RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8250
(212 letters)
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 80.6 bits (199), Expect = 3e-19
Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 12/178 (6%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEV-EKNLMVKVSGFVPQHDL 80
+ G L ++GPSG GKTT L I+ + +G+I +V + V Q
Sbjct: 30 KDGEFLVLLGPSGCGKTTTLRMIAGLEEPT-EGRIYFGDRDVTYLPPKDRNISMVFQSYA 88
Query: 81 TVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRV 140
+TV+E++ ++ + E + V + L + + N LSGG+R+RV
Sbjct: 89 VWPHMTVYENIAFPLKI---KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRV 145
Query: 141 ALAVQTIIVQSGFVPQHDLT-VDTLTVHEHMTLMARLKMDRNL------HHVERARTV 191
A+A ++ + L+ +D + +L+ + H A T+
Sbjct: 146 AVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTM 203
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 73.5 bits (180), Expect = 1e-16
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 12/141 (8%)
Query: 8 FGDTNYKESLSGI---AESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVE 64
G KE L GI E G + ++GP+GAGKTT L IS I+ G + + G V
Sbjct: 12 IGK---KEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPS-SGIVTVFGKNVV 67
Query: 65 KNL--MVKVSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLL 122
+ + K+ ++P+ + E++ +A E V+ + GL
Sbjct: 68 EEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGF---YASSSSEIEEMVERATEIAGLG 124
Query: 123 KCKNSVLNVLSGGERKRVALA 143
+ ++ S G +++ +A
Sbjct: 125 EKIKDRVSTYSKGMVRKLLIA 145
Score = 27.3 bits (60), Expect = 1.2
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 152 GFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGL 200
++P+ + E++ +A E V+ + GL
Sbjct: 78 SYLPEEAGAYRNMQGIEYLRFVAGF---YASSSSEIEEMVERATEIAGL 123
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 72.6 bits (178), Expect = 3e-16
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEV------EKNLMVKVSGFV 75
+G + ++G SGAGK+TL+ C++ + +G +L++G E+ E + G +
Sbjct: 29 PAGQIYGVIGASGAGKSTLIRCVNLLERPT-EGSVLVDGQELTTLSESELTKARRQIGMI 87
Query: 76 PQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGG 135
QH + + TV ++ L L N E R V LL +GL +S + LSGG
Sbjct: 88 FQHFNLLSSRTVFGNVALPLEL---DNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGG 144
Query: 136 ERKRVALAVQTIIVQSGFV-PQHDLTVDTLTVHEHMTLMARLKMDRNL------HHVERA 188
+++RVA+A + + +D T + L+ + L H ++
Sbjct: 145 QKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVV 204
Query: 189 RTV 191
+ +
Sbjct: 205 KRI 207
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 69.2 bits (169), Expect = 2e-15
Identities = 36/162 (22%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLT 81
E G+++ GP+G GKTTLL IS ++ G+I+ NG+ + K + F+P+ +
Sbjct: 25 EKGNVVNFHGPNGIGKTTLLKTISTYLKPL-KGEIIYNGVPITK--VKGKIFFLPEEIIV 81
Query: 82 VDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRVA 141
++V +++ +A L + + L+ + +L K + LS G +RV
Sbjct: 82 PRKISVEDYLKAVASLYGVK-----VNKNEIMDALESVEVLDLKKKL-GELSQGTIRRVQ 135
Query: 142 LAVQTIIVQSGFVPQHDLT-VDTLTVHEHMTLMARLKMDRNL 182
LA ++ +V + +D + H+ + + + ++ +
Sbjct: 136 LASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGI 177
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 70.0 bits (171), Expect = 3e-15
Identities = 31/172 (18%), Positives = 67/172 (38%), Gaps = 18/172 (10%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKV----SGFVPQ 77
G + I+GP+G+GK+TL+ I+ ++ D +G++ ++ ++ Q
Sbjct: 28 NKGDVTLIIGPNGSGKSTLINVITGFLKAD-EGRVYFENKDITNKEPAELYHYGIVRTFQ 86
Query: 78 HDLTVDTLTVHEHMTLMARLKMDRNLHHV----------ERARTVDALLKELGLLKCKNS 127
+ +TV E++ + + L+ + E +L+ L L +
Sbjct: 87 TPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDR 146
Query: 128 VLNVLSGGERKRVALAVQTIIVQSGFVPQHDLT--VDTLTVHEHMTLMARLK 177
LSGG+ K V + + ++ + + V H+ + LK
Sbjct: 147 KAGELSGGQMKLVEIG-RALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELK 197
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 69.1 bits (169), Expect = 4e-15
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEK-------NLMVKVSGF 74
+ G ++IMGPSG+GK+T+L I + +G++ ++ ++ + GF
Sbjct: 29 KEGEFVSIMGPSGSGKSTMLNIIGCLDKPT-EGEVYIDNIKTNDLDDDELTKIRRDKIGF 87
Query: 75 VPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLL-KCKNSVLNVLS 133
V Q + LT E++ L K + ER + LK L + N N LS
Sbjct: 88 VFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLS 147
Query: 134 GGERKRVALA 143
GG+++RVA+A
Sbjct: 148 GGQQQRVAIA 157
Score = 24.4 bits (53), Expect = 9.5
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 152 GFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLK 202
GFV Q + LT E++ L K + ER + LK L +
Sbjct: 86 GFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEE 136
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 67.3 bits (164), Expect = 2e-14
Identities = 39/170 (22%), Positives = 63/170 (37%), Gaps = 21/170 (12%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEK---NLMVKVSGFVPQH 78
+G +L ++GP+GAGK+TLLA ++ G G I G +E + ++ Q
Sbjct: 23 RAGEILHLVGPNGAGKSTLLARMAGMTSG--KGSIQFAGQPLEAWSATKLALHRAYLSQQ 80
Query: 79 DLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERK 138
V ++TL K R ++ + L L N LSGGE +
Sbjct: 81 QTPPFATPVWHYLTLHQHDK--------TRTELLNDVAGALALDDKLGRSTNQLSGGEWQ 132
Query: 139 RVALAVQTIIVQSGFVPQHDLTV--------DTLTVHEHMTLMARLKMDR 180
RV LA + + P L + D +++ L
Sbjct: 133 RVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQG 182
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 66.5 bits (162), Expect = 4e-14
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
Query: 8 FGDTNYKESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEV-EKN 66
+G+ + ++ G + +GPSG GK+TLL I+ G + + + +
Sbjct: 10 WGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETIT-SGDLFIGEKRMNDTP 68
Query: 67 LMVKVSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKN 126
+ G V Q L+V E+M+ +L + V+ + + L L +
Sbjct: 69 PAERGVGMVFQSYALYPHLSVAENMSFGLKL---AGAKKEVINQRVNQVAEVLQLAHLLD 125
Query: 127 SVLNVLSGGERKRVALA 143
LSGG+R+RVA+
Sbjct: 126 RKPKALSGGQRQRVAIG 142
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 66.2 bits (161), Expect = 4e-14
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 15/178 (8%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVK-VSGFVPQHDL 80
ESG I+GP+GAGKT L I+ D G+ILL+G +V K FV Q+
Sbjct: 24 ESGEYFVILGPTGAGKTLFLELIAGFHVPD-SGRILLDGKDVTDLSPEKHDIAFVYQNYS 82
Query: 81 TVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRV 140
+ V +++ + ++ + V ++L + + LSGGE++RV
Sbjct: 83 LFPHMNVKKNLE------FGMRMKKIKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRV 136
Query: 141 ALAVQTIIVQSGFVP-QHDLTVDTLTVHEHMTLMARLKMDRNL------HHVERARTV 191
ALA + + + +D T +++ L L H AR +
Sbjct: 137 ALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIM 194
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 66.1 bits (161), Expect = 6e-14
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 8 FGDTNYKESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEV---- 63
FG+ +S + G + ++GPSG GKTT L I+ + GQI + V
Sbjct: 13 FGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPS-RGQIYIGDKLVADPE 71
Query: 64 ---EKNLMVKVSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELG 120
+ V Q +TV++++ +L R + E + V + + LG
Sbjct: 72 KGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKL---RKVPRQEIDQRVREVAELLG 128
Query: 121 LLKCKNSVLNVLSGGERKRVALA 143
L + N LSGG+R+RVAL
Sbjct: 129 LTELLNRKPRELSGGQRQRVALG 151
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 64.9 bits (158), Expect = 2e-13
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 16/136 (11%)
Query: 12 NYKESLSGI---AESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLM 68
L I E G +LAI G +G+GKT+LL I ++ +G I +G
Sbjct: 47 VGNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEAS-EGIIKHSG-------- 97
Query: 69 VKVSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLK-ELGLLKCKNS 127
+V F Q + T+ E++ R V+ + + K
Sbjct: 98 -RV-SFCSQFSWIMPG-TIKENIIFGVSYDEYRYKSVVKACQLQQDITKFAEQDNTVLGE 154
Query: 128 VLNVLSGGERKRVALA 143
LSGG+R R++LA
Sbjct: 155 GGVTLSGGQRARISLA 170
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 64.3 bits (156), Expect = 3e-13
Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 11/171 (6%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKN------LMVKVSGFV 75
E+G I+GPSGAGKTT + I+ G++ + V N + G V
Sbjct: 29 ENGERFGILGPSGAGKTTFMRIIAGLDVPS-TGELYFDDRLVASNGKLIVPPEDRKIGMV 87
Query: 76 PQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGG 135
Q LT E++ + E + V+ + K L + N LSG
Sbjct: 88 FQTWALYPNLTAFENIAFPLTNMK---MSKEEIRKRVEEVAKILDIHHVLNHFPRELSGA 144
Query: 136 ERKRVALAVQTIIVQSGFVP-QHDLTVDTLTVHEHMTLMARLKMDRNLHHV 185
+++RVALA + S + + +D L+ ++ + +
Sbjct: 145 QQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLL 195
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 64.1 bits (156), Expect = 4e-13
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVS--------- 72
+G +++I+G SG+GK+T L CI+ ++ +G I++NG +
Sbjct: 26 RAGDVISIIGSSGSGKSTFLRCIN-FLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQL 84
Query: 73 -------GFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLL-KC 124
V QH +TV E+ +M L + L ++G+ +
Sbjct: 85 RLLRTRLTMVFQHFNLWSHMTVLEN--VMEAPIQVLGLSKHDARERALKYLAKVGIDERA 142
Query: 125 KNSVLNVLSGGERKRVALA 143
+ LSGG+++RV++A
Sbjct: 143 QGKYPVHLSGGQQQRVSIA 161
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 63.9 bits (155), Expect = 4e-13
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVS-GFVPQHDLTV 82
++GP+GAGK+ L I+ ++ D G++ LNG ++ + GFVPQ
Sbjct: 24 RDYCVLLGPTGAGKSVFLELIAGIVKPD-RGEVRLNGADITPLPPERRGIGFVPQDYALF 82
Query: 83 DTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRVAL 142
L+V+ ++ RN+ VER R V + ++LG+ + LSGGER+RVAL
Sbjct: 83 PHLSVYRNIAY-----GLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVAL 137
Query: 143 AVQTIIVQSGFVP-QHDLTVDTLTVHEHMTLMARLKMDRN------LHHVERARTV 191
A +I + + VD T M + ++ + + H + A +
Sbjct: 138 ARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAML 193
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 63.8 bits (155), Expect = 4e-13
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 12/181 (6%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEK---NLMVKVSGFVPQH 78
+ G ++ I+G SG+GK+TL I QR +GQ+L++G ++ N + + G V Q
Sbjct: 27 KQGEVIGIVGRSGSGKSTLTKLI-QRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQD 85
Query: 79 DLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDAL-LKELGLLKCKNSVLNVLSGGER 137
++ ++ + + +++ ++ + A D + G LSGG+R
Sbjct: 86 NVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQR 145
Query: 138 KRVALAVQTIIVQSGFVPQHDLT--VDTLTVHEHMTLMARLKMDRNL----HHVERARTV 191
+R+A+A + ++ + + T +D + H M M ++ R + H + +
Sbjct: 146 QRIAIA-RALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNA 204
Query: 192 D 192
D
Sbjct: 205 D 205
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 63.7 bits (155), Expect = 5e-13
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEK---NLMVKVSGFVPQH 78
E G +A +G SG GK+TL+ I R GQIL++G ++ + G V Q
Sbjct: 42 EKGETVAFVGMSGGGKSTLINLIP-RFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQD 100
Query: 79 DLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKEL--GLLKCKNSVLNVLSGGE 136
++ + + TV E++ L D + + + L G LSGG+
Sbjct: 101 NI-LFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQ 159
Query: 137 RKRVALA 143
++R+++A
Sbjct: 160 KQRLSIA 166
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 63.4 bits (154), Expect = 5e-13
Identities = 33/163 (20%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKN----LMVKVSGFVPQ 77
G ++ ++G +GAGKTT L+ I+ ++ G+I+ NG ++ + VP+
Sbjct: 30 PRGQIVTLIGANGAGKTTTLSAIAGLVRAQ-KGKIIFNGQDITNKPAHVINRMGIALVPE 88
Query: 78 HDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCK-NSVLNVLSGGE 136
LTV+E++ + A + D+ R ++ + LK + + LSGGE
Sbjct: 89 GRRIFPELTVYENLMMGAYNRKDKE----GIKRDLEWIFSLFPRLKERLKQLGGTLSGGE 144
Query: 137 RKRVALAVQTIIVQSGFVPQHDLT--VDTLTVHEHMTLMARLK 177
++ +A+ + ++ + + + + + + V E ++ ++
Sbjct: 145 QQMLAIG-RALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKIN 186
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 61.8 bits (150), Expect = 2e-12
Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 19/186 (10%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEV---EKNLMVKVSGFVPQH 78
G + A++GP+G+GK+T+ A + + GQ+LL+G + E + + V Q
Sbjct: 38 RPGEVTALVGPNGSGKSTVAALLQ-NLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQE 96
Query: 79 DLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNV----LSG 134
++ E++ K A A GL + ++ ++ LSG
Sbjct: 97 PQVFG-RSLQENIAYGLTQKPTME-EITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSG 154
Query: 135 GERKRVALAVQTIIVQSGFVPQHDLT--VDTLTVHEHMTLMARLKMDRNL------HHVE 186
G+R+ VAL + +I + + D T +D + + L+ + H+
Sbjct: 155 GQRQAVAL-ARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLS 213
Query: 187 RARTVD 192
D
Sbjct: 214 LVEQAD 219
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 61.4 bits (149), Expect = 3e-12
Identities = 35/182 (19%), Positives = 74/182 (40%), Gaps = 13/182 (7%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKV---SGFVPQH 78
+G +A++G SG+GK+T+ + I R +G IL++G ++ + + + V Q+
Sbjct: 39 PAGKTVALVGRSGSGKSTIASLI-TRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQN 97
Query: 79 DLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKEL--GLLKCKNSVLNVLSGGE 136
+ + + R + ++ GL +LSGG+
Sbjct: 98 VHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQ 157
Query: 137 RKRVALAVQTIIVQSGFVPQHDLT--VDTLTVHEHMTLMARLKMDRNL----HHVERART 190
R+R+A+A + ++ S + + T +DT + + L+ +R H +
Sbjct: 158 RQRIAIA-RALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQ 216
Query: 191 VD 192
D
Sbjct: 217 AD 218
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 57.6 bits (139), Expect = 7e-11
Identities = 39/202 (19%), Positives = 80/202 (39%), Gaps = 34/202 (16%)
Query: 14 KESLSGI---AESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVK 70
++ L I A+ S++A GPSG GK+T+ + + + Q G+I ++G ++
Sbjct: 15 EQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPT-AGEITIDGQPIDN----- 68
Query: 71 VSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLN 130
+ + V + +MA + + +E T + L + L L ++ V N
Sbjct: 69 ----ISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVEN 124
Query: 131 V--------------LSGGERKRVALAVQTIIVQSGFVPQHDLT--VDTLTVHEHMTLMA 174
+ +SGG+R+R+A+A + + + + T +D+ + +
Sbjct: 125 MPDQLNTEVGERGVKISGGQRQRLAIA-RAFLRNPKILMLDEATASLDSESESMVQKALD 183
Query: 175 RLKMDRNL----HHVERARTVD 192
L R H + D
Sbjct: 184 SLMKGRTTLVIAHRLSTIVDAD 205
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 37.7 bits (86), Expect = 3e-04
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEK 65
+ I G G GKTTL+ I +R+ + +
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKR-AIGFWTEEVRDPE 40
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 36.1 bits (82), Expect = 0.001
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQR 47
G ++ + GPS GK+T++ C+ +R
Sbjct: 2 GRVVVLSGPSAVGKSTVVRCLRER 25
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 36.0 bits (82), Expect = 0.001
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQR 47
G+L + PSGAGK++L+ + +
Sbjct: 2 GTLYIVSAPSGAGKSSLIQALLKT 25
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 34.9 bits (79), Expect = 0.004
Identities = 27/195 (13%), Positives = 63/195 (32%), Gaps = 16/195 (8%)
Query: 17 LSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVP 76
G S++ G +G GKT L++ + + + IL E L+
Sbjct: 19 CGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNA----- 73
Query: 77 QHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGE 136
+ +D + L + + + + + + + + L+ L+ G
Sbjct: 74 -YSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGV 132
Query: 137 RKRVALAVQTIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHH-------VERAR 189
Q +I +G+ Q ++T T + A D ++ ++
Sbjct: 133 --SNNAFRQFVIGVTGYAKQEEITG-LFTNTSDQFMGAHSITDSHISTITDTIILLQYVE 189
Query: 190 TVDALLKELGLLKCR 204
+ + + + K R
Sbjct: 190 IRGEMSRAINVFKMR 204
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 34.5 bits (78), Expect = 0.005
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 26 LLAIMGPSGAGKTTLLACISQR 47
+ + GPSGAGK+TLL + Q
Sbjct: 2 PVVLSGPSGAGKSTLLKKLFQE 23
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 34.7 bits (78), Expect = 0.006
Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 6/166 (3%)
Query: 17 LSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVP 76
L G ES S+ G G+GKT ++ +Q + + K
Sbjct: 27 LGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDT 86
Query: 77 QHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGE 136
+ + + + + V RA D + ++ + G
Sbjct: 87 EGTFRPERIMQM-AEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIED-----LIQEGNN 140
Query: 137 RKRVALAVQTIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNL 182
K V + T ++ + + L + HM + +L N
Sbjct: 141 IKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNC 186
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 34.1 bits (77), Expect = 0.006
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 26 LLAIMGPSGAGKTTLLACISQRI 48
+ I GPSG GK+TLL +
Sbjct: 3 PIVISGPSGTGKSTLLKKLFAEY 25
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 33.4 bits (75), Expect = 0.009
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 23 SGSLLAIMGPSGAGKTTLLACISQR 47
G++L + G G+GK+T+ ++
Sbjct: 3 GGNILLLSGHPGSGKSTIAEALANL 27
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus
thermophilus [TaxId: 274]}
Length = 318
Score = 33.8 bits (77), Expect = 0.012
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 20 IAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGL-EVEKNLMVKVSGFVPQH 78
+ + G + G SG GKTTL + + GD + +G+ E KV P+H
Sbjct: 10 VGKEGDVAVFFGLSGTGKTTLSTDPERPLIGDDEHGWSEDGVFNFEGGCYAKVIRLSPEH 69
Query: 79 D 79
+
Sbjct: 70 E 70
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 32.9 bits (74), Expect = 0.017
Identities = 4/22 (18%), Positives = 10/22 (45%)
Query: 26 LLAIMGPSGAGKTTLLACISQR 47
L ++G G G+ + + +
Sbjct: 5 TLVLLGAHGVGRRHIKNTLITK 26
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho,
ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 33.1 bits (75), Expect = 0.018
Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 20/189 (10%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGL------------EVEKNLMVKVSGF 74
I+ P AGKT LL I+Q I + +L+ L + K +V +
Sbjct: 46 GLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFD 105
Query: 75 VPQHD---LTVDTLTVHEHMTLMAR---LKMDRNLHHVERARTVDALLKELGLLKCKNSV 128
P + + + + + + +D TV ++ +
Sbjct: 106 EPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANA 165
Query: 129 LNVLSG--GERKRVALAVQTIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVE 186
L+ G + V I+ + + + + T L + R +
Sbjct: 166 LHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKR 225
Query: 187 RARTVDALL 195
+D
Sbjct: 226 VFPAIDYNR 234
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 32.6 bits (73), Expect = 0.019
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Query: 27 LAIMGPSGAGKTTLLACISQRI--QGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDT 84
LA SG GKTTLL + + +G G I +++ + K S + +
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 85 LTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKC 124
+ + LM + L A +D +L L++
Sbjct: 65 VASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEG 104
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 32.8 bits (73), Expect = 0.020
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 28 AIMGPSGAGKTTLLACISQRIQGDVDG 54
I+G +G+GK++LL I + +
Sbjct: 27 LIIGQNGSGKSSLLDAILVGLYWPLRI 53
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 32.3 bits (72), Expect = 0.021
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQGDV 52
L I GP+G GK+T ++ ++
Sbjct: 4 LYIITGPAGVGKSTTCKRLAAQLDNSA 30
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 32.5 bits (72), Expect = 0.025
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 17 LSGIAESGSLLAIMGPSGAGKTTLLACISQRIQ 49
L G E+GS+ + G GKT + ++ Q
Sbjct: 16 LQGGIETGSITEMFGEFRTGKTQICHTLAVTCQ 48
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Escherichia coli [TaxId: 562]}
Length = 313
Score = 32.3 bits (73), Expect = 0.032
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Query: 20 IAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGL-EVEKNLMVKVSGFVPQH 78
+ E G + G SG GKTTL +R+ GD + +G+ E K +
Sbjct: 10 VGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEA 69
Query: 79 DLTVDTLTVH----EHMTLMARLKMDRN 102
+ + E++T+ +D +
Sbjct: 70 EPEIYNAIRRDALLENVTVREDGTIDFD 97
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 31.9 bits (71), Expect = 0.033
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 23 SGSLLAIMGPSGAGKTTLLACISQR 47
+ ++ + G S AGK+ ++ C+
Sbjct: 2 TTRMIILNGGSSAGKSGIVRCLQSV 26
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 31.5 bits (70), Expect = 0.040
Identities = 8/83 (9%), Positives = 26/83 (31%), Gaps = 5/83 (6%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNG-----LEVEKNLMVKVSGFVPQHDL 80
++ + G G G TT ++ + +++ ++ +V + + D
Sbjct: 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMDP 62
Query: 81 TVDTLTVHEHMTLMARLKMDRNL 103
+A + + +
Sbjct: 63 ETQKRIQKMAGRKIAEMAKESPV 85
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 31.5 bits (70), Expect = 0.045
Identities = 13/93 (13%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTLT 86
+ I GP +GKT+LL ++ V + P H L+
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADYDGSGVTLV-DFPGHVKLRYKLS 64
Query: 87 VHEHMTLMARLKMDRNLHHVERARTVDALLKEL 119
+ + + + + + L
Sbjct: 65 DYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFL 97
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 251
Score = 31.6 bits (70), Expect = 0.048
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 17 LSGIAESGSLLAIMGPSGAGKTTLLACISQRIQ 49
L G E+GS+ + G GK+ L ++ Q
Sbjct: 27 LGGGVETGSITELFGEFRTGKSQLCHTLAVTCQ 59
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 31.6 bits (70), Expect = 0.050
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 17 LSGIAESGSLLAIMGPSGAGKTTLLACISQRIQ 49
L G E+ ++ + G G+GKT L ++ +Q
Sbjct: 29 LGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQ 61
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania
major [TaxId: 5664]}
Length = 174
Score = 31.1 bits (69), Expect = 0.059
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQG 50
+ I G G GKT++ I+ + G
Sbjct: 8 ILITGTPGTGKTSMAEMIAAELDG 31
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 31.2 bits (69), Expect = 0.070
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
I GPSGAGK TL +++
Sbjct: 7 TIDGPSGAGKGTLCKAMAEA 26
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 31.1 bits (69), Expect = 0.070
Identities = 22/196 (11%), Positives = 55/196 (28%), Gaps = 9/196 (4%)
Query: 17 LSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEV-EKNLMVKVSGFV 75
G G + G SG GKT + D + E ++++ F
Sbjct: 19 SHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFG 78
Query: 76 PQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGG 135
VD + + + + + ++ + + + + ++ ++
Sbjct: 79 WDLAKLVDEGKLFILDASPDPEGQEV-VGGFDLSALIERINYAIQKYRARRVSIDSVTSV 137
Query: 136 ERKRVALAVQTIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHV-------ERA 188
++ A +V + + T+ E + + V
Sbjct: 138 FQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNV 197
Query: 189 RTVDALLKELGLLKCR 204
+ + L +LK R
Sbjct: 198 LEGERRRRTLEILKLR 213
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 30.8 bits (68), Expect = 0.079
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 28 AIMGPSGAGKTTLLACISQRIQG 50
AI+G +GK+ L+ ++
Sbjct: 11 AILGGESSGKSVLVNKLAAVFNT 33
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 30.9 bits (68), Expect = 0.082
Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 7/101 (6%)
Query: 14 KESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSG 73
+++ SG +AI+G GK+TLL + + + + L
Sbjct: 1 EKTYSGF------VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQ 54
Query: 74 FVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDA 114
V + M + + VD
Sbjct: 55 IVFVDT-PGLHKPMDALGEFMDQEVYEALADVNAVVWVVDL 94
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 30.9 bits (68), Expect = 0.084
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQGDVDGQI 56
+L I G S +GKTTL +SQ ++
Sbjct: 24 VLGIDGLSRSGKTTLANQLSQTLREQGISVC 54
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 30.8 bits (68), Expect = 0.088
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 17 LSGIAESGSLLAIMGPSGAGKTTLLACISQRIQ 49
L G ES ++ G GKT L + Q
Sbjct: 30 LGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQ 62
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae
[TaxId: 1313]}
Length = 223
Score = 30.7 bits (68), Expect = 0.089
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
AI GP+ +GK+T+ I++
Sbjct: 7 AIDGPASSGKSTVAKIIAKD 26
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 30.9 bits (68), Expect = 0.091
Identities = 3/30 (10%), Positives = 11/30 (36%)
Query: 23 SGSLLAIMGPSGAGKTTLLACISQRIQGDV 52
+ ++G GK++++ +
Sbjct: 28 RAPITLVLGLRRTGKSSIIKIGINELNLPY 57
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 30.6 bits (68), Expect = 0.096
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQGDV 52
G L+ I G GKTT + +++Q +
Sbjct: 3 GKLILIEGLDRTGKTTQCNILYKKLQPNC 31
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 30.7 bits (68), Expect = 0.097
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 29 IMGPSGAGKTTLLACISQRIQGDVDGQIL 57
+G +G+GKTTL + ++ + +
Sbjct: 5 FVGTAGSGKTTLTGEFGRYLEDNYKVAYV 33
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 30.5 bits (67), Expect = 0.10
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
AI+G GK+TLL + +
Sbjct: 9 AIVGRPNVGKSTLLNKLLGQ 28
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 31.0 bits (69), Expect = 0.10
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 4/94 (4%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTLT 86
L + G GAGK+T L + ++ + ++ G + ++ L
Sbjct: 57 LGVTGTPGAGKSTFLEAFGMLLI-REGLKVAVIAVDPSS---PVTGGSILGDKTRMNDLA 112
Query: 87 VHEHMTLMARLKMDRNLHHVERARTVDALLKELG 120
E + +RAR + L + G
Sbjct: 113 RAEAAFIRPVPSSGHLGGASQRARELMLLCEAAG 146
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 30.3 bits (67), Expect = 0.11
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQGDV 52
L+ + G + +GK+++ A I Q + +
Sbjct: 4 LIGVSGGTASGKSSVCAKIVQLLGQNE 30
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 30.4 bits (67), Expect = 0.11
Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 3 TFHPLFGDTNYKESLSGIAESGSLLAIM--GPSGAGKTTLLACISQRIQGD 51
+ + L +S +L ++ GP G GKT+ + +++ + G
Sbjct: 10 NLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGP 60
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 30.4 bits (68), Expect = 0.11
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 13/94 (13%)
Query: 28 AIMGPSGAGKTTLLACI------SQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLT 81
I AGKTT I +I +G ++ +E E+ + ++ V
Sbjct: 10 GIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWK 69
Query: 82 VDTLTVHEHMTLMARLKMDRNLHHVERA-RTVDA 114
+ ++ VER+ R +D
Sbjct: 70 ------DHRINIIDAPGHVDFTIEVERSMRVLDG 97
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 252
Score = 30.5 bits (67), Expect = 0.12
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 3 TFHPLFGDTNYKESLSGIAESGSL---LAIMGPSGAGKTTLLACISQRIQGD 51
+ + L + L +++ L + GP+G GK T + + I G
Sbjct: 9 SLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 60
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 30.0 bits (66), Expect = 0.12
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRI 48
+ +MG SG+GK+ + + ++ ++
Sbjct: 4 HDHHIYVLMGVSGSGKSAVASEVAHQL 30
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 30.6 bits (67), Expect = 0.12
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 28 AIMGPSGAGKTTLLACIS 45
I+G +G+GK++LL I
Sbjct: 27 LIIGQNGSGKSSLLDAIL 44
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 30.4 bits (67), Expect = 0.13
Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 21/170 (12%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVD 83
G++ A++ P GAGK+ L ++ +I G D + +
Sbjct: 29 GTVGALVSPGGAGKSMLALQLAAQIAGGPD----------------LLEVGELPTGPVIY 72
Query: 84 TLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRVALA 143
+ RL E + V L L+ +++ KR A
Sbjct: 73 LPAEDPPTAIHHRLHALGAHLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEG 132
Query: 144 VQTIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRN-----LHHVERA 188
+ +++ + + + + + + M + D LHH +
Sbjct: 133 RRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHASKG 182
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 30.1 bits (66), Expect = 0.14
Identities = 4/26 (15%), Positives = 10/26 (38%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQ 49
G + + G +GK + + +
Sbjct: 6 GFTIFLTGYMNSGKDAIARALQVTLN 31
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 29.8 bits (66), Expect = 0.15
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGD 51
++G +GKTTL+ +
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAAAVRE 28
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 29.7 bits (65), Expect = 0.16
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGDVD 53
+ I G AGK++LL ++ R V
Sbjct: 4 VVIAGRPNAGKSSLLNALAGREAAIVT 30
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 29.9 bits (67), Expect = 0.17
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQGD 51
++++ G SGAG +T+ Q + +
Sbjct: 6 IISVTGSSGAGTSTVKHTFDQIFRRE 31
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 29.6 bits (65), Expect = 0.18
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTLT 86
+ I+G GK+TLL + + V + + ++++ F V + T
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSET 62
Query: 87 VHEHMTLMARLKMDRNLHHVERARTV 112
L+ RL ++R L +E+A V
Sbjct: 63 ND----LVERLGIERTLQEIEKADIV 84
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 29.7 bits (65), Expect = 0.19
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 27 LAIMGPSGAGKTTLLACISQ 46
L ++G +GKTT + I+
Sbjct: 5 LTLVGLQYSGKTTFVNVIAS 24
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 29.3 bits (64), Expect = 0.20
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQG 50
++ +G G+GK+T + G
Sbjct: 4 IILTIGCPGSGKSTWAREFIAKNPG 28
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId:
5076]}
Length = 208
Score = 29.4 bits (65), Expect = 0.23
Identities = 11/55 (20%), Positives = 21/55 (38%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQH 78
G + + G S +GK+TL + ++ D + + + K GF
Sbjct: 24 GLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEAD 78
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 29.6 bits (66), Expect = 0.23
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 15 ESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQG 50
+ LS I + ++AI+G GK+ L+ ++ + +G
Sbjct: 23 KILSAITQPMVVVAIVGLYRTGKSYLMNKLAGKKKG 58
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 29.4 bits (65), Expect = 0.25
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
AIMG G+GK T+ + I++
Sbjct: 9 AAIMGAPGSGKGTVSSRITKH 29
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 29.3 bits (64), Expect = 0.26
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 27 LAIMGPSGAGKTTLLACIS 45
L ++G AGKTT+L +
Sbjct: 5 LLMLGLDNAGKTTILKKFN 23
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 29.1 bits (64), Expect = 0.27
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 27 LAIMGPSGAGKTTLLACISQRI 48
+ + G G GKTTL ++ +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKS 28
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 29.0 bits (63), Expect = 0.27
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
I+G GK+TL + ++
Sbjct: 4 LIVGRPNVGKSTLFNKLVKK 23
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 29.6 bits (65), Expect = 0.27
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 6/91 (6%)
Query: 23 SGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTV 82
S AI+G +G+GK+ + I + G + + + +L+ S P
Sbjct: 25 SKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASRIS---DLIFAGSKNEPPAKYAE 81
Query: 83 DTLTVHEHMTLMARLKMDRNLHHVERARTVD 113
+ + +D + + R D
Sbjct: 82 VAIYFNNE---DRGFPIDEDEVVIRRRVYPD 109
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 28.9 bits (63), Expect = 0.29
Identities = 12/79 (15%), Positives = 21/79 (26%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTLT 86
L +G AGKTTLL + + E+ + + + H
Sbjct: 3 LLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWK 62
Query: 87 VHEHMTLMARLKMDRNLHH 105
+ +D
Sbjct: 63 DYFPEVNGIVFLVDAADPE 81
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 29.1 bits (64), Expect = 0.29
Identities = 6/21 (28%), Positives = 9/21 (42%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
+ I G +GK T I +
Sbjct: 6 VMISGAPASGKGTQCELIKTK 26
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 29.1 bits (64), Expect = 0.30
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
+ ++G AGK T I ++
Sbjct: 3 IILLGAPVAGKGTQAQFIMEK 23
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 29.2 bits (64), Expect = 0.30
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQ 49
G+L+ + G AGK+T + + +
Sbjct: 3 GALIVLEGVDRAGKSTQSRKLVEALC 28
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 28.8 bits (63), Expect = 0.34
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 12/38 (31%)
Query: 4 FHPLFGDTNYKESLSGIAESGSLLAIMGPSGAGKTTLL 41
+FG+ + + ++G AGKTT+L
Sbjct: 4 LSKIFGNKEMR------------ILMLGLDAAGKTTIL 29
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 28.8 bits (63), Expect = 0.35
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
++GP GAGK T +++
Sbjct: 6 AVLLGPPGAGKGTQAPKLAKN 26
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 28.7 bits (63), Expect = 0.35
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
L +MG GAGK T I
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAA 23
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 28.7 bits (63), Expect = 0.35
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 15 ESLSGIAESGSLLAIMGPSGAGKTTLLACISQR 47
ES S ++ + ++ +G GAGK+T +
Sbjct: 5 ESSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVS 37
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 28.9 bits (63), Expect = 0.35
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQ 49
L+AI G GAGK TL+ +S +
Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFR 25
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 28.8 bits (63), Expect = 0.35
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 29 IMGPSGAGKTTLLACISQR 47
++G G+GK T A I +
Sbjct: 11 VLGGPGSGKGTQCANIVRD 29
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.8 bits (63), Expect = 0.36
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
+ ++GP GAGK T + +R
Sbjct: 5 MVLIGPPGAGKGTQAPNLQER 25
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase
(APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 28.9 bits (63), Expect = 0.38
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQ 49
G + + G SGAGKTT+ + + +
Sbjct: 19 GCTVWLTGLSGAGKTTVSMALEEYLV 44
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 28.8 bits (63), Expect = 0.40
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 26 LLAIMGPSGAGKTTLLACISQR 47
+ I G G+GKTT L +
Sbjct: 11 TVLIEGNIGSGKTTYLNHFEKY 32
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 28.5 bits (62), Expect = 0.41
Identities = 8/22 (36%), Positives = 17/22 (77%)
Query: 27 LAIMGPSGAGKTTLLACISQRI 48
+ ++GP GAGK+T+ ++Q++
Sbjct: 5 IFLVGPMGAGKSTIGRQLAQQL 26
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 28.4 bits (62), Expect = 0.42
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQ 49
+ + G G GK+T+LA + + +
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILD 26
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 28.7 bits (63), Expect = 0.42
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
+ +MG GAGK T I ++
Sbjct: 3 IVLMGLPGAGKGTQADRIVEK 23
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 28.8 bits (63), Expect = 0.43
Identities = 5/19 (26%), Positives = 8/19 (42%)
Query: 28 AIMGPSGAGKTTLLACISQ 46
+G +GKT L +
Sbjct: 4 LFVGLCDSGKTLLFVRLLT 22
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle
domain {Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 28.4 bits (62), Expect = 0.45
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
++G GK+TLL+ +S
Sbjct: 5 GLVGFPSVGKSTLLSVVSSA 24
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia
coli [TaxId: 562]}
Length = 222
Score = 28.5 bits (62), Expect = 0.46
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 23 SGSLLAIMGPSGAGKTTLLACIS 45
+ + G +GAGK+T +A
Sbjct: 23 DELVTTLSGGNGAGKSTTMAAFV 45
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 28.5 bits (62), Expect = 0.47
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
AI+G GK+TL I +
Sbjct: 12 AIVGRPNVGKSTLFNAILNK 31
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 28.4 bits (62), Expect = 0.48
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 12/40 (30%)
Query: 7 LFGDTNYKESLSGIAESGSLLAIMGPSGAGKTTLLACISQ 46
LF +K + I+G AGKTT+L S
Sbjct: 10 LFNHQEHK------------VIIVGLDNAGKTTILYQFSM 37
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 28.4 bits (62), Expect = 0.50
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
+ ++G GAGK T + +
Sbjct: 11 IFVLGGPGAGKGTQCEKLVKD 31
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 28.4 bits (62), Expect = 0.51
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
+ ++G GAGK T A I ++
Sbjct: 4 VFVLGGPGAGKGTQCARIVEK 24
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 28.9 bits (63), Expect = 0.51
Identities = 8/18 (44%), Positives = 15/18 (83%)
Query: 28 AIMGPSGAGKTTLLACIS 45
+I+GP+G+GK+ ++ IS
Sbjct: 29 SIIGPNGSGKSNMMDAIS 46
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 28.0 bits (62), Expect = 0.53
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 18 SGIAESGSLLAIMGPSGAGKTTLLACISQR 47
+ G + I G SG GK+ + +R
Sbjct: 9 VLVDVYGVGVLITGDSGIGKSETALELIKR 38
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 28.6 bits (62), Expect = 0.54
Identities = 17/176 (9%), Positives = 44/176 (25%), Gaps = 2/176 (1%)
Query: 14 KESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSG 73
L ++G G GKT L + + + + + + +N +
Sbjct: 33 GNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGE 92
Query: 74 FVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLS 133
++ +A L + +D L +
Sbjct: 93 IARSLNIPFPR-RGLSRDEFLALLVEHLRERDLYMFLVLDDAF-NLAPDILSTFIRLGQE 150
Query: 134 GGERKRVALAVQTIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERAR 189
+ +A+ + + D + + + K ++RA+
Sbjct: 151 ADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAK 206
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 28.3 bits (62), Expect = 0.54
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
+ ++GP GAGK T ++++
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEK 23
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 28.4 bits (62), Expect = 0.56
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQ 49
+ I G GAGKTT + + ++
Sbjct: 2 SKYIVIEGLEGAGKTTARNVVVETLE 27
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 28.1 bits (61), Expect = 0.56
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 27 LAIMGPSGAGKTTLLACI 44
+ I+G GAGKTT+L +
Sbjct: 8 ILILGLDGAGKTTILYRL 25
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 28.2 bits (61), Expect = 0.56
Identities = 10/79 (12%), Positives = 17/79 (21%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTLT 86
+ ++G G GK+ L G + S V
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRW 63
Query: 87 VHEHMTLMARLKMDRNLHH 105
+ H M +
Sbjct: 64 LPGHCMAMGDAYVIVYSVT 82
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 28.4 bits (62), Expect = 0.58
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 26 LLAIMGPSGAGKTTLLACISQR 47
++ ++G G+GK T I Q+
Sbjct: 10 IIFVVGGPGSGKGTQCEKIVQK 31
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal
domain {Clostridium acetobutylicum [TaxId: 1488]}
Length = 141
Score = 27.7 bits (61), Expect = 0.60
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 19 GIAESGSLLAIMGPSGAGKTTLL 41
+ G + I+GP +GK+ L
Sbjct: 2 RPKDHGWVEVIVGPMYSGKSEEL 24
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 28.3 bits (62), Expect = 0.62
Identities = 10/76 (13%), Positives = 19/76 (25%), Gaps = 1/76 (1%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQG-DVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTL 85
+ I G G GK+T + + + +L + + L +D
Sbjct: 54 VGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRN 113
Query: 86 TVHEHMTLMARLKMDR 101
L
Sbjct: 114 AFIRPSPSSGTLGGVA 129
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 28.1 bits (61), Expect = 0.63
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 29 IMGPSGAGKTTLLACISQRIQ 49
+ GP G GKTTL+ S+ ++
Sbjct: 6 LTGPPGVGKTTLIHKASEVLK 26
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 27.9 bits (62), Expect = 0.64
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 18 SGIAESGSLLAIMGPSGAGKTTLLACISQR 47
+ G + I G SG GK+ + QR
Sbjct: 8 VLVDIYGLGVLITGDSGVGKSETALELVQR 37
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 28.1 bits (61), Expect = 0.64
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQG 50
++I G AGK+T + + Q +
Sbjct: 2 IKKISIEGNIAAGKSTFVNILKQLCED 28
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 28.2 bits (61), Expect = 0.65
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 28 AIMGPSGAGKTTLLACI 44
A+ G S GK++ + +
Sbjct: 27 ALAGRSNVGKSSFINSL 43
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 27.7 bits (61), Expect = 0.66
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 21 AESGSLLAIMGPSGAGKTTLLACISQRIQGD 51
E ++ + G GAGKTTL + Q I
Sbjct: 30 TEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima
[TaxId: 2336]}
Length = 308
Score = 28.5 bits (62), Expect = 0.68
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 23 SGSLLAIMGPSGAGKTTLLACIS 45
S + AI+GP+G+GK+ ++ I
Sbjct: 23 SDRVTAIVGPNGSGKSNIIDAIK 45
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2),
N-terminal (G) domain {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 341
Score = 28.2 bits (62), Expect = 0.69
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
+++ GK+TL + QR
Sbjct: 21 SVIAHVDHGKSTLTDSLVQR 40
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 27.7 bits (60), Expect = 0.69
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 27 LAIMGPSGAGKTTLLACISQ 46
+ ++G AGKTT+L +
Sbjct: 3 ILMVGLDAAGKTTILYKLKL 22
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 28.1 bits (61), Expect = 0.70
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 27 LAIMGPSGAGKTTLLACISQ 46
L +G AGKTTLL +
Sbjct: 16 LVFLGLDNAGKTTLLHMLKD 35
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 27.7 bits (60), Expect = 0.71
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
G S GK+TL+ ++ +
Sbjct: 4 IFAGRSNVGKSTLIYRLTGK 23
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 28.0 bits (62), Expect = 0.72
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 18 SGIAESGSLLAIMGPSGAGKTTLLACISQR 47
+ G + + G SG GK+ + +
Sbjct: 9 VLLEVFGVGVLLTGRSGIGKSECALDLINK 38
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 27.8 bits (60), Expect = 0.73
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 28 AIMGPSGAGKTTLLACISQ 46
A G S AGK++ L ++
Sbjct: 20 AFAGRSNAGKSSALNTLTN 38
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 27.4 bits (60), Expect = 0.74
Identities = 10/69 (14%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Query: 24 GSLLAIMGPSGAGKTT-LLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTV 82
G + I+GP +GK+T L+ + + ++ + + L
Sbjct: 2 GQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSSFCTHDRNTMEALPA 61
Query: 83 DTLTVHEHM 91
L
Sbjct: 62 CLLRDVAQE 70
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle
domain {Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 27.7 bits (60), Expect = 0.78
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
++G AGK++LLA +++
Sbjct: 5 GLVGYPNAGKSSLLAAMTRA 24
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 27.6 bits (60), Expect = 0.81
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 27 LAIMGPSGAGKTTLLACISQRI 48
+ +G G+GK+TL +++ +
Sbjct: 3 IVFIGFMGSGKSTLARALAKDL 24
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 27.6 bits (60), Expect = 0.82
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 27 LAIMGPSGAGKTTLLACISQRI 48
++G G+GK+T+ +++ +
Sbjct: 4 AVLVGLPGSGKSTIGRRLAKAL 25
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 27.6 bits (60), Expect = 0.82
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G AGKTTLL
Sbjct: 19 ILLLGLDNAGKTTLL 33
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 267
Score = 27.9 bits (61), Expect = 0.83
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 28 AIMGPSGAGKTTLLACI 44
A++G +G+GKTTL +
Sbjct: 6 ALVGHAGSGKTTLTEAL 22
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 28.0 bits (61), Expect = 0.84
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 27 LAIMGPSGAGKTTLLACI 44
L + G +G GK+ LL +
Sbjct: 53 LLVNGATGTGKSVLLREL 70
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 27.6 bits (60), Expect = 0.84
Identities = 6/35 (17%), Positives = 14/35 (40%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNG 60
L+ ++G GKT + +++ + N
Sbjct: 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNV 38
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase),
helicase domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 28.1 bits (61), Expect = 0.85
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 15 ESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLE 62
+ G G ++ + SG GK+T + + + + ++ L LE
Sbjct: 27 DKTLGARG-GEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLE 73
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId:
271]}
Length = 207
Score = 27.8 bits (61), Expect = 0.92
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 20 IAESGSLLAIMGPSGAGKTTLLACISQRIQ 49
+ + +L ++G G+GKTT A ++ +
Sbjct: 6 VLKDRNLWFLVGLQGSGKTTTAAKLALYYK 35
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 27.5 bits (60), Expect = 0.97
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
+ I+G S GKT+ L
Sbjct: 8 ILIIGNSSVGKTSFL 22
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 27.8 bits (61), Expect = 1.0
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQ 49
+ GP G+GK+ I +
Sbjct: 29 FIFFSGPQGSGKSFTSIQIYNHLM 52
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 27.2 bits (59), Expect = 1.0
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
++G +G GK+ LL
Sbjct: 8 FLVIGNAGTGKSCLL 22
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 27.5 bits (60), Expect = 1.2
Identities = 14/130 (10%), Positives = 35/130 (26%), Gaps = 7/130 (5%)
Query: 22 ESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLT 81
L + G +G+GK+ + + + + + + +K SG P+
Sbjct: 42 LDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINY-------DSIVWLKDSGTAPKSTFD 94
Query: 82 VDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRVA 141
+ T + + L H + +V+ +
Sbjct: 95 LFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETIRWAQ 154
Query: 142 LAVQTIIVQS 151
+V +
Sbjct: 155 ELRLRCLVTT 164
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 27.3 bits (59), Expect = 1.2
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G G GK+ L
Sbjct: 9 LVVVGGGGVGKSALT 23
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 27.4 bits (60), Expect = 1.3
Identities = 8/40 (20%), Positives = 19/40 (47%)
Query: 14 KESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVD 53
++L I S +A+ G +G+GK++ + + +
Sbjct: 46 SDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIGNEEEG 85
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 27.0 bits (58), Expect = 1.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 27 LAIMGPSGAGKTTLL 41
+ I+G SG GKT+L+
Sbjct: 5 VIILGDSGVGKTSLM 19
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 184
Score = 27.0 bits (58), Expect = 1.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 27 LAIMGPSGAGKTTLL 41
+ I+G SG GKT+L+
Sbjct: 5 VIILGDSGVGKTSLM 19
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 27.2 bits (59), Expect = 1.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 27 LAIMGPSGAGKTTLL 41
+ I+G GAGKTT+L
Sbjct: 20 ILILGLDGAGKTTIL 34
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 27.0 bits (58), Expect = 1.3
Identities = 3/15 (20%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G GK++++
Sbjct: 5 MVVVGNGAVGKSSMI 19
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 27.1 bits (59), Expect = 1.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G SG GKT LL
Sbjct: 9 VMLVGDSGVGKTCLL 23
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.8 bits (58), Expect = 1.4
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G GKT+L+
Sbjct: 6 VVLLGEGCVGKTSLV 20
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 27.3 bits (60), Expect = 1.4
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQGD 51
+ I GP G GKTT + D
Sbjct: 6 RVYIDGPHGMGKTTTTQLLVALGSRD 31
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 27.2 bits (59), Expect = 1.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
L +G SG GKTT L
Sbjct: 8 LLALGDSGVGKTTFL 22
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 27.2 bits (59), Expect = 1.4
Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 27 LAIMGPSGAGKTTLLACISQ----RIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTV 82
+ ++G GKTTL+ I+ + ++ + + E N+ V S +
Sbjct: 11 IGVVGHVDHGKTTLVQAITGIWTSKHSEELKRGMTIKLGYAETNIGVCESC---KKPEAY 67
Query: 83 DTLTVHEHMTLMARLKMDRNLHHVERARTVD 113
T + K R + ++
Sbjct: 68 VTEPSCKSCGSDDEPKFLRRISFIDAPGHEV 98
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Trypanosoma cruzi [TaxId: 5693]}
Length = 323
Score = 27.2 bits (60), Expect = 1.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 20 IAESGSLLAIMGPSGAGKTTLLACISQRIQGD 51
+ + G + G SG GKTTL A + + GD
Sbjct: 10 VGKQGDVTVFFGLSGTGKTTLSADPHRNLIGD 41
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 27.1 bits (59), Expect = 1.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G SG GK+ LL
Sbjct: 9 LLLIGNSGVGKSCLL 23
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 27.0 bits (60), Expect = 1.5
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQ 49
G + + G +G GKT L+ + +
Sbjct: 68 GGKIGLFGGAGVGKTVLIMELINNVA 93
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.7 bits (58), Expect = 1.5
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G +G GKT L+
Sbjct: 8 IVLIGNAGVGKTCLV 22
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 27.0 bits (58), Expect = 1.5
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 27 LAIMGPSGAGKTTLLACISQ 46
L I G GKTTL +++
Sbjct: 8 LGIFGHIDHGKTTLSKVLTE 27
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia
chrysanthemi [TaxId: 556]}
Length = 170
Score = 26.8 bits (58), Expect = 1.5
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 27 LAIMGPSGAGKTTLLACISQRI 48
+ ++G G G TT+ +++ +
Sbjct: 5 IFMVGARGCGMTTVGRELARAL 26
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 26.6 bits (57), Expect = 1.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
+AI+G GK++L
Sbjct: 7 IAILGYRSVGKSSLT 21
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 26.7 bits (58), Expect = 1.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G SG GK+ LL
Sbjct: 5 ILLIGDSGVGKSCLL 19
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 26.7 bits (58), Expect = 1.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 27 LAIMGPSGAGKTTLL 41
+ I+G SG GK++LL
Sbjct: 10 ILIIGESGVGKSSLL 24
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 26.8 bits (58), Expect = 1.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G SG GK+ LL
Sbjct: 7 VVLIGDSGVGKSNLL 21
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.5 bits (57), Expect = 1.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G G GKTT +
Sbjct: 6 LVLVGDGGTGKTTFV 20
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 26.5 bits (57), Expect = 1.7
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G S GKT L
Sbjct: 5 IIVIGDSNVGKTCLT 19
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.5 bits (57), Expect = 1.7
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G S GK++L+
Sbjct: 9 LVLLGESAVGKSSLV 23
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal
domain {Ureaplasma urealyticum [TaxId: 2130]}
Length = 139
Score = 26.6 bits (58), Expect = 1.7
Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 24 GSLLAIMGPSGAGKTT-LLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTV 82
G + I GP AGKT L+ + + DV + ++ ++ + V
Sbjct: 2 GWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTRSIRNIQSRTGTSLPSVEV 61
Query: 83 DTLTVHEHM 91
++ +
Sbjct: 62 ESAPEILNY 70
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 26.6 bits (57), Expect = 1.7
Identities = 4/15 (26%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G + GK++++
Sbjct: 6 LVLLGEAAVGKSSIV 20
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 26.9 bits (59), Expect = 1.7
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 29 IMGPSGAGKTTLLACISQRI-QGDV 52
++G G GKT ++ ++QRI +GDV
Sbjct: 48 LIGEPGVGKTAIVEGLAQRIVKGDV 72
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 26.6 bits (58), Expect = 1.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQ 49
G ++ ++G +G GKTT +A + + Q
Sbjct: 6 GRVVLVVGVNGVGKTTTIAKLGRYYQ 31
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 26.6 bits (57), Expect = 1.7
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G G GK+TL
Sbjct: 6 VVLIGEQGVGKSTLA 20
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 26.8 bits (58), Expect = 1.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
I+G G GK+ LL
Sbjct: 7 YIIIGDMGVGKSCLL 21
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 26.6 bits (58), Expect = 1.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G SG GKT +L
Sbjct: 9 LLLIGDSGVGKTCVL 23
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 26.7 bits (58), Expect = 1.9
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 27 LAIMGPSGAGKTTLLACISQR 47
+ +MG G GK++ + I
Sbjct: 35 ILVMGKGGVGKSSTVNSIIGE 55
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 26.5 bits (57), Expect = 1.9
Identities = 4/15 (26%), Positives = 12/15 (80%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G +G GK++++
Sbjct: 7 VCLLGDTGVGKSSIM 21
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 26.9 bits (59), Expect = 2.0
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQGDVD 53
+ + G G GK+T ++ G
Sbjct: 9 IYLDGVYGIGKSTTGRVMASAASGGSP 35
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 26.5 bits (57), Expect = 2.1
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
L +G GKT+L+
Sbjct: 3 LVFLGEQSVGKTSLI 17
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 27.0 bits (59), Expect = 2.1
Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Query: 29 IMGPSGAGKTT-------LLACISQRIQGDVDGQILLNGLEVEKNLMVKV 71
G SGAGKT LA ++ +G D I L ++
Sbjct: 96 CTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQL 145
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 26.5 bits (57), Expect = 2.3
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQ 49
L+I G GK+T + +++
Sbjct: 4 RLSIEGNIAVGKSTFVKLLTKTYP 27
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 26.2 bits (57), Expect = 2.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQ 49
+ +G GKTTL A I++ +
Sbjct: 6 VGTIGHVDHGKTTLTAAITKILA 28
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 26.5 bits (57), Expect = 2.4
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G +GK+T++
Sbjct: 5 LLLLGAGESGKSTIV 19
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.1 bits (56), Expect = 2.5
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
+A+ G G GK++L+
Sbjct: 5 VAVFGAGGVGKSSLV 19
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 26.6 bits (57), Expect = 2.6
Identities = 16/174 (9%), Positives = 43/174 (24%), Gaps = 2/174 (1%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTL 85
+ +G G GKTTL +R+ + + L + N + + + T
Sbjct: 48 IYGSIGRVGIGKTTLAKFTVKRVS-EAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQTG 106
Query: 86 TVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRVALAVQ 145
+ A + + ++ ++ + + +
Sbjct: 107 YPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIA-AEDLYTLLRVHEEI 165
Query: 146 TIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELG 199
+ + D + + +++ A L L
Sbjct: 166 PSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILE 219
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 26.1 bits (56), Expect = 2.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
L I+G GKT LL
Sbjct: 5 LVIVGDGACGKTCLL 19
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.0 bits (56), Expect = 2.7
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 29 IMGPSGAGKTTLL 41
++G +GK+T L
Sbjct: 7 LLGAGESGKSTFL 19
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 26.1 bits (56), Expect = 2.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
LAI G +G GK+ L+
Sbjct: 5 LAIFGRAGVGKSALV 19
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 26.2 bits (56), Expect = 2.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G S GKT LL
Sbjct: 5 IVVVGDSQCGKTALL 19
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 26.3 bits (57), Expect = 2.7
Identities = 4/13 (30%), Positives = 10/13 (76%)
Query: 29 IMGPSGAGKTTLL 41
++G +GK+T++
Sbjct: 11 LLGAGESGKSTIV 23
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 26.2 bits (56), Expect = 2.8
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G G GK+ L
Sbjct: 7 LVVVGDGGVGKSALT 21
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.1 bits (56), Expect = 2.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G G GK+ L
Sbjct: 6 LVVVGAGGVGKSALT 20
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.1 bits (56), Expect = 2.9
Identities = 4/13 (30%), Positives = 9/13 (69%)
Query: 29 IMGPSGAGKTTLL 41
++G +GK+T +
Sbjct: 7 LLGTGESGKSTFI 19
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 26.2 bits (57), Expect = 2.9
Identities = 6/25 (24%), Positives = 17/25 (68%)
Query: 25 SLLAIMGPSGAGKTTLLACISQRIQ 49
++ ++G +G GKTT + ++++ +
Sbjct: 10 FVILMVGVNGVGKTTTIGKLARQFE 34
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 26.2 bits (57), Expect = 3.0
Identities = 5/29 (17%), Positives = 12/29 (41%)
Query: 26 LLAIMGPSGAGKTTLLACISQRIQGDVDG 54
+++I G GK+T + + +
Sbjct: 82 IISIAGSVAVGKSTTARVLQALLSRWPEH 110
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.0 bits (56), Expect = 3.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 27 LAIMGPSGAGKTTLL 41
I+G +G GK+ LL
Sbjct: 6 YIIIGDTGVGKSCLL 20
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme
UvrB {Bacillus caldotenax [TaxId: 1395]}
Length = 413
Score = 26.3 bits (57), Expect = 3.1
Identities = 6/39 (15%), Positives = 17/39 (43%)
Query: 14 KESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDV 52
+ + G+ ++G +G GKT ++ + ++
Sbjct: 21 AKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPT 59
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 25.7 bits (55), Expect = 3.2
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G G GK+ L
Sbjct: 7 VIMVGSGGVGKSALT 21
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 25.8 bits (55), Expect = 3.2
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G G GK+ L
Sbjct: 8 LVVVGGGGVGKSALT 22
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 26.1 bits (57), Expect = 3.3
Identities = 6/20 (30%), Positives = 7/20 (35%)
Query: 28 AIMGPSGAGKTTLLACISQR 47
+ G G GKTT
Sbjct: 9 YLDGAYGIGKTTAAEEFLHH 28
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 25.7 bits (55), Expect = 3.3
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G G GK++L+
Sbjct: 9 VILLGDGGVGKSSLM 23
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 25.7 bits (55), Expect = 3.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 27 LAIMGPSGAGKTTLL 41
++G GKT LL
Sbjct: 8 CVVVGDGAVGKTCLL 22
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 25.7 bits (55), Expect = 3.5
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
+ ++G G GK+ L
Sbjct: 6 VVVLGSGGVGKSALT 20
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 25.9 bits (55), Expect = 3.5
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 25 SLLAIMGPSGAGKTTLLACISQRIQ 49
+ GP G GKTT ++Q +
Sbjct: 53 RAAMLYGPPGIGKTTAAHLVAQELG 77
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 25.7 bits (55), Expect = 3.6
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G G GK+ L
Sbjct: 6 LVVLGSGGVGKSALT 20
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 26.2 bits (57), Expect = 3.7
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 7/35 (20%)
Query: 29 IMGPSGAGKTT-------LLACISQRIQGDVDGQI 56
I G SGAGKT LA ++ R Q + G +
Sbjct: 130 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 164
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 25.7 bits (55), Expect = 3.7
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 27 LAIMGPSGAGKTTLL 41
L ++G + +GK++L+
Sbjct: 8 LGVLGDARSGKSSLI 22
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 25.7 bits (55), Expect = 4.1
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 7/118 (5%)
Query: 29 IMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQ----HDLTVDT 84
+ G G+GKT+L + I + QG+V I+++ ++
Sbjct: 37 LGGQPGSGKTSLRSAIFEETQGNV---IVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPY 93
Query: 85 LTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRVAL 142
+ NL RT D ++ +L+ K + K +
Sbjct: 94 SNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSY 151
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 25.7 bits (55), Expect = 4.2
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 27 LAIMGPSGAGKTTLL 41
++G GKT LL
Sbjct: 12 CVVVGDGAVGKTCLL 26
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b,
N-terminal (G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 25.8 bits (55), Expect = 4.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 28 AIMGPSGAGKTTLLACI 44
+++G GKTTLL I
Sbjct: 9 SVLGHVDHGKTTLLDHI 25
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase,
BchI {Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 25.7 bits (55), Expect = 4.5
Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 10/64 (15%)
Query: 17 LSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVP 76
L+ + + + G G GK+T + ++ LL +E + V
Sbjct: 21 LTAVDPGIGGVLVFGDRGTGKSTAVRALAA----------LLPEIEAVEGCPVSSPNVEM 70
Query: 77 QHDL 80
D
Sbjct: 71 IPDW 74
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia
coli, RepD [TaxId: 562]}
Length = 306
Score = 25.8 bits (55), Expect = 4.7
Identities = 6/22 (27%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 21 AESGSLLAIMGPSGAGKTTLLA 42
+G L ++ +G+GKT ++
Sbjct: 12 FVTGPCL-VLAGAGSGKTRVIT 32
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 25.4 bits (54), Expect = 4.7
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 27 LAIMGPSGAGKTTLL 41
++G GKT LL
Sbjct: 6 CVVVGDGAVGKTCLL 20
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 25.5 bits (55), Expect = 4.8
Identities = 5/23 (21%), Positives = 11/23 (47%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQ 49
+ ++G G GK T ++ +
Sbjct: 15 IMLVGVQGTGKATTAGKLAYFYK 37
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 25.3 bits (54), Expect = 5.0
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 27 LAIMGPSGAGKTTLLACIS 45
+ ++G GKTTL ++
Sbjct: 8 IGMVGHVDHGKTTLTKALT 26
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 25.4 bits (55), Expect = 5.7
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 14 KESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDV 52
K + I + L GP +GKTTL A + + G
Sbjct: 145 KCMVYNIPKKRYWL-FKGPIDSGKTTLAAALLELCGGKA 182
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 25.1 bits (54), Expect = 5.8
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 27 LAIMGPSGAGKTTLLACISQRIQ 49
+ ++G +G GKTT +++
Sbjct: 14 IMVVGVNGTGKTTSCGKLAKMFV 36
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 25.2 bits (55), Expect = 6.0
Identities = 9/45 (20%), Positives = 14/45 (31%)
Query: 24 GSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLM 68
G I+G GKT++ + DG L +
Sbjct: 68 GQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAI 112
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 25.1 bits (53), Expect = 6.6
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 11 TNYKESLSGIAESGSL---LAIMGPSGAGKTTLLACISQ 46
E L ++G L I G G L+ +S+
Sbjct: 8 RPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSR 46
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 318
Score = 25.4 bits (54), Expect = 6.7
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 21 AESGSLLAIMGPSGAGKTTLLA 42
G LL IM +G+GKT +L
Sbjct: 22 TTEGPLL-IMAGAGSGKTRVLT 42
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 25.1 bits (54), Expect = 7.3
Identities = 7/30 (23%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 20 IAESGSLLAIMGPSGAGKTTLLACISQRIQ 49
+ L+ +GP+G GKT + +++
Sbjct: 47 VTPKNILM--IGPTGVGKTEIARRLAKLAN 74
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 24.9 bits (53), Expect = 7.4
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 26 LLAIMGPSGAGKTTLLACISQR 47
++ I G G+GK+T+ A +
Sbjct: 5 IIGITGNIGSGKSTVAALLRSW 26
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Thermus thermophilus [TaxId:
274]}
Length = 204
Score = 24.9 bits (54), Expect = 7.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 27 LAIMGPSGAGKTTLLACI 44
+ +G GKTTL A +
Sbjct: 6 VGTIGHVDHGKTTLTAAL 23
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha,
N-terminal (G) domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 224
Score = 24.8 bits (53), Expect = 8.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 27 LAIMGPSGAGKTTLLACI 44
L ++G GK+TL+ +
Sbjct: 6 LIVIGHVDHGKSTLVGRL 23
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III,
N-domain {Thermotoga maritima [TaxId: 2336]}
Length = 198
Score = 24.6 bits (53), Expect = 8.3
Identities = 6/39 (15%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 15 ESLSGIAESGSL--LAIMGPSGAGKTTLLACISQRIQGD 51
E+L I E + I G + + + + ++
Sbjct: 4 ETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKF 42
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 24.9 bits (53), Expect = 8.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 29 IMGPSGAGKTTLL 41
+ G GAGKTTLL
Sbjct: 8 LTGFLGAGKTTLL 20
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.382
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 728,868
Number of extensions: 31262
Number of successful extensions: 369
Number of sequences better than 10.0: 1
Number of HSP's gapped: 341
Number of HSP's successfully gapped: 236
Length of query: 212
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 131
Effective length of database: 1,295,466
Effective search space: 169706046
Effective search space used: 169706046
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.2 bits)