceeEEE--e
Q psy8225 270 -QCLLGGSTVVIRSKF---SASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKP----------EDT---QHSVKMMI--G 330 (479)
Q Consensus 270 -~~l~~G~~~v~~~~~---~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~----------~~~---l~~lr~~~--G 330 (479)
..+..|+.+..+... .+..+.+.+++|+++..+.+|++.+.++...... ... .+.|+... |
T Consensus 257 ~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ 336 (1032)
T KOG1178|consen 257 GALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGG 336 (1032)
T ss_pred hhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecC
Confidence 344555555555432 3789999999999999999999988877665431 111 23566655 7
Q ss_pred cCCChhhHHHHHHHhCcceeeeeccccccCcccc
Q psy8225 331 NGLRPQVWEPFQKRFGLDRICEFYGATEGNANLM 364 (479)
Q Consensus 331 ~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~ 364 (479)
++...++...+...+...-...-|+.++..+...
T Consensus 337 ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s 370 (1032)
T KOG1178|consen 337 EPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVS 370 (1032)
T ss_pred CccchhhhhhhhhcccceeeeecccCCCCcccee
Confidence 8888888776666554323334488888766554
No 129
>KOG3628|consensus
Probab=99.66 E-value=3.1e-15 Score=150.68 Aligned_cols=387 Identities=15% Similarity=0.119 Sum_probs=250.3
Q ss_pred hHHHHHHHhhcCCCccccEEE--------Eeh-hhHHHHHHHHH-HHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhc
Q psy8225 49 ARPLFVRTIREVPMTGAYKYT--------VTF-QVEDHSNRIAN-FFKSKGLQRGDAVALFMEGQ--PEYVCMWLGLSKI 116 (479)
Q Consensus 49 l~~~l~~~~~~~p~~~a~~~~--------~Ty-~l~~~~~~la~-~L~~~gi~~gd~V~i~~~n~--~e~~~~~lA~~~~ 116 (479)
+..++++.-.+++...|.++. +|| .+..++.++|+ .|.+.|..++|+|.++...+ .|+++..++|...
T Consensus 96 ~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~ 175 (1363)
T KOG3628|consen 96 IIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLL 175 (1363)
T ss_pred hHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhcccccc
Confidence 456677777788888998886 999 99999999999 56666999999999999865 8999999999999
Q ss_pred CceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccCC---cceEEecCCCCCCCccCCCcccccccc-CCc
Q psy8225 117 GVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSIP---GISLYAAGTRRKPQAKVLPSTTLLDEE-LPE 192 (479)
Q Consensus 117 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 192 (479)
|.+++|+++..+.+++..+++....+++++.........+...... .++.+ +...+.-. ..+
T Consensus 176 g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w--------------~t~~~k~~~~~~ 241 (1363)
T KOG3628|consen 176 GIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWW--------------KTNDFKGNYTKD 241 (1363)
T ss_pred ceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhh--------------hcccccceeehh
Confidence 9999999999999999999999999999987654443333221000 01010 01111100 000
Q ss_pred CCCCCCcccccCCCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh--------------------hcCCCCCCeE
Q psy8225 193 VSAKSPTEDIKKNKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY--------------------QTGLTSDDVV 252 (479)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~--------------------~~~~~~~d~~ 252 (479)
.... +..... ..+|-||++++|.--|++.+|. ++...+.+.. .+....++.+
T Consensus 242 k~~~------P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~ 313 (1363)
T KOG3628|consen 242 KIKK------PRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVL 313 (1363)
T ss_pred hccC------Cceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccce
Confidence 0111 222223 7888899999999999999997 4433322211 1223556677
Q ss_pred EEeccchhhhhhHHHHHHHHhcCceEEecCC---CChhHHHHHHHHhcccEEEEehHHHHHHh----cCCCC-------C
Q psy8225 253 YTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK---FSASNFWKDCIKYNCTVAQYIGEMCRYLL----AVPEK-------P 318 (479)
Q Consensus 253 ~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~----~~~~~-------~ 318 (479)
+..+...-..|++++++.+++.|.|.+..++ ..|..+...+.+++++++..--..++... +.+.. .
T Consensus 314 l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~ 393 (1363)
T KOG3628|consen 314 LTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYK 393 (1363)
T ss_pred eeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhcc
Confidence 7777778888999999999999999998886 57788899999999998765433333321 11111 1
Q ss_pred CCCCCceeEEE--ecCCChhhHH----HHHHHhCcc-----------------eeeeeccccccCcccccCCC-------
Q psy8225 319 EDTQHSVKMMI--GNGLRPQVWE----PFQKRFGLD-----------------RICEFYGATEGNANLMNADG------- 368 (479)
Q Consensus 319 ~~~l~~lr~~~--G~~l~~~~~~----~~~~~~~~~-----------------~v~~~YG~tE~~~~~~~~~~------- 368 (479)
..+++++|.++ ...+..+..+ +|.+-+|.. -.+..=+++|.+...-+.+.
T Consensus 394 t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~ 473 (1363)
T KOG3628|consen 394 TPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLP 473 (1363)
T ss_pred CCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCc
Confidence 13577888776 4445544332 222222221 23333344555543322111
Q ss_pred --------------------------CCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCceEEEEee
Q psy8225 369 --------------------------KVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPGILIGMIK 422 (479)
Q Consensus 369 --------------------------~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~Gel~v~~~ 422 (479)
.+..+|. ..++ ++.+.++++++.. .|++++.|||||.++
T Consensus 474 ~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~----i~~g-~~t~~vv~~~t~~----------LC~~~eVGEIwVsS~ 538 (1363)
T KOG3628|consen 474 GEGLLSKEALKLNEVEVDTEDDISSLSVKDVLC----IMPG-DATLAVVNPDTNQ----------LCKTDEVGEIWVSSN 538 (1363)
T ss_pred cceeeeccccccceEEEcchhhhhhcCccccce----eccc-ceEEEEeCCCccc----------ccccCcceeEEEecC
Confidence 1111222 1222 4677777777665 689999999999844
Q ss_pred cCCcccccccccCcchhHHHHHhh-------hccCCCcEEEcCCeeEEecCCcEEEecCCCCC
Q psy8225 423 ESRAESHFNGYADKKASEKKILRN-------VYSHGDAAFNTGDILIKDKFQYFYFKDRTGDA 478 (479)
Q Consensus 423 ~~~~~~~~~gY~~~~~~~~~~~~~-------~~~~~~g~~~TGD~g~~d~dG~l~~~GR~~d~ 478 (479)
+...+||.-+..++..|.. .+.....+.|||=+|++ .+|.+|++|=++|+
T Consensus 539 -----~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv-~~gki~vl~~k~d~ 595 (1363)
T KOG3628|consen 539 -----SLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFV-HNGKIYVLGLKEDG 595 (1363)
T ss_pred -----CcccceeeccccccceEEeeeccccCCCCccchhhhhcceeee-eCCeEEEEEechhh
Confidence 7888899655444433321 11122358999999999 45567777755553
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.41 E-value=5.5e-12 Score=122.41 Aligned_cols=145 Identities=18% Similarity=0.043 Sum_probs=96.0
Q ss_pred cEEEEEccCCCCCcceEEeehHHHHHHhhh-hhh--hcCCCCCCeEEEec--cchhhhhhHHHHHHHHhcCce-EEecC-
Q psy8225 210 KLAYIYTSGTTGLPKAAVMTHVRAMFMAIS-GRY--QTGLTSDDVVYTTL--PLYHTAGGLLGIGQCLLGGST-VVIRS- 282 (479)
Q Consensus 210 ~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~-~~~--~~~~~~~d~~~~~~--pl~h~~g~~~~~~~~l~~G~~-~v~~~- 282 (479)
...+..||||||.|-.+..+.......... ... ..++..++++...+ +. +.+ ..+..... +-...
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly-------~~~~~~~~~~~~~~l 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLY-------QSVNNRWISLDFFDL 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHH-------HHHHhccceeeecCC
Confidence 456678999999999999998765432222 221 12344555544432 11 211 11111111 11111
Q ss_pred CCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCCCCCCCCceeEEE--ecCCChhhHHHHHHHhCcceeeeeccccccC
Q psy8225 283 KFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEKPEDTQHSVKMMI--GNGLRPQVWEPFQKRFGLDRICEFYGATEGN 360 (479)
Q Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~l~~lr~~~--G~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~ 360 (479)
..+.+..++.|++++++++.++|+.+..|++........ ..++.++ ||.++++..+.+++.||+ ++++.||+|| |
T Consensus 173 ~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg~-~V~~~YG~tE-g 249 (430)
T TIGR02304 173 LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFKN-TVHQIYQATE-G 249 (430)
T ss_pred CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhCC-CeeEccCCch-h
Confidence 246788999999999999999999999998865443332 3566554 999999999999999998 8999999999 5
Q ss_pred ccccc
Q psy8225 361 ANLMN 365 (479)
Q Consensus 361 ~~~~~ 365 (479)
.+...
T Consensus 250 ~la~e 254 (430)
T TIGR02304 250 FLAST 254 (430)
T ss_pred heEEe
Confidence 44433
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.18 E-value=1.8e-09 Score=102.49 Aligned_cols=228 Identities=19% Similarity=0.207 Sum_probs=132.6
Q ss_pred CCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hc-CCCCCC-eEEEeccchhhhhh----HHHHHHHHhcC
Q psy8225 205 NKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QT-GLTSDD-VVYTTLPLYHTAGG----LLGIGQCLLGG 275 (479)
Q Consensus 205 ~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~-~~~~~d-~~~~~~pl~h~~g~----~~~~~~~l~~G 275 (479)
...+++..++-||||||.|.-+.+.+..+......+.. .+ +..... .++...|-...... ..........+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 34566778889999999987677766555544333222 22 222222 23333343221111 11222233445
Q ss_pred ceEEecC-CCChhHHHHHHH----HhcccEEEEehHHHHHHhcCCCCCC--CCCC-ceeEEE-e-------cCCC-hhhH
Q psy8225 276 STVVIRS-KFSASNFWKDCI----KYNCTVAQYIGEMCRYLLAVPEKPE--DTQH-SVKMMI-G-------NGLR-PQVW 338 (479)
Q Consensus 276 ~~~v~~~-~~~~~~~~~~i~----~~~~t~~~~~p~~l~~l~~~~~~~~--~~l~-~lr~~~-G-------~~l~-~~~~ 338 (479)
....+.. .++.+.++..+. +.++..+++.|.++..++...+... ..++ ..+++- | +.++ ++..
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 5544432 356666666554 4467778888887666554333222 2233 344444 2 2354 6777
Q ss_pred HHHHHHhCc---ceeeeeccccccCcccccCCCCCCcccccCccccCCCceeeEEeCCCCCCccccCCCccccccCCCCc
Q psy8225 339 EPFQKRFGL---DRICEFYGATEGNANLMNADGKVGAVGYIPYIAIPFYPVGLIKCDPETSEPIRNKDGLCIPCKAEEPG 415 (479)
Q Consensus 339 ~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~~~~i~~~~g~~~~~~~~~~G 415 (479)
+.+.+.||. ..+++.|||||........... -.++| .. +.+.|+++.+ +|+.|+.|
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~----~~~~p------~w-V~iRDp~tl~----------~~~~Ge~G 304 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG----HFHVP------PW-VIIRDPETLE----------PLPPGETG 304 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeCCCC----cccCC------Ce-EEEECCCCCc----------CCCCCCee
Confidence 788888987 5899999999987654433211 11222 23 7777988766 77999999
Q ss_pred eEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecC--------CcEEEecCCCC
Q psy8225 416 ILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKF--------QYFYFKDRTGD 477 (479)
Q Consensus 416 el~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~d--------G~l~~~GR~~d 477 (479)
-|.+- .+.+ ..| -+..-|.|+|.+..+ .++.++||.+.
T Consensus 305 li~vi----dl~~--~s~------------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 305 LIQVI----DLAN--TSY------------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred EEEEE----cccc--cCC------------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 99765 3310 111 345789999988654 27999999863
No 132
>PRK09188 serine/threonine protein kinase; Provisional
Probab=97.67 E-value=3e-05 Score=74.03 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=24.2
Q ss_pred CCcEEEcCCeeEE-ecCCcEEEecCCC
Q psy8225 451 GDAAFNTGDILIK-DKFQYFYFKDRTG 476 (479)
Q Consensus 451 ~~g~~~TGD~g~~-d~dG~l~~~GR~~ 476 (479)
.+|||+|||+|++ |+||+|+|+||.|
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~ 233 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG 233 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc
Confidence 3899999999998 7999999999987
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=97.28 E-value=0.00083 Score=68.00 Aligned_cols=119 Identities=21% Similarity=0.240 Sum_probs=62.2
Q ss_pred CCceeEEE--ecCCChhhHHHHHHHhCcc-eeeeeccccccCcccccCCCCCCcccccCccccCCCceeeEEeCCCC---
Q psy8225 322 QHSVKMMI--GNGLRPQVWEPFQKRFGLD-RICEFYGATEGNANLMNADGKVGAVGYIPYIAIPFYPVGLIKCDPET--- 395 (479)
Q Consensus 322 l~~lr~~~--G~~l~~~~~~~~~~~~~~~-~v~~~YG~tE~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~d~~~--- 395 (479)
.++|+++. ++.-...-..++++.+|.. .+...|++||+...+ +.. ++..+.++-+..+ -.+..-+++..
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i-~~~--~~~~~~~l~~~~~--ffEFip~~~~~~~~ 340 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGI-PLD--PEDPGYVLAPDSG--FFEFIPVDEDEQNP 340 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEE-ES---CCC--EEE-TTSS--EEEEEE-STT----
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEE-ecC--CCCCceEeecCCe--EEEEEeccCCcccc
Confidence 57888554 5554456677888888863 344689999974333 221 2222332211111 24555455332
Q ss_pred ---CCccccCCCccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEec--CC--c
Q psy8225 396 ---SEPIRNKDGLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDK--FQ--Y 468 (479)
Q Consensus 396 ---~~~i~~~~g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~--dG--~ 468 (479)
.+.+ ..-+|+.|+.=||++.. . .|.|. |+.||+.++.. ++ .
T Consensus 341 ~~~~~~l-----~~~ele~G~~YelviTt----~----~GLyR-------------------Y~iGDvVrv~gf~~~~P~ 388 (528)
T PF03321_consen 341 SEQPKTL-----LLHELEVGEEYELVITT----N----SGLYR-------------------YRIGDVVRVTGFYNQTPR 388 (528)
T ss_dssp ---SSSE-----EGGG--TT-EEEEEEES----T----TS-SS-------------------EEECEEEEEEEEETTEEE
T ss_pred cCCCcee-----cHHHhcCCCeEEEEEec----c----cceee-------------------eecCCEEEEeeccCCCcE
Confidence 1211 12356777777888862 1 33222 89999999954 45 7
Q ss_pred EEEecCCCC
Q psy8225 469 FYFKDRTGD 477 (479)
Q Consensus 469 l~~~GR~~d 477 (479)
+.|+||.+.
T Consensus 389 i~F~~R~~~ 397 (528)
T PF03321_consen 389 IEFVGRRGQ 397 (528)
T ss_dssp EEEEEETTE
T ss_pred EEEeccCCc
Confidence 999999884
No 134
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=95.80 E-value=0.097 Score=53.58 Aligned_cols=127 Identities=14% Similarity=0.106 Sum_probs=64.7
Q ss_pred CCceeE---EEecCCChhhHHHHHHHhCcc-eeeeeccccccCcccccCC-CCCCcccccCccccCCCceeeEEeCCCCC
Q psy8225 322 QHSVKM---MIGNGLRPQVWEPFQKRFGLD-RICEFYGATEGNANLMNAD-GKVGAVGYIPYIAIPFYPVGLIKCDPETS 396 (479)
Q Consensus 322 l~~lr~---~~G~~l~~~~~~~~~~~~~~~-~v~~~YG~tE~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~i~d~~~~ 396 (479)
.++++. +.++.+. .-+..++..+|.. .+...|++||+...+-..+ ..+...+..+- +...-.+..-+++...
T Consensus 301 WPnl~~i~~~~~G~~~-~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~--~~~~ffEFiP~~~~~~ 377 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA-QYIPMLEYYSGGLPMASTIYASSESYFGINLNPMCKPSEVSYTIM--PNMAYFEFLPHNHDGD 377 (597)
T ss_pred CCCCCeEEEEecCChH-HHHHHHHHHcCCCccccccccccceEEEeecCCCCCCCCcceEec--CCcEEEEeeecccCCc
Confidence 567554 3455555 5566777767553 4557899999764432211 22333333211 1111133333332211
Q ss_pred CccccCC-CccccccCCCCceEEEEeecCCcccccccccCcchhHHHHHhhhccCCCcEEEcCCeeEEecC----CcEEE
Q psy8225 397 EPIRNKD-GLCIPCKAEEPGILIGMIKESRAESHFNGYADKKASEKKILRNVYSHGDAAFNTGDILIKDKF----QYFYF 471 (479)
Q Consensus 397 ~~i~~~~-g~~~~~~~~~~Gel~v~~~~~~~~~~~~gY~~~~~~~~~~~~~~~~~~~g~~~TGD~g~~d~d----G~l~~ 471 (479)
....+.+ =...+|+.|+.=+|++... .|.| -|+.||+.+++.- =.|.|
T Consensus 378 ~~~~~~~~v~l~eVe~G~~Y~lVvTT~--------~GLy-------------------RY~iGDvVrvtgf~~~~P~i~F 430 (597)
T PLN02249 378 GALDETSLVELADVEVGKEYELVITTY--------AGLY-------------------RYRVGDILRVTGFHNSAPQFKF 430 (597)
T ss_pred ccCCCCcEecHHHcCCCCeEEEEEEcc--------ccee-------------------EeecCCEEEEeeccCCCcEEEE
Confidence 0000000 0122566777778887621 2221 2899999999643 26899
Q ss_pred ecCCCCC
Q psy8225 472 KDRTGDA 478 (479)
Q Consensus 472 ~GR~~d~ 478 (479)
+||.+.+
T Consensus 431 ~gR~~~~ 437 (597)
T PLN02249 431 IRRKNVL 437 (597)
T ss_pred EccCCcc
Confidence 9997753
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=95.52 E-value=0.65 Score=47.45 Aligned_cols=28 Identities=25% Similarity=0.220 Sum_probs=23.2
Q ss_pred CCCcEEEEEccCCCC-CcceEEeehHHHH
Q psy8225 207 PSDKLAYIYTSGTTG-LPKAAVMTHVRAM 234 (479)
Q Consensus 207 ~~~~~~i~~TSGTTG-~pK~v~~s~~~l~ 234 (479)
++.+..+..|||||| ++|-+..|+..+-
T Consensus 88 ~~pi~~F~~SSGTT~g~~K~IP~t~e~l~ 116 (606)
T PLN02247 88 AQPITELLTSSGTSGGQPKLMPSTAEELD 116 (606)
T ss_pred CCCcceeeccCCCCCCceeEeeccHHHHH
Confidence 456677889999995 8999999997654
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=94.91 E-value=0.47 Score=48.34 Aligned_cols=29 Identities=17% Similarity=0.095 Sum_probs=23.2
Q ss_pred CCCcEEEEEccCCCC-CcceEEeehHHHHH
Q psy8225 207 PSDKLAYIYTSGTTG-LPKAAVMTHVRAMF 235 (479)
Q Consensus 207 ~~~~~~i~~TSGTTG-~pK~v~~s~~~l~~ 235 (479)
+..+..+..|||||| ++|-+..|+..+-.
T Consensus 100 ~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 100 SKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred CCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 445557789999997 69999999987654
No 137
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.44 E-value=0.25 Score=47.95 Aligned_cols=88 Identities=18% Similarity=0.121 Sum_probs=70.9
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEe
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIY 146 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 146 (479)
+|+ +...-+..+|+.|...|..+||+|.....-+.. -.-..+|+.++|+.++|+.+... +....++++.++.+|.+
T Consensus 110 ~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~-~~~~~l~~df~~tvI~~ 188 (438)
T COG1541 110 YTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNT-ERQLELMKDFKPTVIAA 188 (438)
T ss_pred cCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccH-HHHHHHHHhcCCcEEEE
Confidence 899 999999999999999999999998877762211 16678999999999999988433 45567899999999999
Q ss_pred ChhhHHHHHHhh
Q psy8225 147 GAELSEALTEVK 158 (479)
Q Consensus 147 ~~~~~~~~~~~~ 158 (479)
.+...-.+.+.+
T Consensus 189 tps~~l~lae~~ 200 (438)
T COG1541 189 TPSYLLYLAEEA 200 (438)
T ss_pred ChHHHHHHHHHH
Confidence 987655444433
No 138
>KOG1177|consensus
Probab=86.93 E-value=9.6 Score=37.45 Aligned_cols=93 Identities=9% Similarity=0.038 Sum_probs=71.9
Q ss_pred cCCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcC--CchHHHHHHHHhhhcCceeeee
Q psy8225 59 EVPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFME--GQPEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 59 ~~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~--n~~e~~~~~lA~~~~G~~~v~l 123 (479)
..||.++-+.. +|. ++.+.+..++..+ |+...+++.+-.| .+.-.++..+|++..|+..|.-
T Consensus 231 ~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp 307 (596)
T KOG1177|consen 231 LSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFP 307 (596)
T ss_pred cCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEee
Confidence 45677766665 899 9999998887765 6666445544444 3455577889999999999988
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHH
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
.|.+.+...-+.+.+.+|..++.....+-.+
T Consensus 308 ~~~f~~k~alqai~~ekcT~l~gtPtM~~Dl 338 (596)
T KOG1177|consen 308 APSFDPKDALQAISNEKCTTLYGTPTMFVDL 338 (596)
T ss_pred CCCCChHHHHHHHHhhceEEEecChHHHHHH
Confidence 9999999999999999999999988655433
No 139
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=86.26 E-value=5.4 Score=39.44 Aligned_cols=85 Identities=16% Similarity=0.119 Sum_probs=64.4
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--HHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEe
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQP--EYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIY 146 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 146 (479)
+|. .+......++..+...|++++|++........ ......+++...|+.++++.+.. .+.+...+++.++.+++.
T Consensus 95 ~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~~ 173 (422)
T TIGR02155 95 YTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIMV 173 (422)
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEEE
Confidence 677 77777777788888889999999877655432 22334677888999999887654 477889999999999999
Q ss_pred ChhhHHHHH
Q psy8225 147 GAELSEALT 155 (479)
Q Consensus 147 ~~~~~~~~~ 155 (479)
.......+.
T Consensus 174 ~Ps~l~~L~ 182 (422)
T TIGR02155 174 TPSYMLNLL 182 (422)
T ss_pred cHHHHHHHH
Confidence 887655443
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=85.04 E-value=7.5 Score=38.83 Aligned_cols=79 Identities=16% Similarity=0.138 Sum_probs=60.7
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEe
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIY 146 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 146 (479)
+|. ++...+...+..+...|+.++|++.+..+.+.. .....+++...|+.+++... .+....+++..++.+++.
T Consensus 106 ~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~~ 182 (445)
T TIGR03335 106 LTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIVA 182 (445)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEEE
Confidence 788 998888888888888999999999988876543 23456788899998776543 234567889999999987
Q ss_pred ChhhH
Q psy8225 147 GAELS 151 (479)
Q Consensus 147 ~~~~~ 151 (479)
.....
T Consensus 183 ~ps~l 187 (445)
T TIGR03335 183 SVFKL 187 (445)
T ss_pred CHHHH
Confidence 66543
No 141
>KOG1179|consensus
Probab=82.46 E-value=1.6 Score=43.42 Aligned_cols=50 Identities=46% Similarity=0.790 Sum_probs=42.5
Q ss_pred cccccCccccceeeeee-cCCCcccHHHHHHhhhhcccchhHHHHHHHhhc
Q psy8225 10 STQIPNVEGKAGMAAIV-DTENSLDLKQLISGMQKTLPTYARPLFVRTIRE 59 (479)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 59 (479)
.+.+|+.|||+||+++. +.....|..++......++|.+..-.|.+..++
T Consensus 543 GV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~LP~YA~P~FlRl~~~ 593 (649)
T KOG1179|consen 543 GVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENLPSYARPRFLRLQDE 593 (649)
T ss_pred EEecCCccCccceEEEEecCcccchHHHHHHHHHhhCccccchHHHHHHhh
Confidence 35699999999999998 666678999999999999999988777776554
No 142
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=78.52 E-value=24 Score=34.56 Aligned_cols=93 Identities=16% Similarity=0.144 Sum_probs=69.6
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHc-CCCCCCEEEEEcCCc--hHHHHHHHHhhhcCceeeee
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSK-GLQRGDAVALFMEGQ--PEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~-gi~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~v~l 123 (479)
.++.++++.. +|+ .+...+..+. +... +++ |++...+|-+ ..++..+++++..|+..+..
T Consensus 153 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 228 (417)
T PF00501_consen 153 SPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLP 228 (417)
T ss_dssp TTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEE
T ss_pred CccceeEeeccccccccccccccccccccccccccc--cccccccC--ceEEeecccccccccccccccccccccccccc
Confidence 5688888886 899 9988888877 4333 333 6777776654 33347889999999999888
Q ss_pred cCCcc--hHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 124 NTNQR--QHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 124 ~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
+.... ++.+...+++.++.++++.......+.+
T Consensus 229 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~ 263 (417)
T PF00501_consen 229 SPFDLFDPESLLELISRYKPTILFAVPSMLEALLQ 263 (417)
T ss_dssp SSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHH
T ss_pred ccccccccccchhcccccccccccccccccccccc
Confidence 76644 5678899999999999999887766654
No 143
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=78.42 E-value=19 Score=36.49 Aligned_cols=93 Identities=14% Similarity=0.013 Sum_probs=68.2
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.++++.. +|+ .+...+..+... .+++++|++...++-... +...+++++..|+.+++.
T Consensus 164 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 164 DPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 4456676664 788 887666554433 378899999888775433 345578899999987764
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
+..+++.+...+++.++.+++........+..
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 271 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLLQ 271 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHHc
Confidence 56788999999999999999988776665544
No 144
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=77.79 E-value=10 Score=33.79 Aligned_cols=54 Identities=17% Similarity=0.238 Sum_probs=44.1
Q ss_pred HHcCCCCCCEEEEEcCCch--HHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccc
Q psy8225 86 KSKGLQRGDAVALFMEGQP--EYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAEC 141 (479)
Q Consensus 86 ~~~gi~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 141 (479)
...|++++|++. .+|=.. -+...+++++..|+..+.. +.++++++.+.+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556899999999 888544 3445789999999998877 68999999999888775
No 145
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=77.21 E-value=23 Score=35.83 Aligned_cols=83 Identities=11% Similarity=-0.023 Sum_probs=61.8
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEY-VCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
+|+ .+...+..... ..+++++|++....+-...+ ....++++..|+.++..+.. +.+.+.+.+++.++..+++.
T Consensus 187 ~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~ 262 (521)
T PRK06187 187 LSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFAV 262 (521)
T ss_pred eehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEch
Confidence 788 87766655544 44889999998888755333 34445588889888766654 88999999999999999998
Q ss_pred hhhHHHHHH
Q psy8225 148 AELSEALTE 156 (479)
Q Consensus 148 ~~~~~~~~~ 156 (479)
......+..
T Consensus 263 p~~~~~l~~ 271 (521)
T PRK06187 263 PTIWQMLLK 271 (521)
T ss_pred HHHHHHHHc
Confidence 876665544
No 146
>PLN03051 acyl-activating enzyme; Provisional
Probab=74.91 E-value=29 Score=35.15 Aligned_cols=93 Identities=10% Similarity=-0.097 Sum_probs=64.5
Q ss_pred CCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhcCceeeeecCC
Q psy8225 61 PMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE-YVCMWLGLSKIGVVAAFINTN 126 (479)
Q Consensus 61 p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~v~l~~~ 126 (479)
++.+|++.. +|+ .+...+... ....++.++|++...+|-... ....+++++..|+.++.....
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 466777775 788 765543322 234478889988766664322 123567788899988877655
Q ss_pred cchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 127 QRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 127 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
...+.+...+++.++.++.........+.+
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 567889999999999999998876655543
No 147
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=74.88 E-value=31 Score=34.03 Aligned_cols=94 Identities=11% Similarity=0.009 Sum_probs=64.5
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE-YVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
+|+ .+...+......+ +++++|++...++-..- .+..+++++..|+..+..++. +.+.+.+++.++.++...
T Consensus 131 ~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~~~ 204 (436)
T TIGR01923 131 HTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHISLV 204 (436)
T ss_pred EehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEEeH
Confidence 788 8877766666544 78999998887775322 233567888899888776543 388889999999999998
Q ss_pred hhhHHHHHHhhccCCcceEEec
Q psy8225 148 AELSEALTEVKDSIPGISLYAA 169 (479)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~ 169 (479)
......+.+.....+.++.+..
T Consensus 205 P~~l~~l~~~~~~~~~l~~~~~ 226 (436)
T TIGR01923 205 PTQLNRLLDEGGHNENLRKILL 226 (436)
T ss_pred HHHHHHHHhCcCCCCceEEEEE
Confidence 7766555443322234554433
No 148
>PRK08315 AMP-binding domain protein; Validated
Probab=73.51 E-value=35 Score=35.03 Aligned_cols=91 Identities=12% Similarity=0.029 Sum_probs=65.7
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chHHHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEG--QPEYVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.++++.. +|+ .+...+..+... .+++++|++....+- ...++..+++.+..|+..+...
T Consensus 197 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~ 273 (559)
T PRK08315 197 DPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPG 273 (559)
T ss_pred CCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEec
Confidence 3456666665 777 776555544433 388999999887775 3344556788888898887666
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEA 153 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 153 (479)
....+..+...+++.++.+++........
T Consensus 274 ~~~~~~~~~~~l~~~~~t~~~~~P~~~~~ 302 (559)
T PRK08315 274 EGFDPLATLAAVEEERCTALYGVPTMFIA 302 (559)
T ss_pred CCCCHHHHHHHHHHcCCeEEecchHHHHH
Confidence 66778889999999999999887765433
No 149
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=69.90 E-value=45 Score=34.23 Aligned_cols=94 Identities=13% Similarity=0.019 Sum_probs=66.1
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--HHHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQP--EYVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.+|++.. +|+ .+...+.... ...++.++|++...+|-.. -+....+..+..|+.++...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 5677887776 788 8766544433 3347888998888777432 22333566777888776655
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
....++.+...+++.++.++.........+.+
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 45778899999999999999998877665543
No 150
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=69.45 E-value=34 Score=31.65 Aligned_cols=90 Identities=13% Similarity=0.106 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCc----chHHHHHHHHhccceEEEeChh-h
Q psy8225 76 DHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQ----RQHILIHSIKVAECKAIIYGAE-L 150 (479)
Q Consensus 76 ~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~vi~~~~-~ 150 (479)
-|...+|..|++.|. .|.+++.+....... .+...|..+..++... ..+++..+++..+++++|+|.- .
T Consensus 18 ~Rcl~LA~~l~~~g~----~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQGA----EVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHCCC----EEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 477889999977653 566666665554433 3357777777674432 3457889999999999999873 2
Q ss_pred HHHHHHhhccCCcceEEecCCC
Q psy8225 151 SEALTEVKDSIPGISLYAAGTR 172 (479)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~ 172 (479)
.....+..+.. ..+++++++.
T Consensus 92 ~~~~~~~~k~~-~~~l~~iDD~ 112 (279)
T TIGR03590 92 DADWEKLIKEF-GRKILVIDDL 112 (279)
T ss_pred CHHHHHHHHHh-CCeEEEEecC
Confidence 22233322221 3455555543
No 151
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=68.32 E-value=49 Score=34.15 Aligned_cols=94 Identities=7% Similarity=-0.157 Sum_probs=66.7
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.+|++.. +|+ .+...+... ....+++++|++....+-... +...+++.+..|+..+...
T Consensus 203 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 203 DREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTG---KYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHH---HHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 3466777765 788 775544333 333478889987666554432 2345678888999888777
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
....++.+...+++.++.+++........+.+
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 311 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPTAIRMLMG 311 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 67889999999999999999998877666544
No 152
>PRK12583 acyl-CoA synthetase; Provisional
Probab=68.00 E-value=56 Score=33.51 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=64.5
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chHHHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEG--QPEYVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.+|++.. +|+ .+...+..+... .+++++|++....+- ....+..+++++..|+.++...
T Consensus 199 ~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~ 275 (558)
T PRK12583 199 DRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPN 275 (558)
T ss_pred CCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeec
Confidence 4556666554 788 886655554443 378899998877764 3445666788888898877545
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSE 152 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 152 (479)
....+..+.+.+++.++.+++.......
T Consensus 276 ~~~~~~~~~~~i~~~~~t~l~~~P~~~~ 303 (558)
T PRK12583 276 EAFDPLATLQAVEEERCTALYGVPTMFI 303 (558)
T ss_pred CCCCHHHHHHHHHHcCCeEEeccHHHHH
Confidence 5567888889999999999988776543
No 153
>KOG0023|consensus
Probab=67.33 E-value=31 Score=32.25 Aligned_cols=75 Identities=16% Similarity=0.187 Sum_probs=57.4
Q ss_pred HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHHhhccC
Q psy8225 84 FFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTEVKDSI 161 (479)
Q Consensus 84 ~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~ 161 (479)
.|++.|++||++|+|..--+.-.+...+|.++ |..++.|+.... .-...++..++++.+...+..+..+.+....
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~~--kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~ 247 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSSK--KKEEAIKSLGADVFVDSTEDPDIMKAIMKTT 247 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCch--hHHHHHHhcCcceeEEecCCHHHHHHHHHhh
Confidence 57788999999999999999999999998865 577777776543 3346788899999998765556665554433
No 154
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=67.33 E-value=60 Score=31.55 Aligned_cols=94 Identities=19% Similarity=0.128 Sum_probs=68.7
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhcCceeeeecC
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE-YVCMWLGLSKIGVVAAFINT 125 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~v~l~~ 125 (479)
.++.++++.. +|+ .+...+..+.. ..+++++|++....+-... .+..+++.+..|+..+..+.
T Consensus 118 ~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~ 194 (408)
T TIGR01733 118 GPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPE 194 (408)
T ss_pred CCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcCh
Confidence 3566777765 688 78766666655 3367789988888776544 35567778888887776665
Q ss_pred Ccc--hHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 126 NQR--QHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 126 ~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
... .+.+..+++..++..+++.......+.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~ 227 (408)
T TIGR01733 195 DEERDAALLAALIAEHPVTVLNLTPSLLALLAA 227 (408)
T ss_pred hhccCHHHHHHHHHHcCceEEEeCHHHHHHHHH
Confidence 544 6788999999999999998877766544
No 155
>PRK08308 acyl-CoA synthetase; Validated
Probab=66.49 E-value=95 Score=30.41 Aligned_cols=94 Identities=6% Similarity=0.091 Sum_probs=67.5
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.++++.. +|+ .+...+..+...+ ++..+|++...+|-... ++..++..+..|+..+...
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEAL---NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhh---CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 4566777765 788 8877666555443 56788888877775533 3456788888998877654
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHHHHh
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEALTEV 157 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 157 (479)
...++.+...+++.++.+++........+.+.
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~ 207 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPLMLHILGRL 207 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhc
Confidence 45677888899999999999887766655443
No 156
>PLN02565 cysteine synthase
Probab=66.12 E-value=1e+02 Score=29.19 Aligned_cols=66 Identities=9% Similarity=-0.013 Sum_probs=50.7
Q ss_pred HHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 83 NFFKSKGL-QRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 83 ~~L~~~gi-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
..+.+.|. .+|....+....+-.-+...++|..+|..++.+-|...+.+....++..++++++++.
T Consensus 55 ~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 55 TDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred HHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 34445564 7785544555555566667778888999999988888889999999999999999975
No 157
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=63.98 E-value=72 Score=32.22 Aligned_cols=83 Identities=6% Similarity=0.039 Sum_probs=62.9
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE-YVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
+|+ .+...+......+ +++++|++...++-... .+..+++++..|+.++.. +...++.+.+.+++.++.++...
T Consensus 181 ~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 256 (515)
T TIGR03098 181 LSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLAAV 256 (515)
T ss_pred EecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEecC
Confidence 788 8877666655443 67889999888886543 245667888899988755 55778889999999999999998
Q ss_pred hhhHHHHHH
Q psy8225 148 AELSEALTE 156 (479)
Q Consensus 148 ~~~~~~~~~ 156 (479)
......+..
T Consensus 257 P~~~~~l~~ 265 (515)
T TIGR03098 257 PPLWAQLAQ 265 (515)
T ss_pred hHHHHHHHh
Confidence 877665544
No 158
>PRK06164 acyl-CoA synthetase; Validated
Probab=62.48 E-value=69 Score=32.73 Aligned_cols=93 Identities=14% Similarity=0.089 Sum_probs=67.9
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhcCceeeeecC
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE-YVCMWLGLSKIGVVAAFINT 125 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~v~l~~ 125 (479)
.++.++++.. +|+ .+...+..++..+ ++.+++++...+|-... .+..+++.+..|+.++.. +
T Consensus 179 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 179 DPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 3567777774 788 8876666555554 67899999888885422 245577888888877655 5
Q ss_pred CcchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 126 NQRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 126 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
......+...+++.++.+++........+..
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 6778889999999999999988876655543
No 159
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=61.32 E-value=1e+02 Score=29.90 Aligned_cols=62 Identities=5% Similarity=-0.016 Sum_probs=48.8
Q ss_pred HcC-CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 87 SKG-LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 87 ~~g-i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+.| ++||....+....+-.-+.+.++|...|..+..+-|...+.+-..+++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67775444445566667777788899999999998888888889999999999999974
No 160
>PRK07638 acyl-CoA synthetase; Validated
Probab=61.15 E-value=1.3e+02 Score=30.18 Aligned_cols=84 Identities=7% Similarity=0.021 Sum_probs=60.1
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE-YVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
+|. .+...+...+ ...+++++|++....+-... ++...+..+..|+..+.. +...++++...+++.++.++...
T Consensus 163 ~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 238 (487)
T PRK07638 163 RAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMYTV 238 (487)
T ss_pred EecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEEeC
Confidence 677 7765554433 33478899998877664433 345566677888887744 56788999999999999999998
Q ss_pred hhhHHHHHHh
Q psy8225 148 AELSEALTEV 157 (479)
Q Consensus 148 ~~~~~~~~~~ 157 (479)
......+...
T Consensus 239 P~~~~~l~~~ 248 (487)
T PRK07638 239 PTMLESLYKE 248 (487)
T ss_pred cHHHHHHHhC
Confidence 8777665543
No 161
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=59.47 E-value=1.1e+02 Score=32.16 Aligned_cols=78 Identities=10% Similarity=0.042 Sum_probs=61.5
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-CCCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-SKFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..+++++|++...+|..--. +..++++...|+..+.. +.+.++.+...+++.++.++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 168 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP--LIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLI 168 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEE
Confidence 56899888776665554 45899999999999976543 45677888889887755 46889999999999999998
Q ss_pred EEeh
Q psy8225 302 QYIG 305 (479)
Q Consensus 302 ~~~p 305 (479)
++..
T Consensus 169 i~~~ 172 (647)
T PTZ00237 169 ITTN 172 (647)
T ss_pred EEcc
Confidence 8754
No 162
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=58.72 E-value=90 Score=29.10 Aligned_cols=61 Identities=8% Similarity=0.091 Sum_probs=48.2
Q ss_pred HcC-CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 87 SKG-LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 87 ~~g-i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+.| +++|+. .|=.-.+---+...+.|...|..++.+-|.....+-..+|+..++++++++.
T Consensus 55 ~~G~l~pG~t-IVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGT-IVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCE-EEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 345 888983 3444444455667777888899999999988889999999999999999986
No 163
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=58.29 E-value=81 Score=25.52 Aligned_cols=105 Identities=18% Similarity=0.183 Sum_probs=0.0
Q ss_pred CCCCCeEEEeccch-hhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEEEe---hHHHHHHhcCCCCCCC
Q psy8225 246 LTSDDVVYTTLPLY-HTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQYI---GEMCRYLLAVPEKPED 320 (479)
Q Consensus 246 ~~~~d~~~~~~pl~-h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~---p~~l~~l~~~~~~~~~ 320 (479)
++...+++.+.+-- |..|........-..|..++... ...++++.+.+.++++.++..+ .+....+.+..+.-..
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIE 80 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHh
Q ss_pred C-CCceeEEEecCC------ChhhHHHHHHHhCcceee
Q psy8225 321 T-QHSVKMMIGNGL------RPQVWEPFQKRFGLDRIC 351 (479)
Q Consensus 321 ~-l~~lr~~~G~~l------~~~~~~~~~~~~~~~~v~ 351 (479)
. ++.+++++|+.+ +.+..+.+++. |...++
T Consensus 81 ~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~-G~~~vf 117 (137)
T PRK02261 81 AGLGDILLYVGGNLVVGKHDFEEVEKKFKEM-GFDRVF 117 (137)
T ss_pred cCCCCCeEEEECCCCCCccChHHHHHHHHHc-CCCEEE
No 164
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=58.01 E-value=81 Score=32.50 Aligned_cols=93 Identities=11% Similarity=0.046 Sum_probs=65.6
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhcCceeeeecC
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE-YVCMWLGLSKIGVVAAFINT 125 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~v~l~~ 125 (479)
.++.+|++.. +|+ .+...+.... ...++.++|++....|-... -+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 4577777765 788 7765544433 23478899988887774432 233567778888877654 5
Q ss_pred CcchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 126 NQRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 126 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
.+.+..+...+++.++.++.........+.+
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 6788899999999999999998876655443
No 165
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=57.20 E-value=1.3e+02 Score=32.28 Aligned_cols=92 Identities=8% Similarity=0.006 Sum_probs=64.4
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQ--PEYVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.+|++.. +|+ .+...+..+... .++.++|++...+|-. ..+...+++.+..|+.++...
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 4567777765 788 887766555432 3788999988887743 334456778888999888665
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
.......+...+++.++.++.........+
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 469 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTFLGNY 469 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHHHHHh
Confidence 444556677888899999888776554433
No 166
>PRK11761 cysM cysteine synthase B; Provisional
Probab=57.05 E-value=93 Score=29.05 Aligned_cols=67 Identities=9% Similarity=0.083 Sum_probs=50.3
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 81 IANFFKSKG-LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 81 la~~L~~~g-i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+...+.+.| +.+|+.|.. ...+-.-..+.++|...|..+..+-|...+++....++..++++++++.
T Consensus 50 ~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 50 MIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 333444555 467776655 4445556667778888999998888887778889999999999999985
No 167
>PRK06188 acyl-CoA synthetase; Validated
Probab=56.21 E-value=1.1e+02 Score=31.19 Aligned_cols=82 Identities=9% Similarity=-0.042 Sum_probs=60.7
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+|+ .+...+.... ...++..+|++...+|-...+...+++.+..|+..+... ...++.+.+.+++.++.+++...
T Consensus 188 ~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 263 (524)
T PRK06188 188 GTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFLVP 263 (524)
T ss_pred eehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEehH
Confidence 677 7665554333 345788899999888877666666777888888777664 46688899999999999999887
Q ss_pred hhHHHHH
Q psy8225 149 ELSEALT 155 (479)
Q Consensus 149 ~~~~~~~ 155 (479)
.....+.
T Consensus 264 ~~l~~l~ 270 (524)
T PRK06188 264 TMIYALL 270 (524)
T ss_pred HHHHHHH
Confidence 6655443
No 168
>PLN03052 acetate--CoA ligase; Provisional
Probab=56.19 E-value=1.4e+02 Score=32.00 Aligned_cols=97 Identities=15% Similarity=0.101 Sum_probs=67.5
Q ss_pred CCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-C
Q psy8225 207 PSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-S 282 (479)
Q Consensus 207 ~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~ 282 (479)
++.++++.-..+..+.+ ...+|...+...+..+.. ..+++++|++...+|..--+ +..+++++..|+..+.. +
T Consensus 189 pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 189 DDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeCC
Confidence 45565543322221222 245788888766655543 45789999999999976543 46677888889887765 4
Q ss_pred CCChhHHHHHHHHhcccEEEEehH
Q psy8225 283 KFSASNFWKDCIKYNCTVAQYIGE 306 (479)
Q Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~p~ 306 (479)
.+.++.+...+++.++.++++...
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 688999999999999999887653
No 169
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=56.17 E-value=50 Score=31.37 Aligned_cols=61 Identities=13% Similarity=0.071 Sum_probs=47.3
Q ss_pred HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 84 FFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 84 ~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
.|++.+++||++|+|+.--+.-.++..+|-..- +.++.++.+. +-....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 455678999999999999999999999988655 7777776543 334456777888888865
No 170
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=55.65 E-value=1.4e+02 Score=30.54 Aligned_cols=97 Identities=12% Similarity=0.029 Sum_probs=71.7
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQ--PEYVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.+|++.. +|+ .+...+..+...+... +++.|++...+|-. .-+...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 4777888876 899 9888866666666432 78888878788743 444666777788898888776
Q ss_pred C-CcchHHHHHHHHhccceEEEeChhhHHHHHHh
Q psy8225 125 T-NQRQHILIHSIKVAECKAIIYGAELSEALTEV 157 (479)
Q Consensus 125 ~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 157 (479)
+ .+.++.+...++..++..+..-......+...
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~ 281 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDN 281 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHHHHhC
Confidence 5 68888899999988888888777766654443
No 171
>PLN02654 acetate-CoA ligase
Probab=54.31 E-value=1.6e+02 Score=31.12 Aligned_cols=79 Identities=16% Similarity=0.160 Sum_probs=61.5
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-CCCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-SKFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...|...+..+.. ..+++++|++...+|..--+ +..+++++..|+..+.. +.+.++.+...+++.++.++
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~--v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~l 196 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL--PIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVV 196 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEE
Confidence 46888888776665544 56789999999999876543 56678888899988765 46788999999999999998
Q ss_pred EEehH
Q psy8225 302 QYIGE 306 (479)
Q Consensus 302 ~~~p~ 306 (479)
++...
T Consensus 197 i~~~~ 201 (666)
T PLN02654 197 ITCNA 201 (666)
T ss_pred EEcCc
Confidence 87654
No 172
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=54.15 E-value=44 Score=27.08 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCC---chHHHHHHHHhhhcCceee
Q psy8225 78 SNRIANFFKSKGLQRGDAVALFMEG---QPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 78 ~~~la~~L~~~gi~~gd~V~i~~~n---~~e~~~~~lA~~~~G~~~v 121 (479)
.+.+.+.|.+.|+.+++.|.+++.. +.....+++.+..+|..-+
T Consensus 80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 4578888999999999999999875 6667777888888886543
No 173
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=53.74 E-value=1.3e+02 Score=30.35 Aligned_cols=93 Identities=10% Similarity=-0.031 Sum_probs=65.2
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.++++.. +|+ .+...+.... ....+++++|++...++-... +...+++.+..|+.++..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 3566776665 777 7765543322 233488999998877775543 3345566778888887777
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
.......+...+++.++.+++........+
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~ 266 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYAAM 266 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHHHH
Confidence 666788999999999999999987655433
No 174
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=53.49 E-value=1.5e+02 Score=31.04 Aligned_cols=96 Identities=14% Similarity=0.053 Sum_probs=67.5
Q ss_pred CCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 206 KPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 206 ~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
.++.++++.. +.. ......+|.+.+...+..+.. ..+++++|++...+|-.-.+ +..+++++..|+..+...
T Consensus 80 ~p~~~Al~~~-~~~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWE-GDD--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEE-CCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecC
Confidence 4566665532 211 112456899888876665554 45788999999888865443 456778888899888665
Q ss_pred -CCChhHHHHHHHHhcccEEEEehH
Q psy8225 283 -KFSASNFWKDCIKYNCTVAQYIGE 306 (479)
Q Consensus 283 -~~~~~~~~~~i~~~~~t~~~~~p~ 306 (479)
.+.+.++...+++.++.++++...
T Consensus 155 ~~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 GGFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcCc
Confidence 578889999999999999887543
No 175
>PRK09274 peptide synthase; Provisional
Probab=53.46 E-value=1.2e+02 Score=31.20 Aligned_cols=78 Identities=6% Similarity=-0.143 Sum_probs=57.9
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..+++++|++...++-+.. +...+++++..|+..+... ....+++...+++.++..+
T Consensus 40 ~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 117 (552)
T PRK09274 40 DELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE--FFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAF 117 (552)
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH--HHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEE
Confidence 35788888776665544 4478899999988876544 3466778889999888765 4677788888888888887
Q ss_pred EEeh
Q psy8225 302 QYIG 305 (479)
Q Consensus 302 ~~~p 305 (479)
...+
T Consensus 118 i~~~ 121 (552)
T PRK09274 118 IGIP 121 (552)
T ss_pred Eecc
Confidence 7643
No 176
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=53.23 E-value=1.7e+02 Score=30.62 Aligned_cols=96 Identities=15% Similarity=0.085 Sum_probs=67.6
Q ss_pred CCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 206 KPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 206 ~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
.++.++++.. ...+|. ...+|...+...+..+.. ..+++++|++...+|..-.+ +..+++++..|+..+...
T Consensus 70 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWE-GDEPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEeccC
Confidence 4556666532 221222 346888888766655543 45789999999998866543 466778888899877654
Q ss_pred -CCChhHHHHHHHHhcccEEEEehH
Q psy8225 283 -KFSASNFWKDCIKYNCTVAQYIGE 306 (479)
Q Consensus 283 -~~~~~~~~~~i~~~~~t~~~~~p~ 306 (479)
.+.++.+...+++.++.++++...
T Consensus 145 ~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 678889999999999999887653
No 177
>PRK08316 acyl-CoA synthetase; Validated
Probab=53.06 E-value=1.4e+02 Score=30.21 Aligned_cols=81 Identities=6% Similarity=0.051 Sum_probs=58.5
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEe
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIY 146 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 146 (479)
+|+ .+... .+......+++++|++...+|-... +...+++++..|+.+++.. ...++.+...+++.++.++++
T Consensus 191 ~s~~~l~~~---~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 266 (523)
T PRK08316 191 LTHRALIAE---YVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSFFA 266 (523)
T ss_pred EecHHHHHH---HHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEEEe
Confidence 788 76554 3344455589999998888775432 3344667788899888764 457888999999999999998
Q ss_pred ChhhHHHH
Q psy8225 147 GAELSEAL 154 (479)
Q Consensus 147 ~~~~~~~~ 154 (479)
.......+
T Consensus 267 ~P~~~~~l 274 (523)
T PRK08316 267 PPTVWISL 274 (523)
T ss_pred CHHHHHHH
Confidence 87665444
No 178
>PRK07529 AMP-binding domain protein; Validated
Probab=52.96 E-value=1.4e+02 Score=31.26 Aligned_cols=96 Identities=13% Similarity=0.052 Sum_probs=64.7
Q ss_pred CCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 206 KPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 206 ~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
.++.++++....+.. ..+...+|...+...+..+.. ..+++++|++...+|-...+ ...+++++..|..+.+.+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGIANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEEEeCCC
Confidence 455666655432211 123456888888766555443 45789999999998865543 456677777785443445
Q ss_pred CCChhHHHHHHHHhcccEEEEe
Q psy8225 283 KFSASNFWKDCIKYNCTVAQYI 304 (479)
Q Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~ 304 (479)
...++.+...+++.++..++..
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 6788899999999999998875
No 179
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=52.48 E-value=1.4e+02 Score=30.38 Aligned_cols=92 Identities=10% Similarity=-0.027 Sum_probs=65.0
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH---HHHHHhhhcCceeeee
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYV---CMWLGLSKIGVVAAFI 123 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~---~~~lA~~~~G~~~v~l 123 (479)
.++.+|++.. +|. .+...+..... ..+++++|++...+|-...+- ...++++..|+.++..
T Consensus 180 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 180 PADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 4566777654 788 88776665433 347889999988877654332 2467788889887754
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHHH
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEALT 155 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 155 (479)
+...+..+...+++.++.++.........+.
T Consensus 257 -~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~ 287 (536)
T PRK10946 257 -PDPSATLCFPLIEKHQVNVTALVPPAVSLWL 287 (536)
T ss_pred -CCCCHHHHHHHHHHhCCcEEEeChHHHHHHH
Confidence 4556777888999999999998877665543
No 180
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=51.98 E-value=1.2e+02 Score=28.18 Aligned_cols=65 Identities=8% Similarity=0.025 Sum_probs=47.7
Q ss_pred HHHHcC-CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 84 FFKSKG-LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 84 ~L~~~g-i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
...+.| +.+|++| +....+-.-..+.+++.+.|..+..+-|...++.....++..++++++++..
T Consensus 47 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 47 DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 344456 4677766 4444444556666777889999888888777677788999999999999764
No 181
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=51.92 E-value=1.5e+02 Score=30.27 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=65.5
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.+|++.. +|+ .+...+.... ...+++++|++....+-... ++..+++.+..|+.++..
T Consensus 195 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~- 270 (547)
T PRK13295 195 GPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYA---ERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQ- 270 (547)
T ss_pred CCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHH---HHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeC-
Confidence 4466777765 788 7766555433 34478899998888876533 355577788899887754
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEALT 155 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 155 (479)
+....+.+...+++.++.+++........+.
T Consensus 271 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 301 (547)
T PRK13295 271 DIWDPARAAELIRTEGVTFTMASTPFLTDLT 301 (547)
T ss_pred CCCCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 4567889999999999999888766554443
No 182
>PLN02246 4-coumarate--CoA ligase
Probab=51.86 E-value=1.1e+02 Score=31.25 Aligned_cols=94 Identities=10% Similarity=0.011 Sum_probs=64.8
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchHH--HHHHHHhhhcCceeeee
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFK-SKGLQRGDAVALFMEGQPEY--VCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~-~~gi~~gd~V~i~~~n~~e~--~~~~lA~~~~G~~~v~l 123 (479)
.|+.++++.. +|+ .+............ ..++.++|++....|-...+ ...+++.+..|+.++..
T Consensus 177 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 256 (537)
T PLN02246 177 SPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIM 256 (537)
T ss_pred CccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEe
Confidence 4566777664 788 77665544333222 34788999998877754322 34467788899988877
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHH
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
. ....+++...++..++.++.........+
T Consensus 257 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 286 (537)
T PLN02246 257 P-KFEIGALLELIQRHKVTIAPFVPPIVLAI 286 (537)
T ss_pred C-CCCHHHHHHHHHHhCceEEEcchHHHHHH
Confidence 5 46778899999999999988877654443
No 183
>KOG1176|consensus
Probab=51.53 E-value=74 Score=32.60 Aligned_cols=85 Identities=12% Similarity=-0.052 Sum_probs=64.7
Q ss_pred eEEeehHHHHHHhhhhhhhc-----CCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcc
Q psy8225 225 AAVMTHVRAMFMAISGRYQT-----GLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNC 298 (479)
Q Consensus 225 ~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~ 298 (479)
+..+|+..+...+..++..+ +.+++|++....|-+..+. ...++++..|+.+.-.. .++..++...+...++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~--~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ 120 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV--ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKP 120 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCccccccCcccCHHHHHHHHHhcCC
Confidence 67899988887776665543 3688999999999776543 44567888888877554 5788899999999999
Q ss_pred cEEEEehHHHHHH
Q psy8225 299 TVAQYIGEMCRYL 311 (479)
Q Consensus 299 t~~~~~p~~l~~l 311 (479)
++++.....+..+
T Consensus 121 kiif~d~~~~~~i 133 (537)
T KOG1176|consen 121 KLIFVDEDFYDKI 133 (537)
T ss_pred eEEEEcCchHHHH
Confidence 9998876665544
No 184
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=51.39 E-value=1.5e+02 Score=27.97 Aligned_cols=62 Identities=13% Similarity=0.193 Sum_probs=47.9
Q ss_pred HcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 87 SKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 87 ~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
+.|..+++.|...+ .+-.-..+.++|...|..++.+-|...+.+....++..++++++++..
T Consensus 45 ~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 45 KQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 33444566665555 455566777888899999999988888888899999999999999765
No 185
>PLN03013 cysteine synthase
Probab=50.87 E-value=1.3e+02 Score=29.86 Aligned_cols=66 Identities=9% Similarity=-0.015 Sum_probs=51.1
Q ss_pred HHHHcC-CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 84 FFKSKG-LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 84 ~L~~~g-i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
...+.| +++|....+....+-.-+...++|...|..++.+-|...+++....++..++++++++..
T Consensus 164 ~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 164 DAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 344455 577855555556666667777888889999988888888889999999999999999754
No 186
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=50.73 E-value=17 Score=32.30 Aligned_cols=26 Identities=15% Similarity=0.083 Sum_probs=18.1
Q ss_pred CcEEEcCCeeEEe----------cCCcEEEecCCCC
Q psy8225 452 DAAFNTGDILIKD----------KFQYFYFKDRTGD 477 (479)
Q Consensus 452 ~g~~~TGD~g~~d----------~dG~l~~~GR~~d 477 (479)
.||+.+.++||.. ..|++||+.+..|
T Consensus 188 TGYVA~~~~GY~RI~~mK~~G~~~GGRvffv~~~~d 223 (239)
T PF03744_consen 188 TGYVASKKFGYHRITNMKEAGSPKGGRVFFVDGSID 223 (239)
T ss_pred eEEEEeCCcceEECccccccCCCCCCEEEEEeCCCC
Confidence 5777777777651 2488998887654
No 187
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=50.68 E-value=1.4e+02 Score=29.83 Aligned_cols=83 Identities=11% Similarity=0.016 Sum_probs=59.6
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEY-VCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
+|+ ++...+.... ...+++++|++...+|-...+ +..+++.+..|+.++.. +..++.++...+++.++.++...
T Consensus 161 ~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~ 236 (483)
T PRK03640 161 QTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLV-EKFDAEKINKLLQTGGVTIISVV 236 (483)
T ss_pred EecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEec-CCCCHHHHHHHHHHhCCcEEEeH
Confidence 788 7765443332 235889999999888753222 33456777788887755 45788999999999999999998
Q ss_pred hhhHHHHHH
Q psy8225 148 AELSEALTE 156 (479)
Q Consensus 148 ~~~~~~~~~ 156 (479)
......+..
T Consensus 237 P~~~~~l~~ 245 (483)
T PRK03640 237 STMLQRLLE 245 (483)
T ss_pred HHHHHHHHh
Confidence 877665543
No 188
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=50.06 E-value=54 Score=31.61 Aligned_cols=89 Identities=16% Similarity=0.144 Sum_probs=54.8
Q ss_pred HHHHHHH-hhcCCCccccEEEEehhhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC--
Q psy8225 50 RPLFVRT-IREVPMTGAYKYTVTFQVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN-- 126 (479)
Q Consensus 50 ~~~l~~~-~~~~p~~~a~~~~~Ty~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~-- 126 (479)
.+.|++. ++....+-|+.. ..-...+--.|...|+++||.|++-.- -+..+.-|+..+|+.++.++-+
T Consensus 27 ~~~fE~~~a~~~g~~~~~~~------~sgt~Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 27 VEEFEKEFAEYFGVKYAVAV------SSGTSALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHTSSEEEEE------SSHHHHHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETT
T ss_pred HHHHHHHHHHHhCCCeEEEe------CChhHHHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCC
Confidence 3444443 444444444444 234555666778889999999888754 4556678889999999988543
Q ss_pred ---cchHHHHHHHHhccceEEEeCh
Q psy8225 127 ---QRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 127 ---~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
.+++.+...+.. +.++|+..+
T Consensus 98 ~~~id~~~~~~~i~~-~t~ai~~~h 121 (363)
T PF01041_consen 98 TLNIDPEALEKAITP-KTKAILVVH 121 (363)
T ss_dssp TSSB-HHHHHHHHHT-TEEEEEEE-
T ss_pred cCCcCHHHHHHHhcc-CccEEEEec
Confidence 567777777664 346776643
No 189
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.93 E-value=1.2e+02 Score=30.93 Aligned_cols=84 Identities=12% Similarity=-0.024 Sum_probs=57.6
Q ss_pred Eeh-hhHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchHH-HHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEe
Q psy8225 70 VTF-QVEDHSNRIANFFK-SKGLQRGDAVALFMEGQPEY-VCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIY 146 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~-~~gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 146 (479)
+|. .+.... .+..+. ..++.++|++..+.|-...+ ....++++..|+.++...+....+.+..++++.++..+..
T Consensus 196 ~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~ 273 (539)
T PRK07008 196 YSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAG 273 (539)
T ss_pred EecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEe
Confidence 677 664322 222332 34788899888777643222 3334677889988887777788899999999999999988
Q ss_pred ChhhHHHHH
Q psy8225 147 GAELSEALT 155 (479)
Q Consensus 147 ~~~~~~~~~ 155 (479)
.......+.
T Consensus 274 ~P~~~~~l~ 282 (539)
T PRK07008 274 VPTVWLGLL 282 (539)
T ss_pred chHHHHHHH
Confidence 776655443
No 190
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=49.73 E-value=60 Score=31.56 Aligned_cols=63 Identities=17% Similarity=0.156 Sum_probs=40.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC-----cchHHHHHHHHhccceEEEeC
Q psy8225 81 IANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN-----QRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 81 la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 147 (479)
+...+...++++||.|.+-.+ .|.....++...|+.++.++.+ ...+++...+.. +.++|+..
T Consensus 59 L~~~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 59 LEMAALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 334455557899999887554 4555566777889988887543 345666665543 56777653
No 191
>PLN02736 long-chain acyl-CoA synthetase
Probab=49.50 E-value=1.1e+02 Score=32.26 Aligned_cols=85 Identities=13% Similarity=-0.087 Sum_probs=63.8
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-CCCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-SKFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..+++++|++...++-..-+ +..+++++..|+.++.. +.+.++++...+++.++.++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l 154 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAI 154 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEE
Confidence 34788888776655543 45789999998888765543 45567888889888855 46788899999999999999
Q ss_pred EEehHHHHHHh
Q psy8225 302 QYIGEMCRYLL 312 (479)
Q Consensus 302 ~~~p~~l~~l~ 312 (479)
+..+..+..+.
T Consensus 155 ~~~~~~~~~~~ 165 (651)
T PLN02736 155 FCVPQTLNTLL 165 (651)
T ss_pred EECHHHHHHHH
Confidence 98877665543
No 192
>PRK07788 acyl-CoA synthetase; Validated
Probab=49.27 E-value=1.8e+02 Score=29.73 Aligned_cols=83 Identities=6% Similarity=-0.033 Sum_probs=58.1
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEY-VCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
+|+ .+...+.. .....++.++|++....|-...+ +..++.++..|+.++.. ....++++...+++.++..++..
T Consensus 227 ~s~~~~~~~~~~---~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~~ 302 (549)
T PRK07788 227 RPEPSPLAPLAG---LLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALVVV 302 (549)
T ss_pred ccCccHHHHHHH---HHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEEEH
Confidence 677 77554433 33445788899888777754333 23355677788877655 56778899999999999999998
Q ss_pred hhhHHHHHH
Q psy8225 148 AELSEALTE 156 (479)
Q Consensus 148 ~~~~~~~~~ 156 (479)
......+.+
T Consensus 303 P~~~~~l~~ 311 (549)
T PRK07788 303 PVMLSRILD 311 (549)
T ss_pred HHHHHHHHh
Confidence 877665544
No 193
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=48.39 E-value=1.5e+02 Score=27.63 Aligned_cols=65 Identities=12% Similarity=0.075 Sum_probs=48.1
Q ss_pred HHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 84 FFKSKGL-QRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 84 ~L~~~gi-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
.+++.|. .+|+.|. ....+-.-..+.++|.+.|..+..+-|...++.....++..++++++++..
T Consensus 48 ~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 48 DAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3444453 6777664 455555566667788889999988888877777788999999999999754
No 194
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=48.17 E-value=1.6e+02 Score=29.88 Aligned_cols=94 Identities=10% Similarity=-0.061 Sum_probs=65.5
Q ss_pred cCCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH---HHHHhhhcCceeee
Q psy8225 59 EVPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVC---MWLGLSKIGVVAAF 122 (479)
Q Consensus 59 ~~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~---~~lA~~~~G~~~v~ 122 (479)
..++.+|++.. +|+ .+...+.... ...++.++|++...+|-...+-. ..++++..|+..+.
T Consensus 180 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~ 256 (527)
T TIGR02275 180 TKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVL 256 (527)
T ss_pred CCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEE
Confidence 34567777765 788 7766554433 34578889999888876543322 35777888887765
Q ss_pred ecCCcchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
.+...+..+...+++.++.++.........+..
T Consensus 257 -~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 289 (527)
T TIGR02275 257 -APDPSPTDCFPLIERHKVTVTALVPPAVALWMQ 289 (527)
T ss_pred -CCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHh
Confidence 445677788889999999999998876655433
No 195
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=47.61 E-value=1.5e+02 Score=30.92 Aligned_cols=93 Identities=17% Similarity=0.167 Sum_probs=68.9
Q ss_pred hcCCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHH-HHhhhcCceeeee
Q psy8225 58 REVPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMW-LGLSKIGVVAAFI 123 (479)
Q Consensus 58 ~~~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~-lA~~~~G~~~v~l 123 (479)
...|+..|.+.. +|| .+...+..+...+. -++++|++.-++|=..=+--++ .++...|.+.+..
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~ 264 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLF 264 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEe
Confidence 457888888877 999 99999988888775 3889999999999765554443 5555555544443
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHH
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
..+...+..-++..+|.+++.-+...+.+
T Consensus 265 --~~~~~~~~~dl~~~rPt~m~~VPRvwE~i 293 (613)
T COG1022 265 --KEDPRTLLEDLKEVRPTVMIGVPRVWEKV 293 (613)
T ss_pred --cCCHHHHHHHHHHhCCeEEeechHHHHHH
Confidence 34567888899999999999876554443
No 196
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=47.45 E-value=1.7e+02 Score=30.41 Aligned_cols=91 Identities=12% Similarity=0.118 Sum_probs=63.8
Q ss_pred CCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH--HHHHHHhhhcCceeeeecC
Q psy8225 61 PMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEY--VCMWLGLSKIGVVAAFINT 125 (479)
Q Consensus 61 p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~--~~~~lA~~~~G~~~v~l~~ 125 (479)
++.++++.. +|+ .+...+..+... .++.++|++...+|-...+ ...+++.+..|+.++ +.+
T Consensus 198 ~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v-~~~ 273 (600)
T PRK08279 198 AKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLA-LRR 273 (600)
T ss_pred ccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEE-EcC
Confidence 456666665 788 887776665544 4788999998888765433 334556666777665 456
Q ss_pred CcchHHHHHHHHhccceEEEeChhhHHHHH
Q psy8225 126 NQRQHILIHSIKVAECKAIIYGAELSEALT 155 (479)
Q Consensus 126 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 155 (479)
.+....+...+++.++.++.........+.
T Consensus 274 ~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~ 303 (600)
T PRK08279 274 KFSASRFWDDVRRYRATAFQYIGELCRYLL 303 (600)
T ss_pred CCCHHHHHHHHHHhcceEEeehHHHHHHHH
Confidence 778888889999999999887766554443
No 197
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=47.14 E-value=1.6e+02 Score=30.10 Aligned_cols=96 Identities=15% Similarity=0.009 Sum_probs=69.0
Q ss_pred CcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh----hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-CC
Q psy8225 209 DKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY----QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-SK 283 (479)
Q Consensus 209 ~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~ 283 (479)
+...++|-+-.++. -.+|.+.|...+..+.. ..+. ++|++...+|..-.. ...++++...|+..... +.
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~--~~a~LA~~riGAI~~~vf~~ 98 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA--VIALLATARIGAIPAVVSPG 98 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH--HHHHHHHHHcCCEEeecccC
Confidence 44556665554444 56788777765554443 3446 999999999987654 45677888888876644 57
Q ss_pred CChhHHHHHHHHhcccEEEEehHHHHH
Q psy8225 284 FSASNFWKDCIKYNCTVAQYIGEMCRY 310 (479)
Q Consensus 284 ~~~~~~~~~i~~~~~t~~~~~p~~l~~ 310 (479)
|.++.+...+.+.++.++.+....++.
T Consensus 99 f~~~al~~Ri~d~~~k~vit~d~~~~~ 125 (528)
T COG0365 99 LSAEAVADRIADLGPKVLIADDGTFRN 125 (528)
T ss_pred CCHHHHHHHHHccCCCEEEEecccccc
Confidence 899999999999999999877766553
No 198
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=46.84 E-value=2.2e+02 Score=33.05 Aligned_cols=92 Identities=10% Similarity=0.007 Sum_probs=66.0
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH-HHHHhhhcCceeeeecC
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVC-MWLGLSKIGVVAAFINT 125 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~-~~lA~~~~G~~~v~l~~ 125 (479)
.|+.+|++.. +|. .+........ ...+++++|++....+-+.+.-+ .+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 4667777765 777 7766554333 33488999999988887665533 45677788988887654
Q ss_pred --CcchHHHHHHHHhccceEEEeChhhHHHH
Q psy8225 126 --NQRQHILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 126 --~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
...++.+.+.+++.++.++.........+
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 34678899999999999998877665544
No 199
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=46.81 E-value=2.3e+02 Score=29.64 Aligned_cols=94 Identities=12% Similarity=0.028 Sum_probs=65.5
Q ss_pred CCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhh---hhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-
Q psy8225 207 PSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGR---YQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS- 282 (479)
Q Consensus 207 ~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~- 282 (479)
++.++++ +-+..+|. .-.+|...+...+..+. ...+++++|++...+|..-- .+..+++++..|+..+...
T Consensus 66 p~~~Al~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e--~v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 66 GEQLALV-TVSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE--AVFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEecCC
Confidence 4555554 43322232 23578888876665544 34589999999999887543 3466778888898877654
Q ss_pred CCChhHHHHHHHHhcccEEEEeh
Q psy8225 283 KFSASNFWKDCIKYNCTVAQYIG 305 (479)
Q Consensus 283 ~~~~~~~~~~i~~~~~t~~~~~p 305 (479)
.+...++...++..++.++++..
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 67888999999999999888754
No 200
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=46.54 E-value=61 Score=29.44 Aligned_cols=113 Identities=18% Similarity=0.161 Sum_probs=60.5
Q ss_pred hhcCCCccccEEEEeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce-eeeecCCcchHH---
Q psy8225 57 IREVPMTGAYKYTVTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV-AAFINTNQRQHI--- 131 (479)
Q Consensus 57 ~~~~p~~~a~~~~~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~-~v~l~~~~~~~~--- 131 (479)
.+..|+.-.... -.+ ++.++.+.+...+++.--.-..+..+...+...++.-.+++-..+.. ..+ .-..++++
T Consensus 113 ~~~~P~~~~~y~-~N~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~-~~~ps~~~l~~ 190 (256)
T PF01297_consen 113 SELDPANKDYYE-KNAEKYLKELDELDAEIKEKLAKLPGRPVVVYHDAFQYFAKRYGLKVIGVIEISP-GEEPSPKDLAE 190 (256)
T ss_dssp HHHTGGGHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSSGGEEEEEESTTHHHHHHTT-EEEEEESSSS-SSSS-HHHHHH
T ss_pred HHhCccchHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCCeEEEEChHHHHHHHhcCCceeeeecccc-ccCCCHHHHHH
Confidence 334555444322 234 55555555555555441111226778888899999888887776654 111 22334444
Q ss_pred HHHHHHhccceEEEeChhhHHHHHHhhccCCcceEEecCC
Q psy8225 132 LIHSIKVAECKAIIYGAELSEALTEVKDSIPGISLYAAGT 171 (479)
Q Consensus 132 l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (479)
+...++..++++||++........+....-.+++++.++.
T Consensus 191 l~~~ik~~~v~~i~~e~~~~~~~~~~la~~~g~~vv~ld~ 230 (256)
T PF01297_consen 191 LIKLIKENKVKCIFTEPQFSSKLAEALAKETGVKVVYLDP 230 (256)
T ss_dssp HHHHHHHTT-SEEEEETTS-THHHHHHHHCCT-EEEESST
T ss_pred HHHHhhhcCCcEEEecCCCChHHHHHHHHHcCCcEEEeCC
Confidence 4556688899999998765544333333323455555443
No 201
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=46.48 E-value=1.1e+02 Score=32.24 Aligned_cols=78 Identities=17% Similarity=0.050 Sum_probs=59.8
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..+++++|++...+|..--+ ...+++++..|+..+... .+..+.+...+++.++.++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~l 190 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLL 190 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEE
Confidence 45788888776665544 45789999999999876543 456778888898877654 6788899999999999888
Q ss_pred EEeh
Q psy8225 302 QYIG 305 (479)
Q Consensus 302 ~~~p 305 (479)
++..
T Consensus 191 i~~~ 194 (652)
T TIGR01217 191 FTVD 194 (652)
T ss_pred EEcc
Confidence 7654
No 202
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=46.17 E-value=2.4e+02 Score=29.78 Aligned_cols=93 Identities=8% Similarity=-0.058 Sum_probs=62.6
Q ss_pred CCccccEEE------------Eeh-hhHHH-HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecC-
Q psy8225 61 PMTGAYKYT------------VTF-QVEDH-SNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINT- 125 (479)
Q Consensus 61 p~~~a~~~~------------~Ty-~l~~~-~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~- 125 (479)
++.++++.. +|+ .+... ..... ...+++++|++....+.+......+++.+..|+..+..+.
T Consensus 262 ~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~ 338 (655)
T PRK03584 262 FDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELG---LHCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGS 338 (655)
T ss_pred CCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHH---HhcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCC
Confidence 466777665 676 55322 22221 2347889998877766655444456788899998887653
Q ss_pred --CcchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 126 --NQRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 126 --~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
...++.+.+++++.++..+.+.......+.+
T Consensus 339 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 371 (655)
T PRK03584 339 PFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEK 371 (655)
T ss_pred CCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHh
Confidence 2357888999999999999888776655543
No 203
>PRK05857 acyl-CoA synthetase; Validated
Probab=46.10 E-value=1.7e+02 Score=29.85 Aligned_cols=80 Identities=9% Similarity=-0.008 Sum_probs=59.7
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..++++++++...++-+..+ +..+++++..|+..+..+ .+..+++...++..++..+
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~i 117 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET--YLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAA 117 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceE
Confidence 35788888776665554 34688999998888766543 456778889999988765 4677888888888888888
Q ss_pred EEehHH
Q psy8225 302 QYIGEM 307 (479)
Q Consensus 302 ~~~p~~ 307 (479)
+..+..
T Consensus 118 i~~~~~ 123 (540)
T PRK05857 118 LVAPGS 123 (540)
T ss_pred EEeccc
Confidence 776643
No 204
>PRK07470 acyl-CoA synthetase; Validated
Probab=46.07 E-value=1.9e+02 Score=29.29 Aligned_cols=96 Identities=9% Similarity=-0.032 Sum_probs=61.4
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeec-C
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFIN-T 125 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~-~ 125 (479)
.++.++++.. +|+ .+...+......+. .++.++|++...+|-...+-...+..+..|+.++.+. .
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 3456777665 788 77543332211111 2577888888888866544333344445565554443 4
Q ss_pred CcchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 126 NQRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 126 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
..+++++...+++.++.+++........+.+
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 5678899999999999999998877765543
No 205
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=46.01 E-value=78 Score=30.69 Aligned_cols=59 Identities=15% Similarity=0.103 Sum_probs=39.6
Q ss_pred HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC-----cchHHHHHHHHhccceEEEe
Q psy8225 84 FFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN-----QRQHILIHSIKVAECKAIIY 146 (479)
Q Consensus 84 ~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 146 (479)
.+...++++||.|.+-.+..+ ....++...|+.++.++.+ ...+++...+.. +.++|+.
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HHHHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 344457889999888665544 4456677889988877532 456777777654 5677764
No 206
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.16 E-value=1.9e+02 Score=29.82 Aligned_cols=94 Identities=14% Similarity=-0.052 Sum_probs=63.8
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHhhhcCceeeeecC
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEY-VCMWLGLSKIGVVAAFINT 125 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~v~l~~ 125 (479)
.++.++++.. +|+ .+...+..+. .....++.+++++...+|-...+ ....++.+..|...+...+
T Consensus 179 ~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 179 DETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred CccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 4466677665 677 7754443321 12234788899998887755443 3345677778887776666
Q ss_pred CcchHHHHHHHHhccceEEEeChhhHHHH
Q psy8225 126 NQRQHILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 126 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
...++.+...+++.++.+++........+
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPTLWIQL 286 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCHHHHHH
Confidence 67888999999999999999877655433
No 207
>PRK05852 acyl-CoA synthetase; Validated
Probab=45.13 E-value=2.4e+02 Score=28.70 Aligned_cols=84 Identities=15% Similarity=0.097 Sum_probs=59.6
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--HHHHHHHHhhhcCceeee-ecCCcchHHHHHHHHhccceEEE
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQP--EYVCMWLGLSKIGVVAAF-INTNQRQHILIHSIKVAECKAII 145 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~vi 145 (479)
+|+ .+...+..+...+ +++++|++....|-.. .++..+++++..|...+. -...+.+..+...+++.++..++
T Consensus 196 ~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 272 (534)
T PRK05852 196 WTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYT 272 (534)
T ss_pred ecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEE
Confidence 788 8876666655444 6888998887777543 345567777777776543 23346677888999999999999
Q ss_pred eChhhHHHHHH
Q psy8225 146 YGAELSEALTE 156 (479)
Q Consensus 146 ~~~~~~~~~~~ 156 (479)
........+.+
T Consensus 273 ~~P~~~~~l~~ 283 (534)
T PRK05852 273 AVPTIHQILLE 283 (534)
T ss_pred cChHHHHHHHh
Confidence 88876665544
No 208
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=45.09 E-value=1.1e+02 Score=21.78 Aligned_cols=63 Identities=10% Similarity=0.210 Sum_probs=49.5
Q ss_pred Eeh-hhHHHHHHHHH---HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceE
Q psy8225 70 VTF-QVEDHSNRIAN---FFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKA 143 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~---~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 143 (479)
.|| +|.+.-+.+++ +|....++..|.|+|+.-++... .-++.+....+.+++..-++..++++
T Consensus 10 ~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 10 ATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred eeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 689 98888777665 56666788889999998877432 45677888889999999999888765
No 209
>KOG3111|consensus
Probab=44.96 E-value=1.9e+02 Score=24.91 Aligned_cols=95 Identities=11% Similarity=0.191 Sum_probs=55.3
Q ss_pred chhHHHHHHHhhcCCCccccEEE---------------------Eeh--hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCc
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---------------------VTF--QVEDHSNRIANFFKSKGLQRGDAVALFMEGQ 103 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---------------------~Ty--~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~ 103 (479)
.|+...+-+..+++-+++.+.+. +|| |..+...++.+.+++.|++.|
T Consensus 47 iT~G~pvV~slR~~~~~~~ffD~HmMV~~Peq~V~~~a~agas~~tfH~E~~q~~~~lv~~ir~~Gmk~G---------- 116 (224)
T KOG3111|consen 47 ITFGPPVVESLRKHTGADPFFDVHMMVENPEQWVDQMAKAGASLFTFHYEATQKPAELVEKIREKGMKVG---------- 116 (224)
T ss_pred cccchHHHHHHHhccCCCcceeEEEeecCHHHHHHHHHhcCcceEEEEEeeccCHHHHHHHHHHcCCeee----------
Confidence 34566666666665555544443 676 776778888888888887754
Q ss_pred hHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC------h----hhHHHHHHhhccCCcceEEe
Q psy8225 104 PEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG------A----ELSEALTEVKDSIPGISLYA 168 (479)
Q Consensus 104 ~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~------~----~~~~~~~~~~~~~~~~~~~~ 168 (479)
+.|.|..+.+.+..+++..+--+|-+- + +..+.++.+....|.+.+-+
T Consensus 117 -----------------~alkPgT~Ve~~~~~~~~~D~vLvMtVePGFGGQkFme~mm~KV~~lR~kyp~l~iev 174 (224)
T KOG3111|consen 117 -----------------LALKPGTPVEDLEPLAEHVDMVLVMTVEPGFGGQKFMEDMMPKVEWLREKYPNLDIEV 174 (224)
T ss_pred -----------------EEeCCCCcHHHHHHhhccccEEEEEEecCCCchhhhHHHHHHHHHHHHHhCCCceEEe
Confidence 335666666666666664443333331 1 23345555555666555533
No 210
>PRK06839 acyl-CoA synthetase; Validated
Probab=44.78 E-value=1.8e+02 Score=29.10 Aligned_cols=83 Identities=6% Similarity=-0.160 Sum_probs=62.4
Q ss_pred EEeehHHHHHHhhhhhhh----cCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccE
Q psy8225 226 AVMTHVRAMFMAISGRYQ----TGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTV 300 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~~----~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 300 (479)
..+|...+...+..+... .++.+++++...++-+.. +...+++++..|+..+..+ ...+..+...+++.+++.
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 467888887766655543 467889999888876654 3566778888899888765 467888888899999999
Q ss_pred EEEehHHHHH
Q psy8225 301 AQYIGEMCRY 310 (479)
Q Consensus 301 ~~~~p~~l~~ 310 (479)
++..+.....
T Consensus 104 i~~~~~~~~~ 113 (496)
T PRK06839 104 LFVEKTFQNM 113 (496)
T ss_pred EEEcHHHHHH
Confidence 9887766544
No 211
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.68 E-value=1.4e+02 Score=30.40 Aligned_cols=83 Identities=13% Similarity=-0.027 Sum_probs=60.9
Q ss_pred EeehHHHHHHhhhhhh---hc-CCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 227 VMTHVRAMFMAISGRY---QT-GLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~-~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
.+|...+...+..+.. .. ++.+++++...++-.- .++..+++++..|+..+..+ .....++...+++.++..+
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 112 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVA 112 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEE
Confidence 4788777666555443 33 7889999988877543 34567788899999888665 5678888899999999998
Q ss_pred EEehHHHHHH
Q psy8225 302 QYIGEMCRYL 311 (479)
Q Consensus 302 ~~~p~~l~~l 311 (479)
...+.....+
T Consensus 113 i~~~~~~~~~ 122 (546)
T PRK08314 113 IVGSELAPKV 122 (546)
T ss_pred EEccchhhhH
Confidence 8876654433
No 212
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=43.52 E-value=28 Score=24.26 Aligned_cols=19 Identities=21% Similarity=0.462 Sum_probs=15.1
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q psy8225 81 IANFFKSKGLQRGDAVALF 99 (479)
Q Consensus 81 la~~L~~~gi~~gd~V~i~ 99 (479)
+-..|+++|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4457788899999998774
No 213
>KOG0025|consensus
Probab=43.52 E-value=1e+02 Score=28.56 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=50.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee-ecCCcchHHHHHHHHhccceEEEeChhhHH
Q psy8225 89 GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF-INTNQRQHILIHSIKVAECKAIIYGAELSE 152 (479)
Q Consensus 89 gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 152 (479)
.+++||.|.=-..|+.---+++-=|-..|.-.+. +..+-..+++...|+..+++.||++.++..
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 5788999998898987766666666777775444 456677899999999999999999887653
No 214
>PLN03102 acyl-activating enzyme; Provisional
Probab=43.47 E-value=1.4e+02 Score=30.83 Aligned_cols=80 Identities=10% Similarity=-0.090 Sum_probs=60.1
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..++.++|++...+|-.- .+...+++++..|+.++... ...++++...++..++..++
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii 116 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILF 116 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEE
Confidence 4788887766655544 457899999988888544 33456778888898888665 56888999999999999988
Q ss_pred EehHHH
Q psy8225 303 YIGEMC 308 (479)
Q Consensus 303 ~~p~~l 308 (479)
..+...
T Consensus 117 ~~~~~~ 122 (579)
T PLN03102 117 VDRSFE 122 (579)
T ss_pred EChhhH
Confidence 766443
No 215
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=43.43 E-value=2.4e+02 Score=25.19 Aligned_cols=68 Identities=4% Similarity=0.118 Sum_probs=48.2
Q ss_pred HHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 82 ANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 82 a~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
...+.+.|..+++.|... ..+-.-..+.++|...|..++.+-|...+..-...++..+++++.++...
T Consensus 39 l~~a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~ 106 (244)
T cd00640 39 ILLAEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDF 106 (244)
T ss_pred HHHHHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 334444443345555444 33555667777888899999888888778888889999999999998653
No 216
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=43.29 E-value=1.8e+02 Score=33.06 Aligned_cols=94 Identities=6% Similarity=-0.043 Sum_probs=68.0
Q ss_pred cCCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhcCceeeee
Q psy8225 59 EVPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQ--PEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 59 ~~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~v~l 123 (479)
..++.+|++.. +|+ .+...+..... ..++.++|++...+|-. ..+....++.+..|+.++..
T Consensus 779 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~ 855 (1146)
T PRK08633 779 FKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYH 855 (1146)
T ss_pred CCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEe
Confidence 45677877775 788 87766655443 33678899887776643 23334467778888888776
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHHH
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEALT 155 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 155 (479)
......+.+.+.+++.++.++.........+.
T Consensus 856 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 887 (1146)
T PRK08633 856 PDPTDALGIAKLVAKHRATILLGTPTFLRLYL 887 (1146)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEecHHHHHHHH
Confidence 66678889999999999999999887665543
No 217
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=43.17 E-value=23 Score=24.71 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=12.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEE
Q psy8225 78 SNRIANFFKSKGLQRGDAVAL 98 (479)
Q Consensus 78 ~~~la~~L~~~gi~~gd~V~i 98 (479)
..-+-..|+++|+++||.|-|
T Consensus 42 ~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 42 KMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HTTHHHHHHTTT--TT-EEEE
T ss_pred HCCHHHHHHHcCCCCCCEEEE
Confidence 334455788889999999876
No 218
>PLN00011 cysteine synthase
Probab=42.89 E-value=2.1e+02 Score=27.16 Aligned_cols=65 Identities=6% Similarity=-0.050 Sum_probs=49.0
Q ss_pred HHHHcC-CCCC-CEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 84 FFKSKG-LQRG-DAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 84 ~L~~~g-i~~g-d~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
...+.| +.+| +.|. ....+-.-..+.++|..+|..+..+-|...++.....++..++++++++..
T Consensus 58 ~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 58 DAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 334444 6777 5554 355566667777888889999888888777788889999999999999753
No 219
>PRK08162 acyl-CoA synthetase; Validated
Probab=42.27 E-value=1.5e+02 Score=30.36 Aligned_cols=81 Identities=12% Similarity=-0.011 Sum_probs=61.5
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..++..++++...+|-... ++..+++++..|+..+... .....++...+++.+++.++
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~ 120 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA--MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLI 120 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH--HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEE
Confidence 5888888776665554 3478899999888887654 3566778888898877655 56788899999999999988
Q ss_pred EehHHHH
Q psy8225 303 YIGEMCR 309 (479)
Q Consensus 303 ~~p~~l~ 309 (479)
..+....
T Consensus 121 ~~~~~~~ 127 (545)
T PRK08162 121 VDTEFAE 127 (545)
T ss_pred Eccchhh
Confidence 8765544
No 220
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=42.06 E-value=2e+02 Score=29.13 Aligned_cols=81 Identities=7% Similarity=-0.124 Sum_probs=60.2
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..++.+++++....+-+..+ ...+++++..|+.++... ...++.+...+++.++..++
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 114 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF--IFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLV 114 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEE
Confidence 4677777665555443 45788999998888766543 456678888898888665 56888899999999999998
Q ss_pred EehHHHH
Q psy8225 303 YIGEMCR 309 (479)
Q Consensus 303 ~~p~~l~ 309 (479)
..+....
T Consensus 115 ~~~~~~~ 121 (517)
T PRK08008 115 TSAQFYP 121 (517)
T ss_pred EecchhH
Confidence 8776543
No 221
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=41.99 E-value=2.4e+02 Score=29.52 Aligned_cols=95 Identities=13% Similarity=0.056 Sum_probs=65.5
Q ss_pred CCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-
Q psy8225 206 KPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR- 281 (479)
Q Consensus 206 ~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~- 281 (479)
.++.++++ +.+..+|. .-.+|...+...+..+.. ..+++++|++...+|..-.. +..+++++..|+..+..
T Consensus 66 ~p~~~A~~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALI-AVSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeC
Confidence 34555554 43322222 245788888766554443 45789999999998875543 45677888889887765
Q ss_pred CCCChhHHHHHHHHhcccEEEEeh
Q psy8225 282 SKFSASNFWKDCIKYNCTVAQYIG 305 (479)
Q Consensus 282 ~~~~~~~~~~~i~~~~~t~~~~~p 305 (479)
+.+....+...+++.++.+++...
T Consensus 141 ~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 141 GGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcc
Confidence 467888899999999999888754
No 222
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=41.86 E-value=1.6e+02 Score=30.29 Aligned_cols=80 Identities=18% Similarity=0.072 Sum_probs=59.4
Q ss_pred EeehHHHHHHhhhhhh----hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 227 VMTHVRAMFMAISGRY----QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
.+|...+...+..+.. ..++++++++...+|-... +...+++++..|+..+..+ .+...++...+++.+++.+
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~v 127 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVL 127 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEE
Confidence 4788877766555543 3578899999888876543 3466778888999888654 5678888899999999998
Q ss_pred EEehHHH
Q psy8225 302 QYIGEMC 308 (479)
Q Consensus 302 ~~~p~~l 308 (479)
.......
T Consensus 128 i~~~~~~ 134 (560)
T PRK08751 128 VVIDNFG 134 (560)
T ss_pred EEcchhH
Confidence 8765544
No 223
>PRK06381 threonine synthase; Validated
Probab=41.86 E-value=1.2e+02 Score=28.51 Aligned_cols=63 Identities=6% Similarity=-0.050 Sum_probs=47.0
Q ss_pred HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 84 FFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 84 ~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
.+++.|. +.|. ....+-.-..+.++|...|..+..+-|...+......++..++++++++.+.
T Consensus 57 ~a~~~g~---~~lv-~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 57 RAMRLGY---SGIT-VGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKY 119 (319)
T ss_pred HHHHcCC---CEEE-EeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCH
Confidence 3445553 3443 3456666777788889999988888777777777789999999999998653
No 224
>PRK07476 eutB threonine dehydratase; Provisional
Probab=41.57 E-value=2e+02 Score=27.26 Aligned_cols=63 Identities=13% Similarity=0.125 Sum_probs=45.8
Q ss_pred HHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 85 FKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 85 L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
+.+.|.++| |. ....+-.-..+.++|.+.|..++.+-|...++.....++..++++++++...
T Consensus 61 a~~~~~~~g--vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (322)
T PRK07476 61 LSAQERARG--VV-TASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQ 123 (322)
T ss_pred hhhhhhCCe--EE-EECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 344454433 33 3344555667778888999998888888887888889999999999998643
No 225
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=41.01 E-value=2.5e+02 Score=26.07 Aligned_cols=61 Identities=8% Similarity=0.116 Sum_probs=46.9
Q ss_pred HcC-CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 87 SKG-LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 87 ~~g-i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+.| +.+|+.|.- ...+-.-....++|.+.|..+..+-|...+++....++..++++++++.
T Consensus 52 ~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 52 KRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 345 467776654 4555556667778888999998888887777888899999999999875
No 226
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=40.59 E-value=1.4e+02 Score=27.67 Aligned_cols=97 Identities=10% Similarity=0.068 Sum_probs=52.1
Q ss_pred hhcCCCccccEEEEeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHH---H
Q psy8225 57 IREVPMTGAYKYTVTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHI---L 132 (479)
Q Consensus 57 ~~~~p~~~a~~~~~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~---l 132 (479)
.+..|+.-.... -.+ ++.++.+.+-..+++.--...++..+...+...++.-.+++-..+..-.--....++++ +
T Consensus 142 ~~~dP~~~~~y~-~N~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l 220 (286)
T cd01019 142 SALDPDNAATYA-ANLEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKI 220 (286)
T ss_pred HHHCchhHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHH
Confidence 334555533222 234 44444444444444431112346677788888888877776544422111122334554 5
Q ss_pred HHHHHhccceEEEeChhhHHHH
Q psy8225 133 IHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 133 ~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
...++..+.++||++.......
T Consensus 221 ~~~ik~~~v~~If~e~~~~~~~ 242 (286)
T cd01019 221 RKEIKEKGATCVFAEPQFHPKI 242 (286)
T ss_pred HHHHHHcCCcEEEecCCCChHH
Confidence 5566788999999987654433
No 227
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=40.34 E-value=3.6e+02 Score=26.29 Aligned_cols=104 Identities=12% Similarity=0.106 Sum_probs=63.2
Q ss_pred chhHHHHHHHhhcCCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCC--CCEEEEEcCCchH--HHHH
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQR--GDAVALFMEGQPE--YVCM 109 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~--gd~V~i~~~n~~e--~~~~ 109 (479)
.++.++++=..+.+-+..+++.. +|+ ++...+..++..+ ++.. .|++..++|-..- +...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~ 156 (386)
T TIGR02372 80 RRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFS 156 (386)
T ss_pred ccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHH
Confidence 34556666555555455666664 899 9988887777665 4433 4567777775432 3344
Q ss_pred HHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHHH
Q psy8225 110 WLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALTE 156 (479)
Q Consensus 110 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 156 (479)
.+..+..|+.++... ..++..+...++.. .+++..+.....+.+
T Consensus 157 ~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~ 200 (386)
T TIGR02372 157 CLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQLAD 200 (386)
T ss_pred HHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHHHh
Confidence 566667888777654 45555555554432 566666666655544
No 228
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=40.29 E-value=4e+02 Score=30.37 Aligned_cols=94 Identities=10% Similarity=-0.035 Sum_probs=65.8
Q ss_pred cCCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeee
Q psy8225 59 EVPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 59 ~~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l 123 (479)
..++.+|++.. +|+ ++...+...... .+++++|++...+|-... +....+..+..|...+..
T Consensus 790 ~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~ 866 (1140)
T PRK06814 790 RDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR---IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLY 866 (1140)
T ss_pred CCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh---hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEe
Confidence 35677777775 788 887666655543 378899999888775332 334566677788887766
Q ss_pred cCCcchHHHHHHHHhccceEEEeChhhHHHHH
Q psy8225 124 NTNQRQHILIHSIKVAECKAIIYGAELSEALT 155 (479)
Q Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 155 (479)
+.....+.+.+.+++.++.++.........+.
T Consensus 867 ~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 898 (1140)
T PRK06814 867 PSPLHYRIIPELIYDTNATILFGTDTFLNGYA 898 (1140)
T ss_pred cCcccHHHHHHHHHhcCCEEEEecHHHHHHHH
Confidence 55455667788899999999998876655443
No 229
>KOG1250|consensus
Probab=40.21 E-value=1.4e+02 Score=28.99 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=44.7
Q ss_pred EEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 95 AVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 95 ~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
.|+-...| ....+.|++.++|..+..+-|...+....+.++..++.+++....
T Consensus 117 ViasSaGN--ha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~ 169 (457)
T KOG1250|consen 117 VIASSAGN--HAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGED 169 (457)
T ss_pred eEEecCcc--HHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEeccc
Confidence 44444444 466788999999999999999999999999999999999998764
No 230
>PRK13383 acyl-CoA synthetase; Provisional
Probab=40.19 E-value=2e+02 Score=29.19 Aligned_cols=83 Identities=13% Similarity=-0.006 Sum_probs=59.7
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..++.+++++...++-.- .++..+++++..|+..+..+ .+..+++...+++.++..+.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~--~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 137 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR--GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVV 137 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEE
Confidence 4677777665555444 346888999888776443 33456778888899988765 56788888999999999998
Q ss_pred EehHHHHHH
Q psy8225 303 YIGEMCRYL 311 (479)
Q Consensus 303 ~~p~~l~~l 311 (479)
..+.....+
T Consensus 138 ~~~~~~~~~ 146 (516)
T PRK13383 138 ADNEFAERI 146 (516)
T ss_pred EchhHHHHH
Confidence 877665543
No 231
>PRK10717 cysteine synthase A; Provisional
Probab=40.04 E-value=2.4e+02 Score=26.76 Aligned_cols=61 Identities=10% Similarity=0.123 Sum_probs=46.7
Q ss_pred HcC-CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 87 SKG-LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 87 ~~g-i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+.| +++|+.|.- ...+-.-..+.++|.+.|..+..+-|...++.....++..++++++++.
T Consensus 57 ~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~ 118 (330)
T PRK10717 57 KRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPA 118 (330)
T ss_pred HcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 345 466766544 4455556667778888999888888887778888999999999999975
No 232
>KOG0025|consensus
Probab=39.93 E-value=2.8e+02 Score=25.77 Aligned_cols=103 Identities=10% Similarity=0.027 Sum_probs=65.0
Q ss_pred hhhhhhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCCCChhHHHHHHHHhcccEEEEehHHHHHHhcCCCC
Q psy8225 238 ISGRYQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSKFSASNFWKDCIKYNCTVAQYIGEMCRYLLAVPEK 317 (479)
Q Consensus 238 ~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~ 317 (479)
+.+.+..++.++|.+.....-+.+.-....+..++-.-.--++.++.+.+++.+.++.++++.+++-..+...=...
T Consensus 150 rmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k--- 226 (354)
T KOG0025|consen 150 RMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKK--- 226 (354)
T ss_pred HHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhh---
Confidence 34445667889998888776666544344444444444444566788999999999999999987655433221111
Q ss_pred CCCCCCceeEEE---ecCCChhhHHHHHH
Q psy8225 318 PEDTQHSVKMMI---GNGLRPQVWEPFQK 343 (479)
Q Consensus 318 ~~~~l~~lr~~~---G~~l~~~~~~~~~~ 343 (479)
....++..|+.+ |+....++.+.+.+
T Consensus 227 ~~~~~~~prLalNcVGGksa~~iar~L~~ 255 (354)
T KOG0025|consen 227 FKGDNPRPRLALNCVGGKSATEIARYLER 255 (354)
T ss_pred hhccCCCceEEEeccCchhHHHHHHHHhc
Confidence 111345555544 78777777777764
No 233
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=39.54 E-value=4.3e+02 Score=26.90 Aligned_cols=91 Identities=10% Similarity=-0.001 Sum_probs=63.1
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE--YVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.+|++.. +|+ .+...+..... ..+++.+|++...+|-... ++...+..+..|...+ +.
T Consensus 193 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~-~~ 268 (538)
T TIGR03208 193 SPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE---RLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAV-LQ 268 (538)
T ss_pred CCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh---hcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEE-ec
Confidence 4567777665 677 76655444433 3367889988888875532 3455667777787665 44
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
+.+.++.+...+++.++.++.........+
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 567888999999999999998876655443
No 234
>PRK07787 acyl-CoA synthetase; Validated
Probab=39.25 E-value=2.6e+02 Score=27.89 Aligned_cols=91 Identities=10% Similarity=-0.012 Sum_probs=63.9
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chHHHHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEG--QPEYVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~v~l~ 124 (479)
.++.+|++.. +|+ .+...+..++.. .++.++|++...+|- ..-++..+++.+..|+.++...
T Consensus 126 ~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 126 DPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 4566776665 788 887766555543 367888887766653 2334566788899999887654
Q ss_pred CCcchHHHHHHHHhccceEEEeChhhHHHHH
Q psy8225 125 TNQRQHILIHSIKVAECKAIIYGAELSEALT 155 (479)
Q Consensus 125 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 155 (479)
...++.+...++ .++..+.........+.
T Consensus 203 -~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 203 -RPTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred -CCCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 467888889999 89998888776554443
No 235
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.23 E-value=1.8e+02 Score=29.99 Aligned_cols=79 Identities=14% Similarity=0.063 Sum_probs=59.4
Q ss_pred EeehHHHHHHhhhhhhh----cCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 227 VMTHVRAMFMAISGRYQ----TGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~~----~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
.+|...+...+..+... .++.++|++...+|-...+ ...+++++..|+..+... .+..+++...+++.++..+
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~--~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY--PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 57888887776665543 3688999998888865543 466778889999888665 5677888889999898888
Q ss_pred EEehHH
Q psy8225 302 QYIGEM 307 (479)
Q Consensus 302 ~~~p~~ 307 (479)
+.....
T Consensus 127 i~~~~~ 132 (562)
T PRK05677 127 VCLANM 132 (562)
T ss_pred EEecch
Confidence 765543
No 236
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=39.08 E-value=27 Score=23.24 Aligned_cols=19 Identities=21% Similarity=0.312 Sum_probs=13.7
Q ss_pred cCCeeEEecCCcEEEecCC
Q psy8225 457 TGDILIKDKFQYFYFKDRT 475 (479)
Q Consensus 457 TGD~g~~d~dG~l~~~GR~ 475 (479)
-|.+.|.|+||.+.|.|+.
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 4567888888888888864
No 237
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=38.51 E-value=78 Score=24.39 Aligned_cols=41 Identities=15% Similarity=0.315 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce
Q psy8225 79 NRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 79 ~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 119 (479)
..+...+.+.|+.+++.|.+++.++.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45566677788888999999998887777777777788863
No 238
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=38.34 E-value=1.1e+02 Score=29.57 Aligned_cols=83 Identities=14% Similarity=0.150 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC-----cchHHHHHHHHhccceEEEeCh-
Q psy8225 75 EDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN-----QRQHILIHSIKVAECKAIIYGA- 148 (479)
Q Consensus 75 ~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~~- 148 (479)
.+-+..+--.|+.+++++||-|.+ .+.-|+.+.=++...|+.+|.++-+ .+++.+...+... .|+|+.-+
T Consensus 56 ~sgT~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl 131 (374)
T COG0399 56 SSGTAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHL 131 (374)
T ss_pred cChHHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehh
Confidence 356777777888889999995543 3567899999999999999998543 5677887777764 67777532
Q ss_pred ----hhHHHHHHhhccC
Q psy8225 149 ----ELSEALTEVKDSI 161 (479)
Q Consensus 149 ----~~~~~~~~~~~~~ 161 (479)
...+.+.++.+..
T Consensus 132 ~G~~~dm~~i~~la~~~ 148 (374)
T COG0399 132 AGQPCDMDAIMALAKRH 148 (374)
T ss_pred ccCCCCHHHHHHHHHHc
Confidence 2345555555443
No 239
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.06 E-value=2e+02 Score=29.55 Aligned_cols=82 Identities=16% Similarity=0.073 Sum_probs=61.2
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..... ..+++.+|++...+|-... ++..+++++..|+..+... .+....+...+.+.++..++
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 134 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAI 134 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEE
Confidence 4788887766555443 4578899999888876554 3466778888899888654 57888999999999999988
Q ss_pred EehHHHHH
Q psy8225 303 YIGEMCRY 310 (479)
Q Consensus 303 ~~p~~l~~ 310 (479)
.....+..
T Consensus 135 ~~~~~~~~ 142 (573)
T PRK05605 135 VWDKVAPT 142 (573)
T ss_pred echhhHHH
Confidence 87665443
No 240
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=38.04 E-value=2.6e+02 Score=29.57 Aligned_cols=84 Identities=13% Similarity=-0.036 Sum_probs=62.4
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..++.++|++...++-..- ++...++++..|+..+... ....+++...+++.++.++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v 153 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIA 153 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEE
Confidence 35788888776665544 4578999999888886543 3466778888999887654 5678888899999999998
Q ss_pred EEehHHHHHH
Q psy8225 302 QYIGEMCRYL 311 (479)
Q Consensus 302 ~~~p~~l~~l 311 (479)
+.....+..+
T Consensus 154 ~~~~~~~~~~ 163 (660)
T PLN02861 154 FVQESKISSI 163 (660)
T ss_pred EECHHHHHHH
Confidence 8876655444
No 241
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=37.99 E-value=2.8e+02 Score=26.58 Aligned_cols=92 Identities=11% Similarity=0.205 Sum_probs=63.2
Q ss_pred CCCccccEEE---E--ehhhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHH
Q psy8225 60 VPMTGAYKYT---V--TFQVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIH 134 (479)
Q Consensus 60 ~p~~~a~~~~---~--Ty~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 134 (479)
...++.+... . +|.+.-.-+++.+ |...+-++.-.|+-...|.-+- ..|||.++|...+.+-|..++..-..
T Consensus 38 ~g~~v~lK~E~lQ~~gSFK~RGA~n~i~~-Ls~e~~~~~gViaaSaGNHaQG--vA~aa~~lGi~a~IvMP~~tp~~Kv~ 114 (347)
T COG1171 38 LGAEIYLKRENLQPVGSFKIRGAYNKLSS-LSEEEERAAGVIAASAGNHAQG--VAYAAKRLGIKATIVMPETTPKIKVD 114 (347)
T ss_pred hCceEEEeeccCcccccchhhhHHHHHHh-cChhhhhcCceEEecCCcHHHH--HHHHHHHhCCCEEEEecCCCcHHHHH
Confidence 4455555555 2 3355555555555 4422212222666666676554 56999999999999999999999999
Q ss_pred HHHhccceEEEeChhhHHHH
Q psy8225 135 SIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 135 ~l~~~~~~~vi~~~~~~~~~ 154 (479)
-.+..++++++++..+.+..
T Consensus 115 a~r~~GaeVil~g~~~dda~ 134 (347)
T COG1171 115 ATRGYGAEVILHGDNFDDAY 134 (347)
T ss_pred HHHhcCCEEEEECCCHHHHH
Confidence 99999999999987665443
No 242
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=37.81 E-value=2.2e+02 Score=30.34 Aligned_cols=86 Identities=12% Similarity=0.040 Sum_probs=63.8
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-CCCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-SKFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..+++++|++...++-..- ++...++++..|+..+.. +.+.++++...++..++.++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 34788777766655544 5578999998888775543 345677888889888854 46788899999999999999
Q ss_pred EEehHHHHHHhc
Q psy8225 302 QYIGEMCRYLLA 313 (479)
Q Consensus 302 ~~~p~~l~~l~~ 313 (479)
+.....+..+..
T Consensus 183 i~~~~~~~~l~~ 194 (696)
T PLN02387 183 ICDSKQLKKLID 194 (696)
T ss_pred EECHHHHHHHHH
Confidence 988776665543
No 243
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=37.81 E-value=2.9e+02 Score=27.22 Aligned_cols=54 Identities=17% Similarity=0.124 Sum_probs=40.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHhhhcCceeeee--cCCcchHHHHHHHHhccceEEE
Q psy8225 92 RGDAVALFMEGQPEYVCMWLGLSKIGVVAAFI--NTNQRQHILIHSIKVAECKAII 145 (479)
Q Consensus 92 ~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~vi 145 (479)
+|-+|+.+++=.++..+.+..+..+|+-+... ||..+.+++...|...+..++-
T Consensus 31 ~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a 86 (406)
T TIGR00936 31 KGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFA 86 (406)
T ss_pred CCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEE
Confidence 47788888888888888888888888876655 6766777777777777777554
No 244
>PRK07798 acyl-CoA synthetase; Validated
Probab=37.50 E-value=4e+02 Score=26.85 Aligned_cols=82 Identities=11% Similarity=-0.078 Sum_probs=58.1
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
-.+|...+...+..+.. ..++.+++++...++-.. .++..+++++..|+..+..+ ......+...+++.++..+
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 104 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI--EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVAL 104 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEE
Confidence 35788777666555443 456888998888776543 33566778888999888665 4577788888888888888
Q ss_pred EEehHHHH
Q psy8225 302 QYIGEMCR 309 (479)
Q Consensus 302 ~~~p~~l~ 309 (479)
+.......
T Consensus 105 ~~~~~~~~ 112 (533)
T PRK07798 105 VYEREFAP 112 (533)
T ss_pred EEchhhHH
Confidence 77665433
No 245
>PRK07514 malonyl-CoA synthase; Validated
Probab=37.20 E-value=2.4e+02 Score=28.27 Aligned_cols=82 Identities=9% Similarity=-0.132 Sum_probs=60.0
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..++.+++++...++-.. .+...+++++..|+..+..+ .....++...+++.++..+
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 35787777665554443 457889999988887653 34566778888898888665 5677888889999999998
Q ss_pred EEehHHHH
Q psy8225 302 QYIGEMCR 309 (479)
Q Consensus 302 ~~~p~~l~ 309 (479)
...+....
T Consensus 105 i~~~~~~~ 112 (504)
T PRK07514 105 VCDPANFA 112 (504)
T ss_pred EEccchhH
Confidence 87765543
No 246
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=36.88 E-value=1.8e+02 Score=28.23 Aligned_cols=66 Identities=18% Similarity=0.116 Sum_probs=43.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecC-----CcchHHHHHHHHh---ccceEEEe
Q psy8225 78 SNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINT-----NQRQHILIHSIKV---AECKAIIY 146 (479)
Q Consensus 78 ~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vi~ 146 (479)
...+...+...++++||.|.+-.+. +....-++...|+.++.++. ....+++...++. -+.++|+.
T Consensus 54 t~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 54 TSALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 3445555556678999997777654 34445667788987777654 2456777777763 35667764
No 247
>PLN02614 long-chain acyl-CoA synthetase
Probab=36.81 E-value=2.5e+02 Score=29.82 Aligned_cols=83 Identities=10% Similarity=-0.075 Sum_probs=62.0
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..+++++|++...++-+.- ++...++++..|+..+... .+.++++...+++.++.+++
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPE--WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 4688877766655443 4578999999888886654 3566778888999888654 56888899999999999998
Q ss_pred EehHHHHHH
Q psy8225 303 YIGEMCRYL 311 (479)
Q Consensus 303 ~~p~~l~~l 311 (479)
.....+..+
T Consensus 157 ~~~~~~~~~ 165 (666)
T PLN02614 157 VEEKKISEL 165 (666)
T ss_pred ECHHHHHHH
Confidence 876655444
No 248
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=36.62 E-value=2.5e+02 Score=27.98 Aligned_cols=61 Identities=10% Similarity=0.068 Sum_probs=47.3
Q ss_pred HcCC-CCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 87 SKGL-QRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 87 ~~gi-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
+.|. .+|+.|.-. ..+-.-..+.++|.+.|..+..+-|...+++-...++..++++++++.
T Consensus 55 ~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 55 ASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred HcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 4454 677665444 555666777788899999998888877777888899999999999864
No 249
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=36.43 E-value=2.9e+02 Score=28.22 Aligned_cols=92 Identities=7% Similarity=-0.079 Sum_probs=64.3
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHhhhcCceeeeecC
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEY-VCMWLGLSKIGVVAAFINT 125 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~v~l~~ 125 (479)
.++.+|++.. +|+ .+...+... ....++++++++...+|-...+ +..+++.+..|+.++...
T Consensus 178 ~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~- 253 (542)
T PRK06155 178 QPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNS---AEDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEP- 253 (542)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHH---HHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeC-
Confidence 4566777664 678 776554333 3334788999998888754332 334578888898877654
Q ss_pred CcchHHHHHHHHhccceEEEeChhhHHHHH
Q psy8225 126 NQRQHILIHSIKVAECKAIIYGAELSEALT 155 (479)
Q Consensus 126 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 155 (479)
..+++.+...+++.++..+.........+.
T Consensus 254 ~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~ 283 (542)
T PRK06155 254 RFSASGFWPAVRRHGATVTYLLGAMVSILL 283 (542)
T ss_pred CCCHHHHHHHHHHhCCcEEEchHHHHHHHH
Confidence 567889999999999999988776555443
No 250
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=36.41 E-value=3.5e+02 Score=25.02 Aligned_cols=65 Identities=8% Similarity=0.044 Sum_probs=48.5
Q ss_pred HHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 85 FKSKGL-QRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 85 L~~~gi-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
+.+.|. ++|+.|.. ...+-.-..+.++|.+.|..++.+-|..........++..++++++++...
T Consensus 44 a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 44 AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 344453 35565544 556666677778888999998888887777778889999999999997653
No 251
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=36.26 E-value=1.8e+02 Score=27.26 Aligned_cols=92 Identities=17% Similarity=0.104 Sum_probs=70.2
Q ss_pred chhHHHHHHHhhcCCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcC-CchHHHHHHHH
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFME-GQPEYVCMWLG 112 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~-n~~e~~~~~lA 112 (479)
+|+..++++..+..+.++.-+.. +.- |+-.....++++|+.. ++...-|.+++. ...|.+-+.|-
T Consensus 140 TTlAamId~iN~~~~~HIlTIEDPIE~vh~skkslI~QREvG~dT~sF~~aLraA-LReDPDVIlvGEmRD~ETi~~ALt 218 (353)
T COG2805 140 TTLAAMIDYINKHKAKHILTIEDPIEYVHESKKSLINQREVGRDTLSFANALRAA-LREDPDVILVGEMRDLETIRLALT 218 (353)
T ss_pred HHHHHHHHHHhccCCcceEEecCchHhhhcchHhhhhHHHhcccHHHHHHHHHHH-hhcCCCEEEEeccccHHHHHHHHH
Confidence 77899999999998888776665 566 8888899999999986 555545666666 56788877777
Q ss_pred hhhcCc-eeeeecCCcchHHHHHHHHhc
Q psy8225 113 LSKIGV-VAAFINTNQRQHILIHSIKVA 139 (479)
Q Consensus 113 ~~~~G~-~~v~l~~~~~~~~l~~~l~~~ 139 (479)
+...|- +...++.+...+.+.+++...
T Consensus 219 AAETGHLV~~TLHT~sA~~ti~RiidvF 246 (353)
T COG2805 219 AAETGHLVFGTLHTNSAAKTIDRIIDVF 246 (353)
T ss_pred HHhcCCEEEEecccccHHHHHHHHHHhC
Confidence 777775 666677777777777776643
No 252
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=36.21 E-value=1.5e+02 Score=28.70 Aligned_cols=64 Identities=17% Similarity=0.210 Sum_probs=41.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC-----cchHHHHHHHHhccceEEE
Q psy8225 78 SNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN-----QRQHILIHSIKVAECKAII 145 (479)
Q Consensus 78 ~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi 145 (479)
...+...|...++++||.|.+-.+. |.....++...|+.++.++.. ...+++...+.. +.++|+
T Consensus 58 t~al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 58 TAGMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3444456666678999988765543 444455667789988877542 356777776643 566776
No 253
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=35.14 E-value=1.9e+02 Score=29.52 Aligned_cols=82 Identities=12% Similarity=-0.061 Sum_probs=59.2
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..++.+++++...++-...+ ...+++++..|+..+... .....++...+++.++..+
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~ 131 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY--GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLI 131 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEE
Confidence 35788888776665544 44688899998887766543 455678888999887654 4567788888999898888
Q ss_pred EEehHHHH
Q psy8225 302 QYIGEMCR 309 (479)
Q Consensus 302 ~~~p~~l~ 309 (479)
...+....
T Consensus 132 i~~~~~~~ 139 (546)
T PLN02330 132 VTNDTNYG 139 (546)
T ss_pred EEccchhh
Confidence 77654443
No 254
>PLN02356 phosphateglycerate kinase
Probab=34.80 E-value=3e+02 Score=27.26 Aligned_cols=63 Identities=6% Similarity=-0.088 Sum_probs=47.1
Q ss_pred HHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 84 FFKSKGL-QRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 84 ~L~~~gi-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
.+.+.|. +++..|. ....+-.-+...++|...|..++.+-|...+.+-...++..++++++++
T Consensus 94 ~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 94 EALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred HHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 3444444 4666554 3344444777888899999999888888888888899999999999984
No 255
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=34.73 E-value=3.4e+02 Score=27.17 Aligned_cols=92 Identities=8% Similarity=0.013 Sum_probs=63.4
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhcCceeeeecC
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE-YVCMWLGLSKIGVVAAFINT 125 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~v~l~~ 125 (479)
.++.++++.. +|+ .+...+..+.. ..++..++++....|-... .+...++++..|+..+...+
T Consensus 139 ~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 215 (502)
T TIGR01734 139 KGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDK 215 (502)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCH
Confidence 3455666655 788 77655544333 3477888888777665433 24557788999999887765
Q ss_pred C--cchHHHHHHHHhccceEEEeChhhHHHH
Q psy8225 126 N--QRQHILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 126 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
. .....+.+.++..++..+.........+
T Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~ 246 (502)
T TIGR01734 216 DITNNFKLLFEELPKTGLNVWVSTPSFVDMC 246 (502)
T ss_pred HHhcCHHHHHHHHHHcCCeEEEEChhHHHHH
Confidence 4 3567788889999999988887665443
No 256
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.58 E-value=3e+02 Score=27.69 Aligned_cols=82 Identities=13% Similarity=-0.087 Sum_probs=58.5
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..... ..+++.++++....+-+... +..+++++..|+..+..+ .+....+...+++.++..++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii 88 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEF--FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLI 88 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEE
Confidence 4677677655554443 45688999998888766543 455778888999888665 46777888888888998888
Q ss_pred EehHHHHH
Q psy8225 303 YIGEMCRY 310 (479)
Q Consensus 303 ~~p~~l~~ 310 (479)
..+.....
T Consensus 89 ~~~~~~~~ 96 (502)
T PRK08276 89 VSAALADT 96 (502)
T ss_pred EccchhhH
Confidence 77655443
No 257
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=34.22 E-value=2.8e+02 Score=32.42 Aligned_cols=98 Identities=13% Similarity=-0.030 Sum_probs=65.2
Q ss_pred CCCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec
Q psy8225 205 NKPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR 281 (479)
Q Consensus 205 ~~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 281 (479)
..++.++++...+...+......+|...+...+..+.. ..+.++++++...++-+..+ +..+++++..|+..+..
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~--i~~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL--VVAVMGVLKAGATFSVI 325 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH--HHHHHHHHhhCcEEecc
Confidence 35566666543221101112346888888776666554 34788999998888866543 56778899999988876
Q ss_pred C-CCChhHHHHHHHHhcccEEEEe
Q psy8225 282 S-KFSASNFWKDCIKYNCTVAQYI 304 (479)
Q Consensus 282 ~-~~~~~~~~~~i~~~~~t~~~~~ 304 (479)
+ ...+.++...++..++..+...
T Consensus 326 dp~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 326 DPAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCCCcHHHHHHHHHhcCCCEEEEe
Confidence 5 4566777788888888877654
No 258
>PRK06382 threonine dehydratase; Provisional
Probab=34.21 E-value=2.9e+02 Score=27.14 Aligned_cols=51 Identities=10% Similarity=0.079 Sum_probs=40.6
Q ss_pred cCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 100 MEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 100 ~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
...+-.-..+.++|...|..+..+-|...+......++..+++++++....
T Consensus 79 aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~ 129 (406)
T PRK06382 79 ASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDY 129 (406)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCH
Confidence 333445556678899999999998888877778888999999999997643
No 259
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=33.95 E-value=79 Score=29.23 Aligned_cols=42 Identities=12% Similarity=0.199 Sum_probs=36.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce
Q psy8225 78 SNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 78 ~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 119 (479)
...+...|.+.|+.+++.|.+++.++.....+++++..+|..
T Consensus 216 ~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 216 TDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred HHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 456677788889999999999999999999999999989975
No 260
>PRK13388 acyl-CoA synthetase; Provisional
Probab=33.94 E-value=2.9e+02 Score=28.19 Aligned_cols=81 Identities=15% Similarity=-0.001 Sum_probs=59.1
Q ss_pred EeehHHHHHHhhhhhh---hcCC-CCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGL-TSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~-~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
.+|...+...+..+.. ..++ .+++++...++-+.. ++..+++++..|+..+..+ .+..+++...+.+.++..+
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~--~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~ 103 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE--MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLL 103 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH--HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEE
Confidence 6788888776665554 3466 688888888875544 3456778888999888655 5677788889999999988
Q ss_pred EEehHHHH
Q psy8225 302 QYIGEMCR 309 (479)
Q Consensus 302 ~~~p~~l~ 309 (479)
+.......
T Consensus 104 i~~~~~~~ 111 (540)
T PRK13388 104 VTDAEHRP 111 (540)
T ss_pred EEChhhhH
Confidence 87665443
No 261
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=33.79 E-value=3e+02 Score=25.71 Aligned_cols=68 Identities=18% Similarity=0.139 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH----------------------------HHHHHHHhhhcCceeeeec
Q psy8225 73 QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPE----------------------------YVCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 73 ~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e----------------------------~~~~~lA~~~~G~~~v~l~ 124 (479)
++.+..+.+..++++.|+. +.|.|..-+.-. ..+..+|++..|+.++...
T Consensus 130 ~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fvN~t 207 (295)
T PF07994_consen 130 QVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFVNGT 207 (295)
T ss_dssp HHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEEE-S
T ss_pred HHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeEecc
Confidence 5556667777788887765 356665554433 3456688899999999998
Q ss_pred CCcch--HHHHHHHHhccce
Q psy8225 125 TNQRQ--HILIHSIKVAECK 142 (479)
Q Consensus 125 ~~~~~--~~l~~~l~~~~~~ 142 (479)
|.... ..+.++.++.+.-
T Consensus 208 P~~~a~~P~l~ela~~~gvp 227 (295)
T PF07994_consen 208 PSNIADDPALVELAEEKGVP 227 (295)
T ss_dssp SSTTTTSHHHHHHHHHHTEE
T ss_pred CccccCCHHHHHHHHHcCCC
Confidence 88766 7788888776644
No 262
>PF08967 DUF1884: Domain of unknown function (DUF1884); InterPro: IPR014418 This group represents an uncharacterised conserved protein.; PDB: 2PK8_A.
Probab=33.67 E-value=38 Score=24.28 Aligned_cols=68 Identities=15% Similarity=0.161 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHH
Q psy8225 73 QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSE 152 (479)
Q Consensus 73 ~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 152 (479)
++...++.-++-|+.-|+.|. |.+.+|.-.+|+..- ..-.+|.- .+.++..+.++|+.|+....
T Consensus 9 ~il~~ie~~inELk~dG~ePD--ivL~G~ef~e~~~~~-~l~~~~lk-------------vy~i~ELg~DAVvaDSk~LG 72 (85)
T PF08967_consen 9 RILELIEEKINELKEDGFEPD--IVLVGPEFYEFLSEE-VLEVSGLK-------------VYVIEELGSDAVVADSKYLG 72 (85)
T ss_dssp HHHHHHHHHHHHHHHTT------EEEE-HHHHHHHHH----EETTEE-------------EEE-GGGTTEEEEE-TTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCCC--EEEEcHHHHHHHHHH-HHHhhCce-------------EEEHHhcCCceEEEchHHhc
Confidence 456678888999999999984 889988877776540 00011111 13467789999999987665
Q ss_pred HHHH
Q psy8225 153 ALTE 156 (479)
Q Consensus 153 ~~~~ 156 (479)
.++.
T Consensus 73 ~~~~ 76 (85)
T PF08967_consen 73 QLKK 76 (85)
T ss_dssp TSTT
T ss_pred cccc
Confidence 5443
No 263
>PRK09088 acyl-CoA synthetase; Validated
Probab=33.65 E-value=4.2e+02 Score=26.42 Aligned_cols=77 Identities=10% Similarity=-0.161 Sum_probs=57.3
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..++..++++...++-...+ +..+++++..|+..+... ......+...+++.+++.+.
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii 99 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL--VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLL 99 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEE
Confidence 5788888766655443 44678899998888766543 456778888898888665 56788888999999998887
Q ss_pred Eeh
Q psy8225 303 YIG 305 (479)
Q Consensus 303 ~~p 305 (479)
...
T Consensus 100 ~~~ 102 (488)
T PRK09088 100 GDD 102 (488)
T ss_pred Ecc
Confidence 654
No 264
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=33.57 E-value=2.1e+02 Score=29.42 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=57.9
Q ss_pred EEeehHHHHHHhhhhhhh----cCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccE
Q psy8225 226 AVMTHVRAMFMAISGRYQ----TGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTV 300 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~~----~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 300 (479)
..+|...+...+..+... .+++++|++...++-... +...+++++..|+..+... .+...++...+.+.++..
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e--~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ--YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceE
Confidence 357888887666555543 368899999888776553 4566778889998888654 567788888898888888
Q ss_pred EEEehH
Q psy8225 301 AQYIGE 306 (479)
Q Consensus 301 ~~~~p~ 306 (479)
+...+.
T Consensus 126 ~i~~~~ 131 (562)
T PRK12492 126 LVYLNM 131 (562)
T ss_pred EEeccc
Confidence 876543
No 265
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=33.38 E-value=1e+02 Score=23.08 Aligned_cols=41 Identities=2% Similarity=-0.018 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce
Q psy8225 79 NRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 79 ~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 119 (479)
..+...+...++.+++.|.+++.++.....+...+...|..
T Consensus 52 ~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 52 EEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred HHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 35566666677777889999999888777777777888864
No 266
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=33.06 E-value=1.5e+02 Score=29.48 Aligned_cols=56 Identities=21% Similarity=0.326 Sum_probs=37.3
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC-----cchHHHHHHHHhccceEEEeC
Q psy8225 88 KGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN-----QRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 88 ~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 147 (479)
.++++||.|.+-.+.. .....++...|+.++.++.. ...+.+...+.. +.++|+..
T Consensus 106 ~~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 3889999987765544 45556677789988777543 356667666643 56777764
No 267
>PRK05850 acyl-CoA synthetase; Validated
Probab=33.01 E-value=5.4e+02 Score=26.47 Aligned_cols=83 Identities=11% Similarity=-0.023 Sum_probs=59.5
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC----CChhHHHHHHHHhcc
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK----FSASNFWKDCIKYNC 298 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~ 298 (479)
..+|...+...+..+.. ..+ .++|++...++-+. .++..+++++..|+..+..+. ....++...+++.++
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~ 110 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL--EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSP 110 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCC
Confidence 46788887765555443 234 57899888888654 345667888999998887753 356778889999999
Q ss_pred cEEEEehHHHHHH
Q psy8225 299 TVAQYIGEMCRYL 311 (479)
Q Consensus 299 t~~~~~p~~l~~l 311 (479)
..++..+.....+
T Consensus 111 ~~il~~~~~~~~~ 123 (578)
T PRK05850 111 SVVLTTSAVVDDV 123 (578)
T ss_pred CEEEEcHHHHHHH
Confidence 9998877665543
No 268
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=32.92 E-value=2.9e+02 Score=28.30 Aligned_cols=81 Identities=12% Similarity=0.062 Sum_probs=60.0
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..++.+++++...++-.... ...+++++..|+..+..+ ......+...+++.++..+
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~--~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~v 124 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY--PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAI 124 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEE
Confidence 46788888776665544 34788999998888765543 455678888999988665 5577888889999999988
Q ss_pred EEehHHH
Q psy8225 302 QYIGEMC 308 (479)
Q Consensus 302 ~~~p~~l 308 (479)
.....+.
T Consensus 125 i~~~~~~ 131 (557)
T PRK07059 125 VVLENFA 131 (557)
T ss_pred EEchhhH
Confidence 8766543
No 269
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=32.43 E-value=2e+02 Score=27.13 Aligned_cols=98 Identities=9% Similarity=0.155 Sum_probs=54.0
Q ss_pred HHHHHhhcCCCccccEEEEeh-hhHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC--
Q psy8225 52 LFVRTIREVPMTGAYKYTVTF-QVEDHSNRIANFFKSK--GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN-- 126 (479)
Q Consensus 52 ~l~~~~~~~p~~~a~~~~~Ty-~l~~~~~~la~~L~~~--gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~-- 126 (479)
+-+...+..|+...... -.+ ++.++.+.+-..+++. .+ + ++..+...+...++.--+++-..|.+ -+.+.
T Consensus 161 I~~~L~~~dP~~~~~y~-~N~~~~~~~L~~l~~~~~~~l~~~-~-~~~~i~~H~af~Yf~~~ygl~~~~~~--~~~~~~e 235 (311)
T PRK09545 161 IHDKLVELMPQSKAKLD-ANLKDFEAQLAQTDKQIGNQLAPV-K-GKGYFVFHDAYGYFEKHYGLTPLGHF--TVNPEIQ 235 (311)
T ss_pred HHHHHHHhChhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcc-C-CCcEEEECchHHHHHHhCCCceeeee--ccCCCCC
Confidence 33334445565543322 223 3333444444444433 12 2 35566788888888888877766632 23332
Q ss_pred cchHH---HHHHHHhccceEEEeChhhHHHH
Q psy8225 127 QRQHI---LIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 127 ~~~~~---l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
-++++ +...++..++++||++....+..
T Consensus 236 ps~~~l~~l~~~ik~~~v~~If~e~~~~~~~ 266 (311)
T PRK09545 236 PGAQRLHEIRTQLVEQKATCVFAEPQFRPAV 266 (311)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCChHH
Confidence 24455 55566778899999987765543
No 270
>PRK13391 acyl-CoA synthetase; Provisional
Probab=32.42 E-value=4.5e+02 Score=26.48 Aligned_cols=94 Identities=11% Similarity=-0.089 Sum_probs=64.4
Q ss_pred CCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC
Q psy8225 206 KPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS 282 (479)
Q Consensus 206 ~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 282 (479)
.++.++.+...++ -.+|...+...+..+.. ..++.+++++....+-...+ +..+++++..|+..+...
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY--LEVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhccEEeccc
Confidence 3455555544332 24788777766555443 34688899998887765543 455778888899888665
Q ss_pred -CCChhHHHHHHHHhcccEEEEehHHH
Q psy8225 283 -KFSASNFWKDCIKYNCTVAQYIGEMC 308 (479)
Q Consensus 283 -~~~~~~~~~~i~~~~~t~~~~~p~~l 308 (479)
......+...+++.++..+...+...
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~ 107 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKL 107 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhH
Confidence 56778888888888888887766544
No 271
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=32.39 E-value=2.5e+02 Score=22.02 Aligned_cols=86 Identities=12% Similarity=0.137 Sum_probs=51.7
Q ss_pred hhhhhhHHHHHHHHhcCceEEecCC-CChhHHHHHHHHhcccEEEEehH------HHHHHhcCCCCCCCCCCceeEEEec
Q psy8225 259 YHTAGGLLGIGQCLLGGSTVVIRSK-FSASNFWKDCIKYNCTVAQYIGE------MCRYLLAVPEKPEDTQHSVKMMIGN 331 (479)
Q Consensus 259 ~h~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~p~------~l~~l~~~~~~~~~~l~~lr~~~G~ 331 (479)
.|..|..+.....-..|-.++.... ..++.+.+.+.+.++.++..+-. .++.+++..+.. ....+++++|+
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~--~~~~i~i~~GG 88 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL--GAGDILVVGGG 88 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc--CCCCCEEEEEC
Confidence 4777764443344456777777664 56789999999999998766422 122333322221 23366777777
Q ss_pred CCChhhHHHHHHHhCc
Q psy8225 332 GLRPQVWEPFQKRFGL 347 (479)
Q Consensus 332 ~l~~~~~~~~~~~~~~ 347 (479)
..+++..+.+.+ .|.
T Consensus 89 ~~~~~~~~~~~~-~G~ 103 (122)
T cd02071 89 IIPPEDYELLKE-MGV 103 (122)
T ss_pred CCCHHHHHHHHH-CCC
Confidence 766766666654 354
No 272
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=32.28 E-value=79 Score=22.65 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=35.0
Q ss_pred HHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeee
Q psy8225 82 ANFFKSK-GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 82 a~~L~~~-gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l 123 (479)
.++|.+. |++.|+.++.+.....|.+..+=|++++.-+-+..
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~ 45 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELAT 45 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEe
Confidence 4567665 99999999999999999999999999987655443
No 273
>PRK06145 acyl-CoA synthetase; Validated
Probab=31.60 E-value=4.7e+02 Score=26.13 Aligned_cols=82 Identities=6% Similarity=-0.015 Sum_probs=56.1
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH--HHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEe
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEY--VCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIY 146 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 146 (479)
+|+ .+...+. ......++..++++....|-...+ ....++++..|+..+. .+...+..+...+++.++.++..
T Consensus 169 ~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~~i~~~~~t~~~~ 244 (497)
T PRK06145 169 HSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRI-HREFDPEAVLAAIERHRLTCAWM 244 (497)
T ss_pred EecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEE-CCcCCHHHHHHHHHHhCCeEEEe
Confidence 788 8765433 333445889999988887753222 2233556677776554 45678888999999999999998
Q ss_pred ChhhHHHHH
Q psy8225 147 GAELSEALT 155 (479)
Q Consensus 147 ~~~~~~~~~ 155 (479)
.......+.
T Consensus 245 ~P~~~~~ll 253 (497)
T PRK06145 245 APVMLSRVL 253 (497)
T ss_pred hHHHHHHHH
Confidence 877665543
No 274
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=31.14 E-value=1.2e+02 Score=28.79 Aligned_cols=44 Identities=14% Similarity=0.261 Sum_probs=37.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceee
Q psy8225 78 SNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAA 121 (479)
Q Consensus 78 ~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 121 (479)
.+.+...+.++|+.+++.|.+++.++.....+++++..+|..-+
T Consensus 254 ~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 254 AEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred HHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 46677778888999999999999999999999999999997533
No 275
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=30.91 E-value=2.6e+02 Score=28.58 Aligned_cols=76 Identities=16% Similarity=-0.008 Sum_probs=56.5
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..+++++|++...+|-.-. ++..+++++..|+.++..+ .+...++...++..++..++
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 126 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCE--FTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFF 126 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEE
Confidence 5788888766555443 4578899999888776543 3566788999999888655 56778888888888888876
Q ss_pred Ee
Q psy8225 303 YI 304 (479)
Q Consensus 303 ~~ 304 (479)
..
T Consensus 127 ~~ 128 (547)
T PRK06087 127 AP 128 (547)
T ss_pred Ee
Confidence 64
No 276
>PRK08246 threonine dehydratase; Provisional
Probab=30.80 E-value=4.5e+02 Score=24.68 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=44.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 92 RGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 92 ~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
+++.|... ..+-.-..+.++|.+.|..+..+-|...+++....++..++++++++...
T Consensus 67 ~~~~vv~a-SsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~ 124 (310)
T PRK08246 67 PAAGVVAA-SGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEY 124 (310)
T ss_pred cCCeEEEe-CCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCH
Confidence 45555444 44666677778888999988888887777778889999999999997643
No 277
>PRK10595 SOS cell division inhibitor; Provisional
Probab=30.67 E-value=2.4e+02 Score=23.65 Aligned_cols=53 Identities=9% Similarity=0.057 Sum_probs=35.1
Q ss_pred HHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeec--C-CcchHHHHH
Q psy8225 82 ANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFIN--T-NQRQHILIH 134 (479)
Q Consensus 82 a~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~--~-~~~~~~l~~ 134 (479)
+.+|.+.|+..+..+.|...+..+.+-++-=|++.|...+.|- | ....+++++
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RR 125 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHAR 125 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHH
Confidence 3467788998877666766777787777777777776444442 3 555555443
No 278
>PLN02574 4-coumarate--CoA ligase-like
Probab=30.54 E-value=3.2e+02 Score=28.07 Aligned_cols=83 Identities=18% Similarity=0.029 Sum_probs=59.4
Q ss_pred EeehHHHHHHhhhhhh---h-cCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 227 VMTHVRAMFMAISGRY---Q-TGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~-~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
.+|...+...+..+.. . .+++++|++...++-... +...+++++..|+..+..+ .....++...+.+.++..+
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~ 143 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVY--FPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLA 143 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcch--HHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEE
Confidence 3677777655544443 3 678899999888876543 3456778888999888665 4677888888898888888
Q ss_pred EEehHHHHHH
Q psy8225 302 QYIGEMCRYL 311 (479)
Q Consensus 302 ~~~p~~l~~l 311 (479)
+..+.....+
T Consensus 144 ~~~~~~~~~~ 153 (560)
T PLN02574 144 FTSPENVEKL 153 (560)
T ss_pred EECHHHHHHH
Confidence 8776655443
No 279
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=30.18 E-value=1.2e+02 Score=20.19 Aligned_cols=41 Identities=20% Similarity=0.299 Sum_probs=33.0
Q ss_pred hhcccchhHHHHHHHhhcCCCccccEEEEeh-hhHHHHHHHHHHHHHcCCC
Q psy8225 42 QKTLPTYARPLFVRTIREVPMTGAYKYTVTF-QVEDHSNRIANFFKSKGLQ 91 (479)
Q Consensus 42 ~~~~~~~l~~~l~~~~~~~p~~~a~~~~~Ty-~l~~~~~~la~~L~~~gi~ 91 (479)
....|..|.+-+....+.+| .| |-.-...++|.+|.+.|.+
T Consensus 3 ~aeiPe~L~~~m~~fie~hP---------~WDQ~Rl~~aALa~FL~QnG~~ 44 (57)
T PF10929_consen 3 EAEIPEDLHQAMKDFIETHP---------NWDQYRLFQAALAGFLLQNGCQ 44 (57)
T ss_pred cccccHHHHHHHHHHHHcCC---------CchHHHHHHHHHHHHHHHcCch
Confidence 34577778888888888888 47 8888889999999998854
No 280
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=30.08 E-value=72 Score=27.53 Aligned_cols=29 Identities=17% Similarity=0.383 Sum_probs=25.3
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEE
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVAL 98 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i 98 (479)
+|| ++.+.+.++|..+++.|.+|.-.|+|
T Consensus 7 vSw~~I~~~~~~lA~kI~~s~~~PDvIiai 36 (192)
T COG2236 7 VSWEEIHRLCRALAEKIRASGFKPDVIVAI 36 (192)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCEEEEE
Confidence 799 99999999999999999998754443
No 281
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=30.05 E-value=4.9e+02 Score=26.16 Aligned_cols=68 Identities=15% Similarity=0.016 Sum_probs=47.1
Q ss_pred HcCCCCCCEEEEEcCCchHH-HHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHHHHH
Q psy8225 87 SKGLQRGDAVALFMEGQPEY-VCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSEALT 155 (479)
Q Consensus 87 ~~gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 155 (479)
..++++++++....+-.... ....+..+..|+..+.. +...++++...+++.++.+++........+.
T Consensus 190 ~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 258 (509)
T PRK12406 190 IYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFIRLL 258 (509)
T ss_pred hcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHHHHH
Confidence 44889999888776643221 22333445667766544 5678899999999999999999887655443
No 282
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=30.03 E-value=2.5e+02 Score=26.50 Aligned_cols=57 Identities=7% Similarity=-0.048 Sum_probs=41.4
Q ss_pred CCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 93 GDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 93 gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
++.|.... .+-.-..+.++|...|..+..+-|...+..-...++..++++++++...
T Consensus 70 ~~~vv~~S-sGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~ 126 (324)
T cd01563 70 VKAVACAS-TGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNF 126 (324)
T ss_pred CCEEEEeC-CCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcH
Confidence 44554442 3334445557888999988888777777777889999999999998643
No 283
>PLN02479 acetate-CoA ligase
Probab=29.56 E-value=3.5e+02 Score=27.79 Aligned_cols=80 Identities=10% Similarity=-0.063 Sum_probs=59.2
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..+++++|++...+|-.-. ++..+++++..|+..+... .+...++...+++.++..++
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPA--MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVM 122 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH--HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEE
Confidence 4677777766655544 3478999999888875443 3456778888898887665 56788888999999999988
Q ss_pred EehHHH
Q psy8225 303 YIGEMC 308 (479)
Q Consensus 303 ~~p~~l 308 (479)
..+..+
T Consensus 123 ~~~~~~ 128 (567)
T PLN02479 123 VDQEFF 128 (567)
T ss_pred Echhhh
Confidence 866543
No 284
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=29.42 E-value=2.1e+02 Score=26.42 Aligned_cols=59 Identities=17% Similarity=0.240 Sum_probs=37.3
Q ss_pred EEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHH---HHHHHHhccceEEEeChhhHHH
Q psy8225 95 AVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHI---LIHSIKVAECKAIIYGAELSEA 153 (479)
Q Consensus 95 ~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~vi~~~~~~~~ 153 (479)
+..+...+...++.-.+++-..+..-.-=...-++.+ +...++..++++||++......
T Consensus 172 ~~~v~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~ 233 (282)
T cd01017 172 KTFVTQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSK 233 (282)
T ss_pred CeEEEecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH
Confidence 4566777788888877777666532111122234444 4556778889999998766543
No 285
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=29.40 E-value=1.7e+02 Score=25.35 Aligned_cols=77 Identities=13% Similarity=0.117 Sum_probs=48.4
Q ss_pred HHHHHHhhcCCCccccEEE------Eeh-hhHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeee
Q psy8225 51 PLFVRTIREVPMTGAYKYT------VTF-QVEDHSNRIANFFK-SKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAF 122 (479)
Q Consensus 51 ~~l~~~~~~~p~~~a~~~~------~Ty-~l~~~~~~la~~L~-~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~ 122 (479)
+++.|+----|-++.+... -.- ...++.+-+++.+. +.+++++|.+.+++.. |..++|
T Consensus 55 Ev~yRAGGLa~~~pIL~~plMLhega~ass~lErieg~~~~~l~~~~i~~~DVliviSnS--------------GrNpvp 120 (243)
T COG4821 55 EVFYRAGGLAPIKPILMEPLMLHEGAVASSYLERIEGYAKLFLHRLQIRPNDVLIVISNS--------------GRNPVP 120 (243)
T ss_pred HHHhhcCCccccccccCChhhhcccccccchhHhhhhHHHHHHHHhcCCCCCEEEEEeCC--------------CCCCcc
Confidence 4444444444444444333 223 44557777777655 4599999977776654 455565
Q ss_pred ecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 123 INTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
| ++....+.-+|++|.+.+
T Consensus 121 i-------e~A~~~rekGa~vI~vTS 139 (243)
T COG4821 121 I-------EVAEYAREKGAKVIAVTS 139 (243)
T ss_pred h-------HHHHHHHhcCCeEEEEeh
Confidence 5 677788888999988765
No 286
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=29.37 E-value=4.2e+02 Score=25.24 Aligned_cols=54 Identities=15% Similarity=0.141 Sum_probs=32.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC----cchHHHHHHHHhccceEEEe
Q psy8225 90 LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN----QRQHILIHSIKVAECKAIIY 146 (479)
Q Consensus 90 i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~ 146 (479)
+++||.|++-.|. |.....++...|+.++.++.. ...+++...+...++++|+.
T Consensus 97 ~~~gd~Vlv~~p~---y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l 154 (351)
T PRK14807 97 INKGDVVIYPHPS---FAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFL 154 (351)
T ss_pred cCCCCEEEEeCCC---hHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEE
Confidence 5678888776543 223334556677776666432 34566666665556777664
No 287
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=29.32 E-value=2.3e+02 Score=25.88 Aligned_cols=94 Identities=12% Similarity=0.129 Sum_probs=51.5
Q ss_pred HhhcCCCccccEEEEeh-hhHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcch---
Q psy8225 56 TIREVPMTGAYKYTVTF-QVEDHSNRIANFFKSK--GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQ--- 129 (479)
Q Consensus 56 ~~~~~p~~~a~~~~~Ty-~l~~~~~~la~~L~~~--gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~--- 129 (479)
..+..|+.-..... .+ ++.++.+.+-..+++. .+ + ++..+...+...++.-.+++-..+.. .+ ....++
T Consensus 132 L~~~dP~~~~~y~~-N~~~~~~~L~~l~~~~~~~~~~~-~-~~~~v~~H~af~Y~~~~ygl~~~~~~-~~-~~eps~~~l 206 (266)
T cd01018 132 LAELDPQNATYYQA-NLDALLAELDALDSEIRTILSKL-K-QRAFMVYHPAWGYFARDYGLTQIPIE-EE-GKEPSPADL 206 (266)
T ss_pred HHHhCcccHHHHHH-HHHHHHHHHHHHHHHHHHHHhcC-C-CCeEEEECchhHHHHHHcCCEEEecC-CC-CCCCCHHHH
Confidence 34455655433332 23 3333444444444333 22 2 35667788888888887777766431 11 112233
Q ss_pred HHHHHHHHhccceEEEeChhhHHHH
Q psy8225 130 HILIHSIKVAECKAIIYGAELSEAL 154 (479)
Q Consensus 130 ~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (479)
.++...++..++++||++.......
T Consensus 207 ~~l~~~ik~~~v~~if~e~~~~~~~ 231 (266)
T cd01018 207 KRLIDLAKEKGVRVVFVQPQFSTKS 231 (266)
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcHH
Confidence 4556677888999999987654433
No 288
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.99 E-value=4.4e+02 Score=26.81 Aligned_cols=89 Identities=7% Similarity=-0.107 Sum_probs=58.9
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCCCC-CEEEEEcCCc--hHHHHHHHHhhhcCceeeee
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQRG-DAVALFMEGQ--PEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~~g-d~V~i~~~n~--~e~~~~~lA~~~~G~~~v~l 123 (479)
.++.++++.. +|+ .+...+..+.. ..++.++ |++...+|-. ..++..+++.+..|+..+.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 4566777766 788 87665544433 3467776 7887777654 34444566778889888777
Q ss_pred cCCc---chHHHHHHHHhccceEEEeChhhH
Q psy8225 124 NTNQ---RQHILIHSIKVAECKAIIYGAELS 151 (479)
Q Consensus 124 ~~~~---~~~~l~~~l~~~~~~~vi~~~~~~ 151 (479)
.+.. .+..+..++++.++.++.+.....
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 257 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPNFAY 257 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECchHHH
Confidence 6532 456678889999999876544333
No 289
>PRK06178 acyl-CoA synthetase; Validated
Probab=28.74 E-value=3.7e+02 Score=27.57 Aligned_cols=83 Identities=17% Similarity=0.039 Sum_probs=61.3
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..++++++++...++-...+ +..+++++..|+..+... ......+...+++.++..+.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii 135 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF--HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLL 135 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH--HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEE
Confidence 4788777766555443 45788899998888766543 456777888898877554 56788889999999999999
Q ss_pred EehHHHHHH
Q psy8225 303 YIGEMCRYL 311 (479)
Q Consensus 303 ~~p~~l~~l 311 (479)
..+.....+
T Consensus 136 ~~~~~~~~l 144 (567)
T PRK06178 136 ALDQLAPVV 144 (567)
T ss_pred EccchHHHH
Confidence 887765543
No 290
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=28.60 E-value=3.4e+02 Score=25.26 Aligned_cols=55 Identities=9% Similarity=0.187 Sum_probs=42.2
Q ss_pred CEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 94 DAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 94 d~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
+.|... ..+-.-..+.++|.+.|..++.+-|...+.+....++..++++++++..
T Consensus 66 ~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~ 120 (304)
T cd01562 66 KGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGED 120 (304)
T ss_pred CcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 344444 4466666777788889998888877777777888999999999999865
No 291
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=27.97 E-value=26 Score=16.44 Aligned_cols=9 Identities=33% Similarity=0.505 Sum_probs=6.4
Q ss_pred eccccccCc
Q psy8225 353 FYGATEGNA 361 (479)
Q Consensus 353 ~YG~tE~~~ 361 (479)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888653
No 292
>PRK13390 acyl-CoA synthetase; Provisional
Probab=27.76 E-value=5.8e+02 Score=25.58 Aligned_cols=78 Identities=14% Similarity=-0.044 Sum_probs=56.8
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..++.++|++...++-+..+ +..+++++..|+..+... .+.+.++...++..++..+
T Consensus 23 ~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~--~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~ 100 (501)
T PRK13390 23 EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA--LVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVL 100 (501)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEE
Confidence 35888888776666554 34688999998887765543 566778888999887655 4677788888888888877
Q ss_pred EEeh
Q psy8225 302 QYIG 305 (479)
Q Consensus 302 ~~~p 305 (479)
....
T Consensus 101 i~~~ 104 (501)
T PRK13390 101 VASA 104 (501)
T ss_pred EEcc
Confidence 6544
No 293
>PRK01322 6-carboxyhexanoate--CoA ligase; Provisional
Probab=27.64 E-value=62 Score=28.91 Aligned_cols=26 Identities=15% Similarity=0.094 Sum_probs=16.0
Q ss_pred CcEEEcCCeeEE---------ec-CCcEEEecCCCC
Q psy8225 452 DAAFNTGDILIK---------DK-FQYFYFKDRTGD 477 (479)
Q Consensus 452 ~g~~~TGD~g~~---------d~-dG~l~~~GR~~d 477 (479)
.||+.|.++||. ++ .|++||+....|
T Consensus 188 TGYVA~~~~gY~RI~~mK~~G~~~GGRvffv~~~~~ 223 (242)
T PRK01322 188 TGYVATKKLGYHRITNLKEEGTPYGGRIFFVDDSID 223 (242)
T ss_pred eEEEEeCCCCeEeCccccccCCCCCCEEEEEeCccC
Confidence 456666666554 12 488888876533
No 294
>PRK08638 threonine dehydratase; Validated
Probab=27.62 E-value=4.4e+02 Score=25.09 Aligned_cols=54 Identities=6% Similarity=0.051 Sum_probs=42.6
Q ss_pred EEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhH
Q psy8225 98 LFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS 151 (479)
Q Consensus 98 i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 151 (479)
+....+-.-..+.++|...|..+..+-|...+......++..++++++++....
T Consensus 79 v~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 132 (333)
T PRK08638 79 VACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFN 132 (333)
T ss_pred EEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHH
Confidence 334445566777888899999988888887778888899999999999975543
No 295
>PF07494 Reg_prop: Two component regulator propeller; InterPro: IPR011110 A large group of two component regulator proteins appear to have the same N-terminal structure of 14 tandem repeats. These repeats show homology to members of IPR002372 from INTERPRO and IPR001680 from INTERPRO indicating that they are likely to form a beta-propeller. This family has been built with artificially high cut-offs in order to avoid overlaps with other beta-propeller families. The fourteen repeats are likely to form two propellers; it is not clear if these structures are likely to recruit other proteins or interact with DNA.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.
Probab=27.38 E-value=52 Score=17.28 Aligned_cols=11 Identities=9% Similarity=0.135 Sum_probs=7.3
Q ss_pred EEecCCcEEEe
Q psy8225 462 IKDKFQYFYFK 472 (479)
Q Consensus 462 ~~d~dG~l~~~ 472 (479)
+.|.+|+|||-
T Consensus 11 ~~D~~G~lWig 21 (24)
T PF07494_consen 11 YEDSDGNLWIG 21 (24)
T ss_dssp EE-TTSCEEEE
T ss_pred EEcCCcCEEEE
Confidence 45788888874
No 296
>PRK06721 threonine synthase; Reviewed
Probab=27.28 E-value=3.3e+02 Score=26.15 Aligned_cols=55 Identities=7% Similarity=-0.008 Sum_probs=39.0
Q ss_pred EEEEEcCCchHHHHHHHHhhhcCceeeeecCCc-chHHHHHHHHhccceEEEeChhh
Q psy8225 95 AVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQ-RQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 95 ~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
.|... ..+-.-..+.++|...|..++.+-|.. .+..-...++..++++++++...
T Consensus 77 ~vV~a-SsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~ 132 (352)
T PRK06721 77 AIICA-STGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNF 132 (352)
T ss_pred EEEEE-CCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 44333 344455667777889999888887765 35556678899999999997643
No 297
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=27.23 E-value=3.2e+02 Score=26.89 Aligned_cols=56 Identities=5% Similarity=0.017 Sum_probs=45.6
Q ss_pred EEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhH
Q psy8225 96 VALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS 151 (479)
Q Consensus 96 V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 151 (479)
-.+....+-.-+.+.++|...|..++.+-|...+.+-...++..++++++++....
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~ 191 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYS 191 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHH
Confidence 34555556666778889999999999888888888999999999999999976543
No 298
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=27.13 E-value=3.1e+02 Score=27.25 Aligned_cols=57 Identities=4% Similarity=-0.011 Sum_probs=45.9
Q ss_pred EEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhHH
Q psy8225 96 VALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELSE 152 (479)
Q Consensus 96 V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 152 (479)
-.+....+-.-..+.++|...|..++.+-|...+..-...++..+++++++......
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~ 210 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGV 210 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 344555556667778888899999999988888888999999999999999875433
No 299
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only]
Probab=27.06 E-value=1.5e+02 Score=27.06 Aligned_cols=58 Identities=14% Similarity=0.350 Sum_probs=41.2
Q ss_pred chhHHHHHHHhhcCCCccccEEE---------Eeh-hhHHHHHHHHHHHHHc--CCCCCC-EEEEEcCCchHHH
Q psy8225 47 TYARPLFVRTIREVPMTGAYKYT---------VTF-QVEDHSNRIANFFKSK--GLQRGD-AVALFMEGQPEYV 107 (479)
Q Consensus 47 ~~l~~~l~~~~~~~p~~~a~~~~---------~Ty-~l~~~~~~la~~L~~~--gi~~gd-~V~i~~~n~~e~~ 107 (479)
..+.+++.++.+. .||+++. --| +|.-.+..+.++|... |++.++ .|.|..-|.++.+
T Consensus 197 r~Ihely~rA~~~---aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvtIaaTN~p~~L 267 (368)
T COG1223 197 RRIHELYERARKA---APCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVTIAATNRPELL 267 (368)
T ss_pred HHHHHHHHHHHhc---CCeEEEehhhhhhhhhhhHHHhcccHHHHHHHHHHhccCcccCCceEEEeecCChhhc
Confidence 3456666665444 4555554 568 8988888888888764 888877 6777888888765
No 300
>PRK05638 threonine synthase; Validated
Probab=26.78 E-value=2.9e+02 Score=27.53 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=40.9
Q ss_pred CEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhH
Q psy8225 94 DAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS 151 (479)
Q Consensus 94 d~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 151 (479)
+.|+. ...+-.-..+...+.++|..+..+-|...+..-...++..++++++++....
T Consensus 113 ~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~~~~ 169 (442)
T PRK05638 113 NGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGESVD 169 (442)
T ss_pred CEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECCCHH
Confidence 34544 4444455555566778899888887776677778899999999999976543
No 301
>PRK08813 threonine dehydratase; Provisional
Probab=26.64 E-value=5.8e+02 Score=24.52 Aligned_cols=54 Identities=9% Similarity=0.017 Sum_probs=43.2
Q ss_pred EEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 97 ALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 97 ~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
.+....+-.-....++|...|..+..+-|...+......++..+++++.+...+
T Consensus 84 VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~ 137 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSY 137 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 345555666677788999999988888888777788888999999999997654
No 302
>PRK12582 acyl-CoA synthetase; Provisional
Probab=26.60 E-value=3.3e+02 Score=28.47 Aligned_cols=77 Identities=13% Similarity=-0.124 Sum_probs=55.1
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC-CC-----hhHHHHHHHHh
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK-FS-----ASNFWKDCIKY 296 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~-~~-----~~~~~~~i~~~ 296 (479)
-.+|...+...+..+.. ..+++++|++...++-.. .++..+++++..|+..+.... +. ..++...+++.
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~ 156 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI--EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLV 156 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhc
Confidence 46788888776665554 447889999988888544 335667788889998887653 33 26778888888
Q ss_pred cccEEEEe
Q psy8225 297 NCTVAQYI 304 (479)
Q Consensus 297 ~~t~~~~~ 304 (479)
++..++..
T Consensus 157 ~~~~vi~~ 164 (624)
T PRK12582 157 KPRVVFAQ 164 (624)
T ss_pred CCcEEEec
Confidence 88877654
No 303
>TIGR01204 bioW 6-carboxyhexanoate--CoA ligase. Alternate name: pimeloyl-CoA synthase.
Probab=26.46 E-value=70 Score=28.37 Aligned_cols=24 Identities=13% Similarity=0.077 Sum_probs=14.6
Q ss_pred CcEEEcCCeeEE----------ecCCcEEEecCC
Q psy8225 452 DAAFNTGDILIK----------DKFQYFYFKDRT 475 (479)
Q Consensus 452 ~g~~~TGD~g~~----------d~dG~l~~~GR~ 475 (479)
.||..|.++||. ...|++||+.+.
T Consensus 181 TGYVA~~~~gY~RI~~lK~~G~~~GGRvffv~~~ 214 (232)
T TIGR01204 181 TGYVSGKEIGYVRITPLKEKGDELGGRVFFVSRK 214 (232)
T ss_pred eEEEEeCCCCeEeCccccccCCCCCCEEEEEeCC
Confidence 456666665554 123888888764
No 304
>KOG1252|consensus
Probab=26.32 E-value=4.2e+02 Score=25.24 Aligned_cols=60 Identities=5% Similarity=-0.043 Sum_probs=50.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 90 LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 90 i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
+.||..+.+=.-.+---+...+.|...|..++.+-|..-..|-..+|+..++++|.++.+
T Consensus 100 i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 100 ITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred ccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 678877766666666667788889999999999999988889999999999999999754
No 305
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=26.31 E-value=4e+02 Score=27.80 Aligned_cols=82 Identities=12% Similarity=-0.050 Sum_probs=58.3
Q ss_pred EEeehHHHHHHhhhhhhhc--CCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-CC-CC--hhHHHHHHHHhccc
Q psy8225 226 AVMTHVRAMFMAISGRYQT--GLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-SK-FS--ASNFWKDCIKYNCT 299 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~~~--~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~-~~--~~~~~~~i~~~~~t 299 (479)
..+|...+...+..+...+ .++++|++...++-... ++..+++++..|+..+.. +. .. .+++...+++.++.
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 144 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPT 144 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh--HHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCC
Confidence 3578888776665544322 26889999888887654 356678889999988755 22 22 56788889999999
Q ss_pred EEEEehHHHH
Q psy8225 300 VAQYIGEMCR 309 (479)
Q Consensus 300 ~~~~~p~~l~ 309 (479)
.+...+....
T Consensus 145 ~li~~~~~~~ 154 (612)
T PRK12476 145 VVLTTTAAAE 154 (612)
T ss_pred EEEEcHHHHH
Confidence 9888765544
No 306
>PLN02550 threonine dehydratase
Probab=26.29 E-value=5.8e+02 Score=26.62 Aligned_cols=59 Identities=14% Similarity=0.193 Sum_probs=45.4
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 89 GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 89 gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
..++| .|. ...+-....+.++|.++|..+..+-|...+..-...++..++++++++..+
T Consensus 155 ~~~~G-VV~--aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g~~~ 213 (591)
T PLN02550 155 QLDKG-VIC--SSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSY 213 (591)
T ss_pred cCCCC-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCH
Confidence 34555 444 445555666778899999999999888888877888999999999997643
No 307
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=26.19 E-value=4.2e+02 Score=25.73 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=42.3
Q ss_pred EEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 98 LFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 98 i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
+....+-.-....++|.+.|..+..+-|...+.+-...++..++++++++..
T Consensus 52 v~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 103 (380)
T TIGR01127 52 VAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDD 103 (380)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEECCC
Confidence 3444455667777889999999998888888888889999999999999764
No 308
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.08 E-value=4.2e+02 Score=26.97 Aligned_cols=80 Identities=9% Similarity=-0.083 Sum_probs=57.2
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..++++++++...++-... ++..+++++..|+..+... ......+...+++.++..+.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~--~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii 119 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE--FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVV 119 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEE
Confidence 5778777766555443 3478889998877775443 3466778888899888665 45778888888888998887
Q ss_pred EehHHH
Q psy8225 303 YIGEMC 308 (479)
Q Consensus 303 ~~p~~l 308 (479)
..+...
T Consensus 120 ~~~~~~ 125 (542)
T PRK07786 120 TEAALA 125 (542)
T ss_pred EccchH
Confidence 765543
No 309
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=25.85 E-value=4.7e+02 Score=27.68 Aligned_cols=81 Identities=6% Similarity=-0.138 Sum_probs=59.5
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..++.++|++...++-..- ++...++++..|+..+... ...++++...++..++++++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~ 153 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVF 153 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEE
Confidence 3588777766655543 4578999998888776543 3456778888898877554 56888899999999999998
Q ss_pred EehHHHH
Q psy8225 303 YIGEMCR 309 (479)
Q Consensus 303 ~~p~~l~ 309 (479)
.....+.
T Consensus 154 ~~~~~~~ 160 (660)
T PLN02430 154 VQDKKIK 160 (660)
T ss_pred ECHHHHH
Confidence 8765433
No 310
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=25.63 E-value=5.9e+02 Score=24.25 Aligned_cols=10 Identities=0% Similarity=-0.250 Sum_probs=4.4
Q ss_pred chHHHHHHHH
Q psy8225 128 RQHILIHSIK 137 (479)
Q Consensus 128 ~~~~l~~~l~ 137 (479)
..+++...++
T Consensus 116 d~~~l~~~l~ 125 (363)
T TIGR02326 116 DVVEVEAILA 125 (363)
T ss_pred CHHHHHHHHh
Confidence 3344444444
No 311
>PRK06060 acyl-CoA synthetase; Validated
Probab=25.55 E-value=4.2e+02 Score=28.25 Aligned_cols=79 Identities=18% Similarity=0.116 Sum_probs=56.9
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..++.+++++...++-+..+ +..+++++..|+..+..+ .....++...+++.++.+++
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~--~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi 107 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL--VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVV 107 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEE
Confidence 3788888766655443 45788999998888866543 466778888898777655 45667777888888888877
Q ss_pred EehHH
Q psy8225 303 YIGEM 307 (479)
Q Consensus 303 ~~p~~ 307 (479)
.....
T Consensus 108 ~~~~~ 112 (705)
T PRK06060 108 TSDAL 112 (705)
T ss_pred EchHH
Confidence 65543
No 312
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=25.52 E-value=2.1e+02 Score=23.06 Aligned_cols=50 Identities=10% Similarity=0.120 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHc-CCCCCCEEEEEcC--CchHHHHHHHHhhhcCceeeee
Q psy8225 74 VEDHSNRIANFFKSK-GLQRGDAVALFME--GQPEYVCMWLGLSKIGVVAAFI 123 (479)
Q Consensus 74 l~~~~~~la~~L~~~-gi~~gd~V~i~~~--n~~e~~~~~lA~~~~G~~~v~l 123 (479)
-.+.-.-+++.+.+. .+++||.+.+++. |++..+-+...+...|+.++.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 84 DLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred ccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 334445666777665 6899998877776 6677788888888999887765
No 313
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=25.43 E-value=3.1e+02 Score=27.24 Aligned_cols=56 Identities=16% Similarity=0.129 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCchHH--HHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 90 LQRGDAVALFMEGQPEY--VCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 90 i~~gd~V~i~~~n~~e~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
+++||.|.+..+ +... -..-..+.+.|+.+..++....++++...++. +.++|++.
T Consensus 97 l~~GD~VI~~~~-~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e 154 (432)
T PRK06702 97 CSSGDHLLCSST-VYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAE 154 (432)
T ss_pred cCCCCEEEECCC-chHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEE
Confidence 578887765333 2221 11222356778888888776677777777754 56777764
No 314
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=25.27 E-value=4.5e+02 Score=26.14 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=25.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcc----hHHHHHHHHh
Q psy8225 92 RGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQR----QHILIHSIKV 138 (479)
Q Consensus 92 ~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~----~~~l~~~l~~ 138 (479)
.|.+|+|.......+-++-+-. .+|+.++.+..... .+++..+++.
T Consensus 302 ~gkrv~i~g~~~~~~~la~~L~-elGm~v~~~~~~~~~~~~~~~~~~~l~~ 351 (435)
T cd01974 302 HGKKFALYGDPDFLIGLTSFLL-ELGMEPVHVLTGNGGKRFEKEMQALLDA 351 (435)
T ss_pred CCCEEEEEcChHHHHHHHHHHH-HCCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 4778888887655444444433 78887755432222 2345555554
No 315
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.10 E-value=8e+02 Score=25.61 Aligned_cols=82 Identities=10% Similarity=-0.080 Sum_probs=56.0
Q ss_pred EEeehHHHHHHhhhhhhhcC--CCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-CCCC---hhHHHHHHHHhccc
Q psy8225 226 AVMTHVRAMFMAISGRYQTG--LTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-SKFS---ASNFWKDCIKYNCT 299 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~~~~--~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~~~---~~~~~~~i~~~~~t 299 (479)
..+|...+...+..+...+. ++++|++...++-+.. ++..+++++..|+..+.. .... ..++...+++.++.
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 131 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLD--YLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPS 131 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChH--HHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCC
Confidence 35788888766655543321 6889999888876643 346677888899887754 2222 45677888888999
Q ss_pred EEEEehHHHH
Q psy8225 300 VAQYIGEMCR 309 (479)
Q Consensus 300 ~~~~~p~~l~ 309 (479)
.++.......
T Consensus 132 ~vi~~~~~~~ 141 (631)
T PRK07769 132 AILTTTDSAE 141 (631)
T ss_pred EEEEChHHHH
Confidence 8888765443
No 316
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=25.03 E-value=3.3e+02 Score=27.35 Aligned_cols=57 Identities=14% Similarity=0.081 Sum_probs=44.0
Q ss_pred CCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC----CCChhHHHHHHHHhcccEEEEehHH
Q psy8225 246 LTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS----KFSASNFWKDCIKYNCTVAQYIGEM 307 (479)
Q Consensus 246 ~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~p~~ 307 (479)
.+++|+++.--|-|+..-. + .-..|..++-.+ ..+++.+-+.+.++++..++.+|++
T Consensus 176 ~~pGd~v~vE~PtY~~~~~---~--~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQ---A--LEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCCEEEEcCCCcHHHHH---H--HHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 4689999999998876422 2 233577777654 4688999999999999999999987
No 317
>PRK12483 threonine dehydratase; Reviewed
Probab=24.81 E-value=5.3e+02 Score=26.45 Aligned_cols=53 Identities=9% Similarity=0.228 Sum_probs=43.2
Q ss_pred EEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 98 LFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 98 i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
+....+-.-..+.++|..+|..++.+-|...+..-...++..+++++++...+
T Consensus 89 V~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~ 141 (521)
T PRK12483 89 ITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESF 141 (521)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 34444556677788999999999999888888888889999999999997654
No 318
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=24.79 E-value=5e+02 Score=26.37 Aligned_cols=86 Identities=9% Similarity=-0.040 Sum_probs=57.3
Q ss_pred CCCccccEEE------------Eeh-hhHHHHHHHHHHHHHcCCC-CCCEEEEEcCCchHH-HHHHHHhhhcCceeeeec
Q psy8225 60 VPMTGAYKYT------------VTF-QVEDHSNRIANFFKSKGLQ-RGDAVALFMEGQPEY-VCMWLGLSKIGVVAAFIN 124 (479)
Q Consensus 60 ~p~~~a~~~~------------~Ty-~l~~~~~~la~~L~~~gi~-~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~v~l~ 124 (479)
.++.+|++.. +|+ .+...+..++.. .++. ++|++...+|-...+ +..+++.+..|+.++...
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 4566777765 788 887776655543 3677 888888887754332 234567778888777654
Q ss_pred C-Cc--chHHHHHHHHhccceEEEeCh
Q psy8225 125 T-NQ--RQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 125 ~-~~--~~~~l~~~l~~~~~~~vi~~~ 148 (479)
. .+ .+..+...+++.++..+.+..
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~p~ 253 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAAPN 253 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeCCc
Confidence 3 12 356778888999988765433
No 319
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.74 E-value=3.8e+02 Score=27.47 Aligned_cols=79 Identities=15% Similarity=0.060 Sum_probs=57.0
Q ss_pred EeehHHHHHHhhhhhhh----cCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 227 VMTHVRAMFMAISGRYQ----TGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~~----~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
.+|...+...+..+... .+++.++++....+-.. .+...+++++..|+..+..+ ......+...+++.++..+
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 125 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLL--QYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAI 125 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEE
Confidence 56777776665554442 46788899888776543 33466778889999988665 4577888889999999988
Q ss_pred EEehHH
Q psy8225 302 QYIGEM 307 (479)
Q Consensus 302 ~~~p~~ 307 (479)
...+..
T Consensus 126 i~~~~~ 131 (560)
T PRK08974 126 VIVSNF 131 (560)
T ss_pred EEeccc
Confidence 776543
No 320
>PRK07867 acyl-CoA synthetase; Validated
Probab=24.70 E-value=5e+02 Score=26.39 Aligned_cols=81 Identities=12% Similarity=-0.012 Sum_probs=58.0
Q ss_pred EeehHHHHHHhhhhhhhc----CCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 227 VMTHVRAMFMAISGRYQT----GLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~~~----~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
.+|...+...+..+...+ +..+++++...++-.- .++..+++++..|+.++..+ ...++++...+++.++..+
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 478877776665554432 4567788777776433 33466778889999988655 5678888999999999998
Q ss_pred EEehHHHH
Q psy8225 302 QYIGEMCR 309 (479)
Q Consensus 302 ~~~p~~l~ 309 (479)
+.......
T Consensus 106 i~~~~~~~ 113 (529)
T PRK07867 106 LTESAHAE 113 (529)
T ss_pred EECHhHHH
Confidence 88775554
No 321
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.52 E-value=3.7e+02 Score=27.57 Aligned_cols=79 Identities=18% Similarity=0.113 Sum_probs=57.2
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..+++.+|++...++-...+ +..+++++..|+..+... .+...++...++..+++.+.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii 126 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVIL 126 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEE
Confidence 4777777666555443 34678899998888765543 456778888898877654 56777888888888998887
Q ss_pred EehHH
Q psy8225 303 YIGEM 307 (479)
Q Consensus 303 ~~p~~ 307 (479)
..+..
T Consensus 127 ~~~~~ 131 (563)
T PRK06710 127 CLDLV 131 (563)
T ss_pred Eeccc
Confidence 76543
No 322
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=24.43 E-value=5.6e+02 Score=27.30 Aligned_cols=85 Identities=12% Similarity=-0.027 Sum_probs=62.3
Q ss_pred eEEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-CCCChhHHHHHHHHhcccE
Q psy8225 225 AAVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-SKFSASNFWKDCIKYNCTV 300 (479)
Q Consensus 225 ~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~ 300 (479)
...+|...+...+..+.. ..+++++|++...++-.. .++...++++..|+..+.. +...++++...+++.++..
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 467888888776665544 457899999988887654 3456677888888877654 4567888888888899998
Q ss_pred EEEehHHHHHH
Q psy8225 301 AQYIGEMCRYL 311 (479)
Q Consensus 301 ~~~~p~~l~~l 311 (479)
++.....+..+
T Consensus 197 lv~~~~~~~~l 207 (700)
T PTZ00216 197 IVCNGKNVPNL 207 (700)
T ss_pred EEECHHHHHHH
Confidence 88876655444
No 323
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=24.42 E-value=4.1e+02 Score=27.09 Aligned_cols=80 Identities=11% Similarity=-0.154 Sum_probs=57.4
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEE
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVA 301 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 301 (479)
..+|...+...+..+.. ..++.++|++...++-...+ ...+++++..|+..+..+ .+..+++...+++.++..+
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH--LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVV 115 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH--HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEE
Confidence 35788888766655554 45788999998887765443 345667888898887665 5677888888888888888
Q ss_pred EEehHH
Q psy8225 302 QYIGEM 307 (479)
Q Consensus 302 ~~~p~~ 307 (479)
+.....
T Consensus 116 ~~~~~~ 121 (542)
T PRK06018 116 ITDLTF 121 (542)
T ss_pred EEcccc
Confidence 775543
No 324
>PRK08198 threonine dehydratase; Provisional
Probab=24.37 E-value=5.2e+02 Score=25.36 Aligned_cols=57 Identities=9% Similarity=0.078 Sum_probs=43.6
Q ss_pred CCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 93 GDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 93 gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
++.|...+ .+-.-..+.++|...|..++.+-|...+.+-...++..++++++++...
T Consensus 70 ~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~~~ 126 (404)
T PRK08198 70 ARGVVAAS-AGNHAQGVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDVY 126 (404)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCH
Confidence 34444433 3555666678999999999998888888888888999999999997543
No 325
>PRK09192 acyl-CoA synthetase; Validated
Probab=23.37 E-value=5.9e+02 Score=26.24 Aligned_cols=83 Identities=12% Similarity=-0.014 Sum_probs=58.5
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC-CC-------hhHHHHHHH
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK-FS-------ASNFWKDCI 294 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~-~~-------~~~~~~~i~ 294 (479)
-.+|...+...+..+.. ..++++++++...++.+-. ++..+++++..|+..+..+. +. .+++...++
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGD--FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchh--HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 45788777655554443 3578899999888887543 34667788888998887642 11 567888899
Q ss_pred HhcccEEEEehHHHHH
Q psy8225 295 KYNCTVAQYIGEMCRY 310 (479)
Q Consensus 295 ~~~~t~~~~~p~~l~~ 310 (479)
+.++..+.........
T Consensus 126 ~~~~~~il~~~~~~~~ 141 (579)
T PRK09192 126 SAQPAAIITPDELLPW 141 (579)
T ss_pred hcCCCEEEeChHHHHH
Confidence 9999998877655433
No 326
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=23.36 E-value=2.4e+02 Score=21.43 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=30.8
Q ss_pred HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEE
Q psy8225 84 FFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAII 145 (479)
Q Consensus 84 ~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 145 (479)
.|++.|+..-+.|.+..++..+-+.+.+.+-..+...- +-......+....++..+++.+|
T Consensus 54 ~l~~a~i~~a~~vv~~~~~d~~n~~~~~~~r~~~~~~~-ii~~~~~~~~~~~l~~~g~d~vi 114 (116)
T PF02254_consen 54 VLERAGIEKADAVVILTDDDEENLLIALLARELNPDIR-IIARVNDPENAELLRQAGADHVI 114 (116)
T ss_dssp HHHHTTGGCESEEEEESSSHHHHHHHHHHHHHHTTTSE-EEEEESSHHHHHHHHHTT-SEEE
T ss_pred HHhhcCccccCEEEEccCCHHHHHHHHHHHHHHCCCCe-EEEEECCHHHHHHHHHCCcCEEE
Confidence 45555666666677776666665555555544332111 11122233445555666666665
No 327
>KOG0136|consensus
Probab=23.20 E-value=1.2e+02 Score=31.33 Aligned_cols=29 Identities=21% Similarity=-0.009 Sum_probs=18.8
Q ss_pred CChhhHHHHHHHhCcceeeeeccccccCc
Q psy8225 333 LRPQVWEPFQKRFGLDRICEFYGATEGNA 361 (479)
Q Consensus 333 l~~~~~~~~~~~~~~~~v~~~YG~tE~~~ 361 (479)
.+++..++|........|+-+|.+||.|-
T Consensus 126 ~t~EQ~~~Wl~~a~~~~IiGtYAQTElGH 154 (670)
T KOG0136|consen 126 GTDEQQEKWLSRALNMEIIGTYAQTELGH 154 (670)
T ss_pred CCHHHHHHHHHhcccceEEEeehhhhhcc
Confidence 34454444444444338999999999874
No 328
>PRK07409 threonine synthase; Validated
Probab=23.00 E-value=4.1e+02 Score=25.52 Aligned_cols=50 Identities=6% Similarity=-0.098 Sum_probs=36.8
Q ss_pred cCCchHHHHHHHHhhhcCceeeeecCCc-chHHHHHHHHhccceEEEeChh
Q psy8225 100 MEGQPEYVCMWLGLSKIGVVAAFINTNQ-RQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 100 ~~n~~e~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
...+-.-..+.++|...|..+..+-|.. .+.+-...++..++++++++..
T Consensus 84 aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~~ 134 (353)
T PRK07409 84 ASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDGN 134 (353)
T ss_pred ECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECCC
Confidence 3444446777788899999887777764 4555666778899999999864
No 329
>PRK06110 hypothetical protein; Provisional
Probab=22.65 E-value=6e+02 Score=23.95 Aligned_cols=55 Identities=7% Similarity=0.065 Sum_probs=41.9
Q ss_pred EEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhH
Q psy8225 97 ALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS 151 (479)
Q Consensus 97 ~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 151 (479)
.+....+-.-..+.++|.+.|..+..+-|...+..-...++..+++++.++....
T Consensus 73 vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~ 127 (322)
T PRK06110 73 VISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGEDFQ 127 (322)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 3444466666777889999999888777776666677899999999999975543
No 330
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=22.58 E-value=4.8e+02 Score=28.17 Aligned_cols=86 Identities=16% Similarity=0.033 Sum_probs=62.3
Q ss_pred EEeehHHHHHHhhhhhhh------cCCCCC-----------CeEEEeccchhhhhhHHHHHHHHhcCceEEec-CCCChh
Q psy8225 226 AVMTHVRAMFMAISGRYQ------TGLTSD-----------DVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR-SKFSAS 287 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~~------~~~~~~-----------d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~~~~~ 287 (479)
..+|...+...+..+... .++.++ |++...++-+. .++...++++..|+..+.. +.+.++
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~--ew~~~~lA~~~~Gav~Vpl~~~~~~~ 167 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI--NWLVADLACMLSGVTTLVMHSKFSID 167 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH--HHHHHHHHHHHcCCeEEEecCCCCHH
Confidence 357887777666554432 367776 78877777543 3345667788888887754 568899
Q ss_pred HHHHHHHHhcccEEEEehHHHHHHhc
Q psy8225 288 NFWKDCIKYNCTVAQYIGEMCRYLLA 313 (479)
Q Consensus 288 ~~~~~i~~~~~t~~~~~p~~l~~l~~ 313 (479)
++...++.-++.+++..+..+..+.+
T Consensus 168 el~~il~~s~~~~lv~~~~~~~~l~~ 193 (746)
T PTZ00342 168 VIVDILNETKLEWLCLDLDLVEGLLE 193 (746)
T ss_pred HHHHHHhcCCCCEEEEcHHHHHHHHH
Confidence 99999999999999887777766654
No 331
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=22.55 E-value=5.9e+02 Score=23.49 Aligned_cols=55 Identities=7% Similarity=0.136 Sum_probs=44.0
Q ss_pred CCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 93 GDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 93 gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
.+.| +....+-.-..+.++|...|..++.+-|...++.-...++..+++++.+..
T Consensus 56 ~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 110 (306)
T PF00291_consen 56 GRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPG 110 (306)
T ss_dssp TSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESS
T ss_pred ccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEccc
Confidence 4456 666666677777888888899888888887777888899999999998764
No 332
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=22.33 E-value=3.5e+02 Score=21.09 Aligned_cols=42 Identities=10% Similarity=0.116 Sum_probs=34.6
Q ss_pred HHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 107 VCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 107 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
..+...+-..|.-++.+.+..+.+++.....+.+|++|+.+.
T Consensus 17 ~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 17 KVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 334444566788999999999999999999999999999864
No 333
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.32 E-value=2.9e+02 Score=25.63 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=53.0
Q ss_pred hhcCCCccccEEEEeh-hhHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchH---
Q psy8225 57 IREVPMTGAYKYTVTF-QVEDHSNRIANFFKSK--GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQH--- 130 (479)
Q Consensus 57 ~~~~p~~~a~~~~~Ty-~l~~~~~~la~~L~~~--gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~--- 130 (479)
.+..|+.-+... =.+ ++.++.+.+-+.+++. .+....+..+...+...++.--+++-..+..-.-=...-+++
T Consensus 138 ~~~dP~~~~~y~-~N~~~~~~~L~~l~~~~~~~l~~~~~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~ 216 (287)
T cd01137 138 SEADPANAETYQ-KNAAAYKAKLKALDEWAKAKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVA 216 (287)
T ss_pred HHHCcccHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccCEEEEecccHHHHHHHcCCeEeecccCCCCCCCCHHHHH
Confidence 344554433222 233 3444444444444332 233335678888888888887777766653221112223444
Q ss_pred HHHHHHHhccceEEEeChhhHHH
Q psy8225 131 ILIHSIKVAECKAIIYGAELSEA 153 (479)
Q Consensus 131 ~l~~~l~~~~~~~vi~~~~~~~~ 153 (479)
++...++..++++||++......
T Consensus 217 ~l~~~ik~~~v~~if~e~~~~~~ 239 (287)
T cd01137 217 TLIEQVKKEKVPAVFVESTVNDR 239 (287)
T ss_pred HHHHHHHHhCCCEEEEeCCCChH
Confidence 45556788899999998765443
No 334
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=22.30 E-value=5.9e+02 Score=23.07 Aligned_cols=70 Identities=16% Similarity=0.221 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHhhhc------C--ceeeeecCCc---chHHHHHHHHhccceEE
Q psy8225 77 HSNRIANFFKSKG-LQRGDAVALFMEGQPEYVCMWLGLSKI------G--VVAAFINTNQ---RQHILIHSIKVAECKAI 144 (479)
Q Consensus 77 ~~~~la~~L~~~g-i~~gd~V~i~~~n~~e~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l~~~~~~~v 144 (479)
..+++.+.+.+.+ +.+|++|++...-+.|.++.+..+... + ..++-++... ..+.+..+.+..+..+.
T Consensus 12 ~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 12 LRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3455666777754 678999999999999998877666442 2 3444455433 23334555555555555
Q ss_pred Ee
Q psy8225 145 IY 146 (479)
Q Consensus 145 i~ 146 (479)
+.
T Consensus 92 v~ 93 (258)
T PRK10696 92 IE 93 (258)
T ss_pred EE
Confidence 44
No 335
>PLN02409 serine--glyoxylate aminotransaminase
Probab=22.28 E-value=5.4e+02 Score=25.14 Aligned_cols=57 Identities=19% Similarity=0.222 Sum_probs=31.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC----cchHHHHHHHHh---ccceEEEeC
Q psy8225 90 LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN----QRQHILIHSIKV---AECKAIIYG 147 (479)
Q Consensus 90 i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~---~~~~~vi~~ 147 (479)
+++||.|.+..+...- ....-.+-+.|+.++.+... ...+++...++. .++++|++.
T Consensus 81 ~~~Gd~Vlv~~~~~~~-~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~ 144 (401)
T PLN02409 81 LSPGDKVVSFRIGQFS-LLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVV 144 (401)
T ss_pred CCCCCEEEEeCCCchh-HHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEE
Confidence 5788887776643322 21223344567666555332 356677777765 256666654
No 336
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=22.08 E-value=2.2e+02 Score=24.32 Aligned_cols=43 Identities=21% Similarity=0.172 Sum_probs=31.0
Q ss_pred Eeh-hhHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q psy8225 70 VTF-QVEDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGL 113 (479)
Q Consensus 70 ~Ty-~l~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~ 113 (479)
+|| |+.+.+.++|..+.+. +...+.+.+...++-..++..+|-
T Consensus 17 ~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 17 VSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred ecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 899 9999999999999886 222234556666666666666653
No 337
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=22.00 E-value=6e+02 Score=25.20 Aligned_cols=56 Identities=21% Similarity=0.208 Sum_probs=29.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHH----HHHHhccceEEEeCh
Q psy8225 92 RGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILI----HSIKVAECKAIIYGA 148 (479)
Q Consensus 92 ~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~----~~l~~~~~~~vi~~~ 148 (479)
.|.+|+|.++...-+-++-+-. .+|+.++.+......++.. ..++....+.++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~L~-elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRFVL-ENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHHHH-HCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 4667888776543333333333 5787766555444433333 334444555655554
No 338
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=21.96 E-value=5.3e+02 Score=25.47 Aligned_cols=77 Identities=14% Similarity=-0.033 Sum_probs=56.1
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|+..+...+..+.. ..++.+++++....+-...+ ...+++++..|+..+... ....+.+...+++.++..+.
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i 105 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPET--LLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFAL 105 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH--HHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEE
Confidence 5788888776665554 34688899998887765543 455678888899888765 45677777888888888877
Q ss_pred Eeh
Q psy8225 303 YIG 305 (479)
Q Consensus 303 ~~p 305 (479)
...
T Consensus 106 ~~~ 108 (458)
T PRK09029 106 VLE 108 (458)
T ss_pred EcC
Confidence 544
No 339
>KOG1175|consensus
Probab=21.96 E-value=7.5e+02 Score=26.02 Aligned_cols=98 Identities=13% Similarity=0.075 Sum_probs=66.3
Q ss_pred CCCCcEEEEEccCCCCCcceEEeehHHHHHHhhhhh---hhcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEec-
Q psy8225 206 KPSDKLAYIYTSGTTGLPKAAVMTHVRAMFMAISGR---YQTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIR- 281 (479)
Q Consensus 206 ~~~~~~~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~- 281 (479)
..+.++.+.-.-++.+.+ + ++...++.....++ ...+++++|++...+|+.-.. ....+++...|+.....
T Consensus 78 ~~~~~a~~~~~~~~~~~~--~-~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~--~ia~lA~~r~Gai~~~v~ 152 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTE--V-WTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEA--VIAMLACARIGAIHSSVF 152 (626)
T ss_pred CCCCcEEEEEecCCCceE--E-EEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHH--HHHHHHHhhcCeEEEEee
Confidence 344555554444444443 3 66666655443332 366899999999999987654 34556677777766654
Q ss_pred CCCChhHHHHHHHHhcccEEEEehHHH
Q psy8225 282 SKFSASNFWKDCIKYNCTVAQYIGEMC 308 (479)
Q Consensus 282 ~~~~~~~~~~~i~~~~~t~~~~~p~~l 308 (479)
..|.+..+...++..++..+.+.-...
T Consensus 153 ~~fs~~~l~~Rl~~~~~k~i~t~d~~~ 179 (626)
T KOG1175|consen 153 AGFSAKELLDRLQDSKAKVIITQDVVA 179 (626)
T ss_pred ccCCHHHHHHHHHhcCCCEEEEEeeec
Confidence 378999999999999999988766544
No 340
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=21.92 E-value=7.7e+02 Score=24.25 Aligned_cols=65 Identities=12% Similarity=0.002 Sum_probs=39.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHH-HHHHHHhccceEEEeChhhHHHHHHh
Q psy8225 92 RGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHI-LIHSIKVAECKAIIYGAELSEALTEV 157 (479)
Q Consensus 92 ~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~-l~~~l~~~~~~~vi~~~~~~~~~~~~ 157 (479)
.|.+|+|+......+-++-+-. .+|+.++.+......++ ....++.......+.+......+.+.
T Consensus 273 ~Gkrv~i~gd~~~~~~l~~~L~-elGm~~v~~~t~~~~~~~~~~~~~~l~~~~~v~~~~d~~~l~~~ 338 (407)
T TIGR01279 273 RGKKIFFFGDNLLELPLARFLK-RCGMEVVECGTPYIHRRFHAAELALLEGGVRIVEQPDFHRQLQR 338 (407)
T ss_pred CCCEEEEECCchHHHHHHHHHH-HCCCEEEEecCCCCChHHHHHHHhhcCCCCeEEeCCCHHHHHHH
Confidence 5889999998766555444444 38998888866655443 35566666555545444333333333
No 341
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=21.88 E-value=3.5e+02 Score=25.02 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=35.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC----------cchHHHHHHHHh-ccceEEEeC
Q psy8225 90 LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN----------QRQHILIHSIKV-AECKAIIYG 147 (479)
Q Consensus 90 i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~----------~~~~~l~~~l~~-~~~~~vi~~ 147 (479)
+++||.|.+.-+. +....-++...|+.++.+.+. .+.+++...++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~---h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNC---HKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCc---hHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5789988776443 233345566788877777543 467788888764 467766654
No 342
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=21.87 E-value=8.1e+02 Score=24.54 Aligned_cols=50 Identities=22% Similarity=0.157 Sum_probs=32.8
Q ss_pred HHHcCCCCCCEEEEEcCCchHHHHHHHH-hhhcCceeeee--c------------CCcchHHHHHHHHhc
Q psy8225 85 FKSKGLQRGDAVALFMEGQPEYVCMWLG-LSKIGVVAAFI--N------------TNQRQHILIHSIKVA 139 (479)
Q Consensus 85 L~~~gi~~gd~V~i~~~n~~e~~~~~lA-~~~~G~~~v~l--~------------~~~~~~~l~~~l~~~ 139 (479)
+...++++||.| ++ ..++.+.-+ +...|++++=+ + -.++.+.+...++..
T Consensus 102 l~~l~l~pGDeV----ps-n~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 102 LSQIAIKPGDYV----PG-NMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred HHHhCCCCcCEE----CC-ceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccc
Confidence 345589999976 33 455555555 67788866655 2 124678888888754
No 343
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=21.83 E-value=3.3e+02 Score=19.90 Aligned_cols=66 Identities=12% Similarity=0.038 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccce
Q psy8225 75 EDHSNRIANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECK 142 (479)
Q Consensus 75 ~~~~~~la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 142 (479)
++-+..++..+...+ +....+.+-..+-++.+.+.--+.+.++.++.++ ..-++.....|+..+.+
T Consensus 9 yeTs~~va~~~~~~~-~~~~v~ia~g~~~~Dalsa~~~a~~~~~PIll~~-~~l~~~~~~~l~~~~~~ 74 (92)
T PF04122_consen 9 YETSAKVAKKFYPDN-KSDKVYIASGDNFADALSASPLAAKNNAPILLVN-NSLPSSVKAFLKSLNIK 74 (92)
T ss_pred HHHHHHHHHHhcccC-CCCEEEEEeCcchhhhhhhHHHHHhcCCeEEEEC-CCCCHHHHHHHHHcCCC
Confidence 344556666654432 3333444444444555444444445577777777 44446666666665433
No 344
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.75 E-value=3.3e+02 Score=25.05 Aligned_cols=97 Identities=14% Similarity=0.129 Sum_probs=55.3
Q ss_pred HHHhhcCCCccccEEEEeh-hhHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCC--cc
Q psy8225 54 VRTIREVPMTGAYKYTVTF-QVEDHSNRIANFFKSK--GLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTN--QR 128 (479)
Q Consensus 54 ~~~~~~~p~~~a~~~~~Ty-~l~~~~~~la~~L~~~--gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~--~~ 128 (479)
+...+..|+.-.... =.+ .+.++.+.+-..+++. .+...++..+...+...++.-.+++-..+..- +.+. -+
T Consensus 119 ~~L~~~dP~~~~~y~-~N~~~~~~~L~~l~~~~~~~l~~~~~~~~~~~t~H~af~Y~~~~ygl~~~~~~~--~~~~~eps 195 (276)
T cd01016 119 EVLSEKLPEHKDEFQ-ANSEAYVEELDSLDAYAKKKIAEIPEQQRVLVTAHDAFGYFGRAYGFEVKGLQG--ISTDSEAG 195 (276)
T ss_pred HHHHHHCcccHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCchhcCeEEEecCcHHHHHHHcCCeEecCcC--CCcccCCC
Confidence 334445565543322 233 3444444444444332 12334578888888988888888877766322 2222 23
Q ss_pred hH---HHHHHHHhccceEEEeChhhHHH
Q psy8225 129 QH---ILIHSIKVAECKAIIYGAELSEA 153 (479)
Q Consensus 129 ~~---~l~~~l~~~~~~~vi~~~~~~~~ 153 (479)
++ ++...++..++++||++....+.
T Consensus 196 ~~~l~~l~~~ik~~~v~~if~e~~~~~~ 223 (276)
T cd01016 196 LRDINELVDLIVERKIKAIFVESSVNQK 223 (276)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCHH
Confidence 44 45667788889999998765443
No 345
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=21.58 E-value=4.2e+02 Score=25.76 Aligned_cols=56 Identities=9% Similarity=-0.041 Sum_probs=43.8
Q ss_pred EEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhh
Q psy8225 95 AVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAEL 150 (479)
Q Consensus 95 ~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 150 (479)
+-.+....+-.-..+.++|...|..++.+-|...+.+-...++..++++++++...
T Consensus 95 ~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~ 150 (376)
T TIGR01747 95 ATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNY 150 (376)
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCH
Confidence 34455555556677778888999988888887777788888999999999998643
No 346
>PRK02991 D-serine dehydratase; Provisional
Probab=21.48 E-value=4.7e+02 Score=26.15 Aligned_cols=55 Identities=4% Similarity=0.004 Sum_probs=44.0
Q ss_pred EEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChhhH
Q psy8225 97 ALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAELS 151 (479)
Q Consensus 97 ~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 151 (479)
.+....+-.-..+.+++...|..++.+-|...++.-...++..++++++++....
T Consensus 160 VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~ 214 (441)
T PRK02991 160 IAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYG 214 (441)
T ss_pred EEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHH
Confidence 3444555566777788999999998888888888888999999999999986543
No 347
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=21.06 E-value=3.9e+02 Score=20.54 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=32.3
Q ss_pred HHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeCh
Q psy8225 110 WLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGA 148 (479)
Q Consensus 110 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 148 (479)
...+-..|.-++-+.+..+.+++...+.+.++++|..+.
T Consensus 20 ~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 20 ARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 334445788888888999999999999999999998764
No 348
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=20.96 E-value=4.9e+02 Score=25.99 Aligned_cols=77 Identities=6% Similarity=-0.188 Sum_probs=54.9
Q ss_pred EeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecC-CCChhHHHHHHHHhcccEEE
Q psy8225 227 VMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRS-KFSASNFWKDCIKYNCTVAQ 302 (479)
Q Consensus 227 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 302 (479)
.+|...+...+..+.. ..+..+++++....+-... +...+++++..|+..+..+ ......+...++..++..++
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~--~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE--MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLII 104 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEE
Confidence 4788888776655543 3467788998887775443 3466778888999888665 45667778888888888877
Q ss_pred Eeh
Q psy8225 303 YIG 305 (479)
Q Consensus 303 ~~p 305 (479)
...
T Consensus 105 ~~~ 107 (503)
T PRK04813 105 ATE 107 (503)
T ss_pred ecc
Confidence 653
No 349
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=20.94 E-value=6e+02 Score=23.12 Aligned_cols=60 Identities=10% Similarity=0.007 Sum_probs=38.2
Q ss_pred HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCce-eeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 84 FFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVV-AAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 84 ~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~-~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
.+.+.+..+|++|+|+..-.+-..++.+|- ..|+. ++.++. +.+ -..+++..+++.++..
T Consensus 112 al~~~~~~~g~~VlV~G~G~vG~~~~~~ak-~~G~~~Vi~~~~--~~~-r~~~a~~~Ga~~~i~~ 172 (280)
T TIGR03366 112 ALEAAGDLKGRRVLVVGAGMLGLTAAAAAA-AAGAARVVAADP--SPD-RRELALSFGATALAEP 172 (280)
T ss_pred HHHhccCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHH-HHHHHHHcCCcEecCc
Confidence 345556779999999987666666666665 45765 444432 233 3355677777776653
No 350
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=20.87 E-value=4.3e+02 Score=27.55 Aligned_cols=77 Identities=10% Similarity=-0.079 Sum_probs=56.4
Q ss_pred EEeehHHHHHHhhhhhh---hcCCCCCCeEEEeccchhhhhhHHHHHHHHhcCceEEecCC-CC-----hhHHHHHHHHh
Q psy8225 226 AVMTHVRAMFMAISGRY---QTGLTSDDVVYTTLPLYHTAGGLLGIGQCLLGGSTVVIRSK-FS-----ASNFWKDCIKY 296 (479)
Q Consensus 226 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~-~~-----~~~~~~~i~~~ 296 (479)
..+|...+...+..+.. ..+++++|++...++-+.-+ +..+++++..|+.++..+. +. ..++...+++.
T Consensus 68 ~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~ 145 (614)
T PRK08180 68 RRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEH--ALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELL 145 (614)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH--HHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcC
Confidence 46788888776665554 45788999998888766543 4667788899999887653 33 56777888888
Q ss_pred cccEEEEe
Q psy8225 297 NCTVAQYI 304 (479)
Q Consensus 297 ~~t~~~~~ 304 (479)
++..++..
T Consensus 146 ~~~~li~~ 153 (614)
T PRK08180 146 TPGLVFAD 153 (614)
T ss_pred CCcEEEEc
Confidence 88887765
No 351
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=20.79 E-value=2.5e+02 Score=21.63 Aligned_cols=42 Identities=21% Similarity=0.359 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCC-chHHHHHHHHhhhcCce
Q psy8225 78 SNRIANFFKSKGLQRGDAVALFMEG-QPEYVCMWLGLSKIGVV 119 (479)
Q Consensus 78 ~~~la~~L~~~gi~~gd~V~i~~~n-~~e~~~~~lA~~~~G~~ 119 (479)
.+.+.+.+.+.|+.+++.|.+++.. +.....+.+.+...|..
T Consensus 64 ~~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 64 PEEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 3455666777788889999999988 46666667777777864
No 352
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=20.76 E-value=4.7e+02 Score=21.28 Aligned_cols=95 Identities=17% Similarity=0.227 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCEEEEE-cCCchHH-HHHHHHhhhcCceeeeecCCc-------chHHHHHHHHhccc
Q psy8225 74 VEDHSNRIANFFKSK---GLQRGDAVALF-MEGQPEY-VCMWLGLSKIGVVAAFINTNQ-------RQHILIHSIKVAEC 141 (479)
Q Consensus 74 l~~~~~~la~~L~~~---gi~~gd~V~i~-~~n~~e~-~~~~lA~~~~G~~~v~l~~~~-------~~~~l~~~l~~~~~ 141 (479)
+.+++..+-....+. ..-+|..|+++ ..++... .....|+.++|+.++.+++.. +.++....|... +
T Consensus 17 ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~-~ 95 (142)
T PF02729_consen 17 LLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY-V 95 (142)
T ss_dssp HHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-C
T ss_pred HHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-h
Confidence 334444444444332 23456666554 4455544 555678999999999998543 456778888888 8
Q ss_pred eEEEeChhhHHHHHHhhccCCcceEEecC
Q psy8225 142 KAIIYGAELSEALTEVKDSIPGISLYAAG 170 (479)
Q Consensus 142 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (479)
++|++-......+.+..+.. .+.++..+
T Consensus 96 D~iv~R~~~~~~~~~~a~~~-~vPVINa~ 123 (142)
T PF02729_consen 96 DAIVIRHPSHGALEELAEHS-SVPVINAG 123 (142)
T ss_dssp SEEEEEESSHHHHHHHHHHC-SSEEEEEE
T ss_pred heEEEEeccchHHHHHHHhc-cCCeEcCc
Confidence 88887554444555544333 44454433
No 353
>PF04915 DltD_N: DltD N-terminal region; InterPro: IPR006999 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the N-terminal region of DltD.; PDB: 3BMA_C.
Probab=20.71 E-value=74 Score=21.66 Aligned_cols=16 Identities=25% Similarity=0.455 Sum_probs=11.0
Q ss_pred hCcceeeeeccccccC
Q psy8225 345 FGLDRICEFYGATEGN 360 (479)
Q Consensus 345 ~~~~~v~~~YG~tE~~ 360 (479)
+.....+..||++|-.
T Consensus 25 l~~~~yvPfyGSSEl~ 40 (62)
T PF04915_consen 25 LKDPKYVPFYGSSELS 40 (62)
T ss_dssp HSSS-EEEEE-SSTTT
T ss_pred hcCCCeeeecCcHHHh
Confidence 4444899999999975
No 354
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=20.62 E-value=2e+02 Score=19.56 Aligned_cols=22 Identities=18% Similarity=0.099 Sum_probs=19.9
Q ss_pred CcEEEcCCeeEEecCCcEEEec
Q psy8225 452 DAAFNTGDILIKDKFQYFYFKD 473 (479)
Q Consensus 452 ~g~~~TGD~g~~d~dG~l~~~G 473 (479)
|-|+..||.-.+...+.+++.+
T Consensus 37 D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 37 DYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred CEEECCCCEEEeCCCCEEEEEe
Confidence 7799999999999999998876
No 355
>PRK05939 hypothetical protein; Provisional
Probab=20.46 E-value=3.9e+02 Score=26.21 Aligned_cols=64 Identities=16% Similarity=0.205 Sum_probs=36.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 81 IANFFKSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 81 la~~L~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
+...|... +++||.|.+.-+.-......+-++.+.|+.+..++.. ..+++...++ -+.++|+++
T Consensus 75 i~~~l~al-l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~-~~tklV~ve 138 (397)
T PRK05939 75 IAAVFLTL-LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIR-PNTRMVFVE 138 (397)
T ss_pred HHHHHHHH-cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCC-CCCeEEEEE
Confidence 33344443 6789988775432222222233455678887777653 4566776664 357777764
No 356
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=20.35 E-value=6.9e+02 Score=23.33 Aligned_cols=59 Identities=14% Similarity=0.168 Sum_probs=39.6
Q ss_pred HHcCCCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeC
Q psy8225 86 KSKGLQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYG 147 (479)
Q Consensus 86 ~~~gi~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 147 (479)
...++++|++|.|......-.+++.+|....|+.++.+... . +-...++..+++.++..
T Consensus 156 ~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~--~-~~~~~~~~~g~~~v~~~ 214 (338)
T PRK09422 156 KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDIN--D-DKLALAKEVGADLTINS 214 (338)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC--h-HHHHHHHHcCCcEEecc
Confidence 34578999999999876677777777776568766655432 2 33444466777777654
No 357
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=20.33 E-value=7.3e+02 Score=23.37 Aligned_cols=51 Identities=12% Similarity=0.040 Sum_probs=41.0
Q ss_pred EcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEeChh
Q psy8225 99 FMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIYGAE 149 (479)
Q Consensus 99 ~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 149 (479)
....+-.-..+.++|.+.|..++.+-|...++.....++..++++++++..
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (317)
T TIGR02991 72 AASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRS 122 (317)
T ss_pred EECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 334455567777888899999888888877778888999999999999864
No 358
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=20.10 E-value=4.7e+02 Score=25.47 Aligned_cols=56 Identities=13% Similarity=0.092 Sum_probs=28.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHhhhcCceeeeecCCcchHHHHHHHHhccceEEEe
Q psy8225 90 LQRGDAVALFMEGQPEYVCMWLGLSKIGVVAAFINTNQRQHILIHSIKVAECKAIIY 146 (479)
Q Consensus 90 i~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 146 (479)
+++||.|.+..+.-...+..+-.....+.+.+.+.+....+++...++. ++++|++
T Consensus 87 l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l 142 (382)
T TIGR02080 87 LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLI 142 (382)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEE
Confidence 5678887665554433333332333344333333333455666666543 4666665
Done!