Query psy8228
Match_columns 149
No_of_seqs 282 out of 1981
Neff 5.8
Searched_HMMs 46136
Date Fri Aug 16 21:57:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8228.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8228hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1179|consensus 99.9 4.4E-24 9.4E-29 191.2 6.0 117 1-142 516-645 (649)
2 PRK07868 acyl-CoA synthetase; 99.8 1.1E-20 2.4E-25 178.4 13.0 112 2-140 865-986 (994)
3 PRK08279 long-chain-acyl-CoA s 99.8 1.4E-20 3E-25 166.2 11.7 115 1-140 467-594 (600)
4 KOG1176|consensus 99.8 9.9E-21 2.2E-25 170.0 8.1 87 1-112 436-529 (537)
5 KOG1177|consensus 99.8 5.7E-19 1.2E-23 156.5 8.1 79 2-85 490-577 (596)
6 COG0318 CaiC Acyl-CoA syntheta 99.8 8.1E-19 1.8E-23 155.0 8.6 90 1-115 429-527 (534)
7 PRK13388 acyl-CoA synthetase; 99.8 8.6E-18 1.9E-22 147.2 12.6 116 2-140 409-534 (540)
8 PRK09188 serine/threonine prot 99.7 1.2E-17 2.7E-22 143.9 10.1 83 4-113 239-326 (365)
9 PRK07867 acyl-CoA synthetase; 99.7 7.1E-17 1.5E-21 141.3 11.3 109 2-139 410-526 (529)
10 PLN03051 acyl-activating enzym 99.7 4.7E-17 1E-21 141.3 8.6 83 2-85 386-481 (499)
11 PRK07445 O-succinylbenzoic aci 99.7 1.1E-16 2.4E-21 138.4 9.5 80 1-85 352-437 (452)
12 TIGR01217 ac_ac_CoA_syn acetoa 99.7 1.5E-16 3.3E-21 143.3 9.9 86 2-112 528-623 (652)
13 COG0365 Acs Acyl-coenzyme A sy 99.7 2E-16 4.3E-21 142.1 7.9 87 2-113 425-520 (528)
14 PRK07824 O-succinylbenzoic aci 99.7 4.6E-16 9.9E-21 129.0 9.4 80 1-85 261-347 (358)
15 PTZ00237 acetyl-CoA synthetase 99.7 3.6E-16 7.8E-21 141.0 9.3 86 2-112 521-620 (647)
16 PF13193 AMP-binding_C: AMP-bi 99.6 3.3E-16 7.1E-21 105.2 6.1 69 10-83 1-73 (73)
17 PRK03584 acetoacetyl-CoA synth 99.6 7.4E-16 1.6E-20 138.1 10.1 87 1-112 526-622 (655)
18 PLN02654 acetate-CoA ligase 99.6 8.3E-16 1.8E-20 139.1 10.1 88 1-113 541-638 (666)
19 COG1021 EntE Peptide arylation 99.6 2E-16 4.4E-21 138.3 4.7 80 2-85 443-528 (542)
20 PRK07788 acyl-CoA synthetase; 99.6 8.2E-16 1.8E-20 134.1 8.5 79 2-85 456-541 (549)
21 TIGR02316 propion_prpE propion 99.6 1.4E-15 2.9E-20 136.0 9.3 87 1-112 500-601 (628)
22 PRK08043 bifunctional acyl-[ac 99.6 1.9E-15 4.1E-20 137.3 9.3 88 1-113 619-711 (718)
23 PLN02574 4-coumarate--CoA liga 99.6 2.3E-15 4.9E-20 132.3 8.8 88 1-113 458-552 (560)
24 PRK06155 crotonobetaine/carnit 99.6 3.9E-15 8.4E-20 130.6 10.2 91 2-117 429-526 (542)
25 TIGR02188 Ac_CoA_lig_AcsA acet 99.6 5.2E-15 1.1E-19 131.6 10.1 86 2-112 504-599 (625)
26 PRK00174 acetyl-CoA synthetase 99.6 5.2E-15 1.1E-19 132.0 10.0 87 1-112 511-607 (637)
27 PRK05677 long-chain-fatty-acid 99.6 2.7E-15 5.9E-20 131.6 7.9 80 1-85 461-547 (562)
28 PRK09029 O-succinylbenzoic aci 99.6 5E-15 1.1E-19 126.3 9.0 80 1-85 359-443 (458)
29 PRK07529 AMP-binding domain pr 99.6 4.9E-15 1.1E-19 132.9 9.3 105 1-117 473-585 (632)
30 PRK08314 long-chain-fatty-acid 99.6 4.7E-15 1E-19 128.6 8.7 89 1-114 444-541 (546)
31 TIGR03098 ligase_PEP_1 acyl-Co 99.6 6E-15 1.3E-19 126.4 9.1 80 1-85 422-508 (515)
32 PRK05851 long-chain-fatty-acid 99.6 3E-15 6.4E-20 130.6 7.0 80 1-85 423-512 (525)
33 PLN03102 acyl-activating enzym 99.6 6.5E-15 1.4E-19 130.5 8.9 80 1-85 448-544 (579)
34 PRK07638 acyl-CoA synthetase; 99.6 5.8E-15 1.3E-19 126.6 8.3 80 1-85 389-471 (487)
35 PRK04319 acetyl-CoA synthetase 99.6 6.3E-15 1.4E-19 129.5 8.4 88 1-113 460-557 (570)
36 PRK06839 acyl-CoA synthetase; 99.6 9.7E-15 2.1E-19 124.5 9.1 79 2-85 400-485 (496)
37 PRK13382 acyl-CoA synthetase; 99.6 7.2E-15 1.6E-19 128.5 8.3 80 1-85 444-530 (537)
38 PRK13390 acyl-CoA synthetase; 99.6 6.5E-15 1.4E-19 126.7 7.5 80 1-85 407-496 (501)
39 PRK08308 acyl-CoA synthetase; 99.6 1.2E-14 2.6E-19 122.9 9.0 80 1-85 319-403 (414)
40 KOG1175|consensus 99.6 5.1E-15 1.1E-19 135.0 7.0 89 2-115 504-602 (626)
41 PRK10524 prpE propionyl-CoA sy 99.6 1.3E-14 2.8E-19 129.2 9.3 86 2-112 502-602 (629)
42 PRK05852 acyl-CoA synthetase; 99.6 1.3E-14 2.8E-19 126.2 8.6 79 2-85 437-522 (534)
43 PLN02860 o-succinylbenzoate-Co 99.5 2.1E-14 4.5E-19 126.3 9.8 80 2-85 443-544 (563)
44 PRK05620 long-chain-fatty-acid 99.5 2.8E-14 6.1E-19 125.6 10.5 88 2-114 459-556 (576)
45 PRK07787 acyl-CoA synthetase; 99.5 1.9E-14 4.1E-19 123.4 9.1 87 2-113 380-471 (471)
46 PLN02246 4-coumarate--CoA liga 99.5 2.2E-14 4.8E-19 124.8 8.8 79 2-85 441-526 (537)
47 PLN03052 acetate--CoA ligase; 99.5 1.8E-14 3.9E-19 132.5 8.7 83 2-85 618-711 (728)
48 PRK07798 acyl-CoA synthetase; 99.5 2.4E-14 5.3E-19 122.6 8.9 88 1-113 436-530 (533)
49 PRK08751 putative long-chain f 99.5 2E-14 4.4E-19 125.5 8.5 88 1-113 465-558 (560)
50 PRK06060 acyl-CoA synthetase; 99.5 2.4E-14 5.2E-19 129.5 9.1 80 1-85 393-482 (705)
51 PRK07008 long-chain-fatty-acid 99.5 2.5E-14 5.4E-19 125.0 8.9 79 2-85 438-523 (539)
52 TIGR02275 DHB_AMP_lig 2,3-dihy 99.5 2.6E-14 5.7E-19 124.1 8.7 80 1-85 436-522 (527)
53 PRK06710 long-chain-fatty-acid 99.5 2.7E-14 5.8E-19 125.0 8.3 90 1-115 459-555 (563)
54 PRK06145 acyl-CoA synthetase; 99.5 3.9E-14 8.5E-19 121.3 9.2 80 1-85 401-487 (497)
55 PRK06018 putative acyl-CoA syn 99.5 3.4E-14 7.4E-19 124.0 8.9 88 1-113 438-532 (542)
56 PRK09088 acyl-CoA synthetase; 99.5 4.3E-14 9.2E-19 121.1 9.1 80 1-85 389-475 (488)
57 PRK07470 acyl-CoA synthetase; 99.5 4.2E-14 9.1E-19 122.4 9.0 80 1-85 422-508 (528)
58 PRK12583 acyl-CoA synthetase; 99.5 5.9E-14 1.3E-18 121.9 9.7 80 1-85 456-542 (558)
59 PRK08008 caiC putative crotono 99.5 3.4E-14 7.4E-19 122.5 8.1 79 2-85 427-512 (517)
60 PRK06334 long chain fatty acid 99.5 3.5E-14 7.7E-19 124.8 7.8 78 1-85 438-525 (539)
61 PRK06814 acylglycerophosphoeth 99.5 6E-14 1.3E-18 132.4 9.7 81 1-85 1038-1122(1140)
62 PLN02330 4-coumarate--CoA liga 99.5 8E-14 1.7E-18 121.8 9.3 80 1-85 445-531 (546)
63 PRK13295 cyclohexanecarboxylat 99.5 1.2E-13 2.6E-18 120.7 10.0 81 1-85 447-534 (547)
64 PRK05857 acyl-CoA synthetase; 99.5 5.4E-14 1.2E-18 123.1 7.7 96 1-117 430-533 (540)
65 PRK08315 AMP-binding domain pr 99.5 9.2E-14 2E-18 120.9 9.1 80 1-85 455-541 (559)
66 PRK07769 long-chain-fatty-acid 99.5 4.1E-14 8.9E-19 126.2 7.0 79 2-85 492-604 (631)
67 PRK05605 long-chain-fatty-acid 99.5 1.2E-13 2.7E-18 121.1 9.8 80 1-85 473-559 (573)
68 PRK10946 entE enterobactin syn 99.5 1.1E-13 2.4E-18 120.9 9.3 80 1-85 437-522 (536)
69 TIGR03208 cyc_hxne_CoA_lg cycl 99.5 9.1E-14 2E-18 121.0 8.6 81 1-85 445-532 (538)
70 PRK06188 acyl-CoA synthetase; 99.5 1.3E-13 2.7E-18 119.4 9.4 80 1-85 421-507 (524)
71 PRK13391 acyl-CoA synthetase; 99.5 1.1E-13 2.5E-18 119.5 8.8 90 1-115 410-509 (511)
72 PRK12406 long-chain-fatty-acid 99.5 1.2E-13 2.6E-18 119.1 8.6 89 1-114 407-502 (509)
73 PRK07656 long-chain-fatty-acid 99.5 1.5E-13 3.3E-18 117.4 9.1 80 1-85 420-506 (513)
74 PRK12492 long-chain-fatty-acid 99.5 1.5E-13 3.3E-18 120.6 9.3 80 1-85 469-554 (562)
75 PRK07059 Long-chain-fatty-acid 99.5 1.6E-13 3.4E-18 120.0 9.3 79 2-85 464-548 (557)
76 TIGR03205 pimA dicarboxylate-- 99.5 1.3E-13 2.8E-18 120.2 8.2 80 1-85 449-536 (541)
77 PRK07514 malonyl-CoA synthase; 99.5 2E-13 4.3E-18 116.9 9.3 80 1-85 405-491 (504)
78 PRK03640 O-succinylbenzoic aci 99.5 1.9E-13 4.1E-18 116.5 9.0 79 2-85 389-472 (483)
79 TIGR01734 D-ala-DACP-lig D-ala 99.5 2.4E-13 5.1E-18 116.4 9.5 79 2-85 402-492 (502)
80 PRK08633 2-acyl-glycerophospho 99.5 3.1E-13 6.8E-18 126.5 10.0 81 1-85 1047-1133(1146)
81 PRK08316 acyl-CoA synthetase; 99.4 2.8E-13 6.2E-18 116.0 8.9 80 1-85 423-509 (523)
82 PRK06178 acyl-CoA synthetase; 99.4 3.7E-13 7.9E-18 117.9 8.7 78 2-85 471-555 (567)
83 PRK04813 D-alanine--poly(phosp 99.4 4.6E-13 9.9E-18 114.2 9.1 79 2-85 404-493 (503)
84 PRK07786 long-chain-fatty-acid 99.4 5E-13 1.1E-17 116.7 9.4 80 1-85 427-514 (542)
85 PRK08974 long-chain-fatty-acid 99.4 4.4E-13 9.6E-18 117.3 8.9 88 2-114 461-554 (560)
86 TIGR01923 menE O-succinylbenzo 99.4 3.1E-13 6.7E-18 113.5 6.9 80 1-85 348-432 (436)
87 PRK06087 short chain acyl-CoA 99.4 8.1E-13 1.8E-17 115.1 9.6 80 2-85 439-526 (547)
88 PRK13383 acyl-CoA synthetase; 99.4 6.3E-13 1.4E-17 115.2 8.8 80 1-85 424-510 (516)
89 PRK08276 long-chain-fatty-acid 99.4 4.8E-13 1E-17 115.0 7.9 90 1-115 397-496 (502)
90 PRK08162 acyl-CoA synthetase; 99.4 8.8E-13 1.9E-17 114.6 9.5 79 1-85 444-529 (545)
91 PRK09274 peptide synthase; Pro 99.4 4.8E-13 1.1E-17 116.6 7.7 81 2-85 449-538 (552)
92 PRK06187 long-chain-fatty-acid 99.4 1.3E-12 2.7E-17 111.5 9.5 80 1-85 423-509 (521)
93 PRK06164 acyl-CoA synthetase; 99.4 1.4E-12 3E-17 113.3 9.1 78 2-85 435-522 (540)
94 PLN02479 acetate-CoA ligase 99.4 1E-12 2.3E-17 115.6 8.1 79 1-85 458-548 (567)
95 PRK12476 putative fatty-acid-- 99.4 7.6E-13 1.7E-17 117.8 6.8 85 2-112 504-603 (612)
96 TIGR03443 alpha_am_amid L-amin 99.4 1.5E-12 3.3E-17 125.3 8.8 80 1-85 706-818 (1389)
97 TIGR02262 benz_CoA_lig benzoat 99.3 2.9E-12 6.2E-17 110.5 8.4 80 1-85 412-501 (508)
98 TIGR02372 4_coum_CoA_lig 4-cou 99.3 4E-12 8.7E-17 109.6 7.9 75 1-85 303-386 (386)
99 PRK10252 entF enterobactin syn 99.3 1.1E-11 2.4E-16 118.1 8.6 80 1-85 865-957 (1296)
100 PRK12316 peptide synthase; Pro 99.3 1E-11 2.3E-16 132.3 8.1 79 1-85 2409-2494(5163)
101 PRK09192 acyl-CoA synthetase; 99.2 1.1E-11 2.5E-16 109.3 6.7 86 2-113 467-564 (579)
102 PRK12316 peptide synthase; Pro 99.2 1.3E-11 2.9E-16 131.5 7.9 76 1-85 914-996 (5163)
103 PLN02736 long-chain acyl-CoA s 99.2 3.4E-11 7.3E-16 108.4 9.3 81 2-85 517-631 (651)
104 PRK12467 peptide synthase; Pro 99.2 1.7E-11 3.7E-16 128.7 8.3 79 1-85 3499-3584(3956)
105 PRK12467 peptide synthase; Pro 99.1 9.6E-11 2.1E-15 123.2 8.5 79 1-85 918-1008(3956)
106 PRK05691 peptide synthase; Val 99.1 1.1E-10 2.3E-15 123.4 8.1 79 1-85 2596-2687(4334)
107 PRK08180 feruloyl-CoA synthase 99.1 4.3E-11 9.3E-16 106.9 4.3 79 2-85 474-580 (614)
108 PRK05691 peptide synthase; Val 99.1 1.7E-10 3.8E-15 121.8 8.9 79 1-85 1533-1618(4334)
109 PRK07768 long-chain-fatty-acid 99.1 1.3E-10 2.9E-15 101.2 6.2 87 1-112 442-542 (545)
110 PRK05850 acyl-CoA synthetase; 99.0 1.1E-09 2.4E-14 96.3 6.6 85 1-112 464-565 (578)
111 PRK12582 acyl-CoA synthetase; 98.9 1.7E-09 3.8E-14 96.8 4.7 79 2-85 486-591 (624)
112 PLN02387 long-chain-fatty-acid 98.8 2.1E-08 4.5E-13 91.8 8.9 81 2-85 565-679 (696)
113 PLN02861 long-chain-fatty-acid 98.8 1.8E-08 4E-13 91.4 8.4 81 2-85 523-636 (660)
114 PLN02614 long-chain acyl-CoA s 98.7 4.2E-08 9.1E-13 89.3 8.9 81 2-85 526-639 (666)
115 PLN02430 long-chain-fatty-acid 98.5 3.9E-07 8.4E-12 83.0 9.3 80 2-85 523-636 (660)
116 KOG1178|consensus 98.5 2.1E-07 4.6E-12 89.4 6.2 79 2-85 483-569 (1032)
117 PTZ00342 acyl-CoA synthetase; 98.2 4E-06 8.6E-11 78.3 8.6 29 2-30 600-628 (746)
118 TIGR02155 PA_CoA_ligase phenyl 98.1 8.3E-06 1.8E-10 69.8 7.9 75 2-85 324-416 (422)
119 PTZ00216 acyl-CoA synthetase; 98.1 2E-05 4.4E-10 72.1 9.4 81 2-85 566-681 (700)
120 PF14535 AMP-binding_C_2: AMP- 96.8 0.0047 1E-07 43.5 6.0 74 3-85 1-90 (96)
121 PTZ00297 pantothenate kinase; 96.7 0.0074 1.6E-07 60.7 8.9 30 2-31 866-895 (1452)
122 COG1022 FAA1 Long-chain acyl-C 93.8 0.12 2.6E-06 48.1 5.5 27 2-28 479-505 (613)
123 KOG1256|consensus 88.8 0.84 1.8E-05 43.1 5.4 30 2-31 557-586 (691)
124 TIGR03335 F390_ftsA coenzyme F 87.0 3 6.6E-05 36.4 7.5 21 2-22 336-356 (445)
125 KOG1180|consensus 79.9 5.8 0.00013 37.2 6.5 67 2-75 545-643 (678)
126 KOG3628|consensus 73.0 10 0.00023 38.1 6.4 87 2-117 1258-1353(1363)
127 COG1541 PaaK Coenzyme F390 syn 62.3 35 0.00076 30.8 7.2 27 2-28 340-369 (438)
128 COG0075 Serine-pyruvate aminot 42.6 56 0.0012 28.9 5.2 46 3-54 114-159 (383)
129 PF11455 DUF3018: Protein of 38.0 25 0.00053 23.7 1.7 18 106-123 9-26 (65)
130 PF00403 HMA: Heavy-metal-asso 37.3 38 0.00083 20.9 2.5 42 8-54 13-58 (62)
131 PF01037 AsnC_trans_reg: AsnC 36.7 1.1E+02 0.0023 19.2 4.9 42 8-54 12-55 (74)
132 PF10590 PNPOx_C: Pyridoxine 5 34.3 3.3 7.1E-05 25.4 -2.7 29 1-29 1-29 (42)
133 cd00495 Ribosomal_L25_TL5_CTC 32.5 35 0.00076 23.5 1.9 40 73-132 3-42 (91)
134 PRK05943 50S ribosomal protein 31.8 34 0.00074 23.9 1.8 31 73-123 4-34 (94)
135 PHA00691 hypothetical protein 27.6 45 0.00097 22.2 1.6 16 117-132 13-28 (68)
136 PF01386 Ribosomal_L25p: Ribos 26.6 29 0.00063 23.9 0.7 39 74-132 2-40 (88)
137 PRK05934 type III secretion sy 25.3 1.5E+02 0.0033 26.0 4.9 61 9-75 74-148 (341)
138 PF06092 DUF943: Enterobacteri 24.1 1E+02 0.0023 24.0 3.4 15 71-85 44-58 (157)
139 PF09580 Spore_YhcN_YlaJ: Spor 22.9 85 0.0018 23.8 2.7 22 8-29 77-98 (177)
140 COG1214 Inactive homolog of me 22.2 57 0.0012 26.3 1.7 36 96-131 36-74 (220)
141 PF08478 POTRA_1: POTRA domain 22.1 35 0.00076 21.5 0.4 23 5-27 33-55 (69)
142 PRK15348 type III secretion sy 21.9 2.6E+02 0.0056 23.3 5.5 61 9-75 110-185 (249)
143 COG1504 Uncharacterized conser 21.7 2.8E+02 0.006 20.8 5.1 23 4-29 47-69 (121)
144 PF01883 DUF59: Domain of unkn 20.8 1.1E+02 0.0023 19.7 2.5 18 9-26 55-72 (72)
145 COG4472 Uncharacterized protei 20.6 58 0.0013 23.0 1.2 33 107-139 29-64 (88)
146 PF06135 DUF965: Bacterial pro 20.5 78 0.0017 22.1 1.8 36 104-139 23-61 (79)
No 1
>KOG1179|consensus
Probab=99.89 E-value=4.4e-24 Score=191.18 Aligned_cols=117 Identities=26% Similarity=0.444 Sum_probs=110.0
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCee-EEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTL-GVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWL 72 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~-~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~ 72 (149)
|+|||||++|||++|....+++||.||||..|..+|+ +|| .+.|.+.+..++++ .||+|++|+++++
T Consensus 516 WKGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~-----~LP~YA~P~FlRl 590 (649)
T KOG1179|consen 516 WKGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRE-----NLPSYARPRFLRL 590 (649)
T ss_pred ecCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcccchHHHHHHHHHh-----hCccccchHHHHH
Confidence 9999999999999999999999999999999999999 888 46788999999999 9999999999999
Q ss_pred ecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCC----ceEeec-CCCceeeCCHHHHHhhhhc
Q psy8228 73 WKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNEN----AFYFPE-EPGILIGMIKESRAESHFN 142 (149)
Q Consensus 73 vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~----~~y~~~-~~~~y~~~~~~~~~~~~~~ 142 (149)
++++++|+|.|.+ |..|+++||++. ++|+++ ..+.|+|||.|.|+.+..+
T Consensus 591 ~~~i~~TgTFKl~--------------------K~~L~~egf~p~~~~dply~~~~~~~~y~Plt~~~y~~i~~g 645 (649)
T KOG1179|consen 591 QDEIEKTGTFKLQ--------------------KTELQKEGFNPAIISDPLYYLDNAGKSYVPLTQEMYSAISAG 645 (649)
T ss_pred HhhhhcccchhhH--------------------HHHHHHccCCccccCCceEEEeccCCccccCCHHHHHHHhcC
Confidence 9999999999999 999999999997 899999 5556999999999998754
No 2
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.84 E-value=1.1e-20 Score=178.36 Aligned_cols=112 Identities=20% Similarity=0.204 Sum_probs=100.1
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.+||+|.+|+|+|+||+. ++..+| ..++.++|+++|++ ||+||+|+.|.+++
T Consensus 865 ~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~~~~~~L~~~l~~------l~~y~vP~~i~~v~ 937 (994)
T PRK07868 865 ARGPVYTEPVTDALGRIGGVDLAVTYGVEVGG-RQLAVAAVTLRPGAAITAADLTEALAS------LPVGLGPDIVHVVP 937 (994)
T ss_pred CCceEcHHHHHHHHhcCCCeeEEEEEeecCCC-CceEEEEEEeCCCCcCCHHHHHHHHHh------CCCCcCCeEEEEeC
Confidence 68999999999999999999999999999865 344333 24678999999964 89999999999999
Q ss_pred ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCC--ceEeec-CCCceeeCCHHHHHhhh
Q psy8228 75 NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNEN--AFYFPE-EPGILIGMIKESRAESH 140 (149)
Q Consensus 75 ~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~--~~y~~~-~~~~y~~~~~~~~~~~~ 140 (149)
+||+|+|||++ |+.|++.+++.. ++|+++ +.+.|++||++.|+++.
T Consensus 938 ~lP~T~sGKi~--------------------r~~L~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (994)
T PRK07868 938 EIPLSATYRPT--------------------VSALRAAGIPKPGRQAWYFDPETNRYRRLTPAVRAELT 986 (994)
T ss_pred CCCCCccccEe--------------------hHHHHhcCCCCCCCceEEEcCCCCeeEECCHHHHHHHh
Confidence 99999999999 999999999865 889999 88899999999999985
No 3
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.84 E-value=1.4e-20 Score=166.23 Aligned_cols=115 Identities=29% Similarity=0.466 Sum_probs=103.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCee-EEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTL-GVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWL 72 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~-~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~ 72 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..+++ .++ ...+.++++++|++ +|+.|++|+.+++
T Consensus 467 ~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~-----~L~~~~~P~~i~~ 541 (600)
T PRK08279 467 WKGENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAEFDLAALAAHLYE-----RLPAYAVPLFVRL 541 (600)
T ss_pred ECCcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCccCCHHHHHHHHHh-----hCccccCCeEEEe
Confidence 3799999999999999999999999999998765444 322 34678999999999 9999999999999
Q ss_pred ecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCC----ceEeec-CCCceeeCCHHHHHhhh
Q psy8228 73 WKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNEN----AFYFPE-EPGILIGMIKESRAESH 140 (149)
Q Consensus 73 vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~----~~y~~~-~~~~y~~~~~~~~~~~~ 140 (149)
+++||+|++||++ |..|+++.++.+ ++|+++ ..+.|.|||.|.++++.
T Consensus 542 v~~lP~t~~GKi~--------------------r~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (600)
T PRK08279 542 VPELETTGTFKYR--------------------KVDLRKEGFDPSKVDDPLYVLDPGSGGYVPLTAELYAEIA 594 (600)
T ss_pred ecCCCCCcchhhh--------------------HHHHhhcCCCccccCCeeEEEecCCCceEecCHHHHHHHh
Confidence 9999999999999 999999999886 789999 78899999999999975
No 4
>KOG1176|consensus
Probab=99.83 E-value=9.9e-21 Score=169.97 Aligned_cols=87 Identities=16% Similarity=0.193 Sum_probs=81.6
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|++|+|.|||++|.+||+|.||||||+||+.+|+.++| ..+++++|.+||++ +|++||+|+.+.|+
T Consensus 436 ~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k-----~l~~y~~~~~V~Fv 510 (537)
T KOG1176|consen 436 YGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRK-----KLPAYKLPGGVVFV 510 (537)
T ss_pred eCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHh-----hCChhhccCeEEEe
Confidence 5899999999999999999999999999999988777555 57889999999999 99999999999999
Q ss_pred cccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 74 KNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 74 d~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
++||+|+||||+ |+.||+.
T Consensus 511 d~lPKs~~GKi~--------------------R~~lr~~ 529 (537)
T KOG1176|consen 511 DELPKTPNGKIL--------------------RRKLRDI 529 (537)
T ss_pred ccCCCCCcchHH--------------------HHHHHHH
Confidence 999999999999 9999986
No 5
>KOG1177|consensus
Probab=99.77 E-value=5.7e-19 Score=156.49 Aligned_cols=79 Identities=27% Similarity=0.226 Sum_probs=73.7
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE---------ecCCHHHHHHHHhccccccCCCCCCceeEEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL---------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWL 72 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A---------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~ 72 (149)
|||||||.|||+.|.+||.|.+|.||||||...++.+|| ..++.++|..+|+. +|+.||+|+++.|
T Consensus 490 GGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~-----klaHFKiPky~vf 564 (596)
T KOG1177|consen 490 GGENVYPTELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGKTTAETLKAMCKG-----KLAHFKIPKYFVF 564 (596)
T ss_pred CCcccChHHHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeeccccccccHHHHHHHHhc-----ccccccCCcEEEE
Confidence 799999999999999999999999999999887777766 22689999999999 9999999999999
Q ss_pred ecccCCCCCCccc
Q psy8228 73 WKNWTLVDVFKTQ 85 (149)
Q Consensus 73 vd~lP~T~tGKi~ 85 (149)
++++|+|.||||+
T Consensus 565 ~~~FPlT~tGKIq 577 (596)
T KOG1177|consen 565 VDEFPLTTTGKIQ 577 (596)
T ss_pred eccCcccccccch
Confidence 9999999999999
No 6
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.77 E-value=8.1e-19 Score=154.96 Aligned_cols=90 Identities=18% Similarity=0.149 Sum_probs=81.2
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ec----CCHHHHHHHHhccccccCCCCCCceeEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KK----IKLFQVFTSMKRQQCIRAFLTYKFIMAIW 71 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~----~~~~~L~~~l~~~~~~~~L~~ykvP~~v~ 71 (149)
+||+||||.|||++|.+||+|.||+|+|+||+.+++.++| .. .+.++|.++|+. +|+.|++|+.+.
T Consensus 429 ~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~~~~~~~i~~~~~~-----~l~~~~~P~~v~ 503 (534)
T COG0318 429 SGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDAELTAEELRAFLRK-----RLALYKVPRIVV 503 (534)
T ss_pred eCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCCCCCCHHHHHHHHHh-----hhhcccCCeEEE
Confidence 5899999999999999999999999999999888777554 11 278999999999 999999999999
Q ss_pred EecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCC
Q psy8228 72 LWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFN 115 (149)
Q Consensus 72 ~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~ 115 (149)
++++||+|++||++ |+.||++...
T Consensus 504 ~v~~lP~t~sGKi~--------------------r~~lr~~~~~ 527 (534)
T COG0318 504 FVDELPRTASGKID--------------------RRALREEYRA 527 (534)
T ss_pred EeCCCCCCCchhhh--------------------HHHHHHHHHh
Confidence 99999999999999 9999987443
No 7
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.75 E-value=8.6e-18 Score=147.20 Aligned_cols=116 Identities=14% Similarity=0.103 Sum_probs=99.9
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeE-EE------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLG-VL------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~-~A------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.+||+|.+|+|+|+++...++.. ++ ...+.+++.++|+.+ ..|++|++|..+.+++
T Consensus 409 ~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~l~~~---~~l~~~~~P~~~~~v~ 485 (540)
T PRK13388 409 DGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGATFDPDAFAAFLAAQ---PDLGTKAWPRYVRIAA 485 (540)
T ss_pred CCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCcCCHHHHHHHHHhh---ccCCcccCCcEEEEec
Confidence 6999999999999999999999999999987665553 22 346788999999761 1499999999999999
Q ss_pred ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCC---ceEeecCCCceeeCCHHHHHhhh
Q psy8228 75 NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNEN---AFYFPEEPGILIGMIKESRAESH 140 (149)
Q Consensus 75 ~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~---~~y~~~~~~~y~~~~~~~~~~~~ 140 (149)
+||+|++||++ |+.|+++....+ .+|..++.+.|..|+...++++-
T Consensus 486 ~iP~t~~GKv~--------------------R~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (540)
T PRK13388 486 DLPSTATNKVL--------------------KRELIAQGWATGDPVTLWVRRGGPAYRLMSEPAKAALA 534 (540)
T ss_pred cCCCCCcceee--------------------HHhHHHhccCCCCCceEEEcCCCceEEecCHHHHHHHH
Confidence 99999999999 999999987665 67888888899999999888763
No 8
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=1.2e-17 Score=143.86 Aligned_cols=83 Identities=14% Similarity=-0.076 Sum_probs=75.6
Q ss_pred EEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecCCHHHHHHHHhccccccCCCCCCceeEEEEecccCC
Q psy8228 4 ENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKNWTL 78 (149)
Q Consensus 4 enVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~lP~ 78 (149)
+||||. ||++|.+||+|.||+|+|+||+.+++.++| ..++.++|++||++ +||+ |+|+.+.++++||+
T Consensus 239 ~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~~~~~~el~~~l~~-----~L~~-kvP~~v~~v~~lP~ 311 (365)
T PRK09188 239 DNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAELPADEKSLRARLAG-----AKPP-KPPEHIQPVAALPR 311 (365)
T ss_pred eeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECCCCCHHHHHHHHHh-----hchh-cCCcEEEEECCCCC
Confidence 899999 999999999999999999999887766444 34678999999999 9999 99999999999999
Q ss_pred CCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 79 VDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 79 T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
|+|||++ |+.|+...
T Consensus 312 t~~GKi~--------------------R~~Lr~~~ 326 (365)
T PRK09188 312 DADGTVR--------------------DDILRLIA 326 (365)
T ss_pred CCCCCcc--------------------HHHHHHHh
Confidence 9999999 99999874
No 9
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.71 E-value=7.1e-17 Score=141.34 Aligned_cols=109 Identities=16% Similarity=0.170 Sum_probs=91.2
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.+||+|.+|+|+|++++..+++.++ ..++.+++.++|+++ ..|++|++|..+++++
T Consensus 410 ~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~---~~l~~~~~P~~i~~~~ 486 (529)
T PRK07867 410 DGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAKFDPDAFAEFLAAQ---PDLGPKQWPSYVRVCA 486 (529)
T ss_pred CCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCCCCHHHHHHHHHhh---ccCCcccCCeEEEEee
Confidence 799999999999999999999999999999877666332 246889999999871 1399999999999999
Q ss_pred ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCC-ceEeecCCCceeeCCHHHHHhh
Q psy8228 75 NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNEN-AFYFPEEPGILIGMIKESRAES 139 (149)
Q Consensus 75 ~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~-~~y~~~~~~~y~~~~~~~~~~~ 139 (149)
++|+|++||++ |+.|+++..+.. ++||.+ .+|+..++++
T Consensus 487 ~iP~t~~GKv~--------------------r~~L~~~~~~~~~~~~~~~------~~~~~~~~~~ 526 (529)
T PRK07867 487 ELPRTATFKVL--------------------KRQLSAEGVDCADPVWWIR------RLTPSDYAAL 526 (529)
T ss_pred ccCCCCCccee--------------------HHHHHHhcCCCCCCeeehh------cCChhhhhhh
Confidence 99999999999 999999988777 787754 3455555543
No 10
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.70 E-value=4.7e-17 Score=141.32 Aligned_cols=83 Identities=12% Similarity=0.080 Sum_probs=68.1
Q ss_pred CeEEechHHHHHHHhc-CCCcccEEEEEEEcCCCC-eeEEE-e----------cCCHHHHHHHHhccccccCCCCCCcee
Q psy8228 2 RGENVATSEVEDALSK-IVQLKDAAVYGVETSALN-TLGVL-K----------KIKLFQVFTSMKRQQCIRAFLTYKFIM 68 (149)
Q Consensus 2 gGenVsp~EVE~vL~~-hP~V~eaaVvGVpd~~~~-~~~~A-~----------~~~~~~L~~~l~~~~~~~~L~~ykvP~ 68 (149)
+|+||+|.|||++|.+ ||+|.||+|+|+||+.++ +.++| . ..+.++|+++|++ .+.++|++|+.|.
T Consensus 386 ~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~-~l~~~l~~~~~~~ 464 (499)
T PLN03051 386 GGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQE-AIQTNLNPLFKVS 464 (499)
T ss_pred CCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHH-HHHhhcCCccCCc
Confidence 7999999999999996 999999999999998766 33332 1 2567888888865 3334788866677
Q ss_pred EEEEecccCCCCCCccc
Q psy8228 69 AIWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 69 ~v~~vd~lP~T~tGKi~ 85 (149)
.++++++||+|++||++
T Consensus 465 ~i~~v~~lP~t~~GKi~ 481 (499)
T PLN03051 465 RVKIVPELPRNASNKLL 481 (499)
T ss_pred eEEEcCCCCCCCCccHH
Confidence 89999999999999999
No 11
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.68 E-value=1.1e-16 Score=138.43 Aligned_cols=80 Identities=21% Similarity=0.135 Sum_probs=72.0
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..++..+| ...+.++++++|++ +|++|++|+.+.+++
T Consensus 352 ~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~~~~~~l~~~~~~-----~L~~~~~P~~i~~v~ 426 (452)
T PRK07445 352 TGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPSISLEELKTAIKD-----QLSPFKQPKHWIPVP 426 (452)
T ss_pred ECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCCCCHHHHHHHHHH-----hCCcccCCeEEEEec
Confidence 3799999999999999999999999999998876655443 23567899999999 999999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 427 ~lP~t~~GKi~ 437 (452)
T PRK07445 427 QLPRNPQGKIN 437 (452)
T ss_pred CCCCCCCcccC
Confidence 99999999999
No 12
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.68 E-value=1.5e-16 Score=143.35 Aligned_cols=86 Identities=14% Similarity=0.117 Sum_probs=75.7
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCH---HHHHHHHhccccccCCCCCCceeEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKL---FQVFTSMKRQQCIRAFLTYKFIMAIW 71 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~---~~L~~~l~~~~~~~~L~~ykvP~~v~ 71 (149)
+|+||+|.|||++|.+||+|.||+|+|+||+..++..+| ...+. ++|+++|++ +|++|++|+.|.
T Consensus 528 ~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i~ 602 (652)
T TIGR01217 528 QGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRA-----GLSPRHVPDEII 602 (652)
T ss_pred CCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHh-----hCCCCcCCCEEE
Confidence 799999999999999999999999999999876555443 12333 578899988 999999999999
Q ss_pred EecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 72 LWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 72 ~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
++++||+|+|||++ |+.||+.
T Consensus 603 ~v~~lP~T~sGKi~--------------------r~~Lr~~ 623 (652)
T TIGR01217 603 EVPGIPHTLTGKRV--------------------EVAVKRV 623 (652)
T ss_pred ECCCCCCCCCccCh--------------------HHHHHHH
Confidence 99999999999999 9999987
No 13
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.66 E-value=2e-16 Score=142.08 Aligned_cols=87 Identities=16% Similarity=0.128 Sum_probs=74.4
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecC----CHHHHHHHHhccccccCCCCCCceeEEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKI----KLFQVFTSMKRQQCIRAFLTYKFIMAIWL 72 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~----~~~~L~~~l~~~~~~~~L~~ykvP~~v~~ 72 (149)
.|.+|+|.|||++|.+||+|+||||||+||+..++.+.| ... -.++|.+++++ .+.+|+.|+.|+|
T Consensus 425 sG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~~L~~ei~~~vr~-----~~~~~~~p~~i~f 499 (528)
T COG0365 425 SGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPNELAEEIRRHVAR-----NIGPHAIPRKIRF 499 (528)
T ss_pred cCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCChHHHHHHHHHHHHh-----ccCcccCCceEEE
Confidence 599999999999999999999999999999876665443 222 24677788877 7778999999999
Q ss_pred ecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 73 WKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 73 vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
+++||+|.||||. |+.||+..
T Consensus 500 v~~LPkT~sGKI~--------------------R~~lr~~~ 520 (528)
T COG0365 500 VDELPKTASGKIQ--------------------RRLLRKIL 520 (528)
T ss_pred ecCCCCCCcccHH--------------------HHHHHHHH
Confidence 9999999999999 99999763
No 14
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.65 E-value=4.6e-16 Score=129.05 Aligned_cols=80 Identities=19% Similarity=0.117 Sum_probs=71.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.++|+++|++ +|+.|++|+.+.++
T Consensus 261 ~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i~~~~~~-----~l~~~~~P~~i~~v 335 (358)
T PRK07824 261 TGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEALRAHVAR-----TLDRTAAPRELHVV 335 (358)
T ss_pred ECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHHHHHHHh-----hCccccCCCEEEEe
Confidence 3799999999999999999999999999998776554333 24678899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
++||+|++||++
T Consensus 336 ~~lP~t~~GKi~ 347 (358)
T PRK07824 336 DELPRRGIGKVD 347 (358)
T ss_pred cCCCCCCCcccc
Confidence 999999999999
No 15
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.65 E-value=3.6e-16 Score=141.02 Aligned_cols=86 Identities=13% Similarity=0.153 Sum_probs=74.0
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE----e------cCCH----HHHHHHHhccccccCCCCCCce
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL----K------KIKL----FQVFTSMKRQQCIRAFLTYKFI 67 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A----~------~~~~----~~L~~~l~~~~~~~~L~~ykvP 67 (149)
+|+||+|.|||++|.+||+|.||+|+|++|+..++..+| . ..+. ++|+++|++ +|++|++|
T Consensus 521 ~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~-----~l~~~~~P 595 (647)
T PTZ00237 521 SGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQ-----DIESLAVL 595 (647)
T ss_pred CCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHh-----hcCccccC
Confidence 799999999999999999999999999999876655433 1 1243 355677777 99999999
Q ss_pred eEEEEecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 68 MAIWLWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 68 ~~v~~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
+.|.++++||+|+|||++ |+.||+.
T Consensus 596 ~~i~~v~~lP~T~sGKi~--------------------R~~Lr~~ 620 (647)
T PTZ00237 596 RKIIIVNQLPKTKTGKIP--------------------RQIISKF 620 (647)
T ss_pred cEEEEcCCCCCCCCccEe--------------------HHHHHHH
Confidence 999999999999999999 9999887
No 16
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.64 E-value=3.3e-16 Score=105.17 Aligned_cols=69 Identities=16% Similarity=0.090 Sum_probs=55.7
Q ss_pred HHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-ecCCHHHHHHHHhccccccCCCCCCcee--EEEEecc-cCCCCCCc
Q psy8228 10 EVEDALSKIVQLKDAAVYGVETSALNTLGVL-KKIKLFQVFTSMKRQQCIRAFLTYKFIM--AIWLWKN-WTLVDVFK 83 (149)
Q Consensus 10 EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-~~~~~~~L~~~l~~~~~~~~L~~ykvP~--~v~~vd~-lP~T~tGK 83 (149)
|||++|.+||+|.||+|+|++|+.+|...+| -..+.++|+++|++ +||+|++|+ .+..+++ ||+|+|||
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~~~~~i~~~~~~-----~l~~~~~P~~~~~v~~~~~lP~t~~GK 73 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVLDEEEIRDHLRD-----KLPPYMVPRRIRFVRLDEELPRTPSGK 73 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEEHHHHHHHHHHH-----HS-GGGS-SEEEEEEESSSEEBETTSS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEeeecccccchhh-----hCCCcceeeEEEEccccCcCCCCCCCC
Confidence 8999999999999999999998876655555 22266999999999 999999995 4444466 99999999
No 17
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.64 E-value=7.4e-16 Score=138.07 Aligned_cols=87 Identities=15% Similarity=0.061 Sum_probs=75.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCH---HHHHHHHhccccccCCCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKL---FQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~---~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
.+|+||+|.|||++|.+||+|.||+|+|++++..++..++ ...+. ++|.++|++ +|++|++|+.|
T Consensus 526 ~~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~-----~L~~~~~P~~i 600 (655)
T PRK03584 526 RGGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRT-----NLSPRHVPDKI 600 (655)
T ss_pred cCcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHh-----hCCCCcCCCEE
Confidence 3799999999999999999999999999999766555333 12332 578888988 99999999999
Q ss_pred EEecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 71 WLWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
.++++||+|++||++ |+.||+.
T Consensus 601 ~~v~~lP~t~sGKi~--------------------r~~lr~~ 622 (655)
T PRK03584 601 IAVPDIPRTLSGKKV--------------------ELPVKKL 622 (655)
T ss_pred EECCCCCCCCCccch--------------------HHHHHHH
Confidence 999999999999999 9999986
No 18
>PLN02654 acetate-CoA ligase
Probab=99.64 E-value=8.3e-16 Score=139.06 Aligned_cols=88 Identities=19% Similarity=0.112 Sum_probs=75.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCH---HHHHHHHhccccccCCCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKL---FQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~---~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
.+|+||+|.|||++|.+||+|.||+|+|+||+..++..++ ...+. ++|+++|++ +|++|++|+.|
T Consensus 541 ~~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~-----~L~~~~~P~~i 615 (666)
T PLN02654 541 VSGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRN-----QIGAFAAPDKI 615 (666)
T ss_pred eCCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHH-----hCCCCcCCCEE
Confidence 3799999999999999999999999999999876554433 12333 367888888 99999999999
Q ss_pred EEecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 71 WLWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
.++++||+|.+||++ |+.|++..
T Consensus 616 ~~v~~lP~T~sGKi~--------------------r~~l~~~~ 638 (666)
T PLN02654 616 HWAPGLPKTRSGKIM--------------------RRILRKIA 638 (666)
T ss_pred EECCCCCCCCCcCch--------------------HHHHHHHH
Confidence 999999999999999 99998773
No 19
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.63 E-value=2e-16 Score=138.34 Aligned_cols=80 Identities=21% Similarity=0.255 Sum_probs=74.8
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE------ecCCHHHHHHHHhccccccCCCCCCceeEEEEecc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKN 75 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~ 75 (149)
|||+|...|||+.|+.||.|.+|++|+.||.-.|++.|| ..++..+|++||+++ .|+.||+|++|+++++
T Consensus 443 gGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~~~~~qlr~~L~~~----GlAa~K~PDrie~v~~ 518 (542)
T COG1021 443 GGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPPLRAAQLRRFLRER----GLAAFKLPDRIEFVDS 518 (542)
T ss_pred ccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCCCCCHHHHHHHHHHc----chhhhcCCcceeeccc
Confidence 799999999999999999999999999999888887666 457899999999993 8999999999999999
Q ss_pred cCCCCCCccc
Q psy8228 76 WTLVDVFKTQ 85 (149)
Q Consensus 76 lP~T~tGKi~ 85 (149)
||.|+.|||+
T Consensus 519 ~P~T~VGKId 528 (542)
T COG1021 519 LPLTAVGKID 528 (542)
T ss_pred CCCccccccc
Confidence 9999999999
No 20
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.63 E-value=8.2e-16 Score=134.12 Aligned_cols=79 Identities=22% Similarity=0.186 Sum_probs=71.8
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.++|+++|++ +|++|++|+.+.+++
T Consensus 456 ~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i~~v~ 530 (549)
T PRK07788 456 GGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDAIKDYVRD-----NLARYKVPRDVVFLD 530 (549)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHHHHHHHHH-----hhhcCCCCcEEEEeC
Confidence 799999999999999999999999999998776655333 24678999999999 999999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
+||+|++||++
T Consensus 531 ~lP~t~~GKi~ 541 (549)
T PRK07788 531 ELPRNPTGKVL 541 (549)
T ss_pred CCCCCCCcCEe
Confidence 99999999999
No 21
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.62 E-value=1.4e-15 Score=135.97 Aligned_cols=87 Identities=15% Similarity=0.134 Sum_probs=75.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE----e---c--------CCHHHHHHHHhccccccCCCCCC
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL----K---K--------IKLFQVFTSMKRQQCIRAFLTYK 65 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A----~---~--------~~~~~L~~~l~~~~~~~~L~~yk 65 (149)
.+|+||+|.|||++|.+||+|.||+|+|+||+..++..++ . . ...++|+++|++ +|++|+
T Consensus 500 ~~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~-----~L~~~~ 574 (628)
T TIGR02316 500 VAGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVR-----QLGAVA 574 (628)
T ss_pred eCCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHH-----hcCCCc
Confidence 4799999999999999999999999999999876555433 1 1 124678899998 999999
Q ss_pred ceeEEEEecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 66 FIMAIWLWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 66 vP~~v~~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
+|+.|.++++||+|+|||++ |+.|++.
T Consensus 575 ~P~~v~~v~~lP~t~sGKi~--------------------r~~L~~~ 601 (628)
T TIGR02316 575 RPARVYFVAALPKTRSGKLL--------------------RRSIQAL 601 (628)
T ss_pred CCCEEEEcCCCCCCCchHHH--------------------HHHHHHH
Confidence 99999999999999999999 9999976
No 22
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.61 E-value=1.9e-15 Score=137.31 Aligned_cols=88 Identities=17% Similarity=0.021 Sum_probs=78.2
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE----ecCCHHHHHHHHhccccccC-CCCCCceeEEEEecc
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL----KKIKLFQVFTSMKRQQCIRA-FLTYKFIMAIWLWKN 75 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A----~~~~~~~L~~~l~~~~~~~~-L~~ykvP~~v~~vd~ 75 (149)
++|+||+|.|||++|.+||.+.+++|+|++|+..++..++ ...+.+++.++|++ + |+.|++|+.++++++
T Consensus 619 ~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~~~~~~~~~l~~~~~~-----~~l~~~~vP~~i~~v~~ 693 (718)
T PRK08043 619 IAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTTDSELTREKLQQYARE-----HGVPELAVPRDIRYLKQ 693 (718)
T ss_pred eCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEcCcccCHHHHHHHHHh-----cCCCcccCCceEEEecc
Confidence 4799999999999999999999999999998776555444 45678899999988 6 999999999999999
Q ss_pred cCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 76 WTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 76 lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
+|+|++||++ |+.|++..
T Consensus 694 lP~t~~GKi~--------------------r~~L~~~~ 711 (718)
T PRK08043 694 LPLLGSGKPD--------------------FVTLKSMV 711 (718)
T ss_pred cCcCCCCCcC--------------------HHHHHHHH
Confidence 9999999999 99998764
No 23
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.60 E-value=2.3e-15 Score=132.29 Aligned_cols=88 Identities=20% Similarity=0.198 Sum_probs=77.9
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|+||+|.|||++|.+||+|.||+|+|++++..++..++ ...+.+++.++|++ +|++|++|+.++++
T Consensus 458 ~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~v~~v 532 (560)
T PLN02574 458 YKGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGSTLSQEAVINYVAK-----QVAPYKKVRKVVFV 532 (560)
T ss_pred ECCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcceEEEEEeCCCCCCCHHHHHHHHHH-----hccCcccCcEEEEe
Confidence 4799999999999999999999999999998765544333 24567899999999 99999999999999
Q ss_pred cccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 74 KNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 74 d~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
+++|+|++||++ |+.|++.-
T Consensus 533 ~~iP~t~~GKi~--------------------r~~L~~~~ 552 (560)
T PLN02574 533 QSIPKSPAGKIL--------------------RRELKRSL 552 (560)
T ss_pred eccCCCCcchhh--------------------HHHHHHHH
Confidence 999999999999 99998873
No 24
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.60 E-value=3.9e-15 Score=130.56 Aligned_cols=91 Identities=18% Similarity=0.196 Sum_probs=81.0
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.+||+|.+|+|+|++++..+++.++ ...+.++++++|++ +|+.|++|..+.+++
T Consensus 429 ~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~l~~~~~P~~i~~~~ 503 (542)
T PRK06155 429 RGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTALEPVALVRHCEP-----RLAYFAVPRYVEFVA 503 (542)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCCCHHHHHHHHHh-----hCcCccCCcEEEEec
Confidence 799999999999999999999999999998765555332 34678899999999 999999999999999
Q ss_pred ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCC
Q psy8228 75 NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNEN 117 (149)
Q Consensus 75 ~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~ 117 (149)
++|+|++||++ |+.|+++.++.+
T Consensus 504 ~iP~t~~GKi~--------------------r~~l~~~~~~~~ 526 (542)
T PRK06155 504 ALPKTENGKVQ--------------------KFVLREQGVTAD 526 (542)
T ss_pred cCCCCccccee--------------------HHHHHhhccCCc
Confidence 99999999999 999999987665
No 25
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.59 E-value=5.2e-15 Score=131.61 Aligned_cols=86 Identities=15% Similarity=0.092 Sum_probs=75.2
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCC---HHHHHHHHhccccccCCCCCCceeEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIK---LFQVFTSMKRQQCIRAFLTYKFIMAIW 71 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~---~~~L~~~l~~~~~~~~L~~ykvP~~v~ 71 (149)
+|+||+|.|||++|.+||+|.||+|+|++++..++..++ ...+ .++|+++|++ +|++|++|+.|.
T Consensus 504 ~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i~ 578 (625)
T TIGR02188 504 SGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRK-----EIGPIAKPDKIR 578 (625)
T ss_pred CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHh-----hcCCCccCcEEE
Confidence 799999999999999999999999999999876555433 1122 3678999988 999999999999
Q ss_pred EecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 72 LWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 72 ~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
++++||+|++||++ |+.|++.
T Consensus 579 ~v~~lP~t~sGKi~--------------------r~~l~~~ 599 (625)
T TIGR02188 579 FVPGLPKTRSGKIM--------------------RRLLRKI 599 (625)
T ss_pred ECCCCCCCCCccch--------------------HHHHHHH
Confidence 99999999999999 9999986
No 26
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.59 E-value=5.2e-15 Score=132.04 Aligned_cols=87 Identities=16% Similarity=0.044 Sum_probs=75.9
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----e--cCC---HHHHHHHHhccccccCCCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----K--KIK---LFQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~--~~~---~~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ . ..+ .++|+++|++ +|+.|++|+.+
T Consensus 511 ~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~-----~l~~~~~P~~i 585 (637)
T PRK00174 511 VSGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRK-----EIGPIAKPDVI 585 (637)
T ss_pred eCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHh-----hcCCccCCCEE
Confidence 3799999999999999999999999999998776655433 1 122 4688999998 99999999999
Q ss_pred EEecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 71 WLWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
.++++||+|++||++ |+.|++.
T Consensus 586 ~~v~~lP~t~~GKi~--------------------R~~L~~~ 607 (637)
T PRK00174 586 QFAPGLPKTRSGKIM--------------------RRILRKI 607 (637)
T ss_pred EEcCCCCCCCCcchH--------------------HHHHHHH
Confidence 999999999999999 9999876
No 27
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.59 E-value=2.7e-15 Score=131.64 Aligned_cols=80 Identities=23% Similarity=0.211 Sum_probs=71.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ .+.+.++++++|++ +|++|++|..++++
T Consensus 461 ~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i~~v 535 (562)
T PRK05677 461 VSGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETLTKEQVMEHMRA-----NLTGYKVPKAVEFR 535 (562)
T ss_pred eCCEEECHHHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCCCCHHHHHHHHHH-----hhhhccCCcEEEEe
Confidence 3699999999999999999999999999998765544332 24678899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 536 ~~iP~t~sGKi~ 547 (562)
T PRK05677 536 DELPTTNVGKIL 547 (562)
T ss_pred ccCCCCCccccc
Confidence 999999999999
No 28
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.58 E-value=5e-15 Score=126.34 Aligned_cols=80 Identities=13% Similarity=0.133 Sum_probs=72.3
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecCCHHHHHHHHhccccccCCCCCCceeEEEEecc
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKN 75 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~ 75 (149)
++|+||+|.|||++|.+||+|.||+|+|++++..++..++ ...+.++|+++|++ +|++|++|..+.++++
T Consensus 359 ~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~l~~~~~~-----~l~~~~~P~~~~~~~~ 433 (458)
T PRK09029 359 SGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDSEAAVVNLAEWLQD-----KLARFQQPVAYYLLPP 433 (458)
T ss_pred eCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCcccCHHHHHHHHHh-----hchhccCCeEEEEecc
Confidence 4799999999999999999999999999998876655333 34678899999999 9999999999999999
Q ss_pred cCCCCCCccc
Q psy8228 76 WTLVDVFKTQ 85 (149)
Q Consensus 76 lP~T~tGKi~ 85 (149)
+|+|++||++
T Consensus 434 ~p~t~~gKi~ 443 (458)
T PRK09029 434 ELKNGGIKIS 443 (458)
T ss_pred cccCcCCCcC
Confidence 9999999999
No 29
>PRK07529 AMP-binding domain protein; Validated
Probab=99.58 E-value=4.9e-15 Score=132.85 Aligned_cols=105 Identities=18% Similarity=0.186 Sum_probs=84.1
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCC-CCCceeEEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFL-TYKFIMAIWL 72 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~-~ykvP~~v~~ 72 (149)
.+|+||+|.|||++|.+||+|.+|+|+|+||+..++..++ ...+.++|.+||++ +|+ .+++|+.+.+
T Consensus 473 ~~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~-----~l~~~~~~P~~i~~ 547 (632)
T PRK07529 473 RGGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGASATEAELLAFARD-----HIAERAAVPKHVRI 547 (632)
T ss_pred eCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHH-----hcchhccCCcEEEE
Confidence 3799999999999999999999999999998776554443 34678899999999 886 5899999999
Q ss_pred ecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCC
Q psy8228 73 WKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNEN 117 (149)
Q Consensus 73 vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~ 117 (149)
+++||+|++||++ |++|+.....-. .+..|.+.|....
T Consensus 548 v~~lP~t~~GKi~------r~~Lr~~~~~~~-~~~~~~~~~~~~~ 585 (632)
T PRK07529 548 LDALPKTAVGKIF------KPALRRDAIRRV-LRAALRDAGVEAE 585 (632)
T ss_pred ecCCCCCCCCccc------HHHHHHHHHHHH-HHHHHHhcCCCcc
Confidence 9999999999999 666666433333 3456666665443
No 30
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.58 E-value=4.7e-15 Score=128.60 Aligned_cols=89 Identities=16% Similarity=0.049 Sum_probs=77.8
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE---------ecCCHHHHHHHHhccccccCCCCCCceeEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL---------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIW 71 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A---------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~ 71 (149)
++|+||+|.|||++|.+||+|.+++|+|+++...++..++ ...+.+++.++|++ +|++|++|+.++
T Consensus 444 ~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~~~ 518 (546)
T PRK08314 444 ASGFKVWPAEVENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARGKTTEEEIIAWARE-----HMAAYKYPRIVE 518 (546)
T ss_pred eCCEEECHHHHHHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCCCCCHHHHHHHHHH-----hcccCCCCcEEE
Confidence 4799999999999999999999999999998765554333 12456899999999 999999999999
Q ss_pred EecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCC
Q psy8228 72 LWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGF 114 (149)
Q Consensus 72 ~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~ 114 (149)
+++++|+|++||++ |+.|++.+.
T Consensus 519 ~v~~iP~t~~GKv~--------------------r~~L~~~~~ 541 (546)
T PRK08314 519 FVDSLPKSGSGKIL--------------------WRQLQEQEK 541 (546)
T ss_pred EecCCCCCCcccee--------------------HHHHHHHHh
Confidence 99999999999999 999987654
No 31
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.58 E-value=6e-15 Score=126.37 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=72.1
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||.|.||+|+|++++..+++.++ ...+.++++++|++ +|++|++|..+.++
T Consensus 422 ~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~-----~l~~~~~p~~i~~v 496 (515)
T TIGR03098 422 TSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPGGEELDRAALLAECRA-----RLPNYMVPALIHVR 496 (515)
T ss_pred cCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCCCCCCCHHHHHHHHHh-----hCccccCCCEEEEe
Confidence 3799999999999999999999999999998876655433 23578899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 497 ~~iP~t~~GK~~ 508 (515)
T TIGR03098 497 QALPRNANGKID 508 (515)
T ss_pred ccCCCCCCCCCc
Confidence 999999999999
No 32
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.58 E-value=3e-15 Score=130.63 Aligned_cols=80 Identities=11% Similarity=0.076 Sum_probs=68.9
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeE-E-E----ecCCHHHHHHHHhccccccCCCCC--CceeEEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLG-V-L----KKIKLFQVFTSMKRQQCIRAFLTY--KFIMAIWL 72 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~-~-A----~~~~~~~L~~~l~~~~~~~~L~~y--kvP~~v~~ 72 (149)
.+|+||+|.|||++|.+||+|.+|+|++++++..++.. + + ...+.+++.++|++ +|+.| ++|+.+.+
T Consensus 423 ~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~l~~~l~~~P~~~~~ 497 (525)
T PRK05851 423 VAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRGPDEAGARSEVVQ-----RVASECGVVPSDVVF 497 (525)
T ss_pred ECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecCcchHHHHHHHHH-----HHHHHhCCCccEEEE
Confidence 37999999999999999999999999999987765442 2 1 23466788888888 88888 99999999
Q ss_pred ec--ccCCCCCCccc
Q psy8228 73 WK--NWTLVDVFKTQ 85 (149)
Q Consensus 73 vd--~lP~T~tGKi~ 85 (149)
++ +||+|++||++
T Consensus 498 v~~~~lP~t~~GKi~ 512 (525)
T PRK05851 498 VAPGSLPRTSSGKLR 512 (525)
T ss_pred ECCCCcCcCcchHHH
Confidence 99 89999999999
No 33
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.57 E-value=6.5e-15 Score=130.48 Aligned_cols=80 Identities=14% Similarity=0.122 Sum_probs=69.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecC----------CHHHHHHHHhccccccCCCC
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKI----------KLFQVFTSMKRQQCIRAFLT 63 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~----------~~~~L~~~l~~~~~~~~L~~ 63 (149)
++|+||+|.|||++|.+||+|.+|+|+|+|++..++..+| ... +..+++++|++ +|++
T Consensus 448 ~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~L~~ 522 (579)
T PLN03102 448 SGGENISSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRE-----NLPH 522 (579)
T ss_pred ECCEEECHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccccccccccccccHHHHHHHHHh-----hccc
Confidence 4799999999999999999999999999999876554333 111 35679999999 9999
Q ss_pred CCceeEEEEecccCCCCCCccc
Q psy8228 64 YKFIMAIWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 64 ykvP~~v~~vd~lP~T~tGKi~ 85 (149)
|++|..+.+++++|+|++||++
T Consensus 523 ~~~P~~i~~~~~~P~t~~gKi~ 544 (579)
T PLN03102 523 FMCPRKVVFLQELPKNGNGKIL 544 (579)
T ss_pred ccCCeEEEEcccCCCCCccccc
Confidence 9999999999999999999999
No 34
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.57 E-value=5.8e-15 Score=126.62 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=72.3
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE---ecCCHHHHHHHHhccccccCCCCCCceeEEEEecccC
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL---KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKNWT 77 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A---~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~lP 77 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.++++++|++ .|++|++|+.+.+++++|
T Consensus 389 ~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~v~~iP 463 (487)
T PRK07638 389 FGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKGSATKQQLKSFCLQ-----RLSSFKIPKEWHFVDEIP 463 (487)
T ss_pred eCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEECCCCHHHHHHHHHH-----HhhcccCCcEEEEecccC
Confidence 4799999999999999999999999999998765555433 45778899999999 999999999999999999
Q ss_pred CCCCCccc
Q psy8228 78 LVDVFKTQ 85 (149)
Q Consensus 78 ~T~tGKi~ 85 (149)
+|++||++
T Consensus 464 ~t~~GKv~ 471 (487)
T PRK07638 464 YTNSGKIA 471 (487)
T ss_pred CCCccccc
Confidence 99999999
No 35
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.57 E-value=6.3e-15 Score=129.54 Aligned_cols=88 Identities=17% Similarity=0.036 Sum_probs=75.8
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----e--cCC---HHHHHHHHhccccccCCCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----K--KIK---LFQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~--~~~---~~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
++|+||+|.|||++|.+||+|.+|+|+|++++..++..++ . ..+ .++|..+|++ +|+.|++|+.+
T Consensus 460 ~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i 534 (570)
T PRK04319 460 TSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKK-----GLGAHAAPREI 534 (570)
T ss_pred ECCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHH-----hcccccCCcEE
Confidence 4799999999999999999999999999998776655433 1 112 2578889988 99999999999
Q ss_pred EEecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 71 WLWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
.++++||+|++||++ |+.|++..
T Consensus 535 ~~v~~iP~t~~GKv~--------------------r~~L~~~~ 557 (570)
T PRK04319 535 EFKDKLPKTRSGKIM--------------------RRVLKAWE 557 (570)
T ss_pred EEeCCCCCCCchhhh--------------------HHHHHHHH
Confidence 999999999999999 99998864
No 36
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.57 E-value=9.7e-15 Score=124.55 Aligned_cols=79 Identities=22% Similarity=0.228 Sum_probs=71.1
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.++++++|++ +|++|++|+.+.+++
T Consensus 400 ~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~~~~v~ 474 (496)
T PRK06839 400 GGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHCRL-----FLAKYKIPKEIVFLK 474 (496)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHh-----hCcCCCCCcEEEEec
Confidence 699999999999999999999999999998776554333 23567899999999 999999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 475 ~~P~t~~GKi~ 485 (496)
T PRK06839 475 ELPKNATGKIQ 485 (496)
T ss_pred cCCCCcccccc
Confidence 99999999999
No 37
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.57 E-value=7.2e-15 Score=128.52 Aligned_cols=80 Identities=21% Similarity=0.152 Sum_probs=71.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|+||+|.|||++|.+||+|.+|+|+|++++..+++.++ ...+.++++++|++ +|+.|++|+.++++
T Consensus 444 ~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~-----~l~~~~~P~~i~~v 518 (537)
T PRK13382 444 SGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQHVRD-----NLANYKVPRDIVVL 518 (537)
T ss_pred ECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHHHHHH-----hccCCCCCcEEEEe
Confidence 4799999999999999999999999999998765554333 23567899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 519 ~~lP~t~~gK~~ 530 (537)
T PRK13382 519 DELPRGATGKIL 530 (537)
T ss_pred ccCCCCCCCCCc
Confidence 999999999999
No 38
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.56 E-value=6.5e-15 Score=126.73 Aligned_cols=80 Identities=18% Similarity=0.127 Sum_probs=69.1
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----e--cCC---HHHHHHHHhccccccCCCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----K--KIK---LFQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~--~~~---~~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
.+|+||+|.|||++|.+||+|.||+|+|++++..+++.++ . ..+ .++|.++|+. +|+.|++|..+
T Consensus 407 ~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~~ 481 (501)
T PRK13390 407 SGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDYTRS-----RIAHYKAPRSV 481 (501)
T ss_pred ECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHHHHH-----hcccCCCCcEE
Confidence 3799999999999999999999999999998776555333 1 112 3578899998 99999999999
Q ss_pred EEecccCCCCCCccc
Q psy8228 71 WLWKNWTLVDVFKTQ 85 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~ 85 (149)
++++++|+|++||++
T Consensus 482 ~~~~~iP~t~~GKi~ 496 (501)
T PRK13390 482 EFVDELPRTPTGKLV 496 (501)
T ss_pred EEeccCCCCCcccee
Confidence 999999999999999
No 39
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.56 E-value=1.2e-14 Score=122.90 Aligned_cols=80 Identities=19% Similarity=0.099 Sum_probs=72.2
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecCCHHHHHHHHhccccccCCCCCCceeEEEEecc
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKN 75 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~ 75 (149)
.+|+||+|.|||++|.+||+|.+|+|++++++..++...+ ...+.++++++|++ +|+.|++|..++++++
T Consensus 319 ~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~l~~-----~l~~~~~P~~i~~v~~ 393 (414)
T PRK08308 319 VSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEEIDPVQLREWCIQ-----HLAPYQVPHEIESVTE 393 (414)
T ss_pred ECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCCHHHHHHHHHH-----hCccccCCcEEEEecc
Confidence 3799999999999999999999999999998765555333 45788999999999 9999999999999999
Q ss_pred cCCCCCCccc
Q psy8228 76 WTLVDVFKTQ 85 (149)
Q Consensus 76 lP~T~tGKi~ 85 (149)
+|+|++||++
T Consensus 394 iP~t~~GKi~ 403 (414)
T PRK08308 394 IPKNANGKVS 403 (414)
T ss_pred CCCCCCcCee
Confidence 9999999999
No 40
>KOG1175|consensus
Probab=99.56 E-value=5.1e-15 Score=135.00 Aligned_cols=89 Identities=15% Similarity=0.128 Sum_probs=76.2
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE------ecCCH----HHHHHHHhccccccCCCCCCceeEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL------KKIKL----FQVFTSMKRQQCIRAFLTYKFIMAIW 71 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A------~~~~~----~~L~~~l~~~~~~~~L~~ykvP~~v~ 71 (149)
+|.++++.|||++|.+||.|+|+||||+||+..++.+.| ...+. .+|..++|. .+++|+.|+.|.
T Consensus 504 sGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~-----~igp~a~P~~I~ 578 (626)
T KOG1175|consen 504 SGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRS-----VIGPYAVPRLIV 578 (626)
T ss_pred cceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHh-----hcCcccccceeE
Confidence 699999999999999999999999999999886655544 22333 467777777 999999999999
Q ss_pred EecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCC
Q psy8228 72 LWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFN 115 (149)
Q Consensus 72 ~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~ 115 (149)
++++||+|.|||+. |+.||+-.-+
T Consensus 579 ~v~~LPkTrSGKim--------------------Rr~lrki~~g 602 (626)
T KOG1175|consen 579 FVPGLPKTRSGKIM--------------------RRALRKIASG 602 (626)
T ss_pred ecCCCCccccchhH--------------------HHHHHHHhcc
Confidence 99999999999999 9999986433
No 41
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.56 E-value=1.3e-14 Score=129.19 Aligned_cols=86 Identities=15% Similarity=0.203 Sum_probs=74.4
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE----e---cCC--------HHHHHHHHhccccccCCCCCCc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL----K---KIK--------LFQVFTSMKRQQCIRAFLTYKF 66 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A----~---~~~--------~~~L~~~l~~~~~~~~L~~ykv 66 (149)
+|+||+|.|||++|.+||+|.||+|+|++|+..++..++ . ..+ .++|+++|++ +|++|++
T Consensus 502 ~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~-----~l~~~~~ 576 (629)
T PRK10524 502 AGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDS-----QLGAVAR 576 (629)
T ss_pred CCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHh-----hcCCCcC
Confidence 699999999999999999999999999998765554333 1 111 3578889988 9999999
Q ss_pred eeEEEEecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 67 IMAIWLWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 67 P~~v~~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
|..|.++++||+|++||++ |+.|++.
T Consensus 577 P~~i~~v~~lP~T~sGKi~--------------------R~~L~~~ 602 (629)
T PRK10524 577 PARVWFVSALPKTRSGKLL--------------------RRAIQAI 602 (629)
T ss_pred CCEEEEcCCCCCCCCcchH--------------------HHHHHHH
Confidence 9999999999999999999 9999976
No 42
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.55 E-value=1.3e-14 Score=126.21 Aligned_cols=79 Identities=13% Similarity=0.113 Sum_probs=70.9
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|++|+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.++|.++|++ +||+|++|+.+.+++
T Consensus 437 ~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~~~~~i~~~~~~-----~l~~~~~P~~i~~v~ 511 (534)
T PRK05852 437 GGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPPTAEELVQFCRE-----RLAAFEIPASFQEAS 511 (534)
T ss_pred CCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCCCHHHHHHHHHH-----hcccccCCeEEEEhh
Confidence 699999999999999999999999999998765554333 23678999999999 999999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 512 ~iP~t~~GKi~ 522 (534)
T PRK05852 512 GLPHTAKGSLD 522 (534)
T ss_pred hcCCCCCcccc
Confidence 99999999999
No 43
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.55 E-value=2.1e-14 Score=126.32 Aligned_cols=80 Identities=25% Similarity=0.306 Sum_probs=67.5
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----e----------------cCCHHHHHHHHhccccccC
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----K----------------KIKLFQVFTSMKRQQCIRA 60 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~----------------~~~~~~L~~~l~~~~~~~~ 60 (149)
+|+||+|.|||++|.+||+|.+|+|+|++++..++..+| . ..+.++|..+|++ .+
T Consensus 443 ~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~ 518 (563)
T PLN02860 443 GGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCRE----KN 518 (563)
T ss_pred CCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhh----Cc
Confidence 799999999999999999999999999998766555433 1 2456788999986 14
Q ss_pred CCCCCceeEEEEe-cccCCCCCCccc
Q psy8228 61 FLTYKFIMAIWLW-KNWTLVDVFKTQ 85 (149)
Q Consensus 61 L~~ykvP~~v~~v-d~lP~T~tGKi~ 85 (149)
|++|++|+.+.++ ++||+|++||++
T Consensus 519 L~~~~~P~~~~~~~~~lP~t~~GKi~ 544 (563)
T PLN02860 519 LSRFKIPKLFVQWRKPFPLTTTGKIR 544 (563)
T ss_pred ccccccceEEEEEecCCCCCcccchh
Confidence 9999999998765 679999999999
No 44
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.55 E-value=2.8e-14 Score=125.61 Aligned_cols=88 Identities=10% Similarity=0.049 Sum_probs=77.1
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE----------ecCCHHHHHHHHhccccccCCCCCCceeEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL----------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIW 71 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A----------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~ 71 (149)
+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ .+.+.++|+++|++ +|++|++|+.+.
T Consensus 459 ~G~~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~-----~L~~~~~P~~i~ 533 (576)
T PRK05620 459 GGEWIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRD-----RLPNWMLPEYWT 533 (576)
T ss_pred CCEEEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHh-----hCccccCCeEEE
Confidence 799999999999999999999999999998776555332 12356899999999 999999999999
Q ss_pred EecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCC
Q psy8228 72 LWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGF 114 (149)
Q Consensus 72 ~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~ 114 (149)
+++++|+|++||++ |+.|++.--
T Consensus 534 ~v~~~P~t~~GKv~--------------------r~~L~~~~~ 556 (576)
T PRK05620 534 FVDEIDKTSVGKFD--------------------KKDLRQHLA 556 (576)
T ss_pred EeccCCCCCcccCc--------------------HHHHHHHHh
Confidence 99999999999999 999987743
No 45
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.55 E-value=1.9e-14 Score=123.42 Aligned_cols=87 Identities=18% Similarity=0.135 Sum_probs=77.9
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecCCHHHHHHHHhccccccCCCCCCceeEEEEeccc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKNW 76 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~l 76 (149)
+|+||+|.|||++|.+||.|.+++|+|+++...++..++ ...+.+++.++|++ +|++|++|..+.+++++
T Consensus 380 ~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~l~~~l~~-----~l~~~~~P~~i~~~~~i 454 (471)
T PRK07787 380 GGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADDVAADELIDFVAQ-----QLSVHKRPREVRFVDAL 454 (471)
T ss_pred CCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCCCCCHHHHHHHHHh-----hcccccCCcEEEEeccC
Confidence 799999999999999999999999999998765554333 35688899999999 99999999999999999
Q ss_pred CCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 77 TLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 77 P~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
|+|++||++ |+.|+++|
T Consensus 455 P~~~~GKi~--------------------r~~L~~~~ 471 (471)
T PRK07787 455 PRNAMGKVL--------------------KKQLLSEG 471 (471)
T ss_pred CCCCCcccc--------------------HHHhccCC
Confidence 999999999 99998875
No 46
>PLN02246 4-coumarate--CoA ligase
Probab=99.54 E-value=2.2e-14 Score=124.85 Aligned_cols=79 Identities=20% Similarity=0.190 Sum_probs=70.6
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.+||+|.+|+|+|+++...++..++ ...+.++|+++|++ +|+.|++|..+.+++
T Consensus 441 ~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-----~l~~~~~p~~i~~~~ 515 (537)
T PLN02246 441 KGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGSEITEDEIKQFVAK-----QVVFYKRIHKVFFVD 515 (537)
T ss_pred CCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCCCCCHHHHHHHHHh-----hCcCccccceEEEec
Confidence 699999999999999999999999999998765544332 24567899999999 999999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 516 ~~P~t~~GKi~ 526 (537)
T PLN02246 516 SIPKAPSGKIL 526 (537)
T ss_pred cCCCCCcchhh
Confidence 99999999999
No 47
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.54 E-value=1.8e-14 Score=132.46 Aligned_cols=83 Identities=14% Similarity=0.095 Sum_probs=68.1
Q ss_pred CeEEechHHHHHHHh-cCCCcccEEEEEEEcCCCC-eeEEE----e-----cCCHHHHHHHHhccccccCCCCCCceeEE
Q psy8228 2 RGENVATSEVEDALS-KIVQLKDAAVYGVETSALN-TLGVL----K-----KIKLFQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 2 gGenVsp~EVE~vL~-~hP~V~eaaVvGVpd~~~~-~~~~A----~-----~~~~~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
+|+||+|.|||++|. .||+|.||+|+|+||+..+ +..++ . .++.++|++++++ .++.+|+++.+|+.|
T Consensus 618 ~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~-~i~~~l~~~~~p~~i 696 (728)
T PLN03052 618 GGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNS-AIQKKLNPLFKVSAV 696 (728)
T ss_pred CCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHH-HHHhhcCCccCCCEE
Confidence 799999999999995 8999999999999997655 33333 2 2456777777654 233389999999999
Q ss_pred EEecccCCCCCCccc
Q psy8228 71 WLWKNWTLVDVFKTQ 85 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~ 85 (149)
.++++||+|.|||++
T Consensus 697 ~~v~~lP~T~sGKi~ 711 (728)
T PLN03052 697 VIVPSFPRTASNKVM 711 (728)
T ss_pred EEcCCCCCCCchHHH
Confidence 999999999999999
No 48
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.54 E-value=2.4e-14 Score=122.62 Aligned_cols=88 Identities=25% Similarity=0.234 Sum_probs=77.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.++|+|.+|+|+|++++..++...+ ...+.++++++|++ +|+.|++|+.+.++
T Consensus 436 ~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-----~l~~~~~P~~i~~~ 510 (533)
T PRK07798 436 TGGEKVFPEEVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGARPDLAELRAHCRS-----SLAGYKVPRAIWFV 510 (533)
T ss_pred cCCEEeCHHHHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCCCCHHHHHHHHhh-----hcccCCCCeEEEEc
Confidence 4799999999999999999999999999998765544322 24678999999999 99999999999999
Q ss_pred cccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 74 KNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 74 d~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
+++|+|++||++ |+.|++..
T Consensus 511 ~~iP~t~~GK~~--------------------~~~~~~~~ 530 (533)
T PRK07798 511 DEVQRSPAGKAD--------------------YRWAKEQA 530 (533)
T ss_pred ccCCCCCcchhh--------------------HHHHhhhh
Confidence 999999999999 99999874
No 49
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.53 E-value=2e-14 Score=125.48 Aligned_cols=88 Identities=19% Similarity=0.164 Sum_probs=77.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
.+|+||+|.|||++|..||+|.+|+|+|+++...++..++ ...+.++++++|++ +|++|++|+.+.+++
T Consensus 465 ~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~v~~v~ 539 (560)
T PRK08751 465 VSGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKKDPALTAEDVKAHARA-----NLTGYKQPRIIEFRK 539 (560)
T ss_pred ECCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcCCCCCCHHHHHHHHHH-----hhhhccCCeEEEEhh
Confidence 3799999999999999999999999999998765544333 34577899999999 999999999999999
Q ss_pred ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 75 NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 75 ~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
+||+|++||++ |+.|++.+
T Consensus 540 ~lP~t~~gKv~--------------------r~~L~~~~ 558 (560)
T PRK08751 540 ELPKTNVGKIL--------------------RRELRDAA 558 (560)
T ss_pred hCCCCcccccc--------------------HHHHHHhh
Confidence 99999999999 99998874
No 50
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.53 E-value=2.4e-14 Score=129.55 Aligned_cols=80 Identities=18% Similarity=0.052 Sum_probs=68.3
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCH---HHHHHHHhccccccCCCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKL---FQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~---~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ ...+. +++.++|++ +||.|++|..+
T Consensus 393 ~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~-----~L~~~~~P~~i 467 (705)
T PRK06060 393 IGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLN-----RLSAFKVPHRF 467 (705)
T ss_pred ECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHH-----hCCCCcCCcEE
Confidence 3799999999999999999999999999998765444333 12232 478888988 99999999999
Q ss_pred EEecccCCCCCCccc
Q psy8228 71 WLWKNWTLVDVFKTQ 85 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~ 85 (149)
.++++||+|++||++
T Consensus 468 ~~v~~iP~t~~GKid 482 (705)
T PRK06060 468 AVVDRLPRTPNGKLV 482 (705)
T ss_pred EEeecCCCCcchhhH
Confidence 999999999999999
No 51
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.53 E-value=2.5e-14 Score=125.00 Aligned_cols=79 Identities=10% Similarity=0.075 Sum_probs=70.5
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.+||+|.+++|+|++++..++..++ ...+.++++++|++ +|++|++|+.+++++
T Consensus 438 ~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i~~v~ 512 (539)
T PRK07008 438 GGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVVKRPGAEVTREELLAFYEG-----KVAKWWIPDDVVFVD 512 (539)
T ss_pred CCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEEeCCCCccCHHHHHHHHHh-----hcccccCCeEEEEec
Confidence 799999999999999999999999999998765554322 23567899999999 999999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 513 ~lP~t~sgKi~ 523 (539)
T PRK07008 513 AIPHTATGKLQ 523 (539)
T ss_pred CCCCCCcccee
Confidence 99999999999
No 52
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.53 E-value=2.6e-14 Score=124.11 Aligned_cols=80 Identities=21% Similarity=0.233 Sum_probs=71.2
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE------ecCCHHHHHHHHhccccccC-CCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL------KKIKLFQVFTSMKRQQCIRA-FLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A------~~~~~~~L~~~l~~~~~~~~-L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|+|+++...++..++ ...+.++|+++|++ + |+.|++|..+.++
T Consensus 436 ~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~~~~~~~l~~~l~~-----~~l~~~~~P~~i~~v 510 (527)
T TIGR02275 436 RGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDPALKAAQLRRFLRE-----RGLAEYKLPDRVEFI 510 (527)
T ss_pred cCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCCCCCHHHHHHHHHh-----CCCccccCCCEEEEe
Confidence 3799999999999999999999999999998766655333 34678899999987 5 9999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 511 ~~iP~t~sGKv~ 522 (527)
T TIGR02275 511 DSLPLTAVGKID 522 (527)
T ss_pred ccCCCCCcccee
Confidence 999999999999
No 53
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.52 E-value=2.7e-14 Score=125.01 Aligned_cols=90 Identities=16% Similarity=0.066 Sum_probs=78.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.+++++++++ +|+.|++|+.+.++
T Consensus 459 ~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~~~~v 533 (563)
T PRK06710 459 ASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTECSEEELNQFARK-----YLAAYKVPKVYEFR 533 (563)
T ss_pred ECCEEECHHHHHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCCCCHHHHHHHHHH-----hcccccCCcEEEEc
Confidence 3799999999999999999999999999998765544333 24578899999999 99999999999999
Q ss_pred cccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCC
Q psy8228 74 KNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFN 115 (149)
Q Consensus 74 d~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~ 115 (149)
+++|+|++||++ |+.|+++...
T Consensus 534 ~~iP~t~~GKi~--------------------r~~L~~~~~~ 555 (563)
T PRK06710 534 DELPKTTVGKIL--------------------RRVLIEEEKR 555 (563)
T ss_pred ccCCCCccchhh--------------------HHHHHHHHhh
Confidence 999999999999 8888887543
No 54
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.52 E-value=3.9e-14 Score=121.32 Aligned_cols=80 Identities=20% Similarity=0.196 Sum_probs=71.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|+||+|.|||++|.+||+|.+++|+|++++..++...+ ...+.++|.++|++ +|++|++|..+.++
T Consensus 401 ~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~v 475 (497)
T PRK06145 401 SGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQ-----RLASFKVPRQLKVR 475 (497)
T ss_pred eCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHH-----hhhcCCCCCEEEEe
Confidence 4799999999999999999999999999998766655332 23577899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 476 ~~iP~t~~GKi~ 487 (497)
T PRK06145 476 DELPRNPSGKVL 487 (497)
T ss_pred ccCCCCCccccc
Confidence 999999999999
No 55
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.52 E-value=3.4e-14 Score=124.02 Aligned_cols=88 Identities=14% Similarity=0.092 Sum_probs=77.9
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..+++..+ ...+.+++.++|++ +|+.|++|+.+.++
T Consensus 438 ~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i~~v 512 (542)
T PRK06018 438 SGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLLIVQLKPGETATREEILKYMDG-----KIAKWWMPDDVAFV 512 (542)
T ss_pred ECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeEEEEEeCCCCCCCHHHHHHHHHh-----hCccccCCcEEEEe
Confidence 3799999999999999999999999999998765555322 34577899999999 99999999999999
Q ss_pred cccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 74 KNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 74 d~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
+++|+|++||++ |+.|++.-
T Consensus 513 ~~iP~t~~GKi~--------------------r~~L~~~~ 532 (542)
T PRK06018 513 DAIPHTATGKIL--------------------KTALREQF 532 (542)
T ss_pred ccCCCCCcchhh--------------------HHHHHHHH
Confidence 999999999999 99998873
No 56
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.52 E-value=4.3e-14 Score=121.08 Aligned_cols=80 Identities=23% Similarity=0.288 Sum_probs=70.3
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|+||+|.|||++|.+||+|.+++|+|++++..++..++ ...+.+++.++|++ +|++|++|+.++++
T Consensus 389 ~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~~ 463 (488)
T PRK09088 389 SGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLST-----RLAKYKVPKHLRLV 463 (488)
T ss_pred eCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHh-----hCcCCCCCCEEEEc
Confidence 3799999999999999999999999999998655443332 23467899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
++||+|++||++
T Consensus 464 ~~iP~t~~gKi~ 475 (488)
T PRK09088 464 DALPRTASGKLQ 475 (488)
T ss_pred ccCCCCCCCcee
Confidence 999999999999
No 57
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.52 E-value=4.2e-14 Score=122.44 Aligned_cols=80 Identities=20% Similarity=0.299 Sum_probs=71.4
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|+||+|.|||++|.++|+|.+|+|+|++++..++..++ ...+.++++++|++ .|++|++|..+.++
T Consensus 422 ~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~l~~~~~P~~~~~~ 496 (528)
T PRK07470 422 SGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPVDEAELLAWLDG-----KVARYKLPKRFFFW 496 (528)
T ss_pred eCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCCCCHHHHHHHHHH-----hhhcCCCCcEEEEe
Confidence 4799999999999999999999999999998765544333 23678899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 497 ~~iP~t~~GKi~ 508 (528)
T PRK07470 497 DALPKSGYGKIT 508 (528)
T ss_pred ccCCCCCccccc
Confidence 999999999999
No 58
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.52 E-value=5.9e-14 Score=121.85 Aligned_cols=80 Identities=19% Similarity=0.153 Sum_probs=70.8
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|++|+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.++++.+|++ +|+.|++|..+.++
T Consensus 456 ~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~-----~L~~~~~P~~i~~v 530 (558)
T PRK12583 456 RGGENIYPREIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAASEEELREFCKA-----RIAHFKVPRYFRFV 530 (558)
T ss_pred ECCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCCCCHHHHHHHHHh-----hcccCcCCcEEEEe
Confidence 4799999999999999999999999999998765444333 23568899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 531 ~~lP~t~sGK~~ 542 (558)
T PRK12583 531 DEFPMTVTGKVQ 542 (558)
T ss_pred ccCCCCCCCCcc
Confidence 999999999999
No 59
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.51 E-value=3.4e-14 Score=122.47 Aligned_cols=79 Identities=18% Similarity=0.178 Sum_probs=70.7
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||.+|.+||.|.+|+|+|++++..+++..+ ...+.++++++|++ +|++|++|..+.+++
T Consensus 427 ~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~~~~v~ 501 (517)
T PRK08008 427 GGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFAFCEQ-----NMAKFKVPSYLEIRK 501 (517)
T ss_pred CCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCCCCHHHHHHHHHh-----hcccccCCcEEEEec
Confidence 699999999999999999999999999998765554322 24567899999999 999999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 502 ~iP~t~~gK~~ 512 (517)
T PRK08008 502 DLPRNCSGKII 512 (517)
T ss_pred cCCCCCcccee
Confidence 99999999999
No 60
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.51 E-value=3.5e-14 Score=124.79 Aligned_cols=78 Identities=14% Similarity=0.012 Sum_probs=66.5
Q ss_pred CCeEEechHHHHHHHhcCCCccc------EEEEEEEcCCCCeeEEE---ecCCHHHHHHHHhccccccC-CCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKD------AAVYGVETSALNTLGVL---KKIKLFQVFTSMKRQQCIRA-FLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~e------aaVvGVpd~~~~~~~~A---~~~~~~~L~~~l~~~~~~~~-L~~ykvP~~v 70 (149)
.+|+||+|.|||++|.+||+|.+ |+|+|+|+.. ...++ ...+.+++.++|++ + |+.|++|+.+
T Consensus 438 ~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~P~~i 510 (539)
T PRK06334 438 IGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEK--VRLCLFTTFPTSISEVNDILKN-----SKTSSILKISYH 510 (539)
T ss_pred ECCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCc--eEEEEEEeccCChHHHHHHHHh-----cCCcccccchhe
Confidence 37999999999999999999998 8899998532 22332 34577899999988 5 7999999999
Q ss_pred EEecccCCCCCCccc
Q psy8228 71 WLWKNWTLVDVFKTQ 85 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~ 85 (149)
.++++||+|++||++
T Consensus 511 ~~v~~lP~t~~GKi~ 525 (539)
T PRK06334 511 HQVESIPMLGTGKPD 525 (539)
T ss_pred eeecccccccCCccc
Confidence 999999999999999
No 61
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.51 E-value=6e-14 Score=132.38 Aligned_cols=81 Identities=12% Similarity=0.031 Sum_probs=71.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE----ecCCHHHHHHHHhccccccCCCCCCceeEEEEeccc
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL----KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKNW 76 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A----~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~l 76 (149)
.+|+||+|.|||++|.+||+|.+|+|+++||+..+++.++ .+.+.+++.+++++ .+|++|++|+.+++++++
T Consensus 1038 ~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~----~~l~~~~~P~~i~~v~~l 1113 (1140)
T PRK06814 1038 IAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTTASDATRAAFLAHAKA----AGASELMVPAEIITIDEI 1113 (1140)
T ss_pred eCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEcCCCcCHHHHHHHHHH----cCCCcccCCcEEEEecCc
Confidence 3799999999999999999999999999998776655333 45678899999986 159999999999999999
Q ss_pred CCCCCCccc
Q psy8228 77 TLVDVFKTQ 85 (149)
Q Consensus 77 P~T~tGKi~ 85 (149)
|+|++||++
T Consensus 1114 P~t~~GKi~ 1122 (1140)
T PRK06814 1114 PLLGTGKID 1122 (1140)
T ss_pred CCCCCCCCc
Confidence 999999999
No 62
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.50 E-value=8e-14 Score=121.80 Aligned_cols=80 Identities=18% Similarity=0.128 Sum_probs=70.9
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|+|+++...++..++ ...+.++|+++|+. +|+.|++|+.+.++
T Consensus 445 ~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~~~~v 519 (546)
T PLN02330 445 YKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAKESEEDILNFVAA-----NVAHYKKVRVVQFV 519 (546)
T ss_pred cCCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEECCCCCCCHHHHHHHHHH-----hcccccCceEEEEe
Confidence 3799999999999999999999999999998765554332 23567889999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 520 ~~iP~t~~GK~~ 531 (546)
T PLN02330 520 DSIPKSLSGKIM 531 (546)
T ss_pred ccCCCCCCccee
Confidence 999999999999
No 63
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.49 E-value=1.2e-13 Score=120.70 Aligned_cols=81 Identities=14% Similarity=0.118 Sum_probs=70.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.+++.+++++ ..|+.|++|..+.++
T Consensus 447 ~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~----~~l~~~~~P~~i~~v 522 (547)
T PRK13295 447 RGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQSLDFEEMVEFLKA----QKVAKQYIPERLVVR 522 (547)
T ss_pred ECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCCCCHHHHHHHHHh----ccCccccCCcEEEEe
Confidence 3799999999999999999999999999998776655333 23567889999985 169999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
++||+|++||++
T Consensus 523 ~~lP~t~sgK~~ 534 (547)
T PRK13295 523 DALPRTPSGKIQ 534 (547)
T ss_pred ccCCCCCCcccc
Confidence 999999999999
No 64
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.49 E-value=5.4e-14 Score=123.10 Aligned_cols=96 Identities=15% Similarity=0.137 Sum_probs=73.4
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecCC---HHHHHHHHhccccccCCCCCCceeEEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKIK---LFQVFTSMKRQQCIRAFLTYKFIMAIWL 72 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~~---~~~L~~~l~~~~~~~~L~~ykvP~~v~~ 72 (149)
.+|+||+|.|||++|..||+|.+|+|+|+++...++..++ ...+ .+++.+++.. .++.+|++|++|+.+.+
T Consensus 430 ~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~-~~~~~l~~~~~P~~v~~ 508 (540)
T PRK05857 430 CGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARALKHTIAA-RFRRESEPMARPSTIVI 508 (540)
T ss_pred cCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHHHHHHHHH-HHHhhhccccCCeEEEE
Confidence 4799999999999999999999999999998665444332 1222 2334444432 12228999999999999
Q ss_pred ecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCC
Q psy8228 73 WKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNEN 117 (149)
Q Consensus 73 vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~ 117 (149)
++++|+|++||++ |+.|+++.-.++
T Consensus 509 ~~~iP~t~~GKi~--------------------r~~l~~~~~~~~ 533 (540)
T PRK05857 509 VTDIPRTQSGKVM--------------------RASLAAAATADK 533 (540)
T ss_pred hhcCCCCCCccee--------------------HHHHHHhhhhcc
Confidence 9999999999999 999988844333
No 65
>PRK08315 AMP-binding domain protein; Validated
Probab=99.49 E-value=9.2e-14 Score=120.88 Aligned_cols=80 Identities=20% Similarity=0.179 Sum_probs=70.8
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|+||+|.|||++|.+||+|.+|+|++++++..++..++ ...+.++++++|++ +|+.|++|..++++
T Consensus 455 ~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-----~l~~~~~P~~i~~v 529 (559)
T PRK08315 455 RGGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGATLTEEDVRDFCRG-----KIAHYKIPRYIRFV 529 (559)
T ss_pred ECCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCCCCHHHHHHHHHh-----hcccccCCcEEEEc
Confidence 4799999999999999999999999999998765444332 23577899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 530 ~~lP~t~~GK~~ 541 (559)
T PRK08315 530 DEFPMTVTGKIQ 541 (559)
T ss_pred ccCCCCCCCcee
Confidence 999999999999
No 66
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.49 E-value=4.1e-14 Score=126.18 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=66.4
Q ss_pred CeEEechHHHHHHHhc-CCCccc--EEEEEEEc-------------------CCCCeeEEE--------ecCCHHHHHHH
Q psy8228 2 RGENVATSEVEDALSK-IVQLKD--AAVYGVET-------------------SALNTLGVL--------KKIKLFQVFTS 51 (149)
Q Consensus 2 gGenVsp~EVE~vL~~-hP~V~e--aaVvGVpd-------------------~~~~~~~~A--------~~~~~~~L~~~ 51 (149)
+|+||+|.|||++|.+ ||+|.+ |+|+|+|| +.+++.+++ ...+.++|.++
T Consensus 492 ~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~~~~~~l~~~ 571 (631)
T PRK07769 492 DGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHKLDPQPIADD 571 (631)
T ss_pred CCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCccccccHHHHHHH
Confidence 7999999999999996 899998 99999998 334444433 13577899999
Q ss_pred HhccccccCCCC-CC-ceeEEEEec--ccCCCCCCccc
Q psy8228 52 MKRQQCIRAFLT-YK-FIMAIWLWK--NWTLVDVFKTQ 85 (149)
Q Consensus 52 l~~~~~~~~L~~-yk-vP~~v~~vd--~lP~T~tGKi~ 85 (149)
|++ +|+. |+ .|+.+.+++ +||+|++|||+
T Consensus 572 ~~~-----~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~ 604 (631)
T PRK07769 572 IRA-----AIAVRHGVTVRDVLLVPAGSIPRTSSGKIA 604 (631)
T ss_pred HHH-----HHHHHcCCCccEEEEECCCccccCCCcHHH
Confidence 999 8995 67 489999997 69999999999
No 67
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.49 E-value=1.2e-13 Score=121.06 Aligned_cols=80 Identities=20% Similarity=0.135 Sum_probs=71.4
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||.|.+|+|+|++++..++..++ ...+.++|+++|++ +|+.|++|..+.++
T Consensus 473 ~~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~~ 547 (573)
T PRK05605 473 TGGFNVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAALDPEGLRAYCRE-----HLTRYKVPRRFYHV 547 (573)
T ss_pred eCCEEECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCCCCHHHHHHHHHH-----hCccccCCcEEEEe
Confidence 4799999999999999999999999999998765554332 24678999999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|.+||++
T Consensus 548 ~~iP~t~~GKi~ 559 (573)
T PRK05605 548 DELPRDQLGKVR 559 (573)
T ss_pred ccCCCCCccccc
Confidence 999999999999
No 68
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.49 E-value=1.1e-13 Score=120.86 Aligned_cols=80 Identities=19% Similarity=0.217 Sum_probs=71.4
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecCCHHHHHHHHhccccccC-CCCCCceeEEEEec
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKIKLFQVFTSMKRQQCIRA-FLTYKFIMAIWLWK 74 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~~~~~L~~~l~~~~~~~~-L~~ykvP~~v~~vd 74 (149)
++|+||+|.|||++|.+||+|.+++|+++++...++..++ ...+.+++.++|++ . |++|++|..+.+++
T Consensus 437 ~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~l~~~~~~-----~~l~~~~~P~~~~~~~ 511 (536)
T PRK10946 437 RGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEPLKAVQLRRFLRE-----QGIAEFKLPDRVECVD 511 (536)
T ss_pred cCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCCCCHHHHHHHHHh-----CCccccccCcEEEEec
Confidence 4799999999999999999999999999998765555333 34788999999987 5 99999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 512 ~iP~t~~GKv~ 522 (536)
T PRK10946 512 SLPLTAVGKVD 522 (536)
T ss_pred cCCCCCCCccc
Confidence 99999999999
No 69
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.49 E-value=9.1e-14 Score=121.02 Aligned_cols=81 Identities=14% Similarity=0.095 Sum_probs=70.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|+|+++...++..++ ...+.+++.++++. .+|+.|++|..+.++
T Consensus 445 ~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~----~~l~~~~~P~~i~~v 520 (538)
T TIGR03208 445 RGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGCTLDFAAMVAFLKA----QKVALQYIPERLEVV 520 (538)
T ss_pred ECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCCCCCCHHHHHHHHHh----cchhhccCCcEEEEe
Confidence 3799999999999999999999999999998765544333 24678899999984 169999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 521 ~~iP~t~~gKv~ 532 (538)
T TIGR03208 521 DALPATPAGKIQ 532 (538)
T ss_pred ccCCCCCccccc
Confidence 999999999999
No 70
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.48 E-value=1.3e-13 Score=119.37 Aligned_cols=80 Identities=19% Similarity=0.110 Sum_probs=71.0
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|+||+|.|||++|.+||+|.+++|+|++++..++..++ ...+.++++++|++ .|+.|++|..++++
T Consensus 421 ~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~v 495 (524)
T PRK06188 421 TGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAAELQAHVKE-----RKGSVHAPKQVDFV 495 (524)
T ss_pred cCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHHH-----hcccCCCCcEEEEe
Confidence 4799999999999999999999999999998765544332 24567899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 496 ~~~P~t~~gKi~ 507 (524)
T PRK06188 496 DSLPLTALGKPD 507 (524)
T ss_pred cCCCCCcccccc
Confidence 999999999999
No 71
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.48 E-value=1.1e-13 Score=119.52 Aligned_cols=90 Identities=18% Similarity=0.128 Sum_probs=76.8
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----e--c---CCHHHHHHHHhccccccCCCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----K--K---IKLFQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~--~---~~~~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
.+|+||+|.|||++|.+||.|.+|+|+|++++..++..++ . . ...++++++|++ +|+.|++|..+
T Consensus 410 ~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i 484 (511)
T PRK13391 410 SGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELIAFCRQ-----RLSRQKCPRSI 484 (511)
T ss_pred eCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHHHHHHh-----hcccCcCCcEE
Confidence 3799999999999999999999999999998765554332 1 1 124788999998 99999999999
Q ss_pred EEecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCC
Q psy8228 71 WLWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFN 115 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~ 115 (149)
.+++++|+|++||++ |..|++...+
T Consensus 485 ~~~~~~P~t~~gKv~--------------------r~~l~~~~~~ 509 (511)
T PRK13391 485 DFEDELPRLPTGKLY--------------------KRLLRDRYWG 509 (511)
T ss_pred EEeecCCCCCcccee--------------------HHHHHHHhhc
Confidence 999999999999999 9999987543
No 72
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.48 E-value=1.2e-13 Score=119.13 Aligned_cols=89 Identities=18% Similarity=0.208 Sum_probs=77.6
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|+||+|.|||++|.+||+|.+|+|+|+++...++..++ ...+.+++++++++ +|++|++|..+.++
T Consensus 407 ~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-----~l~~~~~P~~i~~~ 481 (509)
T PRK12406 407 SGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIRAQLKA-----RLAGYKVPKHIEIM 481 (509)
T ss_pred ECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCCCCHHHHHHHHHH-----hcccCCCCcEEEEe
Confidence 4799999999999999999999999999998654444332 23578999999999 99999999999999
Q ss_pred cccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCC
Q psy8228 74 KNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGF 114 (149)
Q Consensus 74 d~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~ 114 (149)
+++|+|++||++ |+.|++..+
T Consensus 482 ~~iP~t~~GK~~--------------------r~~L~~~~~ 502 (509)
T PRK12406 482 AELPREDSGKIF--------------------KRRLRDPYW 502 (509)
T ss_pred ccCCCCCccchh--------------------HHHHHHHHH
Confidence 999999999999 999987643
No 73
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.48 E-value=1.5e-13 Score=117.44 Aligned_cols=80 Identities=23% Similarity=0.220 Sum_probs=71.0
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|++|+|.|||++|.+||+|.+++|+|+++...++..++ ...+.+++.++|++ .|++|++|..+.++
T Consensus 420 ~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~v 494 (513)
T PRK07656 420 VGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELTEEELIAYCRE-----HLAKYKVPRSIEFL 494 (513)
T ss_pred eCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCCHHHHHHHHHh-----hcccccCCCEEEEe
Confidence 4799999999999999999999999999998765544332 24578899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 495 ~~iP~t~~gK~~ 506 (513)
T PRK07656 495 DELPKNATGKVL 506 (513)
T ss_pred cCCCCCCcccee
Confidence 999999999999
No 74
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.48 E-value=1.5e-13 Score=120.63 Aligned_cols=80 Identities=23% Similarity=0.196 Sum_probs=70.9
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
++|+||+|.|||++|.+||.|.+|+|+|+++...++...+ ...+.+++.++|++ +|+.|++|..+.+++
T Consensus 469 ~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~~~~-----~l~~~~~P~~i~~~~ 543 (562)
T PRK12492 469 VSGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPGLSVEELKAYCKE-----NFTGYKVPKHIVLRD 543 (562)
T ss_pred ECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCCCHHHHHHHHHH-----hcccccCCcEEEEec
Confidence 3799999999999999999999999999998765544332 23567899999999 999999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 544 ~~P~t~~GK~~ 554 (562)
T PRK12492 544 SLPMTPVGKIL 554 (562)
T ss_pred cCCCCCCCcee
Confidence 99999999999
No 75
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.47 E-value=1.6e-13 Score=120.00 Aligned_cols=79 Identities=19% Similarity=0.112 Sum_probs=70.8
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE------ecCCHHHHHHHHhccccccCCCCCCceeEEEEecc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKN 75 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~ 75 (149)
+|+||+|.|||++|.+||+|.+|+|+|+++...++..++ ...+.++++.+|++ +|+.|++|..++++++
T Consensus 464 ~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i~~v~~ 538 (557)
T PRK07059 464 SGFNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPALTEEDVKAFCKE-----RLTNYKRPKFVEFRTE 538 (557)
T ss_pred CCEEEcHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCCCCHHHHHHHHHH-----hcccccCCcEEEEecc
Confidence 799999999999999999999999999998765544333 24677899999999 9999999999999999
Q ss_pred cCCCCCCccc
Q psy8228 76 WTLVDVFKTQ 85 (149)
Q Consensus 76 lP~T~tGKi~ 85 (149)
+|+|++||++
T Consensus 539 ~P~t~~GK~~ 548 (557)
T PRK07059 539 LPKTNVGKIL 548 (557)
T ss_pred CCCCccccee
Confidence 9999999999
No 76
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.47 E-value=1.3e-13 Score=120.18 Aligned_cols=80 Identities=15% Similarity=0.074 Sum_probs=70.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE--------ecCCHHHHHHHHhccccccCCCCCCceeEEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL--------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWL 72 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A--------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~ 72 (149)
.+|+||+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.+++.+++++ +|++|++|..+++
T Consensus 449 ~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i~~ 523 (541)
T TIGR03205 449 SGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAKPFSLDELRAFLAG-----KLGKHELPVAVEF 523 (541)
T ss_pred ECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEECCCCCcCCHHHHHHHHHh-----hcccccCCcEEEE
Confidence 3799999999999999999999999999998765554333 12567899999999 9999999999999
Q ss_pred ecccCCCCCCccc
Q psy8228 73 WKNWTLVDVFKTQ 85 (149)
Q Consensus 73 vd~lP~T~tGKi~ 85 (149)
++++|+|++||++
T Consensus 524 ~~~iP~t~~gK~~ 536 (541)
T TIGR03205 524 VDELPRTPVGKLS 536 (541)
T ss_pred eccCCCCccccee
Confidence 9999999999999
No 77
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.47 E-value=2e-13 Score=116.93 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=70.8
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|++|+|.|||++|.++|+|.+|+|+|++++..++..++ ...+.+++.++|++ +|++|++|..++++
T Consensus 405 ~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~v 479 (504)
T PRK07514 405 SGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAALKG-----RLARFKQPKRVFFV 479 (504)
T ss_pred eCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHHHh-----hcccCCCCcEEEEe
Confidence 4799999999999999999999999999998665544333 23578899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 480 ~~~p~t~~gK~~ 491 (504)
T PRK07514 480 DELPRNTMGKVQ 491 (504)
T ss_pred ccCCCCCCccee
Confidence 999999999999
No 78
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.47 E-value=1.9e-13 Score=116.47 Aligned_cols=79 Identities=18% Similarity=0.184 Sum_probs=71.0
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecCCHHHHHHHHhccccccCCCCCCceeEEEEeccc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKNW 76 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~l 76 (149)
+|++|+|.|||+++.+||+|.+++|++++++..+...++ ...+.+++.++|++ .|++|++|..+.+++++
T Consensus 389 ~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~~~~i 463 (483)
T PRK03640 389 GGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSGEVTEEELRHFCEE-----KLAKYKVPKRFYFVEEL 463 (483)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCCCCCHHHHHHHHHH-----hccCCCCCcEEEEeCCC
Confidence 799999999999999999999999999988665444322 46788999999999 99999999999999999
Q ss_pred CCCCCCccc
Q psy8228 77 TLVDVFKTQ 85 (149)
Q Consensus 77 P~T~tGKi~ 85 (149)
|+|++||++
T Consensus 464 P~t~~gK~~ 472 (483)
T PRK03640 464 PRNASGKLL 472 (483)
T ss_pred CCCCcccee
Confidence 999999999
No 79
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.47 E-value=2.4e-13 Score=116.44 Aligned_cols=79 Identities=11% Similarity=0.081 Sum_probs=65.4
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCC-eeEEE----e--c-C---C-HHHHHHHHhccccccCCCCCCceeE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALN-TLGVL----K--K-I---K-LFQVFTSMKRQQCIRAFLTYKFIMA 69 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~-~~~~A----~--~-~---~-~~~L~~~l~~~~~~~~L~~ykvP~~ 69 (149)
+|+||+|.|||++|.+||+|.+|+|++++++... +..++ . . . . ..+++.+|++ +|++|++|+.
T Consensus 402 ~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~-----~l~~~~~P~~ 476 (502)
T TIGR01734 402 HGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKK-----SLPAYMIPRK 476 (502)
T ss_pred CcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhh-----hChhhcCCcE
Confidence 7999999999999999999999999998743332 33322 1 1 1 1 2668888988 9999999999
Q ss_pred EEEecccCCCCCCccc
Q psy8228 70 IWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 70 v~~vd~lP~T~tGKi~ 85 (149)
+++++++|+|++||++
T Consensus 477 ~~~v~~lP~t~~gKv~ 492 (502)
T TIGR01734 477 FIYRDQLPLTANGKID 492 (502)
T ss_pred EEEccccCCCCCCccc
Confidence 9999999999999999
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.45 E-value=3.1e-13 Score=126.49 Aligned_cols=81 Identities=17% Similarity=0.062 Sum_probs=70.2
Q ss_pred CCeEEechHHHHHHHhcCC--CcccEEEEEEEcCCCCeeEEE----ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 1 WRGENVATSEVEDALSKIV--QLKDAAVYGVETSALNTLGVL----KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP--~V~eaaVvGVpd~~~~~~~~A----~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
.+|+||+|.|||++|.+|| ++.+|+|+|++|+..+++.++ ...+.+++++++++ .+||+|++|+.+.+++
T Consensus 1047 ~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~l~~~~~~----~~l~~~~~P~~i~~~~ 1122 (1146)
T PRK08633 1047 IGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCGAEDVEELKRAIKE----SGLPNLWKPSRYFKVE 1122 (1146)
T ss_pred hCcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecCccCHHHHHHHHHh----cCCCcccCCcEEEEec
Confidence 3799999999999999999 577899999999877665433 45677889998875 1699999999999999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 1123 ~iP~t~~GKi~ 1133 (1146)
T PRK08633 1123 ALPLLGSGKLD 1133 (1146)
T ss_pred CcCCCCCCCCc
Confidence 99999999999
No 81
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.45 E-value=2.8e-13 Score=116.03 Aligned_cols=80 Identities=19% Similarity=0.144 Sum_probs=71.2
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||+.|.++|+|.+|+|+|++++..+++.++ ...+.+++.++++. +|+.|++|..+.++
T Consensus 423 ~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~v 497 (523)
T PRK08316 423 TGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDELIAHCRA-----RLAGFKVPKRVIFV 497 (523)
T ss_pred eCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCCCCHHHHHHHHHH-----hcccCCCCcEEEEe
Confidence 3799999999999999999999999999998876555333 22567889999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 498 ~~~p~t~~gKi~ 509 (523)
T PRK08316 498 DELPRNPSGKIL 509 (523)
T ss_pred cCCCCCCcccee
Confidence 999999999999
No 82
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.43 E-value=3.7e-13 Score=117.95 Aligned_cols=78 Identities=19% Similarity=0.170 Sum_probs=69.1
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.++|+|.+++|+|++++..++..++ ...+.++|+++|++ +|+.|++|. +.+++
T Consensus 471 ~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~-i~~v~ 544 (567)
T PRK06178 471 NGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGADLTAAALQAWCRE-----NMAVYKVPE-IRIVD 544 (567)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCcCCHHHHHHHHHh-----cCcccCCce-EEEec
Confidence 799999999999999999999999999998765544332 24578899999999 999999997 88999
Q ss_pred ccCCCCCCccc
Q psy8228 75 NWTLVDVFKTQ 85 (149)
Q Consensus 75 ~lP~T~tGKi~ 85 (149)
++|+|++||++
T Consensus 545 ~iP~t~~GKv~ 555 (567)
T PRK06178 545 ALPMTATGKVR 555 (567)
T ss_pred cCCCCCcccee
Confidence 99999999999
No 83
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.43 E-value=4.6e-13 Score=114.24 Aligned_cols=79 Identities=14% Similarity=0.124 Sum_probs=66.5
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE----e--cCCH-----HHHHHHHhccccccCCCCCCceeEE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL----K--KIKL-----FQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A----~--~~~~-----~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
+|+||+|.|||++|.+||+|.+|+|+|+++...++..++ . ..+. ++++++|++ +|+.|++|+.+
T Consensus 404 ~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i 478 (503)
T PRK04813 404 NGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKE-----RLMEYMIPRKF 478 (503)
T ss_pred CcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHh-----hCccccCCeEE
Confidence 699999999999999999999999999887544444333 1 1221 358888888 99999999999
Q ss_pred EEecccCCCCCCccc
Q psy8228 71 WLWKNWTLVDVFKTQ 85 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~ 85 (149)
.+++++|+|++||++
T Consensus 479 ~~~~~~P~t~~gKv~ 493 (503)
T PRK04813 479 IYRDSLPLTPNGKID 493 (503)
T ss_pred EEeccCCCCCCCCCc
Confidence 999999999999999
No 84
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.43 E-value=5e-13 Score=116.67 Aligned_cols=80 Identities=20% Similarity=0.181 Sum_probs=70.1
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE--------ecCCHHHHHHHHhccccccCCCCCCceeEEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL--------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWL 72 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A--------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~ 72 (149)
++|+||+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.+++.++|++ +|++|++|..+.+
T Consensus 427 ~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~-----~l~~~~~P~~i~~ 501 (542)
T PRK07786 427 SGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAALTLEDLAEFLTD-----RLARYKHPKALEI 501 (542)
T ss_pred eCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCCCCHHHHHHHHHh-----hccCCCCCCEEEE
Confidence 4799999999999999999999999999987655444322 12567899999999 9999999999999
Q ss_pred ecccCCCCCCccc
Q psy8228 73 WKNWTLVDVFKTQ 85 (149)
Q Consensus 73 vd~lP~T~tGKi~ 85 (149)
++++|+|++||++
T Consensus 502 v~~iP~t~~GKv~ 514 (542)
T PRK07786 502 VDALPRNPAGKVL 514 (542)
T ss_pred eccCCCCCccccc
Confidence 9999999999999
No 85
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.43 E-value=4.4e-13 Score=117.26 Aligned_cols=88 Identities=18% Similarity=0.157 Sum_probs=77.1
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE------ecCCHHHHHHHHhccccccCCCCCCceeEEEEecc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKN 75 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~ 75 (149)
+|+||+|.|||++|.+||+|.+|+|+|+++...++..++ ...+.++++++|.+ +|++|++|..+.++++
T Consensus 461 ~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~l~~~l~~-----~l~~~~~P~~~~~~~~ 535 (560)
T PRK08974 461 SGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDPSLTEEELITHCRR-----HLTGYKVPKLVEFRDE 535 (560)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCCCCCCHHHHHHHHHh-----hcccccCCcEEEEhhh
Confidence 699999999999999999999999999998765544322 23567889999999 9999999999999999
Q ss_pred cCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCC
Q psy8228 76 WTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGF 114 (149)
Q Consensus 76 lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~ 114 (149)
+|+|++||++ |..|++++.
T Consensus 536 lP~t~~GK~~--------------------r~~l~~~~~ 554 (560)
T PRK08974 536 LPKSNVGKIL--------------------RRELRDEAR 554 (560)
T ss_pred CCCCCCCcEe--------------------HHHHHHHHH
Confidence 9999999999 999988753
No 86
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.42 E-value=3.1e-13 Score=113.54 Aligned_cols=80 Identities=18% Similarity=0.165 Sum_probs=70.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecCCHHHHHHHHhccccccCCCCCCceeEEEEecc
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWKN 75 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd~ 75 (149)
++|++|+|.|||++|.+||+|.+|+|+++++...+...++ ...+.+++.++|++ .|+.|++|..++++++
T Consensus 348 ~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~l~~-----~l~~~~~p~~i~~~~~ 422 (436)
T TIGR01923 348 SGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESDISQAKLIAYLTE-----KLAKYKVPIAFEKLDE 422 (436)
T ss_pred eCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCCCCHHHHHHHHHH-----hhhCCCCCeEEEEecC
Confidence 4799999999999999999999999999987654443333 34678899999999 9999999999999999
Q ss_pred cCCCCCCccc
Q psy8228 76 WTLVDVFKTQ 85 (149)
Q Consensus 76 lP~T~tGKi~ 85 (149)
||+|++||++
T Consensus 423 iP~t~~GK~~ 432 (436)
T TIGR01923 423 LPYNASGKIL 432 (436)
T ss_pred CCCCCCCcee
Confidence 9999999999
No 87
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.42 E-value=8.1e-13 Score=115.12 Aligned_cols=80 Identities=25% Similarity=0.307 Sum_probs=69.1
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE--------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL--------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A--------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
+|++|+|.|||++|.++|+|.+++|+|++++..+++.++ ...+.+++.+++.. ..|++|++|..+.++
T Consensus 439 ~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~l~~~~~P~~i~~v 514 (547)
T PRK06087 439 GGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLTLEEVVAFFSR----KRVAKYKYPEHIVVI 514 (547)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCCCCCHHHHHHHHHh----ccccccCCCeEEEEe
Confidence 699999999999999999999999999998776655333 12467888888753 179999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
++||+|++||++
T Consensus 515 ~~iP~t~sGK~~ 526 (547)
T PRK06087 515 DKLPRTASGKIQ 526 (547)
T ss_pred ccCCCCCCCcCc
Confidence 999999999999
No 88
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.42 E-value=6.3e-13 Score=115.23 Aligned_cols=80 Identities=21% Similarity=0.123 Sum_probs=70.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+++|+|+++...++...+ ...+.++++.+|++ +|+.|++|..+.++
T Consensus 424 ~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~p~~i~~v 498 (516)
T PRK13383 424 SGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYLKD-----RVSRFEQPRDINIV 498 (516)
T ss_pred ECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHH-----hcccCCCCcEEEEe
Confidence 3799999999999999999999999999998765554322 24567899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 499 ~~iP~t~~gKi~ 510 (516)
T PRK13383 499 SSIPRNPTGKVL 510 (516)
T ss_pred CCCCCCCCCcCc
Confidence 999999999999
No 89
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.41 E-value=4.8e-13 Score=114.96 Aligned_cols=90 Identities=17% Similarity=0.141 Sum_probs=76.0
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----e--cCCH---HHHHHHHhccccccCCCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----K--KIKL---FQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~--~~~~---~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
.+|+||+|.|||.+|.+||+|.+|+|+|++++..++...+ . ..+. +++..+|++ +|+.|++|+.+
T Consensus 397 ~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~-----~l~~~~~p~~i 471 (502)
T PRK08276 397 SGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRG-----RLAHYKCPRSI 471 (502)
T ss_pred eCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHh-----hccCCCCCcEE
Confidence 3799999999999999999999999999998765554333 1 1222 378889988 99999999999
Q ss_pred EEecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCC
Q psy8228 71 WLWKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFN 115 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~ 115 (149)
.+++++|+|++||++ |+.|++..++
T Consensus 472 ~~~~~lP~t~~GKi~--------------------r~~L~~~~~~ 496 (502)
T PRK08276 472 DFEDELPRTPTGKLY--------------------KRRLRDRYWE 496 (502)
T ss_pred EEecCCCCCcccchh--------------------HHHHHHHHHh
Confidence 999999999999999 9999988443
No 90
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.41 E-value=8.8e-13 Score=114.63 Aligned_cols=79 Identities=19% Similarity=0.158 Sum_probs=68.6
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
++|++|+|.|||++|.+||+|.+|+|+|++++..++..++ ...+.++++++|++ .|++|++|..+.+
T Consensus 444 ~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~~~~- 517 (545)
T PRK08162 444 SGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASATEEEIIAHCRE-----HLAGFKVPKAVVF- 517 (545)
T ss_pred eCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEEeCCCCCCCHHHHHHHHHH-----hcccccCCcEEEe-
Confidence 4799999999999999999999999999998765444333 23578899999999 9999999999875
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 518 ~~iP~t~~gK~~ 529 (545)
T PRK08162 518 GELPKTSTGKIQ 529 (545)
T ss_pred cccCCCCCcCCc
Confidence 689999999999
No 91
>PRK09274 peptide synthase; Provisional
Probab=99.41 E-value=4.8e-13 Score=116.62 Aligned_cols=81 Identities=15% Similarity=0.105 Sum_probs=62.4
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|+||+|.|||++|.+||+|.+|+|+|++++. ++...+ ...+.+++.++|++ .+. .++.++.|+.+.+++
T Consensus 449 ~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~~-~l~-~~~~~~~~~~~~~~~ 525 (552)
T PRK09274 449 AGGTLYTIPCERIFNTHPGVKRSALVGVGVPG-AQRPVLCVELEPGVACSKSALYQELRA-LAA-AHPHTAGIERFLIHP 525 (552)
T ss_pred CCEEECcHHHHHHHHhCcccceeEEEEeCCCC-CceEEEEEEccCccccchHHHhhhhHH-HHH-hcCCCcceeEEeccC
Confidence 79999999999999999999999999999753 333222 23455567777766 111 234557889999999
Q ss_pred ccCCC--CCCccc
Q psy8228 75 NWTLV--DVFKTQ 85 (149)
Q Consensus 75 ~lP~T--~tGKi~ 85 (149)
+||+| ++||++
T Consensus 526 ~lP~t~~~~GKi~ 538 (552)
T PRK09274 526 SFPVDIRHNAKIF 538 (552)
T ss_pred CCCcccccccccc
Confidence 99999 799999
No 92
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.40 E-value=1.3e-12 Score=111.54 Aligned_cols=80 Identities=21% Similarity=0.190 Sum_probs=71.0
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|++|+|.+||++|.++|+|.+++|++++++..++..++ ...+.+++++++++ +|+.|.+|..+.++
T Consensus 423 ~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-----~l~~~~~p~~i~~v 497 (521)
T PRK06187 423 SGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGATLDAKELRAFLRG-----RLAKFKLPKRIAFV 497 (521)
T ss_pred cCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHHH-----hccCCCCceEEEEc
Confidence 3799999999999999999999999999998665555332 23678899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+++|+|++||++
T Consensus 498 ~~~P~t~~gK~~ 509 (521)
T PRK06187 498 DELPRTSVGKIL 509 (521)
T ss_pred cCCCCCCCCCee
Confidence 999999999999
No 93
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.39 E-value=1.4e-12 Score=113.31 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=68.1
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
+|++|+|.|||++|.+||+|.+++|+|+++. .++..++ ...+.+++.++|++ +|++|++|+.+.+++
T Consensus 435 ~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~-~~~~~~~~vv~~~~~~~~~~~l~~~~~~-----~l~~~~~P~~i~~~~ 508 (540)
T PRK06164 435 GGFLVNPAEIEHALEALPGVAAAQVVGATRD-GKTVPVAFVIPTDGASPDEAGLMAACRE-----ALAGFKVPARVQVVE 508 (540)
T ss_pred CCEEcCHHHHHHHHHhCCCceeEEEEecCCC-CceeEEEEEEeCCCCCCCHHHHHHHHHh-----hcccCcCCcEEEEec
Confidence 7999999999999999999999999999843 2223332 23678899999999 999999999999999
Q ss_pred ccCCCCCC---ccc
Q psy8228 75 NWTLVDVF---KTQ 85 (149)
Q Consensus 75 ~lP~T~tG---Ki~ 85 (149)
++|+|++| |++
T Consensus 509 ~~P~t~~g~~~Ki~ 522 (540)
T PRK06164 509 AFPVTESANGAKIQ 522 (540)
T ss_pred CCCCCCCCcccccc
Confidence 99999999 999
No 94
>PLN02479 acetate-CoA ligase
Probab=99.38 E-value=1e-12 Score=115.65 Aligned_cols=79 Identities=14% Similarity=0.076 Sum_probs=66.6
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----e-------cCCHHHHHHHHhccccccCCCCCCcee
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----K-------KIKLFQVFTSMKRQQCIRAFLTYKFIM 68 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~-------~~~~~~L~~~l~~~~~~~~L~~ykvP~ 68 (149)
++|+||+|.|||.+|.+||.|.+|+|+|+++...++..++ . ....++|.++++. +||+|++|+
T Consensus 458 ~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-----~l~~~~~P~ 532 (567)
T PLN02479 458 SGGENISSLEVENVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRE-----RLPAYWVPK 532 (567)
T ss_pred eCCEEEcHHHHHHHHHhCcccceeeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHh-----hcccccCCc
Confidence 4799999999999999999999999999987654443333 1 1234688999988 999999999
Q ss_pred EEEEecccCCCCCCccc
Q psy8228 69 AIWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 69 ~v~~vd~lP~T~tGKi~ 85 (149)
.+.+ +++|+|++||++
T Consensus 533 ~~~~-~~iP~t~~gKv~ 548 (567)
T PLN02479 533 SVVF-GPLPKTATGKIQ 548 (567)
T ss_pred eEEe-ccCCCCCccCee
Confidence 9877 789999999999
No 95
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.37 E-value=7.6e-13 Score=117.84 Aligned_cols=85 Identities=11% Similarity=0.113 Sum_probs=71.3
Q ss_pred CeEEechHHHHHHHhc-CCCccc--EEEEEEEcCCCCeeEEE----e----cCCHHHHHHHHhccccccCCC-CCCc-ee
Q psy8228 2 RGENVATSEVEDALSK-IVQLKD--AAVYGVETSALNTLGVL----K----KIKLFQVFTSMKRQQCIRAFL-TYKF-IM 68 (149)
Q Consensus 2 gGenVsp~EVE~vL~~-hP~V~e--aaVvGVpd~~~~~~~~A----~----~~~~~~L~~~l~~~~~~~~L~-~ykv-P~ 68 (149)
+|+||+|.|||++|.+ ||+|.+ |+|+|+||+. ++..++ . ..+.++|.++|++ .|+ .|++ |+
T Consensus 504 ~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~~-----~l~~~~~~~p~ 577 (612)
T PRK12476 504 DGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRADPAPAIDAIRA-----AVSRRHGLAVA 577 (612)
T ss_pred CCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcccccHHHHHHHHHH-----HHHHhhCCcce
Confidence 7999999999999985 899999 8889999875 444333 1 2567889999998 777 5888 68
Q ss_pred EEEEec--ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 69 AIWLWK--NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 69 ~v~~vd--~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
.+.|++ +||+|++||++ |+.|++.
T Consensus 578 ~v~~v~~~~lP~t~~GKi~--------------------r~~L~~~ 603 (612)
T PRK12476 578 DVRLVPAGAIPRTTSGKLA--------------------RRACRAQ 603 (612)
T ss_pred EEEEECCCCcCcCCchHHH--------------------HHHHHHH
Confidence 999997 59999999999 9999886
No 96
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.37 E-value=1.5e-12 Score=125.34 Aligned_cols=80 Identities=16% Similarity=0.138 Sum_probs=67.3
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE----e-c---C-------------------------CHHH
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL----K-K---I-------------------------KLFQ 47 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A----~-~---~-------------------------~~~~ 47 (149)
.+|+||+|.|||.+|.+||+|.+|+|+++++...+...++ . . . ..++
T Consensus 706 i~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1389)
T TIGR03443 706 IRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKD 785 (1389)
T ss_pred eCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHHH
Confidence 4799999999999999999999999999987654433333 1 0 0 1357
Q ss_pred HHHHHhccccccCCCCCCceeEEEEecccCCCCCCccc
Q psy8228 48 VFTSMKRQQCIRAFLTYKFIMAIWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 48 L~~~l~~~~~~~~L~~ykvP~~v~~vd~lP~T~tGKi~ 85 (149)
++++|++ +||.|++|..+.++++||+|++||++
T Consensus 786 l~~~l~~-----~Lp~y~~P~~~~~~~~lP~t~~GKid 818 (1389)
T TIGR03443 786 IREYLKK-----KLPSYAIPTVIVPLKKLPLNPNGKVD 818 (1389)
T ss_pred HHHHHHh-----hCCcccCCceEEEcccCCCCCCcccc
Confidence 8888988 99999999999999999999999999
No 97
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.35 E-value=2.9e-12 Score=110.54 Aligned_cols=80 Identities=23% Similarity=0.118 Sum_probs=69.0
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----e-----cCCHHHHHHHHhccccccCCCCCCceeEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----K-----KIKLFQVFTSMKRQQCIRAFLTYKFIMAI 70 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~-----~~~~~~L~~~l~~~~~~~~L~~ykvP~~v 70 (149)
++|++|+|.|||++|.+||+|.++++++++++...++..+ . ....+++.++|++ +|++|++|..+
T Consensus 412 ~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~-----~l~~~~~p~~i 486 (508)
T TIGR02262 412 VSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKD-----RLAPYKYPRWI 486 (508)
T ss_pred eCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHH-----hcccCCCCceE
Confidence 4799999999999999999999999999987655444322 1 2336789999998 99999999999
Q ss_pred EEecccCCCCCCccc
Q psy8228 71 WLWKNWTLVDVFKTQ 85 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~ 85 (149)
.+++++|+|++||++
T Consensus 487 ~~~~~iP~t~~gKi~ 501 (508)
T TIGR02262 487 VFVDDLPKTATGKIQ 501 (508)
T ss_pred EEecCCCCCCCCcEe
Confidence 999999999999999
No 98
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.32 E-value=4e-12 Score=109.56 Aligned_cols=75 Identities=15% Similarity=0.004 Sum_probs=61.6
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-----ecCC----HHHHHHHHhccccccCCCCCCceeEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-----KKIK----LFQVFTSMKRQQCIRAFLTYKFIMAIW 71 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-----~~~~----~~~L~~~l~~~~~~~~L~~ykvP~~v~ 71 (149)
.+|+||||.|||++|.+||+|.+|+|+.. +.+.++ ...+ .++|.++|++ +|++|++|+.++
T Consensus 303 ~~G~~V~p~eIE~~l~~~p~V~~~~v~~~-----g~~~~a~vv~~~~~~~~~~~~~l~~~~~~-----~L~~~~~P~~i~ 372 (386)
T TIGR02372 303 VGGVNVSPGHVRDILERNPRVRAAAVRLD-----GRRLKAFIVVAEDADEAELEIELRATAAR-----HLPAPARPDRFR 372 (386)
T ss_pred ECCEEEcHHHHHHHHHcCCCceEEEEEcC-----CceEEEEEEECCCCChHHHHHHHHHHHHH-----hCCCCCCCcEEE
Confidence 37999999999999999999999998631 223322 1112 4578889988 999999999999
Q ss_pred EecccCCCCCCccc
Q psy8228 72 LWKNWTLVDVFKTQ 85 (149)
Q Consensus 72 ~vd~lP~T~tGKi~ 85 (149)
+++++|+|++||++
T Consensus 373 ~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 373 FGTELPRTGAGKLA 386 (386)
T ss_pred EcccCCCCCCCCcC
Confidence 99999999999985
No 99
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.27 E-value=1.1e-11 Score=118.06 Aligned_cols=80 Identities=10% Similarity=0.078 Sum_probs=66.9
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEc----CCCCe--eEEE-------ecCCHHHHHHHHhccccccCCCCCCce
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVET----SALNT--LGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFI 67 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd----~~~~~--~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP 67 (149)
.+|+||+|.|||++|.+||+|.+|+|+++.. ...++ ..++ ...+.++|+++|++ +||.|++|
T Consensus 865 ~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~-----~Lp~~~~P 939 (1296)
T PRK10252 865 IRGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRE-----RLPPHMVP 939 (1296)
T ss_pred EeeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHHHHHHh-----hCchhcCC
Confidence 3799999999999999999999999987731 11122 2333 24578899999999 99999999
Q ss_pred eEEEEecccCCCCCCccc
Q psy8228 68 MAIWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 68 ~~v~~vd~lP~T~tGKi~ 85 (149)
..+.++++||+|++||++
T Consensus 940 ~~~~~~~~lP~t~~GKid 957 (1296)
T PRK10252 940 VVLLQLDQLPLSANGKLD 957 (1296)
T ss_pred cEEEEecCCCCCCCcChh
Confidence 999999999999999999
No 100
>PRK12316 peptide synthase; Provisional
Probab=99.25 E-value=1e-11 Score=132.28 Aligned_cols=79 Identities=15% Similarity=0.077 Sum_probs=69.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||.+|.+||+|.+|+|++++++ .+...+| ...+.++++++|++ +||.|++|..+.++
T Consensus 2409 i~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~~~l~~~l~~-----~Lp~~~vP~~~~~l 2482 (5163)
T PRK12316 2409 IRGFRIELGEIEARLQAHPAVREAVVVAQDGA-SGKQLVAYVVPDDAAEDLLAELRAWLAA-----RLPAYMVPAHWVVL 2482 (5163)
T ss_pred EcCccCChHHHHHHHhhCcccceEEEEEEecC-CCeEEEEEEEecCCCccCHHHHHHHHHh-----hCchhcCcceEeee
Confidence 37999999999999999999999999999865 3333443 24568899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
++||+|+|||++
T Consensus 2483 ~~lP~t~~GKid 2494 (5163)
T PRK12316 2483 ERLPLNPNGKLD 2494 (5163)
T ss_pred cccCCCCCCccC
Confidence 999999999999
No 101
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.25 E-value=1.1e-11 Score=109.33 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=71.9
Q ss_pred CeEEechHHHHHHHhcCCCcc--cEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCC-CCCceeEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLK--DAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFL-TYKFIMAIW 71 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~--eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~-~ykvP~~v~ 71 (149)
+|+||+|.|||++|.+||+|. +|+|+|++++. ++..++ ...+.++|.++|++ .+. .|++|..+.
T Consensus 467 ~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~-----~l~~~~~~~~~i~ 540 (579)
T PRK09192 467 NGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEERRGQLIHALAA-----LVRSEFGVEAAVE 540 (579)
T ss_pred CCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChHHHHHHHHHHHH-----HHHHHhCCCceEE
Confidence 799999999999999999999 99999999864 334322 13456789999998 764 799999998
Q ss_pred Eec--ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcC
Q psy8228 72 LWK--NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSG 113 (149)
Q Consensus 72 ~vd--~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 113 (149)
++. +||+|++||++ |+.|++..
T Consensus 541 ~~~~~~lP~t~~GKv~--------------------R~~l~~~~ 564 (579)
T PRK09192 541 LVPPHSLPRTSSGKLS--------------------RAKAKKRY 564 (579)
T ss_pred EeCCCCcCCCCCcchh--------------------HHHHHHHH
Confidence 886 89999999999 99998773
No 102
>PRK12316 peptide synthase; Provisional
Probab=99.24 E-value=1.3e-11 Score=131.49 Aligned_cols=76 Identities=17% Similarity=0.070 Sum_probs=67.6
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|++++ +...+| ...+.++++++|++ +||+|++|+.+.++
T Consensus 914 ~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~~~~~~~~l~~~l~~-----~Lp~y~vP~~i~~v 984 (5163)
T PRK12316 914 LRGLRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVVLESEGGDWREALKAHLAA-----SLPEYMVPAQWLAL 984 (5163)
T ss_pred EceEEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEEccCCCCCCHHHHHHHHHh-----hCCCccCCCeEEEH
Confidence 379999999999999999999999999996 233333 24567899999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
++||+|++||++
T Consensus 985 ~~lP~t~~GKid 996 (5163)
T PRK12316 985 ERLPLTPNGKLD 996 (5163)
T ss_pred hhCCCCCCCChh
Confidence 999999999999
No 103
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.24 E-value=3.4e-11 Score=108.38 Aligned_cols=81 Identities=23% Similarity=0.241 Sum_probs=59.4
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-e--------------cCCHHHHHHHHhcc-----------
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-K--------------KIKLFQVFTSMKRQ----------- 55 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-~--------------~~~~~~L~~~l~~~----------- 55 (149)
+|+||+|.|||++|.+||+|.+|+|+|. .+++..+| . ..+.+++.++|+..
T Consensus 517 ~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 593 (651)
T PLN02736 517 QGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMD 593 (651)
T ss_pred CCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHH
Confidence 6999999999999999999999999993 23333333 1 12323444444310
Q ss_pred -cc-ccCCCCCCceeEEEEecccC------CCCCCccc
Q psy8228 56 -QC-IRAFLTYKFIMAIWLWKNWT------LVDVFKTQ 85 (149)
Q Consensus 56 -~~-~~~L~~ykvP~~v~~vd~lP------~T~tGKi~ 85 (149)
.+ .++|+.|++|+++.++++.| +|++||++
T Consensus 594 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~ 631 (651)
T PLN02736 594 AVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVK 631 (651)
T ss_pred HHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhh
Confidence 00 12699999999999999987 69999999
No 104
>PRK12467 peptide synthase; Provisional
Probab=99.23 E-value=1.7e-11 Score=128.73 Aligned_cols=79 Identities=14% Similarity=0.057 Sum_probs=68.3
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|+++++. .+...++ ...+.++++++|++ +||.|++|..+.++
T Consensus 3499 i~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~~-~~~~lva~v~~~~~~~~~~~~l~~~l~~-----~Lp~y~vP~~~~~l 3572 (3956)
T PRK12467 3499 IRGFRIELGEIEARLLQHPSVREAVVLARDGA-GGKQLVAYVVPADPQGDWRETLRDHLAA-----SLPDYMVPAQLLVL 3572 (3956)
T ss_pred eceEeecHHHHHHHHhhCcccceEEEEEecCC-CCcEEEEEEeCCCCCcccHHHHHHHHhc-----cCChhhCCCeeeee
Confidence 47999999999999999999999999998643 3333333 12457889999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
++||+|++||++
T Consensus 3573 ~~lP~t~~GKid 3584 (3956)
T PRK12467 3573 AAMPLGPNGKVD 3584 (3956)
T ss_pred ccCCCCCCCccc
Confidence 999999999999
No 105
>PRK12467 peptide synthase; Provisional
Probab=99.14 E-value=9.6e-11 Score=123.16 Aligned_cols=79 Identities=16% Similarity=0.140 Sum_probs=67.5
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE------------ecCCHHHHHHHHhccccccCCCCCCcee
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL------------KKIKLFQVFTSMKRQQCIRAFLTYKFIM 68 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A------------~~~~~~~L~~~l~~~~~~~~L~~ykvP~ 68 (149)
.+|+||+|.|||++|.+||+|.+|+|++.++.. ++..++ ...+.++|+++|++ .||.|++|.
T Consensus 918 i~G~rI~~~eIE~~L~~~p~V~~a~v~~~~~~~-~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~-----~Lp~y~vP~ 991 (3956)
T PRK12467 918 IRGFRIELGEIEARLLAQPGVREAVVLAQPGDA-GLQLVAYLVPAAVADGAEHQATRDELKAQLRQ-----VLPDYMVPA 991 (3956)
T ss_pred ECCEecCHHHHHHHHHhCCCcceEEEEEEcCCC-CcEEEEEEEecccccccccccCHHHHHHHHHh-----hCchhcCCc
Confidence 379999999999999999999999999986542 333332 12346789999999 999999999
Q ss_pred EEEEecccCCCCCCccc
Q psy8228 69 AIWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 69 ~v~~vd~lP~T~tGKi~ 85 (149)
.+.++++||+|++||++
T Consensus 992 ~~~~l~~lP~t~~GKid 1008 (3956)
T PRK12467 992 HLLLLDSLPLTPNGKLD 1008 (3956)
T ss_pred eEeeecccCCCCCCCcC
Confidence 99999999999999999
No 106
>PRK05691 peptide synthase; Validated
Probab=99.13 E-value=1.1e-10 Score=123.40 Aligned_cols=79 Identities=16% Similarity=0.126 Sum_probs=66.6
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE---e----------cCCHHHHHHHHhccccccCCCCCCce
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL---K----------KIKLFQVFTSMKRQQCIRAFLTYKFI 67 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A---~----------~~~~~~L~~~l~~~~~~~~L~~ykvP 67 (149)
.+|+||+|.|||++|.+||+|.+|+|++++++ .+...++ . ....++|+++|++ +||.|++|
T Consensus 2596 i~G~rIe~~EIE~~l~~~p~V~~a~V~~~~~~-~~~~lva~vv~~~~~~~~~~~~~~~~~l~~~l~~-----~Lp~ymvP 2669 (4334)
T PRK05691 2596 IRGFRIELGEIESRLLEHPAVREAVVLALDTP-SGKQLAGYLVSAVAGQDDEAQAALREALKAHLKQ-----QLPDYMVP 2669 (4334)
T ss_pred eeeEEechHHHHHHHHhCCCcceEEEEEeeCC-CCcEEEEEEEecccccccccccccHHHHHHHHHh-----hCccccCC
Confidence 37999999999999999999999999999653 2333332 1 1234789999999 99999999
Q ss_pred eEEEEecccCCCCCCccc
Q psy8228 68 MAIWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 68 ~~v~~vd~lP~T~tGKi~ 85 (149)
..+.++++||+|++||++
T Consensus 2670 ~~~~~v~~lP~t~~GKid 2687 (4334)
T PRK05691 2670 AHLILLDSLPLTANGKLD 2687 (4334)
T ss_pred hhheeecccCCCCCCccc
Confidence 999999999999999999
No 107
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.12 E-value=4.3e-11 Score=106.85 Aligned_cols=79 Identities=10% Similarity=0.072 Sum_probs=63.4
Q ss_pred CeEEec--hHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE--e----------------cCCHHHHHHHHhccccccCC
Q psy8228 2 RGENVA--TSEVEDALSKIVQLKDAAVYGVETSALNTLGVL--K----------------KIKLFQVFTSMKRQQCIRAF 61 (149)
Q Consensus 2 gGenVs--p~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A--~----------------~~~~~~L~~~l~~~~~~~~L 61 (149)
+|+||+ |.|||.++.+||+|++|+|+|++++..+..+.. . ..+.++|+++|++ .|
T Consensus 474 ~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~l 548 (614)
T PRK08180 474 SGTWVSVGPLRARAVSAGAPLVQDVVITGHDRDEIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRE-----RL 548 (614)
T ss_pred CCcEecchhhhHHHHhhcCchhheEEEEcCCCCceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHH-----HH
Confidence 588665 899999999999999999999987532211111 1 1345679999988 88
Q ss_pred CCCC--------ceeEEEEecccCCCCCCccc
Q psy8228 62 LTYK--------FIMAIWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 62 ~~yk--------vP~~v~~vd~lP~T~tGKi~ 85 (149)
+.|+ +|+++.+++++|+|++||+.
T Consensus 549 ~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t 580 (614)
T PRK08180 549 ARLNAQATGSSTRVARALLLDEPPSLDAGEIT 580 (614)
T ss_pred HHHHhhccccHhheeEEEEecCCCCCccCccC
Confidence 8888 99999999999999999998
No 108
>PRK05691 peptide synthase; Validated
Probab=99.11 E-value=1.7e-10 Score=121.79 Aligned_cols=79 Identities=18% Similarity=0.084 Sum_probs=68.0
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.+|+||+|.|||++|.+||+|.+|+|++.++.. +...++ ...+.++|+++|++ +||.|++|..+.++
T Consensus 1533 i~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~~-~~~lva~~~~~~~~~~~~~~l~~~l~~-----~Lp~y~vP~~~~~~ 1606 (4334)
T PRK05691 1533 LRGFRVEPEEIQARLLAQPGVAQAAVLVREGAA-GAQLVGYYTGEAGQEAEAERLKAALAA-----ELPEYMVPAQLIRL 1606 (4334)
T ss_pred ECCEEcCHHHHHHHHHhCCCcceEEEEEeeCCC-CCEEEEEEEeCCCCCCCHHHHHHHHHH-----hCccccCCcEEEEc
Confidence 379999999999999999999999999876532 333333 23467799999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
++||+|++||++
T Consensus 1607 ~~lP~t~~GKid 1618 (4334)
T PRK05691 1607 DQMPLGPSGKLD 1618 (4334)
T ss_pred cccCCCCCCCcC
Confidence 999999999999
No 109
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.10 E-value=1.3e-10 Score=101.20 Aligned_cols=87 Identities=8% Similarity=-0.005 Sum_probs=66.1
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCC--CeeEEE-----ecCC---HHHHHHHHhccccccCCCCC--Ccee
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSAL--NTLGVL-----KKIK---LFQVFTSMKRQQCIRAFLTY--KFIM 68 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~--~~~~~A-----~~~~---~~~L~~~l~~~~~~~~L~~y--kvP~ 68 (149)
++|+||+|.|||++|.+||+|.+++|+|++.+.. ++..++ ...+ ..++.+++++ .|..+ ++|.
T Consensus 442 ~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~-----~l~~~~~~~p~ 516 (545)
T PRK07768 442 MAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAH-----EVVAEVGVRPR 516 (545)
T ss_pred ECCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHH-----HHHHHhCCCcc
Confidence 3799999999999999999999999988874432 222221 1122 2356677776 66544 6899
Q ss_pred EEEEec--ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 69 AIWLWK--NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 69 ~v~~vd--~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
.+.+++ +||+|++||++ |+.|++.
T Consensus 517 ~v~~v~~~~lP~t~~GKi~--------------------r~~l~~~ 542 (545)
T PRK07768 517 NVVVLGPGSIPKTPSGKLR--------------------RANAAEL 542 (545)
T ss_pred EEEEeCCCcCCCCCchhHH--------------------HHHHHHh
Confidence 999997 89999999999 9999875
No 110
>PRK05850 acyl-CoA synthetase; Validated
Probab=98.97 E-value=1.1e-09 Score=96.30 Aligned_cols=85 Identities=14% Similarity=0.032 Sum_probs=61.7
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-------ecCC------HHHHHHHHhccccccCCCC--CC
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-------KKIK------LFQVFTSMKRQQCIRAFLT--YK 65 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-------~~~~------~~~L~~~l~~~~~~~~L~~--yk 65 (149)
.+|+||+|.|||++|.+||++ +|+|++++++ .++..++ ...+ ...+++.+.. .|+. ..
T Consensus 464 ~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~-----~l~~~~~~ 536 (578)
T PRK05850 464 VDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTS-----AISKSHGL 536 (578)
T ss_pred ECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHHHHHHH-----HHHHHhCC
Confidence 379999999999999999995 5899999986 4444333 1122 2345555544 4443 23
Q ss_pred ceeEEEEec--ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhc
Q psy8228 66 FIMAIWLWK--NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRS 112 (149)
Q Consensus 66 vP~~v~~vd--~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 112 (149)
.|..+.+++ +||+|++||++ |+.|++.
T Consensus 537 ~~~~~~~~~~~~iP~t~~GKi~--------------------R~~l~~~ 565 (578)
T PRK05850 537 SVADLVLVAPGSIPITTSGKIR--------------------RAACVEQ 565 (578)
T ss_pred CceEEEEeCCCCcCCCCCchHH--------------------HHHHHHH
Confidence 577777775 89999999999 9999986
No 111
>PRK12582 acyl-CoA synthetase; Provisional
Probab=98.88 E-value=1.7e-09 Score=96.76 Aligned_cols=79 Identities=15% Similarity=0.134 Sum_probs=61.2
Q ss_pred CeEEechHHH--HHHHhcCCCcccEEEEEEEcCCCCeeEEE---------ec--------CCHHHHHHHHhccccccCCC
Q psy8228 2 RGENVATSEV--EDALSKIVQLKDAAVYGVETSALNTLGVL---------KK--------IKLFQVFTSMKRQQCIRAFL 62 (149)
Q Consensus 2 gGenVsp~EV--E~vL~~hP~V~eaaVvGVpd~~~~~~~~A---------~~--------~~~~~L~~~l~~~~~~~~L~ 62 (149)
+|+||+|.|| |.++.+||+|.||+|+|++++..+..... .. .+.++|.++|++ .|+
T Consensus 486 ~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~l~ 560 (624)
T PRK12582 486 TGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAFIGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILRE-----GLS 560 (624)
T ss_pred CCcEechHHHHHHHHHhcCcchheEEEEcCCCCcEEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHH-----HHH
Confidence 6999999888 57889999999999999987654432211 01 134567777776 566
Q ss_pred CCC--------ceeEEEEecccCCCCCCccc
Q psy8228 63 TYK--------FIMAIWLWKNWTLVDVFKTQ 85 (149)
Q Consensus 63 ~yk--------vP~~v~~vd~lP~T~tGKi~ 85 (149)
.++ +|+++.+++++|++.+||+.
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t 591 (624)
T PRK12582 561 AHNAEAGGSSSRIARALLMTEPPSIDAGEIT 591 (624)
T ss_pred HHHhhcCCChhheEEEEEeCCCCCccCCcCC
Confidence 665 99999999999999999998
No 112
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=98.80 E-value=2.1e-08 Score=91.75 Aligned_cols=81 Identities=19% Similarity=0.090 Sum_probs=54.4
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-ecCCHH---------------------------HHHHHHh
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-KKIKLF---------------------------QVFTSMK 53 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-~~~~~~---------------------------~L~~~l~ 53 (149)
+|+||+|.|||++|.+||.|.+|+|+|.+... . .+| ..++.+ ++.+.+.
T Consensus 565 ~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~~--~-~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 641 (696)
T PLN02387 565 HGEYVSLGKVEAALSVSPYVDNIMVHADPFHS--Y-CVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLS 641 (696)
T ss_pred CCeEEchHHHHHHHhcCCCeeEEEEEecCCcc--e-EEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHH
Confidence 59999999999999999999999999986322 1 222 111111 1122221
Q ss_pred ccccccCCCCCCceeEEEEecccC------CCCCCccc
Q psy8228 54 RQQCIRAFLTYKFIMAIWLWKNWT------LVDVFKTQ 85 (149)
Q Consensus 54 ~~~~~~~L~~ykvP~~v~~vd~lP------~T~tGKi~ 85 (149)
+.....+|+.|++|+.|+++++-. .|+|+|++
T Consensus 642 ~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K~~ 679 (696)
T PLN02387 642 KAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLK 679 (696)
T ss_pred HHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhhhh
Confidence 100013799999999999998754 56666777
No 113
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=98.79 E-value=1.8e-08 Score=91.37 Aligned_cols=81 Identities=19% Similarity=0.175 Sum_probs=57.0
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-ecCCHHHHHHHHhcc----------------------cc-
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-KKIKLFQVFTSMKRQ----------------------QC- 57 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-~~~~~~~L~~~l~~~----------------------~~- 57 (149)
+|+||+|.|||++|.+||.|.+|+|+|.++. ...+| ..++.+++.+|++++ ..
T Consensus 523 ~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~~---~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (660)
T PLN02861 523 QGEYVAVENLENTYSRCPLIASIWVYGNSFE---SFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDELNS 599 (660)
T ss_pred CCeEEcHHHHHHHHhcCCCeeEEEEEecCCc---ceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHH
Confidence 6999999999999999999999999998732 22333 112222222222211 00
Q ss_pred ---ccCCCCCCceeEEEEec-cc-----CCCCCCccc
Q psy8228 58 ---IRAFLTYKFIMAIWLWK-NW-----TLVDVFKTQ 85 (149)
Q Consensus 58 ---~~~L~~ykvP~~v~~vd-~l-----P~T~tGKi~ 85 (149)
...|+.|..++.+.+.+ .+ .+|+|+|++
T Consensus 600 ~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~ 636 (660)
T PLN02861 600 TGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLK 636 (660)
T ss_pred HHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhh
Confidence 12589999999999966 46 799999999
No 114
>PLN02614 long-chain acyl-CoA synthetase
Probab=98.73 E-value=4.2e-08 Score=89.31 Aligned_cols=81 Identities=20% Similarity=0.269 Sum_probs=55.2
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-ecC----------------CH----------HHHHHHHhc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-KKI----------------KL----------FQVFTSMKR 54 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-~~~----------------~~----------~~L~~~l~~ 54 (149)
+|+||+|.|||++|.+||+|.+|+|+|.++... .+| ..+ +. +.+.+.+.+
T Consensus 526 ~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~~---l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 602 (666)
T PLN02614 526 QGEYVAVENIENIYGEVQAVDSVWVYGNSFESF---LVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGELVK 602 (666)
T ss_pred CCeeecHHHHHHHHhcCCCeeEEEEEecCCcce---EEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHHHHH
Confidence 699999999999999999999999999863221 222 001 11 111222211
Q ss_pred cccccCCCCCCceeEEEEecc-c-----CCCCCCccc
Q psy8228 55 QQCIRAFLTYKFIMAIWLWKN-W-----TLVDVFKTQ 85 (149)
Q Consensus 55 ~~~~~~L~~ykvP~~v~~vd~-l-----P~T~tGKi~ 85 (149)
.....+|+.|.+++.+.++++ + -+|+|+|++
T Consensus 603 ~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~k 639 (666)
T PLN02614 603 MAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKK 639 (666)
T ss_pred HHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhh
Confidence 000137999999999999874 3 389999999
No 115
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=98.54 E-value=3.9e-07 Score=82.98 Aligned_cols=80 Identities=18% Similarity=0.210 Sum_probs=54.6
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE-ecCCHH----------------------HHH----HHHhc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL-KKIKLF----------------------QVF----TSMKR 54 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A-~~~~~~----------------------~L~----~~l~~ 54 (149)
+|+||+|.|||++|.+||.|.+|+|+|.. .+...+| ..++.+ +++ +.+..
T Consensus 523 ~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 599 (660)
T PLN02430 523 QGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKS 599 (660)
T ss_pred CCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHH
Confidence 59999999999999999999999999942 2222333 111111 122 22221
Q ss_pred ccc-ccCCCCCCceeEEEEeccc------CCCCCCccc
Q psy8228 55 QQC-IRAFLTYKFIMAIWLWKNW------TLVDVFKTQ 85 (149)
Q Consensus 55 ~~~-~~~L~~ykvP~~v~~vd~l------P~T~tGKi~ 85 (149)
.+ ..+|+.|.+++.+.+.++- .+|+|+|++
T Consensus 600 -~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~ 636 (660)
T PLN02430 600 -TAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKR 636 (660)
T ss_pred -HHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhh
Confidence 11 1369999999999998743 489999999
No 116
>KOG1178|consensus
Probab=98.48 E-value=2.1e-07 Score=89.40 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=69.4
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE--------ecCCHHHHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL--------KKIKLFQVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A--------~~~~~~~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
+|.+|...||+.++..||.|.++.+.++.+...++...| .......|+.||.. .|+.|++|..+.++
T Consensus 483 rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~~~~~i~~~l~~-----~La~y~vPs~~V~l 557 (1032)
T KOG1178|consen 483 RGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSVLIRDIRNYLKK-----ELASYMLPSLVVPL 557 (1032)
T ss_pred ccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCchhHHHHHHhhcc-----cccceecceEEEEh
Confidence 799999999999999999999999999998766444333 23346779999999 99999999999999
Q ss_pred cccCCCCCCccc
Q psy8228 74 KNWTLVDVFKTQ 85 (149)
Q Consensus 74 d~lP~T~tGKi~ 85 (149)
+.+|.|++||+|
T Consensus 558 ~~vPl~~~GKvD 569 (1032)
T KOG1178|consen 558 AKVPLNPNGKVD 569 (1032)
T ss_pred hhCCcCCCCCcC
Confidence 999999999999
No 117
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=98.24 E-value=4e-06 Score=78.26 Aligned_cols=29 Identities=28% Similarity=0.455 Sum_probs=27.6
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVE 30 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVp 30 (149)
+|+||+|.|||++|.+||.|.+|+|+|..
T Consensus 600 ~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~ 628 (746)
T PTZ00342 600 QGEYIETDMLNNLYSQISFINFCVVYGDD 628 (746)
T ss_pred CCEEEchHHHHHHHhcCCCccEEEEEccC
Confidence 69999999999999999999999999973
No 118
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=98.15 E-value=8.3e-06 Score=69.84 Aligned_cols=75 Identities=15% Similarity=0.113 Sum_probs=53.6
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCee--EEE--e-cC---C--------HHHHHHHHhccccccCCCCCC
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTL--GVL--K-KI---K--------LFQVFTSMKRQQCIRAFLTYK 65 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~--~~A--~-~~---~--------~~~L~~~l~~~~~~~~L~~yk 65 (149)
+|+||+|.|||++|.+||+|....++.++......+ +.+ . .. + .++|.+++++ .|+.+.
T Consensus 324 ~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~ 398 (422)
T TIGR02155 324 RGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESYTLRLHEQASLLAGEIQHTIKQ-----EVGVSM 398 (422)
T ss_pred CCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcccccchHHHHHHHHHHHHHHHh-----ccCcEE
Confidence 699999999999999999999777777765432223 211 1 11 1 4567888887 777663
Q ss_pred ceeEEEEe--cccCCCCCCccc
Q psy8228 66 FIMAIWLW--KNWTLVDVFKTQ 85 (149)
Q Consensus 66 vP~~v~~v--d~lP~T~tGKi~ 85 (149)
.|.++ ++||+|+ ||++
T Consensus 399 ---~v~~~~~~~lp~~~-GK~~ 416 (422)
T TIGR02155 399 ---DVHLVEPGSLPRSE-GKAR 416 (422)
T ss_pred ---EEEEECCCCccCCC-CCce
Confidence 46665 6999988 9998
No 119
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=98.07 E-value=2e-05 Score=72.07 Aligned_cols=81 Identities=10% Similarity=0.052 Sum_probs=51.4
Q ss_pred CeEEechHHHHHHHhcCCCccc--EEEEEEEcCCCCeeEEE-ecCCHHH--------------------------HHHHH
Q psy8228 2 RGENVATSEVEDALSKIVQLKD--AAVYGVETSALNTLGVL-KKIKLFQ--------------------------VFTSM 52 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~e--aaVvGVpd~~~~~~~~A-~~~~~~~--------------------------L~~~l 52 (149)
+|+||+|.|||++|.+||.|.+ ++|++.++. ...+| ..++.+. +.+.+
T Consensus 566 ~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~~---~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 642 (700)
T PTZ00216 566 LGEYIALEALEALYGQNELVVPNGVCVLVHPAR---SYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESL 642 (700)
T ss_pred CCceeccHHHHHHHhcCcCcccceEEEEEecCC---ceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHH
Confidence 7999999999999999999997 455555432 11232 1111111 11111
Q ss_pred hccccccCCCCCCceeEEEEecc------cCCCCCCccc
Q psy8228 53 KRQQCIRAFLTYKFIMAIWLWKN------WTLVDVFKTQ 85 (149)
Q Consensus 53 ~~~~~~~~L~~ykvP~~v~~vd~------lP~T~tGKi~ 85 (149)
.+.....+|..|..|+.+.++++ =-+|+|+|++
T Consensus 643 ~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~ 681 (700)
T PTZ00216 643 QETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKLK 681 (700)
T ss_pred HHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhccc
Confidence 11000137899999999999853 2369999999
No 120
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=96.79 E-value=0.0047 Score=43.53 Aligned_cols=74 Identities=15% Similarity=0.047 Sum_probs=38.6
Q ss_pred eEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeE--EE---ecC-----CHH----HHHHHHhccccccCCCCCCcee
Q psy8228 3 GENVATSEVEDALSKIVQLKDAAVYGVETSALNTLG--VL---KKI-----KLF----QVFTSMKRQQCIRAFLTYKFIM 68 (149)
Q Consensus 3 GenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~--~A---~~~-----~~~----~L~~~l~~~~~~~~L~~ykvP~ 68 (149)
|-||||..||++|.++|++....-+-+...+...+. .+ ... +.+ .|.+.+++ .| .+--
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~-----~l---gv~~ 72 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKE-----RL---GVRP 72 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHH-----HH---SS-E
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHh-----hc---CceE
Confidence 889999999999999999994444444432221221 12 222 123 34444444 33 2223
Q ss_pred EEEEec--ccCCCCCCccc
Q psy8228 69 AIWLWK--NWTLVDVFKTQ 85 (149)
Q Consensus 69 ~v~~vd--~lP~T~tGKi~ 85 (149)
.|.+++ +||+| .||..
T Consensus 73 ~V~lv~~gtLpr~-~~K~~ 90 (96)
T PF14535_consen 73 EVELVPPGTLPRS-EGKAK 90 (96)
T ss_dssp EEEEE-TT-S----SSSS-
T ss_pred EEEEECCCCccCC-CCcce
Confidence 677776 69998 67876
No 121
>PTZ00297 pantothenate kinase; Provisional
Probab=96.72 E-value=0.0074 Score=60.65 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=28.0
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVET 31 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd 31 (149)
+||||+|..||+.+..+|-|.+++|+|-+.
T Consensus 866 ~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~ 895 (1452)
T PTZ00297 866 AYEYVIAAELERIFSQSRYVNDIFLYADPS 895 (1452)
T ss_pred CCcEEcHHHHHHHHhcCCCccEEEEEecCC
Confidence 699999999999999999999999999653
No 122
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=93.83 E-value=0.12 Score=48.05 Aligned_cols=27 Identities=30% Similarity=0.502 Sum_probs=26.5
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYG 28 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvG 28 (149)
+|+||.|..||+.+.++|-|.+++|||
T Consensus 479 ~GknIaP~~IE~~l~~~~~I~qi~vvg 505 (613)
T COG1022 479 NGKNIAPEPIESKLAKSPLIEQICVVG 505 (613)
T ss_pred CCcccChHHHHHHHhcCCCeeEEEEEe
Confidence 699999999999999999999999999
No 123
>KOG1256|consensus
Probab=88.84 E-value=0.84 Score=43.15 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=27.8
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEc
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVET 31 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd 31 (149)
+||||.|..||++..+.+-|.+.+|+|-..
T Consensus 557 qGEyVaPe~IEniy~~~~~V~qi~V~g~s~ 586 (691)
T KOG1256|consen 557 QGEYVAPEKIENIYKRSLPVQQIFVLGDSL 586 (691)
T ss_pred CCCccChHHHHHHHhcCCceEEEEEECCcc
Confidence 699999999999999999999999998753
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.01 E-value=3 Score=36.43 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=17.7
Q ss_pred CeEEechHHHHHHHhcCCCcc
Q psy8228 2 RGENVATSEVEDALSKIVQLK 22 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~ 22 (149)
+|-||+|.+||++|.+++++.
T Consensus 336 ~g~~~~p~~ie~~l~~~~~~~ 356 (445)
T TIGR03335 336 SGVPFNRVDVERAVFQRENMD 356 (445)
T ss_pred CCEEeCHHHHHHHHhccCCCC
Confidence 799999999999999964433
No 125
>KOG1180|consensus
Probab=79.87 E-value=5.8 Score=37.20 Aligned_cols=67 Identities=21% Similarity=0.231 Sum_probs=48.5
Q ss_pred CeEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE---------------ecCC-----------------HHHHH
Q psy8228 2 RGENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVL---------------KKIK-----------------LFQVF 49 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A---------------~~~~-----------------~~~L~ 49 (149)
.||-||..-||.+|...|-|...+||+-+... .+++ ...+ ..+|.
T Consensus 545 ~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~s---~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~ 621 (678)
T KOG1180|consen 545 NGEYISLGKVEAALRSSPYVDNICVYADSNKS---KPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELI 621 (678)
T ss_pred ccceeehHHHHHHHhcCcchhheEEecccccc---eeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHH
Confidence 69999999999999999999999999865422 1222 1111 12334
Q ss_pred HHHhccccccCCCCCCceeEEEEecc
Q psy8228 50 TSMKRQQCIRAFLTYKFIMAIWLWKN 75 (149)
Q Consensus 50 ~~l~~~~~~~~L~~ykvP~~v~~vd~ 75 (149)
+.-++ ++|..+.+|..|++.++
T Consensus 622 ~~ak~----~~L~~iEip~~I~l~~e 643 (678)
T KOG1180|consen 622 EAAKS----QKLERIEIPAKIVLSPE 643 (678)
T ss_pred HHHHh----cccccccccceeEecCC
Confidence 44433 48999999999999876
No 126
>KOG3628|consensus
Probab=73.00 E-value=10 Score=38.10 Aligned_cols=87 Identities=13% Similarity=0.103 Sum_probs=57.3
Q ss_pred CeEEechHHHHHHHh-cCCCcccEEEEEEEcCCCCee-EEE----ecCCHHHHHHHHhccccccCCC-CCCceeEEEEec
Q psy8228 2 RGENVATSEVEDALS-KIVQLKDAAVYGVETSALNTL-GVL----KKIKLFQVFTSMKRQQCIRAFL-TYKFIMAIWLWK 74 (149)
Q Consensus 2 gGenVsp~EVE~vL~-~hP~V~eaaVvGVpd~~~~~~-~~A----~~~~~~~L~~~l~~~~~~~~L~-~ykvP~~v~~vd 74 (149)
+|-+=+|.+||+.+. .||.|..|+|+-. +|. +++ .+....+|.--+-. .-|. .|-+=.-+.|++
T Consensus 1258 ~GL~h~p~DIE~TV~~vH~~I~~cavF~~-----~glvVvviE~~gq~~~~~LvPlIv~----~vL~eH~iI~dvV~fV~ 1328 (1363)
T KOG3628|consen 1258 NGLRHFPSDIETTVERVHPSIGGCAVFQA-----TGLVVVVIECHGQQELADLVPLIVN----VVLEEHYIILDVVAFVD 1328 (1363)
T ss_pred cCcccCcchHHHHHHHhcccccceeeEee-----CCeEEEEEEecCchhHhhhhHHHHH----HHHhhcceEEEEEEEec
Confidence 688899999999886 6999999999944 455 333 22222222222211 0233 344556677777
Q ss_pred --ccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCC
Q psy8228 75 --NWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNEN 117 (149)
Q Consensus 75 --~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~ 117 (149)
.+|+++.|--+ |..++.+.+...
T Consensus 1329 ~G~~p~~~~gEK~--------------------R~~I~~~w~~~k 1353 (1363)
T KOG3628|consen 1329 KGVFPRNSRGEKQ--------------------RAHILDSWLAGK 1353 (1363)
T ss_pred CCccccCCchhhH--------------------HHHHHHHHHhcc
Confidence 59999999888 888888755443
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=62.33 E-value=35 Score=30.81 Aligned_cols=27 Identities=30% Similarity=0.399 Sum_probs=24.4
Q ss_pred CeEEechHHHHHHHhcCCCcc---cEEEEE
Q psy8228 2 RGENVATSEVEDALSKIVQLK---DAAVYG 28 (149)
Q Consensus 2 gGenVsp~EVE~vL~~hP~V~---eaaVvG 28 (149)
.|.||+|..||++|.+.+.+. +..+..
T Consensus 340 ~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~ 369 (438)
T COG1541 340 RGVNVFPSQIERVLLQIPEVTPHYQIILTR 369 (438)
T ss_pred CCEEeCHHHHHHHHhcccCCCceEEEEEec
Confidence 599999999999999999999 666666
No 128
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=42.64 E-value=56 Score=28.92 Aligned_cols=46 Identities=37% Similarity=0.340 Sum_probs=35.6
Q ss_pred eEEechHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEEecCCHHHHHHHHhc
Q psy8228 3 GENVATSEVEDALSKIVQLKDAAVYGVETSALNTLGVLKKIKLFQVFTSMKR 54 (149)
Q Consensus 3 GenVsp~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A~~~~~~~L~~~l~~ 54 (149)
|+-|.|.+||++|.+.|++.-++++-++.+ .| .-.+.++|.+-+++
T Consensus 114 g~~v~p~~v~~~L~~~~~~~~V~~vH~ETS--TG----vlnpl~~I~~~~k~ 159 (383)
T COG0075 114 GEAVDPEEVEEALDKDPDIKAVAVVHNETS--TG----VLNPLKEIAKAAKE 159 (383)
T ss_pred CCCCCHHHHHHHHhcCCCccEEEEEeccCc--cc----ccCcHHHHHHHHHH
Confidence 688999999999999999999888877532 12 12367888887877
No 129
>PF11455 DUF3018: Protein of unknown function (DUF3018); InterPro: IPR021558 This is a bacterial family of uncharacterised proteins.
Probab=38.00 E-value=25 Score=23.68 Aligned_cols=18 Identities=17% Similarity=0.440 Sum_probs=17.0
Q ss_pred hHHHHhcCCCCCceEeec
Q psy8228 106 ECILKRSGFNENAFYFPE 123 (149)
Q Consensus 106 k~~l~~~~~~~~~~y~~~ 123 (149)
|..||.+|+.+-.+|+++
T Consensus 9 R~~lRa~GLRPVqiWVPD 26 (65)
T PF11455_consen 9 RERLRAAGLRPVQIWVPD 26 (65)
T ss_pred HHHHHHcCCCcceeeCCC
Confidence 678999999999999999
No 130
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=37.30 E-value=38 Score=20.93 Aligned_cols=42 Identities=21% Similarity=0.302 Sum_probs=27.9
Q ss_pred hHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE----ecCCHHHHHHHHhc
Q psy8228 8 TSEVEDALSKIVQLKDAAVYGVETSALNTLGVL----KKIKLFQVFTSMKR 54 (149)
Q Consensus 8 p~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A----~~~~~~~L~~~l~~ 54 (149)
...|+++|.++|||..+.|= .. .+.+.. ...+.++|.+.+++
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd----~~-~~~v~v~~~~~~~~~~~i~~~i~~ 58 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVD----LE-TKTVTVTYDPDKTSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEE----TT-TTEEEEEESTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEE----CC-CCEEEEEEecCCCCHHHHHHHHHH
Confidence 35799999999999877542 22 233322 23567888888765
No 131
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=36.74 E-value=1.1e+02 Score=19.16 Aligned_cols=42 Identities=14% Similarity=0.115 Sum_probs=30.0
Q ss_pred hHHHHHHHhcCCCcccEEEEEEEcCCCCeeEEE--ecCCHHHHHHHHhc
Q psy8228 8 TSEVEDALSKIVQLKDAAVYGVETSALNTLGVL--KKIKLFQVFTSMKR 54 (149)
Q Consensus 8 p~EVE~vL~~hP~V~eaaVvGVpd~~~~~~~~A--~~~~~~~L~~~l~~ 54 (149)
..++.+.|.++|+|.+|..+.-. ...++ ...|.+++.+++.+
T Consensus 12 ~~~~~~~l~~~p~V~~~~~vtG~-----~d~~~~v~~~d~~~l~~~i~~ 55 (74)
T PF01037_consen 12 YDEFAEALAEIPEVVECYSVTGE-----YDLILKVRARDMEELEEFIRE 55 (74)
T ss_dssp HHHHHHHHHTSTTEEEEEEESSS-----SSEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEeCC-----CCEEEEEEECCHHHHHHHHHH
Confidence 56889999999999998866221 11333 55688888888766
No 132
>PF10590 PNPOx_C: Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; InterPro: IPR019576 Pyridoxamine 5'-phosphate oxidase (1.4.3.5 from EC) is an enzyme that is involved in the de novo synthesis of pyridoxine (vitamin B6) and pyridoxal phosphate. It oxidizes pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P. The enzyme requires the presence of flavin mononucleotide (FMN) as a cofactor, although there is some evidence that coenzyme F420 may perform this role in some species []. The sequences of the enzyme from bacterial (genes pdxH or fprA) [] and fungal (gene PDX3) [] sources show that this protein has been highly conserved throughout evolution. PdxH is evolutionary related [] to one of the enzymes in the phenazine biosynthesis protein pathway, phzD (also known as phzG). This entry represents one of the two dimerisation regions of the protein, located at the edge of the dimer interface, at the C terminus, being the last three beta strands, S6, S7, and S8 along with the last three residues to the end. In P21159 from SWISSPROT, S6 runs from residues 178-192, S7 from 200-206 and S8 from 211-215. the extended loop, of residues 167-177 may well be involved in the pocket formed between the two dimers that positions the FMN molecule []. ; GO: 0016638 oxidoreductase activity, acting on the CH-NH2 group of donors, 0055114 oxidation-reduction process; PDB: 1WV4_B 1DNL_A 1G76_A 1G79_A 1G77_A 1JNW_A 1G78_A 1TY9_A 1CI0_A 1NRG_A ....
Probab=34.27 E-value=3.3 Score=25.36 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=18.2
Q ss_pred CCeEEechHHHHHHHhcCCCcccEEEEEE
Q psy8228 1 WRGENVATSEVEDALSKIVQLKDAAVYGV 29 (149)
Q Consensus 1 wgGenVsp~EVE~vL~~hP~V~eaaVvGV 29 (149)
|+|+.|-|.+||=--....-..|=.+|-.
T Consensus 1 WgGy~l~P~~iEFWqg~~~RlHdR~~y~r 29 (42)
T PF10590_consen 1 WGGYRLVPEEIEFWQGRPDRLHDRIRYTR 29 (42)
T ss_dssp EEEEEEEECEEEEEEEETTSEEEEEEEEE
T ss_pred CCeEEEEcCEEEEeCCCCCCCEEEEEEEe
Confidence 77888888877755444444555555544
No 133
>cd00495 Ribosomal_L25_TL5_CTC Ribosomal_L25_TL5_CTC: Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain. L25 is a single-domain protein, homologous to the N-terminal domain of TL5 and CTC, which each contain two domains. CTC is a known stress protein, and proteins of this family are believed to have two functions, acting as both ribosomal and stress proteins. In Escherichia coli, cells deleted for L25 were found to be viable; however, these cells grew slowly and had impaired protein synthesis capability. In Bacillus subtilis, CTC is induced under stress conditions and located in the ribosome; it has been proposed that CTC may be necessary for accurate translation under stress conditions. Ribosomal_L25_TL5_CTC is found only in bacteria and some plastids. Due to its limited taxonomic diversity and the viability of cells deleted for L25, this protein is not believed to be necessary for ribosomal assembly. Eukaryotes contain a protein called L25, which is not homologous to bacterial L
Probab=32.48 E-value=35 Score=23.51 Aligned_cols=40 Identities=20% Similarity=0.062 Sum_probs=28.8
Q ss_pred ecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCCceEeecCCCceeeCC
Q psy8228 73 WKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNENAFYFPEEPGILIGMI 132 (149)
Q Consensus 73 vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~y~~~~~~~y~~~~ 132 (149)
+...+|+.+||-. -+.||++|+=|.-+|=......-+-+.
T Consensus 3 l~a~~R~~~gk~~--------------------~r~lR~~G~iPavvYG~~~~~~~i~v~ 42 (91)
T cd00495 3 LKAEKREETGKGA--------------------SRRLRRAGKVPAVIYGKGKEPISISVD 42 (91)
T ss_pred EEEEEcccCCChH--------------------HHHHHHCCCCCEEEECCCCCCEEEEEc
Confidence 3456888889988 899999998888778765333434443
No 134
>PRK05943 50S ribosomal protein L25; Reviewed
Probab=31.84 E-value=34 Score=23.91 Aligned_cols=31 Identities=16% Similarity=-0.020 Sum_probs=25.6
Q ss_pred ecccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCCceEeec
Q psy8228 73 WKNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNENAFYFPE 123 (149)
Q Consensus 73 vd~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~y~~~ 123 (149)
+...+|+..||-. -+.||++|+=|.-+|=..
T Consensus 4 l~a~~R~~~gk~~--------------------~r~lR~~G~vPaViYG~~ 34 (94)
T PRK05943 4 INAEVRPEQGKGA--------------------SRRLRRAGKFPAIIYGGN 34 (94)
T ss_pred EEEEEeCcCCChH--------------------HHHHHHCCCCCEEEECCC
Confidence 4567888899988 899999999888777665
No 135
>PHA00691 hypothetical protein
Probab=27.61 E-value=45 Score=22.18 Aligned_cols=16 Identities=0% Similarity=0.079 Sum_probs=13.2
Q ss_pred CceEeecCCCceeeCC
Q psy8228 117 NAFYFPEEPGILIGMI 132 (149)
Q Consensus 117 ~~~y~~~~~~~y~~~~ 132 (149)
.++|++++.|.|.-|.
T Consensus 13 Gr~WVL~K~~~Y~V~v 28 (68)
T PHA00691 13 GRVWVLKKSDSYTVFV 28 (68)
T ss_pred CeEEEEEeCCcEEEEE
Confidence 3899999889998764
No 136
>PF01386 Ribosomal_L25p: Ribosomal L25p family; InterPro: IPR020055 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry models the short-form of the ribosomal L25 protein. The long-form has homology to the general stress protein Ctc of Bacillus subtilis, a mesophile, and ribosomal protein TL5 of Thermus thermophilus, a thermophile. Ribosomal protein L25 of Escherichia coli and Haemophilus influenzae appear to be orthologous but consist only of the N-terminal half of Ctc and TL5. Both short (L25-like) and full-length (CTC-like) members of this family bind the E-loop of bacterial 5S rRNA.; GO: 0003735 structural constituent of ribosome, 0008097 5S rRNA binding, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2HGQ_Y 2HGJ_Y 2Y19_Z 2WRL_Z 3KIT_Z 2WH2_Z 2WDN_Z 3V25_Z 3HUZ_Z 3KIY_Z ....
Probab=26.63 E-value=29 Score=23.94 Aligned_cols=39 Identities=21% Similarity=0.093 Sum_probs=27.3
Q ss_pred cccCCCCCCccccCCCCCCCCccccccchhhhhHHHHhcCCCCCceEeecCCCceeeCC
Q psy8228 74 KNWTLVDVFKTQVAKHPNKPALKHDEQTMSFQECILKRSGFNENAFYFPEEPGILIGMI 132 (149)
Q Consensus 74 d~lP~T~tGKi~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~y~~~~~~~y~~~~ 132 (149)
..-+|+.+||-. -+.||++|+=|.-+|=......-+-++
T Consensus 2 ~a~~R~~~gk~~--------------------~r~LR~~G~iPaviYG~~~~~~~i~v~ 40 (88)
T PF01386_consen 2 KAEKREETGKSA--------------------ARRLRREGKIPAVIYGKGKESIPISVD 40 (88)
T ss_dssp EEEESSSTSSSH--------------------HHHHHHTTEEEEEEEESSEEEEEEEEE
T ss_pred eEEEcCcCCCHH--------------------HHHHHHcCCceEEEECCCCCCEEEEEe
Confidence 345788899988 899999998877777666323333333
No 137
>PRK05934 type III secretion system protein; Validated
Probab=25.31 E-value=1.5e+02 Score=25.96 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=42.8
Q ss_pred HHHHHHHhcCCCcccEEE-EEEEcCCCCee-EEE---------ecCCHH---HHHHHHhccccccCCCCCCceeEEEEec
Q psy8228 9 SEVEDALSKIVQLKDAAV-YGVETSALNTL-GVL---------KKIKLF---QVFTSMKRQQCIRAFLTYKFIMAIWLWK 74 (149)
Q Consensus 9 ~EVE~vL~~hP~V~eaaV-vGVpd~~~~~~-~~A---------~~~~~~---~L~~~l~~~~~~~~L~~ykvP~~v~~vd 74 (149)
.|+++.|.+.++|++|-| ++.|.++..+. +-| ..++.+ .|...+.. .+|.-. |..|.++|
T Consensus 74 GELaRTIesld~VesARVHLAlPe~s~~~~~pTASVvLtL~~G~tLs~~QV~gIvnLVAs-----SVpGLt-pEnVTVVD 147 (341)
T PRK05934 74 EQLEKDLTMFHPVAQATVALSLETEDDPMSPAEISVILSLPKAETLSPSLLHSITDYLTS-----SVPGLT-KEHITLSD 147 (341)
T ss_pred HHHHHHHHcccCcceeEEEEeCCCCCccCCCCceEEEEecCCCCcCCHHHHHHHHHHHHh-----cCCCCC-ccCeEEEC
Confidence 588999999999999998 78887653322 222 245654 45566666 665544 88999998
Q ss_pred c
Q psy8228 75 N 75 (149)
Q Consensus 75 ~ 75 (149)
+
T Consensus 148 q 148 (341)
T PRK05934 148 N 148 (341)
T ss_pred C
Confidence 5
No 138
>PF06092 DUF943: Enterobacterial putative membrane protein (DUF943); InterPro: IPR010351 This family consists of several hypothetical proteins from Escherichia coli, Yersinia pestis and Salmonella typhi.
Probab=24.10 E-value=1e+02 Score=24.04 Aligned_cols=15 Identities=40% Similarity=0.359 Sum_probs=13.3
Q ss_pred EEecccCCCCCCccc
Q psy8228 71 WLWKNWTLVDVFKTQ 85 (149)
Q Consensus 71 ~~vd~lP~T~tGKi~ 85 (149)
.+|+.+|.|.+|||.
T Consensus 44 IlV~~~P~Td~gKI~ 58 (157)
T PF06092_consen 44 ILVKNFPLTDSGKIN 58 (157)
T ss_pred eeeecCCCCccchhh
Confidence 577899999999995
No 139
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=22.89 E-value=85 Score=23.79 Aligned_cols=22 Identities=18% Similarity=0.324 Sum_probs=19.2
Q ss_pred hHHHHHHHhcCCCcccEEEEEE
Q psy8228 8 TSEVEDALSKIVQLKDAAVYGV 29 (149)
Q Consensus 8 p~EVE~vL~~hP~V~eaaVvGV 29 (149)
..+|++.+.+.|+|.+|.|+-.
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~ 98 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVT 98 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEE
Confidence 4578999999999999999866
No 140
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=22.21 E-value=57 Score=26.29 Aligned_cols=36 Identities=28% Similarity=0.542 Sum_probs=31.4
Q ss_pred cccccchhhhhHHHHhcCCCCC---ceEeecCCCceeeC
Q psy8228 96 KHDEQTMSFQECILKRSGFNEN---AFYFPEEPGILIGM 131 (149)
Q Consensus 96 ~~~~~~~~~~k~~l~~~~~~~~---~~y~~~~~~~y~~~ 131 (149)
+|++..|..++..|.+.+...+ ++++-.++|.|.++
T Consensus 36 ~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGl 74 (220)
T COG1214 36 NHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGL 74 (220)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccch
Confidence 4799999999999999998765 88888899999874
No 141
>PF08478 POTRA_1: POTRA domain, FtsQ-type; InterPro: IPR013685 FtsQ/DivIB bacterial division proteins (IPR005548 from INTERPRO) contain an N-terminal POTRA domain (for polypeptide-transport-associated domain). This is found in different types of proteins, usually associated with a transmembrane beta-barrel. FtsQ/DivIB may have chaperone-like roles, which has also been postulated for the POTRA domain in other contexts []. ; PDB: 2ALJ_A 2VH1_B 3J00_Z 2VH2_B.
Probab=22.09 E-value=35 Score=21.54 Aligned_cols=23 Identities=22% Similarity=0.339 Sum_probs=20.0
Q ss_pred EechHHHHHHHhcCCCcccEEEE
Q psy8228 5 NVATSEVEDALSKIVQLKDAAVY 27 (149)
Q Consensus 5 nVsp~EVE~vL~~hP~V~eaaVv 27 (149)
.+++.++++.|.++|.|++|.|-
T Consensus 33 ~~~~~~~~~~l~~~p~V~~v~V~ 55 (69)
T PF08478_consen 33 SLDLKKIEQRLEKLPWVKSVSVS 55 (69)
T ss_dssp CSHHHHHHHCCCCTTTEEEEEEE
T ss_pred EECHHHHHHHHHcCCCEEEEEEE
Confidence 46788899999999999999875
No 142
>PRK15348 type III secretion system lipoprotein SsaJ; Provisional
Probab=21.85 E-value=2.6e+02 Score=23.33 Aligned_cols=61 Identities=11% Similarity=0.137 Sum_probs=39.6
Q ss_pred HHHHHHHhcCCCcccEEE-EEEEcCCCCee---EEE-------ecCCHH----HHHHHHhccccccCCCCCCceeEEEEe
Q psy8228 9 SEVEDALSKIVQLKDAAV-YGVETSALNTL---GVL-------KKIKLF----QVFTSMKRQQCIRAFLTYKFIMAIWLW 73 (149)
Q Consensus 9 ~EVE~vL~~hP~V~eaaV-vGVpd~~~~~~---~~A-------~~~~~~----~L~~~l~~~~~~~~L~~ykvP~~v~~v 73 (149)
.|+|+.|.+.++|.+|-| +..|+...... .-| ...+.+ .|+..+.. ..|.-+ |..|.++
T Consensus 110 gELarTI~~idgV~~ArVhL~lP~~~~~~~~~~asASV~I~~~~~~~~~~~~v~I~~LVA~-----SV~gL~-~enVTVv 183 (249)
T PRK15348 110 QRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEM-----SIPGLQ-YSKISIL 183 (249)
T ss_pred HHHHHHHHhCCCeeEeEEEEECCCCCcccCCCCccEEEEEEeCCCCChHHHHHHHHHHHHH-----hcCCCC-ccceEEE
Confidence 679999999999999998 67775443221 222 222222 56666666 676665 6777777
Q ss_pred cc
Q psy8228 74 KN 75 (149)
Q Consensus 74 d~ 75 (149)
+.
T Consensus 184 d~ 185 (249)
T PRK15348 184 MQ 185 (249)
T ss_pred ec
Confidence 63
No 143
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=21.73 E-value=2.8e+02 Score=20.80 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=18.9
Q ss_pred EEechHHHHHHHhcCCCcccEEEEEE
Q psy8228 4 ENVATSEVEDALSKIVQLKDAAVYGV 29 (149)
Q Consensus 4 enVsp~EVE~vL~~hP~V~eaaVvGV 29 (149)
.|+++.|+|.+|..-| |+.|||-
T Consensus 47 Hkl~~eEle~~lee~~---E~ivvGT 69 (121)
T COG1504 47 HKLALEELEELLEEGP---EVIVVGT 69 (121)
T ss_pred cccCHHHHHHHHhcCC---cEEEEec
Confidence 7999999999999776 4567765
No 144
>PF01883 DUF59: Domain of unknown function DUF59; InterPro: IPR002744 This family includes prokaryotic proteins of unknown function. The family also includes PhaH (O84984 from SWISSPROT) from Pseudomonas putida. PhaH forms a complex with PhaF (O84982 from SWISSPROT), PhaG (O84983 from SWISSPROT) and PhaI (O84985 from SWISSPROT), which hydroxylates phenylacetic acid to 2-hydroxyphenylacetic acid []. So members of this family may all be components of ring hydroxylating complexes.; PDB: 3LNO_C 3CQ3_A 3CQ2_D 2CU6_B 3CQ1_A 3UX3_B 3UX2_A 1WCJ_A 1UWD_A.
Probab=20.81 E-value=1.1e+02 Score=19.66 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=14.5
Q ss_pred HHHHHHHhcCCCcccEEE
Q psy8228 9 SEVEDALSKIVQLKDAAV 26 (149)
Q Consensus 9 ~EVE~vL~~hP~V~eaaV 26 (149)
.+|++.|.+.|+|.++-|
T Consensus 55 ~~i~~~l~~l~gv~~V~V 72 (72)
T PF01883_consen 55 EEIREALKALPGVKSVKV 72 (72)
T ss_dssp HHHHHHHHTSTT-SEEEE
T ss_pred HHHHHHHHhCCCCceEeC
Confidence 589999999999988754
No 145
>COG4472 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.63 E-value=58 Score=22.99 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=27.4
Q ss_pred HHHHhcCCCCC-ce--EeecCCCceeeCCHHHHHhh
Q psy8228 107 CILKRSGFNEN-AF--YFPEEPGILIGMIKESRAES 139 (149)
Q Consensus 107 ~~l~~~~~~~~-~~--y~~~~~~~y~~~~~~~~~~~ 139 (149)
+.|.+.|+|+- ++ |++.++-.|+|=-+++|+.|
T Consensus 29 ~sL~ekGYNpiNQiVGYllSGDPaYIpr~ndARn~I 64 (88)
T COG4472 29 NSLEEKGYNPINQIVGYLLSGDPAYIPRYNDARNQI 64 (88)
T ss_pred HHHHHcCCChHHHHHhhhccCCccccCccccHHHHH
Confidence 67889999986 44 99998889999888888765
No 146
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=20.55 E-value=78 Score=22.10 Aligned_cols=36 Identities=17% Similarity=0.162 Sum_probs=28.3
Q ss_pred hhhHHHHhcCCCCC-ce--EeecCCCceeeCCHHHHHhh
Q psy8228 104 FQECILKRSGFNEN-AF--YFPEEPGILIGMIKESRAES 139 (149)
Q Consensus 104 ~~k~~l~~~~~~~~-~~--y~~~~~~~y~~~~~~~~~~~ 139 (149)
-.-..|++.||||- ++ |++.++-.|++=.+.+|.-|
T Consensus 23 ~Vy~AL~EKGYnPinQivGYllSGDPaYItsh~nAR~lI 61 (79)
T PF06135_consen 23 QVYAALEEKGYNPINQIVGYLLSGDPAYITSHNNARNLI 61 (79)
T ss_pred HHHHHHHHcCCChHHHHHhheecCCCccccCcccHHHHH
Confidence 33467999999987 44 99998789999887777655
Done!