RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8249
(232 letters)
>d1xwna1 b.62.1.1 (A:1-166) Peptidyl-prolyl cis-trans isomerase-like
1, PPIL1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 166
Score = 154 bits (391), Expect = 2e-48
Identities = 67/137 (48%), Positives = 89/137 (64%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116
T G I +EL+ + PKTC+NF L YYNG FHR IK F++Q GDPT TG+GG SI
Sbjct: 18 TSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASI 77
Query: 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFE 176
+GK+FEDE LK + GI++MAN GP+TN SQFF+T A LD K+TIFG+V G
Sbjct: 78 YGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIG 137
Query: 177 TLDNLEKLPVNPNHKPI 193
++ + + N +P+
Sbjct: 138 MVNRVGMVETNSQDRPV 154
>d1zkca1 b.62.1.1 (A:280-457) Peptidyl-prolyl cis-trans
isomerase-like 2, Cyclophilin-60, PPI domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 147 bits (373), Expect = 1e-45
Identities = 75/138 (54%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116
T+ GD+ +EL C+ PKTCENF+ LC YY+G IFHR+I+ F++Q GDPT TG GG S
Sbjct: 7 TNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESY 66
Query: 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFE 176
WGK F+DEF+ L H+ RGI+SMAN+GPN+N SQFFIT+ + A+LD K+TIFG+V+ GF+
Sbjct: 67 WGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFD 126
Query: 177 TLDNLEKLPVNP-NHKPI 193
L +E + +P +P
Sbjct: 127 VLTAMENVESDPKTDRPK 144
>d2ok3a1 b.62.1.1 (A:1-159) Cyclophilin-like protein PPIL3B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 159
Score = 138 bits (347), Expect = 6e-42
Identities = 108/138 (78%), Positives = 120/138 (86%), Gaps = 1/138 (0%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116
T GDIKIE+FCE PKTCENFLALCAS+YYNGCIFHRNIKGF+VQTGDPT TG+GGNSI
Sbjct: 7 TDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSI 66
Query: 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFE 176
WGKKFEDE+ E LKH+ RG+VSMANNGPNTN SQFFITY HLD+KYT+FGKVIDG E
Sbjct: 67 WGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLE 126
Query: 177 TLDNLEKLPVNP-NHKPI 193
TLD LEKLPVN ++P+
Sbjct: 127 TLDELEKLPVNEKTYRPL 144
>d2cfea1 b.62.1.1 (A:1-162) Cyclophilin-like allergen Mal s 6
{Malassezia sympodialis [TaxId: 76777]}
Length = 162
Score = 130 bits (327), Expect = 7e-39
Identities = 65/138 (47%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASD---YYNGCIFHRNIKGFIVQTGDPT-HTGKGGNS 115
G IK +LF + PKT NF ALC + Y G FHR I F++Q GD T G GG S
Sbjct: 16 GTIKFKLFDDVVPKTAANFRALCTGEKGFGYAGSHFHRVIPDFMLQGGDFTAGNGTGGKS 75
Query: 116 IWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGF 175
I+G KF DE + LKH++ G++SMAN GPNTN SQFFIT + LD K+ +FG+VIDG
Sbjct: 76 IYGAKFADENFQ-LKHNKPGLLSMANAGPNTNGSQFFITTVVTSWLDGKHVVFGEVIDGM 134
Query: 176 ETLDNLEKLPVNPNHKPI 193
+ +E + + KP
Sbjct: 135 NVVKAIEAEG-SGSGKPR 151
>d2b71a1 b.62.1.1 (A:23-191) Cyclophilin-like protein PY00693
{Plasmodium yoelii [TaxId: 5861]}
Length = 169
Score = 129 bits (324), Expect = 3e-38
Identities = 70/137 (51%), Positives = 92/137 (67%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116
T+ GD ++EL+ PKTC NF LC +Y+ IFHR I F++Q GDPT TGKGG SI
Sbjct: 23 TNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSI 82
Query: 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFE 176
+G+ FEDE + LKH+ GI+SM+NNGPNTN+SQFFIT A HLD K+TIF +V
Sbjct: 83 YGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMT 142
Query: 177 TLDNLEKLPVNPNHKPI 193
++N+ + +KPI
Sbjct: 143 CIENIASVQTTATNKPI 159
>d1a33a_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Nematode (Brugia
malayi) [TaxId: 6279]}
Length = 174
Score = 121 bits (305), Expect = 2e-35
Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASD-----------YYNGCIFHRNIKGFIVQTGDPTH 108
G I +EL+ + P+TC NFL LC +Y G FHR IK F++Q GD T
Sbjct: 18 GRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTK 77
Query: 109 TGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIF 168
G D+ + +KH E +VSMAN GPNTN SQFFIT HL+ + +F
Sbjct: 78 GDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVF 137
Query: 169 GKVIDGFETLDNLEKLPVNPNHKPIFFIT 197
GKV+ G E + +E L N ++P+ +
Sbjct: 138 GKVVSGQEVVTKIEYLKTNSKNRPLADVV 166
>d2fu0a1 b.62.1.1 (A:5-159) Putative cyclophilin PFE0505w
{Plasmodium falciparum [TaxId: 5833]}
Length = 155
Score = 121 bits (303), Expect = 2e-35
Identities = 73/137 (53%), Positives = 92/137 (67%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116
T GDI I LF ++C KT +NF + YYN CIFHR IK F+VQTGDP+ G GG SI
Sbjct: 8 TTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESI 67
Query: 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFE 176
WG +FEDEF + L HS+ +VSMAN GPNTN SQFFIT LD K+T+FGKV G +
Sbjct: 68 WGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSK 127
Query: 177 TLDNLEKLPVNPNHKPI 193
+ ++EK+ + KP+
Sbjct: 128 IVLDIEKVRTDKRDKPL 144
>d1qnga_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Plasmodium
falciparum [TaxId: 5833]}
Length = 170
Score = 119 bits (298), Expect = 2e-34
Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASD---------YYNGCIFHRNIKGFIVQTGDP- 106
++ G I ELF + P+TCENF ALC + +Y IFHR I F+ Q GD
Sbjct: 15 SNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDIT 74
Query: 107 THTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYT 166
G GG SI+G+ F DE +KH + G++SMAN GPNTN+SQFFIT LD K+
Sbjct: 75 NGNGSGGESIYGRSFTDENFN-MKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHV 133
Query: 167 IFGKVIDGFETLDNLEKLPVNPNHKPI 193
+FGKVI+G + +EK +
Sbjct: 134 VFGKVIEGMNVVREMEKEGA-KSGYVK 159
>d1w74a_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 171
Score = 116 bits (290), Expect = 3e-33
Identities = 64/195 (32%), Positives = 92/195 (47%), Gaps = 40/195 (20%)
Query: 1 MSVSLHTDVGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTG 60
+ +LHT+ GDIKI LF PKT NF+ L
Sbjct: 4 ATATLHTNRGDIKIALFGNHAPKTVANFVGLA---------------------------- 35
Query: 61 DIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSIWGKK 120
+ +N + +Y+G +FHR I+GF++Q GDPT TG+GG
Sbjct: 36 -------QGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYK--- 85
Query: 121 FEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVID--GFETL 178
F DEF L+ + +++MAN GP TN SQFFIT HL+ ++TIFG+VID +
Sbjct: 86 FADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVV 145
Query: 179 DNLEKLPVNPNHKPI 193
+ + K + N +P
Sbjct: 146 EAISKTATDGNDRPT 160
>d1xo7a_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Trypanosoma cruzi
[TaxId: 5693]}
Length = 166
Score = 114 bits (287), Expect = 6e-33
Identities = 60/142 (42%), Positives = 80/142 (56%), Gaps = 6/142 (4%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASDY---YNGCIFHRNIKGFIVQTGDPT-HTGKGGNS 115
G + I LF D PKT ENF L + + Y G IFHR I+ F++Q GD T G GG S
Sbjct: 20 GRVVIGLFGNDVPKTVENFKQLASGENGFGYKGSIFHRVIRNFMIQGGDFTNFDGTGGKS 79
Query: 116 IWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGF 175
I+G +F+DE G VSMAN GPN+N SQFF+T A LD ++ +FGKV++G
Sbjct: 80 IYGTRFDDEN--LKIKHFVGAVSMANAGPNSNGSQFFVTTAPTPWLDGRHVVFGKVVEGM 137
Query: 176 ETLDNLEKLPVNPNHKPIFFIT 197
+ + +E N KP +
Sbjct: 138 DVVKKVENTKTGLNDKPKKAVK 159
>d2rmca_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Mouse (Mus
musculus), variant C [TaxId: 10090]}
Length = 182
Score = 115 bits (288), Expect = 9e-33
Identities = 68/152 (44%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASD---YYNGCIFHRNIKGFIVQTGDPT-HTGKGGNS 115
G I I LF PKT ENF+AL + Y G IFHR IK F++Q GD T G GG S
Sbjct: 22 GRIVIGLFGNVVPKTVENFVALATGEKGYGYKGSIFHRVIKDFMIQGGDFTARDGTGGMS 81
Query: 116 IWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGF 175
I+G+ F DE LKH G VSMAN GP+TN SQFFIT LD K+ +FGKV+DG
Sbjct: 82 IYGETFPDENF-KLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGM 140
Query: 176 ETLDNLEKLPVNPNHKPIFFITYAAHAHLDLK 207
+ ++E + + +P+ T +D+K
Sbjct: 141 TVVHSIELQATDGHDRPLTDCTIVNSGKIDVK 172
>d2c3ba1 b.62.1.1 (A:1-171) Cyclophilin (eukaryotic) {Aspergillus
fumigatus [TaxId: 5085]}
Length = 171
Score = 113 bits (283), Expect = 3e-32
Identities = 61/140 (43%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASDY---YNGCIFHRNIKGFIVQTGDP-THTGKG 112
T G I LF +D PKT +NF LC Y FHR I F++Q GD G G
Sbjct: 18 TKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTG 77
Query: 113 GNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVI 172
G SI+G KF DE + KH ++GI+SMAN GPNTN SQFFIT A + LD K+ +FG+V
Sbjct: 78 GRSIYGDKFADENF-SRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVA 136
Query: 173 D--GFETLDNLEKLPVNPNH 190
D + + +E L +
Sbjct: 137 DEKSYSVVKEIEALGSSSGS 156
>d1h0pa_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Caenorhabditis
elegans, isoform 5 [TaxId: 6239]}
Length = 182
Score = 113 bits (284), Expect = 3e-32
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 60 GDIKIELFCEDCPKTCENFLALC---ASDYYNGCIFHRNIKGFIVQTGDPTH-TGKGGNS 115
G I I LF + PKT NF+ L + Y G FHR I F++Q GD T G GG S
Sbjct: 21 GRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRS 80
Query: 116 IWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGF 175
I+G+KF D LKH G +SMAN G +TN SQFFIT LD ++ +FGK+++G
Sbjct: 81 IYGEKFAD-ENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGM 139
Query: 176 ETLDNLEKLPVNPNHKPI 193
+ + +E+ P +P
Sbjct: 140 DVVRKIEQTEKLPGDRPK 157
>d2igva1 b.62.1.1 (A:1-172) Cyclophilin (eukaryotic) {Caenorhabditis
elegans, isoform 3 [TaxId: 6239]}
Length = 172
Score = 112 bits (280), Expect = 9e-32
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 13/145 (8%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASD----------YYNGCIFHRNIKGFIVQTGDP-TH 108
G I +EL+ + PKT NF ALC + ++ G FHR I F++Q GD
Sbjct: 18 GRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRG 77
Query: 109 TGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIF 168
G GG SI+G+KF DE KH+ G++SMAN GPNTN SQFF+ LD K+ +F
Sbjct: 78 NGTGGESIYGEKFPDENF-KEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVF 136
Query: 169 GKVIDGFETLDNLEKLPVNPNHKPI 193
G+V++G + + +E + + KP+
Sbjct: 137 GRVVEGLDVVKAVESNG-SQSGKPV 160
>d1qoia_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Human (Homo
sapiens), U4/U6 snRNP-specific cyclophilin snucyp-20
[TaxId: 9606]}
Length = 173
Score = 109 bits (273), Expect = 1e-30
Identities = 60/147 (40%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASDY--------YNGCIFHRNIKGFIVQTGDPTHT-G 110
G +KIELF + PKT ENF C ++ Y G FHR IK F++Q GD + G
Sbjct: 21 GRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDG 80
Query: 111 KGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGK 170
G SI+ F DE + G++SMAN+GP+TN QFFIT + LD K+ +FGK
Sbjct: 81 TGVASIYRGPFADENFKLRHS-APGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGK 139
Query: 171 VIDGFETLDNLEKLPVNPNHKPIFFIT 197
+IDG + +E +P PN+KP +
Sbjct: 140 IIDGLLVMRKIENVPTGPNNKPKLPVV 166
>d1ihga2 b.62.1.1 (A:2-196) Cyclophilin 40 isomerase domain {Cow
(Bos taurus) [TaxId: 9913]}
Length = 195
Score = 109 bits (273), Expect = 2e-30
Identities = 67/150 (44%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASD-----------YYNGCIFHRNIKGFIVQTGD-PT 107
G I +ELF + PKT ENF ALC + ++ GC FHR IK F++Q GD
Sbjct: 29 GRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSN 88
Query: 108 HTGKGGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTI 167
G GG SI+G+KFEDE KH + G++SMAN G NTN SQFFIT HLD K+ +
Sbjct: 89 QNGTGGESIYGEKFEDENFH-YKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVV 147
Query: 168 FGKVIDGFETLDNLEKLPVNPNHKPIFFIT 197
FG+VI G LE + V KP
Sbjct: 148 FGQVIKGMGVAKILENVEVK-GEKPAKLCV 176
>d2a2na1 b.62.1.1 (A:483-646) Peptidylprolyl isomerase domain and WD
repeat-containing protein 1, PPWD1, C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 164
Score = 105 bits (263), Expect = 2e-29
Identities = 74/138 (53%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116
T GDI +LF +CPKT ENF + YYNG FHR IKGF++QTGDPT TG GG SI
Sbjct: 16 TSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESI 75
Query: 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGFE 176
WG +FEDEF TL+H +SMAN G NTN SQFFIT LD K+T+FG+V G E
Sbjct: 76 WGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGME 135
Query: 177 TLDNLEKLPVNP-NHKPI 193
+ + + VNP KP
Sbjct: 136 VVQRISNVKVNPKTDKPY 153
>d1lopa_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA
{Escherichia coli [TaxId: 562]}
Length = 164
Score = 104 bits (259), Expect = 1e-28
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116
T+ GDI I+ F + P+T +NFL C +YN IFHR I GF++Q G K
Sbjct: 6 TNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKA-- 63
Query: 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYA--------AHAHLDLKYTIF 168
+ ++E LK++ + P++ +QFFI + Y +F
Sbjct: 64 TKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVF 123
Query: 169 GKVIDGFETLDNLEKLPVNPN 189
+V+DG + +D ++ + +
Sbjct: 124 AEVVDGMDEVDKIKGVATGRS 144
>d2z6wa1 b.62.1.1 (A:2-165) Mitochondrial peptidyl-prolyl cis-trans
isomerase, cyclophilin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 104 bits (259), Expect = 1e-28
Identities = 59/138 (42%), Positives = 76/138 (55%), Gaps = 6/138 (4%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASDY---YNGCIFHRNIKGFIVQTGD-PTHTGKGGNS 115
G + +EL + PKT ENF ALC + Y G FHR I F+ Q GD H G GG S
Sbjct: 17 GRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKS 76
Query: 116 IWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGF 175
I+G +F D TLKH G++SMAN GPNTN SQFFI LD K+ +FG VI+G
Sbjct: 77 IYGSRFPD-ENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGM 135
Query: 176 ETLDNLEKLPVNPNHKPI 193
+ + +E + +
Sbjct: 136 DVVKKIESFGS-KSGRTS 152
>d1z81a1 b.62.1.1 (A:25-210) Cyclophilin (eukaryotic) {Plasmodium
yoelii [TaxId: 5861]}
Length = 186
Score = 101 bits (252), Expect = 2e-27
Identities = 57/149 (38%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASDY--------YNGCIFHRNIKGFIVQTGDPTHTGK 111
G K ELF PKT ENF C +Y Y IFHR IK F++Q GD +
Sbjct: 31 GKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNG 90
Query: 112 GGNSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKV 171
G+ + D+ +KH + G++SMAN+GPNTN QFFIT LD K +FG++
Sbjct: 91 SGSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRI 150
Query: 172 IDG--FETLDNLEKLPVNP-NHKPIFFIT 197
ID L +E + V P +KP I
Sbjct: 151 IDNDSLLLLKKIENVSVTPYIYKPKIPIN 179
>d2r99a1 b.62.1.1 (A:139-299) Mitochondrial peptidyl-prolyl
cis-trans isomerase, cyclophilin F {Human (Homo sapiens)
[TaxId: 9606]}
Length = 161
Score = 98.0 bits (243), Expect = 2e-26
Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 6/138 (4%)
Query: 60 GDIKIELFCEDCPKTCENFLALCASD---YYNGCIFHRNIKGFIVQTGDPT-HTGKGGNS 115
G I++ L + P T ENF LC + + G FHR I F+ Q GD T H G GG S
Sbjct: 16 GRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKS 75
Query: 116 IWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDLKYTIFGKVIDGF 175
I+GKKF+DE KH+ G++SMAN+GPNTN SQFF+T LD K+ +FG+V +G
Sbjct: 76 IYGKKFDDENFIL-KHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGL 134
Query: 176 ETLDNLEKLPVNPNHKPI 193
+ L +E + + KP
Sbjct: 135 DVLRQIEAQG-SKDGKPK 151
>d1v9ta_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA
{Escherichia coli [TaxId: 562]}
Length = 166
Score = 92.3 bits (228), Expect = 4e-24
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 57 THTGDIKIELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGKGGNSI 116
T G+I++EL + P + +NF+ S +YN FHR I GF++Q T +
Sbjct: 11 TSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQ--GGGFTEQMQQKK 68
Query: 117 WGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFITYAAHAHLDL-----KYTIFGKV 171
++E L+++ I ++ SQFFI A +A LD Y +FGKV
Sbjct: 69 PNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKV 128
Query: 172 IDGFETLDNLEKLPVNPN 189
+ G + D + ++P +
Sbjct: 129 VKGMDVADKISQVPTHDV 146
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia
coli [TaxId: 562]}
Length = 235
Score = 30.9 bits (69), Expect = 0.086
Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 3/94 (3%)
Query: 16 LFCEDCPKTCENFLA-LCASDYYNGCIFHRNIKGFIVQTGDPT--HTGDIKIELFCEDCP 72
E P LA L + + +NI + G+ H +++ C
Sbjct: 61 QQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSG 120
Query: 73 KTCENFLALCASDYYNGCIFHRNIKGFIVQTGDP 106
+ + + D + C F ++ +V G+
Sbjct: 121 QVLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEM 154
Score = 25.1 bits (54), Expect = 6.7
Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 14/71 (19%)
Query: 15 ELFCEDCPKTCENFLALCASDYYNGCIFHRNIKGFIVQTGDPTHTGDIKIELFCEDCPKT 74
++ C + + + D + C F ++ +V F E
Sbjct: 113 KVRCSQSGQVLDWTGDVTPEDKCHCCQFPAPLRPHVV--------------WFGEMPLGM 158
Query: 75 CENFLALCASD 85
E ++AL +D
Sbjct: 159 DEIYMALSMAD 169
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia
coli [TaxId: 562]}
Length = 71
Score = 24.8 bits (54), Expect = 3.4
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 11 DIKIELFCEDCPKTCENFLALCASDYY 37
I+++ C DC + + A A DY+
Sbjct: 27 FIEMKALCPDCHQPLQVLKACGAVDYF 53
Score = 24.8 bits (54), Expect = 3.4
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 61 DIKIELFCEDCPKTCENFLALCASDYY 87
I+++ C DC + + A A DY+
Sbjct: 27 FIEMKALCPDCHQPLQVLKACGAVDYF 53
>d1i3ja_ d.285.1.1 (A:) DNA-binding domain of intron endonuclease
I-TevI {Bacteriophage T4 [TaxId: 10665]}
Length = 96
Score = 24.8 bits (54), Expect = 4.9
Identities = 9/40 (22%), Positives = 12/40 (30%), Gaps = 7/40 (17%)
Query: 114 NSIWGKKFEDEFKETLKHSERGIVSMANNGPNTNASQFFI 153
NS + K D K K SE +N +
Sbjct: 27 NSFFNHKHSDITKS--KISE-----KMKGKKPSNIKKISC 59
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 25.6 bits (55), Expect = 5.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 117 WGKKFEDEFKETLKHSERGIVSM 139
WG + D+F KH++ GI +
Sbjct: 3 WGTELWDQFDNLEKHTQWGIDIL 25
>d1rc9a2 g.19.1.2 (A:165-221) Cysteine-rich secretory protein
(SteCRISP) {Chinese green tree viper (Trimeresurus
stejnegeri) [TaxId: 39682]}
Length = 57
Score = 23.3 bits (50), Expect = 8.2
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 18 CEDCPKTCENFLALCASDYYN 38
C DCP C+N L N
Sbjct: 3 CGDCPSDCDNGLCTNPCTREN 23
Score = 23.3 bits (50), Expect = 8.2
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 68 CEDCPKTCENFLALCASDYYN 88
C DCP C+N L N
Sbjct: 3 CGDCPSDCDNGLCTNPCTREN 23
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.141 0.448
Gapped
Lambda K H
0.267 0.0476 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 942,817
Number of extensions: 45892
Number of successful extensions: 252
Number of sequences better than 10.0: 1
Number of HSP's gapped: 221
Number of HSP's successfully gapped: 75
Length of query: 232
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 150
Effective length of database: 1,281,736
Effective search space: 192260400
Effective search space used: 192260400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.0 bits)