BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8228
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91VE0|S27A4_MOUSE Long-chain fatty acid transport protein 4 OS=Mus musculus
GN=Slc27a4 PE=1 SV=1
Length = 643
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSA 33
W+GENV+T+EVE LS+++ + D AVYGVE
Sbjct: 511 WKGENVSTTEVEGTLSRLLHMADVAVYGVEVPG 543
>sp|Q5RDY4|S27A4_PONAB Long-chain fatty acid transport protein 4 OS=Pongo abelii
GN=SLC27A4 PE=2 SV=1
Length = 643
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSA 33
W+GENV+T+EVE LS+++ + D AVYGVE
Sbjct: 511 WKGENVSTTEVEGTLSRLLDMADVAVYGVEVPG 543
>sp|Q6P1M0|S27A4_HUMAN Long-chain fatty acid transport protein 4 OS=Homo sapiens
GN=SLC27A4 PE=1 SV=1
Length = 643
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSA 33
W+GENV+T+EVE LS+++ + D AVYGVE
Sbjct: 511 WKGENVSTTEVEGTLSRLLDMADVAVYGVEVPG 543
>sp|Q4R3Y4|S27A4_MACFA Long-chain fatty acid transport protein 4 OS=Macaca fascicularis
GN=SLC27A4 PE=2 SV=1
Length = 643
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSA 33
W+GENV+T+EVE LS+++ + D AVYGVE
Sbjct: 511 WKGENVSTTEVEGTLSRLLDMADVAVYGVEVPG 543
>sp|Q6PCB7|S27A1_HUMAN Long-chain fatty acid transport protein 1 OS=Homo sapiens
GN=SLC27A1 PE=2 SV=1
Length = 646
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29
WRGENV+T+EVE LS+++ D AVYGV
Sbjct: 514 WRGENVSTTEVEGVLSRLLGQTDVAVYGV 542
>sp|Q3ZKN0|S27A1_BOVIN Long-chain fatty acid transport protein 1 OS=Bos taurus GN=SLC27A1
PE=2 SV=1
Length = 646
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29
WRGENV+T+EVE LS+++ D AVYGV
Sbjct: 514 WRGENVSTTEVEGVLSRLLGQTDVAVYGV 542
>sp|P97849|S27A1_RAT Long-chain fatty acid transport protein 1 OS=Rattus norvegicus
GN=Slc27a1 PE=2 SV=1
Length = 646
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29
WRGENV+T+EVE LS+++ D AVYGV
Sbjct: 514 WRGENVSTTEVEAVLSRLLGQTDVAVYGV 542
>sp|Q60714|S27A1_MOUSE Long-chain fatty acid transport protein 1 OS=Mus musculus
GN=Slc27a1 PE=1 SV=1
Length = 646
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29
WRGENV+T+EVE LS+++ D AVYGV
Sbjct: 514 WRGENVSTTEVEAVLSRLLGQTDVAVYGV 542
>sp|Q9Y2P5|S27A5_HUMAN Bile acyl-CoA synthetase OS=Homo sapiens GN=SLC27A5 PE=1 SV=1
Length = 690
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVLKKIKLF--QVFTSMKRQQCI 58
W+GENV+T EVE LS++ L+ VYGV + ++L Q F K Q +
Sbjct: 557 WKGENVSTHEVEGVLSQVDFLQQVNVYGVCVPGCEGKVGMAAVQLAPGQTFDGEKLYQHV 616
Query: 59 RAFL 62
RA+L
Sbjct: 617 RAWL 620
>sp|Q4LDG0|S27A5_MOUSE Bile acyl-CoA synthetase OS=Mus musculus GN=Slc27a5 PE=2 SV=2
Length = 689
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVLKKIKLF--QVFTSMKRQQCI 58
W+GENV+T EVE LS + L++ VYGV + +KL + F K Q +
Sbjct: 556 WKGENVSTGEVECVLSSLDFLEEVNVYGVPVPGCEGKVGMAAVKLAPGKTFDGQKLYQHV 615
Query: 59 RAFL 62
R++L
Sbjct: 616 RSWL 619
>sp|Q9ES38|S27A5_RAT Bile acyl-CoA synthetase OS=Rattus norvegicus GN=Slc27a5 PE=1 SV=1
Length = 690
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVLKKIKLF--QVFTSMKRQQCI 58
W+GENV+T EVE LS + L++ VYGV + +KL + F K Q +
Sbjct: 557 WKGENVSTREVEGVLSILDFLEEVNVYGVTVPGCEGKVGMAAVKLAPGKTFDGQKLYQHV 616
Query: 59 RAFL 62
R++L
Sbjct: 617 RSWL 620
>sp|Q9Y2P4|S27A6_HUMAN Long-chain fatty acid transport protein 6 OS=Homo sapiens
GN=SLC27A6 PE=1 SV=1
Length = 619
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSA 33
W+GENVAT+EV D + + +++A VYGV S
Sbjct: 486 WKGENVATTEVADVIGMLDFIQEANVYGVAISG 518
>sp|P15101|DOPO_BOVIN Dopamine beta-hydroxylase OS=Bos taurus GN=DBH PE=1 SV=2
Length = 610
Score = 36.2 bits (82), Expect = 0.082, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 96 KHDEQTMSFQECILKRSGFNENAFYFPEEPGILIGMIKES---RAESHFNGPFIVT 148
K Q ++F +L AFY+PEE G+ G S R E H++ P ++T
Sbjct: 279 KMKPQRLNFCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSRFLRLEVHYHNPLVIT 334
>sp|O88561|S27A3_MOUSE Long-chain fatty acid transport protein 3 OS=Mus musculus
GN=Slc27a3 PE=1 SV=2
Length = 667
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29
W+GENVAT+EV + L + L++ +YGV
Sbjct: 534 WKGENVATTEVAEVLETLDFLQEVNIYGV 562
>sp|Q8J0E9|CEFD1_ACRCH Isopenicillin N epimerase component 1 OS=Acremonium chrysogenum
GN=cefD1 PE=3 SV=1
Length = 609
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVE 30
W+GENV+T+EV L + +A VYGV+
Sbjct: 460 WKGENVSTTEVGQVLGSHADIAEANVYGVQ 489
>sp|Q5K4L6|S27A3_HUMAN Long-chain fatty acid transport protein 3 OS=Homo sapiens
GN=SLC27A3 PE=2 SV=3
Length = 730
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29
W+GENVAT+EV + + L++ VYGV
Sbjct: 597 WKGENVATTEVAEVFEALDFLQEVNVYGV 625
>sp|O14975|S27A2_HUMAN Very long-chain acyl-CoA synthetase OS=Homo sapiens GN=SLC27A2 PE=1
SV=2
Length = 620
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGVE 30
W+GENVAT+EV D + + +++ VYGV
Sbjct: 487 WKGENVATTEVADTVGLVDFVQEVNVYGVH 516
>sp|P97524|S27A2_RAT Very long-chain acyl-CoA synthetase OS=Rattus norvegicus GN=Slc27a2
PE=1 SV=1
Length = 620
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29
W+GENVAT+EV D + + +++ VYGV
Sbjct: 487 WKGENVATTEVADIVGLVDFVEEVNVYGV 515
>sp|Q838K1|MENE_ENTFA 2-succinylbenzoate--CoA ligase OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=menE PE=3 SV=1
Length = 485
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Query: 3 GENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVLKKIKLFQVFTSMKRQQCIRAFL 62
GEN+ +EVE L I +K AAV G + + V I ++ + + QC R
Sbjct: 388 GENIYPTEVEQVLQAITGIKAAAVVGEPDAQWGAVPVAYVISDQEITLAQIQDQCSRKLA 447
Query: 63 TYKFIMAIWLWKNWTLVDVFKTQVAKH 89
YK I+ ++ ++AKH
Sbjct: 448 KYKRPKRIYFCHSFP--QTASGKIAKH 472
>sp|O35488|S27A2_MOUSE Very long-chain acyl-CoA synthetase OS=Mus musculus GN=Slc27a2 PE=1
SV=2
Length = 620
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29
W+GENVAT+EV D + + +++ VYGV
Sbjct: 487 WKGENVATTEVADIVGLVDFVEEVNVYGV 515
>sp|O42633|FAT1_COCHE Fatty acid transporter protein OS=Cochliobolus heterostrophus
GN=FAT1 PE=3 SV=1
Length = 643
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29
W+ ENV+T+EV D + Q+ + VYGV
Sbjct: 506 WKSENVSTNEVADVMGTFPQIAETNVYGV 534
>sp|P06781|RHO2_YEAST GTP-binding protein RHO2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RHO2 PE=1 SV=2
Length = 192
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 103 SFQECILKRSGFNENAF-YFPEEPGILIGMIKESRAESHF 141
+F+ I R+ + + A Y P+ P +L+G+ K+ R E+HF
Sbjct: 90 NFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHF 129
>sp|P09172|DOPO_HUMAN Dopamine beta-hydroxylase OS=Homo sapiens GN=DBH PE=1 SV=3
Length = 617
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 102 MSFQECILKRSGFNENAFYFPEEPGILIGMIKES---RAESHFNGPFIV 147
+++ +L AFY+PEE G+ G S R E H++ P ++
Sbjct: 292 LNYCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSRYLRLEVHYHNPLVI 340
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,568,002
Number of Sequences: 539616
Number of extensions: 1812746
Number of successful extensions: 4199
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4171
Number of HSP's gapped (non-prelim): 31
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)