Query psy8249
Match_columns 232
No_of_seqs 171 out of 1828
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 22:31:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8249.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8249hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ok3_A Peptidyl-prolyl CIS-tra 100.0 4.7E-50 1.6E-54 310.0 15.3 159 1-209 1-160 (161)
2 2poe_A Cyclophilin-like protei 100.0 7.3E-49 2.5E-53 309.1 15.0 159 1-209 17-179 (185)
3 2fu0_A Cyclophilin, putative; 100.0 1.4E-48 4.7E-53 301.2 14.8 155 1-205 6-160 (160)
4 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.6E-48 9E-53 301.3 15.3 154 1-204 12-165 (166)
5 2b71_A Cyclophilin-like protei 100.0 3.3E-48 1.1E-52 307.2 14.6 157 1-207 39-195 (196)
6 1zkc_A Peptidyl-prolyl CIS-tra 100.0 5.8E-48 2E-52 305.7 15.2 159 2-210 21-180 (197)
7 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.5E-47 5.1E-52 305.8 14.5 167 2-211 8-179 (201)
8 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.4E-47 4.7E-52 304.7 13.8 162 1-212 12-173 (203)
9 2a2n_A Peptidylprolyl isomeras 100.0 8.1E-47 2.8E-51 295.2 14.7 153 1-203 22-175 (176)
10 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.4E-46 4.6E-51 295.1 14.3 154 1-204 14-179 (179)
11 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.5E-46 5.2E-51 294.3 12.9 148 7-204 22-177 (177)
12 2hq6_A Serologically defined c 100.0 6.4E-46 2.2E-50 292.0 16.0 157 2-209 26-184 (185)
13 1a58_A Cyclophilin; isomerase, 100.0 3.2E-46 1.1E-50 292.6 14.2 153 2-204 12-176 (177)
14 2he9_A NK-tumor recognition pr 100.0 5.4E-46 1.9E-50 294.1 14.3 156 1-206 24-191 (192)
15 2haq_A Cyclophilin; rotamase, 100.0 4.4E-46 1.5E-50 289.7 12.9 152 1-204 16-172 (172)
16 2cmt_A Peptidyl-prolyl CIS-tra 100.0 9.5E-46 3.2E-50 288.3 14.4 148 7-205 22-172 (172)
17 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.1E-45 3.7E-50 291.9 14.2 151 1-204 24-191 (191)
18 1qng_A Peptidyl-prolyl CIS-tra 100.0 7.7E-46 2.6E-50 288.7 13.1 147 7-204 15-170 (170)
19 3pmp_A Cyclophilin A; peptidyl 100.0 1.3E-45 4.3E-50 286.3 14.1 153 1-204 7-163 (164)
20 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.3E-45 4.4E-50 286.1 13.9 149 6-205 14-165 (165)
21 2igv_A Peptidyl-prolyl CIS-tra 100.0 1.6E-45 5.4E-50 287.7 13.6 148 7-205 15-172 (173)
22 2r99_A Peptidyl-prolyl CIS-tra 100.0 2E-45 6.9E-50 286.9 14.1 149 6-205 22-173 (173)
23 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.2E-45 4E-50 291.5 12.8 156 2-208 21-183 (188)
24 3s6m_A Peptidyl-prolyl CIS-tra 100.0 2E-45 6.7E-50 286.3 13.5 151 1-204 4-167 (167)
25 3bkp_A Cyclophilin; malaria, i 100.0 4.3E-45 1.5E-49 296.4 14.3 158 1-209 22-197 (232)
26 4fru_A Cyclophilin B, peptidyl 100.0 3.6E-45 1.2E-49 288.8 12.7 153 7-209 24-181 (185)
27 1lop_A Cyclophilin A; rotamase 100.0 2E-45 6.8E-50 285.1 10.5 151 2-205 1-164 (164)
28 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.3E-44 4.6E-49 284.7 13.1 146 7-203 31-186 (186)
29 3rdd_A Peptidyl-prolyl CIS-tra 100.0 3.2E-44 1.1E-48 282.6 14.9 153 2-205 24-184 (184)
30 1v9t_A Cyclophilin B; beta bar 100.0 1.2E-44 4.1E-49 281.3 12.0 152 1-205 5-166 (166)
31 2c3b_A Ppiase, cyclophilin; is 100.0 3.8E-45 1.3E-49 285.1 8.5 147 7-204 19-172 (172)
32 3k2c_A Peptidyl-prolyl CIS-tra 100.0 4.5E-44 1.5E-48 283.5 14.3 154 2-206 33-192 (193)
33 1z81_A Cyclophilin; structural 100.0 6.1E-44 2.1E-48 288.3 14.1 148 7-204 71-229 (229)
34 2ose_A Probable peptidyl-proly 100.0 5.2E-44 1.8E-48 290.7 11.1 155 1-208 19-210 (234)
35 1ihg_A Cyclophilin 40; ppiase 100.0 4.9E-40 1.7E-44 286.7 14.2 154 3-207 18-187 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.5E-35 5.1E-40 253.5 14.3 151 3-184 173-345 (369)
37 3bo7_A Peptidyl-prolyl CIS-tra 99.9 1.4E-23 4.6E-28 167.3 5.1 139 57-231 13-156 (201)
38 2ok3_A Peptidyl-prolyl CIS-tra 99.9 1.4E-23 4.7E-28 161.8 4.8 132 57-231 7-138 (161)
39 2fu0_A Cyclophilin, putative; 99.9 1.5E-23 5.1E-28 161.3 4.9 132 57-231 12-143 (160)
40 2x7k_A Peptidyl-prolyl CIS-tra 99.9 1.7E-23 5.9E-28 161.9 4.4 132 57-231 18-149 (166)
41 2poe_A Cyclophilin-like protei 99.9 1.8E-23 6.2E-28 164.3 4.6 133 57-231 23-158 (185)
42 3pmp_A Cyclophilin A; peptidyl 99.9 1.1E-22 3.6E-27 157.4 8.4 142 47-231 4-148 (164)
43 2wfi_A Peptidyl-prolyl CIS-tra 99.9 1E-22 3.4E-27 159.5 8.2 142 47-231 11-163 (179)
44 1zkc_A Peptidyl-prolyl CIS-tra 99.9 3.5E-23 1.2E-27 163.7 5.2 132 57-231 26-157 (197)
45 1a58_A Cyclophilin; isomerase, 99.9 1.4E-22 4.9E-27 158.4 8.5 142 47-231 8-160 (177)
46 2haq_A Cyclophilin; rotamase, 99.9 5.3E-23 1.8E-27 159.7 5.9 141 47-231 13-156 (172)
47 1mzw_A Cyclophilin H, U-snRNP- 99.9 8.9E-23 3E-27 159.5 7.0 142 47-231 12-161 (177)
48 1w74_A Peptidyl-prolyl CIS-tra 99.9 6.3E-23 2.2E-27 161.8 5.9 129 57-231 30-175 (191)
49 2b71_A Cyclophilin-like protei 99.9 6.1E-23 2.1E-27 162.3 5.2 132 57-231 45-176 (196)
50 2he9_A NK-tumor recognition pr 99.9 2.2E-22 7.5E-27 158.9 8.4 144 45-231 19-173 (192)
51 2a2n_A Peptidylprolyl isomeras 99.9 5.7E-23 2E-27 160.2 5.0 131 57-230 28-158 (176)
52 2k7n_A Peptidyl-prolyl CIS-tra 99.9 5.5E-23 1.9E-27 163.2 4.4 132 57-231 18-149 (203)
53 3k2c_A Peptidyl-prolyl CIS-tra 99.9 2.9E-22 1E-26 158.4 8.4 143 46-231 28-173 (193)
54 2cmt_A Peptidyl-prolyl CIS-tra 99.9 3.3E-22 1.1E-26 155.4 8.4 142 47-231 12-156 (172)
55 4fru_A Cyclophilin B, peptidyl 99.9 2.5E-22 8.4E-27 158.2 7.6 142 47-231 14-158 (185)
56 2z6w_A Peptidyl-prolyl CIS-tra 99.9 3.7E-22 1.3E-26 154.3 7.9 141 47-230 5-148 (165)
57 3s6m_A Peptidyl-prolyl CIS-tra 99.9 6.4E-23 2.2E-27 159.2 3.6 130 57-231 10-147 (167)
58 1v9t_A Cyclophilin B; beta bar 99.9 1.2E-22 4E-27 157.5 5.0 129 57-230 11-144 (166)
59 2r99_A Peptidyl-prolyl CIS-tra 99.9 5.7E-22 1.9E-26 154.3 8.7 142 47-231 13-157 (173)
60 3rdd_A Peptidyl-prolyl CIS-tra 99.9 4.5E-22 1.5E-26 156.3 7.6 142 47-231 24-168 (184)
61 1lop_A Cyclophilin A; rotamase 99.9 1.1E-22 3.8E-27 157.3 4.0 129 57-230 6-142 (164)
62 3ich_A Peptidyl-prolyl CIS-tra 99.9 2.6E-22 9E-27 158.1 6.2 142 47-231 17-161 (188)
63 1qng_A Peptidyl-prolyl CIS-tra 99.9 4.3E-22 1.5E-26 154.7 7.1 141 47-230 5-154 (170)
64 2igv_A Peptidyl-prolyl CIS-tra 99.9 5.8E-22 2E-26 154.4 7.6 142 47-231 5-156 (173)
65 2poy_A Peptidyl-prolyl CIS-tra 99.8 1.1E-21 3.9E-26 154.1 7.2 141 47-230 21-171 (186)
66 1z81_A Cyclophilin; structural 99.8 2.5E-21 8.7E-26 156.2 6.6 142 47-231 61-212 (229)
67 3rfy_A Peptidyl-prolyl CIS-tra 99.8 6.3E-21 2.1E-25 163.2 6.1 149 57-227 185-345 (369)
68 2ose_A Probable peptidyl-proly 99.8 2.9E-21 1E-25 156.8 3.5 145 47-231 16-190 (234)
69 2c3b_A Ppiase, cyclophilin; is 99.8 2.9E-21 9.9E-26 150.2 2.8 133 56-231 18-155 (172)
70 3bkp_A Cyclophilin; malaria, i 99.8 5.9E-21 2E-25 154.7 4.7 134 57-231 28-176 (232)
71 1ihg_A Cyclophilin 40; ppiase 99.8 8.7E-20 3E-24 158.7 7.1 140 48-230 18-168 (370)
72 2hq6_A Serologically defined c 99.8 5.2E-20 1.8E-24 144.5 4.9 131 57-231 31-163 (185)
73 2nnz_A Hypothetical protein; b 71.9 2.7 9.3E-05 31.2 3.0 32 1-32 30-61 (153)
74 2khf_A PLNJ; anti-microbial, b 52.6 3.7 0.00013 19.9 0.4 17 25-41 3-19 (26)
75 3kop_A Uncharacterized protein 48.3 11 0.00039 28.5 2.7 22 11-32 34-55 (188)
76 2ks0_A Uncharacterized protein 27.6 50 0.0017 20.9 2.8 14 2-15 22-35 (71)
No 1
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=4.7e-50 Score=310.04 Aligned_cols=159 Identities=72% Similarity=1.200 Sum_probs=147.1
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
|+|+|+|++|+|+|+||++.||+|++||++||+.+||+++.||||+++||+||||++..|.
T Consensus 1 m~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~------------------- 61 (161)
T 2ok3_A 1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGR------------------- 61 (161)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSS-------------------
T ss_pred CEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCC-------------------
Confidence 9999999999999999999999999999999999999999999999999999999863331
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCC
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAH 160 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ 160 (232)
++.++++..+++|..+.++|+++|+|+||++++++++|||||+++++||
T Consensus 62 -------------------------------gg~si~g~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~ 110 (161)
T 2ok3_A 62 -------------------------------GGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPH 110 (161)
T ss_dssp -------------------------------CCCCTTSSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGG
T ss_pred -------------------------------CCCcccCCccccccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCc
Confidence 2235567778888877899999999999999999999999999999999
Q ss_pred CCCCccEEEEEeeccchhhhcccCCCCCC-CCceeeEEEeeeeecCCCCc
Q psy8249 161 LDLKYTIFGKVIDGFETLDNLEKLPVNPN-HKPIFFITYAAHAHLDLKYT 209 (232)
Q Consensus 161 ld~~~tvfG~VveG~dvl~~I~~~~~~~~-~~P~~~i~I~~~~~ld~~~~ 209 (232)
||++|+|||+|++|||+|++|++++++++ ++|..+|+|.+|..++++|.
T Consensus 111 Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~~Pf~ 160 (161)
T 2ok3_A 111 LDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 160 (161)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEECCSCC
T ss_pred cCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEecCCCC
Confidence 99999999999999999999999999987 99999999999999999874
No 2
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=7.3e-49 Score=309.07 Aligned_cols=159 Identities=55% Similarity=0.929 Sum_probs=145.3
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
|.|.|+|++|+|+|+||++.||+||+||++||+.+||+++.||||+++||+||||++..|.
T Consensus 17 ~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~------------------- 77 (185)
T 2poe_A 17 QGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGK------------------- 77 (185)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSS-------------------
T ss_pred eEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCC-------------------
Confidence 6899999999999999999999999999999999999999999999999999999763331
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccC----CCcccceEEeecc
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNG----PNTNASQFFITYA 156 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~----~~~~~s~f~itl~ 156 (232)
++.++++..+++|..+.++|+++|+|+||+++ |++++|||||+++
T Consensus 78 -------------------------------gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~ 126 (185)
T 2poe_A 78 -------------------------------GGESIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYS 126 (185)
T ss_dssp -------------------------------CCCBTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESS
T ss_pred -------------------------------CCCccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECC
Confidence 22345677788888778999999999999998 9999999999999
Q ss_pred CCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCc
Q psy8249 157 AHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYT 209 (232)
Q Consensus 157 ~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~ 209 (232)
++|+||++|+|||+|++|||||++|++++++.+++|..+|+|.+|.+++++|.
T Consensus 127 ~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~~dPf~ 179 (185)
T 2poe_A 127 SLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHSNPIA 179 (185)
T ss_dssp CCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEEEEECCC--
T ss_pred CCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEECCCCC
Confidence 99999999999999999999999999999998999999999999999998875
No 3
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.4e-48 Score=301.17 Aligned_cols=155 Identities=48% Similarity=0.775 Sum_probs=141.8
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
+.|+|+|++|+|+|+||++.||+|++||++||+.+||+++.||||+++||+||||++..|
T Consensus 6 ~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g-------------------- 65 (160)
T 2fu0_A 6 KSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDG-------------------- 65 (160)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSS--------------------
T ss_pred CEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCC--------------------
Confidence 579999999999999999999999999999999999999999999999999999976322
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCC
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAH 160 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ 160 (232)
.++.++++..+++|..+.++|+++|+|+||+++|++++|||||++.++||
T Consensus 66 ------------------------------~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~ 115 (160)
T 2fu0_A 66 ------------------------------TGGESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPW 115 (160)
T ss_dssp ------------------------------SCCCCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGG
T ss_pred ------------------------------CCCCcccCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCc
Confidence 12235667778889887899988999999999999999999999999999
Q ss_pred CCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecC
Q psy8249 161 LDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLD 205 (232)
Q Consensus 161 ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld 205 (232)
||++|+|||+|++|||||++|++++++++++|..+|+|.+|..++
T Consensus 116 Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~~ 160 (160)
T 2fu0_A 116 LDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKINN 160 (160)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC-
T ss_pred cCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEeC
Confidence 999999999999999999999999999899999999999998764
No 4
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.6e-48 Score=301.31 Aligned_cols=154 Identities=45% Similarity=0.740 Sum_probs=141.8
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
|.|.|+|++|+|+|+||++.||+|++||++||+.+||+++.||||+++||+|+||++..|.
T Consensus 12 ~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~------------------- 72 (166)
T 2x7k_A 12 PNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGR------------------- 72 (166)
T ss_dssp SEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSS-------------------
T ss_pred CEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCC-------------------
Confidence 5799999999999999999999999999999999999999999999999999999763332
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCC
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAH 160 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ 160 (232)
++.++++..+++|..+.++|.++|+|+||+++|++++|||||+++++||
T Consensus 73 -------------------------------gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~ 121 (166)
T 2x7k_A 73 -------------------------------GGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQW 121 (166)
T ss_dssp -------------------------------CCCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGG
T ss_pred -------------------------------CCCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCc
Confidence 2335567778888877899988999999999999999999999999999
Q ss_pred CCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeec
Q psy8249 161 LDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHL 204 (232)
Q Consensus 161 ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l 204 (232)
||++|+|||+|++|||+|++|++.+++++++|..+|+|.+|.++
T Consensus 122 Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 122 LDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPS 165 (166)
T ss_dssp GTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEEEEEC
T ss_pred cCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEe
Confidence 99999999999999999999999999988999999999999865
No 5
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3.3e-48 Score=307.17 Aligned_cols=157 Identities=45% Similarity=0.776 Sum_probs=141.6
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
|.|.|+|++|+|+|+||++.||+||+||++||+.+||+++.||||+++||+||||++..|.
T Consensus 39 ~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~------------------- 99 (196)
T 2b71_A 39 GYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGK------------------- 99 (196)
T ss_dssp CEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSS-------------------
T ss_pred cEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCC-------------------
Confidence 5799999999999999999999999999999999999999999999999999999763332
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCC
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAH 160 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ 160 (232)
++.++++..+++|..+.++|+++|+|+||+++|++++|||||+++++||
T Consensus 100 -------------------------------gg~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~ 148 (196)
T 2b71_A 100 -------------------------------GGKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPH 148 (196)
T ss_dssp -------------------------------CCCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGG
T ss_pred -------------------------------CCCccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCc
Confidence 2235566778888777899999999999999999999999999999999
Q ss_pred CCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCC
Q psy8249 161 LDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLK 207 (232)
Q Consensus 161 ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~ 207 (232)
||++|+|||+|++|||||++|++++++.+++|..+|+|.+|.++++|
T Consensus 149 LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~i~~dP 195 (196)
T 2b71_A 149 LDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILRTSTAVNA 195 (196)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEEEEC----
T ss_pred cCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEEEEEecCC
Confidence 99999999999999999999999999999999999999999998764
No 6
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=5.8e-48 Score=305.73 Aligned_cols=159 Identities=51% Similarity=0.926 Sum_probs=145.7
Q ss_pred EEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhhh
Q psy8249 2 SVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLAL 81 (232)
Q Consensus 2 ~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l 81 (232)
.|+|+|++|+|+|+||++.||+||+||++||+.+||+++.||||+++||+||||++..|.
T Consensus 21 ~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~-------------------- 80 (197)
T 1zkc_A 21 YVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGT-------------------- 80 (197)
T ss_dssp EEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSS--------------------
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCC--------------------
Confidence 589999999999999999999999999999999999999999999999999999763331
Q ss_pred ccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCC
Q psy8249 82 CASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHL 161 (232)
Q Consensus 82 ~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~l 161 (232)
++.++++..+++|....++|+.+|+|+||+.++++++|||||++.++|+|
T Consensus 81 ------------------------------Gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~L 130 (197)
T 1zkc_A 81 ------------------------------GGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYL 130 (197)
T ss_dssp ------------------------------CCCBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGG
T ss_pred ------------------------------CCCccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCcc
Confidence 22345667788887778899999999999999999999999999999999
Q ss_pred CCCccEEEEEeeccchhhhcccCCCCCC-CCceeeEEEeeeeecCCCCcc
Q psy8249 162 DLKYTIFGKVIDGFETLDNLEKLPVNPN-HKPIFFITYAAHAHLDLKYTI 210 (232)
Q Consensus 162 d~~~tvfG~VveG~dvl~~I~~~~~~~~-~~P~~~i~I~~~~~ld~~~~~ 210 (232)
|++|+|||+|++|||||++|++++++.+ ++|..+|+|.+|++++++|.-
T Consensus 131 Dg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~~dPf~d 180 (197)
T 1zkc_A 131 DKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYEE 180 (197)
T ss_dssp TTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEEECTTHH
T ss_pred CCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEEcCCccc
Confidence 9999999999999999999999999987 999999999999999988764
No 7
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-47 Score=305.79 Aligned_cols=167 Identities=34% Similarity=0.606 Sum_probs=141.5
Q ss_pred EEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeC-----CCccccccceeccccCCCCcch
Q psy8249 2 SVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTG-----DPTHTGDIKIELFCEDCPKTCE 76 (232)
Q Consensus 2 ~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~G-----d~t~~G~i~i~l~~~~~P~~~~ 76 (232)
.|+|+|++|+|+|+||++.||+||+||++||+.+||+++.||||+++||+||| |++..|...-.+|...
T Consensus 8 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~------ 81 (201)
T 3bo7_A 8 YLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSIS------ 81 (201)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCC------
T ss_pred EEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCccccccc------
Confidence 58999999999999999999999999999999999999999999999999999 8764443222111100
Q ss_pred hhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeecc
Q psy8249 77 NFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYA 156 (232)
Q Consensus 77 ~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~ 156 (232)
+ + ..+..+++|..+.++|+.+|+|+||+++|++++|||||+++
T Consensus 82 -------------------------~-~-----------~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~ 124 (201)
T 3bo7_A 82 -------------------------G-F-----------PGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFK 124 (201)
T ss_dssp -------------------------S-S-----------TTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESS
T ss_pred -------------------------c-c-----------cCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECC
Confidence 0 0 01556778877789999999999999999999999999999
Q ss_pred CCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCccc
Q psy8249 157 AHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIF 211 (232)
Q Consensus 157 ~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~f 211 (232)
++||||++|+|||+|++|||||++|++++++.+++|..+|+|.+|++++++|.-.
T Consensus 125 ~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~v~~dPf~d~ 179 (201)
T 3bo7_A 125 SCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEEIIVFKNPFEDA 179 (201)
T ss_dssp CCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCBEEEEEEEECCC---
T ss_pred CCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEEcCCccCH
Confidence 9999999999999999999999999999999999999999999999999987643
No 8
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.4e-47 Score=304.66 Aligned_cols=162 Identities=43% Similarity=0.681 Sum_probs=147.3
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
|.|.|+|++|+|+|+||++.||+||+||++||+.+||+++.||||+++||+|+||++..|.
T Consensus 12 ~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~------------------- 72 (203)
T 2k7n_A 12 PNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGR------------------- 72 (203)
T ss_dssp SEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSS-------------------
T ss_pred CEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCC-------------------
Confidence 5799999999999999999999999999999999999999999999999999999763332
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCC
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAH 160 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ 160 (232)
++.++++..+++|+.+.++|.++|+|+||+.++++++|||||++.++||
T Consensus 73 -------------------------------gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~ 121 (203)
T 2k7n_A 73 -------------------------------GGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQW 121 (203)
T ss_dssp -------------------------------CCCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCS
T ss_pred -------------------------------CCCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCc
Confidence 2234566778888877899988999999999999999999999999999
Q ss_pred CCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccc
Q psy8249 161 LDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFG 212 (232)
Q Consensus 161 ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg 212 (232)
||++|+|||+|++|||||++|++++++++++|..+|+|.+|.+++.+..--|
T Consensus 122 LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~~~v~~~~~s~~g 173 (203)
T 2k7n_A 122 LDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSGGGGSGGG 173 (203)
T ss_dssp STTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEEEEECCCCCCCCC
T ss_pred cCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEEecCCCCCC
Confidence 9999999999999999999999999998899999999999999998765443
No 9
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=8.1e-47 Score=295.17 Aligned_cols=153 Identities=49% Similarity=0.795 Sum_probs=139.6
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
+.|+++|++|+|+|+||++.||+||+||++||+.+||+++.||||+++||+|+||++..|
T Consensus 22 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g-------------------- 81 (176)
T 2a2n_A 22 DSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTG-------------------- 81 (176)
T ss_dssp SEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSS--------------------
T ss_pred CEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCC--------------------
Confidence 368999999999999999999999999999999999999999999999999999975322
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCC
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAH 160 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ 160 (232)
.++.++++..+++|..+.++|+++|+|+||+.+|++++|||||++.++||
T Consensus 82 ------------------------------~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~ 131 (176)
T 2a2n_A 82 ------------------------------MGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPW 131 (176)
T ss_dssp ------------------------------SCCCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGG
T ss_pred ------------------------------CCCCcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCc
Confidence 12335667778888887899999999999999999999999999999999
Q ss_pred CCCCccEEEEEeeccchhhhcccCCCC-CCCCceeeEEEeeeee
Q psy8249 161 LDLKYTIFGKVIDGFETLDNLEKLPVN-PNHKPIFFITYAAHAH 203 (232)
Q Consensus 161 ld~~~tvfG~VveG~dvl~~I~~~~~~-~~~~P~~~i~I~~~~~ 203 (232)
||++|+|||+|++|||||++|++++++ .+++|..+|+|.+|.+
T Consensus 132 LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 132 LDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred cCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 999999999999999999999999998 6899999999998854
No 10
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=1.4e-46 Score=295.09 Aligned_cols=154 Identities=41% Similarity=0.730 Sum_probs=134.8
Q ss_pred CEEEE-EeCCeeEEEEeecCCCchhHHhHHHhhh-----------cCcccceeeeeecceeEEeeCCCccccccceeccc
Q psy8249 1 MSVSL-HTDVGDIKIELFCEDCPKTCENFLALCA-----------SDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFC 68 (232)
Q Consensus 1 ~~v~~-~t~~G~i~i~L~~~~~p~~~~nf~~l~~-----------~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~ 68 (232)
|.|.+ +|++|+|+|+||++.||+||+||++||+ .+||+++.||||+++||||+||++.
T Consensus 14 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~---------- 83 (179)
T 2wfi_A 14 FDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSE---------- 83 (179)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT----------
T ss_pred EEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccC----------
Confidence 34555 7899999999999999999999999996 5678888888888888888888641
Q ss_pred cCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCccc
Q psy8249 69 EDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNA 148 (232)
Q Consensus 69 ~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~ 148 (232)
.++.++.++++..+++|.. .++|+++|+|+||+++|++++
T Consensus 84 ---------------------------------------~~g~gg~si~g~~f~dE~~-~~~h~~~G~lsMAn~gp~tng 123 (179)
T 2wfi_A 84 ---------------------------------------GNGRGGESIYGGFFEDESF-AVKHNKEFLLSMANRGKDTNG 123 (179)
T ss_dssp ---------------------------------------SSSSCCCCTTSSCBCCCCC-CSCCCSTTEEEECCSSTTCBC
T ss_pred ---------------------------------------CCCCCCCcccCCccccccc-CcCcCCCeEEEEEeCCCCCcc
Confidence 1122344666777888865 688989999999999999999
Q ss_pred ceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeec
Q psy8249 149 SQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHL 204 (232)
Q Consensus 149 s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l 204 (232)
|||||++.++||||++|+|||+|++|||||++|++++++.+++|..+|+|.+|+.|
T Consensus 124 SQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 124 SQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 179 (179)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCEEEEEEEEC
T ss_pred eEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCeEEEeCeeC
Confidence 99999999999999999999999999999999999999999999999999999976
No 11
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.5e-46 Score=294.29 Aligned_cols=148 Identities=43% Similarity=0.767 Sum_probs=133.6
Q ss_pred eCCeeEEEEeecCCCchhHHhHHHhhhcCc--------ccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhh
Q psy8249 7 TDVGDIKIELFCEDCPKTCENFLALCASDY--------YNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENF 78 (232)
Q Consensus 7 t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~--------y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F 78 (232)
|++|+|+|+||++.||+||+||++||+.++ |+++.|||++++||+|+||++.
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~-------------------- 81 (177)
T 1mzw_A 22 QEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVN-------------------- 81 (177)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTT--------------------
T ss_pred eeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCccc--------------------
Confidence 679999999999999999999999999998 9999999999999999999751
Q ss_pred hhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCC
Q psy8249 79 LALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAH 158 (232)
Q Consensus 79 ~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~ 158 (232)
..+.++.++++..+++|.. .++|+++|+|+||+++|++++|||||++.++
T Consensus 82 -----------------------------~~G~gg~si~g~~f~dE~~-~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~ 131 (177)
T 1mzw_A 82 -----------------------------GDGTGVASIYRGPFADENF-KLRHSAPGLLSMANSGPSTNGCQFFITCSKC 131 (177)
T ss_dssp -----------------------------SSSCCCCCTTSSCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSCC
T ss_pred -----------------------------CCCCCCCccCCCcccCccc-ccccCCCCEEEEccCCCCCcceEEEEECCCC
Confidence 0112334566777888864 7889889999999999999999999999999
Q ss_pred CCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeec
Q psy8249 159 AHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHL 204 (232)
Q Consensus 159 ~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l 204 (232)
||||++|+|||+|++|||||++|++++++.+++|..+|+|.+|+.|
T Consensus 132 ~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 132 DWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177 (177)
T ss_dssp GGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred CccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCEEEEeceeC
Confidence 9999999999999999999999999999989999999999999976
No 12
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=6.4e-46 Score=292.04 Aligned_cols=157 Identities=43% Similarity=0.745 Sum_probs=142.9
Q ss_pred EEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhhh
Q psy8249 2 SVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLAL 81 (232)
Q Consensus 2 ~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l 81 (232)
.|.|+|++|+|+|+||++.||+|++||++||+.+||+++.||||+++||+|+||++..|.
T Consensus 26 ~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~-------------------- 85 (185)
T 2hq6_A 26 KVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGS-------------------- 85 (185)
T ss_dssp EEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSS--------------------
T ss_pred EEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCC--------------------
Confidence 689999999999999999999999999999999999999999999999999999763221
Q ss_pred ccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCC
Q psy8249 82 CASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHL 161 (232)
Q Consensus 82 ~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~l 161 (232)
++.++++..+++|..+.++|+.+|+|+||++++++++|||||+++++|+|
T Consensus 86 ------------------------------gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~L 135 (185)
T 2hq6_A 86 ------------------------------GGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADEL 135 (185)
T ss_dssp ------------------------------CCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGG
T ss_pred ------------------------------CCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCcc
Confidence 22355677788888778899999999999999999999999999999999
Q ss_pred CCCccEEEEEeeccchh--hhcccCCCCCCCCceeeEEEeeeeecCCCCc
Q psy8249 162 DLKYTIFGKVIDGFETL--DNLEKLPVNPNHKPIFFITYAAHAHLDLKYT 209 (232)
Q Consensus 162 d~~~tvfG~VveG~dvl--~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~ 209 (232)
|++|+|||+|+ |++++ ++|++++++.+++|..+|+|.+|+.++++|.
T Consensus 136 Dg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~~~~v~~~Pf~ 184 (185)
T 2hq6_A 136 NNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFD 184 (185)
T ss_dssp TTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEEEEEEEECTTC
T ss_pred CCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEEEEEEeCCCCC
Confidence 99999999999 88875 6899999999999999999999999999874
No 13
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=3.2e-46 Score=292.63 Aligned_cols=153 Identities=43% Similarity=0.721 Sum_probs=134.6
Q ss_pred EEEE-EeCCeeEEEEeecCCCchhHHhHHHhhhc--------C---cccceeeeeecceeEEeeCCCccccccceecccc
Q psy8249 2 SVSL-HTDVGDIKIELFCEDCPKTCENFLALCAS--------D---YYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCE 69 (232)
Q Consensus 2 ~v~~-~t~~G~i~i~L~~~~~p~~~~nf~~l~~~--------~---~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~ 69 (232)
.+.+ .|++|+|+|+||++.||+||+||++||+. + ||+++.||||+++||+|+||++.
T Consensus 12 di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~----------- 80 (177)
T 1a58_A 12 DVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTK----------- 80 (177)
T ss_dssp EEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSS-----------
T ss_pred EEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccC-----------
Confidence 3444 57899999999999999999999999985 3 89999999999999999998651
Q ss_pred CCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccc
Q psy8249 70 DCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNAS 149 (232)
Q Consensus 70 ~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s 149 (232)
.++.++.++++..+++|.. .++|+++|+|+||+++|++++|
T Consensus 81 --------------------------------------~~g~gg~si~g~~f~dE~~-~~~h~~~G~lsmAn~gp~tngS 121 (177)
T 1a58_A 81 --------------------------------------GDGTGGESIYGGMFDDEEF-VMKHDEPFVVSMANKGPNTNGS 121 (177)
T ss_dssp --------------------------------------SSSSCCCCTTSSCBCCCCC-CSCCCSSSEEEECCSSTTCBCS
T ss_pred --------------------------------------CCCCCCCcccCCcccCccc-CcccCCCeEEEEeeCCCCCcee
Confidence 1122334566777778865 6889899999999999999999
Q ss_pred eEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeec
Q psy8249 150 QFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHL 204 (232)
Q Consensus 150 ~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l 204 (232)
||||++.++||||++|+|||+|++|||||++|++++++++++|..+|+|.+|+.|
T Consensus 122 QFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~G~l 176 (177)
T 1a58_A 122 QFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGEL 176 (177)
T ss_dssp CEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEE
T ss_pred EEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCeEEEEeEEE
Confidence 9999999999999999999999999999999999999999999999999999987
No 14
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-46 Score=294.08 Aligned_cols=156 Identities=42% Similarity=0.717 Sum_probs=136.1
Q ss_pred CEEEE-EeCCeeEEEEeecCCCchhHHhHHHhhh-----------cCcccceeeeeecceeEEeeCCCccccccceeccc
Q psy8249 1 MSVSL-HTDVGDIKIELFCEDCPKTCENFLALCA-----------SDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFC 68 (232)
Q Consensus 1 ~~v~~-~t~~G~i~i~L~~~~~p~~~~nf~~l~~-----------~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~ 68 (232)
|+|.+ +|++|+|+|+||++.||+||+||++||+ .+||+++.||||+++||||+||++.
T Consensus 24 ~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~---------- 93 (192)
T 2he9_A 24 FDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE---------- 93 (192)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT----------
T ss_pred EEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccC----------
Confidence 45655 7899999999999999999999999995 5678888888888888888888641
Q ss_pred cCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCccc
Q psy8249 69 EDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNA 148 (232)
Q Consensus 69 ~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~ 148 (232)
.++.++.++++..+++|.. .++|+++|+|+||+.+|++++
T Consensus 94 ---------------------------------------~~G~gg~siyg~~f~dE~~-~l~h~~~G~lsMAn~gp~tng 133 (192)
T 2he9_A 94 ---------------------------------------GNGKGGESIYGGYFKDENF-ILKHDRAFLLSMANRGKHTNG 133 (192)
T ss_dssp ---------------------------------------SSSSCCCCTTSSCBCCCCC-CSCCCSTTEEEECCSSTTCBC
T ss_pred ---------------------------------------CCCCCCCcccCCcccCccc-cCCCCCCeEEEEEeCCCCCcc
Confidence 1223344667777888865 688989999999999999999
Q ss_pred ceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCC
Q psy8249 149 SQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDL 206 (232)
Q Consensus 149 s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~ 206 (232)
|||||++.++||||++|+|||+|++|||||++|++++++++++|..+|+|.+|+.|..
T Consensus 134 SQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 134 SQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEECC-
T ss_pred eEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCeEEEEeEEEcc
Confidence 9999999999999999999999999999999999999999999999999999998863
No 15
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=4.4e-46 Score=289.74 Aligned_cols=152 Identities=45% Similarity=0.740 Sum_probs=136.1
Q ss_pred CEEEE-EeCCeeEEEEeecCCCchhHHhHHHhh--hcCc-ccceeeeeecceeEEeeCCCc-cccccceeccccCCCCcc
Q psy8249 1 MSVSL-HTDVGDIKIELFCEDCPKTCENFLALC--ASDY-YNGCIFHRNIKGFIVQTGDPT-HTGDIKIELFCEDCPKTC 75 (232)
Q Consensus 1 ~~v~~-~t~~G~i~i~L~~~~~p~~~~nf~~l~--~~~~-y~~~~f~rvi~~f~iq~Gd~t-~~G~i~i~l~~~~~P~~~ 75 (232)
|+|.+ +|++|+|+|+||++.||+|++||++|| +.+| |+++.|||++++||+||||.+ ..|
T Consensus 16 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g--------------- 80 (172)
T 2haq_A 16 FDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDG--------------- 80 (172)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSS---------------
T ss_pred EEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCC---------------
Confidence 45666 799999999999999999999999999 7899 999999999999999999943 111
Q ss_pred hhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeec
Q psy8249 76 ENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITY 155 (232)
Q Consensus 76 ~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl 155 (232)
.++.++++..+++|. ..++|. +|+|+||+++|++++|||||++
T Consensus 81 -----------------------------------~gg~si~g~~f~dE~-~~l~h~-~G~lsmAn~gp~tngSQFfIt~ 123 (172)
T 2haq_A 81 -----------------------------------TGGKSIYGEKFADEN-LNVKHF-VGALSMANAGPNTNGSQFFITT 123 (172)
T ss_dssp -----------------------------------SCCCCSSSSCBCCCC-CCSCCC-TTEEEECCSSTTCBCSCEEEES
T ss_pred -----------------------------------CCCccccCCcccCcC-CCcccC-ceEEEEccCCCCCcccEEEEEC
Confidence 223456677788884 478887 9999999999999999999999
Q ss_pred cCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeec
Q psy8249 156 AAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHL 204 (232)
Q Consensus 156 ~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l 204 (232)
.++|+||++|+|||+|++|||||++|++++++++++|..+|+|.+|+.|
T Consensus 124 ~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 124 APTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVKIVASGEL 172 (172)
T ss_dssp SCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred CCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeEEEEeEEC
Confidence 9999999999999999999999999999999988999999999999976
No 16
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=9.5e-46 Score=288.33 Aligned_cols=148 Identities=41% Similarity=0.675 Sum_probs=132.1
Q ss_pred eCCeeEEEEeecCCCchhHHhHHHhhhc--Cc-ccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhhhcc
Q psy8249 7 TDVGDIKIELFCEDCPKTCENFLALCAS--DY-YNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCA 83 (232)
Q Consensus 7 t~~G~i~i~L~~~~~p~~~~nf~~l~~~--~~-y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~ 83 (232)
|++|+|+|+||++.||+|++||++||+. +| |+++.||||+++||+|+||++..
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~------------------------ 77 (172)
T 2cmt_A 22 GDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKG------------------------ 77 (172)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTS------------------------
T ss_pred eecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCC------------------------
Confidence 8999999999999999999999999984 78 99999999999999999997510
Q ss_pred CCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCC
Q psy8249 84 SDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDL 163 (232)
Q Consensus 84 ~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~ 163 (232)
.+.++.++++..+++|.. .++|+++|+|+||+++|++++|||||++.++||||+
T Consensus 78 -------------------------~G~gg~si~g~~f~dE~~-~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg 131 (172)
T 2cmt_A 78 -------------------------DGTGGKSIYGRKFDDENF-QLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDG 131 (172)
T ss_dssp -------------------------SSSCCCBTTBSCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTT
T ss_pred -------------------------CCCCCCccCCCccccccc-CcccCCceEEEEeeCCCCCcccEEEEECCCCCccCC
Confidence 112234556667778865 788988999999999999999999999999999999
Q ss_pred CccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecC
Q psy8249 164 KYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLD 205 (232)
Q Consensus 164 ~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld 205 (232)
+|+|||+|++|||||++|++++++ +++|..+|+|.+|+.|+
T Consensus 132 ~~tvFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 132 KHVVFGRVVDGQNVVKKMESVGSK-SGKVKEPVIISRCGELI 172 (172)
T ss_dssp TSCEEEEEEECHHHHHHGGGGCCT-TCCCSSCEEEEEEEEEC
T ss_pred CeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCEEEEEeEeEC
Confidence 999999999999999999999885 78999999999999874
No 17
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-45 Score=291.90 Aligned_cols=151 Identities=42% Similarity=0.712 Sum_probs=135.0
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhh---------------hcCcccceeeeeecceeEEeeCCCcccccccee
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALC---------------ASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIE 65 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~---------------~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~ 65 (232)
+.|+|+|++|+|+|+||++.||+|++||++|| +.+||+++.||||+++|||||||++..|..
T Consensus 24 ~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~G~g--- 100 (191)
T 1w74_A 24 ATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRG--- 100 (191)
T ss_dssp EEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSSSSC---
T ss_pred eEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCCCCC---
Confidence 46999999999999999999999999999999 457899999999999999999987533321
Q ss_pred ccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCC
Q psy8249 66 LFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPN 145 (232)
Q Consensus 66 l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~ 145 (232)
+ ++..+++|....++|+++|+|+||+++|+
T Consensus 101 -----------------------------------------------g---~g~~f~dE~~~~l~h~~~G~lsMAn~gpn 130 (191)
T 1w74_A 101 -----------------------------------------------G---PGYKFADEFHPELQFDKPYLLAMANAGPG 130 (191)
T ss_dssp -----------------------------------------------C---SSCCBCCCCCTTCCSCSSSEEEECCSSTT
T ss_pred -----------------------------------------------C---CCCccccccccCCCcCCCcEEEEeeCCCC
Confidence 1 24567778767889999999999999999
Q ss_pred cccceEEeeccCCCCCCCCccEEEEEee--ccchhhhcccCCCCCCCCceeeEEEeeeeec
Q psy8249 146 TNASQFFITYAAHAHLDLKYTIFGKVID--GFETLDNLEKLPVNPNHKPIFFITYAAHAHL 204 (232)
Q Consensus 146 ~~~s~f~itl~~~~~ld~~~tvfG~Vve--G~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l 204 (232)
+++|||||++.++||||++|+|||+|++ |||||++|++++++.+++|..+|+|.+|+++
T Consensus 131 tngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 131 TNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp CBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCEEEEEEEC
T ss_pred CccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEC
Confidence 9999999999999999999999999999 9999999999999989999999999999864
No 18
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=7.7e-46 Score=288.70 Aligned_cols=147 Identities=44% Similarity=0.716 Sum_probs=130.4
Q ss_pred eCCeeEEEEeecCCCchhHHhHHHhhh-cCc--------ccceeeeeecceeEEeeCCCccccccceeccccCCCCcchh
Q psy8249 7 TDVGDIKIELFCEDCPKTCENFLALCA-SDY--------YNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCEN 77 (232)
Q Consensus 7 t~~G~i~i~L~~~~~p~~~~nf~~l~~-~~~--------y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~ 77 (232)
|++|+|+|+||++.||+||+||++||+ ++| |+++.||||+++||+|+||++.
T Consensus 15 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~------------------- 75 (170)
T 1qng_A 15 SNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITN------------------- 75 (170)
T ss_dssp SEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTT-------------------
T ss_pred EeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccC-------------------
Confidence 459999999999999999999999998 588 9999999999999999999751
Q ss_pred hhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccC
Q psy8249 78 FLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAA 157 (232)
Q Consensus 78 F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~ 157 (232)
.++.++.++++..+++|.. .++|+++|+|+||+++|++++|||||++.+
T Consensus 76 ------------------------------~~g~gg~si~g~~f~dE~~-~l~h~~~G~lsmAn~gp~tngSQFfIt~~~ 124 (170)
T 1qng_A 76 ------------------------------GNGSGGESIYGRSFTDENF-NMKHDQPGLLSMANAGPNTNSSQFFITLVP 124 (170)
T ss_dssp ------------------------------SSSSCCCBTTBSCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSC
T ss_pred ------------------------------CCCCCCccccCCccccccc-ccccCCCCEEEEeecCCCCcccEEEEECCC
Confidence 0112234566677778864 788988999999999999999999999999
Q ss_pred CCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeec
Q psy8249 158 HAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHL 204 (232)
Q Consensus 158 ~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l 204 (232)
+||||++|+|||+|++|||||++|+++++ .+++|..+|+|.+|+.|
T Consensus 125 ~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~~~v~I~~cG~l 170 (170)
T 1qng_A 125 CPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYVKRSVVITDCGEL 170 (170)
T ss_dssp CGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCCSSCEEEEEEEEC
T ss_pred CcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCCCCCeEEEeceeC
Confidence 99999999999999999999999999998 68999999999999976
No 19
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=1.3e-45 Score=286.26 Aligned_cols=153 Identities=40% Similarity=0.648 Sum_probs=136.7
Q ss_pred CEEEEE-eCCeeEEEEeecCCCchhHHhHHHhhh--cCc-ccceeeeeecceeEEeeCCCccccccceeccccCCCCcch
Q psy8249 1 MSVSLH-TDVGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCE 76 (232)
Q Consensus 1 ~~v~~~-t~~G~i~i~L~~~~~p~~~~nf~~l~~--~~~-y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~ 76 (232)
|+|.++ |++|+|+|+||++.||+|++||++||+ .+| |+++.|||++++||+|+||.+.
T Consensus 7 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~------------------ 68 (164)
T 3pmp_A 7 FNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTR------------------ 68 (164)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTT------------------
T ss_pred EEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCC------------------
Confidence 577885 999999999999999999999999999 888 9999999999999999999431
Q ss_pred hhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeecc
Q psy8249 77 NFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYA 156 (232)
Q Consensus 77 ~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~ 156 (232)
.++.++.++++..+++|. ..++|+++|+++||+.++++++|||||++.
T Consensus 69 -------------------------------~~g~gg~si~g~~~~dE~-~~l~h~~~G~lsma~~g~~t~~SQFfIt~~ 116 (164)
T 3pmp_A 69 -------------------------------HNGTGGKSIYGEKFADEN-FQVKHTKPGLLSMANAGANTNGSQFFITTV 116 (164)
T ss_dssp -------------------------------SSSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECBSSTTCBCSCEEEESS
T ss_pred -------------------------------CCCCCCcccCCccccccc-cccCcCCCcEEEEeeCCCCCcccEEEEECC
Confidence 011233456677788884 478998999999999999999999999999
Q ss_pred CCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeec
Q psy8249 157 AHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHL 204 (232)
Q Consensus 157 ~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l 204 (232)
++||||++|+|||+|++|||||++|++++++ +++|..+|+|.+|+.|
T Consensus 117 ~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~P~~~v~I~~cg~l 163 (164)
T 3pmp_A 117 PTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGKTNATIKITDCGTV 163 (164)
T ss_dssp CCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEEEEEEC
T ss_pred CChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcccCEEEEeCeEE
Confidence 9999999999999999999999999999887 7999999999999987
No 20
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.3e-45 Score=286.11 Aligned_cols=149 Identities=42% Similarity=0.683 Sum_probs=132.4
Q ss_pred EeCCeeEEEEeecCCCchhHHhHHHhhh--cCc-ccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhhhc
Q psy8249 6 HTDVGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALC 82 (232)
Q Consensus 6 ~t~~G~i~i~L~~~~~p~~~~nf~~l~~--~~~-y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~ 82 (232)
.|++|+|+|+||++.||+|++||++||+ .+| |+++.||||+++||+|+||++..
T Consensus 14 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~----------------------- 70 (165)
T 2z6w_A 14 GKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNH----------------------- 70 (165)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTS-----------------------
T ss_pred CEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCC-----------------------
Confidence 4689999999999999999999999999 999 99999999999999999997520
Q ss_pred cCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCC
Q psy8249 83 ASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLD 162 (232)
Q Consensus 83 ~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld 162 (232)
++.++.++++..+++|. ..++|.++|+|+||+.+|++++|||||++.++||||
T Consensus 71 --------------------------~g~gg~si~g~~f~dE~-~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ld 123 (165)
T 2z6w_A 71 --------------------------NGTGGKSIYGSRFPDEN-FTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLD 123 (165)
T ss_dssp --------------------------SSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGT
T ss_pred --------------------------CCCCCCcccCCcccCcc-cccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccC
Confidence 11223355666777774 478898899999999999999999999999999999
Q ss_pred CCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecC
Q psy8249 163 LKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLD 205 (232)
Q Consensus 163 ~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld 205 (232)
++|+|||+|++|||||++|++.++ .+++|..+|+|.+|+.|.
T Consensus 124 g~~~vFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 124 GKHVVFGHVIEGMDVVKKIESFGS-KSGRTSKKIVITDCGQLS 165 (165)
T ss_dssp TTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEEEEECC
T ss_pred CCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCcEEEEEeEEEC
Confidence 999999999999999999999985 589999999999999873
No 21
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=1.6e-45 Score=287.72 Aligned_cols=148 Identities=41% Similarity=0.658 Sum_probs=130.7
Q ss_pred eCCeeEEEEeecCCCchhHHhHHHhhhc--C--------cccceeeeeecceeEEeeCCCccccccceeccccCCCCcch
Q psy8249 7 TDVGDIKIELFCEDCPKTCENFLALCAS--D--------YYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCE 76 (232)
Q Consensus 7 t~~G~i~i~L~~~~~p~~~~nf~~l~~~--~--------~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~ 76 (232)
|++|+|+|+||++.||+|++||++||+. + ||+++.||||+++||+|+||++.
T Consensus 15 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~------------------ 76 (173)
T 2igv_A 15 KASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTR------------------ 76 (173)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTT------------------
T ss_pred EecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCC------------------
Confidence 4599999999999999999999999987 4 79999999999999999998651
Q ss_pred hhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeecc
Q psy8249 77 NFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYA 156 (232)
Q Consensus 77 ~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~ 156 (232)
.++.++.++++..+++|.. .++|+++|+|+||+++|++++|||||++.
T Consensus 77 -------------------------------~~G~gg~siyg~~f~dE~~-~l~h~~~G~lsmAn~gp~tngSQFfIt~~ 124 (173)
T 2igv_A 77 -------------------------------GNGTGGESIYGEKFPDENF-KEKHTGPGVLSMANAGPNTNGSQFFLCTV 124 (173)
T ss_dssp -------------------------------SSSSCCCBTTBSCBCCCCC-CSCCCSTTEEEECCSSTTCBSSCEEEESS
T ss_pred -------------------------------CCCCCCCccCCCcccCccc-ccCCCCCeEEEEeeCCCCCcceEEEEEcC
Confidence 1122334566777788865 78998899999999999999999999999
Q ss_pred CCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecC
Q psy8249 157 AHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLD 205 (232)
Q Consensus 157 ~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld 205 (232)
++||||++|+|||+|++|||||++|++++++ +++|..+|+|.+|+.|+
T Consensus 125 ~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~-~~~P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 125 KTEWLDGKHVVFGRVVEGLDVVKAVESNGSQ-SGKPVKDCMIADCGQLK 172 (173)
T ss_dssp CCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TSCCSSCEEEEEEEEEC
T ss_pred CccccCCCeeEEEEEecCHHHHHHHHhCCCC-CCCCCCCEEEEEeEEEc
Confidence 9999999999999999999999999999885 68999999999999986
No 22
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=2e-45 Score=286.92 Aligned_cols=149 Identities=41% Similarity=0.665 Sum_probs=131.8
Q ss_pred EeCCeeEEEEeecCCCchhHHhHHHhhh--cCc-ccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhhhc
Q psy8249 6 HTDVGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALC 82 (232)
Q Consensus 6 ~t~~G~i~i~L~~~~~p~~~~nf~~l~~--~~~-y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~ 82 (232)
+|++|+|+|+||++.||+|++||++||+ .+| |+++.||||+++||+|+||++..
T Consensus 22 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~----------------------- 78 (173)
T 2r99_A 22 NKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNH----------------------- 78 (173)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTS-----------------------
T ss_pred CccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCC-----------------------
Confidence 3899999999999999999999999995 677 99999999999999999997510
Q ss_pred cCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCC
Q psy8249 83 ASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLD 162 (232)
Q Consensus 83 ~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld 162 (232)
.+.++.++++..+++|.. .++|+.+|+|+||+++|++++|||||++.++||||
T Consensus 79 --------------------------~g~gg~si~g~~f~dE~~-~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LD 131 (173)
T 2r99_A 79 --------------------------NGTGGKSIYGKKFDDENF-ILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLD 131 (173)
T ss_dssp --------------------------SSSCCCBTTBSCBCCCCC-CSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGT
T ss_pred --------------------------CCCCCCccCCCcccCccc-CcccCCCcEEEEccCCCCCcccEEEEECCCCCccC
Confidence 112233556667777754 78898999999999999999999999999999999
Q ss_pred CCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecC
Q psy8249 163 LKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLD 205 (232)
Q Consensus 163 ~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld 205 (232)
++|+|||+|++|||||++|++.+++ +++|..+|+|.+|+.|.
T Consensus 132 g~~tVFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 132 GKHVVFGEVTEGLDVLRQIEAQGSK-DGKPKQKVIIADCGEYV 173 (173)
T ss_dssp TTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEEEEEECC
T ss_pred CCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCeEEEEeeeEC
Confidence 9999999999999999999999876 68999999999999874
No 23
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.2e-45 Score=291.48 Aligned_cols=156 Identities=40% Similarity=0.671 Sum_probs=137.2
Q ss_pred EEEE-EeCCeeEEEEeecCCCchhHHhHHHhhh--cCc-ccceeeeeecceeEEeeCCC-ccccccceeccccCCCCcch
Q psy8249 2 SVSL-HTDVGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDP-THTGDIKIELFCEDCPKTCE 76 (232)
Q Consensus 2 ~v~~-~t~~G~i~i~L~~~~~p~~~~nf~~l~~--~~~-y~~~~f~rvi~~f~iq~Gd~-t~~G~i~i~l~~~~~P~~~~ 76 (232)
.|.+ .|++|+|+|+||++.||+||+||++||+ .+| |+++.||||+++||+||||. +..|
T Consensus 21 di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g---------------- 84 (188)
T 3ich_A 21 DLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDG---------------- 84 (188)
T ss_dssp EEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSS----------------
T ss_pred EEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCC----------------
Confidence 3444 3899999999999999999999999995 789 99999999999999999994 2211
Q ss_pred hhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeecc
Q psy8249 77 NFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYA 156 (232)
Q Consensus 77 ~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~ 156 (232)
.++.++++..+++|. ..++|+++|+|+||++++++++|||||++.
T Consensus 85 ----------------------------------~gg~si~g~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~ 129 (188)
T 3ich_A 85 ----------------------------------TGGKSIYGERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTV 129 (188)
T ss_dssp ----------------------------------SCCCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESS
T ss_pred ----------------------------------CCCccccCCcccccc-cCcccCCCeEEEEccCCCCCcccEEEEECC
Confidence 223456677788884 478898999999999999999999999999
Q ss_pred CCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeec--CCCC
Q psy8249 157 AHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHL--DLKY 208 (232)
Q Consensus 157 ~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l--d~~~ 208 (232)
++||||++|+|||+|++|||||++|++++++.+++|..+|+|.+|+.| +++|
T Consensus 130 ~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~~~l~~~~Pf 183 (188)
T 3ich_A 130 KTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPF 183 (188)
T ss_dssp CCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEEEEEEE
T ss_pred CCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEEEEEeEEEecCCCC
Confidence 999999999999999999999999999999988999999999999988 4444
No 24
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=2e-45 Score=286.28 Aligned_cols=151 Identities=31% Similarity=0.498 Sum_probs=133.5
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
|+|+|+|++|+|+|+||++.||+||+||++||+.+||+++.||||+++||+|+||++..+.
T Consensus 4 ~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~------------------- 64 (167)
T 3s6m_A 4 SMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGLK------------------- 64 (167)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTTE-------------------
T ss_pred cEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCCC-------------------
Confidence 7899999999999999999999999999999999999999999999999999999763210
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecc-cCCCcccceEEeeccCCC
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMAN-NGPNTNASQFFITYAAHA 159 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~-~~~~~~~s~f~itl~~~~ 159 (232)
.+.++..+++|....++| .+|+|+||+ .+|++++|||||++.+++
T Consensus 65 ---------------------------------~~~~~~~~~~E~~~~l~~-~~G~lsmA~~~~p~t~gSQFfI~~~~~~ 110 (167)
T 3s6m_A 65 ---------------------------------QKPTDAPIANEANNGLKN-DTYTIAMARTNDPHSATAQFFINVNDNE 110 (167)
T ss_dssp ---------------------------------ECCCCCCBCCCGGGCCCC-CTTEEEECCCSSTTCBCSCEEEESSCCG
T ss_pred ---------------------------------CCCCCCccCCcccccccC-CccEEEEecCCCCCCccceEEEEcCCch
Confidence 001133456676656666 899999999 679999999999999999
Q ss_pred CCCCC--------ccEEEEEeeccchhhhcccCCCCC----CCCceeeEEEeeeeec
Q psy8249 160 HLDLK--------YTIFGKVIDGFETLDNLEKLPVNP----NHKPIFFITYAAHAHL 204 (232)
Q Consensus 160 ~ld~~--------~tvfG~VveG~dvl~~I~~~~~~~----~~~P~~~i~I~~~~~l 204 (232)
|||++ |+|||+|++|||+|++|+++++++ +++|..+|+|.+|.+|
T Consensus 111 ~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 111 FLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp GGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSCCEEEEEEEC
T ss_pred hcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCCeEEEEEEEC
Confidence 99998 999999999999999999999987 6899999999999765
No 25
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.3e-45 Score=296.44 Aligned_cols=158 Identities=42% Similarity=0.668 Sum_probs=141.0
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
..|.|+|++|+|+|+||++.||+||+||++||+.+||+++.||||+++|||||||++..|..
T Consensus 22 ~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~G------------------ 83 (232)
T 3bkp_A 22 GKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRG------------------ 83 (232)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSC------------------
T ss_pred CEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCC------------------
Confidence 36999999999999999999999999999999999999999999999999999998743321
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccC--CCCCcccccccccccccceEEecccCC--------------
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIW--GKKFEDEFKETLKHSERGIVSMANNGP-------------- 144 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~--~~~~~~e~~~~l~~~~~g~v~~~~~~~-------------- 144 (232)
+.+++ +..+++|..+.++|+.+|+|+||+.++
T Consensus 84 --------------------------------g~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~ 131 (232)
T 3bkp_A 84 --------------------------------GADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSL 131 (232)
T ss_dssp --------------------------------CCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC---------------
T ss_pred --------------------------------CCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccC
Confidence 22334 566778887788999999999999987
Q ss_pred CcccceEEeeccCCCCCCCCccEEEEEeeccch--hhhcccCCCCCCCCceeeEEEeeeeecCCCCc
Q psy8249 145 NTNASQFFITYAAHAHLDLKYTIFGKVIDGFET--LDNLEKLPVNPNHKPIFFITYAAHAHLDLKYT 209 (232)
Q Consensus 145 ~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dv--l~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~ 209 (232)
++++|||||+++++|+||++|+|||+|+ ||++ +++|++++++.+++|..+|+|.+|++++++|.
T Consensus 132 ~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dPf~ 197 (232)
T 3bkp_A 132 GTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFE 197 (232)
T ss_dssp -CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEECCCT
T ss_pred CCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCChh
Confidence 5999999999999999999999999999 7776 88999999999999999999999999999875
No 26
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.6e-45 Score=288.82 Aligned_cols=153 Identities=42% Similarity=0.672 Sum_probs=135.6
Q ss_pred eCCeeEEEEeecCCCchhHHhHHHhhhc--C-cccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhhhcc
Q psy8249 7 TDVGDIKIELFCEDCPKTCENFLALCAS--D-YYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCA 83 (232)
Q Consensus 7 t~~G~i~i~L~~~~~p~~~~nf~~l~~~--~-~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~ 83 (232)
|++|+|+|+||++.||+||+||++||+. + +|+++.|||++++||+||||++.
T Consensus 24 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~------------------------- 78 (185)
T 4fru_A 24 EDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTR------------------------- 78 (185)
T ss_dssp EEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTT-------------------------
T ss_pred EecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCC-------------------------
Confidence 5699999999999999999999999976 5 79999999999999999999751
Q ss_pred CCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCC
Q psy8249 84 SDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDL 163 (232)
Q Consensus 84 ~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~ 163 (232)
..+.++.++++..+++|.. .++|+++|+|+||+.++++++|||||+++++||||+
T Consensus 79 ------------------------~~g~gg~si~g~~f~de~~-~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~ 133 (185)
T 4fru_A 79 ------------------------GDGTGGKSIYGERFPDENF-KLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDG 133 (185)
T ss_dssp ------------------------SSSSCCCBTTBSCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTT
T ss_pred ------------------------CCCCCCccccCCccCcccc-ccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCC
Confidence 1122344566777888865 788989999999999999999999999999999999
Q ss_pred CccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeec--CCCCc
Q psy8249 164 KYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHL--DLKYT 209 (232)
Q Consensus 164 ~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~l--d~~~~ 209 (232)
+|+|||+|++|||||++|++++++.+++|..+|+|.+|+.| +++|+
T Consensus 134 ~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l~~~~Pf~ 181 (185)
T 4fru_A 134 KHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVTIADCGKIEVEKPFA 181 (185)
T ss_dssp TSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEEEEEEEE
T ss_pred CccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEEEEEceEEecCCCCc
Confidence 99999999999999999999999999999999999999977 34444
No 27
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2e-45 Score=285.13 Aligned_cols=151 Identities=30% Similarity=0.587 Sum_probs=133.1
Q ss_pred EEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhhh
Q psy8249 2 SVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLAL 81 (232)
Q Consensus 2 ~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l 81 (232)
.|+|+|++|+|+|+||++.||+||+||++||+.+||+++.||||+++||+|+||++. |.
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~-~~-------------------- 59 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEP-GM-------------------- 59 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEET-TT--------------------
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCccc-CC--------------------
Confidence 389999999999999999999999999999999999999999999999999999762 10
Q ss_pred ccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEeccc-CCCcccceEEeeccCCCC
Q psy8249 82 CASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANN-GPNTNASQFFITYAAHAH 160 (232)
Q Consensus 82 ~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~-~~~~~~s~f~itl~~~~~ 160 (232)
+.++++..+++|..+.++| .+|+|+||++ +|++++|||||++.+++|
T Consensus 60 -------------------------------g~~~~g~~~~dE~~~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~ 107 (164)
T 1lop_A 60 -------------------------------KQKATKEPIKNEANNGLKN-TRGTLAMARTQAPHSATAQFFINVVDNDF 107 (164)
T ss_dssp -------------------------------EECCCCCCBCCCCCSSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGG
T ss_pred -------------------------------CcCCCCCcccccccccccc-CccEEEEeecCCCCCccceEEEEcCCccc
Confidence 0012345677777666777 6999999974 799999999999999999
Q ss_pred CCCC--------ccEEEEEeeccchhhhcccCCCCC----CCCceeeEEEeeeeecC
Q psy8249 161 LDLK--------YTIFGKVIDGFETLDNLEKLPVNP----NHKPIFFITYAAHAHLD 205 (232)
Q Consensus 161 ld~~--------~tvfG~VveG~dvl~~I~~~~~~~----~~~P~~~i~I~~~~~ld 205 (232)
||++ |+|||+|++|||||++|+++++++ +++|..+|+|.+|..++
T Consensus 108 Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~v~~ 164 (164)
T 1lop_A 108 LNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE 164 (164)
T ss_dssp GSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEEEEEEECC
T ss_pred cCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEEEEEEEeC
Confidence 9998 999999999999999999999875 58999999999998864
No 28
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.3e-44 Score=284.74 Aligned_cols=146 Identities=45% Similarity=0.703 Sum_probs=128.1
Q ss_pred eCCeeEEEEeecCCCchhHHhHHHhhh--cCc--------ccceeeeeecceeEEeeCCCccccccceeccccCCCCcch
Q psy8249 7 TDVGDIKIELFCEDCPKTCENFLALCA--SDY--------YNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCE 76 (232)
Q Consensus 7 t~~G~i~i~L~~~~~p~~~~nf~~l~~--~~~--------y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~ 76 (232)
|++|+|+|+||++.||+||+||++||+ .+| |+++.||||+++||+|+||++.
T Consensus 31 t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~------------------ 92 (186)
T 2poy_A 31 TPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTR------------------ 92 (186)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTT------------------
T ss_pred EecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCC------------------
Confidence 559999999999999999999999996 577 9999999999999999999751
Q ss_pred hhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeecc
Q psy8249 77 NFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYA 156 (232)
Q Consensus 77 ~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~ 156 (232)
.++.++.++++..+++|.. .++|.++|+|+||+++|++++|||||++.
T Consensus 93 -------------------------------~~G~gg~si~g~~f~dE~~-~l~h~~~G~lsMAn~gpntngSQFFIt~~ 140 (186)
T 2poy_A 93 -------------------------------GDGTGGESIYGSKFRDENF-VYTHDAPFLLSMANAGPNTNGSQFFITTV 140 (186)
T ss_dssp -------------------------------SSSSCCCCTTC-CBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESS
T ss_pred -------------------------------CCCCCCCccCCCcccCccc-ccccCCCcEEEEeeCCCCCcccEEEEECC
Confidence 0122334566777788864 78898899999999999999999999999
Q ss_pred CCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 157 AHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 157 ~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
++|+||++|+|||+|++|||||++|+++++ .+++|..+|+|.+|+.
T Consensus 141 ~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t-~~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 141 PCPWLDGKHVVFGKVLEGMEVVKSIEKCGS-QNGKPTKSVCITASGV 186 (186)
T ss_dssp CCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEEEEC
T ss_pred CCcccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCCCCCEEEEeCCC
Confidence 999999999999999999999999999988 4789999999999984
No 29
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=3.2e-44 Score=282.56 Aligned_cols=153 Identities=46% Similarity=0.719 Sum_probs=133.9
Q ss_pred EEEEEeC-----CeeEEEEeecCCCchhHHhHHHhhhcCc---ccceeeeeecceeEEeeCCCccccccceeccccCCCC
Q psy8249 2 SVSLHTD-----VGDIKIELFCEDCPKTCENFLALCASDY---YNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPK 73 (232)
Q Consensus 2 ~v~~~t~-----~G~i~i~L~~~~~p~~~~nf~~l~~~~~---y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~ 73 (232)
.|.|+|+ +|+|+|+||++.||+||+||++||+.++ |+++.||||+++||+||||++..
T Consensus 24 ~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~-------------- 89 (184)
T 3rdd_A 24 TVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRH-------------- 89 (184)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTS--------------
T ss_pred EEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCC--------------
Confidence 3667766 9999999999999999999999998766 99999999999999999995410
Q ss_pred cchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEe
Q psy8249 74 TCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFI 153 (232)
Q Consensus 74 ~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~i 153 (232)
.+.++.++++..+++|.. .++|+.+|+|+||++++++++|||||
T Consensus 90 -----------------------------------~g~gg~si~g~~~~de~~-~l~h~~~G~lsmA~~gp~s~gSQFfI 133 (184)
T 3rdd_A 90 -----------------------------------NGTGGKSIYGEKFEDENF-ILKHTGPGILSMANAGPNTNGSQFFI 133 (184)
T ss_dssp -----------------------------------SSSCCCBTTBSCBCCCCC-CSCCCSTTEEEECCSSTTCBSSCEEE
T ss_pred -----------------------------------CCCCCcccCCCcccCccc-ccccCCCcEEEEEeCCCCCcccEEEE
Confidence 112233556667777755 68888999999999999999999999
Q ss_pred eccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecC
Q psy8249 154 TYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLD 205 (232)
Q Consensus 154 tl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld 205 (232)
+++++|+||++|+|||+|++|||||++|++++++ +++|..+|+|.+|++|+
T Consensus 134 t~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~g~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 134 CTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSR-NGKTSKKITIADCGQLE 184 (184)
T ss_dssp ESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TSCCSSCEEEEEEEECC
T ss_pred EeCCchhhCCCceEEEEEecCHHHHHHHHhcCCC-CCCCcCCeEEEeCeEEC
Confidence 9999999999999999999999999999999865 78999999999999985
No 30
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.2e-44 Score=281.28 Aligned_cols=152 Identities=31% Similarity=0.524 Sum_probs=132.2
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhhhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLA 80 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~ 80 (232)
..|.|+|++|+|+|+||++.||+||+||++||+.+||+++.||||+++||+||||++..+.-
T Consensus 5 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~------------------ 66 (166)
T 1v9t_A 5 PHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQ------------------ 66 (166)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCCB------------------
T ss_pred eEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCCC------------------
Confidence 36899999999999999999999999999999999999999999999999999997643210
Q ss_pred hccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEeccc-CCCcccceEEeeccCCC
Q psy8249 81 LCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANN-GPNTNASQFFITYAAHA 159 (232)
Q Consensus 81 l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~-~~~~~~s~f~itl~~~~ 159 (232)
..++..+++|..+.+.| .+|+|+||++ +|++++|||||++.+++
T Consensus 67 ----------------------------------~~~g~~~~dE~~~~l~~-~~G~lsmA~~~~p~t~gSQFfI~~~~~~ 111 (166)
T 1v9t_A 67 ----------------------------------KKPNPPIKNEADNGLRN-TRGTIAMARTADKDSATSQFFINVADNA 111 (166)
T ss_dssp ----------------------------------CCCCCCBCCCGGGSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCG
T ss_pred ----------------------------------CCCCCcccccccccccC-CceEEEEeecCCCCCccceEEEEeCCcc
Confidence 00123456676655554 7999999996 69999999999999999
Q ss_pred CCCCC-----ccEEEEEeeccchhhhcccCCCCC----CCCceeeEEEeeeeecC
Q psy8249 160 HLDLK-----YTIFGKVIDGFETLDNLEKLPVNP----NHKPIFFITYAAHAHLD 205 (232)
Q Consensus 160 ~ld~~-----~tvfG~VveG~dvl~~I~~~~~~~----~~~P~~~i~I~~~~~ld 205 (232)
|||++ |+|||+|++|||||++|+++++++ +++|..+|+|.+|.+++
T Consensus 112 ~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 112 FLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSATVLP 166 (166)
T ss_dssp GGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCBEEEEEECC
T ss_pred ccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCeEEEEEEEeC
Confidence 99998 999999999999999999999886 47899999999998763
No 31
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=3.8e-45 Score=285.15 Aligned_cols=147 Identities=43% Similarity=0.678 Sum_probs=112.1
Q ss_pred eCCeeEEEEeecCCCchhHHhHHHhhh--cCc-ccceeeeeecceeEEeeCC-CccccccceeccccCCCCcchhhhhhc
Q psy8249 7 TDVGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGD-PTHTGDIKIELFCEDCPKTCENFLALC 82 (232)
Q Consensus 7 t~~G~i~i~L~~~~~p~~~~nf~~l~~--~~~-y~~~~f~rvi~~f~iq~Gd-~t~~G~i~i~l~~~~~P~~~~~F~~l~ 82 (232)
|++|+|+|+||++.||+|++||++||+ .++ |+++.||||+++||+|+|| ++..|
T Consensus 19 T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g---------------------- 76 (172)
T 2c3b_A 19 TKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNG---------------------- 76 (172)
T ss_dssp CEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC----------------------------
T ss_pred cccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCC----------------------
Confidence 888999999999999999999999999 778 9999999999999999999 43222
Q ss_pred cCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCC
Q psy8249 83 ASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLD 162 (232)
Q Consensus 83 ~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld 162 (232)
.++.++++..+++|. ..++|+++|+|+||+++|++++|||||++.++||||
T Consensus 77 ----------------------------~gg~si~g~~f~dE~-~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LD 127 (172)
T 2c3b_A 77 ----------------------------TGGRSIYGDKFADEN-FSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLD 127 (172)
T ss_dssp ---------------------------------------------CHHHHHTCEEEEC---------CEEEECSCCTTCC
T ss_pred ----------------------------CCCcccCCCcccCcc-cccccCCCeEEEEeeCCCCCcccEEEEECCCCCccC
Confidence 122345566777784 477888999999999999999999999999999999
Q ss_pred CCccEEEEEee--ccchhhhcccCCCCCCC-CceeeEEEeeeeec
Q psy8249 163 LKYTIFGKVID--GFETLDNLEKLPVNPNH-KPIFFITYAAHAHL 204 (232)
Q Consensus 163 ~~~tvfG~Vve--G~dvl~~I~~~~~~~~~-~P~~~i~I~~~~~l 204 (232)
++|+|||+|++ |||||++|+++++++.+ +|..+|+|.+|+.|
T Consensus 128 g~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 128 GKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp SCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEEEEEC
T ss_pred CCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCeEEEeCeeC
Confidence 99999999999 99999999999998765 99999999999976
No 32
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=4.5e-44 Score=283.54 Aligned_cols=154 Identities=41% Similarity=0.651 Sum_probs=134.4
Q ss_pred EEEE-EeCCeeEEEEeecCCCchhHHhHHHhhh--cCc-ccceeeeeecceeEEeeCCCccccccceeccccCCCCcchh
Q psy8249 2 SVSL-HTDVGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCEN 77 (232)
Q Consensus 2 ~v~~-~t~~G~i~i~L~~~~~p~~~~nf~~l~~--~~~-y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~ 77 (232)
.+.+ +|++|+|+|+||++.||+||+||++||+ .++ |+++.||||+++||+|+||.+.
T Consensus 33 di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~------------------- 93 (193)
T 3k2c_A 33 DVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTA------------------- 93 (193)
T ss_dssp EEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTT-------------------
T ss_pred EEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCC-------------------
Confidence 3444 3899999999999999999999999999 667 9999999999999999999531
Q ss_pred hhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccC
Q psy8249 78 FLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAA 157 (232)
Q Consensus 78 F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~ 157 (232)
..+.++.++++..+++|.. .++|+++|+++||+.++++++|||||++++
T Consensus 94 ------------------------------~~g~gg~si~g~~f~dE~~-~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~ 142 (193)
T 3k2c_A 94 ------------------------------HNGTGGRSIYGEKFPDENF-ELKHTKEGILSMANCGAHTNGSQFFITLGK 142 (193)
T ss_dssp ------------------------------SSSSCCCCTTSSCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSC
T ss_pred ------------------------------CCCcCCcccCCCccccccc-ccccCCCcEEEEEeCCCCCCccEEEEECCC
Confidence 1112334566777778744 788989999999999999999999999999
Q ss_pred CCCCCCCccEEEEEeeccchhhhcccCCCCCCCCce--eeEEEeeeeecCC
Q psy8249 158 HAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPI--FFITYAAHAHLDL 206 (232)
Q Consensus 158 ~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~--~~i~I~~~~~ld~ 206 (232)
+|+||++|+|||+|++|||||++|++++++ +++|. .+|+|.+|+.|+.
T Consensus 143 ~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~P~~~~~v~I~~cG~l~~ 192 (193)
T 3k2c_A 143 TQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQVKKGYRIEIRDCGVLGS 192 (193)
T ss_dssp CGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCCTTCCEEEEEEEECC-
T ss_pred CcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCcCccCccEEEEEceEeCC
Confidence 999999999999999999999999999988 67999 9999999999873
No 33
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=6.1e-44 Score=288.30 Aligned_cols=148 Identities=44% Similarity=0.717 Sum_probs=132.2
Q ss_pred eCCeeEEEEeecCCCchhHHhHHHhhhcC--------cccceeeeeecceeEEeeCCCccccccceeccccCCCCcchhh
Q psy8249 7 TDVGDIKIELFCEDCPKTCENFLALCASD--------YYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENF 78 (232)
Q Consensus 7 t~~G~i~i~L~~~~~p~~~~nf~~l~~~~--------~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F 78 (232)
|++|+|+|+||++.||+||+||++||+.+ +|+++.||||+++||||+||++.
T Consensus 71 t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~-------------------- 130 (229)
T 1z81_A 71 NFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFIN-------------------- 130 (229)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTT--------------------
T ss_pred eecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcC--------------------
Confidence 45999999999999999999999999988 69999999999999999999751
Q ss_pred hhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCC
Q psy8249 79 LALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAH 158 (232)
Q Consensus 79 ~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~ 158 (232)
.++.++.++++..+++|.. .++|+++|+|+||+.+|++++|||||++.++
T Consensus 131 -----------------------------g~G~Gg~siyg~~f~dE~~-~l~h~~~G~LsMAn~gpntngSQFFIt~~~~ 180 (229)
T 1z81_A 131 -----------------------------HNGSGSLSIYGEKFDDENF-DIKHDKEGLLSMANSGPNTNGCQFFITTKKC 180 (229)
T ss_dssp -----------------------------SSSCCCCBTTBSCCCCCCC-CSCCCSTTEEEECCSSSSCCCSCEEEESSCC
T ss_pred -----------------------------CCCCCCCccCCCccccccc-ccccCCCcEEEeccCCCCCcccEEEEECCCC
Confidence 0122334566777788864 7889899999999999999999999999999
Q ss_pred CCCCCCccEEEEEe--eccchhhhcccCCCCCC-CCceeeEEEeeeeec
Q psy8249 159 AHLDLKYTIFGKVI--DGFETLDNLEKLPVNPN-HKPIFFITYAAHAHL 204 (232)
Q Consensus 159 ~~ld~~~tvfG~Vv--eG~dvl~~I~~~~~~~~-~~P~~~i~I~~~~~l 204 (232)
|+||++|+|||+|+ +|||||++|++++++++ ++|..+|+|.+|+.|
T Consensus 181 ~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 181 EWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp GGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCBSSCEEEEEEEEC
T ss_pred cccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCCCCCeEEEeCeeC
Confidence 99999999999999 99999999999999987 999999999999976
No 34
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=5.2e-44 Score=290.68 Aligned_cols=155 Identities=23% Similarity=0.423 Sum_probs=129.6
Q ss_pred CEEEEE-eCCeeEEEEeecCCCchhHHhHHHhhhc-----------------C--c-ccceeeeeecceeEEeeCCC-cc
Q psy8249 1 MSVSLH-TDVGDIKIELFCEDCPKTCENFLALCAS-----------------D--Y-YNGCIFHRNIKGFIVQTGDP-TH 58 (232)
Q Consensus 1 ~~v~~~-t~~G~i~i~L~~~~~p~~~~nf~~l~~~-----------------~--~-y~~~~f~rvi~~f~iq~Gd~-t~ 58 (232)
|+|.|+ |++|+|+|+||++.||+||+||++||+. + | |+++.||||+++|||||||. +.
T Consensus 19 ~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~~~g 98 (234)
T 2ose_A 19 MDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIYNS 98 (234)
T ss_dssp EEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCCC--
T ss_pred EEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCccCC
Confidence 455665 9999999999999999999999999984 3 6 88888888888888888883 32
Q ss_pred ccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCC-----Ccccccccccccc
Q psy8249 59 TGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKK-----FEDEFKETLKHSE 133 (232)
Q Consensus 59 ~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~-----~~~e~~~~l~~~~ 133 (232)
.| .++.++++.. ++ + ..++|++
T Consensus 99 ~G--------------------------------------------------~Gg~siyg~~~~p~~f~-~--~~l~h~~ 125 (234)
T 2ose_A 99 NG--------------------------------------------------SSAGTVYCDEPIPPVFG-D--YFYPHES 125 (234)
T ss_dssp ----------------------------------------------------CCCCCTTTTCCBCCCCC-S--CCCCSCS
T ss_pred CC--------------------------------------------------CCCccccCCccCccccc-C--cCccCCC
Confidence 22 2223334433 33 2 2578888
Q ss_pred cceEEecc----cCCCcccceEEeeccC------CCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 134 RGIVSMAN----NGPNTNASQFFITYAA------HAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 134 ~g~v~~~~----~~~~~~~s~f~itl~~------~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
+|+||||+ +++++++|||||++.+ +||||++|+|||+|++|||||++|++++++.+++|..+|+|.+|+.
T Consensus 126 ~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~ 205 (234)
T 2ose_A 126 KGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGA 205 (234)
T ss_dssp TTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEE
T ss_pred CCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEE
Confidence 99999999 8999999999999999 9999999999999999999999999999998899999999999999
Q ss_pred cCCCC
Q psy8249 204 LDLKY 208 (232)
Q Consensus 204 ld~~~ 208 (232)
++.++
T Consensus 206 l~~p~ 210 (234)
T 2ose_A 206 YLDSS 210 (234)
T ss_dssp CCCHH
T ss_pred ecCCc
Confidence 98754
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=4.9e-40 Score=286.66 Aligned_cols=154 Identities=47% Similarity=0.740 Sum_probs=136.7
Q ss_pred EEEEeC-----CeeEEEEeecCCCchhHHhHHHhhhc--------C---cccceeeeeecceeEEeeCCCccccccceec
Q psy8249 3 VSLHTD-----VGDIKIELFCEDCPKTCENFLALCAS--------D---YYNGCIFHRNIKGFIVQTGDPTHTGDIKIEL 66 (232)
Q Consensus 3 v~~~t~-----~G~i~i~L~~~~~p~~~~nf~~l~~~--------~---~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l 66 (232)
|.|+|+ .|+|+|+||++.||+||+||++||+. | +|+|+.|||||++|||||||++.
T Consensus 18 v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~-------- 89 (370)
T 1ihg_A 18 VFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSN-------- 89 (370)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTT--------
T ss_pred EEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCC--------
Confidence 667776 89999999999999999999999998 5 68999999999999999988751
Q ss_pred cccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccceEEecccCCCc
Q psy8249 67 FCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNT 146 (232)
Q Consensus 67 ~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~ 146 (232)
+++.++.++++..+++|.. .++|+.+|+|+|++.+|++
T Consensus 90 -----------------------------------------~~g~g~~~~~~~~~~~e~~-~~~~~~~g~l~ma~~~~~~ 127 (370)
T 1ihg_A 90 -----------------------------------------QNGTGGESIYGEKFEDENF-HYKHDKEGLLSMANAGSNT 127 (370)
T ss_dssp -----------------------------------------SSSSCCCBTTBSCBCCCCC-CBCCCSTTEEEECCSSTTC
T ss_pred -----------------------------------------CCCCCCCCCCCCCcCCCcC-CcCCCCCeEEEEeeCCCCC
Confidence 1223445677888888865 7889999999999999999
Q ss_pred ccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCC
Q psy8249 147 NASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLK 207 (232)
Q Consensus 147 ~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~ 207 (232)
++|||||+++++||||++|+|||+|++||+++++|++.+++. ++|..+|+|.+|+.+...
T Consensus 128 ~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~~~v~I~~~g~l~~~ 187 (370)
T 1ihg_A 128 NGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKPAKLCVIAECGELKEG 187 (370)
T ss_dssp BCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEESSCEEEEEEEEECTT
T ss_pred CCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-CccceeEEEEEEEEeccC
Confidence 999999999999999999999999999999999999999886 899999999999998764
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-35 Score=253.52 Aligned_cols=151 Identities=27% Similarity=0.422 Sum_probs=118.1
Q ss_pred EEEEeC--------CeeEEEEeecCCCchhHHhHHHhhhcCcccceeeeeecceeEEeeCCCccccccceeccccCCCCc
Q psy8249 3 VSLHTD--------VGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKT 74 (232)
Q Consensus 3 v~~~t~--------~G~i~i~L~~~~~p~~~~nf~~l~~~~~y~~~~f~rvi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~ 74 (232)
|.|+|+ .|+|+|+||++.||+||+||++||+.+||+++.|||| ++||+||||++..|..-.. |.+
T Consensus 173 V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~~------~~~ 245 (369)
T 3rfy_A 173 VDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFID------PST 245 (369)
T ss_dssp EEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCCS------CCC
T ss_pred EEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCccC------ccc
Confidence 566665 9999999999999999999999999999999999999 9999999999866543111 110
Q ss_pred chhhhhhccCCCCCCceeEEeecC-cEEEcCCCCCCCCCCCccCCCCCcccc----cccccccccceEEeccc--CCCcc
Q psy8249 75 CENFLALCASDYYNGCIFHRNIKG-FIVQTGDPTHTGKGGNSIWGKKFEDEF----KETLKHSERGIVSMANN--GPNTN 147 (232)
Q Consensus 75 ~~~F~~l~~~~~y~g~~~~rv~~~-~~vq~G~~~~~~~~~~~~~~~~~~~e~----~~~l~~~~~g~v~~~~~--~~~~~ 147 (232)
.. . +.+|. +.+ ...+.++|+..+++|. .+.++|+.+|+++||++ +++++
T Consensus 246 g~---------~-------~~iP~E~~~--------~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSn 301 (369)
T 3rfy_A 246 EK---------T-------RTVPLEIMV--------TGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSG 301 (369)
T ss_dssp CC---------C-------CSSSSSSCS--------SSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCS
T ss_pred Cc---------C-------cccCccccc--------cCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCc
Confidence 00 0 00000 000 0012356677777663 45788999999999997 89999
Q ss_pred cceEEeec-------cCCCCCCCCccEEEEEeeccchhhhcccC
Q psy8249 148 ASQFFITY-------AAHAHLDLKYTIFGKVIDGFETLDNLEKL 184 (232)
Q Consensus 148 ~s~f~itl-------~~~~~ld~~~tvfG~VveG~dvl~~I~~~ 184 (232)
+|||||++ .+.+|||++|+|||+|++|||||++|++.
T Consensus 302 gSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 302 SSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKVG 345 (369)
T ss_dssp SCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCCTT
T ss_pred cceEEEEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHhCC
Confidence 99999999 46899999999999999999999999884
No 37
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=99.88 E-value=1.4e-23 Score=167.29 Aligned_cols=139 Identities=32% Similarity=0.580 Sum_probs=98.5
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcC-----CCCCCCCCCCccCCCCCcccccccccc
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTG-----DPTHTGKGGNSIWGKKFEDEFKETLKH 131 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G-----~~~~~~~~~~~~~~~~~~~e~~~~l~~ 131 (232)
|+.|+++++||++.+|++++||++||+.++|+++.|||++++||+||| |+..++.++.+++......
T Consensus 13 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~~~-------- 84 (201)
T 3bo7_A 13 TTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISGFP-------- 84 (201)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCSST--------
T ss_pred eCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCcccccccccc--------
Confidence 789999999999999999999999999999999999999999999999 8887777777665432100
Q ss_pred cccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCccc
Q psy8249 132 SERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIF 211 (232)
Q Consensus 132 ~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~f 211 (232)
.|.- + ++ ++ .+.| .|..-|.| +|++... ..+...++|+..++++||+.|+||
T Consensus 85 --~g~~-f----~d----E~------~~~l--~h~~~G~l--------smA~~gp-~s~gSQFFIt~~~~~~LDg~~tVF 136 (201)
T 3bo7_A 85 --GGAP-F----ED----EF------DNRL--VHQGIGVL--------SMANDGK-HSNLSEFFITFKSCEHLNNKHTIF 136 (201)
T ss_dssp --TCCC-B----CC----CC------CTTC--CCCSTTEE--------EECCSST-TCBSSCEEEESSCCGGGTTTSCEE
T ss_pred --CCCc-c----cC----cc------cCCC--CcCCCcEE--------EEeeCCC-CCcccEEEEECCCCcccCCCceEE
Confidence 0000 0 00 00 0111 12222333 2333332 245667899999999999999999
Q ss_pred ceeecchhhhhhhccCcCCC
Q psy8249 212 GKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 212 g~V~~g~~v~~~i~~~~~~~ 231 (232)
|+|++|||||++|++++++.
T Consensus 137 G~Vv~Gmdvv~~I~~~~t~~ 156 (201)
T 3bo7_A 137 GRVVGGLDVLRQWEKLETDK 156 (201)
T ss_dssp EEEEECHHHHHHHTTCCBCT
T ss_pred EEEecCHHHHHHHHhCCcCC
Confidence 99999999999999999875
No 38
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=99.88 E-value=1.4e-23 Score=161.82 Aligned_cols=132 Identities=61% Similarity=1.035 Sum_probs=95.5
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++|+++.+|++++||++||++++|+++.|||+++++++|||++.. .+. +. + ... |
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~---~g~---gg----~---si~----g- 68 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTG---TGR---GG----N---SIW----G- 68 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTS---SSS---CC----C---CTT----S-
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCC---CCC---CC----C---ccc----C-
Confidence 7899999999999999999999999999999999999999999999998651 110 10 0 000 0
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccceeec
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFGKVID 216 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg~V~~ 216 (232)
. .+.+...-.-+|..-|.| ++++... ..+...++|+..++++||+.|++||+|++
T Consensus 69 ------------~----~~~dE~~~~l~h~~~G~l--------sma~~gp-~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~ 123 (161)
T 2ok3_A 69 ------------K----KFEDEYSEYLKHNVRGVV--------SMANNGP-NTNGSQFFITYGKQPHLDMKYTVFGKVID 123 (161)
T ss_dssp ------------S----CBCCCCCTTCCSCSTTEE--------EECCSST-TCBCSCEEEESSCCGGGTTTSCEEEEEEE
T ss_pred ------------C----ccccccCcCcCcCCCeEE--------EEecCCC-CCcceEEEEEcCCCCccCCCEeEEEEEeC
Confidence 0 000000000112122333 3333332 24556789999999999999999999999
Q ss_pred chhhhhhhccCcCCC
Q psy8249 217 GLETLDNLEKLPVNP 231 (232)
Q Consensus 217 g~~v~~~i~~~~~~~ 231 (232)
|||||++|++++++.
T Consensus 124 G~dvv~~I~~~~~~~ 138 (161)
T 2ok3_A 124 GLETLDELEKLPVNE 138 (161)
T ss_dssp CHHHHHHHHTCCBCT
T ss_pred CHHHHHHHHhCCccC
Confidence 999999999999875
No 39
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=99.88 E-value=1.5e-23 Score=161.32 Aligned_cols=132 Identities=39% Similarity=0.677 Sum_probs=94.6
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++||++.+|++++||++||+.++|+++.|||++++||+|||++. +... +.. ......+
T Consensus 12 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~-----~~g~-gg~--si~g~~~------- 76 (160)
T 2fu0_A 12 TTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPS-----GDGT-GGE--SIWGNEF------- 76 (160)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTT-----SSSS-CCC--CTTSSCB-------
T ss_pred ecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcC-----CCCC-CCC--cccCCCc-------
Confidence 789999999999999999999999999999999999999999999999863 1100 100 0000000
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccceeec
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFGKVID 216 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg~V~~ 216 (232)
++ +++ +.| +|..-|.| ++++...+ .+...++|+..++++||+.|++||+|++
T Consensus 77 -------~d----E~~------~~l--~h~~~G~l--------smA~~gp~-s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~ 128 (160)
T 2fu0_A 77 -------ED----EFF------DHL--NHSKPFMV--------SMANCGPN-TNGSQFFITTVPCPWLDFKHTVFGKVTQ 128 (160)
T ss_dssp -------CC----CCB------TTB--CSSSSSEE--------EECCSSTT-CBCSCEEEESSCCGGGTTTSCEEEEEEE
T ss_pred -------cc----ccc------CCc--ccCCceEE--------EEecCCCC-CcccEEEEECCCCCccCCCcEEEEEEEc
Confidence 00 110 001 11111333 23333322 4556789999999999999999999999
Q ss_pred chhhhhhhccCcCCC
Q psy8249 217 GLETLDNLEKLPVNP 231 (232)
Q Consensus 217 g~~v~~~i~~~~~~~ 231 (232)
|||||++|+++++++
T Consensus 129 G~dvv~~I~~~~t~~ 143 (160)
T 2fu0_A 129 GSKIVLDIEKVRTDK 143 (160)
T ss_dssp CHHHHHHHHTSCBCT
T ss_pred CHHHHHHHHhCCcCC
Confidence 999999999999874
No 40
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=99.88 E-value=1.7e-23 Score=161.88 Aligned_cols=132 Identities=37% Similarity=0.616 Sum_probs=95.5
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++|+++.+|++++||++||+.++|+++.|||++++|++|||++.. .+. -+..+..+ .
T Consensus 18 t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~---~g~--gg~si~g~---~-------- 81 (166)
T 2x7k_A 18 TSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTG---TGR--GGASIYGK---Q-------- 81 (166)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTS---SSS--CCCCTTSS---C--------
T ss_pred eCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCC---CCC--CCCccCCC---c--------
Confidence 6789999999999999999999999999999999999999999999998751 110 00000000 0
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccceeec
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFGKVID 216 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg~V~~ 216 (232)
+.+..+..-+|..-|.| ++++... ..+...++|+..++++||+.|++||+|++
T Consensus 82 ------------------~~dE~~~~l~h~~~G~l--------smAn~gp-~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~ 134 (166)
T 2x7k_A 82 ------------------FEDELHPDLKFTGAGIL--------AMANAGP-DTNGSQFFVTLAPTQWLDGKHTIFGRVCQ 134 (166)
T ss_dssp ------------------BCCCCCTTSCCCSTTEE--------EECBSST-TCBCSCEEEESSCCGGGTTTSCEEEEEEE
T ss_pred ------------------cccccccccCCCCCeEE--------EEeeCCC-CCccceEEEECCCCCccCCCeeEEEEEEc
Confidence 00100001112212333 2333332 34566789999999999999999999999
Q ss_pred chhhhhhhccCcCCC
Q psy8249 217 GLETLDNLEKLPVNP 231 (232)
Q Consensus 217 g~~v~~~i~~~~~~~ 231 (232)
|||||++|+++++++
T Consensus 135 G~dvv~~I~~~~t~~ 149 (166)
T 2x7k_A 135 GIGMVNRVGMVETNS 149 (166)
T ss_dssp CHHHHHHHTTSCBCT
T ss_pred CHHHHHHHHcCCcCC
Confidence 999999999999875
No 41
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=99.88 E-value=1.8e-23 Score=164.31 Aligned_cols=133 Identities=47% Similarity=0.851 Sum_probs=95.5
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++||++.+|++++||++||+.++|+++.|||++++||+|||++.. .+. +.. ... |.
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~---~g~---gg~-------si~----g~ 85 (185)
T 2poe_A 23 TNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTG---TGK---GGE-------SIY----GR 85 (185)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTS---SSS---CCC-------BTT----BS
T ss_pred ecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCC---CCC---CCC-------ccC----CC
Confidence 7899999999999999999999999999999999999999999999998641 110 100 000 00
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCC---CCCCCceeeEEEeeeeecCCCCcccce
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPV---NPNHKPIFFITYAAHAHLDLKYTIFGK 213 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~---~~~~~P~~~i~I~~~~~ld~~~~~fg~ 213 (232)
.+.+.....-+|..-|.| ++++... ...+...++|+..++++||+.|++||+
T Consensus 86 -----------------~~~dE~~~~l~h~~~G~l--------smA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~ 140 (185)
T 2poe_A 86 -----------------YFDDEIYPELKYDRRGIL--------SMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGK 140 (185)
T ss_dssp -----------------CBCCCCCTTSCCCSTTEE--------EECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEE
T ss_pred -----------------cccccccCCCccCCCeEE--------EEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEE
Confidence 000000001112222333 2333321 224556789999999999999999999
Q ss_pred eecchhhhhhhccCcCCC
Q psy8249 214 VIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 214 V~~g~~v~~~i~~~~~~~ 231 (232)
|++|||||++|++++++.
T Consensus 141 Vv~Gmdvv~~I~~~~t~~ 158 (185)
T 2poe_A 141 LIDGFETLNTLENCPSDK 158 (185)
T ss_dssp EEECHHHHHHHHHSCBCT
T ss_pred EeCCHHHHHHHHhCCcCC
Confidence 999999999999999875
No 42
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=99.87 E-value=1.1e-22 Score=157.43 Aligned_cols=142 Identities=32% Similarity=0.499 Sum_probs=99.2
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhcc--CCC-CCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFED 123 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~--~~~-y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~ 123 (232)
+.||....+.|+.|+++++||++.+|++++||++||+ .++ |+++.|||+++++++|+|+ . .... +
T Consensus 4 ~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd--~--~~~~---g----- 71 (164)
T 3pmp_A 4 NVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGD--F--TRHN---G----- 71 (164)
T ss_dssp CEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECC--T--TTSS---S-----
T ss_pred EEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCC--C--CCCC---C-----
Confidence 4577777777999999999999999999999999999 567 9999999999999999985 0 0000 0
Q ss_pred cccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 124 EFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 124 e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
.|-.+. .+..| .+. ....+|..-|.| ++++...+ .+...++|+..++++
T Consensus 72 ----------~gg~si-------~g~~~----~dE-~~~l~h~~~G~l--------sma~~g~~-t~~SQFfIt~~~~~~ 120 (164)
T 3pmp_A 72 ----------TGGKSI-------YGEKF----ADE-NFQVKHTKPGLL--------SMANAGAN-TNGSQFFITTVPTSW 120 (164)
T ss_dssp ----------SCCCBT-------TBSCB----CCC-CCCSCCCSTTEE--------EECBSSTT-CBCSCEEEESSCCGG
T ss_pred ----------CCCccc-------CCccc----ccc-ccccCcCCCcEE--------EEeeCCCC-CcccEEEEECCCChh
Confidence 000000 00000 000 011112212333 23333322 445678999999999
Q ss_pred cCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 204 LDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 204 ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
||+.|++||+|++||||||+|++++++.
T Consensus 121 Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~ 148 (164)
T 3pmp_A 121 LDGKHVVFGEVIEGLDIVRKVEGKGSAS 148 (164)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTTCCTT
T ss_pred hCCCccEEEEEeCCHHHHHHHHhCCCCC
Confidence 9999999999999999999999998863
No 43
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=99.87 E-value=1e-22 Score=159.46 Aligned_cols=142 Identities=33% Similarity=0.577 Sum_probs=99.2
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhcc-----------CCCCCCceeEEeecCcEEEcCCCCCCCCCCCc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCA-----------SDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNS 115 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~-----------~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~ 115 (232)
+.|+....+.++.|+++++||++.+|++++||++||+ .++|+++.|||++++||+|+|+ . ..+.
T Consensus 11 ~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd---~-~~~~- 85 (179)
T 2wfi_A 11 RCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGD---F-SEGN- 85 (179)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECC---T-TTSS-
T ss_pred eEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEccc---c-cCCC-
Confidence 4577777778999999999999999999999999996 4589999999999999999985 1 0000
Q ss_pred cCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceee
Q psy8249 116 IWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFF 195 (232)
Q Consensus 116 ~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~ 195 (232)
+ .|--+. .+.. +.+. ....+|..-|.| ++++...+ .+...++
T Consensus 86 --g---------------~gg~si-------~g~~----f~dE-~~~~~h~~~G~l--------sMAn~gp~-tngSQFf 127 (179)
T 2wfi_A 86 --G---------------RGGESI-------YGGF----FEDE-SFAVKHNKEFLL--------SMANRGKD-TNGSQFF 127 (179)
T ss_dssp --S---------------SCCCCT-------TSSC----BCCC-CCCSCCCSTTEE--------EECCSSTT-CBCSCEE
T ss_pred --C---------------CCCCcc-------cCCc----cccc-ccCcCcCCCeEE--------EEEeCCCC-CcceEEE
Confidence 0 000000 0000 0000 001112111222 33343333 4556789
Q ss_pred EEEeeeeecCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 196 ITYAAHAHLDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 196 i~I~~~~~ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
|+..++++||+.|+|||+|++|||||++|+++++++
T Consensus 128 It~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~ 163 (179)
T 2wfi_A 128 ITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDA 163 (179)
T ss_dssp EESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCT
T ss_pred EEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999875
No 44
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.87 E-value=3.5e-23 Score=163.72 Aligned_cols=132 Identities=39% Similarity=0.765 Sum_probs=95.6
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+|+++||++.+|++++||++||+.++|+++.|||++++||+|||++.. .+. +.. ... |
T Consensus 26 T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~---~g~---Gg~-------si~----g- 87 (197)
T 1zkc_A 26 TNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTG---TGT---GGE-------SYW----G- 87 (197)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTS---SSS---CCC-------BTT----B-
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCC---CCC---CCC-------ccC----C-
Confidence 7899999999999999999999999999999999999999999999998641 110 100 000 0
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccceeec
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFGKVID 216 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg~V~~ 216 (232)
.. +.+.....-.|..-|.| +|++... ..+...++|+..++++||+.|++||+|++
T Consensus 88 ------------~~----f~dE~~~~l~h~~~G~l--------sMAn~gp-~sngSQFFIt~~~~~~LDg~~tVFG~Vv~ 142 (197)
T 1zkc_A 88 ------------KP----FKDEFRPNLSHTGRGIL--------SMANSGP-NSNRSQFFITFRSCAYLDKKHTIFGRVVG 142 (197)
T ss_dssp ------------SC----BCCCCCTTCCSCSTTEE--------EECCSST-TCBCSCEEEESSCCGGGTTTSCEEEEEEE
T ss_pred ------------Cc----cccccCcCcCCCCceEE--------EEecCCC-CCcccEEEEEcCCCCccCCCccEEEEEEc
Confidence 00 00000001112222333 2333332 24566799999999999999999999999
Q ss_pred chhhhhhhccCcCCC
Q psy8249 217 GLETLDNLEKLPVNP 231 (232)
Q Consensus 217 g~~v~~~i~~~~~~~ 231 (232)
|||||++|++++++.
T Consensus 143 Gmdvv~~I~~~~t~~ 157 (197)
T 1zkc_A 143 GFDVLTAMENVESDP 157 (197)
T ss_dssp CHHHHHHHHHSCBCT
T ss_pred CHHHHHHHHcCCCCC
Confidence 999999999999875
No 45
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=99.87 E-value=1.4e-22 Score=158.40 Aligned_cols=142 Identities=34% Similarity=0.546 Sum_probs=99.7
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccC--------C---CCCCceeEEeecCcEEEcCCCCCCCCCCCc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCAS--------D---YYNGCIFHRNIKGFIVQTGDPTHTGKGGNS 115 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~--------~---~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~ 115 (232)
+.|+....+.++.|+++++||++.+|++++||++||++ + +|+++.|||++++||+|+|+ . ..+.
T Consensus 8 ~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd---~-~~~~- 82 (177)
T 1a58_A 8 RVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGD---F-TKGD- 82 (177)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECC---C-SSSS-
T ss_pred EEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCC---c-cCCC-
Confidence 45777766779999999999999999999999999985 3 89999999999999999985 0 0000
Q ss_pred cCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceee
Q psy8249 116 IWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFF 195 (232)
Q Consensus 116 ~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~ 195 (232)
+ .|--+. .+.. +.+.. ...+|..-|.| ++++...+ .+...++
T Consensus 83 --g---------------~gg~si-------~g~~----f~dE~-~~~~h~~~G~l--------smAn~gp~-tngSQFf 124 (177)
T 1a58_A 83 --G---------------TGGESI-------YGGM----FDDEE-FVMKHDEPFVV--------SMANKGPN-TNGSQFF 124 (177)
T ss_dssp --S---------------SCCCCT-------TSSC----BCCCC-CCSCCCSSSEE--------EECCSSTT-CBCSCEE
T ss_pred --C---------------CCCCcc-------cCCc----ccCcc-cCcccCCCeEE--------EEeeCCCC-CceeEEE
Confidence 0 000000 0000 00000 01122222333 33443333 4556789
Q ss_pred EEEeeeeecCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 196 ITYAAHAHLDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 196 i~I~~~~~ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
|+..++++||+.|+|||+|++|||||++|++++++.
T Consensus 125 It~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~ 160 (177)
T 1a58_A 125 ITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNS 160 (177)
T ss_dssp EESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred EECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999875
No 46
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=99.87 E-value=5.3e-23 Score=159.71 Aligned_cols=141 Identities=35% Similarity=0.576 Sum_probs=102.1
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhc--cCCC-CCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALC--ASDY-YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFED 123 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~--~~~~-y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~ 123 (232)
+.|+....+.++.|+++++||++.+|++++||++|| +.++ |+++.|||++++||+|||++.. +.. .+.
T Consensus 13 ~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~----~~g-~gg---- 83 (172)
T 2haq_A 13 KVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTN----FDG-TGG---- 83 (172)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTT----SSS-SCC----
T ss_pred eEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccC----CCC-CCC----
Confidence 457777777899999999999999999999999999 5678 9999999999999999998541 100 000
Q ss_pred cccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 124 EFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 124 e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
+ ... | .. +.+. ...-+|. -|.| ++++...+ .+...++|+..++++
T Consensus 84 ~---si~----g-------------~~----f~dE-~~~l~h~-~G~l--------smAn~gp~-tngSQFfIt~~~~~~ 128 (172)
T 2haq_A 84 K---SIY----G-------------EK----FADE-NLNVKHF-VGAL--------SMANAGPN-TNGSQFFITTAPTPW 128 (172)
T ss_dssp C---CSS----S-------------SC----BCCC-CCCSCCC-TTEE--------EECCSSTT-CBCSCEEEESSCCGG
T ss_pred c---ccc----C-------------Cc----ccCc-CCCcccC-ceEE--------EEccCCCC-CcccEEEEECCCCCc
Confidence 0 000 0 00 0000 0111222 3444 33343322 455778999999999
Q ss_pred cCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 204 LDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 204 ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
||+.|++||+|++|||||++|+++++++
T Consensus 129 LDg~~~vFG~Vv~G~dvv~~I~~~~t~~ 156 (172)
T 2haq_A 129 LDGRHVVFGKVLDGMDVVLRIEKTKTNS 156 (172)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTSCBCG
T ss_pred cCCCEeEEEEEeCCHHHHHHHHhCCcCC
Confidence 9999999999999999999999999864
No 47
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=99.87 E-value=8.9e-23 Score=159.48 Aligned_cols=142 Identities=35% Similarity=0.630 Sum_probs=99.4
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccCCC--------CCCceeEEeecCcEEEcCCCCCCCCCCCccCC
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCASDY--------YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWG 118 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~--------y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~ 118 (232)
+.|+....+.++.|+++++||++.+|++++||++||++++ |+++.|||++++|++|||+ . ..+. +
T Consensus 12 ~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd---~-~~~~---G 84 (177)
T 1mzw_A 12 VVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGD---F-VNGD---G 84 (177)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECC---T-TTSS---S
T ss_pred EEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCC---c-ccCC---C
Confidence 3466666667899999999999999999999999999988 9999999999999999985 1 0000 0
Q ss_pred CCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEE
Q psy8249 119 KKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITY 198 (232)
Q Consensus 119 ~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I 198 (232)
.|-.+. .+..| .+. ....+|..-|.| ++++...+ .+...++|+.
T Consensus 85 ---------------~gg~si-------~g~~f----~dE-~~~l~h~~~G~l--------smAn~gp~-tngSQFfIt~ 128 (177)
T 1mzw_A 85 ---------------TGVASI-------YRGPF----ADE-NFKLRHSAPGLL--------SMANSGPS-TNGCQFFITC 128 (177)
T ss_dssp ---------------CCCCCT-------TSSCB----CCC-CCCSCCCSTTEE--------EECCSSTT-CBCSCEEEES
T ss_pred ---------------CCCCcc-------CCCcc----cCc-ccccccCCCCEE--------EEccCCCC-CcceEEEEEC
Confidence 000000 00000 000 001112222333 23333323 4556789999
Q ss_pred eeeeecCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 199 AAHAHLDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 199 ~~~~~ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
.++++||+.|++||+|++|||||++|+++++++
T Consensus 129 ~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~ 161 (177)
T 1mzw_A 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGP 161 (177)
T ss_dssp SCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCG
T ss_pred CCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCC
Confidence 999999999999999999999999999999864
No 48
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=99.87 E-value=6.3e-23 Score=161.76 Aligned_cols=129 Identities=36% Similarity=0.633 Sum_probs=94.4
Q ss_pred ccccccceeccccCCCCcchhhhhhc---------------cCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCC
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALC---------------ASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKF 121 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~---------------~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~ 121 (232)
|+.|+|+++||++.+|++++||++|| +.++|+++.|||++++||+|||++..+ +..-
T Consensus 30 t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~--------G~gg 101 (191)
T 1w74_A 30 TNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGT--------GRGG 101 (191)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSS--------SSCC
T ss_pred ecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCC--------CCCC
Confidence 77899999999999999999999999 347999999999999999999996421 1100
Q ss_pred cccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeee
Q psy8249 122 EDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAH 201 (232)
Q Consensus 122 ~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~ 201 (232)
.| . .+.+.....-+|..-|.| +|++... ..+...++|+...+
T Consensus 102 ------------~g--------~---------~f~dE~~~~l~h~~~G~l--------sMAn~gp-ntngSQFFIt~~~~ 143 (191)
T 1w74_A 102 ------------PG--------Y---------KFADEFHPELQFDKPYLL--------AMANAGP-GTNGSQFFITVGKT 143 (191)
T ss_dssp ------------SS--------C---------CBCCCCCTTCCSCSSSEE--------EECCSST-TCBSSCEEEESSCC
T ss_pred ------------CC--------C---------ccccccccCCCcCCCcEE--------EEeeCCC-CCccceEEEEcCCC
Confidence 00 0 000110011112222333 3344332 34556789999999
Q ss_pred eecCCCCcccceeec--chhhhhhhccCcCCC
Q psy8249 202 AHLDLKYTIFGKVID--GLETLDNLEKLPVNP 231 (232)
Q Consensus 202 ~~ld~~~~~fg~V~~--g~~v~~~i~~~~~~~ 231 (232)
++||+.|+|||+|++ |||||++|++++++.
T Consensus 144 ~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~ 175 (191)
T 1w74_A 144 PHLNRRHTIFGEVIDAESQRVVEAISKTATDG 175 (191)
T ss_dssp GGGTTTSCEEEEECSHHHHHHHHHHHTSCBCT
T ss_pred cccCCCeeEEEEEEECCCHHHHHHHHcCCcCC
Confidence 999999999999999 999999999999874
No 49
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=99.87 E-value=6.1e-23 Score=162.34 Aligned_cols=132 Identities=36% Similarity=0.647 Sum_probs=95.4
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++|+++.+|++++||++||+.++|+++.|||++++||+|||++.. .+. +.. ... |
T Consensus 45 T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~---~g~---gg~-------si~----g- 106 (196)
T 2b71_A 45 TNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTG---TGK---GGK-------SIY----G- 106 (196)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTS---SSS---CCC-------BTT----B-
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCC---CCC---CCC-------ccC----C-
Confidence 7899999999999999999999999999999999999999999999998751 110 100 000 0
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccceeec
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFGKVID 216 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg~V~~ 216 (232)
.. +.+.....-+|..-|.| +|++...+ .+...++|+..++++||+.|++||+|++
T Consensus 107 ------------~~----~~dE~~~~l~h~~~G~l--------sMAn~gpn-s~gSQFFIt~~~~~~LDg~~tVFG~Vv~ 161 (196)
T 2b71_A 107 ------------EY----FEDEINKELKHTGAGIL--------SMSNNGPN-TNSSQFFITLAPLPHLDGKHTIFARVSK 161 (196)
T ss_dssp ------------SC----BCCCCCTTCCCCSTTEE--------EECCSSTT-CBSSCEEEESSCCGGGTTTSCEEEEEEE
T ss_pred ------------Cc----ccccccCCcCcCCCeEE--------EEccCCCC-CcccEEEEECCCCCccCCCEeEEEEEec
Confidence 00 00000001112222333 23333322 4556789999999999999999999999
Q ss_pred chhhhhhhccCcCCC
Q psy8249 217 GLETLDNLEKLPVNP 231 (232)
Q Consensus 217 g~~v~~~i~~~~~~~ 231 (232)
|||||++|++++++.
T Consensus 162 Gmdvv~~I~~~~t~~ 176 (196)
T 2b71_A 162 NMTCIENIASVQTTA 176 (196)
T ss_dssp CHHHHHHHHTSCBCT
T ss_pred CHHHHHHHHhCCcCC
Confidence 999999999999875
No 50
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=99.87 E-value=2.2e-22 Score=158.89 Aligned_cols=144 Identities=32% Similarity=0.540 Sum_probs=100.4
Q ss_pred ecceeEEeeCCCccccccceeccccCCCCcchhhhhhcc-----------CCCCCCceeEEeecCcEEEcCCCCCCCCCC
Q psy8249 45 NIKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCA-----------SDYYNGCIFHRNIKGFIVQTGDPTHTGKGG 113 (232)
Q Consensus 45 vi~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~-----------~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~ 113 (232)
..+.|+....+.++.|+++++||++.+|++++||++||+ .++|+++.|||++++||+|+|| . ..+
T Consensus 19 ~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd---~-~~~ 94 (192)
T 2he9_A 19 SPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGD---F-SEG 94 (192)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECC---T-TTS
T ss_pred CCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCc---c-cCC
Confidence 345677777778999999999999999999999999996 4589999999999999999985 1 000
Q ss_pred CccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCce
Q psy8249 114 NSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPI 193 (232)
Q Consensus 114 ~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~ 193 (232)
. + .|-.+. .+.. +.+.. ...+|..-|.| ++++...+ .+...
T Consensus 95 ~---G---------------~gg~si-------yg~~----f~dE~-~~l~h~~~G~l--------sMAn~gp~-tngSQ 135 (192)
T 2he9_A 95 N---G---------------KGGESI-------YGGY----FKDEN-FILKHDRAFLL--------SMANRGKH-TNGSQ 135 (192)
T ss_dssp S---S---------------SCCCCT-------TSSC----BCCCC-CCSCCCSTTEE--------EECCSSTT-CBCSC
T ss_pred C---C---------------CCCCcc-------cCCc----ccCcc-ccCCCCCCeEE--------EEEeCCCC-CcceE
Confidence 0 0 000000 0000 00000 01111111222 33443333 45567
Q ss_pred eeEEEeeeeecCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 194 FFITYAAHAHLDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 194 ~~i~I~~~~~ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
++|+...+++||+.|++||+|++|||||++|+++++++
T Consensus 136 FFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 173 (192)
T 2he9_A 136 FFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDA 173 (192)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred EEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCC
Confidence 89999999999999999999999999999999999875
No 51
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.87 E-value=5.7e-23 Score=160.21 Aligned_cols=131 Identities=38% Similarity=0.659 Sum_probs=94.2
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++||++.+|++++||++||+.++|+++.|||++++||+|||++. +... +.. ... |
T Consensus 28 t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~-----~~g~-gg~-------si~----g- 89 (176)
T 2a2n_A 28 TSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPT-----GTGM-GGE-------SIW----G- 89 (176)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTT-----SSSS-CCC-------CTT----S-
T ss_pred ecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCC-----CCCC-CCC-------ccc----C-
Confidence 789999999999999999999999999999999999999999999999863 1100 100 000 0
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccceeec
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFGKVID 216 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg~V~~ 216 (232)
. ....+++ +.| +|.--|.| ++++... ..+...++|+..++++||+.|++||+|++
T Consensus 90 -------~-~~~dE~~------~~l--~h~~~G~l--------smA~~gp-~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~ 144 (176)
T 2a2n_A 90 -------G-EFEDEFH------STL--RHDRPYTL--------SMANAGS-NTNGSQFFITVVPTPWLDNKHTVFGRVTK 144 (176)
T ss_dssp -------S-CBCCCCC------TTC--CSCSSSEE--------EECCSST-TCBCSCEEEESSCCGGGTTTSCEEEEEEE
T ss_pred -------C-ccccccc------ccc--ccCCceEE--------EEEeCCC-CCcccEEEEECCCCCccCCCeeEEEEEeC
Confidence 0 0000110 001 11111333 2333332 24556789999999999999999999999
Q ss_pred chhhhhhhccCcCC
Q psy8249 217 GLETLDNLEKLPVN 230 (232)
Q Consensus 217 g~~v~~~i~~~~~~ 230 (232)
|||||++|++++++
T Consensus 145 Gmdvv~~I~~~~t~ 158 (176)
T 2a2n_A 145 GMEVVQRISNVKVN 158 (176)
T ss_dssp CHHHHHHHHTSCBC
T ss_pred CHHHHHHHHcCCcc
Confidence 99999999999987
No 52
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=99.87 E-value=5.5e-23 Score=163.18 Aligned_cols=132 Identities=37% Similarity=0.616 Sum_probs=95.0
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+|+++||++.+|++++||++||+.++|+++.|||++++|++|+|++.. .+. -+..+..+ .
T Consensus 18 T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~---~g~--gg~si~g~---~-------- 81 (203)
T 2k7n_A 18 TSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTG---TGR--GGASIYGK---Q-------- 81 (203)
T ss_dssp ESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSS---SSS--CCCTTSCS---C--------
T ss_pred eCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCC---CCC--CCCccCCC---c--------
Confidence 6789999999999999999999999999999999999999999999998751 110 00000000 0
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccceeec
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFGKVID 216 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg~V~~ 216 (232)
+.+.....-+|..-|.| ++++... ..+...++|+..++++||+.|+|||+|++
T Consensus 82 ------------------f~dE~~~~l~h~~~G~l--------sMAn~gp-nsngSQFFIt~~~~~~LDg~~tVFG~Vve 134 (203)
T 2k7n_A 82 ------------------FEDELHPDLKFTGAGIL--------AMANAGP-DTNGSQFFVTLAPTQWLDGKHTIFGRVCQ 134 (203)
T ss_dssp ------------------BCCCCCCSSCCCSSCEE--------EEEESST-TCEEEEEEEESSCCCSSTTTSCEEEEEES
T ss_pred ------------------ccccccccccCCCCeEE--------EEeeCCC-CCcccEEEEEcCCCCccCCCeeEEEEEEc
Confidence 00000001112222333 2333322 24557789999999999999999999999
Q ss_pred chhhhhhhccCcCCC
Q psy8249 217 GLETLDNLEKLPVNP 231 (232)
Q Consensus 217 g~~v~~~i~~~~~~~ 231 (232)
|||||++|+++++++
T Consensus 135 Gmdvv~kI~~~~t~~ 149 (203)
T 2k7n_A 135 GIGMVNRVGMVETNS 149 (203)
T ss_dssp CHHHHHHHHSCCEEE
T ss_pred CHHHHHHHHcCCcCC
Confidence 999999999998864
No 53
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=99.86 E-value=2.9e-22 Score=158.43 Aligned_cols=143 Identities=29% Similarity=0.485 Sum_probs=98.8
Q ss_pred cceeEEeeCCCccccccceeccccCCCCcchhhhhhcc--CCC-CCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCc
Q psy8249 46 IKGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFE 122 (232)
Q Consensus 46 i~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~--~~~-y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~ 122 (232)
.+.|+....+.++.|+|+++||++.+|++++||++||+ .++ |+++.|||++++|++|+|+ . ......-+..+.
T Consensus 28 p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd--~--~~~~g~gg~si~ 103 (193)
T 3k2c_A 28 GNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGD--Y--TAHNGTGGRSIY 103 (193)
T ss_dssp TCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECC--T--TTSSSSCCCCTT
T ss_pred CEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCC--C--CCCCCcCCcccC
Confidence 34567766677999999999999999999999999998 456 9999999999999999984 1 110000000000
Q ss_pred ccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeee
Q psy8249 123 DEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHA 202 (232)
Q Consensus 123 ~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~ 202 (232)
.+ . +.+. ....++..-|.| ++++...+ .+...++|+..+++
T Consensus 104 g~-------------------------~----f~dE-~~~l~h~~~G~l--------smAn~gp~-t~gSQFFIt~~~~~ 144 (193)
T 3k2c_A 104 GE-------------------------K----FPDE-NFELKHTKEGIL--------SMANCGAH-TNGSQFFITLGKTQ 144 (193)
T ss_dssp SS-------------------------C----BCCC-CCCSCCCSTTEE--------EECCSSTT-CBCSCEEEESSCCG
T ss_pred CC-------------------------c----cccc-ccccccCCCcEE--------EEEeCCCC-CCccEEEEECCCCc
Confidence 00 0 0000 001112112333 23333322 44567899999999
Q ss_pred ecCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 203 HLDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 203 ~ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
+||+.|+|||+|++|||||++|+++++++
T Consensus 145 ~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 173 (193)
T 3k2c_A 145 WLDEKHVVFGEVVEGMDVVHKIAKYGSES 173 (193)
T ss_dssp GGTTTSCEEEEEEECHHHHHHHHTTCCTT
T ss_pred ccCCCccEEEEEeCCHHHHHHHHhcCCCC
Confidence 99999999999999999999999998864
No 54
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=99.86 E-value=3.3e-22 Score=155.45 Aligned_cols=142 Identities=30% Similarity=0.525 Sum_probs=99.2
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccC--CC-CCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCAS--DY-YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFED 123 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~--~~-y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~ 123 (232)
+.|+....+.|+.|+++++||++.+|++++||++||++ ++ |+++.|||++++|++|+|++ ..+. +
T Consensus 12 ~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~----~~~~---G----- 79 (172)
T 2cmt_A 12 RVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDF----VKGD---G----- 79 (172)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCT----TTSS---S-----
T ss_pred EEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCc----cCCC---C-----
Confidence 34666666679999999999999999999999999985 67 99999999999999999874 0000 0
Q ss_pred cccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 124 EFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 124 e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
.|-.+. .+.. +.+.. ...+|..-|.| ++++...+ .+...++|+..++++
T Consensus 80 ----------~gg~si-------~g~~----f~dE~-~~l~h~~~G~l--------smA~~gp~-t~gSQFfIt~~~~~~ 128 (172)
T 2cmt_A 80 ----------TGGKSI-------YGRK----FDDEN-FQLRHEGFGVL--------SMANSGPN-TNGSQFFICTTKCDW 128 (172)
T ss_dssp ----------SCCCBT-------TBSC----BCCCC-CCSCCCSTTEE--------EECCSSTT-CBCSCEEEESSCCGG
T ss_pred ----------CCCCcc-------CCCc----ccccc-cCcccCCceEE--------EEeeCCCC-CcccEEEEECCCCCc
Confidence 000000 0000 00100 01112212333 33343323 455678999999999
Q ss_pred cCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 204 LDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 204 ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
||+.|++||+|++|||||++|++++++.
T Consensus 129 LDg~~tvFG~Vv~G~dvv~~I~~~~~~~ 156 (172)
T 2cmt_A 129 LDGKHVVFGRVVDGQNVVKKMESVGSKS 156 (172)
T ss_dssp GTTTSCEEEEEEECHHHHHHGGGGCCTT
T ss_pred cCCCeeEEEEEEcCHHHHHHHHhCCCCC
Confidence 9999999999999999999999988753
No 55
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.86 E-value=2.5e-22 Score=158.21 Aligned_cols=142 Identities=32% Similarity=0.473 Sum_probs=98.3
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccC--C-CCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCAS--D-YYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFED 123 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~--~-~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~ 123 (232)
+.|+....+.++.|+++++||++.+|++++||++||++ + +|+++.|||+++++++|||+ . ..+.
T Consensus 14 ~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd---~-~~~~--------- 80 (185)
T 4fru_A 14 KVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGD---F-TRGD--------- 80 (185)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECC---T-TTSS---------
T ss_pred EEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECC---C-CCCC---------
Confidence 34666666678999999999999999999999999987 4 79999999999999999985 0 0000
Q ss_pred cccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 124 EFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 124 e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
..|-.+.- +..| .+. ....+|..-|.| ++++...+ .+...++|+...+++
T Consensus 81 ---------g~gg~si~-------g~~f----~de-~~~~~h~~~G~l--------sma~~gp~-t~~SQFfI~~~~~~~ 130 (185)
T 4fru_A 81 ---------GTGGKSIY-------GERF----PDE-NFKLKHYGPGWV--------SMANAGKD-TNGSQFFITTVKTAW 130 (185)
T ss_dssp ---------SSCCCBTT-------BSCB----CCC-CCCSCCCSTTEE--------EECCSSTT-CBCSCEEEESSCCGG
T ss_pred ---------CCCCcccc-------CCcc----Ccc-ccccCcCCCeEE--------EEeeCCCC-CcceEEEEEeCCCcc
Confidence 00000000 0000 000 001112112333 23333322 445678999999999
Q ss_pred cCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 204 LDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 204 ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
||+.|++||+|++|||||++|++++++.
T Consensus 131 Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~ 158 (185)
T 4fru_A 131 LDGKHVVFGKVLEGMEVVRKVETTKTDG 158 (185)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred cCCCccEEEEEeCCHHHHHHHHhCCCCC
Confidence 9999999999999999999999999874
No 56
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=99.86 E-value=3.7e-22 Score=154.33 Aligned_cols=141 Identities=29% Similarity=0.504 Sum_probs=98.9
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhcc--CCC-CCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFED 123 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~--~~~-y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~ 123 (232)
+.|+....+.++.|+++++||++.+|++++||++||+ .++ |+++.|||++++|++|+|++ ..+.. .+.
T Consensus 5 ~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~----~~~~g-~gg---- 75 (165)
T 2z6w_A 5 LVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDF----TNHNG-TGG---- 75 (165)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCT----TTSSS-SCC----
T ss_pred EEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCc----cCCCC-CCC----
Confidence 3466666677899999999999999999999999999 788 99999999999999999874 10000 000
Q ss_pred cccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 124 EFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 124 e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
+ ... | .. +.+. ...-+|.--|.| ++++... ..+...++|+..++++
T Consensus 76 ~---si~----g-------------~~----f~dE-~~~l~h~~~G~l--------smA~~gp-~s~~SQFfI~~~~~~~ 121 (165)
T 2z6w_A 76 K---SIY----G-------------SR----FPDE-NFTLKHVGPGVL--------SMANAGP-NTNGSQFFICTIKTDW 121 (165)
T ss_dssp C---BTT----B-------------SC----BCCC-CCCSCCCSTTEE--------EECCSST-TCBCSCEEEESSCCGG
T ss_pred C---ccc----C-------------Cc----ccCc-ccccccCCCCEE--------EEeeCCC-CCcccEEEEEcCCCcc
Confidence 0 000 0 00 0010 000111111333 3344332 3455678999999999
Q ss_pred cCCCCcccceeecchhhhhhhccCcCC
Q psy8249 204 LDLKYTIFGKVIDGLETLDNLEKLPVN 230 (232)
Q Consensus 204 ld~~~~~fg~V~~g~~v~~~i~~~~~~ 230 (232)
||+.|++||+|++|||||++|+++++.
T Consensus 122 Ldg~~~vFG~Vv~G~dvv~~I~~~~~~ 148 (165)
T 2z6w_A 122 LDGKHVVFGHVIEGMDVVKKIESFGSK 148 (165)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHHTCCT
T ss_pred cCCCeeEEEEEEcCHHHHHHHHhCCCC
Confidence 999999999999999999999988763
No 57
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=99.86 E-value=6.4e-23 Score=159.22 Aligned_cols=130 Identities=30% Similarity=0.475 Sum_probs=94.1
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++||++.+|++++||++||+.++|+++.|||++++||+|||++.. +.. + .. .+
T Consensus 10 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~---------~~~---~-----~~--~~- 69 (167)
T 3s6m_A 10 TNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEP---------GLK---Q-----KP--TD- 69 (167)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEET---------TTE---E-----CC--CC-
T ss_pred eCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccC---------CCC---C-----CC--CC-
Confidence 7899999999999999999999999999999999999999999999998641 100 0 00 00
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCC--------C
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLK--------Y 208 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~--------~ 208 (232)
..-++ ++. ....| .-|.| ++++..-...+...++|+..++++||.. |
T Consensus 70 ----~~~~~----E~~---~~l~~------~~G~l--------smA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~ 124 (167)
T 3s6m_A 70 ----APIAN----EAN---NGLKN------DTYTI--------AMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGY 124 (167)
T ss_dssp ----CCBCC----CGG---GCCCC------CTTEE--------EECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCC
T ss_pred ----CccCC----ccc---ccccC------CccEE--------EEecCCCCCCccceEEEEcCCchhcCCcccccCCCCc
Confidence 00000 000 00011 11333 2333222234556789999999999998 9
Q ss_pred cccceeecchhhhhhhccCcCCC
Q psy8249 209 TIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 209 ~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
++||+|++|||||++|+++++++
T Consensus 125 ~VFG~Vv~G~dvv~~I~~~~t~~ 147 (167)
T 3s6m_A 125 AVFGKVVEGQDIVDKIKAVKTGS 147 (167)
T ss_dssp CEEEEEEECHHHHHHHTTSCBBC
T ss_pred eEEEEEEcCHHHHHHHHcCCcCC
Confidence 99999999999999999999875
No 58
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.86 E-value=1.2e-22 Score=157.49 Aligned_cols=129 Identities=32% Similarity=0.557 Sum_probs=94.0
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++||++.+|++++||++||+.++|+++.|||++++||+|||++... +. + . . ....
T Consensus 11 t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~--------~~----~-~---~--~g~~ 72 (166)
T 1v9t_A 11 TSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQ--------MQ----Q-K---K--PNPP 72 (166)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTT--------CC----B-C---C--CCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcC--------CC----C-C---C--CCCc
Confidence 78999999999999999999999999999999999999999999999987531 10 0 0 0 0000
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCC-----Cccc
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLK-----YTIF 211 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~-----~~~f 211 (232)
. ++ +++ +.+- |. -|.| +|++..-...+...++|+..++++||.. |++|
T Consensus 73 --~----~d----E~~------~~l~--~~-~G~l--------smA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvF 125 (166)
T 1v9t_A 73 --I----KN----EAD------NGLR--NT-RGTI--------AMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVF 125 (166)
T ss_dssp --B----CC----CGG------GSCC--CC-TTEE--------EECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEE
T ss_pred --c----cc----ccc------cccc--CC-ceEE--------EEeecCCCCCccceEEEEeCCccccCCccCcCCeeEE
Confidence 0 00 100 0010 11 1333 3443322234556789999999999998 9999
Q ss_pred ceeecchhhhhhhccCcCC
Q psy8249 212 GKVIDGLETLDNLEKLPVN 230 (232)
Q Consensus 212 g~V~~g~~v~~~i~~~~~~ 230 (232)
|+|++|||||++|++++++
T Consensus 126 G~Vv~G~dvv~~I~~~~~~ 144 (166)
T 1v9t_A 126 GKVVKGMDVADKISQVPTH 144 (166)
T ss_dssp EEEEECHHHHHHHHTSCEE
T ss_pred EEEecCHHHHHHHHhCCCC
Confidence 9999999999999999885
No 59
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=99.86 E-value=5.7e-22 Score=154.35 Aligned_cols=142 Identities=29% Similarity=0.445 Sum_probs=98.4
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhcc--CCC-CCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFED 123 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~--~~~-y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~ 123 (232)
+.|+....+.|+.|+++++||++.+|++++||++||+ .++ |+++.|||++++||+|+|++ ..+.. .+..
T Consensus 13 ~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~----~~~~g-~gg~--- 84 (173)
T 2r99_A 13 QVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDF----TNHNG-TGGK--- 84 (173)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCT----TTSSS-SCCC---
T ss_pred EEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCc----CCCCC-CCCC---
Confidence 3455555567899999999999999999999999996 466 99999999999999999874 10000 0000
Q ss_pred cccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 124 EFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 124 e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
.+. +..| .+. ....+|..-|.| +|++...+ .+...++|+..++++
T Consensus 85 ----si~-----------------g~~f----~dE-~~~l~h~~~G~l--------smA~~gp~-t~gSQFfIt~~~~~~ 129 (173)
T 2r99_A 85 ----SIY-----------------GKKF----DDE-NFILKHTGPGLL--------SMANSGPN-TNGSQFFLTCDKTDW 129 (173)
T ss_dssp ----BTT-----------------BSCB----CCC-CCCSCCCSSSEE--------EECCSSTT-CBCSCEEEESSCCGG
T ss_pred ----ccC-----------------CCcc----cCc-ccCcccCCCcEE--------EEccCCCC-CcccEEEEECCCCCc
Confidence 000 0000 010 011122222444 33333333 455678999999999
Q ss_pred cCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 204 LDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 204 ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
||+.|++||+|++|||||++|++++++.
T Consensus 130 LDg~~tVFG~Vv~G~dvv~~I~~~~~~~ 157 (173)
T 2r99_A 130 LDGKHVVFGEVTEGLDVLRQIEAQGSKD 157 (173)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTTCCTT
T ss_pred cCCCeeEEEEEEcCHHHHHHHHhCCCCC
Confidence 9999999999999999999999988753
No 60
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=99.86 E-value=4.5e-22 Score=156.32 Aligned_cols=142 Identities=34% Similarity=0.481 Sum_probs=98.7
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccCCC---CCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCASDY---YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFED 123 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~---y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~ 123 (232)
+.|+...-+.++.|+++++||++.+|++++||++||++++ |+++.|||++++|++|||++ . .....-+..+..
T Consensus 24 ~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~--~--~~~g~gg~si~g 99 (184)
T 3rdd_A 24 TVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDF--T--RHNGTGGKSIYG 99 (184)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCT--T--TSSSSCCCBTTB
T ss_pred EEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCC--C--CCCCCCCcccCC
Confidence 4566666677899999999999999999999999998766 99999999999999999974 1 111000000000
Q ss_pred cccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 124 EFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 124 e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
+ .. ++. .. ..++..-|.| ++++...+ .+...++|+..++++
T Consensus 100 ~---~~--------------~de-----------~~--~l~h~~~G~l--------smA~~gp~-s~gSQFfIt~~~~~~ 140 (184)
T 3rdd_A 100 E---KF--------------EDE-----------NF--ILKHTGPGIL--------SMANAGPN-TNGSQFFICTAKTEW 140 (184)
T ss_dssp S---CB--------------CCC-----------CC--CSCCCSTTEE--------EECCSSTT-CBSSCEEEESSCCGG
T ss_pred C---cc--------------cCc-----------cc--ccccCCCcEE--------EEEeCCCC-CcccEEEEEeCCchh
Confidence 0 00 000 00 0011111333 23333322 445678999999999
Q ss_pred cCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 204 LDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 204 ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
||+.|+|||+|++||||||+|++++++.
T Consensus 141 LDg~~tVFG~Vv~G~dvv~~I~~~~~~~ 168 (184)
T 3rdd_A 141 LDGKHVVFGKVKEGMNIVEAMERFGSRN 168 (184)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTTCCTT
T ss_pred hCCCceEEEEEecCHHHHHHHHhcCCCC
Confidence 9999999999999999999999988753
No 61
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.86 E-value=1.1e-22 Score=157.32 Aligned_cols=129 Identities=29% Similarity=0.577 Sum_probs=93.3
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++||++.+|++++||++||+.++|+++.|||++++||+|||++. . + . .+ . ..
T Consensus 6 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~-----~----~-~--g~---~----~~-- 64 (164)
T 1lop_A 6 TNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFE-----P----G-M--KQ---K----AT-- 64 (164)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEE-----T----T-T--EE---C----CC--
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcc-----c----C-C--Cc---C----CC--
Confidence 789999999999999999999999999999999999999999999999853 0 0 0 00 0 00
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCC--------C
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLK--------Y 208 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~--------~ 208 (232)
+. ....+++ +.| .|. -|.| ++++..-...+...++|+..++++||+. |
T Consensus 65 ------g~-~~~dE~~------~~l--~~~-~G~l--------smA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~ 120 (164)
T 1lop_A 65 ------KE-PIKNEAN------NGL--KNT-RGTL--------AMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGY 120 (164)
T ss_dssp ------CC-CBCCCCC------SSC--CCC-TTEE--------EECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCC
T ss_pred ------CC-ccccccc------ccc--ccC-ccEE--------EEeecCCCCCccceEEEEcCCccccCCccccccCCce
Confidence 00 0000110 001 111 2333 3333212234566789999999999997 9
Q ss_pred cccceeecchhhhhhhccCcCC
Q psy8249 209 TIFGKVIDGLETLDNLEKLPVN 230 (232)
Q Consensus 209 ~~fg~V~~g~~v~~~i~~~~~~ 230 (232)
++||+|++|||||++|++++++
T Consensus 121 tvFG~Vv~G~dvv~~I~~~~t~ 142 (164)
T 1lop_A 121 CVFAEVVDGMDEVDKIKGVATG 142 (164)
T ss_dssp CEEEEEEECHHHHHHHHTSCEE
T ss_pred EEEEEEecCHHHHHHHHhCCcC
Confidence 9999999999999999999885
No 62
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.86 E-value=2.6e-22 Score=158.05 Aligned_cols=142 Identities=31% Similarity=0.511 Sum_probs=100.3
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhcc--CCC-CCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFED 123 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~--~~~-y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~ 123 (232)
+.|+....+.++.|+++++||++.+|++++||++||+ .++ |+++.|||++++||+|||++.. +.. .+.
T Consensus 17 ~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~----~~g-~gg---- 87 (188)
T 3ich_A 17 KVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTR----GDG-TGG---- 87 (188)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTT----SSS-SCC----
T ss_pred eEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccC----CCC-CCC----
Confidence 4466666667899999999999999999999999996 568 9999999999999999998531 100 000
Q ss_pred cccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeee
Q psy8249 124 EFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAH 203 (232)
Q Consensus 124 e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ 203 (232)
+ ... | .. +.+. ....+|..-|.| +|++... ..+...++|+...+++
T Consensus 88 ~---si~----g-------------~~----f~dE-~~~l~h~~~G~l--------smAn~gp-~tngSQFfIt~~~~~~ 133 (188)
T 3ich_A 88 K---SIY----G-------------ER----FPDE-NFKLKHYGPGWV--------SMANAGK-DTNGSQFFITTVKTAW 133 (188)
T ss_dssp C---BTT----B-------------SC----BCCC-CCCSCCCSTTEE--------EECCSST-TCBCSCEEEESSCCGG
T ss_pred c---ccc----C-------------Cc----cccc-ccCcccCCCeEE--------EEccCCC-CCcccEEEEECCCCcc
Confidence 0 000 0 00 0000 011112222333 2333332 2455678999999999
Q ss_pred cCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 204 LDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 204 ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
||+.|+|||+|++|||||++|++++++.
T Consensus 134 LDg~~tVFG~Vv~G~dvv~~I~~~~~~~ 161 (188)
T 3ich_A 134 LDGKHVVFGKVLEGMEVVRKVESTKTDS 161 (188)
T ss_dssp GTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred cCCCeeEEEEEeCCHHHHHHHHhCCcCC
Confidence 9999999999999999999999999874
No 63
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=99.86 E-value=4.3e-22 Score=154.69 Aligned_cols=141 Identities=35% Similarity=0.594 Sum_probs=98.1
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccC-CC--------CCCceeEEeecCcEEEcCCCCCCCCCCCccC
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCAS-DY--------YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIW 117 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~-~~--------y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~ 117 (232)
+.||....+.++.|+++++||++.+|++++||++||++ ++ |+++.|||++++||+|+|+ . ..+.
T Consensus 5 ~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd---~-~~~~--- 77 (170)
T 1qng_A 5 KVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGD---I-TNGN--- 77 (170)
T ss_dssp EEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECC---T-TTSS---
T ss_pred EEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCC---c-cCCC---
Confidence 44666666678999999999999999999999999984 77 9999999999999999985 0 0000
Q ss_pred CCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEE
Q psy8249 118 GKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFIT 197 (232)
Q Consensus 118 ~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~ 197 (232)
+ .|-.+. .+.. +.+. ....+|..-|.| +|++...+ .+...++|+
T Consensus 78 g---------------~gg~si-------~g~~----f~dE-~~~l~h~~~G~l--------smAn~gp~-tngSQFfIt 121 (170)
T 1qng_A 78 G---------------SGGESI-------YGRS----FTDE-NFNMKHDQPGLL--------SMANAGPN-TNSSQFFIT 121 (170)
T ss_dssp S---------------SCCCBT-------TBSC----BCCC-CCCSCCCSTTEE--------EECCSSTT-CBCSCEEEE
T ss_pred C---------------CCCccc-------cCCc----cccc-ccccccCCCCEE--------EEeecCCC-CcccEEEEE
Confidence 0 000000 0000 0000 001112212333 23333333 455678999
Q ss_pred EeeeeecCCCCcccceeecchhhhhhhccCcCC
Q psy8249 198 YAAHAHLDLKYTIFGKVIDGLETLDNLEKLPVN 230 (232)
Q Consensus 198 I~~~~~ld~~~~~fg~V~~g~~v~~~i~~~~~~ 230 (232)
..++++||+.|++||+|++|||||++|++++++
T Consensus 122 ~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~ 154 (170)
T 1qng_A 122 LVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAK 154 (170)
T ss_dssp SSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT
T ss_pred CCCCcccCCCeeEEEEEECCHHHHHHHHhCCCC
Confidence 999999999999999999999999999999884
No 64
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=99.86 E-value=5.8e-22 Score=154.40 Aligned_cols=142 Identities=31% Similarity=0.485 Sum_probs=98.6
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccC--C--------CCCCceeEEeecCcEEEcCCCCCCCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCAS--D--------YYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~--~--------~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~ 116 (232)
+.|+....+.++.|+++++||++.+|++++||++||++ + +|+++.|||++++||+|+|+ . ..+.
T Consensus 5 ~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd---~-~~~~-- 78 (173)
T 2igv_A 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGD---F-TRGN-- 78 (173)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECC---T-TTSS--
T ss_pred EEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCC---C-CCCC--
Confidence 44666666778999999999999999999999999987 4 79999999999999999985 0 0000
Q ss_pred CCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeE
Q psy8249 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFI 196 (232)
Q Consensus 117 ~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i 196 (232)
+ .|-.+. .+.. +.+.. ...+|..-|.| ++++...+ .+...++|
T Consensus 79 -G---------------~gg~si-------yg~~----f~dE~-~~l~h~~~G~l--------smAn~gp~-tngSQFfI 121 (173)
T 2igv_A 79 -G---------------TGGESI-------YGEK----FPDEN-FKEKHTGPGVL--------SMANAGPN-TNGSQFFL 121 (173)
T ss_dssp -S---------------SCCCBT-------TBSC----BCCCC-CCSCCCSTTEE--------EECCSSTT-CBSSCEEE
T ss_pred -C---------------CCCCcc-------CCCc----ccCcc-cccCCCCCeEE--------EEeeCCCC-CcceEEEE
Confidence 0 000000 0000 00100 01112212333 33343333 45567899
Q ss_pred EEeeeeecCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 197 TYAAHAHLDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 197 ~I~~~~~ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
+...+++||+.|++||+|++|||||++|++++++.
T Consensus 122 t~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~ 156 (173)
T 2igv_A 122 CTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQS 156 (173)
T ss_dssp ESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT
T ss_pred EcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999988753
No 65
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=99.85 E-value=1.1e-21 Score=154.06 Aligned_cols=141 Identities=32% Similarity=0.502 Sum_probs=97.8
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccC--CC--------CCCceeEEeecCcEEEcCCCCCCCCCCCcc
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCAS--DY--------YNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~--~~--------y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~ 116 (232)
+.|+....+.++.|+++++||++.+|++++||++||++ ++ |+++.|||++++||+|+|+ . ..+.
T Consensus 21 ~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd---~-~~~~-- 94 (186)
T 2poy_A 21 VVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGD---F-TRGD-- 94 (186)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECC---T-TTSS--
T ss_pred EEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCC---C-CCCC--
Confidence 45666666678999999999999999999999999974 56 9999999999999999985 0 0000
Q ss_pred CCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeE
Q psy8249 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFI 196 (232)
Q Consensus 117 ~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i 196 (232)
+ .|-.+. .+.. +.+.. ....|..-|.| ++++...+ .+...++|
T Consensus 95 -G---------------~gg~si-------~g~~----f~dE~-~~l~h~~~G~l--------sMAn~gpn-tngSQFFI 137 (186)
T 2poy_A 95 -G---------------TGGESI-------YGSK----FRDEN-FVYTHDAPFLL--------SMANAGPN-TNGSQFFI 137 (186)
T ss_dssp -S---------------SCCCCT-------TC-C----BCCCC-CCSCCCSTTEE--------EECCSSTT-CBCSCEEE
T ss_pred -C---------------CCCCcc-------CCCc----ccCcc-cccccCCCcEE--------EEeeCCCC-CcccEEEE
Confidence 0 000000 0000 00100 01112212333 23343333 45567899
Q ss_pred EEeeeeecCCCCcccceeecchhhhhhhccCcCC
Q psy8249 197 TYAAHAHLDLKYTIFGKVIDGLETLDNLEKLPVN 230 (232)
Q Consensus 197 ~I~~~~~ld~~~~~fg~V~~g~~v~~~i~~~~~~ 230 (232)
+..++++||+.|+|||+|++|||||++|++++++
T Consensus 138 t~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~ 171 (186)
T 2poy_A 138 TTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQ 171 (186)
T ss_dssp ESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCT
T ss_pred ECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999874
No 66
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=99.83 E-value=2.5e-21 Score=156.20 Aligned_cols=142 Identities=35% Similarity=0.536 Sum_probs=99.3
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccCC--------CCCCceeEEeecCcEEEcCCCCCCCCCCCccCC
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCASD--------YYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWG 118 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~~--------~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~ 118 (232)
..|+....+.++.|+|+++||++.+|++++||++||+++ +|+++.|||++++||+|||+ . ..+. +
T Consensus 61 ~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD---~-~~g~---G 133 (229)
T 1z81_A 61 VVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGD---F-INHN---G 133 (229)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECC---T-TTSS---S
T ss_pred EEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCC---C-cCCC---C
Confidence 346665556688999999999999999999999999987 69999999999999999985 0 0000 0
Q ss_pred CCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEE
Q psy8249 119 KKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITY 198 (232)
Q Consensus 119 ~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I 198 (232)
.|-.+. .+..| .+. ....+|..-|.| ++++...+ .+...++|+.
T Consensus 134 ---------------~Gg~si-------yg~~f----~dE-~~~l~h~~~G~L--------sMAn~gpn-tngSQFFIt~ 177 (229)
T 1z81_A 134 ---------------SGSLSI-------YGEKF----DDE-NFDIKHDKEGLL--------SMANSGPN-TNGCQFFITT 177 (229)
T ss_dssp ---------------CCCCBT-------TBSCC----CCC-CCCSCCCSTTEE--------EECCSSSS-CCCSCEEEES
T ss_pred ---------------CCCCcc-------CCCcc----ccc-ccccccCCCcEE--------EeccCCCC-CcccEEEEEC
Confidence 000000 00000 000 001112212333 33444333 4566789999
Q ss_pred eeeeecCCCCcccceee--cchhhhhhhccCcCCC
Q psy8249 199 AAHAHLDLKYTIFGKVI--DGLETLDNLEKLPVNP 231 (232)
Q Consensus 199 ~~~~~ld~~~~~fg~V~--~g~~v~~~i~~~~~~~ 231 (232)
..+++||+.|+|||+|+ +|||||++|+++++++
T Consensus 178 ~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~ 212 (229)
T 1z81_A 178 KKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTP 212 (229)
T ss_dssp SCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCT
T ss_pred CCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCC
Confidence 99999999999999999 9999999999999875
No 67
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.82 E-value=6.3e-21 Score=163.23 Aligned_cols=149 Identities=23% Similarity=0.337 Sum_probs=95.3
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCc---cCCCCCcccccccccccc
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNS---IWGKKFEDEFKETLKHSE 133 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~---~~~~~~~~e~~~~l~~~~ 133 (232)
++.|+|+++||++.+|+|++||++||+.++|+|+.|||+ ++||+||||+.+++.+... ..+..++.|.... .
T Consensus 185 ~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~~~~~g~~~~iP~E~~~~----G 259 (369)
T 3rfy_A 185 IEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEIMVT----G 259 (369)
T ss_dssp CSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCCSCCCCCCCSSSSSSCSS----S
T ss_pred ccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCccCcccCcCcccCcccccc----C
Confidence 568999999999999999999999999999999999999 9999999999876554211 1223444453210 0
Q ss_pred cceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccC--CCCCCCCceeeEEE-------eeeeec
Q psy8249 134 RGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKL--PVNPNHKPIFFITY-------AAHAHL 204 (232)
Q Consensus 134 ~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~--~~~~~~~P~~~i~I-------~~~~~l 204 (232)
.+.-.+ +.......|+-.....+ |..-|.| +|++. ..+ .+...++|+. ..+++|
T Consensus 260 ~g~piy---g~~fedegf~~~~~~L~-----h~~~G~L--------sMAns~~gPn-SngSQFFItl~d~~L~~~~~~~L 322 (369)
T 3rfy_A 260 EKTPFY---GSTLEELGLYKAQVVIP-----FNAFGTM--------AMAREEFEND-SGSSQVFWLLKESELTPSNSNIL 322 (369)
T ss_dssp SCCSCC---CSSTGGGTEEEEEEEEC-----CCCCCCC--------CCSSCCCCCC-CSSCCCCCCCEEEEECSCCCSSS
T ss_pred CCCCcC---CCccccccccccccccc-----cCCCceE--------EEeecCCCCC-CccceEEEEecccccCCCCCccc
Confidence 000000 00000000100000000 1112222 33333 222 3445677877 368999
Q ss_pred CCCCcccceeecchhhhhhhccC
Q psy8249 205 DLKYTIFGKVIDGLETLDNLEKL 227 (232)
Q Consensus 205 d~~~~~fg~V~~g~~v~~~i~~~ 227 (232)
|+.|+|||+|++|||||++|++.
T Consensus 323 DgkytVFG~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 323 DGRYAVFGYVTDNEDFLADLKVG 345 (369)
T ss_dssp CSCEEEEEEEEESTTGGGGCCTT
T ss_pred CCCeeEEEEEecCHHHHHHHhCC
Confidence 99999999999999999999875
No 68
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.82 E-value=2.9e-21 Score=156.82 Aligned_cols=145 Identities=23% Similarity=0.302 Sum_probs=98.5
Q ss_pred ceeEEeeCCCccccccceeccccCCCCcchhhhhhccCC-------------------C-CCCceeEEeecCcEEEcCCC
Q psy8249 47 KGFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCASD-------------------Y-YNGCIFHRNIKGFIVQTGDP 106 (232)
Q Consensus 47 ~~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~~-------------------~-y~g~~~~rv~~~~~vq~G~~ 106 (232)
+.||....+.++.|+|+++||++.+|++++||++||++. + |+++.|||++++||||||++
T Consensus 16 ~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~ 95 (234)
T 2ose_A 16 RVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDI 95 (234)
T ss_dssp EEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCC
T ss_pred EEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCc
Confidence 346665556689999999999999999999999999953 6 99999999999999999985
Q ss_pred CCCCCCCCccCCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhccc---
Q psy8249 107 THTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEK--- 183 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~--- 183 (232)
.. +.. .+.. ... |.. ..|. +|= ...-.|..-|.| +|++
T Consensus 96 ~~----g~G-~Gg~-------siy----g~~----~~p~----~f~-------~~~l~h~~~G~l--------sMAn~~~ 136 (234)
T 2ose_A 96 YN----SNG-SSAG-------TVY----CDE----PIPP----VFG-------DYFYPHESKGLL--------SLVPYTD 136 (234)
T ss_dssp C---------CCCC-------CTT----TTC----CBCC----CCC-------SCCCCSCSTTEE--------EECCEEC
T ss_pred cC----CCC-CCCc-------ccc----CCc----cCcc----ccc-------CcCccCCCCCEE--------EEecccc
Confidence 41 100 0000 000 000 0000 010 011122222333 2333
Q ss_pred -CCCCCCCCceeeEEEee------eeecCCCCcccceeecchhhhhhhccCcCCC
Q psy8249 184 -LPVNPNHKPIFFITYAA------HAHLDLKYTIFGKVIDGLETLDNLEKLPVNP 231 (232)
Q Consensus 184 -~~~~~~~~P~~~i~I~~------~~~ld~~~~~fg~V~~g~~v~~~i~~~~~~~ 231 (232)
... ..+...++|+... +++||+.|+|||+|++|||||++|++++++.
T Consensus 137 ~~gp-ntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~t~~ 190 (234)
T 2ose_A 137 ESGN-RYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMIKPY 190 (234)
T ss_dssp TTSC-EEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHTCCC
T ss_pred cCCC-CCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCC
Confidence 222 2345578999998 9999999999999999999999999998875
No 69
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=99.82 E-value=2.9e-21 Score=150.22 Aligned_cols=133 Identities=35% Similarity=0.539 Sum_probs=87.2
Q ss_pred CccccccceeccccCCCCcchhhhhhcc--CCC-CCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCccccccccccc
Q psy8249 56 PTHTGDIKIELFCEDCPKTCENFLALCA--SDY-YNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHS 132 (232)
Q Consensus 56 ~t~~G~i~i~l~~~~~P~~~~~F~~l~~--~~~-y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~ 132 (232)
.|+.|+++++||++.+|++++||++||+ .++ |+++.|||++++||+|+|++.. +. +
T Consensus 18 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~----~~---g-------------- 76 (172)
T 2c3b_A 18 ETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTR----GN---G-------------- 76 (172)
T ss_dssp CCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC---------------------------
T ss_pred ecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCC----CC---C--------------
Confidence 3677999999999999999999999999 457 9999999999999999998431 00 0
Q ss_pred ccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccc
Q psy8249 133 ERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFG 212 (232)
Q Consensus 133 ~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg 212 (232)
.|--+. .+.. +.+. ....+|..-|.| ++++...+ .+...++|+...+++||+.|++||
T Consensus 77 -~gg~si-------~g~~----f~dE-~~~~~h~~~G~l--------smA~~gp~-t~gSQFfIt~~~~~~LDg~~tvFG 134 (172)
T 2c3b_A 77 -TGGRSI-------YGDK----FADE-NFSRKHDKKGIL--------SMANAGPN-TNGSQFFITTAVTSWLDGKHVVFG 134 (172)
T ss_dssp -----------------------------CHHHHHTCEE--------EEC----------CEEEECSCCTTCCSCCEEEE
T ss_pred -CCCccc-------CCCc----ccCc-ccccccCCCeEE--------EEeeCCCC-CcccEEEEECCCCCccCCCeeEEE
Confidence 000000 0000 0000 011112222333 23333222 455678999999999999999999
Q ss_pred eeec--chhhhhhhccCcCCC
Q psy8249 213 KVID--GLETLDNLEKLPVNP 231 (232)
Q Consensus 213 ~V~~--g~~v~~~i~~~~~~~ 231 (232)
+|++ |||||++|+++++++
T Consensus 135 ~Vv~~~G~dvv~~I~~~~t~~ 155 (172)
T 2c3b_A 135 EVADEKSYSVVKEIEALGSSS 155 (172)
T ss_dssp EECSHHHHHHHHHHHTTCCTT
T ss_pred EEEecCCHHHHHHHHhCCCCC
Confidence 9999 999999999998864
No 70
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.81 E-value=5.9e-21 Score=154.73 Aligned_cols=134 Identities=39% Similarity=0.663 Sum_probs=91.6
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+|+++||++.+|++++||++||+.++|+++.|||++++||+|||++..+ +. -+..+... ...+.
T Consensus 28 T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~---G~--Gg~si~~~-g~~f~------ 95 (232)
T 3bkp_A 28 TSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGT---GR--GGADTTFD-GKPFD------ 95 (232)
T ss_dssp ETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSS---SS--CCCCCTTT-TCCBC------
T ss_pred ECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCC---CC--CCCccccC-CCccC------
Confidence 67899999999999999999999999999999999999999999999997631 11 01110000 00000
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCC-------------CCCCceeeEEEeeeee
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVN-------------PNHKPIFFITYAAHAH 203 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~-------------~~~~P~~~i~I~~~~~ 203 (232)
+ ++ .+.| +|..-|.| +|++.... ..+...++|+...+++
T Consensus 96 --------d----E~------~~~l--~h~~~G~l--------sMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~ 147 (232)
T 3bkp_A 96 --------V----ET------HPRL--KFRYRGLV--------GVANLGRSSKDAENDERGRSLGTNGNQFFITLARADV 147 (232)
T ss_dssp --------C----CC------CTTC--CCCSTTEE--------EECCCC----------------CBCSCEEEESSCCGG
T ss_pred --------C----cc------ccCc--CcCCCeEE--------EEeccCCcccccccccccccCCCcCCEEEEECCCCcc
Confidence 0 00 0011 11111333 22222211 2455678999999999
Q ss_pred cCCCCcccceeecchhh--hhhhccCcCCC
Q psy8249 204 LDLKYTIFGKVIDGLET--LDNLEKLPVNP 231 (232)
Q Consensus 204 ld~~~~~fg~V~~g~~v--~~~i~~~~~~~ 231 (232)
||+.|+|||+|+ ||+| |++|++++++.
T Consensus 148 LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~~ 176 (232)
T 3bkp_A 148 LNNAYTLFGKVT-GHTLYNLMKFNDLEVGK 176 (232)
T ss_dssp GTTTSCEEEEEC-GGGHHHHHHHTTSCBCG
T ss_pred cCCCccEEEEEE-eCchHHHHHHHcCCcCC
Confidence 999999999999 7766 89999999863
No 71
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.79 E-value=8.7e-20 Score=158.68 Aligned_cols=140 Identities=35% Similarity=0.549 Sum_probs=98.1
Q ss_pred eeEEeeCCCccccccceeccccCCCCcchhhhhhccC--------C---CCCCceeEEeecCcEEEcCCCCCCCCCCCcc
Q psy8249 48 GFIVQTGDPTHTGDIKIELFCEDCPKTCENFLALCAS--------D---YYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116 (232)
Q Consensus 48 ~f~iq~Gd~t~~G~i~i~l~~~~~P~~~~~F~~l~~~--------~---~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~ 116 (232)
.|+....+.++.|+|+++||++.+|+|++||++||++ + +|+|+.||||+++||||||| . ..+.
T Consensus 18 v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd---~-~~~~-- 91 (370)
T 1ihg_A 18 VFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGD---F-SNQN-- 91 (370)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECC---T-TTSS--
T ss_pred EEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCC---C-CCCC--
Confidence 4566566668899999999999999999999999997 5 69999999999999999985 1 0000
Q ss_pred CCCCCcccccccccccccceEEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeE
Q psy8249 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFI 196 (232)
Q Consensus 117 ~~~~~~~e~~~~l~~~~~g~v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i 196 (232)
| .|--+. .+..| .+. .....|..-|.| ++++... ..+...++|
T Consensus 92 -g---------------~g~~~~-------~~~~~----~~e-~~~~~~~~~g~l--------~ma~~~~-~~~~sqffi 134 (370)
T 1ihg_A 92 -G---------------TGGESI-------YGEKF----EDE-NFHYKHDKEGLL--------SMANAGS-NTNGSQFFI 134 (370)
T ss_dssp -S---------------SCCCBT-------TBSCB----CCC-CCCBCCCSTTEE--------EECCSST-TCBCSCEEE
T ss_pred -C---------------CCCCCC-------CCCCc----CCC-cCCcCCCCCeEE--------EEeeCCC-CCCCceEEE
Confidence 0 000000 00000 000 001112222333 3444442 355667999
Q ss_pred EEeeeeecCCCCcccceeecchhhhhhhccCcCC
Q psy8249 197 TYAAHAHLDLKYTIFGKVIDGLETLDNLEKLPVN 230 (232)
Q Consensus 197 ~I~~~~~ld~~~~~fg~V~~g~~v~~~i~~~~~~ 230 (232)
+...+++||+.|+|||+|++||+||++|++++++
T Consensus 135 ~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~ 168 (370)
T 1ihg_A 135 TTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVK 168 (370)
T ss_dssp ESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEE
T ss_pred eCCCCcccCCCceEEEEEecCHHHHHHHHcCCCC
Confidence 9999999999999999999999999999998765
No 72
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=99.79 E-value=5.2e-20 Score=144.48 Aligned_cols=131 Identities=37% Similarity=0.674 Sum_probs=91.9
Q ss_pred ccccccceeccccCCCCcchhhhhhccCCCCCCceeEEeecCcEEEcCCCCCCCCCCCccCCCCCcccccccccccccce
Q psy8249 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKKFEDEFKETLKHSERGI 136 (232)
Q Consensus 57 t~~G~i~i~l~~~~~P~~~~~F~~l~~~~~y~g~~~~rv~~~~~vq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~g~ 136 (232)
|+.|+++++||++.+|++++||++||+.++|+++.|||++++|++|||++.. .+. -+..+..+ .+
T Consensus 31 T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~---~g~--gg~si~g~---~~------- 95 (185)
T 2hq6_A 31 TTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTG---TGS--GGESIYGA---PF------- 95 (185)
T ss_dssp ETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTS---SSS--CCCCTTSS---CB-------
T ss_pred eCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCC---CCC--CCCcccCC---cc-------
Confidence 5789999999999999999999999999999999999999999999998741 110 00000000 00
Q ss_pred EEecccCCCcccceEEeeccCCCCCCCCccEEEEEeeccchhhhcccCCCCCCCCceeeEEEeeeeecCCCCcccceeec
Q psy8249 137 VSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFETLDNLEKLPVNPNHKPIFFITYAAHAHLDLKYTIFGKVID 216 (232)
Q Consensus 137 v~~~~~~~~~~~s~f~itl~~~~~ld~~~tvfG~VveG~dvl~~I~~~~~~~~~~P~~~i~I~~~~~ld~~~~~fg~V~~ 216 (232)
++ ++. +.| +|..-|.| ++++... ..+...++|+..++++||+.|++||+|+
T Consensus 96 -------~d----E~~------~~l--~h~~~G~l--------sMA~~g~-~s~gSQFFIt~~~~~~LDg~~tVFG~V~- 146 (185)
T 2hq6_A 96 -------KD----EFH------SRL--RFNRRGLV--------AMANAGS-HDNGSQFFFTLGRADELNNKHTIFGKVT- 146 (185)
T ss_dssp -------CC----CCB------TTB--CSCSSSEE--------EECCSST-TCBCSCEEEESSCCGGGTTTSCEEEEEC-
T ss_pred -------cc----ccc------cCc--ccCCCeEE--------EEccCCC-CCccceEEEECCCCCccCCCceEEEEEE-
Confidence 00 100 000 11112333 2333332 3455678999999999999999999999
Q ss_pred chhhh--hhhccCcCCC
Q psy8249 217 GLETL--DNLEKLPVNP 231 (232)
Q Consensus 217 g~~v~--~~i~~~~~~~ 231 (232)
|++|+ ++|+++++++
T Consensus 147 G~~v~~~~~i~~~~~~~ 163 (185)
T 2hq6_A 147 GDTVYNMLRLSEVDIDD 163 (185)
T ss_dssp GGGHHHHHHTTCSCBCT
T ss_pred eCeeehhhHHhhCCcCC
Confidence 89885 6899988864
No 73
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=71.93 E-value=2.7 Score=31.16 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=27.6
Q ss_pred CEEEEEeCCeeEEEEeecCCCchhHHhHHHhh
Q psy8249 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALC 32 (232)
Q Consensus 1 ~~v~~~t~~G~i~i~L~~~~~p~~~~nf~~l~ 32 (232)
|.+.|.-.-..++++|+.+.||+|++-|+++.
T Consensus 30 ~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 30 MRLRIRFESAECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp CCEEEEETTEEEEECCCTTSCHHHHHHHHHTC
T ss_pred eEEEEEECCEEEEEEEcCCCCHHHHHHHHHhC
Confidence 66777777778999999888999999999985
No 74
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=52.62 E-value=3.7 Score=19.91 Aligned_cols=17 Identities=24% Similarity=0.497 Sum_probs=14.1
Q ss_pred HHhHHHhhhcCccccee
Q psy8249 25 CENFLALCASDYYNGCI 41 (232)
Q Consensus 25 ~~nf~~l~~~~~y~~~~ 41 (232)
-+||..-.+.+||||..
T Consensus 3 wknfwsslrkgfydgea 19 (26)
T 2khf_A 3 WKNFWSSLRKGFYDGEA 19 (26)
T ss_dssp HHHHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHhhcccchh
Confidence 36999999999999753
No 75
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=48.34 E-value=11 Score=28.54 Aligned_cols=22 Identities=18% Similarity=0.181 Sum_probs=19.8
Q ss_pred eEEEEeecCCCchhHHhHHHhh
Q psy8249 11 DIKIELFCEDCPKTCENFLALC 32 (232)
Q Consensus 11 ~i~i~L~~~~~p~~~~nf~~l~ 32 (232)
.++.+|..+.||+||+-|+++.
T Consensus 34 ~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 34 TCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp EEEEEECTTTSHHHHHHHHHHC
T ss_pred EEEEEEccccChHHHHHHHHhC
Confidence 4789999999999999999975
No 76
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=27.64 E-value=50 Score=20.90 Aligned_cols=14 Identities=29% Similarity=0.349 Sum_probs=11.0
Q ss_pred EEEEEeCCeeEEEE
Q psy8249 2 SVSLHTDVGDIKIE 15 (232)
Q Consensus 2 ~v~~~t~~G~i~i~ 15 (232)
.|.++|++|.+.|+
T Consensus 22 ~i~L~T~~G~L~Ik 35 (71)
T 2ks0_A 22 EILLETIQGVLSIK 35 (71)
T ss_dssp EEEEEETTEEEEEE
T ss_pred EEEEEeCceEEEEE
Confidence 47788888888876
Done!