BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8252
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DI51|NDK6_DANRE Nucleoside diphosphate kinase 6 OS=Danio rerio GN=nme6 PE=2 SV=1
Length = 175
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 6/109 (5%)
Query: 1 MAAIHEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEI 60
+ A+H+K ++N I I+ K +E+FY+EH +FF+ RLV M SGP
Sbjct: 25 LEALHQKILENFI------IIRKKDLIWRKADSEMFYAEHSGRFFFQRLVEFMSSGPMRA 78
Query: 61 NILARENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
ILARE+AIT WR ++GPTKV+ ARFS P ++RG YG++DTRN HGS+
Sbjct: 79 YILAREDAITHWRTMMGPTKVFRARFSSPETLRGKYGLTDTRNTTHGSD 127
>sp|O75414|NDK6_HUMAN Nucleoside diphosphate kinase 6 OS=Homo sapiens GN=NME6 PE=1 SV=3
Length = 186
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 66/103 (64%)
Query: 7 KAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARE 66
+A+ ILSN+F IV K+ + FY EH+ +FFY RLV M SGP ILA +
Sbjct: 30 EAVHQQILSNKFLIVRMRELLWRKEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHK 89
Query: 67 NAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
+AI WR L+GPT+V+ AR P SIRG +G++DTRN HGS+
Sbjct: 90 DAIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTHGSD 132
>sp|O88425|NDK6_MOUSE Nucleoside diphosphate kinase 6 OS=Mus musculus GN=Nme6 PE=2 SV=1
Length = 189
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 65/103 (63%)
Query: 7 KAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARE 66
+A+ ILSN+F IV + + FY EH+ +FFY RLV M SGP ILA +
Sbjct: 30 EAVHQQILSNKFLIVRTRELQWKLEDCRRFYREHEGRFFYQRLVEFMTSGPIRAYILAHK 89
Query: 67 NAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
+AI WR L+GPT+V+ AR+ P SIRG G++DTRN HGS+
Sbjct: 90 DAIQLWRTLMGPTRVFRARYIAPDSIRGSLGLTDTRNTTHGSD 132
>sp|O88426|NDK6_RAT Nucleoside diphosphate kinase 6 (Fragment) OS=Rattus norvegicus
GN=Nme6 PE=2 SV=1
Length = 175
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 63/103 (61%)
Query: 7 KAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARE 66
+A+ ILSN+F IV + FY EH+ +FFY RLV M SGP ILA +
Sbjct: 19 EAVHQQILSNKFLIVRMRELLWKPEDCRRFYREHEGRFFYQRLVEFMTSGPIRAYILAHK 78
Query: 67 NAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
+AI WR L+GPT+V+ AR P SIRG G++DTRN HGS+
Sbjct: 79 DAIQLWRTLMGPTRVFRARHIAPDSIRGSLGLTDTRNTTHGSD 121
>sp|B3DL53|NDK6_XENTR Nucleoside diphosphate kinase 6 OS=Xenopus tropicalis GN=nme6 PE=2
SV=1
Length = 179
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 63/103 (61%)
Query: 7 KAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARE 66
+A+ IL N F I+ ++ FY EHK +FFY RLV M SGP + ILA E
Sbjct: 29 EAVHQKILENNFLIIRHKELHWRSTDSQRFYCEHKGRFFYQRLVEFMSSGPMQAYILAHE 88
Query: 67 NAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
+A+ WR L+GPTKV+ AR P ++RG G++DTRN HGS+
Sbjct: 89 DAVQLWRNLMGPTKVFRARIVAPGTVRGDLGLTDTRNTTHGSD 131
>sp|P56597|NDK5_HUMAN Nucleoside diphosphate kinase homolog 5 OS=Homo sapiens GN=NME5
PE=2 SV=1
Length = 212
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 60/103 (58%)
Query: 6 EKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAR 65
E+ IQ++IL + F IV+ ++ +Q FY E K F+ L M SGP ILAR
Sbjct: 27 EEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILAR 86
Query: 66 ENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGS 108
AI+ W ELLGP +A+ +HP S+R +YG D RNA HGS
Sbjct: 87 HKAISYWLELLGPNNSLVAKETHPDSLRAIYGTDDLRNALHGS 129
>sp|Q99MH5|NDK5_MOUSE Nucleoside diphosphate kinase homolog 5 OS=Mus musculus GN=Nme5
PE=2 SV=2
Length = 211
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%)
Query: 6 EKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAR 65
E+ IQ++IL + F I++ ++ + FY E K F+ L M SGP ILAR
Sbjct: 27 EEEIQDIILGSGFTIIQRRKLHLSPEHCSNFYVEQYGKMFFPNLTAYMSSGPLVAMILAR 86
Query: 66 ENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGS 108
AI+ W+EL+GP+ +A+ +HP S+R +YG + RNA HGS
Sbjct: 87 HKAISYWKELMGPSNSLVAKETHPDSLRAIYGTDELRNALHGS 129
>sp|Q1MPA2|NDK_LAWIP Nucleoside diphosphate kinase OS=Lawsonia intracellularis (strain
PHE/MN1-00) GN=ndk PE=3 SV=1
Length = 138
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 8 AIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAREN 67
AI N+I N F+I M +QQ E FYS H+++ F+N LV MISGP IL EN
Sbjct: 20 AIINMIEKNDFYISAMKMLQMNRQQAEGFYSVHRERPFFNELVDYMISGPIVSLILTGEN 79
Query: 68 AITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
A+T++REL+G T + + +IR + IS NA HGS+
Sbjct: 80 AVTRYRELMGATN---PQNAQEGTIRKSFAISLMENAVHGSD 118
>sp|Q603C1|NDK_METCA Nucleoside diphosphate kinase OS=Methylococcus capsulatus (strain
ATCC 33009 / NCIMB 11132 / Bath) GN=ndk PE=3 SV=1
Length = 143
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 18 FHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLG 77
IV + ++++Q E FY+ H+++ F+N LV+ MISGP I +L ENAI K REL+G
Sbjct: 32 LRIVAAKMAQLSREQAEGFYAVHRERPFFNDLVSFMISGPVMIQVLEGENAIAKNRELMG 91
Query: 78 PTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
T R + P +IR + +S NA HGS+
Sbjct: 92 ATN---PRDAAPGTIRADFAVSIDENAVHGSD 120
>sp|Q9QXL7|NDK7_RAT Nucleoside diphosphate kinase 7 OS=Rattus norvegicus GN=Nme7 PE=1
SV=1
Length = 395
Score = 72.4 bits (176), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%)
Query: 9 IQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENA 68
I +I + F I + +++++ F+ +H + FYN L+ + SGP + R++A
Sbjct: 128 IIEMINKSGFTITKLRMMTLSRKEAADFHVDHHSRPFYNELIQFITSGPVIAMEILRDDA 187
Query: 69 ITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
I +W+ LLGP IAR P S+R ++G RNAAHGS+
Sbjct: 188 ICEWKRLLGPANSGIARSEAPGSVRALFGTDGIRNAAHGSD 228
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 28 MTKQQTEIFYSEHKDKFF-YNRLVTQMISGPSEINILARENAITKWRELLGPTKVYIARF 86
M + E FY +K YN +VT++ SGP + + N +RE GP+ IAR
Sbjct: 295 MDRANVEEFYEVYKGVLSDYNDMVTELYSGPCVAIEIQQSNPTKTFREFCGPSDPEIARH 354
Query: 87 SHPYSIRGMYGISDTRNAAHGSEWLRD 113
P ++R +G + +NA H ++ D
Sbjct: 355 LRPETLRANFGKTKVQNAVHCTDLPED 381
>sp|P90666|TXND3_HELCR Thioredoxin domain-containing protein 3 homolog OS=Heliocidaris
crassispina GN=NME8 PE=1 SV=1
Length = 837
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 56/107 (52%)
Query: 2 AAIHEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEIN 61
A H++AI I F+I + K+ Y EH+ K FY L+ M SG S +
Sbjct: 502 AGEHKEAIIEKIKEAGFNISLQRDVELNKELASKLYLEHEGKEFYENLIDHMSSGLSMVM 561
Query: 62 ILARENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGS 108
+L+RE+A+ WR L+GPT AR P S+R + G +NA HGS
Sbjct: 562 VLSREDAVDGWRTLMGPTDPDYAREHAPESLRALLGKDVLQNAVHGS 608
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 3 AIHEKAIQNVILSNQFHIVESLTT---AMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSE 59
A+ + ++I + H E LTT +T+ + FY +H+++ + LVT M SGPS+
Sbjct: 212 AVANGHVDSIIAKIEEHGFEILTTEDKTLTEDEAREFYKQHEEEEHFEVLVTFMASGPSK 271
Query: 60 INILAR----ENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
I +L R E +++ R LLGP + +A+ P S+R +G NA HG++
Sbjct: 272 ILVLTRGDTGEGVVSEVRNLLGPKDIEVAKEEAPDSLRAQFGTDKKMNAMHGAD 325
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H+ + I F + +T+ Q + FY E + + L+ +M SG LA
Sbjct: 370 HKDEMLQKIQEAGFEVCLQKMVQLTEDQAKEFYKEQEGTPHFEDLIREMTSGEVLALGLA 429
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTR-NAAHGSE 109
+E+AI WRE +GPT + A+ P S+R Y I DT+ N HGS+
Sbjct: 430 KESAIQSWREFIGPTTIDEAKEKAPDSLRAQYSIPDTQVNVVHGSD 475
>sp|A7ZC05|NDK_CAMC1 Nucleoside diphosphate kinase OS=Campylobacter concisus (strain
13826) GN=ndk PE=3 SV=1
Length = 137
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 15 SNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRE 74
SN I + ++K + FY+ HKD+ F+N LV M+SGP + +L ENA+ K RE
Sbjct: 27 SNGLRIAAAKKIKLSKCDAKAFYAVHKDRPFFNDLVDFMVSGPVVVMVLEGENAVAKNRE 86
Query: 75 LLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
L+G T + + P +IR + S NA HGS+ L + +E
Sbjct: 87 LMGATN---PKEAAPGTIRADFADSIDANAVHGSDSLENAVNE 126
>sp|Q9QXL8|NDK7_MOUSE Nucleoside diphosphate kinase 7 OS=Mus musculus GN=Nme7 PE=2 SV=1
Length = 395
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 56/101 (55%)
Query: 9 IQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENA 68
I +I + F I + +T+++ F+ +H + FYN L+ + SGP + R++A
Sbjct: 128 IIEMINKSGFTITKLRMMTLTRKEAADFHVDHHSRPFYNELIQFITSGPVIAMEILRDDA 187
Query: 69 ITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
I +W+ LLGP ++R P SIR ++G RNAAHG +
Sbjct: 188 ICEWKRLLGPANSGLSRTDAPGSIRALFGTDGVRNAAHGPD 228
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 28 MTKQQTEIFYSEHKDKFF-YNRLVTQMISGPSEINILARENAITKWRELLGPTKVYIARF 86
+ + E FY +K YN +VT++ SGP + + N +RE GP IAR
Sbjct: 295 LDRANVEEFYEVYKGVVSEYNDMVTELCSGPCVAIEIQQSNPTKTFREFCGPADPEIARH 354
Query: 87 SHPYSIRGMYGISDTRNAAHGSEWLRD 113
P ++R ++G + +NA H ++ D
Sbjct: 355 LRPETLRAIFGKTKVQNAVHCTDLPED 381
>sp|A0KXI2|NDK_SHESA Nucleoside diphosphate kinase OS=Shewanella sp. (strain ANA-3)
GN=ndk PE=3 SV=1
Length = 143
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV + +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ L E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAESIDENAAHGSDALESAARE 128
>sp|Q0HVN6|NDK_SHESR Nucleoside diphosphate kinase OS=Shewanella sp. (strain MR-7)
GN=ndk PE=3 SV=1
Length = 143
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV + +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ L E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAQSIDENAAHGSDSLESAARE 128
>sp|Q0HJE6|NDK_SHESM Nucleoside diphosphate kinase OS=Shewanella sp. (strain MR-4)
GN=ndk PE=3 SV=1
Length = 143
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV + +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ L E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAQSIDENAAHGSDSLESAARE 128
>sp|Q5E776|NDK_VIBF1 Nucleoside diphosphate kinase OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=ndk PE=3 SV=1
Length = 144
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 8 AIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAREN 67
AI I IV + +TK+Q E FY+EH+ K F++ LV M+SGP + +L EN
Sbjct: 22 AIYRRIEKTGMQIVAAKMLRLTKEQAEGFYAEHEGKEFFDELVAYMMSGPVMVQVLEGEN 81
Query: 68 AITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
A+ ++REL+G T A S+R Y IS N+ HG++
Sbjct: 82 AVVRYRELMGKTNPEEAACG---SLRADYAISMRYNSVHGAD 120
>sp|Q8EEU0|NDK_SHEON Nucleoside diphosphate kinase OS=Shewanella oneidensis (strain
MR-1) GN=ndk PE=3 SV=1
Length = 143
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV + +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ L E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAQSIDENAAHGSDSLASAERE 128
>sp|B5FAW8|NDK_VIBFM Nucleoside diphosphate kinase OS=Vibrio fischeri (strain MJ11)
GN=ndk PE=3 SV=1
Length = 144
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 8 AIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAREN 67
AI I IV + +TK+Q E FY+EH+ K F++ LV M+SGP + +L EN
Sbjct: 22 AIYRRIEKTGMQIVAAKMLRLTKEQAEGFYAEHEGKEFFDELVAYMMSGPVMVQVLEGEN 81
Query: 68 AITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
A+ ++REL+G T A S+R Y IS N+ HG++
Sbjct: 82 AVVRYRELMGKTNPEEAACG---SLRADYAISMRYNSVHGAD 120
>sp|A9L3Q1|NDK_SHEB9 Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS195)
GN=ndk PE=3 SV=1
Length = 143
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV S +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVASKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ + E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAESIDENAAHGSDAVESAARE 128
>sp|A6WNX6|NDK_SHEB8 Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS185)
GN=ndk PE=3 SV=1
Length = 143
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV S +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVASKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ + E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAESIDENAAHGSDAVESAARE 128
>sp|A3D569|NDK_SHEB5 Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=ndk PE=3 SV=1
Length = 143
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV S +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVASKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ + E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAESIDENAAHGSDAVESAARE 128
>sp|B8E9E1|NDK_SHEB2 Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS223)
GN=ndk PE=3 SV=1
Length = 143
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV S +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVASKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ + E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAESIDENAAHGSDAVESAARE 128
>sp|Q87B35|NDK_XYLFT Nucleoside diphosphate kinase OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=ndk PE=3 SV=1
Length = 141
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 18 FHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLG 77
IV + +++++ E FY+ H+D+ F+N LV MISGP I +L ENA+ + RELLG
Sbjct: 32 LKIVAAKYKQLSRREAEGFYAVHRDRPFFNALVEFMISGPVMIQVLESENAVARHRELLG 91
Query: 78 PTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRD 113
T + + P +IR + S NAAHGS+ + +
Sbjct: 92 ATN---PKDAAPGTIRADFAESIEANAAHGSDSVEN 124
>sp|B0U495|NDK_XYLFM Nucleoside diphosphate kinase OS=Xylella fastidiosa (strain M12)
GN=ndk PE=3 SV=1
Length = 141
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 18 FHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLG 77
IV + +++++ E FY+ H+D+ F+N LV MISGP I +L ENA+ + RELLG
Sbjct: 32 LKIVAAKYKQLSRREAEGFYAVHRDRPFFNALVEFMISGPVMIQVLESENAVARHRELLG 91
Query: 78 PTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRD 113
T + + P +IR + S NAAHGS+ + +
Sbjct: 92 ATN---PKDAAPGTIRADFAESIEANAAHGSDSVEN 124
>sp|B2I7V6|NDK_XYLF2 Nucleoside diphosphate kinase OS=Xylella fastidiosa (strain M23)
GN=ndk PE=3 SV=1
Length = 141
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 18 FHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLG 77
IV + +++++ E FY+ H+D+ F+N LV MISGP I +L ENA+ + RELLG
Sbjct: 32 LKIVAAKYKQLSRREAEGFYAVHRDRPFFNALVEFMISGPVMIQVLESENAVARHRELLG 91
Query: 78 PTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRD 113
T + + P +IR + S NAAHGS+ + +
Sbjct: 92 ATN---PKDAAPGTIRADFAESIEANAAHGSDSVEN 124
>sp|Q95YJ5|TXND3_CIOIN Thioredoxin domain-containing protein 3 homolog OS=Ciona
intestinalis GN=CiIC3 PE=2 SV=1
Length = 653
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H+ +I I F I +T++Q E FYSEHKD ++ LV QM GP LA
Sbjct: 339 HKDSILQKIDEAGFKIAMQKEMVLTREQAESFYSEHKDTDYFEPLVKQMTCGPVLALCLA 398
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTR-NAAHGSE 109
++A+ WR +LGP V A P S+R + + + N HGS+
Sbjct: 399 HDDAVDHWRSMLGPKVVADAVEEQPDSLRAQFRVEEAEVNMLHGSD 444
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 28 MTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLGPTKVYIARFS 87
++K+ Y + +Y+ L+ M SGP+ + +L+ ENA+ K R+++GPT +A+ S
Sbjct: 496 LSKEIASEIYKSKEGSEYYDHLIDHMTSGPTLMMVLSAENAVEKLRDIMGPTDPEVAKES 555
Query: 88 HPYSIRGMYGISDTRNAAH 106
HP S+R M+ S NA H
Sbjct: 556 HPESLRAMFAKSILENAIH 574
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 28 MTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAR----ENAITKWRELLGPTKVYI 83
+T ++ FY +++ ++++L+ + SGP + +L + E +T WR+++GP +
Sbjct: 194 LTVEEARDFYKNKEEEEYFDQLIDYVTSGPCRVLVLTKGESGEGVVTLWRDIIGPFDAAV 253
Query: 84 ARFSHPYSIRGMYGISDTRNAAHGS 108
A+ +P S+R +YG T NA HGS
Sbjct: 254 AKEENPDSLRAIYGTDATSNALHGS 278
>sp|A1RJ60|NDK_SHESW Nucleoside diphosphate kinase OS=Shewanella sp. (strain W3-18-1)
GN=ndk PE=3 SV=1
Length = 143
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV + +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ + E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAESIDENAAHGSDAVESAARE 128
>sp|A4Y7C9|NDK_SHEPC Nucleoside diphosphate kinase OS=Shewanella putrefaciens (strain
CN-32 / ATCC BAA-453) GN=ndk PE=3 SV=1
Length = 143
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N + IV + +TK+Q E FY+EH ++ F+ LV M SGP + +L
Sbjct: 19 HIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE+LG T A P +IR + S NAAHGS+ + E
Sbjct: 79 GENAVLAHREILGATNPAQAA---PGTIRADFAESIDENAAHGSDAVESAARE 128
>sp|A5UI22|NDK_HAEIG Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain
PittGG) GN=ndk PE=3 SV=1
Length = 140
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 16 NQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWREL 75
N F I+ S +T++Q E FY+EH+ K F+ LV M+S P +++L +ENA+ +R L
Sbjct: 29 NGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTL 88
Query: 76 LGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
+G T A +IR + +S N+ HGS+ + + N E
Sbjct: 89 IGTTNPETA---EEGTIRKDFALSQRENSVHGSDSIENANRE 127
>sp|A5UDJ8|NDK_HAEIE Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain
PittEE) GN=ndk PE=3 SV=1
Length = 140
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 16 NQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWREL 75
N F I+ S +T++Q E FY+EH+ K F+ LV M+S P +++L +ENA+ +R L
Sbjct: 29 NGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTL 88
Query: 76 LGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
+G T A +IR + +S N+ HGS+ + + N E
Sbjct: 89 IGTTNPETA---EEGTIRKDFALSQRENSVHGSDSIENANRE 127
>sp|Q4QM32|NDK_HAEI8 Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain
86-028NP) GN=ndk PE=3 SV=1
Length = 141
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 16 NQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWREL 75
N F I+ S +T++Q E FY+EH+ K F+ LV M+S P +++L +ENA+ +R L
Sbjct: 30 NGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTL 89
Query: 76 LGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
+G T A +IR + +S N+ HGS+ + + N E
Sbjct: 90 IGTTNPETA---EEGTIRKDFALSQRENSVHGSDSIENANRE 128
>sp|Q12LK6|NDK_SHEDO Nucleoside diphosphate kinase OS=Shewanella denitrificans (strain
OS217 / ATCC BAA-1090 / DSM 15013) GN=ndk PE=3 SV=1
Length = 143
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
H AI N S I+ S +TK+Q E FY+EH + F+ LV+ M SGP + +L
Sbjct: 19 HIGAIYNRFESAGLKIIASKMVHLTKEQAEGFYAEHSARPFFGALVSFMTSGPVMVQVLE 78
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
ENA+ RE++G T A ++RG Y S NA HGS+ L E
Sbjct: 79 GENAVLANREIMGATNPAEAARG---TLRGDYAASIDENAVHGSDALESAARE 128
>sp|Q5GRR9|NDK_WOLTR Nucleoside diphosphate kinase OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=ndk PE=3 SV=1
Length = 139
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 9 IQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENA 68
I + I + I+ +TK+Q E+FY+ HKD+ F+ LV M SGP + +L ENA
Sbjct: 23 INSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENA 82
Query: 69 ITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
I+K+R+++G T + + +IRG + N HGS+ L + + E
Sbjct: 83 ISKYRQIMGATD---PKQADKGTIRGDFADDVNENRVHGSDSLENAHKE 128
>sp|Q1H0U5|NDK_METFK Nucleoside diphosphate kinase OS=Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875) GN=ndk PE=3 SV=1
Length = 141
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 18 FHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLG 77
I+ S +++ E FY+ HK++ F+N LV MISGP + +L ENA+ K REL+G
Sbjct: 32 LKIIASKMVQLSQADAEGFYAVHKERPFFNDLVKFMISGPVVVQVLEGENAVLKHRELMG 91
Query: 78 PTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRD 113
T + + P +IR + S NA HGS+ L +
Sbjct: 92 ATD---PKKAEPGTIRADFADSIDANAVHGSDSLEN 124
>sp|B8EJZ0|NDK_METSB Nucleoside diphosphate kinase OS=Methylocella silvestris (strain
BL2 / DSM 15510 / NCIMB 13906) GN=ndk PE=3 SV=1
Length = 140
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 8 AIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAREN 67
AI +I I+ +T+ Q E FY+ HK++ F+ LV MISGP + +L EN
Sbjct: 22 AINALIEKAGLRIIAQKRVQITRPQAETFYAVHKERPFFGALVDTMISGPVVVQVLEGEN 81
Query: 68 AITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
AI +R++LG T A P +IR + +S N+ HGS+
Sbjct: 82 AIKAYRDVLGATDPAKA---APGTIRKEFALSVGENSGHGSD 120
>sp|Q5WWH5|NDK_LEGPL Nucleoside diphosphate kinase OS=Legionella pneumophila (strain
Lens) GN=ndk PE=3 SV=1
Length = 141
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 18 FHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLG 77
IV + T ++++Q E FY H+ + F+ LV MISGP I +L ENA+ K RE++G
Sbjct: 32 LDIVAAKMTQLSREQAESFYDIHRARPFFKDLVDFMISGPVMIQVLKGENAVAKNREIMG 91
Query: 78 PTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
T + + P +IR + S NA HGS+ L + E
Sbjct: 92 ATN---PKEAAPGTIRADFADSIDANAVHGSDSLENAARE 128
>sp|Q5ZV92|NDK_LEGPH Nucleoside diphosphate kinase OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=ndk PE=3 SV=2
Length = 141
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 18 FHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLG 77
IV + T ++++Q E FY H+ + F+ LV MISGP I +L ENA+ K RE++G
Sbjct: 32 LDIVAAKMTQLSREQAESFYDIHRARPFFKDLVDFMISGPVMIQVLKGENAVAKNREIMG 91
Query: 78 PTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
T + + P +IR + S NA HGS+ L + E
Sbjct: 92 ATN---PKEAAPGTIRADFADSIDANAVHGSDSLENAARE 128
>sp|Q8N427|TXND3_HUMAN Thioredoxin domain-containing protein 3 OS=Homo sapiens GN=NME8
PE=1 SV=2
Length = 588
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 5 HEKAIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILA 64
+ I ++ F + + +T +Q E Y + K FY L+ + GPS + IL
Sbjct: 465 QREQILKIVKEAGFDLTQVKKMFLTPEQIEKIYPKVTGKDFYKDLLEMLSVGPSMVMILT 524
Query: 65 RENAITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGS 108
+ NA+ +WR L+GPT A+ P SIR +GIS +N HG+
Sbjct: 525 KWNAVAEWRRLMGPTDPEEAKLLSPDSIRAQFGISKLKNIVHGA 568
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 5 HEKA--IQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINI 62
HE+ + +I F I+E +++++ + E++++ ++N+L+ M SGPS +
Sbjct: 328 HERKDDVLRIIKDEDFKILEQRQVVLSEKEAQALCKEYENEDYFNKLIENMTSGPSLALV 387
Query: 63 LARENAITKWRELLGPTKVYIARFSHPYSIRGMYGI-SDTRNAAHGSEWLRDYNHE 117
L R+N + W++LLGP V A P S+ + + S N +GS+ L E
Sbjct: 388 LLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQFAMDSLPVNQLYGSDSLETAERE 443
>sp|Q89MS3|NDK_BRAJA Nucleoside diphosphate kinase OS=Bradyrhizobium japonicum (strain
USDA 110) GN=ndk PE=3 SV=1
Length = 140
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 8 AIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAREN 67
A+ VI IV MTK+Q E FY+ HK + F+ LV M SGP + +L EN
Sbjct: 22 AVNAVIEKAGLRIVAQKRIRMTKEQAETFYAVHKARPFFGELVEFMTSGPVVVQVLEGEN 81
Query: 68 AITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
A+ K+R+ +G T A +IR +Y S N+AHGS+
Sbjct: 82 AVAKYRDAMGATDPSKA---AEGTIRKLYAKSIGENSAHGSD 120
>sp|Q86XW9|TXND6_HUMAN Thioredoxin domain-containing protein 6 OS=Homo sapiens GN=NME9
PE=1 SV=1
Length = 330
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 18 FHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAR----ENAITKWR 73
F I+ + MT+ + +FY + + +LV M SGPS + IL R E+ +T WR
Sbjct: 187 FEILTNEERTMTEAEVRLFYQHKAGEEAFEKLVHHMCSGPSHLLILTRTEGFEDVVTTWR 246
Query: 74 ELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
++GP +AR P S+R YG NA HGS D + E
Sbjct: 247 TVMGPRDPNVARREQPESLRAQYGTEMPFNAVHGSRDREDADRE 290
>sp|P43802|NDK_HAEIN Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ndk PE=3 SV=1
Length = 141
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 16 NQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWREL 75
N F I+ S +T++Q E FY+EH+ K F+ LV M+S P +++L +ENA+ +R L
Sbjct: 30 NGFKIIASKMVRLTREQAEGFYAEHQGKEFFVPLVEYMMSSPIVVSVLEKENAVKDYRTL 89
Query: 76 LGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
+G T A +IR + +S N+ HGS+ + N E
Sbjct: 90 IGTTNPETA---AEGTIRKDFALSQRENSVHGSDSIESANRE 128
>sp|C1DD40|NDK_LARHH Nucleoside diphosphate kinase OS=Laribacter hongkongensis (strain
HLHK9) GN=ndk PE=3 SV=1
Length = 141
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 15 SNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRE 74
SN IV + +++++ E FY+ HK++ F+N LV MISGP + +L ENA+ K RE
Sbjct: 29 SNGLKIVAAKMKHLSRREAEGFYAVHKERPFFNDLVEFMISGPVMVQVLEGENAVLKNRE 88
Query: 75 LLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRD 113
L+G T + + +IR + S NA HGS+ L +
Sbjct: 89 LMGATD---PKKADAGTIRADFAESIDANAVHGSDSLEN 124
>sp|A5IC43|NDK_LEGPC Nucleoside diphosphate kinase OS=Legionella pneumophila (strain
Corby) GN=ndk PE=3 SV=1
Length = 141
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 18 FHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLG 77
IV + T ++++Q E FY H+ + F+ LV MISGP I +L ENA+ K RE++G
Sbjct: 32 LDIVAAKMTQLSREQAENFYDIHRARPFFKDLVDFMISGPVMIQVLKGENAVAKNREIMG 91
Query: 78 PTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
T + + P +IR + S NA HGS+ L + E
Sbjct: 92 ATN---PKEAAPGTIRADFADSIDANAVHGSDSLENAARE 128
>sp|A8HS90|NDK_AZOC5 Nucleoside diphosphate kinase OS=Azorhizobium caulinodans (strain
ATCC 43989 / DSM 5975 / ORS 571) GN=ndk PE=3 SV=1
Length = 140
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 8 AIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAREN 67
AI VI IV MTK Q E FY+ H + F+N LV+ M SGP + +L E+
Sbjct: 22 AINAVIEKAGLRIVAQKRIQMTKAQAEAFYAVHSARPFFNDLVSFMTSGPVVVQVLEGED 81
Query: 68 AITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
A+ K+RE++G T A +IR ++ S N+AHGS+ + + E
Sbjct: 82 AVAKYREVMGATNPANA---AEGTIRKLFAESIEANSAHGSDSVENAGVE 128
>sp|Q7N710|NDK_PHOLL Nucleoside diphosphate kinase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=ndk PE=3 SV=1
Length = 141
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 15 SNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRE 74
S F I+ + +T++Q E FY+EHK + F++ LV M SGP + +L ENA+ + R+
Sbjct: 29 SAGFKIIAAKMLHLTREQAEGFYAEHKGRPFFDGLVEFMTSGPIVVQVLEGENAVQRHRD 88
Query: 75 LLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSEWLRDYNHE 117
L+G T A ++R Y S T NA HGS+ + N E
Sbjct: 89 LMGATNPDNALAG---TLRADYADSFTENAVHGSDAVESANRE 128
>sp|B8F3E4|NDK_HAEPS Nucleoside diphosphate kinase OS=Haemophilus parasuis serovar 5
(strain SH0165) GN=ndk PE=3 SV=1
Length = 138
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 28 MTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILARENAITKWRELLGPTKVYIARFS 87
+TK+QTE FY+EH+ K F++ LV MIS P + +L ENA+ +R L+G TK +
Sbjct: 41 LTKEQTEGFYAEHQGKDFFDPLVAFMISEPIVVAVLEGENAVENYRLLMGATKPEERKLG 100
Query: 88 HPYSIRGMYGISDTRNAAHGSE 109
+IR M+G+ NA HGS+
Sbjct: 101 ---TIRKMFGLGYRENAVHGSD 119
>sp|B4EZT7|NDK_PROMH Nucleoside diphosphate kinase OS=Proteus mirabilis (strain HI4320)
GN=ndk PE=3 SV=1
Length = 141
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 8 AIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAREN 67
AI N S F IV + +T++Q E FY EHK + F++ LV M SGP + +L EN
Sbjct: 22 AIYNRFESAGFSIVAAKMLHLTREQAEGFYEEHKGRPFFDGLVEFMTSGPIMVQVLEGEN 81
Query: 68 AITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
AI + R+L+G T A ++R Y S T NA HGS+
Sbjct: 82 AIQRHRDLMGATNPDNALAG---TLRADYADSFTENAVHGSD 120
>sp|B6EGY3|NDK_ALISL Nucleoside diphosphate kinase OS=Aliivibrio salmonicida (strain
LFI1238) GN=ndk PE=3 SV=1
Length = 144
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 8 AIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAREN 67
AI I +V + ++TK+Q + FY+EH+ K F++ LV M SGP + +L E+
Sbjct: 22 AIYRRIEKTGMQVVAAKMLSLTKEQAQGFYAEHEGKEFFDALVEYMTSGPVMVQVLEGES 81
Query: 68 AITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
IT++REL+G T A S+R Y IS N+ HGS+
Sbjct: 82 VITRYRELMGKTNPDEAACG---SLRSDYAISMRYNSVHGSD 120
>sp|B4RVH4|NDK_ALTMD Nucleoside diphosphate kinase OS=Alteromonas macleodii (strain DSM
17117 / Deep ecotype) GN=ndk PE=3 SV=2
Length = 143
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 8 AIQNVILSNQFHIVESLTTAMTKQQTEIFYSEHKDKFFYNRLVTQMISGPSEINILAREN 67
AI N S IV S M+K+Q E FY+EHK++ F+ LV M SGP + +L EN
Sbjct: 22 AIYNRFESAGLRIVASKMIHMSKEQAEGFYAEHKERPFFGALVDFMTSGPVMVQVLEGEN 81
Query: 68 AITKWRELLGPTKVYIARFSHPYSIRGMYGISDTRNAAHGSE 109
A+ RE++G T A ++R Y S NA HGS+
Sbjct: 82 AVLANREIMGATNPADAAAG---TLRSDYAASIDENAVHGSD 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,785,791
Number of Sequences: 539616
Number of extensions: 1570804
Number of successful extensions: 4437
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 3376
Number of HSP's gapped (non-prelim): 760
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)