RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8251
(434 letters)
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 53.5 bits (128), Expect = 2e-10
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 88 RPYICDWCGVGFRSKANLLQHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVH 140
+ Y C CG F K+ +H +H G R Y C VCGK F K + HM++H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 37.7 bits (87), Expect = 9e-05
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVH 112
+ C+ C K K H +H G RPY C CG F+ K +L+ H +H
Sbjct: 3 LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 34.3 bits (78), Expect = 0.002
Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 26/78 (33%)
Query: 116 RKYNCTVCGKAFSRKSFVTTHMRVHTGKLTGKFGQKMSALSGTAFAVEYEIIQECLFAKN 175
+ Y C CGK+F+ KS HM +H G G C
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCG-------------------VC----- 36
Query: 176 GGKAFSRKSFVTTHMRVH 193
GK F K + HM++H
Sbjct: 37 -GKKFKMKHHLVGHMKIH 53
Score = 32.3 bits (73), Expect = 0.008
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 34 CKETFYKHSELVRHLEREHNIPRSESSPWCCRFCNKRMMTKLSLGIHERIH 84
C ++F S+ RH+ + P+ C C K+ K L H +IH
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLR-----PYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 28.1 bits (62), Expect = 0.31
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 304 CDHHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
H RPY C VCG KF + H K H
Sbjct: 23 SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 52.2 bits (126), Expect = 4e-10
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
+H+G++ Y C CGKAFSR S + H RVHTG
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 49.2 bits (118), Expect = 6e-09
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 83 IHTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
IH+G++PY C CG F + L+QHQ VHTG
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 33.7 bits (78), Expect = 0.001
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
H ++PY C CG F++ + +H++ H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 33.7 bits (78), Expect = 0.002
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
GKAFSR S + H RVHTG
Sbjct: 14 GKAFSRSSILVQHQRVHTG 32
Score = 30.7 bits (70), Expect = 0.020
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTG 86
P+ C C K L H+R+HTG
Sbjct: 7 PYGCVECGKAFSRSSILVQHQRVHTG 32
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 49.8 bits (119), Expect = 3e-09
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 78 GIHERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
G E +R Y CD CG F ++L +H+ HTG
Sbjct: 1 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 47.5 bits (113), Expect = 2e-08
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 107 QHQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
+ + +R+Y C CGK+FS S ++ H R HTG
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 30.9 bits (70), Expect = 0.018
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
R Y CD CG F+ D+ +HR+ H
Sbjct: 7 QRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 29.4 bits (66), Expect = 0.071
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 174 KNGGKAFSRKSFVTTHMRVHTG 195
GK+FS S ++ H R HTG
Sbjct: 16 DECGKSFSHSSDLSKHRRTHTG 37
Score = 27.8 bits (62), Expect = 0.24
Identities = 9/26 (34%), Positives = 10/26 (38%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTG 86
+ C C K L H R HTG
Sbjct: 12 RYKCDECGKSFSHSSDLSKHRRTHTG 37
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 47.0 bits (112), Expect = 4e-08
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 82 RIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
R HTG++PY C C FR K L H +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 47.0 bits (112), Expect = 4e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 111 VHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
HTG++ Y C+ C K F +K + H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 35.0 bits (81), Expect = 6e-04
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKH-DEN 337
H ++PY C C F Q + H K++ D N
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 29.6 bits (67), Expect = 0.056
Identities = 4/20 (20%), Positives = 8/20 (40%)
Query: 177 GKAFSRKSFVTTHMRVHTGK 196
K F +K + H + +
Sbjct: 15 DKTFRQKQLLDMHFKRYHDP 34
Score = 27.7 bits (62), Expect = 0.26
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTG 86
P+ C C+K K L +H + +
Sbjct: 8 PYACSHCDKTFRQKQLLDMHFKRYHD 33
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 46.7 bits (111), Expect = 5e-08
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 112 HTGQRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT 145
+G+R + C +C AF+ K+ H++VHT L+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 35
Score = 40.1 bits (94), Expect = 1e-05
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 84 HTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
+G+RP++C C F +KAN +H VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 30.5 bits (69), Expect = 0.024
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 177 GKAFSRKSFVTTHMRVHTGKLT 198
AF+ K+ H++VHT L+
Sbjct: 14 LSAFTTKANCARHLKVHTDTLS 35
Score = 30.5 bits (69), Expect = 0.026
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 309 DRPYDCDVCGAKFTQVGDMRRHRKKHDEN 337
RP+ C +C + FT + RH K H +
Sbjct: 5 KRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 29.3 bits (66), Expect = 0.060
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTG 86
P+ CR C TK + H ++HT
Sbjct: 7 PFVCRICLSAFTTKANCARHLKVHTD 32
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 46.3 bits (110), Expect = 7e-08
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 80 HERIHTGQRPYICDWCGVGFRSKANLLQHQPVHTG 114
R TG +P+ C C F +L H+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 44.3 bits (105), Expect = 3e-07
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 108 HQPVHTGQRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
TG + + C C ++FSR + H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 31.6 bits (72), Expect = 0.009
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 306 HHCDRPYDCDVCGAKFTQVGDMRRHRKKH 334
+P+ C C F++ + HRK+H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 28.5 bits (64), Expect = 0.13
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 174 KNGGKAFSRKSFVTTHMRVHTG 195
+ ++FSR + H + H
Sbjct: 15 PDCDRSFSRSDHLALHRKRHML 36
Score = 24.7 bits (54), Expect = 3.0
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTG 86
P+ C C++ L +H + H
Sbjct: 11 PFQCPDCDRSFSRSDHLALHRKRHML 36
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 45.0 bits (107), Expect = 2e-07
Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 111 VHTGQRKYNCTVCGKAFSRKSFVTTH-MRVHTGKL 144
H+G++ Y C +C F++ + H ++ HT +
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36
Score = 43.0 bits (102), Expect = 8e-07
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 82 RIHTGQRPYICDWCGVGFRSKANLLQH-QPVHTG 114
R H+G++PY C C F + H HT
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 32.6 bits (75), Expect = 0.004
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 306 HHCDRPYDCDVCGAKFTQVGDMRRH-RKKHDEN 337
H ++PY+C +C A+FTQ G M+ H +KH EN
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 26.9 bits (60), Expect = 0.47
Identities = 4/22 (18%), Positives = 10/22 (45%), Gaps = 1/22 (4%)
Query: 177 GKAFSRKSFVTTH-MRVHTGKL 197
F++ + H ++ HT +
Sbjct: 15 HARFTQSGTMKMHILQKHTENV 36
Score = 23.8 bits (52), Expect = 5.3
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 31 CHICKETFYKHSELVRHLEREH 52
C+IC F + + H+ ++H
Sbjct: 11 CYICHARFTQSGTMKMHILQKH 32
Score = 23.8 bits (52), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 61 PWCCRFCNKRMMTKLSLGIHE-RIHTG 86
P+ C C+ R ++ +H + HT
Sbjct: 8 PYECYICHARFTQSGTMKMHILQKHTE 34
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 44.2 bits (105), Expect = 3e-07
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 116 RKYNCTVCGKAFSRKSFVTTHMRVHTG 142
R + C VC +AF+R+ + H R HT
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 39.5 bits (93), Expect = 1e-05
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 88 RPYICDWCGVGFRSKANLLQHQPVHTGQR 116
R ++C+ C F + +L +H HT ++
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 33.8 bits (78), Expect = 0.001
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
+AF+R+ + H R HT
Sbjct: 9 TRAFARQEHLKRHYRSHTN 27
Score = 31.8 bits (73), Expect = 0.007
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 310 RPYDCDVCGAKFTQVGDMRRHRKKH 334
R + C+VC F + ++RH + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 31.8 bits (73), Expect = 0.008
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQR 88
+ C C + + L H R HT ++
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 44.1 bits (105), Expect = 3e-07
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 115 QRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
Q+ + C +C + FSR +TTH+R HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 38.0 bits (89), Expect = 4e-05
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 87 QRPYICDWCGVGFRSKANLLQHQPVHTG 114
Q+P+ C C F +L H HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 34.5 bits (80), Expect = 8e-04
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
+ FSR +TTH+R HTG
Sbjct: 10 MRNFSRSDHLTTHIRTHTG 28
Score = 30.7 bits (70), Expect = 0.019
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTG 86
P+ CR C + L H R HTG
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 30.7 bits (70), Expect = 0.020
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 310 RPYDCDVCGAKFTQVGDMRRHRKKH 334
+P+ C +C F++ + H + H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 43.4 bits (103), Expect = 7e-07
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 85 TGQRPYICDWCGVGFRSKANLLQH-QPVHTGQRKYNCTV 122
+ +PYIC CG GF +L H + VHT +R + C V
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 40.0 bits (94), Expect = 1e-05
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 113 TGQRKYNCTVCGKAFSRKSFVTTHMR-VHTG 142
+ + Y C CGK FSR + H++ VHT
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTS 31
Score = 38.1 bits (89), Expect = 5e-05
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 61 PWCCRFCNKRMMTKLSLGIHER-IHTGQRPYICD 93
P+ C+ C K L H + +HT +RP+ C
Sbjct: 5 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 30.0 bits (68), Expect = 0.039
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 309 DRPYDCDVCGAKFTQVGDMRRHRKKH 334
+PY C CG F++ + H K+
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQV 28
Score = 28.8 bits (65), Expect = 0.11
Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Query: 177 GKAFSRKSFVTTHMR-VHTG 195
GK FSR + H++ VHT
Sbjct: 12 GKGFSRPDHLNGHIKQVHTS 31
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 40.8 bits (96), Expect = 4e-06
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 118 YNCTVCGKAFSRKSFVTTHMRVHTG 142
+ C C K F R ++ H++ H
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQN 27
Score = 38.1 bits (89), Expect = 4e-05
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 88 RPYICDWCGVGFRSKANLLQHQPVHTGQR 116
+ + C C F +L +H H ++
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 32.3 bits (74), Expect = 0.004
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHTGQR 88
+ C C KR M L H + H ++
Sbjct: 2 KFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 31.5 bits (72), Expect = 0.008
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
K F R ++ H++ H
Sbjct: 9 PKRFMRSDHLSKHIKTHQN 27
Score = 30.0 bits (68), Expect = 0.027
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 310 RPYDCDVCGAKFTQVGDMRRHRKKH 334
+ + C C +F + + +H K H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 39.9 bits (94), Expect = 9e-06
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 118 YNCTVCGKAFSRKSFVTTHMRVHT 141
Y C CGKAFS+ S + H R+HT
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 36.8 bits (86), Expect = 1e-04
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 88 RPYICDWCGVGFRSKANLLQHQPVHT 113
+PY C CG F + L+ HQ +HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 31.0 bits (71), Expect = 0.014
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 177 GKAFSRKSFVTTHMRVHT 194
GKAFS+ S + H R+HT
Sbjct: 9 GKAFSQNSGLINHQRIHT 26
Score = 28.3 bits (64), Expect = 0.12
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 310 RPYDCDVCGAKFTQVGDMRRHRKKH 334
+PY C CG F+Q + H++ H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 25.6 bits (57), Expect = 1.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 61 PWCCRFCNKRMMTKLSLGIHERIHT 85
P+ C C K L H+RIHT
Sbjct: 2 PYKCLECGKAFSQNSGLINHQRIHT 26
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 39.7 bits (93), Expect = 1e-05
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 64 CRFCNKRMMTKLSLGIHERIHTGQRPYICDW 94
C K K L H ++H+ R YIC++
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 37.8 bits (88), Expect = 6e-05
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 119 NCTVCGKAFSRKSFVTTHMRVHTG 142
CGK+F+ K + HM++H+
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSD 28
Score = 37.0 bits (86), Expect = 1e-04
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 90 YICDW--CGVGFRSKANLLQHQPVHTGQRKYNC 120
+ C CG F K +L +H +H+ R Y C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 32.8 bits (75), Expect = 0.004
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
GK+F+ K + HM++H+
Sbjct: 10 GKSFNFKKHLKEHMKLHSD 28
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 39.6 bits (93), Expect = 1e-05
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
+ + CT C K++SR + TH+R HTG
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 36.2 bits (84), Expect = 2e-04
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 88 RPYICDW--CGVGFRSKANLLQHQPVHTGQ 115
+P+ C + C + NL H HTG+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 34.2 bits (79), Expect = 9e-04
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
K++SR + TH+R HTG
Sbjct: 11 RKSYSRLENLKTHLRSHTG 29
Score = 26.9 bits (60), Expect = 0.37
Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Query: 61 PWCC--RFCNKRMMTKLSLGIHERIHTGQ 87
P C C K +L H R HTG+
Sbjct: 2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 26.1 bits (58), Expect = 0.68
Identities = 5/27 (18%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 310 RPYDCDV--CGAKFTQVGDMRRHRKKH 334
+P+ C C ++++ +++ H + H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 39.2 bits (92), Expect = 2e-05
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
R + CT CGK F+R + H R HTG
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 36.9 bits (86), Expect = 1e-04
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 88 RPYICDW--CGVGFRSKANLLQHQPVHTGQR 116
RP++C W CG F L +H+ HTG++
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 33.8 bits (78), Expect = 0.002
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
GK F+R + H R HTG
Sbjct: 11 GKRFTRSDELQRHKRTHTG 29
Score = 28.4 bits (64), Expect = 0.12
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 61 PWCCRF--CNKRMMTKLSLGIHERIHTGQR 88
P+ C + C KR L H+R HTG++
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.9 bits (60), Expect = 0.36
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 310 RPYDCDV--CGAKFTQVGDMRRHRKKH 334
RP+ C CG +FT+ +++RH++ H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 39.2 bits (92), Expect = 2e-05
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
R Y C V C + FSR + +T H+R+HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 35.4 bits (82), Expect = 4e-04
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 88 RPYICDW--CGVGFRSKANLLQHQPVHTG 114
RPY C C F A+L +H +HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 33.8 bits (78), Expect = 0.002
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
+ FSR + +T H+R+HTG
Sbjct: 11 DRRFSRSADLTRHIRIHTG 29
Score = 25.7 bits (57), Expect = 0.90
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 310 RPYDCDV--CGAKFTQVGDMRRHRKKH 334
RPY C V C +F++ D+ RH + H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
Score = 25.7 bits (57), Expect = 1.2
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 61 PWCCRF--CNKRMMTKLSLGIHERIHTG 86
P+ C C++R L H RIHTG
Sbjct: 2 PYACPVESCDRRFSRSADLTRHIRIHTG 29
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 38.8 bits (91), Expect = 3e-05
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTGK 143
R Y+C C KAF R + H + H K
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 33.5 bits (77), Expect = 0.002
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 88 RPYICDW--CGVGFRSKANLLQHQPVHTGQ 115
RPY CD C F +L++H+ H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 32.7 bits (75), Expect = 0.003
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 177 GKAFSRKSFVTTHMRVHTGK 196
KAF R + H + H K
Sbjct: 12 DKAFVRNHDLIRHKKSHQEK 31
Score = 28.8 bits (65), Expect = 0.097
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 309 DRPYDCDV--CGAKFTQVGDMRRHRKKH 334
DRPY CD C F + D+ RH+K H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28
Score = 25.4 bits (56), Expect = 1.4
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 61 PWCCRF--CNKRMMTKLSLGIHERIHTGQ 87
P+ C C+K + L H++ H +
Sbjct: 3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 38.8 bits (90), Expect = 3e-05
Identities = 6/40 (15%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 105 LLQHQPVHTGQRKYNCTVC--GKAFSRKSFVTTHMRVHTG 142
+ + + C K F R+ + +H++ H
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 28.0 bits (62), Expect = 0.26
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
K F R+ + +H++ H
Sbjct: 27 TKTFKRRYNIRSHIQTHLE 45
Score = 26.0 bits (57), Expect = 1.3
Identities = 7/31 (22%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 306 HHCDRPYDCDVCGA--KFTQVGDMRRHRKKH 334
D+ ++C G F + ++R H + H
Sbjct: 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 24.9 bits (54), Expect = 3.6
Identities = 5/25 (20%), Positives = 9/25 (36%)
Query: 64 CRFCNKRMMTKLSLGIHERIHTGQR 88
C K + ++ H + H R
Sbjct: 23 FPGCTKTFKRRYNIRSHIQTHLEDR 47
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 35.8 bits (83), Expect = 3e-04
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHTG 142
+ + CT CGK FS + TH+R+HTG
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 34.7 bits (80), Expect = 7e-04
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 88 RPYICDW--CGVGFRSKANLLQHQPVHTGQ 115
+P+ C + CG F NL H +HTG
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 30.4 bits (69), Expect = 0.023
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
GK FS + TH+R+HTG
Sbjct: 11 GKRFSLDFNLRTHVRIHTG 29
Score = 24.6 bits (54), Expect = 2.3
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 61 PWCC--RFCNKRMMTKLSLGIHERIHTGQ 87
P+ C C KR +L H RIHTG
Sbjct: 2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 24.6 bits (54), Expect = 2.8
Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 310 RPYDCDV--CGAKFTQVGDMRRHRKKH 334
+P+ C CG +F+ ++R H + H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 35.4 bits (81), Expect = 4e-04
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 118 YNCTVCGKAFSRKSFVTTHMRVHTG 142
+ C VCGK FSRK + THMR HTG
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 28.1 bits (62), Expect = 0.17
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 177 GKAFSRKSFVTTHMRVHTG 195
GK FSRK + THMR HTG
Sbjct: 8 GKCFSRKDKLKTHMRCHTG 26
Score = 24.3 bits (52), Expect = 3.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 89 PYICDWCGVGFRSKANLLQHQPVHTG 114
P+ C+ CG F K L H HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 23.1 bits (49), Expect = 9.8
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 311 PYDCDVCGAKFTQVGDMRRHRKKH 334
P+ C+VCG F++ ++ H + H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 33.5 bits (77), Expect = 0.002
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 116 RKYNCTV--CGKAFSRKSFVTTHMRVHT 141
R Y C C K F++ + + +H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 28.9 bits (65), Expect = 0.078
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 310 RPYDCDV--CGAKFTQVGDMRRHRKKH 334
RPY C C KF Q +++ H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 27.7 bits (62), Expect = 0.22
Identities = 4/18 (22%), Positives = 10/18 (55%)
Query: 177 GKAFSRKSFVTTHMRVHT 194
K F++ + + +H+ H
Sbjct: 11 NKKFAQSTNLKSHILTHA 28
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 32.5 bits (74), Expect = 0.004
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 309 DRPYDCDVCGAKFTQVGDMRRHRKKH 334
++P+ CD+CG KF + + +RH K H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 28.6 bits (64), Expect = 0.086
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 115 QRKYNCTVCGKAFSRKSFVTTHMRVH 140
++ + C +CG+ F+R H ++H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 22.9 bits (49), Expect = 9.7
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 87 QRPYICDWCGVGFRSKANLLQHQPVH 112
++P+ CD CG F +H +H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 29.2 bits (65), Expect = 0.069
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 115 QRKYNCTVCGKAFSRKSFVTTHMRVHTGKLT 145
++ Y+C VCG F RK ++ H+R H G +
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 31
Score = 26.5 bits (58), Expect = 0.61
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 309 DRPYDCDVCGAKFTQVGDMRRHRKKHD 335
++PY C VCG +F + M H + HD
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHD 27
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.4 bits (63), Expect = 0.10
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 116 RKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
R + C CGKAF S + H VHTG+
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 28.4 bits (63), Expect = 0.13
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 88 RPYICDWCGVGFRSKANLLQHQPVHTGQ 115
R ++C CG F + L +HQ VHTG+
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 28.1 bits (63), Expect = 0.18
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 115 QRKYNCTVCGKAFSRKSFVTTHMRVH 140
R Y C+ C + F + HM VH
Sbjct: 3 PRSYTCSFCKREFRSAQALGGHMNVH 28
Score = 25.1 bits (55), Expect = 2.3
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 64 CRFCNKRMMTKLSLGIHERIHTGQR 88
C FC + + +LG H +H R
Sbjct: 8 CSFCKREFRSAQALGGHMNVHRRDR 32
Score = 24.3 bits (53), Expect = 4.7
Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 4/28 (14%)
Query: 310 RPYDCDVCGAKFTQV----GDMRRHRKK 333
R Y C C +F G M HR+
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRD 31
Score = 23.5 bits (51), Expect = 6.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 87 QRPYICDWCGVGFRSKANLLQHQPVHTGQR 116
R Y C +C FRS L H VH R
Sbjct: 3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR 32
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 27.9 bits (62), Expect = 0.23
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 309 DRPYDCDV--CGAKFTQVGDMRRHRKKHD 335
D+P+ C CG +FT + H+ KH+
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 27.8 bits (61), Expect = 0.26
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 310 RPYDCDVCGAKFTQVGDMRRHRKKHDENGGSAK 342
+PY+C++C +F RH ++ +AK
Sbjct: 4 KPYECNICAKRFMWRDSFHRHVTSCTKSYEAAK 36
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 26.8 bits (59), Expect = 0.50
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 117 KYNCTVCGKAFSRKSFVTTHMRVHTG 142
KY C CG + S + H+R HT
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTD 26
Score = 25.2 bits (55), Expect = 1.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 90 YICDWCGVGFRSKANLLQHQPVHTGQR 116
YIC+ CG+ + + L +H HT R
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 26.5 bits (58), Expect = 0.52
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 115 QRKYNCTVCGKAFSRKSFVTTHMRVHTG 142
+R + C +C A S +T H+R HTG
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTG 28
Score = 24.2 bits (52), Expect = 4.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 87 QRPYICDWCGVGFRSKANLLQHQPVHTG 114
+RP+ C C R+ + L H HTG
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTG 28
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 26.2 bits (57), Expect = 0.66
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 115 QRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
++ + C+VC + F R+ + HM HTG+
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTGE 30
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 26.2 bits (58), Expect = 0.74
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 119 NCTVCGKAFSRKSFVTTHMRVHTG 142
C+ + F + + HMR HTG
Sbjct: 9 GCSRELRPFKAQYMLVVHMRRHTG 32
Score = 24.7 bits (54), Expect = 3.2
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 176 GGKAFSRKSFVTTHMRVHTG 195
+ F + + HMR HTG
Sbjct: 13 ELRPFKAQYMLVVHMRRHTG 32
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 26.1 bits (57), Expect = 0.76
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 89 PYICDWCGVGFRSKANLLQHQPVHTGQRK 117
PY C +C F++K NL +H +K
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMKSKAHSKK 29
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 25.8 bits (56), Expect = 0.86
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 64 CRFCNKRMMTKLSLGIHERIHTGQR 88
C C+K+ ++K L +H R HTG++
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 24.3 bits (52), Expect = 3.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 120 CTVCGKAFSRKSFVTTHMRVHTGK 143
C C K F K ++ H R HTG+
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGE 26
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 25.9 bits (56), Expect = 0.90
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 118 YNCTVCGKAFSRKSFVTTHMRVH 140
Y C +C ++F KS ++ H RVH
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 25.4 bits (55), Expect = 1.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 118 YNCTVCGKAFSRKSFVTTHMRV 139
Y C C K F+RK +T H+++
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKI 23
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 25.4 bits (55), Expect = 1.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 87 QRPYICDWCGVGFRSKANLLQHQPVHTGQRKY 118
++ C+ CG FR +L +H+ H+G++ Y
Sbjct: 3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 23.9 bits (51), Expect = 6.6
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 310 RPYDCDVCGAKFTQVGDMRRHRKKH 334
+ C++CG F V + RH+ H
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSH 28
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 124
Score = 27.0 bits (59), Expect = 2.0
Identities = 12/87 (13%), Positives = 24/87 (27%), Gaps = 18/87 (20%)
Query: 9 FRQVINLLKHRREHGGNLSFDNCHICKETFYKHSELVRHLEREHNIPRSESSPWCCRFCN 68
++++ L+ R++ + C +C E C C
Sbjct: 29 IGRLVDRLETMRKNVAGDGVNRCILCGEQLGMLGSASVV----------------CEDCK 72
Query: 69 KRMMTKLSLGIHERIHTGQRPYICDWC 95
K + TK + +C C
Sbjct: 73 KNVCTKCGVETSNNRPHPVW--LCKIC 97
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 24.8 bits (54), Expect = 2.4
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 118 YNCTVCGKAFSRKSFVTTHM-RVHTG 142
Y C +C +AF+R+ + H ++H+G
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQKIHSG 27
Score = 23.6 bits (51), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 311 PYDCDVCGAKFTQVGDMRRHRKK 333
PY C +C FT+ + RH +K
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQK 23
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 25.5 bits (55), Expect = 2.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 309 DRPYDCDVCGAKFTQVGDMRRH 330
++P C +C A Q ++RRH
Sbjct: 22 EQPATCPICYAVIRQSRNLRRH 43
>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different
fingers {Fruit fly (Drosophila melanogaster) [TaxId:
7227]}
Length = 36
Score = 25.0 bits (54), Expect = 2.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 90 YICDWCGVGFRSKANLLQHQPVHTGQR 116
++C CG+ F S + L HQ + R
Sbjct: 9 FMCLPCGIAFSSPSTLEAHQAYYCSHR 35
>d1rhya2 d.14.1.9 (A:94-187) Imidazole glycerol phosphate
dehydratase {Fungus (Filobasidiella neoformans) [TaxId:
5207]}
Length = 94
Score = 26.4 bits (58), Expect = 2.8
Identities = 8/54 (14%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Query: 94 WCGVGFRSKANLLQHQPVHT----GQRKYNCTVCGKAFSRKSFVTTHMRVHTGK 143
+ S+ + H P + ++F+ + VT H+ G+
Sbjct: 18 RAVIDISSRPYFMCHLPFTREKVGDLSTEMVSHLLQSFAFAAGVTLHIDSIRGE 71
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 25.3 bits (55), Expect = 3.0
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 312 YDCDVCGAKFTQVGDMRRHRKKHDENG 338
C +CG FT +R+H +H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQHGVTS 33
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 24.0 bits (52), Expect = 4.6
Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 310 RPYDCDV--CGAKFTQVGDMRRHRKKH 334
+PY C + C ++T +R+H K
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTV 27
>d1wjpa1 g.37.1.1 (A:1-42) Zinc finger protein 295, ZNF295 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 24.3 bits (52), Expect = 5.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 64 CRFCNKRMMTKLSLGIHERI 83
CR CN ++ + L G HER+
Sbjct: 19 CRLCNAKLSSLLEQGSHERL 38
>d1urja_ e.58.1.1 (A:) Infected cell protein 8, ICP8 {Herpes simplex
virus 1 [TaxId: 10298]}
Length = 1122
Score = 26.3 bits (58), Expect = 8.2
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 276 GKPEDFIPD--VFQAEFSKEN-DKLLSYLEFCDHH 307
G ++F + + FS K+L YLE CD
Sbjct: 433 GGTQEFAGEHLAMLSGFSPALLAKMLFYLERCDGA 467
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 25.9 bits (57), Expect = 8.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 90 YICDWCGVGFRSKANLLQHQ 109
Y+C++C +S+ L QH
Sbjct: 32 YLCEFCLKYMKSRTILQQHM 51
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.136 0.428
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,628,944
Number of extensions: 75170
Number of successful extensions: 493
Number of sequences better than 10.0: 1
Number of HSP's gapped: 479
Number of HSP's successfully gapped: 166
Length of query: 434
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 346
Effective length of database: 1,199,356
Effective search space: 414977176
Effective search space used: 414977176
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (24.8 bits)