BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8230
(251 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NQX3|GEPH_HUMAN Gephyrin OS=Homo sapiens GN=GPHN PE=1 SV=1
Length = 736
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 121/214 (56%), Gaps = 44/214 (20%)
Query: 27 LSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAGKRKVVGERSAG--PVKSAS 84
++ R G ++A+ AKD+LPPF AS+KDGYAV A+DG G R ++GE AG P ++
Sbjct: 345 INYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVM 404
Query: 85 PLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDG--EEVEIKILKTPTKGQDIRVKD 142
P Q R+ TGAPIP GAD+VVQVEDTEL + D EE+E++IL GQDIR
Sbjct: 405 P---GQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIR--- 458
Query: 143 SVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPELGL 202
P G DI++G +L +G +GP E+GL
Sbjct: 459 --------------------------PI--------GHDIKRGECVLAKGTHMGPSEIGL 484
Query: 203 LASVGVTSITVYKKPIIHILSTGNELDEPDAHVL 236
LA+VGVT + V K P++ ++STGNEL P+ +L
Sbjct: 485 LATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLL 518
>sp|Q03555|GEPH_RAT Gephyrin OS=Rattus norvegicus GN=Gphn PE=1 SV=3
Length = 768
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 121/214 (56%), Gaps = 44/214 (20%)
Query: 27 LSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAGKRKVVGERSAG--PVKSAS 84
++ R G ++A+ AKD+LPPF AS+KDGYAV A+DG G R ++GE AG P ++
Sbjct: 377 INYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVM 436
Query: 85 PLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDG--EEVEIKILKTPTKGQDIRVKD 142
P Q R+ TGAPIP GAD+VVQVEDTEL + D EE+E++IL GQDIR
Sbjct: 437 P---GQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIR--- 490
Query: 143 SVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPELGL 202
P G DI++G +L +G +GP E+GL
Sbjct: 491 --------------------------PI--------GHDIKRGECVLAKGTHMGPSEIGL 516
Query: 203 LASVGVTSITVYKKPIIHILSTGNELDEPDAHVL 236
LA+VGVT + V K P++ ++STGNEL P+ +L
Sbjct: 517 LATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLL 550
>sp|Q8BUV3|GEPH_MOUSE Gephyrin OS=Mus musculus GN=Gphn PE=1 SV=2
Length = 769
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 121/214 (56%), Gaps = 44/214 (20%)
Query: 27 LSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAGKRKVVGERSAG--PVKSAS 84
++ R G ++A+ AKD+LPPF AS+KDGYAV A+DG G R ++GE AG P ++
Sbjct: 378 INYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVM 437
Query: 85 PLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDG--EEVEIKILKTPTKGQDIRVKD 142
P Q R+ TGAPIP GAD+VVQVEDTEL + D EE+E++IL GQDIR
Sbjct: 438 P---GQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIR--- 491
Query: 143 SVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPELGL 202
P G DI++G +L +G +GP E+GL
Sbjct: 492 --------------------------PI--------GHDIKRGECVLAKGTHMGPSEIGL 517
Query: 203 LASVGVTSITVYKKPIIHILSTGNELDEPDAHVL 236
LA+VGVT + V K P++ ++STGNEL P+ +L
Sbjct: 518 LATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLL 551
>sp|Q9PW38|GEPH_CHICK Gephyrin OS=Gallus gallus GN=GPHN PE=1 SV=1
Length = 736
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 120/214 (56%), Gaps = 44/214 (20%)
Query: 27 LSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAGKRKVVGERSAG--PVKSAS 84
++ R G ++A+ AKD+LPPF AS+KDGYAV A+DG G R ++GE AG P ++
Sbjct: 345 INYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVM 404
Query: 85 PLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDG--EEVEIKILKTPTKGQDIRVKD 142
P Q R+ TGAPIP GAD+VVQVEDTEL + D EE+E++IL GQDIR
Sbjct: 405 P---GQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIR--- 458
Query: 143 SVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPELGL 202
P G DI++G +L +G GP E+GL
Sbjct: 459 --------------------------PI--------GHDIKRGECVLAKGTHTGPSEVGL 484
Query: 203 LASVGVTSITVYKKPIIHILSTGNELDEPDAHVL 236
LA+VGVT + V K P++ ++STGNEL P+ VL
Sbjct: 485 LATVGVTEVEVNKFPVVAVMSTGNELLNPEDDVL 518
>sp|Q39054|CNX1_ARATH Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana
GN=CNX1 PE=1 SV=2
Length = 670
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 107/210 (50%), Gaps = 37/210 (17%)
Query: 27 LSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAGKRKVVGERSAGPVKSASPL 86
+S +A G ++AE A D LPP+ AS+KDGYAV+ASDG G+ V+ E AG +
Sbjct: 38 VSLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVVASDGPGEYPVITESRAGNDGLGVTV 97
Query: 87 KSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVKDSVVQ 146
+ TG PIP GAD+VVQVEDT++ E +KIL KG DIR
Sbjct: 98 TPGTVAYVTTGGPIPDGADAVVQVEDTKVIGDVSTESKRVKILIQTKKGTDIR------- 150
Query: 147 VEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPELGLLASV 206
RV G DI K AT+L G IG E+GLLA+
Sbjct: 151 -----------------------------RV-GCDIEKDATVLTTGERIGASEIGLLATA 180
Query: 207 GVTSITVYKKPIIHILSTGNELDEPDAHVL 236
GVT + VY PI+ ILSTG+EL EP A L
Sbjct: 181 GVTMVKVYPMPIVAILSTGDELVEPTAGTL 210
>sp|Q54KM0|GEPH_DICDI Gephyrin OS=Dictyostelium discoideum GN=gphn PE=3 SV=1
Length = 718
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 114/244 (46%), Gaps = 58/244 (23%)
Query: 1 MLEVEAAQKLILDFIETNKCGQQKQSLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAV 60
M V+ A K+IL+ + + + + + ++ G I+ E + + P F ASIKDGYA+
Sbjct: 267 MTPVDEAIKIILE--QCDNINNELEKVEITKSLGRILGEDISSVEPFPNFRASIKDGYAI 324
Query: 61 IASDGAGKRKVVGERSAG-------PVKSASPLKS-------SQCYRINTGAPIPPGADS 106
+ DG GK +++G+ AG P + P S C RI TGA IP G DS
Sbjct: 325 RSKDGIGKYRLLGDSVAGNTGENLIPPQPQQPTNSINDDDNEKYCVRITTGAKIPDGYDS 384
Query: 107 VVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVKDSVVQVEDTELTKGKDGEEVEIKIL 166
V V +E+TE+ G++ +E+
Sbjct: 385 V-------------------------------------VMIEETEMI-GENMVSIEV--- 403
Query: 167 KTPTKGQDIRVKGIDIRKGATILEEGNLIGPPELGLLASVGVTSITVYKKPIIHILSTGN 226
T GQDIR G DI G +L +G+ IG E+GLLA++G+ + K P I I+STG+
Sbjct: 404 -TCKPGQDIREIGSDIASGTIVLNKGDKIGCAEIGLLATLGIQWVHCPKLPSISIISTGD 462
Query: 227 ELDE 230
EL +
Sbjct: 463 ELTD 466
>sp|P39205|CIN_DROME Molybdenum cofactor synthesis protein cinnamon OS=Drosophila
melanogaster GN=cin PE=1 SV=3
Length = 601
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 46 DLPPFDASIKDGYAVIASDGAGKRKVVGERSAGPVKSASPLKSSQCYRINTGAPIPPGAD 105
++PPF ASIKDGYA+ ++ +G ++V+G +AG ++ PL +CY+INTGAP+P AD
Sbjct: 230 NIPPFRASIKDGYAMKSTGFSGTKRVLGCIAAGDSPNSLPLAEDECYKINTGAPLPLEAD 289
Query: 106 SVVQVEDTELSK-GKDGEEVEIKILKTPTKGQDIR 139
VVQVEDT+L + K+G+E + IL P G D+R
Sbjct: 290 CVVQVEDTKLLQLDKNGQESLVDILVEPQAGLDVR 324
>sp|P45210|MOEA_HAEIN Molybdopterin molybdenumtransferase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=moeA PE=3
SV=1
Length = 404
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 98/211 (46%), Gaps = 47/211 (22%)
Query: 23 QKQSLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASD--GAGKRKVVGERSAG-P 79
Q + L+ ++A I AE ++ ++P FD S DGYAV SD + V G+ AG P
Sbjct: 20 QTEYLNLQEAANRICAEDIISPINVPSFDNSAMDGYAVRLSDLQQSLTLSVAGKSFAGNP 79
Query: 80 VKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIR 139
+ P KS+ RI TGA IP G D+V+ E
Sbjct: 80 FQEEWPSKSA--VRIMTGAMIPEGTDAVIMQE---------------------------- 109
Query: 140 VKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPE 199
++T +DG I + P Q+IR G D++KG +LE+G + P
Sbjct: 110 -----------QVTLNEDG---TITFSELPKPNQNIRRIGEDVKKGDVVLEQGAQLTPVS 155
Query: 200 LGLLASVGVTSITVYKKPIIHILSTGNELDE 230
L LLAS+G+ + Y++ + +LSTG+EL E
Sbjct: 156 LPLLASLGIAEVKCYRQLKVGVLSTGDELVE 186
>sp|Q58296|Y886_METJA Putative molybdopterin biosynthesis protein MJ0886
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0886
PE=3 SV=1
Length = 620
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 53/239 (22%)
Query: 4 VEAAQKLILDFIETNKCGQQKQSLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIAS 63
+E A+ +I + ++ K + + + A G ++AE + D+PP+D + DGYAV A
Sbjct: 10 IEEAKSIINESLK--KLKNEVEEVDLFNAIGRVLAEDVFSNIDIPPYDRAKMDGYAVKAE 67
Query: 64 D-------GAGKRKVVGERSAGPVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELS 116
D + KV+G AG +K + + +C I TGA IP GA++VV V
Sbjct: 68 DTYEADEDNPVELKVIGSLKAGEIKDLE-INNGECVEIATGAIIPKGANAVVMV------ 120
Query: 117 KGKDGEEVEIKILKTPTKGQDIRVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIR 176
E TE +D + V KI + ++I+
Sbjct: 121 -------------------------------EYTE----RDNDRV--KIYRAVPPMENIQ 143
Query: 177 VKGIDIRKGATILEEGNLIGPPELGLLASVGVTSITVYKKPIIHILSTGNELDEPDAHV 235
G DI G +L + + P ++G+LA++G + + VYKK I+STGNE+ P+ +
Sbjct: 144 FTGSDIMAGELVLRKNTKLTPRDIGVLAAIGKSKVKVYKKLKFGIISTGNEIISPNEQL 202
>sp|P12281|MOEA_ECOLI Molybdopterin molybdenumtransferase OS=Escherichia coli (strain
K12) GN=moeA PE=1 SV=1
Length = 411
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 48/211 (22%)
Query: 24 KQSLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAGKRK--VVGERSAG-PV 80
+++L Q G I+A V+ D+P FD S DGYAV +D A + V G+ AG P
Sbjct: 27 QETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPY 86
Query: 81 KSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRV 140
P + C RI TGAP+P G ++VV E TE
Sbjct: 87 HGEWP--AGTCIRIMTGAPVPEGCEAVVMQEQTE-------------------------- 118
Query: 141 KDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL 200
++ G ++ GQ+IR +G DI GA + G + EL
Sbjct: 119 ----------QMDNG-------VRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAEL 161
Query: 201 GLLASVGVTSITVYKKPIIHILSTGNELDEP 231
++AS+G+ + V +K + + STG+EL P
Sbjct: 162 PVIASLGIAEVPVIRKVRVALFSTGDELQLP 192
>sp|Q5HDT4|MOEA_STAAC Molybdopterin molybdenumtransferase OS=Staphylococcus aureus
(strain COL) GN=moeA PE=3 SV=1
Length = 419
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 51/210 (24%)
Query: 26 SLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------KRKVVGERSAG 78
+++ ++ +I+AE VA D+P FD S DG+A+ + D G + KV+ AG
Sbjct: 29 TVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAG 88
Query: 79 PVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDI 138
V S + + RI TGA IP GAD+VV E T
Sbjct: 89 SV-SDKLVGDHEAVRIMTGAQIPNGADAVVMFEQT------------------------- 122
Query: 139 RVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPP 198
+++EDT I K +K ++I +KG + + G +L++G +I P
Sbjct: 123 ------IELEDT------------FTIRKPFSKNENISLKGEETKTGDVVLKKGQVINPG 164
Query: 199 ELGLLASVGVTSITVYKKPIIHILSTGNEL 228
+ +LA+ G + V K+P + +++TG+EL
Sbjct: 165 AIAVLATYGYAEVKVIKQPSVAVIATGSEL 194
>sp|P99139|MOEA_STAAN Molybdopterin molybdenumtransferase OS=Staphylococcus aureus
(strain N315) GN=moeA PE=1 SV=1
Length = 419
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 51/210 (24%)
Query: 26 SLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------KRKVVGERSAG 78
+++ ++ +I+AE VA D+P FD S DG+A+ + D G + KV+ AG
Sbjct: 29 TVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAG 88
Query: 79 PVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDI 138
V S + + RI TGA IP GAD+VV E T
Sbjct: 89 SV-SDKLVGDHEAVRIMTGAQIPNGADAVVMFEQT------------------------- 122
Query: 139 RVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPP 198
+++EDT I K +K ++I +KG + + G +L++G +I P
Sbjct: 123 ------IELEDT------------FTIRKPFSKNENISLKGEETKTGDVVLKKGQVINPG 164
Query: 199 ELGLLASVGVTSITVYKKPIIHILSTGNEL 228
+ +LA+ G + V K+P + +++TG+EL
Sbjct: 165 AIAVLATYGYAEVKVIKQPSVAVIATGSEL 194
>sp|P65407|MOEA_STAAM Molybdopterin molybdenumtransferase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=moeA PE=1 SV=1
Length = 419
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 51/210 (24%)
Query: 26 SLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------KRKVVGERSAG 78
+++ ++ +I+AE VA D+P FD S DG+A+ + D G + KV+ AG
Sbjct: 29 TVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAG 88
Query: 79 PVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDI 138
V S + + RI TGA IP GAD+VV E T
Sbjct: 89 SV-SDKLVGDHEAVRIMTGAQIPNGADAVVMFEQT------------------------- 122
Query: 139 RVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPP 198
+++EDT I K +K ++I +KG + + G +L++G +I P
Sbjct: 123 ------IELEDT------------FTIRKPFSKNENISLKGEETKTGDVVLKKGQVINPG 164
Query: 199 ELGLLASVGVTSITVYKKPIIHILSTGNEL 228
+ +LA+ G + V K+P + +++TG+EL
Sbjct: 165 AIAVLATYGYAEVKVIKQPSVAVIATGSEL 194
>sp|Q8NVA1|MOEA_STAAW Molybdopterin molybdenumtransferase OS=Staphylococcus aureus
(strain MW2) GN=moeA PE=3 SV=1
Length = 419
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 26 SLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------KRKVVGERSAG 78
+++ ++ +I+AE VA D+P FD S DG+A+ + D G + KV+ AG
Sbjct: 29 TVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAG 88
Query: 79 PVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDI 138
V S + + RI TGA IP GAD+VV E T
Sbjct: 89 SV-SDKLVGDHEAVRIMTGAQIPNGADAVVMFEQT------------------------- 122
Query: 139 RVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPP 198
+++EDT I K +K ++I +KG + G +L++G +I P
Sbjct: 123 ------IELEDT------------FTIRKPFSKNENISLKGEETTTGDVVLKKGQVINPG 164
Query: 199 ELGLLASVGVTSITVYKKPIIHILSTGNEL 228
+ +LA+ G + V K+P + +++TG+EL
Sbjct: 165 AIAVLATYGYAEVKVIKQPSVAVIATGSEL 194
>sp|Q6G749|MOEA_STAAS Molybdopterin molybdenumtransferase OS=Staphylococcus aureus
(strain MSSA476) GN=moeA PE=3 SV=1
Length = 419
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 26 SLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------KRKVVGERSAG 78
+++ ++ +I+AE VA D+P FD S DG+A+ + D G + KV+ AG
Sbjct: 29 TVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAG 88
Query: 79 PVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDI 138
V S + + RI TGA IP GAD+VV E T
Sbjct: 89 SV-SDKLVGDHEAVRIMTGAQIPNGADAVVMFEQT------------------------- 122
Query: 139 RVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPP 198
+++EDT I K +K ++I +KG + G +L++G +I P
Sbjct: 123 ------IELEDT------------FTIRKPFSKNENISLKGEETTTGDVVLKKGQVINPG 164
Query: 199 ELGLLASVGVTSITVYKKPIIHILSTGNEL 228
+ +LA+ G + V K+P + +++TG+EL
Sbjct: 165 AIAVLATYGYAEVKVIKQPSVAVIATGSEL 194
>sp|Q6GEG1|MOEA_STAAR Molybdopterin molybdenumtransferase OS=Staphylococcus aureus
(strain MRSA252) GN=moeA PE=3 SV=1
Length = 419
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 26 SLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------KRKVVGERSAG 78
+++ ++ +I+AE VA D+P FD S DG+A+ + D G + KV+ AG
Sbjct: 29 TVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAG 88
Query: 79 PVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDI 138
V S + + RI TGA IP GAD+VV E T
Sbjct: 89 SV-SDKLVGDHEAVRIMTGAQIPNGADAVVMFEQT------------------------- 122
Query: 139 RVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPP 198
+++EDT I K +K ++I +KG + G +L++G +I P
Sbjct: 123 ------IELEDT------------FTIRKPFSKNENISLKGEETTTGDVVLKKGQVINPG 164
Query: 199 ELGLLASVGVTSITVYKKPIIHILSTGNEL 228
+ +LA+ G + V K+P + +++TG+EL
Sbjct: 165 AIAVLATYGYAEVKVIKQPSVAVIATGSEL 194
>sp|Q56066|MOEA_SALTY Molybdopterin molybdenumtransferase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=moeA PE=3 SV=2
Length = 413
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 91/210 (43%), Gaps = 48/210 (22%)
Query: 25 QSLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAGKRK--VVGERSAG-PVK 81
++L G I+A V+ D+P FD S DGYAV +D + + V G+ AG P +
Sbjct: 30 ETLPLVNCFGRILATDIVSPLDVPGFDNSAMDGYAVRVADLSADKPLPVAGKAFAGQPYQ 89
Query: 82 SASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVK 141
P + C RI TGAP+P G ++VV E TE + DG ++ GQ+I
Sbjct: 90 GEWP--AGTCIRIMTGAPVPAGCEAVVMQEQTE--QTDDG----VRFTADVRCGQNI--- 138
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPELG 201
R +G DIR+ A + G + EL
Sbjct: 139 ----------------------------------RRRGEDIRQDAVVFPAGTRLTTAELP 164
Query: 202 LLASVGVTSITVYKKPIIHILSTGNELDEP 231
+LAS+G+ V +K + + STG+EL P
Sbjct: 165 VLASLGIADAQVVRKVRVALFSTGDELQLP 194
>sp|O31703|MOEA_BACSU Molybdopterin molybdenumtransferase OS=Bacillus subtilis (strain
168) GN=moeA PE=3 SV=1
Length = 430
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 91/220 (41%), Gaps = 51/220 (23%)
Query: 20 CGQQKQ----SLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------K 68
C QKQ ++ + +AE A +P FD S DG+AV A D A +
Sbjct: 18 CHFQKQGETEWVALEDSLHRFLAEDITADHHVPAFDRSPYDGFAVRACDTAEASRENPVR 77
Query: 69 RKVVGERSAGPVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKI 128
+V+ AG V S L Q RI TGA IP GAD+VV +E T+ + + +K
Sbjct: 78 FEVIDHIGAGAV-SEKELGPFQAVRIMTGAQIPEGADAVVMIELTQAFEENGKSFMSLK- 135
Query: 129 LKTPTKGQDIRVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATI 188
+ G +I G D +KG+ +
Sbjct: 136 --------------------------------------RRFQTGDNISKTGEDAQKGSVL 157
Query: 189 LEEGNLIGPPELGLLASVGVTSITVYKKPIIHILSTGNEL 228
L +G + P LLA+ G S+ V +KP++ I++TG EL
Sbjct: 158 LTKGTRVTPGVTALLATFGYASVPVVRKPVVGIIATGTEL 197
>sp|Q8CNE1|MOEA_STAES Molybdopterin molybdenumtransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=moeA PE=3 SV=1
Length = 419
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 51/208 (24%)
Query: 26 SLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------KRKVVGERSAG 78
+++ ++ G+I+AE VA D+P F+ S DG+A+ + D G + +V+ AG
Sbjct: 29 NINLDESLGHILAEDIVATYDIPRFNKSPYDGFAIRSEDSQGASGENRIEFEVIDHIGAG 88
Query: 79 PVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDI 138
V S + +Q RI TGA IP GAD+VV E T S
Sbjct: 89 SV-SEKTIDKNQAIRIMTGAQIPSGADAVVMFEQTIES---------------------- 125
Query: 139 RVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPP 198
E I K+ ++I ++G +I+ G +L +G I
Sbjct: 126 ---------------------ETTFTIRKSFKHLENISLQGEEIKAGDIVLHKGMRINSG 164
Query: 199 ELGLLASVGVTSITVYKKPIIHILSTGN 226
+ +LA+ G T + V +KP + +++TG+
Sbjct: 165 VIAVLATYGYTKVRVARKPTVAVIATGS 192
>sp|Q5HLX6|MOEA_STAEQ Molybdopterin molybdenumtransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=moeA PE=3 SV=1
Length = 419
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 51/208 (24%)
Query: 26 SLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------KRKVVGERSAG 78
+++ ++ G+I+AE VA D+P F+ S DG+A+ + D G + +V+ AG
Sbjct: 29 NINLDESLGHILAEDIVATYDIPRFNKSPYDGFAIRSEDSQGASGENRIEFEVIDHIGAG 88
Query: 79 PVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDI 138
V S + +Q RI TGA IP GAD+VV E T S
Sbjct: 89 SV-SEKTIDKNQAIRIMTGAQIPSGADAVVMFEQTIES---------------------- 125
Query: 139 RVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPP 198
E I K+ ++I ++G +I+ G +L +G I
Sbjct: 126 ---------------------ETTFTIRKSFKHLENISLQGEEIKAGDIVLHKGMRINSG 164
Query: 199 ELGLLASVGVTSITVYKKPIIHILSTGN 226
+ +LA+ G T + V +KP + +++TG+
Sbjct: 165 VIAVLATYGYTKVRVARKPTVAVIATGS 192
>sp|O05577|MOEA1_MYCTU Molybdopterin molybdenumtransferase 1 OS=Mycobacterium tuberculosis
GN=moeA1 PE=3 SV=1
Length = 426
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 66/220 (30%)
Query: 31 QAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG----------------------K 68
+A G + AE V + +P FD + DGYAV + D AG
Sbjct: 27 EAQGLMCAEEVVTERPMPGFDQAAIDGYAVRSVDVAGVGDTGGVQVFADHGDLDGRDVLT 86
Query: 69 RKVVGERSAGPVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKI 128
V+G AG ++ S L+ Q R+ TGAP+P AD+V+ + T
Sbjct: 87 LPVMGTIEAG-ARTLSRLQPRQAVRVQTGAPLPTLADAVLPLRWT--------------- 130
Query: 129 LKTPTKGQDIRVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATI 188
DG +++L+ G +R G D++ G
Sbjct: 131 ----------------------------DGGMSRVRVLRGAPSGAYVRRAGDDVQPGDVA 162
Query: 189 LEEGNLIGPPELGLLASVGVTSITVYKKPIIHILSTGNEL 228
+ G +IG ++GLLA+VG + V+ +P + +++ G EL
Sbjct: 163 VRAGTIIGAAQVGLLAAVGRERVLVHPRPRLSVMAVGGEL 202
>sp|Q56207|MOEA_SYNE7 Molybdopterin molybdenumtransferase OS=Synechococcus elongatus
(strain PCC 7942) GN=moeA PE=3 SV=1
Length = 403
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 54/207 (26%)
Query: 31 QAGGYIVAETTVAKDDLPPFDASIKDGYAVIASDGAG-------KRKVVGERSAG--PVK 81
+ G ++A+ A DLP +D S DG+A+ + D A + VVG AG P
Sbjct: 30 ETGDRLLAKDLAAPCDLPHWDNSAMDGFALRSQDVAAASPDRPVRLPVVGRVMAGEQPPL 89
Query: 82 SASPLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVK 141
A+P + + TGAPIP G D +V+VED
Sbjct: 90 LANP--TGVACAVMTGAPIPAGFDVIVKVED----------------------------- 118
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPELG 201
VVQ EE I + GQ IR +G D+R+G+ +L +G + P L
Sbjct: 119 --VVQ------------EENAIAVSTPIPAGQFIRRQGEDLRQGSPLLAKGQRLTPMALM 164
Query: 202 LLASVGVTSITVYKKPIIHILSTGNEL 228
L A+VG+ + V+ K + ++STG E+
Sbjct: 165 LAAAVGMGELPVWSKLPVGLISTGTEV 191
>sp|Q44243|MOEA_NOSS1 Molybdopterin molybdenumtransferase OS=Nostoc sp. (strain PCC 7120
/ UTEX 2576) GN=moeA PE=3 SV=1
Length = 436
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 91/241 (37%), Gaps = 54/241 (22%)
Query: 1 MLEVEAAQKLILDFIETNKCGQQKQSLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAV 60
M V +I + + Q + + A G I+A + D P +D S DGYAV
Sbjct: 25 MPSVRDTANIIFNLVPKLDSQQDTEIVDLWAANGRILATPVNSTLDFPHWDNSAMDGYAV 84
Query: 61 IASDGAGKR-------KVVGERSAGPVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDT 113
D +VV E AG + L+ Q RI TGA +P G D+VV E T
Sbjct: 85 RYEDVHNSNAEQPVSLEVVAEIPAG-YQPKFTLQPGQAARIFTGAVMPSGGDTVVMQEKT 143
Query: 114 ELSKGKDGEEVEIKILKTPTKGQDIRVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQ 173
E + IL TP G+ +R+K + Q
Sbjct: 144 R------QENNRVFILTTPKPGEFVRLKAAYYQA-------------------------- 171
Query: 174 DIRVKGIDIRKGATILEEGNLIGPPELGLLASVGVTSITVYKKPIIHILSTGNE---LDE 230
G +L + E+ +LA+ + VY++P + I STG+E LD+
Sbjct: 172 -----------GTQLLPANTQLNAAEIAILAASQCPQVKVYRRPRVAIFSTGDELVTLDQ 220
Query: 231 P 231
P
Sbjct: 221 P 221
>sp|Q55368|MOEA_SYNY3 Molybdopterin molybdenumtransferase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=moeA PE=3 SV=1
Length = 390
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 49/211 (23%)
Query: 34 GYIVAETTVAKDDLPPFDASIKDGYAVIASD-GAGKR--KVVGERSAGPVKSASPLKSSQ 90
G ++AE+ A D PP D + DG A+ S+ G+R K++G +AG +S+ P ++
Sbjct: 30 GRVLAESIEADRDYPPGDRVMMDGVALAWSEYHQGRRHFKLLGTVAAGTPQSSLPDQTG- 88
Query: 91 CYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVKDSVVQVEDT 150
C + TGA +P D V+ E+ ++ ++KI+ +
Sbjct: 89 CLEVMTGALLPQNCDLVIPYEEVAIADN------QVKIINPRQR---------------- 126
Query: 151 ELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPELGLLASVGVTS 210
G+ + K D R G ILE + + P ++ S G T
Sbjct: 127 -------------------EPGEFVHPKASDCRAGKVILESSSKLNGPAWNIITSFGKTK 167
Query: 211 ITVYKKPIIHILSTGNELDE----PDAHVLK 237
+ V +KP I I+STG+EL E P H L+
Sbjct: 168 VRVKQKPRIQIISTGDELVEITQKPKIHQLR 198
>sp|Q58080|Y666_METJA Putative molybdopterin biosynthesis protein MJ0666
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0666
PE=3 SV=1
Length = 398
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 61/236 (25%)
Query: 1 MLEVEAAQKLILD----FIETNKCGQQKQSLSCRQAGGYIVAETTVAKDDLPPFDASIKD 56
++ +++A+K++ + +++ NK + + + +A I AE A DLP F+ + D
Sbjct: 7 LMPLKSAEKIVFEKLSEYLDENK---KVKEVDIVEALNRISAEDIKAPIDLPYFNKAAMD 63
Query: 57 GYAVIASDGAGKRKVVGERSAGPV----KSASPLKSSQCYRINTGAPIPPGADSVVQVED 112
GYAVIA D G P+ + + +I TG +P A++VV
Sbjct: 64 GYAVIAED------TFGASETNPIILNLADGDEITYGEAKKIFTGDKLPKNANAVV---- 113
Query: 113 TELSKGKDGEEVEIKILKTPTKGQDIRVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKG 172
+K+ +V+D +++ KT
Sbjct: 114 ---------------------------MKEFCNEVDDF------------VEVYKTVHPN 134
Query: 173 QDIRVKGIDIRKGATILEEGNLIGPPELGLLASVGVTSITVYKKPIIHILSTGNEL 228
+++ G D++KG +L++G +I P L +LAS+G+ I VY I+STG+EL
Sbjct: 135 ENVSRIGEDVKKGDVVLKKGEIINPYHLNMLASLGIKKIKVYDLS-FGIISTGDEL 189
>sp|O53725|MOEA2_MYCTU Molybdopterin molybdenumtransferase 2 OS=Mycobacterium tuberculosis
GN=moaE2 PE=3 SV=1
Length = 405
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 100/238 (42%), Gaps = 55/238 (23%)
Query: 1 MLEVEAAQKLILDFIETNKCGQQKQSLSCRQAGGYIVAETTVAKDDLPPFDASIKDGYAV 60
M V+ Q+++ + + C + ++ QA G ++ VA LP FD S DGYAV
Sbjct: 1 MRSVQEHQRVVAEMMR--AC--RPITVPLTQAQGLVLGGDVVAPLSLPVFDNSAMDGYAV 56
Query: 61 IASDGAGKRK-------VVGERSAGPVKSASPLKSSQCYRINTGAPIPPGADSVVQVEDT 113
A D +G V + AG + L+ +RI TGAP+P GA ++V VE T
Sbjct: 57 RAEDTSGATPQNPVMLPVAEDIPAGRADMLT-LQPVTAHRIMTGAPVPTGATAIVPVEAT 115
Query: 114 ELSKGKDGEEVEIKILKTPTKGQDIRVKDSVVQVEDTELTKGKDGEEVEIKILKTPTKGQ 173
DG + I + T G+
Sbjct: 116 -------------------------------------------DGGVDSVAIRQQATPGK 132
Query: 174 DIRVKGIDIRKGATILEEGNLIGPPELGLLASVGVTSITVYKKPIIHILSTGNELDEP 231
IR G D+ G T+L G ++ P LGL A++G+ + V + + ++STG+EL P
Sbjct: 133 HIRRSGEDVAAGTTVLHNGQIVTPAVLGLAAALGLAELPVLPRQRVLVISTGSELASP 190
>sp|Q09165|DIG1_CAEEL Mesocentin OS=Caenorhabditis elegans GN=dig-1 PE=1 SV=2
Length = 13100
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 49 PFDASIKDGYAVIASDGA-----GKRKVVGERSAGPVKSASPLKSSQCYRINTGAPIPPG 103
P DAS Y V +SDG ++ V+ ++S P+ P +S Y N G PI
Sbjct: 7459 PTDASGNYIYPVTSSDGQVLPTDAEKPVIVDQSGKPL----PTDASGNYIDNNGKPIVIE 7514
Query: 104 ADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVKD------SVVQVEDTELTKGKD 157
+ ED +LSK K GE V + K G+ + D +VV + EL+K D
Sbjct: 7515 GEEPTGPEDQKLSKNKKGEWVYPLVDKF---GKPVETDDNDKPVITVVDNDGNELSKNDD 7571
Query: 158 GEEVEIK 164
G +++
Sbjct: 7572 GNWIDLS 7578
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 49 PFDASIKDGYAVIASDGA-----GKRKVVGERSAGPVKSASPLKSSQCYRINTGAPIPPG 103
P DAS Y V +SDG ++ V+ ++S P+ P +S Y N G PI
Sbjct: 9996 PTDASGNYIYPVTSSDGQVLPTDAEKPVIVDQSGKPL----PTDASGNYIDNNGKPIVIE 10051
Query: 104 ADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVKD------SVVQVEDTELTKGKD 157
+ ED +LSK K GE V + K G+ + D +VV + EL+K D
Sbjct: 10052 GEEPTGPEDQKLSKNKKGEWVYPLVDKF---GKPVETDDNDKPVITVVDNDGNELSKNDD 10108
Query: 158 GEEVEIK 164
G +++
Sbjct: 10109 GNWIDLS 10115
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 49 PFDASIKDGYAVIASDGA-----GKRKVVGERSAGPVKSASPLKSSQCYRINTGAPIPPG 103
P DAS Y V +SDG ++ V+ ++S P+ P +S Y N G PI
Sbjct: 8233 PTDASGNYIYPVTSSDGQVLPTDAEKPVIVDQSGKPL----PTDASGNYIDNNGKPIVIE 8288
Query: 104 ADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVKD------SVVQVEDTELTKGKD 157
+ ED +LSK + GE V + K G+ + D +VV + EL+K D
Sbjct: 8289 GEEPTGPEDQKLSKNEKGEWVYPLVDKF---GKPVETDDNDKPVITVVDNDGNELSKNDD 8345
Query: 158 GEEVEIK 164
G +++
Sbjct: 8346 GNWIDLS 8352
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 49 PFDASIKDGYAVIASDGA-----GKRKVVGERSAGPVKSASPLKSSQCYRINTGAPIPPG 103
P DAS Y V +SDG ++ V+ ++S P+ P +S Y N G PI
Sbjct: 9277 PTDASGNYIYPVTSSDGQVLPTDAEKPVIVDQSGKPL----PTDASGNYIDNNGKPIVIE 9332
Query: 104 ADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVKD------SVVQVEDTELTKGKD 157
+ ED +LSK + GE V + K G+ + D +VV + EL+K D
Sbjct: 9333 GEEPTGPEDQKLSKNEKGEWVYPLVDKF---GKPVETDDNDKPVITVVDNDGNELSKNDD 9389
Query: 158 GEEVEIK 164
G +++
Sbjct: 9390 GNWIDLS 9396
>sp|Q39D20|SYD_BURS3 Aspartate--tRNA ligase OS=Burkholderia sp. (strain 383) GN=aspS
PE=3 SV=1
Length = 600
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D VQ+E TELT ++V+ K+ TP +D RV + + KG+ L G++ G E
Sbjct: 289 DLRVQLEFTELTDAM--KDVDFKVFSTPANAKDGRVAALRVPKGSE-LSRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V +K
Sbjct: 346 RIYGAKGLAWIKVNEK 361
>sp|A9AFC7|SYD_BURM1 Aspartate--tRNA ligase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=aspS PE=3 SV=1
Length = 600
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D V++E TELT ++V+ K+ TP +D RV + + KGA L G++ G E
Sbjct: 289 DLRVKLEFTELTDAM--KDVDFKVFSTPANAKDGRVAALRVPKGAE-LSRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V +K
Sbjct: 346 RIYGAKGLAWIKVNEK 361
>sp|B4EBD1|SYD_BURCJ Aspartate--tRNA ligase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=aspS PE=3 SV=1
Length = 600
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D VQ+E TELT ++V+ K+ TP +D RV + + KG L G++ G E
Sbjct: 289 DLRVQLEFTELTDAM--KDVDFKVFSTPANAKDGRVAALRVPKGGE-LSRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V +K
Sbjct: 346 RIYGAKGLAWIKVNEK 361
>sp|A0KAE8|SYD_BURCH Aspartate--tRNA ligase OS=Burkholderia cenocepacia (strain HI2424)
GN=aspS PE=3 SV=1
Length = 600
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D VQ+E TELT ++V+ K+ TP +D RV + + KG L G++ G E
Sbjct: 289 DLRVQLEFTELTDAM--KDVDFKVFSTPANAKDGRVAALRVPKGGE-LSRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V +K
Sbjct: 346 RIYGAKGLAWIKVNEK 361
>sp|Q1BTP1|SYD_BURCA Aspartate--tRNA ligase OS=Burkholderia cenocepacia (strain AU 1054)
GN=aspS PE=3 SV=1
Length = 600
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D VQ+E TELT ++V+ K+ TP +D RV + + KG L G++ G E
Sbjct: 289 DLRVQLEFTELTDAM--KDVDFKVFSTPANAKDGRVAALRVPKGGE-LSRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V +K
Sbjct: 346 RIYGAKGLAWIKVNEK 361
>sp|Q0BBZ1|SYD_BURCM Aspartate--tRNA ligase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=aspS PE=3 SV=1
Length = 600
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D VQ+E TELT ++V+ K+ TP +D RV + + KG L G++ G E
Sbjct: 289 DLRVQLEFTELTDAM--KDVDFKVFSTPANAKDGRVAALRVPKGGE-LSRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V +K
Sbjct: 346 RIYGAKGLAWIKVNEK 361
>sp|B1JYI9|SYD_BURCC Aspartate--tRNA ligase OS=Burkholderia cenocepacia (strain MC0-3)
GN=aspS PE=3 SV=1
Length = 600
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D VQ+E TELT ++V+ K+ TP +D RV + + KG L G++ G E
Sbjct: 289 DLRVQLEFTELTDAM--KDVDFKVFSTPANAKDGRVAALRVPKGGE-LSRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V +K
Sbjct: 346 RIYGAKGLAWIKVNEK 361
>sp|B1YWF2|SYD_BURA4 Aspartate--tRNA ligase OS=Burkholderia ambifaria (strain MC40-6)
GN=aspS PE=3 SV=1
Length = 600
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D VQ+E TELT ++V+ K+ TP +D RV + + KG L G++ G E
Sbjct: 289 DLRVQLEFTELTDAM--KDVDFKVFSTPANAKDGRVAALRVPKGGE-LSRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V +K
Sbjct: 346 RIYGAKGLAWIKVNEK 361
>sp|Q2KYC8|HGD_BORA1 Homogentisate 1,2-dioxygenase OS=Bordetella avium (strain 197N)
GN=hmgA PE=3 SV=1
Length = 432
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 157 DGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEE-GNLIGPPELGLLASVGVTSITVYK 215
D E +EI +L +G RV+ +D +LE G + PPELG + S G+ + ++
Sbjct: 168 DLEPLEIAVLP---RGVRFRVELLDAEARGYLLENFGTALRPPELGPIGSNGLANARDFQ 224
Query: 216 KPI---------IHILS--TGNELDEPDAHVLKPVVTF---HVPRKY 248
P+ +++ TG P H VV + H P KY
Sbjct: 225 TPVAWYEDVEGDFELIAKFTGGFWRAPLTHSPLDVVAWHGTHAPYKY 271
>sp|Q9NRG4|SMYD2_HUMAN N-lysine methyltransferase SMYD2 OS=Homo sapiens GN=SMYD2 PE=1 SV=2
Length = 433
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 119 KDGEEVEIKI--LKTPTKGQDIRVKDSVVQVEDTE--LTKGKDGEEVEIKILKTPTKGQD 174
K GEEV L PT+ ++ R++DS + + TK KD +VEI+ L P K +
Sbjct: 231 KPGEEVFTSYIDLLYPTEDRNDRLRDSYFFTCECQECTTKDKDKAKVEIRKLSDPPKAEA 290
Query: 175 IRVKGIDIRKGATILEE 191
IR +R ++EE
Sbjct: 291 IRDM---VRYARNVIEE 304
>sp|Q5U249|ELYS_XENLA Protein ELYS OS=Xenopus laevis GN=ahctf1 PE=1 SV=1
Length = 2408
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 101 PPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVKDSVVQVEDTELTKGKDGEE 160
P G D +QV+ + ++G+ G+ + LK P G+D++V+ S T+G+ G
Sbjct: 1806 PSGED--LQVQPSTPTRGRRGKVITSDDLKEPPSGEDLQVQPSTP-------TRGRRGRV 1856
Query: 161 VEIKILKTPTKGQDIRVK 178
+ L+ P G+D++V+
Sbjct: 1857 ITSDDLREPPPGEDLQVQ 1874
>sp|Q8C2A2|SEN54_MOUSE tRNA-splicing endonuclease subunit Sen54 OS=Mus musculus GN=Tsen54
PE=2 SV=2
Length = 525
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 8/160 (5%)
Query: 2 LEVEAAQKLILDFIETNKCGQQKQSLSCRQAGGYIVAETTVAKDDLPPFDASIK-DGYAV 60
L ++ A +L+L E Q Q S + GY+V ++ + P++ + DGYA
Sbjct: 135 LSIQEAYQLLL--TEDTLSFLQYQVFSHLKRLGYVVRRFQLSSV-VSPYERQLNLDGYAQ 191
Query: 61 IASDGAGKRKVVGERSAGPVKSASPLKSSQCYRINTGAPIPPGADSVVQV--EDTELSKG 118
DG+GKRK S V + + ++ A P D Q E ++ S
Sbjct: 192 CLEDGSGKRKRSS--SCRSVNKKPKVLQNSLPPVSLAASSSPACDQSSQYPEEKSQDSSP 249
Query: 119 KDGEEVEIKILKTPTKGQDIRVKDSVVQVEDTELTKGKDG 158
+ G E+ ++ L + D+ +D E ++ G G
Sbjct: 250 RQGSELPLQFLGSSEPCSDLAREDVGCDRESHKIENGAKG 289
>sp|Q6L1K9|DP2L_PICTO DNA polymerase II large subunit OS=Picrophilus torridus (strain
ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
GN=polC PE=3 SV=1
Length = 1080
Score = 32.0 bits (71), Expect = 3.8, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 122 EEVEIKILKTPTKGQDIRVKDSVVQVEDTELTKGKDGEEVEIKI-LKTPTKGQDIRVKGI 180
+EVEI I + + + S + E EL+K EE+ + I K + +D RV+ +
Sbjct: 36 DEVEIPIANDMAERVEELIHISGIAGEIRELSKSMSREELSLHISKKVASLLKDNRVEAL 95
Query: 181 D--IRKGATILEEGNLIGPPE 199
D +R G IL EG L+ P E
Sbjct: 96 DKAVRVGLAILTEGILVAPLE 116
>sp|Q99PP2|ZN318_MOUSE Zinc finger protein 318 (Fragment) OS=Mus musculus GN=Znf318 PE=1
SV=2
Length = 2064
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 93 RINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIRVKDSVVQVE---D 149
R + G P PPG DS + DT + +EI ++ K Q++ + + E
Sbjct: 1573 RFDLGEPGPPGTDSTSHLSDTHCQTNGPQKLIEINLIDNQNKNQEVYQSEGCRESEMKRK 1632
Query: 150 TELTKGK 156
TEL KGK
Sbjct: 1633 TEL-KGK 1638
>sp|A4JHR9|SYD_BURVG Aspartate--tRNA ligase OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=aspS PE=3 SV=1
Length = 600
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D V++E TELT ++V+ K+ TP +D RV + + KG L G++ G E
Sbjct: 289 DLRVKLEFTELTDAM--KDVDFKVFSTPANAKDGRVAALRVPKGGE-LSRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V +K
Sbjct: 346 RIYGAKGLAWIKVNEK 361
>sp|Q2T132|SYD_BURTA Aspartate--tRNA ligase OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=aspS PE=3 SV=1
Length = 600
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 142 DSVVQVEDTELTKGKDGEEVEIKILKTPTKGQDIRVKGIDIRKGATILEEGNLIGPPEL- 200
D V++E TELT ++V+ K+ TP +D RV + + KGA L G++ G E
Sbjct: 289 DLRVKLEFTELTDAM--KDVDFKVFSTPANTKDGRVAALRVPKGAE-LTRGDIDGYTEFV 345
Query: 201 GLLASVGVTSITVYKK 216
+ + G+ I V ++
Sbjct: 346 RIYGAKGLAWIKVNER 361
>sp|O67834|RNR_AQUAE Ribonuclease R OS=Aquifex aeolicus (strain VF5) GN=rnr PE=3 SV=1
Length = 705
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 33 GGYIVAETTVAKD-DLPPFD-ASIKDGYAVIA--SDGAGKRKV----VGERSAGPVKSAS 84
GG+ E KD +PPF+ + G V A ++ GK++V V +R+ + +
Sbjct: 77 GGFGFLEVEGGKDIYIPPFEMVKVFHGDVVKAKVTEFKGKKEVRIIKVLKRAKKDIVAKV 136
Query: 85 PLKSSQCYRINTGAPIPPGADSVVQVEDTELSKGKDGEEVEIKILKTPTKGQDIR 139
+ QCY + P+ A + + + K K+GE V +KI + PTK R
Sbjct: 137 VFEDEQCYVV----PLDENAHHRILLSKKDCQKLKEGEVVVLKITQFPTKKSPAR 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.134 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,395,581
Number of Sequences: 539616
Number of extensions: 4511389
Number of successful extensions: 10878
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 10736
Number of HSP's gapped (non-prelim): 158
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)