BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8246
(527 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LF5|A Chain A, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
pdb|3LF5|B Chain B, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
Length = 88
Score = 120 bits (301), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/81 (59%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Query: 44 IQGRIL-VSKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFN 102
++GR++ V++ +L +HNK+DD W+CIRG VYNV+ YM++HPGG +ELMR AG D TELF+
Sbjct: 1 MKGRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFD 60
Query: 103 KVHPWVNYESILQKCIVGKMG 123
+VH WVNYES+L++C+VG+M
Sbjct: 61 QVHRWVNYESMLKECLVGRMA 81
>pdb|2EIX|A Chain A, The Structure Of Physarum Polycephalum Cytochrome B5
Reductase
pdb|2EIX|B Chain B, The Structure Of Physarum Polycephalum Cytochrome B5
Reductase
Length = 243
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 275 KFNTMRLLHQEQVTHNVVLITLEYTSPM-FFYVPVGHHVFIKFIVNDVDISKPYTPVEPL 333
++ L ++ + HN L P +P+G H+ +K V+ +I +PYTPV
Sbjct: 10 EYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPV--- 66
Query: 334 QAAPLSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRN---KLV 390
+ +IK YE G +S + L G L+V P+G+FD K N ++
Sbjct: 67 --SSDDEKGYFDLIIKVYEKGQMSQYIDHLNPGDFLQVRGPKGQFDY----KPNMVKEMG 120
Query: 391 LLAAGTGLTPMIPVINWSIQSQRQS--VQLVFFNRTEQDIIWRDQLDTFA 438
++A GTG+TPM+ V I++ ++ + L+F N E DI+ R +LD A
Sbjct: 121 MIAGGTGITPMLQVARAIIKNPKEKTIINLIFANVNEDDILLRTELDDMA 170
>pdb|2OZ0|A Chain A, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
pdb|2OZ0|B Chain B, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
Length = 511
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 50 VSKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVH-PWV 108
+S A++A+HNK DD W+ I G VY++TR++ HPGG++ + AG D T +F +H P V
Sbjct: 11 ISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNV 70
Query: 109 NYESILQKCIVGKMGSSLPDE 129
+ I + +G + S+P E
Sbjct: 71 IDKYIAPEKKLGPLQGSMPPE 91
>pdb|1LDC|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LDC|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
Length = 511
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 50 VSKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVH-PWV 108
+S A++A+HNK DD W+ I G VY++TR++ HPGG++ + AG D T +F +H P V
Sbjct: 11 ISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNV 70
Query: 109 NYESILQKCIVGKMGSSLPDE 129
+ I + +G + S+P E
Sbjct: 71 IDKYIAPEKKLGPLQGSMPPE 91
>pdb|1FCB|A Chain A, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
Resolution
pdb|1FCB|B Chain B, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
Resolution
pdb|1KBI|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
pdb|1KBI|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
Length = 511
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 50 VSKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVH-PWV 108
+S A++A+HNK DD W+ I G VY++TR++ HPGG++ + AG D T +F +H P V
Sbjct: 11 ISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNV 70
Query: 109 NYESILQKCIVGKMGSSLPDE 129
+ I + +G + S+P E
Sbjct: 71 IDKYIAPEKKLGPLQGSMPPE 91
>pdb|1SZE|A Chain A, L230a Mutant Flavocytochrome B2 With Benzoylformate
pdb|1SZE|B Chain B, L230a Mutant Flavocytochrome B2 With Benzoylformate
Length = 511
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 50 VSKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVH-PWV 108
+S A++A+HNK DD W+ I G VY++TR++ HPGG++ + AG D T +F +H P V
Sbjct: 11 ISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNV 70
Query: 109 NYESILQKCIVGKMGSSLPDE 129
+ I + +G + S+P E
Sbjct: 71 IDKYIAPEKKLGPLQGSMPPE 91
>pdb|1SZF|A Chain A, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
pdb|1SZF|B Chain B, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
pdb|1SZG|A Chain A, A198g:l230a Flavocytochrome B2 With Sulfite Bound
pdb|1SZG|B Chain B, A198g:l230a Flavocytochrome B2 With Sulfite Bound
Length = 511
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 50 VSKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVH-PWV 108
+S A++A+HNK DD W+ I G VY++TR++ HPGG++ + AG D T +F +H P V
Sbjct: 11 ISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNV 70
Query: 109 NYESILQKCIVGKMGSSLPDE 129
+ I + +G + S+P E
Sbjct: 71 IDKYIAPEKKLGPLQGSMPPE 91
>pdb|1LTD|A Chain A, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
pdb|1LTD|B Chain B, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
Length = 506
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 50 VSKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVH-PWV 108
+S A++A+HNK DD W+ I G VY++TR++ HPGG++ + AG D T +F +H P V
Sbjct: 6 ISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNV 65
Query: 109 NYESILQKCIVGKMGSSLPDE 129
+ I + +G + S+P E
Sbjct: 66 IDKYIAPEKKLGPLQGSMPPE 86
>pdb|3KS0|A Chain A, Crystal Structure Of The Heme Domain Of Flavocytochrome B2
In Complex With Fab B2b4
pdb|3KS0|B Chain B, Crystal Structure Of The Heme Domain Of Flavocytochrome B2
In Complex With Fab B2b4
Length = 95
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 50 VSKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVH-PWV 108
+S A++A+HNK DD W+ I G VY++TR++ HPGG++ + AG D T +F +H P V
Sbjct: 6 ISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNV 65
Query: 109 NYESILQKCIVGKMGSSLPDE 129
+ I + +G + S+P E
Sbjct: 66 IDKYIAPEKKLGPLQGSMPPE 86
>pdb|1CNF|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
pdb|2CND|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
Length = 270
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 280 RLLHQEQVTHNVVLITLEYTSP-MFFYVPVGHHVFIKFIVNDVDISKPYTPVEPLQAAPL 338
RL+ +++++ +V L SP +P+G H+F+ + + YTP +
Sbjct: 16 RLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVDEI-- 73
Query: 339 SYSNTLTFLIKSY---------EDGLLSPLLCGLREGQELEVSSPEGKFDVGLIG----- 384
L+K Y GL++ L L G ++V P G + G
Sbjct: 74 ---GHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVIN 130
Query: 385 --KRN--KLVLLAAGTGLTPMIPVINWSIQSQRQS---VQLVFFNRTEQDIIWRDQLDTF 437
+RN +L ++ G+G+TPM +I ++ Q + + LV+ NRTE DI+ RD+LD +
Sbjct: 131 GKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDILLRDELDRW 190
Query: 438 A 438
A
Sbjct: 191 A 191
>pdb|1CNE|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
Length = 270
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 280 RLLHQEQVTHNVVLITLEYTSP-MFFYVPVGHHVFIKFIVNDVDISKPYTPVEPLQAAPL 338
RL+ +++++ +V L SP +P+G H+F+ + + YTP +
Sbjct: 16 RLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVDEI-- 73
Query: 339 SYSNTLTFLIKSY---------EDGLLSPLLCGLREGQELEVSSPEGKFDVGLIG----- 384
L+K Y GL++ L L G ++V P G + G
Sbjct: 74 ---GHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVIN 130
Query: 385 --KRN--KLVLLAAGTGLTPMIPVINWSIQSQRQS---VQLVFFNRTEQDIIWRDQLDTF 437
+RN +L ++ G+G+TPM +I ++ Q + + LV+ NRTE DI+ RD+LD +
Sbjct: 131 GKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDILLRDELDRW 190
Query: 438 A 438
A
Sbjct: 191 A 191
>pdb|1B5M|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 84
Score = 58.9 bits (141), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++A+ N ++ WM I G VY++TR++ HPGG E L+ AG DATE F V + +
Sbjct: 9 EVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREM 68
Query: 114 LQKCIVG 120
L++ +G
Sbjct: 69 LKQYYIG 75
>pdb|3MUS|A Chain A, 2a Resolution Structure Of Rat Type B Cytochrome B5
pdb|3MUS|B Chain B, 2a Resolution Structure Of Rat Type B Cytochrome B5
Length = 87
Score = 58.9 bits (141), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++A+ N ++ WM I G VY++TR++ HPGG E L+ AG DATE F V + +
Sbjct: 11 EVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREM 70
Query: 114 LQKCIVG 120
L++ +G
Sbjct: 71 LKQYYIG 77
>pdb|3NER|A Chain A, Structure Of Human Type B Cytochrome B5
pdb|3NER|B Chain B, Structure Of Human Type B Cytochrome B5
Length = 92
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++A+ N ++W+ I G VY+VTR+++ HPGG E L+ AG+DA+E F V + +
Sbjct: 16 EVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREM 75
Query: 114 LQKCIVGKMGSS 125
L++ +G + S
Sbjct: 76 LKQYYIGDIHPS 87
>pdb|1EUE|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1EUE|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 86
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++A+ N ++ WM I G VY++TR++ HPGG E L+ AG DATE F + + +
Sbjct: 11 EVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEILLEQAGADATESFEDIGHSPDAREM 70
Query: 114 LQKCIVG 120
L++ +G
Sbjct: 71 LKQYYIG 77
>pdb|3OZZ|B Chain B, Structure Of A Cytochrome B5 Core-Swap Mutant
Length = 82
Score = 57.8 bits (138), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN WM I VY++TR++ HPGG E L+ AG DATE F V + +
Sbjct: 9 EIQKHNNAKSTWMIIHYKVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREM 68
Query: 114 LQKCIVGKM 122
L+ I+G++
Sbjct: 69 LKTFIIGEL 77
>pdb|1AWP|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1AWP|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 92
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++A+ N ++ WM I G VY++TR++ HPGG E L+ AG DATE F + + +
Sbjct: 16 EVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEELLLEQAGADATESFEDLGHSPDAREM 75
Query: 114 LQKCIVG 120
L++ +G
Sbjct: 76 LKQYYIG 82
>pdb|2I89|A Chain A, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|B Chain B, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|C Chain C, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|D Chain D, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
Length = 93
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKV 104
++A+HN + WM + G VY++TR++ HPGG E L AG DATE F V
Sbjct: 17 EVAKHNTSESTWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDV 67
>pdb|1UMK|A Chain A, The Structure Of Human Erythrocyte Nadh-Cytochrome B5
Reductase
Length = 275
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 32/184 (17%)
Query: 279 MRLLHQEQVTHNVVLITLEYTSPMFFY-VPVGHHVFIKFIVNDVDISKPYTPVEPLQAAP 337
+RL+ +E ++H+ SP +PVG H+++ ++ + +PYTP+ +
Sbjct: 19 LRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPI-----SS 73
Query: 338 LSYSNTLTFLIKSY---------EDGLLSPLLCGLREGQELEVSSP--------EGKFDV 380
+ +IK Y G +S L ++ G +E P +GKF +
Sbjct: 74 DDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAI 133
Query: 381 GLIGKRNKLV-------LLAAGTGLTPMIPVINWSIQ--SQRQSVQLVFFNRTEQDIIWR 431
K N ++ ++A GTG+TPM+ VI ++ L+F N+TE+DI+ R
Sbjct: 134 RPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLR 193
Query: 432 DQLD 435
+L+
Sbjct: 194 PELE 197
>pdb|1ICC|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|C Chain C, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|D Chain D, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 87
Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++A+ N ++ WM I G VY++TR++ HPGG E L AG DATE F V + +
Sbjct: 11 EVAKRNTSEETWMVIHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDAREM 70
Query: 114 LQKCIVG 120
L++ +G
Sbjct: 71 LKQYYIG 77
>pdb|1NDH|A Chain A, Crystal Structure Of Nadh-Cytochrome B5 Reductase From Pig
Liver At 2.4 Angstroms Resolution
Length = 272
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 32/184 (17%)
Query: 279 MRLLHQEQVTHNVVLITLEYTSP-MFFYVPVGHHVFIKFIVNDVDISKPYTPVEPLQAAP 337
+RL+ +E V H+ SP +PVG H+++ ++ + +PYTPV +
Sbjct: 16 LRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIYLSARIDGNLVIRPYTPV-----SS 70
Query: 338 LSYSNTLTFLIKSY---------EDGLLSPLLCGLREGQELEVSSP--------EGKFDV 380
+ +IK Y G +S L ++ G +E P +GKF +
Sbjct: 71 DDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAI 130
Query: 381 GLIGKRNKLV-------LLAAGTGLTPMIPVINWSIQ--SQRQSVQLVFFNRTEQDIIWR 431
K + ++ ++A GTG+TPM+ VI ++ L+F N+TE+DI+ R
Sbjct: 131 RPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLR 190
Query: 432 DQLD 435
+L+
Sbjct: 191 PELE 194
>pdb|2IBJ|A Chain A, Structure Of House Fly Cytochrome B5
Length = 88
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 51 SKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNY 110
++A++A++N +D W I VY+VT +++ HPGG E L+ AG DATE F V +
Sbjct: 10 TRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDA 69
Query: 111 ESILQKCIVGKM 122
++++ VG++
Sbjct: 70 REMMKQYKVGEL 81
>pdb|1LJ0|A Chain A, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|B Chain B, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|C Chain C, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|D Chain D, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5
Length = 92
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKV 104
++A+ N ++ WM + G VY++TR++ HPGG E L AG DATE F V
Sbjct: 16 EVAKRNTSEETWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDV 66
>pdb|1IB0|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad And Nad
pdb|1I7P|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad
Length = 274
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 32/184 (17%)
Query: 279 MRLLHQEQVTHNVVLITLEYTSPMFFY-VPVGHHVFIKFIVNDVDISKPYTPVEPLQAAP 337
+RL+ +E ++H+ SP +P+G H+++ ++ + +PYTPV +
Sbjct: 18 LRLIDKEILSHDTRRFRFALPSPQHILGLPIGQHIYLSTRIDGNLVIRPYTPV-----SS 72
Query: 338 LSYSNTLTFLIKSY---------EDGLLSPLLCGLREGQELEVSSP--------EGKFDV 380
+ ++K Y G +S L + G +E P +GKF +
Sbjct: 73 DDDKGFVDLVVKVYFKETHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVYQGKGKFAI 132
Query: 381 GLIGKRNKLV-------LLAAGTGLTPMIPVINWSIQ--SQRQSVQLVFFNRTEQDIIWR 431
K N +V ++A GTG+TPM+ VI ++ + L+F N++E+DI+ R
Sbjct: 133 RADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDILLR 192
Query: 432 DQLD 435
+L+
Sbjct: 193 PELE 196
>pdb|1LQX|A Chain A, Crystal Structure Of V45e Mutant Of Cytochrome B5
Length = 82
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG EEL AG DATE F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEELREQAGGDATENFEDVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1QX4|A Chain A, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
pdb|1QX4|B Chain B, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
Length = 274
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 32/184 (17%)
Query: 279 MRLLHQEQVTHNVVLITLEYTSPMFFY-VPVGHHVFIKFIVNDVDISKPYTPVEPLQAAP 337
+RL+ +E ++H+ SP +P+G H+++ ++ + +PYTPV +
Sbjct: 18 LRLIDKEILSHDTRRFRFALPSPQHILGLPIGQHIYLSTRIDGNLVIRPYTPV-----SS 72
Query: 338 LSYSNTLTFLIKSY---------EDGLLSPLLCGLREGQELEVSSP--------EGKFDV 380
+ ++K Y G + L + G +E P +GKF +
Sbjct: 73 DDDKGFVDLVVKVYFKETHPKFPAGGKMPQYLENMNIGDTIEFRGPNGLLVYQGKGKFAI 132
Query: 381 GLIGKRNKLV-------LLAAGTGLTPMIPVINWSIQ--SQRQSVQLVFFNRTEQDIIWR 431
K N +V ++A GTG+TPM+ VI ++ + L+F N++E+DI+ R
Sbjct: 133 RADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDILLR 192
Query: 432 DQLD 435
+L+
Sbjct: 193 PELE 196
>pdb|2I96|A Chain A, Solution Structure Of The Oxidized Microsomal Human
Cytochrome B5
Length = 108
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 16 EIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREM 75
Query: 114 LQKCIVGKMGSSLPDENP 131
+ I+G++ PD+ P
Sbjct: 76 SKTFIIGELH---PDDRP 90
>pdb|1M20|A Chain A, Crystal Structure Of F35y Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T+Y++ HPGG E L AG DATE F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKYLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1SH4|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V45h
Length = 82
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEHLREQAGGDATENFEDVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1LR6|A Chain A, Crystal Structure Of V45y Mutant Of Cytochrome B5
Length = 82
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEYLREQAGGDATENFEDVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|2M33|A Chain A, Solution Nmr Structure Of Full-length Oxidized Microsomal
Rabbit Cytochrome B5
Length = 104
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 16 EIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 75
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 76 SKTFIIGEL 84
>pdb|1EHB|A Chain A, Crystal Structure Of Recombinant Trypsin-Solubilized
Fragment Of Cytochrome B5
pdb|1NX7|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5
Length = 82
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1DO9|A Chain A, Solution Structure Of Oxidized Microsomal Rabbit
Cytochrome B5. Factors Determining The Heterogeneous
Binding Of The Heme
Length = 94
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 11 EIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 70
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 71 SKTFIIGEL 79
>pdb|1X3X|A Chain A, Crystal Structure Of Cytochrome B5 From Ascaris Suum
pdb|1X3X|B Chain B, Crystal Structure Of Cytochrome B5 From Ascaris Suum
Length = 82
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 51 SKAQLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNY 110
+K ++A+HN ++D+W+ G V+++T + HPGG+ ++ AG DAT + + P V
Sbjct: 7 TKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGGK-VILNKAGQDATSVLKTLAPHVKA 65
Query: 111 ESILQK 116
++ K
Sbjct: 66 ADVVMK 71
>pdb|1CYO|A Chain A, Bovine Cytochrome B(5)
Length = 93
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 11 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 70
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 71 SKTFIIGEL 79
>pdb|1HKO|A Chain A, Nmr Structure Of Bovine Cytochrome B5
Length = 104
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 15 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 74
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 75 SKTFIIGEL 83
>pdb|1IB7|A Chain A, Solution Structure Of F35y Mutant Of Rat Ferro Cytochrome
B5, A Conformation, Ensemble Of 20 Structures
Length = 94
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +H W+ + VY++T+Y++ HPGG E L AG DATE F V + +
Sbjct: 11 EIQKHKDSKSTWVILHHKVYDLTKYLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 70
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 71 SKTYIIGEL 79
>pdb|1U9U|A Chain A, Crystal Structure Of F58y Mutant Of Cytochrome B5
Length = 82
Score = 48.9 bits (115), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE + V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENYEDVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1U9M|A Chain A, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|B Chain B, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|C Chain C, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|D Chain D, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|E Chain E, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|F Chain F, Crystal Structure Of F58w Mutant Of Cytochrome B5
Length = 82
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE + V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENWEDVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1JEX|A Chain A, Solution Structure Of A67v Mutant Of Rat Ferro Cytochrome
B5
Length = 94
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +H W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 11 EIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDVREL 70
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 71 SKTYIIGEL 79
>pdb|1I87|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1I8C|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1IET|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, Minimized Average
Structure
pdb|1IEU|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, 10 Structures
Length = 98
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +H W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 15 EIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 74
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 75 SKTYIIGEL 83
>pdb|1AQA|A Chain A, Solution Structure Of Reduced Microsomal Rat Cytochrome
B5, Nmr, Minimized Average Structure
pdb|1MNY|A Chain A, Dimethyl Propionate Ester Heme-Containing Cytochrome B5
pdb|2AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 21 Structures
Length = 94
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +H W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 11 EIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 70
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 71 SKTYIIGEL 79
>pdb|1BLV|A Chain A, Solution Structure Of Oxidized Rat Microsomal Cytochrome
B5 In The Presence Of 2 M Guanidinium Chloride:
Monitoring The Early Steps In Protein Unfolding
pdb|1AW3|A Chain A, The Solution Nmr Structure Of Oxidized Rat Microsomal
Cytochrome B5, Minimized Average Structure
pdb|1AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 19 Structures
pdb|1B5A|A Chain A, Rat Ferrocytochrome B5 A Conformation, Nmr, 1 Structure
pdb|1B5B|A Chain A, Rat Ferrocytochrome B5 B Conformation, Nmr, 1 Structure
Length = 94
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +H W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 11 EIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 70
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 71 SKTYIIGEL 79
>pdb|1BFX|A Chain A, The Solution Nmr Structure Of The B Form Of Oxidized Rat
Microsomal Cytochrome B5, Minimized Average Structure
Length = 99
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +H W+ + VY++T++++ HPGG E L AG DATE F V + +
Sbjct: 16 EIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREL 75
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 76 SKTYIIGEL 84
>pdb|1I5U|A Chain A, Solution Structure Of Cytochrome B5 Triple Mutant
(E48aE56AD60A)
Length = 82
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DAT F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLRAQAGGDATANFEAVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1ES1|A Chain A, Crystal Structure Of Val61his Mutant Of
Trypsin-Solubilized Fragment Of Cytochrome B5
Length = 82
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDHGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1J0Q|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V61h
Length = 82
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG E L AG DATE F + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDHGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1M59|A Chain A, Crystal Structure Of P40v Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ H GG E L AG DATE F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHVGGEEVLREQAGGDATENFEDVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1CXY|A Chain A, Structure And Characterization Of Ectothiorhodospira
Vacuolata Cytochrome B558, A Prokaryotic Homologue Of
Cytochrome B5
Length = 90
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATE 99
Q+AEH+ DD WM I G VY++T Y+ HPG ++ G ++TE
Sbjct: 14 QVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTE 59
>pdb|1M2I|A Chain A, Crystal Structure Of E44aE56A MUTANT OF CYTOCHROME B5
Length = 82
Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG L AG DAT F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLREQAGGDATANFEDVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1F03|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
pdb|1F04|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
Length = 82
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG L AG DAT F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|1M2M|A Chain A, Crystal Structure Of E44aE48AE56AD60A MUTANT OF Cytochrome
B5
Length = 82
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 54 QLAEHNKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELFNKVHPWVNYESI 113
++ +HN W+ + VY++T++++ HPGG L AG DAT F V + +
Sbjct: 9 EIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHSTDAREL 68
Query: 114 LQKCIVGKM 122
+ I+G++
Sbjct: 69 SKTFIIGEL 77
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 341 SNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTP 400
S T++ +K DG+ S LC L+ G E++++ P GK + +++L GTG+ P
Sbjct: 117 SKTVSLCVKRVPDGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAP 176
Query: 401 M 401
Sbjct: 177 F 177
>pdb|3OZU|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Miconazole
pdb|3OZV|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZV|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZW|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
pdb|3OZW|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
Length = 403
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 366 GQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPMIPVINWSIQSQRQSVQLVFFNRTE 425
G ++++++P G F + + + +VL++ G GLTPM+ ++ ++Q+ + V V R
Sbjct: 247 GDQVKLAAPYGSFHID-VDAKTPIVLISGGVGLTPMVSMLKVALQAPPRQVVFVHGARNS 305
Query: 426 QDIIWRDQLDTFA 438
RD+L A
Sbjct: 306 AVHAMRDRLREAA 318
>pdb|1CQX|A Chain A, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
pdb|1CQX|B Chain B, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
Length = 403
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 366 GQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPMIPVINWSIQSQRQSVQLVFFNRTE 425
G ++++++P G F + + + +VL++ G GLTPM+ ++ ++Q+ + V V R
Sbjct: 247 GDQVKLAAPYGSFHID-VDAKTPIVLISGGVGLTPMVSMLKVALQAPPRQVVFVHGARNS 305
Query: 426 QDIIWRDQLDTFA 438
RD+L A
Sbjct: 306 AVHAMRDRLREAA 318
>pdb|1MJ4|A Chain A, Crystal Structure Analysis Of The Cytochrome B5 Domain
Of Human Sulfite Oxidase
Length = 82
Score = 38.5 bits (88), Expect = 0.009, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 49 LVSKAQLAEHNK-EDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAG 94
+ +K +++ H E +W+ + V++VT ++D HPGG +LM AG
Sbjct: 6 IYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAG 52
>pdb|2QDX|A Chain A, P.Aeruginosa Fpr With Fad
pdb|3CRZ|A Chain A, Ferredoxin-Nadp Reductase
Length = 257
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 308 VGHHVFIKFIVNDVDISKPYTPVEPLQAAPLSYSNTLTFLIKSYEDGLLSPLLCGLREGQ 367
G V I V+ + + Y+ P +Y L F DG L+ L L+EG
Sbjct: 33 TGQFVMIGLEVDGRPLMRAYSIASP------NYEEHLEFFSIKVPDGPLTSRLQHLKEGD 86
Query: 368 ELEVS-SPEGKF--DVGLIGKRNKLVLLAAGTGLTPMIPVIN 406
EL VS P G D L GK L LL+ GTG+ P + VI
Sbjct: 87 ELMVSRKPTGTLVHDDLLPGKH--LYLLSTGTGMAPFLSVIQ 126
>pdb|1A8P|A Chain A, Ferredoxin Reductase From Azotobacter Vinelandii
Length = 258
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 309 GHHVFIKFIVNDVDISKPYTPVEPLQAAPLSYSNTLTFLIKSYEDGLLSPLLCGLREGQE 368
G V I V+ + + Y+ P +Y L F ++G L+ L L+EG E
Sbjct: 35 GQFVMIGLEVDGRPLMRAYSIASP------NYEEHLEFFSIKVQNGPLTSRLQHLKEGDE 88
Query: 369 LEVS-SPEGKFDVGLIGKRNKLVLLAAGTGLTPMIPVI 405
L VS P G + L +L+ GTGL P + +I
Sbjct: 89 LMVSRKPTGTLVTSDLLPGKHLYMLSTGTGLAPFMSLI 126
>pdb|3HBG|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant C185s
pdb|3HBP|A Chain A, The Crystal Structure Of C185s Mutant Of Recombinant
Sulfite Oxidase With Bound Substrate, Sulfite, At The
Active Site
Length = 466
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 51 SKAQLAEH-NKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELF---NKVHP 106
++ ++ H + E+ +W+ V++VT +++ HPGG ++++ AG A E F VH
Sbjct: 8 TREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVHG 66
Query: 107 WVNYESILQKCIVGKMGSSLPDENP 131
+ +LQ+ VG++ PDE P
Sbjct: 67 EPHVLELLQQYKVGELS---PDEAP 88
>pdb|3HC2|A Chain A, Crystal Structure Of Chicken Sulfite Oxidase Mutant Tyr
322 Phe
Length = 466
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 51 SKAQLAEH-NKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELF---NKVHP 106
++ ++ H + E+ +W+ V++VT +++ HPGG ++++ AG A E F VH
Sbjct: 8 TREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVHG 66
Query: 107 WVNYESILQKCIVGKMGSSLPDENP 131
+ +LQ+ VG++ PDE P
Sbjct: 67 EPHVLELLQQYKVGELS---PDEAP 88
>pdb|3HBQ|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant Cys 185 Ala
Length = 466
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 51 SKAQLAEH-NKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELF---NKVHP 106
++ ++ H + E+ +W+ V++VT +++ HPGG ++++ AG A E F VH
Sbjct: 8 TREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVHG 66
Query: 107 WVNYESILQKCIVGKMGSSLPDENP 131
+ +LQ+ VG++ PDE P
Sbjct: 67 EPHVLELLQQYKVGELS---PDEAP 88
>pdb|1FDR|A Chain A, Flavodoxin Reductase From E. Coli
Length = 248
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 339 SYSNT-----LTFLIKSYEDGLLSPLLCGLREGQELE-VSSPEGKFDVGLIGKRNKLVLL 392
SY N+ L F + + DG LSP L L+ G E++ VS G F + + L +L
Sbjct: 53 SYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPHCETLWML 112
Query: 393 AAGTGLTPMIPVINWSIQSQR-QSVQLVFFNRTEQDIIW 430
A GT + P + ++ R +++ LV R D+ +
Sbjct: 113 ATGTAIGPYLSILRLGKDLDRFKNLVLVHAARYAADLSY 151
>pdb|3R18|A Chain A, Chicken Sulfite Oxidase Double Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 51 SKAQLAEH-NKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELF---NKVHP 106
++ ++ H + E+ +W+ V++VT +++ HPGG ++++ AG A E F VH
Sbjct: 8 TREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVHG 66
Query: 107 WVNYESILQKCIVGKMGSSLPDENP 131
+ +LQ+ VG++ PDE P
Sbjct: 67 EPHVLELLQQYKVGELS---PDEAP 88
>pdb|1SOX|A Chain A, Sulfite Oxidase From Chicken Liver
pdb|1SOX|B Chain B, Sulfite Oxidase From Chicken Liver
Length = 466
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 51 SKAQLAEH-NKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELF---NKVHP 106
++ ++ H + E+ +W+ V++VT +++ HPGG ++++ AG A E F VH
Sbjct: 8 TREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVHG 66
Query: 107 WVNYESILQKCIVGKMGSSLPDENP 131
+ +LQ+ VG++ PDE P
Sbjct: 67 EPHVLELLQQYKVGELS---PDEAP 88
>pdb|3R19|A Chain A, Chicken Sulfite Oxidase Triple Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 51 SKAQLAEH-NKEDDMWMCIRGVVYNVTRYMDFHPGGREELMRGAGMDATELF---NKVHP 106
++ ++ H + E+ +W+ V++VT +++ HPGG ++++ AG A E F VH
Sbjct: 8 TREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVHG 66
Query: 107 WVNYESILQKCIVGKMGSSLPDENP 131
+ +LQ+ VG++ PDE P
Sbjct: 67 EPHVLELLQQYKVGELS---PDEAP 88
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N ++K G+ S LC L+ G E++++ P GK + +++LA GTG
Sbjct: 118 LVYTNDQGEVVK----GVCSNFLCDLKPGAEVKITGPVGKEMLMPKDPNATIIMLATGTG 173
Query: 398 LTP 400
+ P
Sbjct: 174 IAP 176
>pdb|3FPK|A Chain A, Crystal Structure Of Ferredoxin-Nadp Reductase From
Salmonella Typhimurium
pdb|3FPK|B Chain B, Crystal Structure Of Ferredoxin-Nadp Reductase From
Salmonella Typhimurium
Length = 251
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 344 LTFLIKSYEDGLLSPLLCGLREGQELE-VSSPEGKFDVGLIGKRNKLVLLAAGTGLTPMI 402
L F + + G LSP L L+ G E++ VS G F + + L +LA GT + P +
Sbjct: 66 LEFYLVTVPQGKLSPRLAALKPGDEVQVVSDASGFFVLDEVPDCETLWMLATGTAIGPYL 125
Query: 403 PVINWSIQSQR-QSVQLVFFNRTEQDIIW 430
++ + R +++ LV R D+ +
Sbjct: 126 SILQYGQDVARFKNLVLVHAARFAADLSY 154
>pdb|2PIA|A Chain A, Phthalate Dioxygenase Reductase: A Modular Structure For
Electron Transfer From Pyridine Nucleotides To [2fe-2s]
Length = 321
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 365 EGQELEVSSPEGKFDVGLIGKRNK-LVLLAAGTGLTPMIPVINWSIQSQRQSVQLVFFNR 423
EG +EVS P +F + KR K +L+A G G+TPM+ + +S +L + R
Sbjct: 92 EGDAVEVSLPRNEFP---LDKRAKSFILVAGGIGITPMLSMARQLRAEGLRSFRLYYLTR 148
Query: 424 TEQDIIWRDQL 434
+ + D+L
Sbjct: 149 DPEGTAFFDEL 159
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N ++K G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 112 LVYTNDAGEVVK----GVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTG 167
Query: 398 LTPM 401
+ P
Sbjct: 168 IAPF 171
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N ++K G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 112 LVYTNDAGEVVK----GVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTG 167
Query: 398 LTPM 401
+ P
Sbjct: 168 IAPF 171
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N ++K G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 112 LVYTNDAGEVVK----GVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTG 167
Query: 398 LTPM 401
+ P
Sbjct: 168 IAPF 171
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N ++K G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 112 LVYTNDAGEVVK----GVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTG 167
Query: 398 LTPM 401
+ P
Sbjct: 168 IAPF 171
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N ++K G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 112 LVYTNDAGEVVK----GVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTG 167
Query: 398 LTPM 401
+ P
Sbjct: 168 IAPF 171
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N ++K G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 99 LVYTNDAGEVVK----GVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTG 154
Query: 398 LTPM 401
+ P
Sbjct: 155 IAPF 158
>pdb|4G1B|A Chain A, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1B|B Chain B, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1B|C Chain C, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1B|D Chain D, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1V|A Chain A, X-Ray Structure Of Yeast Flavohemoglobin
Length = 399
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 339 SYSNTLTFLIK------SYEDGLLSPLLC-GLREGQELEVSSPEGKFDVG--LIGKRN-K 388
S N L F +K ++ GL+S L + G E+++S+P G F + LI +
Sbjct: 215 STKNGLRFAVKMEAARENFPAGLVSEYLHKDAKVGDEIKLSAPAGDFAINKELIHQNEVP 274
Query: 389 LVLLAAGTGLTPMIPVINWSIQ 410
LVLL++G G+TP++ ++ ++
Sbjct: 275 LVLLSSGVGVTPLLAMLEEQVK 296
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N ++K G+ S LC L+ G +++++ P GK + +++LA GTG
Sbjct: 114 LVYTNDQGEIVK----GVCSNFLCDLKPGADVKITGPVGKEMLMPKDPNATVIMLATGTG 169
Query: 398 LTP 400
+ P
Sbjct: 170 IAP 172
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N ++K G+ S LC L+ G ++++ P GK + +++LA GTG
Sbjct: 118 LIYTNDAGEIVK----GVCSNFLCDLQPGDNVQITGPVGKEMLMPKDPNATIIMLATGTG 173
Query: 398 LTPM 401
+ P
Sbjct: 174 IAPF 177
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N IK G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 118 LIYTNDAGETIK----GVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTG 173
Query: 398 LTPM 401
+ P
Sbjct: 174 IAPF 177
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N IK G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 118 LIYTNDAGETIK----GVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTG 173
Query: 398 LTPM 401
+ P
Sbjct: 174 IAPF 177
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N IK G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 118 LIYTNDAGETIK----GVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTG 173
Query: 398 LTPM 401
+ P
Sbjct: 174 IAPF 177
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N IK G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 118 LIYTNDAGETIK----GVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTG 173
Query: 398 LTPM 401
+ P
Sbjct: 174 IAPF 177
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 338 LSYSNTLTFLIKSYEDGLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTG 397
L Y+N IK G+ S LC L+ G E++++ P GK + +++L GTG
Sbjct: 118 LIYTNDAGETIK----GVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTG 173
Query: 398 LTPM 401
+ P
Sbjct: 174 IAPF 177
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+TPM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPM 163
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+TPM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPM 163
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+TPM
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPM 162
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+TPM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPM 163
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC6|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
Length = 314
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 354 GLLSPLLCGLREGQELEVSSPEG-KFDVGLIGKRNKLVLLAAGTGLTPMI 402
G+ S +C L+ G E+ ++ P G KF + ++ LA GTG+ P I
Sbjct: 132 GVCSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFI 181
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S LC L+ G +++++ P GK + +++L GTG+ P
Sbjct: 112 GVCSNFLCDLKPGADVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPF 159
>pdb|2XNJ|A Chain A, Crystal Structure Of An Engineered Ferredoxin(Flavodoxin)
Nadp(H) Reductase (Fpr) From Escherichia Coli
pdb|2XNJ|B Chain B, Crystal Structure Of An Engineered Ferredoxin(Flavodoxin)
Nadp(H) Reductase (Fpr) From Escherichia Coli
Length = 266
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 340 YSNTLTFLIKSYEDGLLSPLLCGLREGQELE-VSSPEGKFDVGLIGKRNKLVLLAAGTGL 398
Y+N ++K G LSP L L+ G E++ VS G F + + L +LA GT +
Sbjct: 82 YTNDAGEVVK----GKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPHCETLWMLATGTAI 137
Query: 399 TPMIPVINWSIQSQR-QSVQLVFFNRTEQDIIW 430
P + ++ R +++ LV R D+ +
Sbjct: 138 GPYLSILRLGKDLDRFKNLVLVHAARYAADLSY 170
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGIAPM 154
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 154
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 162
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 163
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 163
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 162
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 162
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 162
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKKMLLPDDPEANVIMLATGTGIAPM 162
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 163
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 163
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 163
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 163
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 154
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 154
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 163
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 154
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 162
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 163
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPM 163
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 354 GLLSPLLCGLREGQELEVSSPEGKFDVGLIGKRNKLVLLAAGTGLTPM 401
G+ S L + G E++++ P GK + +++LA GTG+ PM
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPLGKEMLLPDDPEANVIMLATGTGIAPM 154
>pdb|3HM0|A Chain A, Crystal Structure Of Probable Thioesterase From Bartonella
Henselae
pdb|3HM0|B Chain B, Crystal Structure Of Probable Thioesterase From Bartonella
Henselae
pdb|3HM0|C Chain C, Crystal Structure Of Probable Thioesterase From Bartonella
Henselae
pdb|3HM0|D Chain D, Crystal Structure Of Probable Thioesterase From Bartonella
Henselae
Length = 167
Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 70 GVVYNVTRYMDFHPGGREELMRGAGMDATELFNKV 104
GVVY+ RY++F GR E +R G + T L + V
Sbjct: 52 GVVYH-ARYLEFFERGRSEFLRDTGFNNTLLASGV 85
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,380,279
Number of Sequences: 62578
Number of extensions: 496485
Number of successful extensions: 1021
Number of sequences better than 100.0: 117
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 921
Number of HSP's gapped (non-prelim): 117
length of query: 527
length of database: 14,973,337
effective HSP length: 103
effective length of query: 424
effective length of database: 8,527,803
effective search space: 3615788472
effective search space used: 3615788472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)