BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8260
(427 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 232/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 52 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 111
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 112 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 171
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 172 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 215
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 216 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 314 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 350
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 232/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 52 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 111
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 112 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 171
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 172 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 215
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 216 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 314 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 350
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 45 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 104
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 105 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 164
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 165 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 208
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 209 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 307 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 344
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 39 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 98
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 99 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 158
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 159 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 202
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 203 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 240
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 241 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 300
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 301 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 338
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 47 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 107 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 166
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 167 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 210
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 211 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 309 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 346
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 42 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 101
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 102 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 161
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 162 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 205
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 206 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 304 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 341
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 45 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 104
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 105 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 164
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 165 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 208
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 209 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 307 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 344
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 232/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 51 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 110
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 111 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 170
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 171 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 214
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 215 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 253 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 312
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 313 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 349
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 42 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 101
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 102 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 161
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 162 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 205
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 206 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 304 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 341
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 232/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 63 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 122
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 123 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 182
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 183 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 226
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 227 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 265 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 324
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 325 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 361
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 42 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 101
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 102 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 161
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 162 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 205
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 206 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 304 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 341
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 46 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 105
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 106 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 165
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 166 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 209
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 210 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 308 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 345
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 383 bits (984), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 232/339 (68%), Gaps = 39/339 (11%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +
Sbjct: 39 CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
F +VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AV
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261
NEDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 159 NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT--------------- 203
Query: 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLG 320
+ I G E++ + TD I QL LI+ ++G
Sbjct: 204 ------VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 321 TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAE 380
TP AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 381 QALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
QALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 301 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 383 bits (984), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 232/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 59 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 118
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 119 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 178
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 179 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 222
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 223 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 261 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 320
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 321 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 357
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 383 bits (984), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 232/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 60 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 119
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 120 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 179
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 180 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 223
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 224 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 262 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 322 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 358
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 232/339 (68%), Gaps = 39/339 (11%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +
Sbjct: 35 CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
F +VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AV
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261
NEDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 155 NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT--------------- 199
Query: 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLG 320
+ I G E++ + TD I QL LI+ ++G
Sbjct: 200 ------VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 321 TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAE 380
TP AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA
Sbjct: 237 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 381 QALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
QALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 297 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 335
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 47 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 107 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 166
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T +EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 167 EDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 210
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 211 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 309 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 346
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 232/339 (68%), Gaps = 39/339 (11%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +
Sbjct: 36 CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 95
Query: 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
F +VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AV
Sbjct: 96 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261
NEDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 156 NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT--------------- 200
Query: 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLG 320
+ I G E++ + TD I QL LI+ ++G
Sbjct: 201 ------VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 321 TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAE 380
TP AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 381 QALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
QALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 298 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 336
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 46 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 105
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 106 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 165
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 166 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 209
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 210 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 308 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 345
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/337 (57%), Positives = 231/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
S+ D SG+K+A+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF T L +F
Sbjct: 69 SSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEF 128
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 129 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 188
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYN T
Sbjct: 189 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMT---------------- 232
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I+QL IM + GT
Sbjct: 233 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
PPA ++++ S AR YINSLP + K++F VF GANP A+ KRITA +
Sbjct: 271 PPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASE 330
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAHPY SQY DP+DEP S PYDQSFE L +++WK
Sbjct: 331 ALAHPYFSQYHDPDDEPESEPYDQSFESRQLEIEEWK 367
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 232/339 (68%), Gaps = 39/339 (11%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +
Sbjct: 36 CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 95
Query: 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
F +VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AV
Sbjct: 96 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261
NEDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 156 NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT--------------- 200
Query: 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLG 320
+ I G E++ + TD I QL LI+ ++G
Sbjct: 201 ------VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 321 TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAE 380
TP AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 381 QALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
QALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 298 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 336
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 232/339 (68%), Gaps = 39/339 (11%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +
Sbjct: 37 CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 96
Query: 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
F +VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AV
Sbjct: 97 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 156
Query: 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261
NEDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 157 NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT--------------- 201
Query: 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLG 320
+ I G E++ + TD I QL LI+ ++G
Sbjct: 202 ------VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVG 238
Query: 321 TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAE 380
TP AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA
Sbjct: 239 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 298
Query: 381 QALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
QALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 299 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 337
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/337 (57%), Positives = 232/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK+++PFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 52 AAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 111
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 112 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 171
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 172 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 215
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 216 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 314 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 350
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILD+GLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 232/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + P+DQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPFDQSFESRDLLIDEWKS 339
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 63 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 122
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 123 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 182
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EM GYVATRWYRAPEIMLNWMHYNQT
Sbjct: 183 EDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQT---------------- 226
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 227 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 265 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 324
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 325 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 362
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 50 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 109
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 110 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 169
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 170 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 213
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 214 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 251
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 252 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 311
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 312 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 349
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 231/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 60 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 119
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 120 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 179
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 180 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 223
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 224 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 262 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 322 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 358
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 231/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 59 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 118
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 119 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 178
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 179 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 222
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 223 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 261 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 320
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 321 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 357
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 46 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 105
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 106 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 165
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 166 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 209
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 210 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 248 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 308 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 345
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 231/339 (68%), Gaps = 39/339 (11%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +
Sbjct: 35 CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
F +VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AV
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261
NEDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 155 NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT--------------- 199
Query: 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLG 320
+ I G E++ + TD I QL LI+ ++G
Sbjct: 200 ------VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 321 TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAE 380
TP AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 381 QALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
QALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 297 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 335
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + P DQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPTDQSFESRDLLIDEWKS 339
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKIL FGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + P DQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPRDQSFESRDLLIDEWKS 339
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + P DQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPQDQSFESRDLLIDEWKS 339
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 230/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 47 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 107 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 166
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T +EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 167 EDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 210
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 211 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQS E DL +D+WK
Sbjct: 309 ALAHAYFAQYHDPDDEPVADPYDQSLESRDLLIDEWKS 346
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILD GLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/339 (57%), Positives = 231/339 (68%), Gaps = 39/339 (11%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +
Sbjct: 39 CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
F +VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AV
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261
NEDCELKILDFGLAR T++EMTG VATRWYRAPEIMLNWMHYNQT
Sbjct: 159 NEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQT--------------- 203
Query: 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLG 320
+ I G E++ + TD I QL LI+ ++G
Sbjct: 204 ------VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 321 TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAE 380
TP AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 381 QALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
QALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 301 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 380 bits (976), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILD GLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 380 bits (976), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILD GLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 380 bits (976), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 46 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 105
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 106 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 165
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
ED ELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 166 EDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 209
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 210 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 308 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 345
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 380 bits (975), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 42 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 101
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 102 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 161
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
ED ELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 162 EDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 205
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 206 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 304 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 341
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 380 bits (975), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 230/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 47 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 107 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 166
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T +EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 167 EDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 210
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 211 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQS E DL +D+WK
Sbjct: 309 ALAHAYFAQYHDPDDEPVADPYDQSSESRDLLIDEWKS 346
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
ED ELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 45 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 104
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 105 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 164
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
ED ELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 165 EDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 208
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 209 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 307 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 344
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 45 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 104
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 105 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 164
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
ED ELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 165 EDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 208
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 209 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 307 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 344
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/337 (57%), Positives = 231/337 (68%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 51 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 110
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 111 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 170
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
ED ELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 171 EDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 214
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 215 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 253 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 312
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 313 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 349
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/339 (57%), Positives = 230/339 (67%), Gaps = 39/339 (11%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +
Sbjct: 35 CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
F +VY+VTHLMGADLNNI++ KL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AV
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261
NEDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 155 NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT--------------- 199
Query: 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLG 320
+ I G E++ + TD I QL LI+ ++G
Sbjct: 200 ------VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 321 TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAE 380
TP AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 381 QALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
QALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 297 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 335
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 231/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EMTGYVATRWYRAPEIMLN MHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/338 (57%), Positives = 230/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EM G+VATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/338 (57%), Positives = 230/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EM G+VATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/339 (56%), Positives = 230/339 (67%), Gaps = 39/339 (11%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +
Sbjct: 35 CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
F +VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AV
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261
NEDCELKILDFGLAR T++EM G+VATRWYRAPEIMLNWMHYNQT
Sbjct: 155 NEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQT--------------- 199
Query: 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLG 320
+ I G E++ + TD I QL LI+ ++G
Sbjct: 200 ------VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 321 TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAE 380
TP AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 381 QALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
QALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 297 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 335
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/338 (57%), Positives = 230/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDF LAR T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKS 339
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/337 (57%), Positives = 229/337 (67%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G +VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 60 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 119
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI++ QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 120 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 179
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR T++EM G VATRWYRAPEIMLNWMHYNQT
Sbjct: 180 EDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQT---------------- 223
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 224 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 262 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAH Y +QY DP+DEP + PYDQSFE DL +D+WK
Sbjct: 322 ALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 358
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/338 (56%), Positives = 230/338 (68%), Gaps = 39/338 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A D+ +G++VA+KK++RPFQS +HAKRTYRELR+LKHM HENVIGLLDVF L +F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+VY+VTHLMGADLNNI+++QKL+DDHVQFL+YQILRGLKYIHSA IIHRDLKPSN+AVN
Sbjct: 100 NDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
ED ELKILDFGL R T++EMTGYVATRWYRAPEIMLNWMHYNQT
Sbjct: 160 EDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQT---------------- 203
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + TD I QL LI+ ++GT
Sbjct: 204 -----VDIWSVGCI-----------------MAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P AE + KISS+SAR YI SL + K +F VF GANP A+ KRITA Q
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKG 419
ALAH Y +QY DP+DEP + PYDQS E DL +D+WK
Sbjct: 302 ALAHAYFAQYHDPDDEPVADPYDQSLESRDLLIDEWKS 339
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/336 (55%), Positives = 225/336 (66%), Gaps = 37/336 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
SA D+ KVA+KK++RPFQS +HA+RTYRELR+LKH+ HENVIGLLDVF T + DF
Sbjct: 38 SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 97
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
VY+VT LMGADLNNI++ Q LSD+HVQFLVYQ+LRGLKYIHSAGIIHRDLKPSN+AVN
Sbjct: 98 SEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN 157
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCEL+ILDFGLAR + EMTGYVATRWYRAPEIMLNWMHYNQT D+ +
Sbjct: 158 EDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQT------VDIWSVGCIM 211
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTP 322
E + K L G + Y I QL IME++GTP
Sbjct: 212 AELLQGKALFPG---------SDY----------------------IDQLKRIMEVVGTP 240
Query: 323 PAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQA 382
E +AKISS+ AR YI SLP + +KD +F+GANP AI +R++A +A
Sbjct: 241 SPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEA 300
Query: 383 LAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
LAH Y SQY DP DEP + PYD+S E + +++WK
Sbjct: 301 LAHAYFSQYHDPEDEPEAEPYDESVEAKERTLEEWK 336
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 358 bits (920), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/336 (55%), Positives = 225/336 (66%), Gaps = 37/336 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
SA D+ KVA+KK++RPFQS +HA+RTYRELR+LKH+ HENVIGLLDVF T + DF
Sbjct: 46 SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 105
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
VY+VT LMGADLNNI+++Q LSD+HVQFLVYQ+LRGLKYIHSAGIIHRDLKPSN+AVN
Sbjct: 106 SEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN 165
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
ED EL+ILDFGLAR + EMTGYVATRWYRAPEIMLNWMHYNQT D+ +
Sbjct: 166 EDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQT------VDIWSVGCIM 219
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTP 322
E + K L G + Y I QL IME++GTP
Sbjct: 220 AELLQGKALFPG---------SDY----------------------IDQLKRIMEVVGTP 248
Query: 323 PAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQA 382
E +AKISS+ AR YI SLP + +KD +F+GANP AI +R++A +A
Sbjct: 249 SPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEA 308
Query: 383 LAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
LAH Y SQY DP DEP + PYD+S E + +++WK
Sbjct: 309 LAHAYFSQYHDPEDEPEAEPYDESVEAKERTLEEWK 344
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 358 bits (918), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 185/336 (55%), Positives = 224/336 (66%), Gaps = 37/336 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
SA D+ KVA+KK++RPFQS +HA+RTYRELR+LKH+ HENVIGLLDVF T + DF
Sbjct: 46 SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 105
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
VY+VT LMGADLNNI++ Q LSD+HVQFLVYQ+LRGLKYIHSAGIIHRDLKPSN+AVN
Sbjct: 106 SEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN 165
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
ED EL+ILDFGLAR + EMTGYVATRWYRAPEIMLNWMHYNQT D+ +
Sbjct: 166 EDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQT------VDIWSVGCIM 219
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTP 322
E + K L G + Y I QL IME++GTP
Sbjct: 220 AELLQGKALFPG---------SDY----------------------IDQLKRIMEVVGTP 248
Query: 323 PAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQA 382
E +AKISS+ AR YI SLP + +KD +F+GANP AI +R++A +A
Sbjct: 249 SPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEA 308
Query: 383 LAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
LAH Y SQY DP DEP + PYD+S E + +++WK
Sbjct: 309 LAHAYFSQYHDPEDEPEAEPYDESVEAKERTLEEWK 344
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 318 bits (816), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 206/337 (61%), Gaps = 39/337 (11%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
SA+D +G KVAIKK+ RPFQS + AKR YRELR+LKHM HENVIGLLDVF + L DF
Sbjct: 43 SAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+ Y+V MG DL +++ +KL +D +QFLVYQ+L+GL+YIH+AGIIHRDLKP N+AVN
Sbjct: 103 TDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN 162
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR ++EM G V TRWYRAPE++LNWM Y QT
Sbjct: 163 EDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQT---------------- 206
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + +D + QL IM++ GT
Sbjct: 207 -----VDIWSVGCI-----------------MAEMITGKTLFKGSDHLDQLKEIMKVTGT 244
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
PPAEF+ ++ SD A+ Y+ LP L KKDF + A+P A+ +R+TA +
Sbjct: 245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE 304
Query: 382 ALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWK 418
ALAHPY D DEP YD SF+D+D +D+WK
Sbjct: 305 ALAHPYFESLHDTEDEPQVQKYDDSFDDVDRTLDEWK 341
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 296 bits (759), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 203/338 (60%), Gaps = 41/338 (12%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
SA+D SG KVAIKK++RPFQS + AKR YREL +LKHM HENVIGLLDVF + L +F
Sbjct: 42 SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+ Y+V M DL I+ K S++ +Q+LVYQ+L+GLKYIHSAG++HRDLKP N+AVN
Sbjct: 102 YDFYLVMPFMQTDLQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 160
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR + EMTGYV TRWYRAPE++L+WMHYNQT
Sbjct: 161 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQT---------------- 204
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + D + QL I+++ G
Sbjct: 205 -----VDIWSVGCI-----------------MAEMLTGKTLFKGKDYLDQLTQILKVTGV 242
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P EF+ K++ +A+ YI SLP +KDF Q+F A+PQA KR+TA Q
Sbjct: 243 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ 302
Query: 382 ALAHPYLSQYSDPNDEPTS-PPYDQSFEDMDLPVDQWK 418
AL HP+ + DP +E + P+D S E L VD+WK
Sbjct: 303 ALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWK 340
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 203/338 (60%), Gaps = 41/338 (12%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
SA+D SG KVAIKK++RPFQS + AKR YREL +LKHM HENVIGLLDVF + L +F
Sbjct: 60 SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+ Y+V M DL I+ + S++ +Q+LVYQ+L+GLKYIHSAG++HRDLKP N+AVN
Sbjct: 120 YDFYLVMPFMQTDLQKIMGME-FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 178
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV 262
EDCELKILDFGLAR + EMTGYV TRWYRAPE++L+WMHYNQT
Sbjct: 179 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQT---------------- 222
Query: 263 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIMEMLGT 321
+ I G E++ + D + QL I+++ G
Sbjct: 223 -----VDIWSVGCI-----------------MAEMLTGKTLFKGKDYLDQLTQILKVTGV 260
Query: 322 PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQ 381
P EF+ K++ +A+ YI SLP +KDF Q+F A+PQA KR+TA Q
Sbjct: 261 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ 320
Query: 382 ALAHPYLSQYSDPNDEPTS-PPYDQSFEDMDLPVDQWK 418
AL HP+ + DP +E + P+D S E L VD+WK
Sbjct: 321 ALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWK 358
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 209/372 (56%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 90
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+VTHLMGADL +L+TQ LS+DH+ +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYF 149
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N +LKI DFGLAR + + +T YVA
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 210 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 238
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 239 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 292
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 293 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 352
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 353 MELDDLPKEKLK 364
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/348 (39%), Positives = 195/348 (56%), Gaps = 46/348 (13%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ SSA ++G +VAIKKI F +AKRT REL++LKH H+N+I + D+
Sbjct: 69 VVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY 128
Query: 140 ADFKNVYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSN 198
+FK+VY+V LM +DL+ I+ + Q L+ +HV++ +YQ+LRGLKY+HSA +IHRDLKPSN
Sbjct: 129 GEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSN 188
Query: 199 IAVNEDCELKILDFGLAR-----PTENE--MTGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
+ VNE+CELKI DFG+AR P E++ MT YVATRWYRAPE+ML+ Y Q
Sbjct: 189 LLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQA----- 243
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+ + G + G + R P + +HQ
Sbjct: 244 ----------------IDLWSVGC-------IFGEMLARRQLFP---------GKNYVHQ 271
Query: 312 LNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXX 371
L LIM +LGTP + + ++ R YI SLP + V+ GA+ QA+
Sbjct: 272 LQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF 331
Query: 372 XXXKRITAEQALAHPYLSQYSDPNDEP-TSPPYDQSFEDMDLPVDQWK 418
RI+A AL HP+L++Y DP+DEP +PP+D +F+ L ++ K
Sbjct: 332 EPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIK 379
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 191/338 (56%), Gaps = 46/338 (13%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ SSA ++G +VAIKKI F +AKRT REL++LKH H+N+I + D+
Sbjct: 70 VVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY 129
Query: 140 ADFKNVYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSN 198
+FK+VY+V LM +DL+ I+ + Q L+ +HV++ +YQ+LRGLKY+HSA +IHRDLKPSN
Sbjct: 130 GEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSN 189
Query: 199 IAVNEDCELKILDFGLAR-----PTENE--MTGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
+ VNE+CELKI DFG+AR P E++ MT YVATRWYRAPE+ML+ Y Q
Sbjct: 190 LLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQA----- 244
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+ + G + G + R P + +HQ
Sbjct: 245 ----------------IDLWSVGC-------IFGEMLARRQLFP---------GKNYVHQ 272
Query: 312 LNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXX 371
L LIM +LGTP + + ++ R YI SLP + V+ GA+ QA+
Sbjct: 273 LQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF 332
Query: 372 XXXKRITAEQALAHPYLSQYSDPNDEP-TSPPYDQSFE 408
RI+A AL HP+L++Y DP+DEP +PP+D +F+
Sbjct: 333 EPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFAFD 370
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 190 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 218
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 219 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 272
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 332
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 333 MELDDLPKEKLK 344
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 207/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 72
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 131
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 192 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 220
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 221 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 274
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL+QY DP+DEP + P+
Sbjct: 275 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAPFKFD 334
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 335 MELDDLPKEKLK 346
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 20 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 78
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 137
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 138 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 198 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 226
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 227 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 280
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 281 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 340
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 341 MELDDLPKEKLK 352
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 190 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 218
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 219 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 272
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 332
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 333 MELDDLPKEKLK 344
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 72
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 131
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 192 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 220
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 221 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 274
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 275 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 334
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 335 MELDDLPKEKLK 346
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 90
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 149
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 210 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 238
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 239 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 292
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 293 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 352
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 353 MELDDLPKEKLK 364
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 208/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRGV-IDIGPTLSK-----ESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ +G D+GP ++ E + SSA D V +VAIKKI+ PF+ + +RT R
Sbjct: 32 EMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLR 90
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HENVIG+ D+ ++T L ++VY+V LM DL +L++Q+LS+DH+ +
Sbjct: 91 EIQILLRFRHENVIGIRDILRAST-LEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYF 149
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT--ENEMTGY----VA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR E++ TG+ VA
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 210 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 238
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP TK
Sbjct: 239 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTK 292
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F ++ +A+ KRIT E+ALAHPYL QY DP DEP + P+ +
Sbjct: 293 VAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEPFTFA 352
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 353 MELDDLPKERLK 364
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 75
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 134
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 195 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 223
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 224 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 277
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 278 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 337
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 338 MELDDLPKEKLK 349
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 18 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 76
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 135
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 136 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 196 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 224
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 225 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 278
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 279 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 338
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 339 MELDDLPKEKLK 350
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 9 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 67
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 126
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 127 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 187 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 215
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 216 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 269
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 270 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 329
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 330 MELDDLPKEKLK 341
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 74
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 194 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 222
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 223 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 276
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 336
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 337 MELDDLPKEKLK 348
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 68
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 127
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 188 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 216
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 217 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 270
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 271 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 330
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 331 MELDDLPKEKLK 342
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 68
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 127
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 188 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 216
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 217 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNK 270
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 271 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 330
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 331 MELDDLPKEKLK 342
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 206/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAI+KI+ PF+ + +RT R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS-PFEHQTYCQRTLR 74
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 194 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 222
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 223 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 276
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 336
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 337 MELDDLPKEKLK 348
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 74
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+ Q LS+DH+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYF 133
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR + + +T YVA
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 194 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 222
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 223 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 276
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 336
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 337 MELDDLPKEKLK 348
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 207/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 74
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT--ENEMTGY----VA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR +++ TG+ VA
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 194 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 222
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 223 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 276
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 336
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 337 MELDDLPKEKLK 348
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 207/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 75
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 134
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT--ENEMTGY----VA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N C+LKI DFGLAR +++ TG+ VA
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 195 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 223
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 224 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 277
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 278 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 337
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 338 MELDDLPKEKLK 349
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N +LKI DFGLAR + + +T YVA
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 190 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 218
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 219 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNK 272
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 332
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 333 MELDDLPKEKLK 344
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N +LKI DFGLAR + + +T YVA
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 190 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 218
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 219 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNK 272
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 332
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 333 MELDDLPKEKLK 344
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N +LKI DFGLAR + + +T YVA
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 190 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 218
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 219 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 272
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 332
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 333 MELDDLPKEKLK 344
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLR 74
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N +LKI DFGLAR + + +T YVA
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 194 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 222
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 223 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 276
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 336
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 337 MELDDLPKEKLK 348
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+++ V+VAIKKI+ PF+ + +RT R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYXQRTLR 74
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N +LKI DFGLAR + + +T YVA
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 194 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 222
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + I + AR Y+ SLP K
Sbjct: 223 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 276
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL QY DP+DEP + P+
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 336
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 337 MELDDLPKEKLK 348
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 60 EICRG-VIDIGPTLSKESFDL-----IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
E+ RG V D+GP + S+ + SA D+V+ V+VAIKKI+ PF+ + +RT R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLR 72
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+++L HEN+IG+ D+ + T + K+VY+V LM DL +L+TQ LS+DH+ +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 131
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVA 227
+YQILRGLKYIHSA ++HRDLKPSN+ +N +LKI DFGLAR + + +T YVA
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
TRWYRAPEIMLN Y ++ + I G +
Sbjct: 192 TRWYRAPEIMLNSKGYTKS---------------------IDIWSVGCI----------L 220
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347
A P + HY + QLN I+ +LG+P E + + AR Y+ SLP K
Sbjct: 221 AEMLSNRP--IFPGKHY----LDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNK 274
Query: 348 KDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS 406
+ ++F A+ +A+ KRI EQALAHPYL+QY DP+DEP + P+
Sbjct: 275 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAPFKFD 334
Query: 407 FEDMDLPVDQWK 418
E DLP ++ K
Sbjct: 335 MELDDLPKEKLK 346
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 182/346 (52%), Gaps = 53/346 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ SA +G VAIKKI PF + A RT RE+++LKH HEN+I + ++ ++
Sbjct: 26 VVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDS-F 83
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F VY++ LM DL+ ++ TQ LSDDH+Q+ +YQ LR +K +H + +IHRDLKPSN+
Sbjct: 84 ENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNL 143
Query: 200 AVNEDCELKILDFGLAR-----------PT--ENEMTGYVATRWYRAPEIMLNWMHYNQT 246
+N +C+LK+ DFGLAR PT ++ MT YVATRWYRAPE+ML Y++
Sbjct: 144 LINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRA 203
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+ C + + L RP R YR
Sbjct: 204 MDVW--------------SCGCILAELFLRRPI-------FPGRDYR------------- 229
Query: 307 TDIHQLNLIMEMLGTPPAEF-MAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXX 365
HQL LI ++GTP ++ + I S AR+YI SLP+ ++F NP+ I
Sbjct: 230 ---HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL 286
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSFEDMD 411
KRITA++AL HPYL Y DPNDEP P SF + D
Sbjct: 287 QRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFD 332
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 189/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V G+ VA+KK++RPFQ+ HAKR YREL +LK +NH+N+I LL+VF L
Sbjct: 39 IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L ++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYLVMELMDANLCQVIHME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE+
Sbjct: 158 VVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV--------------------- 196
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
IL G A + G + E++ + + TD I Q N ++
Sbjct: 197 ------------ILGMGYAANVDIWSVGCIMG------ELVKGCVIFQGTDHIDQWNKVI 238
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP AEFMA + + R Y+ + P F ++F K QA
Sbjct: 239 EQLGTPSAEFMAALQP-TVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDL 297
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP + PP YD E+ + +++WK
Sbjct: 298 LSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWK 353
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 192/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V G+ VA+KK++RPFQ+ HAKR YREL +LK +NH+N+I LL+VF L
Sbjct: 37 IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL 96
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L ++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 97 EEFQDVYLVMELMDANLCQVIHME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 155
Query: 200 AVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y +
Sbjct: 156 VVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILG-MGYKEN----------- 203
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 204 ----------VDIWSVGC-------IMG----------ELVKGSVIFQGTDHIDQWNKVI 236
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP AEFMA + + R Y+ + P F ++F K QA
Sbjct: 237 EQLGTPSAEFMAALQP-TVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDL 295
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP + PP YD E+ + +++WK
Sbjct: 296 LSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWK 351
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 181/346 (52%), Gaps = 53/346 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ SA +G VAIKKI PF + A RT RE+++LKH HEN+I + ++ ++
Sbjct: 26 VVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDS-F 83
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F VY++ LM DL+ ++ TQ LSDDH+Q+ +YQ LR +K +H + +IHRDLKPSN+
Sbjct: 84 ENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNL 143
Query: 200 AVNEDCELKILDFGLAR-----------PT--ENEMTGYVATRWYRAPEIMLNWMHYNQT 246
+N +C+LK+ DFGLAR PT ++ MT VATRWYRAPE+ML Y++
Sbjct: 144 LINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRA 203
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+ C + + L RP R YR
Sbjct: 204 MDVW--------------SCGCILAELFLRRPI-------FPGRDYR------------- 229
Query: 307 TDIHQLNLIMEMLGTPPAEF-MAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXX 365
HQL LI ++GTP ++ + I S AR+YI SLP+ ++F NP+ I
Sbjct: 230 ---HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL 286
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSFEDMD 411
KRITA++AL HPYL Y DPNDEP P SF + D
Sbjct: 287 QRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFD 332
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 181/346 (52%), Gaps = 53/346 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ SA +G VAIKKI PF + A RT RE+++LKH HEN+I + ++ ++
Sbjct: 26 VVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDS-F 83
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F VY++ LM DL+ ++ TQ LSDDH+Q+ +YQ LR +K +H + +IHRDLKPSN+
Sbjct: 84 ENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNL 143
Query: 200 AVNEDCELKILDFGLAR-----------PT--ENEMTGYVATRWYRAPEIMLNWMHYNQT 246
+N +C+LK+ DFGLAR PT ++ M +VATRWYRAPE+ML Y++
Sbjct: 144 LINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRA 203
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+ C + + L RP R YR
Sbjct: 204 MDVW--------------SCGCILAELFLRRPI-------FPGRDYR------------- 229
Query: 307 TDIHQLNLIMEMLGTPPAEF-MAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXX 365
HQL LI ++GTP ++ + I S AR+YI SLP+ ++F NP+ I
Sbjct: 230 ---HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL 286
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSFEDMD 411
KRITA++AL HPYL Y DPNDEP P SF + D
Sbjct: 287 QRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFD 332
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 190/355 (53%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 44 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 103
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 104 EEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 162
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + DL
Sbjct: 163 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDLWS 215
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 216 VGCIMGEMVCHKILFPG---------------RDY----------------IDQWNKVIE 244
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 245 QLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 303
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 304 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 358
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 190/355 (53%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 33 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 92
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 93 EEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + DL
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDLWS 204
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 205 VGCIMGEMVCHKILFPG---------------RDY----------------IDQWNKVIE 233
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 234 QLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 292
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 293 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 347
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 193/356 (54%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L+ +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y +
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN----------- 205
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 206 ----------VDIWSVGC-------IMG----------EMIKGGVLFPGTDHIDQWNKVI 238
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 239 EQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 207 bits (527), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 192/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y +
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN----------- 205
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 206 ----------VDIWSVGC-------IMG----------EMIKGGVLFPGTDHIDQWNKVI 238
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 239 EQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 192/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y +
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN----------- 205
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 206 ----------VDIWSVGC-------IMG----------EMIKGGVLFPGTDHIDQWNKVI 238
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 239 EQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 192/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 40 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 99
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 100 EEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y +
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN----------- 206
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 207 ----------VDIWSVGC-------IMG----------EMIKGGVLFPGTDHIDQWNKVI 239
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 EQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 298
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 299 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 354
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 211 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 299 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 353
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 40 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 99
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 211
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 212 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 240
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 241 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 299
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 300 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 354
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 40 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 99
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 211
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 212 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 240
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 241 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 299
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 300 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 354
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 77 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 196 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 248
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 249 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 277
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 278 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 336
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 337 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 391
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 92 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 150
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 151 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 203
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 204 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 232
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 233 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 291
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 292 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 346
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 33 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 92
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 204
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 205 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 233
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 234 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 292
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 293 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 347
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 211 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 299 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 353
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 38 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 97
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 98 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 156
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 157 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 209
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 210 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 238
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 239 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 297
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 298 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 352
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 33 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 92
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 204
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 205 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 233
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 234 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 292
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 293 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 347
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 77 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 196 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 248
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 249 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 277
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 278 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 336
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 337 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 391
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 191/355 (53%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L+ +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ + E ++ G+ P + I Q N ++E
Sbjct: 211 VGVIMGE-----MIKGGVLFPGTDH--------------------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 191/355 (53%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L+ +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ + E ++ G+ P + I Q N ++E
Sbjct: 211 VGVIMGE-----MIKGGVLFPGTDH--------------------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 192/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L+ +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y +
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN----------- 205
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 206 ----------VDIWSVGC-------IMG----------EMIKGGVLFPGTDHIDQWNKVI 238
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 239 EQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 192/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L+ +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y +
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN----------- 205
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 206 ----------VDIWSVGC-------IMG----------EMIKGGVLFPGTDHIDQWNKVI 238
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 239 EQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 192/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L+ +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y +
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN----------- 205
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 206 ----------VDIWSVGC-------IMG----------EMIKGGVLFPGTDHIDQWNKVI 238
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 239 EQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 191/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 41 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 100
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 101 EEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 159
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T M +V TR+YRAPE++L M Y +
Sbjct: 160 VVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILG-MGYKEN----------- 207
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 208 ----------VDIWSVGC-------IMG----------EMIKGGVLFPGTDHIDQWNKVI 240
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXX 364
E LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 241 EQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 299
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 300 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 355
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 187/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQME-LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 211 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 299 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 353
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 188/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T M V TR+YRAPE++L M Y + DL
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG-MGYKEN------VDLWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 211 VGCIMGEMVCHKILFPG---------------RDY----------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 190/356 (53%), Gaps = 58/356 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T MT V TR+YRAPE++L M Y +
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILG-MGYKEN----------- 205
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD-IHQLNLIM 316
+ I G + G E++ + + TD I Q N ++
Sbjct: 206 ----------VDIWSVGC-------IMG----------EMIKGGVLFPGTDHIDQWNKVI 238
Query: 317 EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGA------------NPQAIXX 364
E LGTP EFM K+ + R Y+ + P F ++F QA
Sbjct: 239 EQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDL 297
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 298 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 187/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQME-LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 211 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 299 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 353
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 187/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 92 EEFQDVYLVMELMDANLXQVIQME-LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 150
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 151 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 203
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 204 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 232
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 233 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 291
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWK 418
KRI+ + AL HPY++ + DP + PP YD+ ++ + +++WK
Sbjct: 292 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 346
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 187/355 (52%), Gaps = 56/355 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D++ VAIKK++RPFQ+ HAKR YREL ++K +NH+N+IGLL+VF L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V DC LKILDFGLAR T M V TR+YRAPE++L M Y + D+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG-MGYKEN------VDIWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 211 VGCIMGEMVCHKILFPG---------------RDY----------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP FM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPCPAFMKKLQP-TVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY--DQSFEDMDLPVDQWK 418
KRI+ ++AL HPY++ + DP++ PP D+ ++ + +++WK
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 353
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 173/329 (52%), Gaps = 54/329 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 211 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSDP 394
KRI+ + AL HPY++ + DP
Sbjct: 299 SKMLVIDPAKRISVDDALQHPYINVWYDP 327
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 170/324 (52%), Gaps = 54/324 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I +A D+V VAIKK++RPFQ+ HAKR YREL ++K +NH+N+I LL+VF L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+F++VY+V LM A+L +++ + L + + +L+YQ+L G+K++HSAGIIHRDLKPSNI
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 200 AVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
V D LKILDFGLAR T MT YV TR+YRAPE++L M Y + D+
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN------VDIWS 210
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIME 317
+ E KIL G R Y I Q N ++E
Sbjct: 211 VGCIMGEMVRHKILFPG---------------RDY----------------IDQWNKVIE 239
Query: 318 MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF------------KGANPQAIXXX 365
LGTP EFM K+ + R Y+ + P F ++F K QA
Sbjct: 240 QLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 298
Query: 366 XXXXXXXXXKRITAEQALAHPYLS 389
KRI+ + AL HPY++
Sbjct: 299 SKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 174/374 (46%), Gaps = 58/374 (15%)
Query: 82 SSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141
A D + VAIKKI R F+ + KR RE+ +L +NH++V+ +LD+ +
Sbjct: 70 CEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD-VEK 128
Query: 142 FKNVYMVTHLMGADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIA 200
F +Y+V + +D + RT L++ H++ L+Y +L G+KY+HSAGI+HRDLKP+N
Sbjct: 129 FDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL 188
Query: 201 VNEDCELKILDFGLAR---------------PTENEM---------------TGYVATRW 230
VN+DC +K+ DFGLAR P E++M TG+V TRW
Sbjct: 189 VNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRW 248
Query: 231 YRAPEIMLNWMHYNQT------GVPFY-FQDLKPSNIAVNEDCELKILDFGLARPTENEM 283
YRAPE++L +Y + G F ++ N+A + D + ++
Sbjct: 249 YRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQK 308
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP 343
G ++ + + + QLN+I +LGTP E + + + A++YI P
Sbjct: 309 AGN-------------DFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFP 355
Query: 344 LLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPY 403
D + F ++ AI KRIT + LAHP+ + E +
Sbjct: 356 KREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNAT-- 413
Query: 404 DQSFEDMDLPVDQW 417
E + LP + W
Sbjct: 414 ----EKVRLPFNDW 423
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 171/368 (46%), Gaps = 55/368 (14%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143
A D + VAIKK+ R F+ + KR RE+ +L + + +I L D+ L F
Sbjct: 47 AYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLK-FD 105
Query: 144 NVYMVTHLMGADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+Y+V + +DL + +T L++ HV+ ++Y +L G K+IH +GIIHRDLKP+N +N
Sbjct: 106 ELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN 165
Query: 203 EDCELKILDFGLARPT----------------------------ENEMTGYVATRWYRAP 234
+DC +KI DFGLAR + ++T +V TRWYRAP
Sbjct: 166 QDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAP 225
Query: 235 EIMLNWMHYNQT----GVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR 290
E++L +Y + F +L L ++ + PT N + +
Sbjct: 226 ELILLQENYTNSIDIWSTGCIFAEL------------LNMMKSHINNPT-NRFPLFPGSS 272
Query: 291 WY-RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+ +P+ +H +++ QLN+I ++GTPP E + I+ KYI P D
Sbjct: 273 CFPLSPDHNSKKVH-EKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGID 331
Query: 350 FRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSFED 409
+ + + + I KRIT ++AL+HPYL N E + S E
Sbjct: 332 LSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLE------NFSTEK 385
Query: 410 MDLPVDQW 417
+ LP D W
Sbjct: 386 IILPFDDW 393
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 181/369 (49%), Gaps = 83/369 (22%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLL 130
L K ++ +++ S +D +G VA+KKI FQ++ A+RT+RE+ +L ++ HEN++ LL
Sbjct: 17 LGKGAYGIVWKS-IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGII 190
+V ++ + ++VY+V M DL+ ++R L H Q++VYQ+++ +KY+HS G++
Sbjct: 76 NVLRAD----NDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLL 131
Query: 191 HRDLKPSNIAVNEDCELKILDFGLARP------------------TEN------EMTGYV 226
HRD+KPSNI +N +C +K+ DFGL+R TEN +T YV
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 286
ATRWYRAPEI+L Y + G+ + + C L + G +P
Sbjct: 192 ATRWYRAPEILLGSTKYTK-GIDMW-----------SLGCILGEILCG--KP-------- 229
Query: 287 VATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP--- 343
+ + ++QL I+ ++ P E + I S A+ I SL
Sbjct: 230 ---------------IFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKV 274
Query: 344 LLTKKDFRQVF-------------KGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQ 390
+ + + R +F N +A+ KRI+A AL HP++S
Sbjct: 275 EIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI 334
Query: 391 YSDPNDEPT 399
+ +PN+EP
Sbjct: 335 FHNPNEEPN 343
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 156/328 (47%), Gaps = 53/328 (16%)
Query: 83 SALDSVSGVKVAIKKI---------ARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVF 133
+ +DS G+ VAIK++ + KR RE+R+L H +H N++GL D+F
Sbjct: 40 AGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF 98
Query: 134 HSNTCLADFKNVYMVTHLMGADLNNILRTQKL--SDDHVQFLVYQILRGLKYIHSAGIIH 191
A K +Y+VT LM DL ++ Q++ S H+Q+ +Y IL GL +H AG++H
Sbjct: 99 VHFEEPAMHK-LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVH 157
Query: 192 RDLKPSNIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVP 249
RDL P NI + ++ ++ I DF LAR + T YV RWYRAPE+++ + +
Sbjct: 158 RDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFT----- 212
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
K++D A G V + + YN
Sbjct: 213 -------------------KLVDMWSA--------GCVMAEMFNRKALFRGSTFYN---- 241
Query: 310 HQLNLIMEMLGTPPAEFMAKISSDSARKYI-NSLPLLTKKDFRQVFKGANPQAIXXXXXX 368
QLN I+E++GTP E + SS SAR Y+ NSL + + + V A+P A+
Sbjct: 242 -QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 369 XXXXXXKRITAEQALAHPYLSQYSDPND 396
+RI+ EQAL HPY DP D
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPLD 328
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 156/329 (47%), Gaps = 53/329 (16%)
Query: 82 SSALDSVSGVKVAIKKI---------ARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDV 132
+ +DS G+ VAIK++ + KR RE+R+L H +H N++GL D+
Sbjct: 39 CAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97
Query: 133 FHSNTCLADFKNVYMVTHLMGADLNNILRTQKL--SDDHVQFLVYQILRGLKYIHSAGII 190
F A K +Y+VT LM DL ++ Q++ S H+Q+ +Y IL GL +H AG++
Sbjct: 98 FVHFEEPAMHK-LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVV 156
Query: 191 HRDLKPSNIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
HRDL P NI + ++ ++ I DF LAR + T YV RWYRAPE+++ + +
Sbjct: 157 HRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFT---- 212
Query: 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD 308
K++D A G V + + YN
Sbjct: 213 --------------------KLVDMWSA--------GCVMAEMFNRKALFRGSTFYN--- 241
Query: 309 IHQLNLIMEMLGTPPAEFMAKISSDSARKYI-NSLPLLTKKDFRQVFKGANPQAIXXXXX 367
QLN I+E++GTP E + SS SAR Y+ NSL + + + V A+P A+
Sbjct: 242 --QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAK 299
Query: 368 XXXXXXXKRITAEQALAHPYLSQYSDPND 396
+RI+ EQAL HPY DP D
Sbjct: 300 MLEFNPQRRISTEQALRHPYFESLFDPLD 328
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 171/365 (46%), Gaps = 52/365 (14%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143
A D + VAIKK+ R F+ + KR RE+ +L + + +I L D+ + L F
Sbjct: 45 AYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK-FD 103
Query: 144 NVYMVTHLMGADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+Y+V + +DL + +T L+++H++ ++Y +L G +IH +GIIHRDLKP+N +N
Sbjct: 104 ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163
Query: 203 EDCELKILDFGLARPT-------------ENE------------MTGYVATRWYRAPEIM 237
+DC +K+ DFGLAR ENE +T +V TRWYRAPE++
Sbjct: 164 QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI 223
Query: 238 LNWMHYNQT----GVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY- 292
L +Y ++ F +L L +L + PT N + + +
Sbjct: 224 LLQENYTKSIDIWSTGCIFAEL------------LNMLQSHINDPT-NRFPLFPGSSCFP 270
Query: 293 RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQ 352
+P+ +H +++ QLN+I ++GTP + + I+ KYI P + +Q
Sbjct: 271 LSPDRNSKKVH-EKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQ 329
Query: 353 VFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSFEDMDL 412
+ + I KRIT +QAL HPYL E + S + + L
Sbjct: 330 KYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE------NFSTKKIIL 383
Query: 413 PVDQW 417
P D W
Sbjct: 384 PFDDW 388
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 167/343 (48%), Gaps = 72/343 (20%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+FS A+D+ +VAIKKI +V K RE+++++ ++H+N++ + ++ +
Sbjct: 26 LVFS-AVDNDCDKRVAIKKIVLTDPQSV--KHALREIKIIRRLDHDNIVKVFEILGPSGS 82
Query: 139 --------LADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGII 190
L + +VY+V M DL N+L L ++H + +YQ+LRGLKYIHSA ++
Sbjct: 83 QLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVL 142
Query: 191 HRDLKPSNIAVN-EDCELKILDFGLARPTE------NEMTGYVATRWYRAPEIMLNWMHY 243
HRDLKP+N+ +N ED LKI DFGLAR + ++ + T+WYR+P ++L+ +Y
Sbjct: 143 HRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNY 202
Query: 244 NQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEM-TGYVATRWYRAPEIMLNWM 302
K +D A EM TG T + A E
Sbjct: 203 T------------------------KAIDMWAAGCIFAEMLTG--KTLFAGAHE------ 230
Query: 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD-------FRQVFK 355
+ Q+ LI+E + + + ++ ++ +P+ + D Q+
Sbjct: 231 ------LEQMQLILESIPV--------VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLP 276
Query: 356 GANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEP 398
G + +A+ R+TAE+AL+HPY+S YS P DEP
Sbjct: 277 GISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEP 319
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 139/321 (43%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 20 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 79
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 80 ------YLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 186
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 187 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 216
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 217 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 274
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 275 NKRISAKAALAHPFFQDVTKP 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 139/321 (43%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 21 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 80
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 81 ------YLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 187
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 188 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 217
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 218 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 275
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 276 NKRISAKAALAHPFFQDVTKP 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 21 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 80
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 81 ------YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 135 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 187
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 188 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 217
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 218 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 275
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 276 NKRISAKAALAHPFFQDVTKP 296
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 19 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 78
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 79 ------YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 133 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 185
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 186 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 215
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 216 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 273
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 274 NKRISAKAALAHPFFQDVTKP 294
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 139/321 (43%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 273 NKRISAKAALAHPFFQDVTKP 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 20 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 79
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 80 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 134 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 186
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 187 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 216
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 217 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 274
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 275 NKRISAKAALAHPFFQDVTKP 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 20 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 79
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 80 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 186
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 187 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 216
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 217 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 274
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 275 NKRISAKAALAHPFFQDVTKP 295
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 22 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 81
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 82 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 135
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 136 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 188
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 189 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 218
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 219 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 276
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 277 NKRISAKAALAHPFFQDVTKP 297
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 21 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 80
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 81 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 187
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 188 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 217
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 218 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 275
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 276 NKRISAKAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 20 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 79
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 80 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 186
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 187 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 216
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 217 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 274
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 275 NKRISAKAALAHPFFQDVTKP 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 25 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 84
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 85 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 191
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 192 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 221
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 222 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 279
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 280 NKRISAKAALAHPFFQDVTKP 300
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 19 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 78
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 79 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 133 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 185
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 186 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 215
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 216 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 273
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 274 NKRISAKAALAHPFFQDVTKP 294
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 273 NKRISAKAALAHPFFQDVTKP 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 22 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 81
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 82 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 135
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 136 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 188
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 189 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 218
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 219 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 276
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 277 NKRISAKAALAHPFFQDVTKP 297
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 21 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 80
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 81 ------YLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 187
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 188 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 217
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 218 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 275
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 276 NKRISAKAALAHPFFQDVTKP 296
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 273 NKRISAKAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 77 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 183
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 184 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 213
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 214 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 271
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 272 NKRISAKAALAHPFFQDVTKP 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 21 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 80
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 81 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 187
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 188 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 217
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 218 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 275
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 276 NKRISAKAALAHPFFQDVTKP 296
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 25 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 84
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 85 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA------- 191
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 192 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 221
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 222 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 279
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 280 NKRISAKAALAHPFFQDVTKP 300
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 273 NKRISAKAALAHPFFQDVTKP 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 77 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 183
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 184 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 213
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 214 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 271
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 272 NKRISAKAALAHPFFQDVTKP 292
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 19 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 78
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 79 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 185
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 186 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 215
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 216 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 273
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 274 NKRISAKAALAHPFFQDVTKP 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 273 NKRISAKAALAHPFFQDVTKP 293
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 273 NKRISAKAALAHPFFQDVTKP 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 77 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 183
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 184 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 213
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 214 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 271
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 272 NKRISAKAALAHPFFQDVTKP 292
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 273 NKRISAKAALAHPFFQDVTKP 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 77 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 183
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 184 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 213
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 214 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 271
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 272 NKRISAKAALAHPFFQDVTKP 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 19 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 78
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 79 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 185
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 186 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 215
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 216 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 273
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 274 NKRISAKAALAHPFFQDVTKP 294
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 19 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 78
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 79 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 185
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 186 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 215
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 216 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 273
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 274 NKRISAKAALAHPFFQDVTKP 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 273 NKRISAKAALAHPFFQDVTKP 293
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 21 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 80
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 81 ------YLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 187
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 188 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 217
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 218 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 275
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 276 NKRISAKAALAHPFFQDVTKP 296
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 77 ------YLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 183
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 184 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 213
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 214 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 271
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 272 NKRISAKAALAHPFFQDVTKP 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 137/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+ KI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 273 NKRISAKAALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 137/321 (42%), Gaps = 51/321 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+ KI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 17 VVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 77 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA------- 183
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 184 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 213
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 214 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 271
Query: 374 XKRITAEQALAHPYLSQYSDP 394
KRI+A+ ALAHP+ + P
Sbjct: 272 NKRISAKAALAHPFFQDVTKP 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 136/315 (43%), Gaps = 51/315 (16%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A + ++G VA+KKI ++ RE+ +LK +NH N++ LLDV H+ L
Sbjct: 18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 77
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL---VYQILRGLKYIHSAGIIHRDLKP 196
Y+V + DL + L+ + + ++Q+L+GL + HS ++HRDLKP
Sbjct: 78 ------YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 197 SNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N + +K+ DFGLAR + Y V T WYRAPEI+L +Y+
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA------- 184
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
+ I G + + TR P ++I QL
Sbjct: 185 --------------VDIWSLGC-------IFAEMVTRRALFP---------GDSEIDQLF 214
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
I LGTP ++ S Y S P ++DF +V +
Sbjct: 215 RIFRTLGTPDEVVWPGVT--SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272
Query: 374 XKRITAEQALAHPYL 388
KRI+A+ ALAHP+
Sbjct: 273 NKRISAKAALAHPFF 287
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 131/314 (41%), Gaps = 50/314 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A DS G VA+K+I + RE+ +LK ++H N++ L+DV HS CL
Sbjct: 36 VVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 140 ADFKNVYMVTHLMGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
+V M DL +L K L D ++ +YQ+LRG+ + H I+HRDLKP
Sbjct: 95 T------LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQ 148
Query: 198 NIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQD 254
N+ +N D LK+ DFGLAR + Y V T WYRAP++++ Y+ + D
Sbjct: 149 NLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS------VD 202
Query: 255 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNL 314
+ E K L G+ TD QL
Sbjct: 203 IWSIGCIFAEMITGKPLFPGV-------------------------------TDDDQLPK 231
Query: 315 IMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXX 374
I +LGTP ++ K + + KK + + G + I
Sbjct: 232 IFSILGTPNPREWPQVQELPLWKQ-RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPN 290
Query: 375 KRITAEQALAHPYL 388
KRI+A A+ HPY
Sbjct: 291 KRISARDAMNHPYF 304
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 131/314 (41%), Gaps = 50/314 (15%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
+ A DS G VA+K+I + RE+ +LK ++H N++ L+DV HS CL
Sbjct: 36 VVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 140 ADFKNVYMVTHLMGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
+V M DL +L K L D ++ +YQ+LRG+ + H I+HRDLKP
Sbjct: 95 T------LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQ 148
Query: 198 NIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQD 254
N+ +N D LK+ DFGLAR + Y V T WYRAP++++ Y+ + D
Sbjct: 149 NLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS------VD 202
Query: 255 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNL 314
+ E K L G+ TD QL
Sbjct: 203 IWSIGCIFAEMITGKPLFPGV-------------------------------TDDDQLPK 231
Query: 315 IMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXX 374
I +LGTP ++ K + + KK + + G + I
Sbjct: 232 IFSILGTPNPREWPQVQELPLWKQ-RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPN 290
Query: 375 KRITAEQALAHPYL 388
KRI+A A+ HPY
Sbjct: 291 KRISARDAMNHPYF 304
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 140/332 (42%), Gaps = 55/332 (16%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVH---AKRTYRELRMLKHMNHENVIG 128
L + F ++ A D + VAIKKI +S + RE+++L+ ++H N+IG
Sbjct: 18 LGEGQFATVYK-ARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKL--SDDHVQFLVYQILRGLKYIHS 186
LLD F + N+ +V M DL I++ L + H++ + L+GL+Y+H
Sbjct: 77 LLDAFGHKS------NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 187 AGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHY 243
I+HRDLKP+N+ ++E+ LK+ DFGLA+ + Y V TRWYRAPE++ Y
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 244 NQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
GV + AV C L A R P +
Sbjct: 191 G-VGVDMW---------AVG--CIL-------------------AELLLRVPFLP----- 214
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIX 363
+D+ QL I E LGTP E + S S P + +F A +
Sbjct: 215 -GDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIP---LHHIFSAAGDDLLD 270
Query: 364 XXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
RITA QAL Y S P
Sbjct: 271 LIQGLFLFNPCARITATQALKMKYFSNRPGPT 302
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 61/323 (18%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143
L+ +GV VA+K++ + + RE+ ++K + HEN++ L DV H+ L
Sbjct: 24 GLNKTTGVYVALKEVKLDSEEGTPST-AIREISLMKELKHENIVRLYDVIHTENKLT--- 79
Query: 144 NVYMVTHLMGADLNNILRTQKLSD-------DHVQFLVYQILRGLKYIHSAGIIHRDLKP 196
+V M DL + ++ + + + V++ +Q+L+GL + H I+HRDLKP
Sbjct: 80 ---LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKP 136
Query: 197 SNIAVNEDCELKILDFGLARPTE---NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQ 253
N+ +N+ +LK+ DFGLAR N + V T WYRAP++++ Y+ T + +
Sbjct: 137 QNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYS-TSIDIW-- 193
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
C + + +P + D QL
Sbjct: 194 -----------SCGCILAEMITGKP-----------------------LFPGTNDEEQLK 219
Query: 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX 373
LI +++GTP ++ KY ++ +D RQV + + +
Sbjct: 220 LIFDIMGTPNESLWPSVT--KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGL 277
Query: 374 XK-----RITAEQALAHPYLSQY 391
+ R++A+QAL HP+ ++Y
Sbjct: 278 LQLNPDMRLSAKQALHHPWFAEY 300
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 132/319 (41%), Gaps = 73/319 (22%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K++ RE+ +LK + H+N++ L DV HS+ K + +V
Sbjct: 30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------KKLTLVFEFC 83
Query: 153 GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKIL 210
DL + L + V+ ++Q+L+GL + HS ++HRDLKP N+ +N + ELK+
Sbjct: 84 DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLA 143
Query: 211 DFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCE 267
DFGLAR + Y V T WYR P+++ Y+ T + + + +A
Sbjct: 144 DFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS-TSIDMWSAGCIFAELA------ 196
Query: 268 LKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAE-- 325
ARP N D QL I +LGTP E
Sbjct: 197 ------NAARPL----------------------FPGNDVD-DQLKRIFRLLGTPTEEQW 227
Query: 326 -FMAKISS-------DSARKYINSLPLL--TKKDFRQVFKGANPQAIXXXXXXXXXXXXK 375
M K+ + +N +P L T +D Q NP +
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP--------------VQ 273
Query: 376 RITAEQALAHPYLSQYSDP 394
RI+AE+AL HPY S + P
Sbjct: 274 RISAEEALQHPYFSDFCPP 292
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 131/319 (41%), Gaps = 73/319 (22%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K++ RE+ +LK + H+N++ L DV HS+ K + +V
Sbjct: 30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------KKLTLVFEFC 83
Query: 153 GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKIL 210
DL + L + V+ ++Q+L+GL + HS ++HRDLKP N+ +N + ELK+
Sbjct: 84 DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLA 143
Query: 211 DFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCE 267
+FGLAR + Y V T WYR P+++ Y+ + D+ + E
Sbjct: 144 NFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS------IDMWSAGCIFAE--- 194
Query: 268 LKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAE-- 325
LA G N D QL I +LGTP E
Sbjct: 195 -------LANAGRPLFPG-------------------NDVD-DQLKRIFRLLGTPTEEQW 227
Query: 326 -FMAKISS-------DSARKYINSLPLL--TKKDFRQVFKGANPQAIXXXXXXXXXXXXK 375
M K+ + +N +P L T +D Q NP +
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP--------------VQ 273
Query: 376 RITAEQALAHPYLSQYSDP 394
RI+AE+AL HPY S + P
Sbjct: 274 RISAEEALQHPYFSDFCPP 292
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 66/334 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKI--ARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVF 133
SF +++ + L SG VAIKK+ + F++ REL++++ ++H N++ L F
Sbjct: 32 SFGVVYQAKLCD-SGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLRYFF 82
Query: 134 HSNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAG 188
+S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS G
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 189 IIHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHY 243
I HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++ Y
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGATDY 200
Query: 244 NQTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302
S+I V + C L L G +
Sbjct: 201 T-------------SSIDVWSAGCVLAELLLG-------------------------QPI 222
Query: 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQA 361
+ + QL I+++LGTP E + +++ + + P + + +VF+ P+A
Sbjct: 223 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FAFPQIKAHPWTKVFRPRTPPEA 279
Query: 362 IXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
I R+T +A AH + + DPN
Sbjct: 280 IALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 125/306 (40%), Gaps = 50/306 (16%)
Query: 90 GVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149
G A+KKI + T RE+ +LK + H N++ L DV H+ K + +V
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK------KRLVLVF 79
Query: 150 HLMGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
+ DL +L + L + + Q+L G+ Y H ++HRDLKP N+ +N + EL
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 208 KILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNE 264
KI DFGLAR + Y V T WYRAP++++ Y+ T
Sbjct: 140 KIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT------------------ 181
Query: 265 DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPA 324
+D EM AP + ++ QL I +LGTP +
Sbjct: 182 ------IDIWSVGCIFAEMVN-------GAP------LFPGVSEADQLMRIFRILGTPNS 222
Query: 325 EFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALA 384
+ ++ KY + + + KG + I +RITA+QAL
Sbjct: 223 KNWPNVT--ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
Query: 385 HPYLSQ 390
H Y +
Sbjct: 281 HAYFKE 286
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 146/334 (43%), Gaps = 66/334 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKI--ARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVF 133
SF +++ + L SG VAIKK+ + F++ REL++++ ++H N++ L F
Sbjct: 32 SFGVVYQAKLCD-SGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLRYFF 82
Query: 134 HSNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAG 188
+S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS G
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 189 IIHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHY 243
I HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++ Y
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGATDY 200
Query: 244 NQTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302
S+I V + C L L G +
Sbjct: 201 T-------------SSIDVWSAGCVLAELLLG-------------------------QPI 222
Query: 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQA 361
+ + QL I+++LGTP E + +++ + P + + +VF+ P+A
Sbjct: 223 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEA 279
Query: 362 IXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
I R+T +A AH + + DPN
Sbjct: 280 IALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 86/165 (52%), Gaps = 15/165 (9%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
+G VAIKK + K RE+++LK + HEN++ LL+V K Y+V
Sbjct: 49 TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK------KRWYLV 102
Query: 149 ----THLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
H + DL L L VQ ++QI+ G+ + HS IIHRD+KP NI V++
Sbjct: 103 FEFVDHTILDDLE--LFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQS 160
Query: 205 CELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQT 246
+K+ DFG AR Y VATRWYRAPE+++ + Y +
Sbjct: 161 GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQ-TD 308
+D+KP NI V++ +K+ DFG AR Y VATRWYRAPE+++ + Y + D
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVD 207
Query: 309 IHQLN-LIMEMLGTPP 323
+ + L+ EM P
Sbjct: 208 VWAIGCLVTEMFMGEP 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 145/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 32 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++ Y
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGATDYT 201
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 202 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 223
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 281 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K+I + RE+ +LK + H N++ L D+ H+ K++ +V +
Sbjct: 30 VALKEIRLEHEEGAPCT-AIREVSLLKDLKHANIVTLHDIIHTE------KSLTLVFEYL 82
Query: 153 GADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKIL 210
DL L ++ +V+ ++Q+LRGL Y H ++HRDLKP N+ +NE ELK+
Sbjct: 83 DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLA 142
Query: 211 DFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQT----GVPFYFQDL---KPSNI 260
DFGLAR Y V T WYR P+I+L Y+ GV F ++ +P
Sbjct: 143 DFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP 202
Query: 261 AVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294
+ +L + L PTE G ++ ++
Sbjct: 203 GSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 64/163 (39%), Gaps = 28/163 (17%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYN-QTD 308
+DLKP N+ +NE ELK+ DFGLAR Y V T WYR P+I+L Y+ Q D
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQID 183
Query: 309 I-----------------------HQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLL 345
+ QL+ I +LGTP E I S+ K N P
Sbjct: 184 MWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN-YPKY 242
Query: 346 TKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
+ + RI+AE A+ HP+
Sbjct: 243 RAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 90 GVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149
G A+KKI + T RE+ +LK + H N++ L DV H+ K + +V
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK------KRLVLVF 79
Query: 150 HLMGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
+ DL +L + L + + Q+L G+ Y H ++HRDLKP N+ +N + EL
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 208 KILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQT 246
KI DFGLAR + Y V T WYRAP++++ Y+ T
Sbjct: 140 KIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 29/165 (17%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQT-- 307
+DLKP N+ +N + ELKI DFGLAR + Y V T WYRAP++++ Y+ T
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 308 ----------------------DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLL 345
+ QL I +LGTP ++ ++ KY + +
Sbjct: 184 IWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT--ELPKYDPNFTVY 241
Query: 346 TKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQ 390
+ KG + I +RITA+QAL H Y +
Sbjct: 242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 66/338 (19%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKI--ARPFQSAVHAKRTYRELRMLKHMNHENVIGL 129
+ SF +++ + L SG VAIKK+ + F++ REL++++ ++H N++ L
Sbjct: 28 IGNGSFGVVYQAKLCD-SGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRL 78
Query: 130 LDVFHSNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYI 184
F+S+ D + +V + A + + R Q L +V+ +YQ+ R L YI
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 185 HSAGIIHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLN 239
HS GI HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFG 196
Query: 240 WMHYNQTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298
Y S+I V + C L L G
Sbjct: 197 ATDYT-------------SSIDVWSAGCVLAELLLG------------------------ 219
Query: 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN 358
+ + + QL I+++LGTP E + +++ + + P + + +VF+
Sbjct: 220 -QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FAFPQIKAHPWTKVFRPRT 275
Query: 359 -PQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
P+AI R+T +A AH + + DPN
Sbjct: 276 PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 150/363 (41%), Gaps = 90/363 (24%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVI 127
+G TL SF ++ D SG + A+KK+ + + REL ++K ++H N+I
Sbjct: 11 LGKTLGTGSFGIV-CEVFDIESGKRFALKKVLQ------DPRYKNRELDIMKVLDHVNII 63
Query: 128 GLLDVF------------------------------HSNTCLADFKNVYM--VTHLMGAD 155
L+D F H + + +N Y+ + +
Sbjct: 64 KLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDT 123
Query: 156 LNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELKI 209
L+ +L++ + + + + +YQ+ R + +IHS GI HRD+KP N+ VN +D LK+
Sbjct: 124 LHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKL 183
Query: 210 LDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDC 266
DFG A+ P+E + + +R+YRAPE+ML Y PS + C
Sbjct: 184 CDFGSAKKLIPSEPSV-AXICSRFYRAPELMLGATEYT------------PSIDLWSIGC 230
Query: 267 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEF 326
L G +P + +T I QL I++++GTP E
Sbjct: 231 VFGELILG--KP-----------------------LFSGETSIDQLVRIIQIMGTPTKEQ 265
Query: 327 MAKISSDSARKYINSLPLLTKKDFRQVFKGANPQ-AIXXXXXXXXXXXXKRITAEQALAH 385
M +++ P L KD+R++ P AI RI +A+AH
Sbjct: 266 MIRMNPHYTEV---RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH 322
Query: 386 PYL 388
P+
Sbjct: 323 PFF 325
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 145/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 45 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 156
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++ Y
Sbjct: 157 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGATDYT 214
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 215 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 236
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 237 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 293
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 294 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 326
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 64/337 (18%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLL 130
+ SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L
Sbjct: 64 IGNGSFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLR 115
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIH 185
F+S+ D + +V + + + R Q L +V+ +YQ+ R L YIH
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 186 SAGIIHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNW 240
S GI HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++
Sbjct: 176 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGA 233
Query: 241 MHYNQTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299
Y S+I V + C L L G
Sbjct: 234 TDYT-------------SSIDVWSAGCVLAELLLG------------------------- 255
Query: 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN- 358
+ + + QL I+++LGTP E + +++ + P + + +VF+
Sbjct: 256 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTP 312
Query: 359 PQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
P+AI R+T +A AH + + DPN
Sbjct: 313 PEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 349
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 64/337 (18%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLL 130
+ SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L
Sbjct: 107 IGNGSFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLR 158
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIH 185
F+S+ D + +V + + + R Q L +V+ +YQ+ R L YIH
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 186 SAGIIHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNW 240
S GI HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++
Sbjct: 219 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGA 276
Query: 241 MHYNQTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299
Y S+I V + C L L G
Sbjct: 277 TDYT-------------SSIDVWSAGCVLAELLLG------------------------- 298
Query: 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN- 358
+ + + QL I+++LGTP E + +++ + P + + +VF+
Sbjct: 299 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTP 355
Query: 359 PQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
P+AI R+T +A AH + + DPN
Sbjct: 356 PEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 392
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 90 GVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149
G A+KKI + T RE+ +LK + H N++ L DV H+ K + +V
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK------KRLVLVF 79
Query: 150 HLMGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
+ DL +L + L + + Q+L G+ Y H ++HRDLKP N+ +N + EL
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 208 KILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQT 246
KI DFGLAR + Y + T WYRAP++++ Y+ T
Sbjct: 140 KIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTT 181
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 29/165 (17%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQT-- 307
+DLKP N+ +N + ELKI DFGLAR + Y + T WYRAP++++ Y+ T
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 308 ----------------------DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLL 345
+ QL I +LGTP ++ ++ KY + +
Sbjct: 184 IWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT--ELPKYDPNFTVY 241
Query: 346 TKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQ 390
+ KG + I +RITA+QAL H Y +
Sbjct: 242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 64/337 (18%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLL 130
+ SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L
Sbjct: 66 IGNGSFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLR 117
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIH 185
F+S+ D + +V + + + R Q L +V+ +YQ+ R L YIH
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 186 SAGIIHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNW 240
S GI HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++
Sbjct: 178 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGA 235
Query: 241 MHYNQTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299
Y S+I V + C L L G
Sbjct: 236 TDYT-------------SSIDVWSAGCVLAELLLG------------------------- 257
Query: 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN- 358
+ + + QL I+++LGTP E + +++ + P + + +VF+
Sbjct: 258 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTP 314
Query: 359 PQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
P+AI R+T +A AH + + DPN
Sbjct: 315 PEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 351
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 145/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 66 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 177
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++ Y
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGATDYT 235
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 236 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 257
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 258 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 314
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 315 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 347
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 145/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 60 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 171
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++ Y
Sbjct: 172 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGATDYT 229
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 230 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 251
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 252 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 308
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 309 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 341
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 64/337 (18%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLL 130
+ SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L
Sbjct: 33 IGNGSFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLR 84
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIH 185
F+S+ D + +V + + + R Q L +V+ +YQ+ R L YIH
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 186 SAGIIHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNW 240
S GI HRD+KP N+ ++ D LK+ DFG L R N Y+ +R+YRAPE++
Sbjct: 145 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGA 202
Query: 241 MHYNQTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299
Y S+I V + C L L G
Sbjct: 203 TDYT-------------SSIDVWSAGCVLAELLLG------------------------- 224
Query: 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN- 358
+ + + QL I+++LGTP E + +++ + P + + +VF+
Sbjct: 225 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTP 281
Query: 359 PQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
P+AI R+T +A AH + + DPN
Sbjct: 282 PEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 318
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 147/340 (43%), Gaps = 62/340 (18%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
+ + +F +F A +G KVA+KK+ + RE+++L+ + HENV+ L++
Sbjct: 26 IGQGTFGEVFK-ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 132 VFHS-----NTCLADFKNVY-MVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
+ + N C A V+ H + L+N+L LS+ ++ ++ +L GL YIH
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIH 142
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLARP-------TENEMTGYVATRWYRAPEIML 238
I+HRD+K +N+ + D LK+ DFGLAR N V T WYR PE++L
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 202
Query: 239 NWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298
Y G P +D A EM W R+P +
Sbjct: 203 GERDY---GPP---------------------IDLWGAGCIMAEM-------WTRSPIMQ 231
Query: 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLT--KKDFRQVFKG 356
N T+ HQL LI ++ G+ E + D+ Y L L+ K+ + K
Sbjct: 232 GN------TEQHQLALISQLCGSITPEVWPNV--DNYELY-EKLELVKGQKRKVKDRLKA 282
Query: 357 --ANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+P A+ +RI ++ AL H + +SDP
Sbjct: 283 YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF--WSDP 320
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 32 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 201
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 202 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 223
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 281 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 146/340 (42%), Gaps = 62/340 (18%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
+ + +F +F A +G KVA+KK+ + RE+++L+ + HENV+ L++
Sbjct: 26 IGQGTFGEVFK-ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 132 VFHS-----NTCLADFKNVY-MVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
+ + N C V+ H + L+N+L LS+ ++ ++ +L GL YIH
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIH 142
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLARP-------TENEMTGYVATRWYRAPEIML 238
I+HRD+K +N+ + D LK+ DFGLAR N V T WYR PE++L
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 202
Query: 239 NWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298
Y G P +D A EM W R+P +
Sbjct: 203 GERDY---GPP---------------------IDLWGAGCIMAEM-------WTRSPIMQ 231
Query: 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLT--KKDFRQVFKG 356
N T+ HQL LI ++ G+ E + D+ Y L L+ K+ + K
Sbjct: 232 GN------TEQHQLALISQLCGSITPEVWPNV--DNYELY-EKLELVKGQKRKVKDRLKA 282
Query: 357 --ANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+P A+ +RI ++ AL H + +SDP
Sbjct: 283 YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF--WSDP 320
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 146/340 (42%), Gaps = 62/340 (18%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
+ + +F +F A +G KVA+KK+ + RE+++L+ + HENV+ L++
Sbjct: 26 IGQGTFGEVFK-ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 132 VFHS-----NTCLADFKNVY-MVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
+ + N C V+ H + L+N+L LS+ ++ ++ +L GL YIH
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIH 142
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLARP-------TENEMTGYVATRWYRAPEIML 238
I+HRD+K +N+ + D LK+ DFGLAR N V T WYR PE++L
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 202
Query: 239 NWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298
Y G P +D A EM W R+P +
Sbjct: 203 GERDY---GPP---------------------IDLWGAGCIMAEM-------WTRSPIMQ 231
Query: 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLT--KKDFRQVFKG 356
N T+ HQL LI ++ G+ E + D+ Y L L+ K+ + K
Sbjct: 232 GN------TEQHQLALISQLCGSITPEVWPNV--DNYELY-EKLELVKGQKRKVKDRLKA 282
Query: 357 --ANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+P A+ +RI ++ AL H + +SDP
Sbjct: 283 YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF--WSDP 320
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 146/340 (42%), Gaps = 62/340 (18%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
+ + +F +F A +G KVA+KK+ + RE+++L+ + HENV+ L++
Sbjct: 25 IGQGTFGEVFK-ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 132 VFHS-----NTCLADFKNVY-MVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
+ + N C V+ H + L+N+L LS+ ++ ++ +L GL YIH
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIH 141
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-------NEMTGYVATRWYRAPEIML 238
I+HRD+K +N+ + D LK+ DFGLAR N V T WYR PE++L
Sbjct: 142 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 201
Query: 239 NWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298
Y G P +D A EM W R+P +
Sbjct: 202 GERDY---GPP---------------------IDLWGAGCIMAEM-------WTRSPIMQ 230
Query: 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLT--KKDFRQVFKG 356
N T+ HQL LI ++ G+ E + D+ Y L L+ K+ + K
Sbjct: 231 GN------TEQHQLALISQLCGSITPEVWPNV--DNYELY-EKLELVKGQKRKVKDRLKA 281
Query: 357 --ANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+P A+ +RI ++ AL H + +SDP
Sbjct: 282 YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF--WSDP 319
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 36 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 147
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 148 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 205
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 206 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 227
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 228 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 284
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 285 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 317
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 32 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 201
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 202 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 223
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 281 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 33 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 144
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 145 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 202
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 203 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 224
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 225 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 281
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 282 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 314
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 32 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 201
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 202 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 223
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 281 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 131/317 (41%), Gaps = 55/317 (17%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143
A+D+V+ VAIK+I + RE+ +LK + H N+I L V H N
Sbjct: 53 AIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN------H 106
Query: 144 NVYMVTHLMGADLNNIL-RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSN--IA 200
++++ DL + + +S ++ +YQ++ G+ + HS +HRDLKP N ++
Sbjct: 107 RLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLS 166
Query: 201 VNEDCE---LKILDFGLARPTE---NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQD 254
V++ E LKI DFGLAR + T + T WYR PEI+L HY+ T V +
Sbjct: 167 VSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYS-TSVDIW--- 222
Query: 255 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNL 314
+A W A +M + ++I QL
Sbjct: 223 -------------------------------SIACIW--AEMLMKTPLFPGDSEIDQLFK 249
Query: 315 IMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXX- 373
I E+LG P +++ K S P K ++V
Sbjct: 250 IFEVLGLPDDTTWPGVTALPDWK--QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDP 307
Query: 374 XKRITAEQALAHPYLSQ 390
KRI+A+ AL HPY S
Sbjct: 308 VKRISAKNALEHPYFSH 324
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 44 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 155
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 213
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 214 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 235
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 236 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 292
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 293 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 325
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 51 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 162
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 163 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 220
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 221 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 242
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 243 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 299
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 300 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 332
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 66 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 177
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 235
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 236 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 257
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 258 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 314
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 315 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 347
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 44 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 155
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 213
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 214 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 235
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 236 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 292
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 293 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 325
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 64/333 (19%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF +++ + L SG VAIKK+ + KR REL++++ ++H N++ L F+
Sbjct: 40 SFGVVYQAKLCD-SGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGI 189
S+ D + +V + + + R Q L +V+ +YQ+ R L YIHS GI
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 151
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFG----LARPTENEMTGYVATRWYRAPEIMLNWMHYN 244
HRD+KP N+ ++ D LK+ DFG L R N + +R+YRAPE++ Y
Sbjct: 152 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRAPELIFGATDYT 209
Query: 245 QTGVPFYFQDLKPSNIAV-NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303
S+I V + C L L G +
Sbjct: 210 -------------SSIDVWSAGCVLAELLLG-------------------------QPIF 231
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAI 362
+ + QL I+++LGTP E + +++ + P + + +VF+ P+AI
Sbjct: 232 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE---FKFPQIKAHPWTKVFRPRTPPEAI 288
Query: 363 XXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
R+T +A AH + + DPN
Sbjct: 289 ALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 321
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
+ + S+ ++F + +G VAIKK V K RE+RMLK + H N++ LL+
Sbjct: 11 IGEGSYGVVFKCR-NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 132 VFHSNTCLADFKNVYMVTHLMGAD-LNNILRTQKLSDDH-VQFLVYQILRGLKYIHSAGI 189
VF + +++V L+ + R Q+ +H V+ + +Q L+ + + H
Sbjct: 70 VFRRK------RRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 190 IHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYN 244
IHRD+KP NI + + +K+ DFG AR Y VATRWYR+PE+++ Y
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 33/174 (18%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHY----- 304
+D+KP NI + + +K+ DFG AR Y VATRWYR+PE+++ Y
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVD 185
Query: 305 -------------------NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLL 345
++D+ QL LI + LG S++ +Y + + +
Sbjct: 186 VWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN---QYFSGVKIP 242
Query: 346 TKKDFRQV---FKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPND 396
+D + F + A+ +R+T EQ L HPY + D
Sbjct: 243 DPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED 296
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRE---LRMLKHMNHENVIGLLDVFHSNTCLA 140
A D SG VA+K + P T RE LR L+ H NV+ L+DV ++
Sbjct: 23 ARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 82
Query: 141 DFKNVYMVTHLMGADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
+ K + H+ DL L L + ++ L+ Q LRGL ++H+ I+HRDLKP
Sbjct: 83 EIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 198 NIAVNEDCELKILDFGLARPTENEMTGY--VATRWYRAPEIMLN 239
NI V +K+ DFGLAR +M + V T WYRAPE++L
Sbjct: 142 NILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQ 185
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 27/175 (15%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGY--VATRWYRAP 295
L+++H N +DLKP NI V +K+ DFGLAR +M + V T WYRAP
Sbjct: 125 LDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAP 180
Query: 296 EIMLNWMHYNQTDIHQLNLIM-EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDF---- 350
E++L + D+ + I EM P F +D K + + L + D+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPL-FCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
Query: 351 ---RQVFKGANPQAIXXXXXXXXXXXX------------KRITAEQALAHPYLSQ 390
R F P+ + KRI+A +AL H YL +
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 153/355 (43%), Gaps = 64/355 (18%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR-TYRELRMLKHMNHENVIGLLDVFH 134
SF ++F + L V +VAIKK+ + KR REL++++ + H NV+ L F+
Sbjct: 52 SFGVVFQAKL--VESDEVAIKKV-------LQDKRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 135 SNTCLAD--FKNV---YMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI 189
SN D F N+ Y+ + A + Q + ++ +YQ+LR L YIHS GI
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI 162
Query: 190 IHRDLKPSNIAVNEDCE-LKILDFGLAR--PTENEMTGYVATRWYRAPEIMLNWMHYNQT 246
HRD+KP N+ ++ LK++DFG A+ + +R+YRAPE++ +Y
Sbjct: 163 CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYT-- 220
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+NI + TG V + + +
Sbjct: 221 -----------TNIDIWS-------------------TGCVMAELMQG-----QPLFPGE 245
Query: 307 TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-PQAIXXX 365
+ I QL I+++LGTP E +I + + + P + F +VF+ P AI
Sbjct: 246 SGIDQLVEIIKVLGTPSRE---QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLI 302
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYSD-----PNDEPTSPPYDQSFEDMDLPVD 415
R+TA +AL HP+ + PN P ++ + E++ + D
Sbjct: 303 SRLLEYTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEELSVRPD 357
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 129/319 (40%), Gaps = 73/319 (22%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN---HENVIGLLDVFHSNTCLADFKNV 145
G VA+K++ T RE+ +L+H+ H NV+ L DV + + K
Sbjct: 36 GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95
Query: 146 YMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+ H + DL L + + ++ +++Q+LRGL ++HS ++HRDLKP NI V
Sbjct: 96 LVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT 154
Query: 203 EDCELKILDFGLARPTENEM--TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI 260
++K+ DFGLAR +M T V T WYRAPE++L +
Sbjct: 155 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY------------------ 196
Query: 261 AVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLG 320
A P + G + +R + +D+ QL I++++G
Sbjct: 197 ---------------ATPVDLWSVGCIFAEMFRRKPLF-----RGSSDVDQLGKILDVIG 236
Query: 321 TP-----------PAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXX 369
P P + S+ K++ + L K + NP
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT-FNP---------- 285
Query: 370 XXXXXKRITAEQALAHPYL 388
KRI+A AL+HPY
Sbjct: 286 ----AKRISAYSALSHPYF 300
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 54 FNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
F + Y+ +C L K SF + D ++ + A+K I + R
Sbjct: 20 FAERYNIVC--------MLGKGSFGEVLKCK-DRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL-MGADL-NNILRTQKLSDDHVQ 171
E+ +LK ++H N++ L ++ L D + Y+V L G +L + I++ ++ S+
Sbjct: 71 EVELLKKLDHPNIMKLFEI------LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLARPTEN--EMTGYV 226
++ Q+ G+ Y+H I+HRDLKP NI + +DC++KI+DFGL+ + +M +
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 227 ATRWYRAPEIM 237
T +Y APE++
Sbjct: 185 GTAYYIAPEVL 195
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 24/152 (15%)
Query: 253 QDLKPSNIAVN---EDCELKILDFGLARPTEN--EMTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP NI + +DC++KI+DFGL+ + +M + T +Y APE+ L + +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKC 203
Query: 308 DIHQLNLIMEML--GTPPAEFMAKISSDSAR-----KYINSLPLLTKKDFRQVFKGANPQ 360
D+ +I+ +L GTPP F K D + KY LP ++ +
Sbjct: 204 DVWSAGVILYILLSGTPP--FYGKNEYDILKRVETGKYAFDLP---------QWRTISDD 252
Query: 361 AIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
A RITA Q L HP++ +YS
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 129/319 (40%), Gaps = 73/319 (22%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN---HENVIGLLDVFHSNTCLADFKNV 145
G VA+K++ T RE+ +L+H+ H NV+ L DV + + K
Sbjct: 36 GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95
Query: 146 YMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+ H + DL L + + ++ +++Q+LRGL ++HS ++HRDLKP NI V
Sbjct: 96 LVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT 154
Query: 203 EDCELKILDFGLARPTENEM--TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI 260
++K+ DFGLAR +M T V T WYRAPE++L +
Sbjct: 155 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY------------------ 196
Query: 261 AVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLG 320
A P + G + +R + +D+ QL I++++G
Sbjct: 197 ---------------ATPVDLWSVGCIFAEMFRRKPLF-----RGSSDVDQLGKILDVIG 236
Query: 321 TP-----------PAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXX 369
P P + S+ K++ + L K + NP
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT-FNP---------- 285
Query: 370 XXXXXKRITAEQALAHPYL 388
KRI+A AL+HPY
Sbjct: 286 ----AKRISAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 129/319 (40%), Gaps = 73/319 (22%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN---HENVIGLLDVFHSNTCLADFKNV 145
G VA+K++ T RE+ +L+H+ H NV+ L DV + + K
Sbjct: 36 GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95
Query: 146 YMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
+ H + DL L + + ++ +++Q+LRGL ++HS ++HRDLKP NI V
Sbjct: 96 LVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT 154
Query: 203 EDCELKILDFGLARPTENEM--TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI 260
++K+ DFGLAR +M T V T WYRAPE++L +
Sbjct: 155 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY------------------ 196
Query: 261 AVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLG 320
A P + G + +R + +D+ QL I++++G
Sbjct: 197 ---------------ATPVDLWSVGCIFAEMFRRKPLF-----RGSSDVDQLGKILDVIG 236
Query: 321 TP-----------PAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXX 369
P P + S+ K++ + L K + NP
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT-FNP---------- 285
Query: 370 XXXXXKRITAEQALAHPYL 388
KRI+A AL+HPY
Sbjct: 286 ----AKRISAYSALSHPYF 300
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRE---LRMLKHMNHENVIGLLDVFHSNTCLA 140
A D SG VA+K + P T RE LR L+ H NV+ L+DV ++
Sbjct: 23 ARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 82
Query: 141 DFKNVYMVTHLMGADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
+ K + H+ DL L L + ++ L+ Q LRGL ++H+ I+HRDLKP
Sbjct: 83 EIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 198 NIAVNEDCELKILDFGLARPTENEM--TGYVATRWYRAPEIMLN 239
NI V +K+ DFGLAR +M V T WYRAPE++L
Sbjct: 142 NILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQ 185
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 71/175 (40%), Gaps = 27/175 (15%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEM--TGYVATRWYRAP 295
L+++H N +DLKP NI V +K+ DFGLAR +M V T WYRAP
Sbjct: 125 LDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAP 180
Query: 296 EIMLNWMHYNQTDIHQLNLIM-EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDF---- 350
E++L + D+ + I EM P F +D K + + L + D+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPL-FCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
Query: 351 ---RQVFKGANPQAIXXXXXXXXXXXX------------KRITAEQALAHPYLSQ 390
R F P+ + KRI+A +AL H YL +
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRE---LRMLKHMNHENVIGLLDVFHSNTCLA 140
A D SG VA+K + P T RE LR L+ H NV+ L+DV ++
Sbjct: 23 ARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 82
Query: 141 DFKNVYMVTHLMGADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
+ K + H+ DL L L + ++ L+ Q LRGL ++H+ I+HRDLKP
Sbjct: 83 EIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 198 NIAVNEDCELKILDFGLARPTENEMT--GYVATRWYRAPEIMLN 239
NI V +K+ DFGLAR +M V T WYRAPE++L
Sbjct: 142 NILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQ 185
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 71/175 (40%), Gaps = 27/175 (15%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMT--GYVATRWYRAP 295
L+++H N +DLKP NI V +K+ DFGLAR +M V T WYRAP
Sbjct: 125 LDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAP 180
Query: 296 EIMLNWMHYNQTDIHQLNLIM-EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDF---- 350
E++L + D+ + I EM P F +D K + + L + D+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPL-FCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
Query: 351 ---RQVFKGANPQAIXXXXXXXXXXXX------------KRITAEQALAHPYLSQ 390
R F P+ + KRI+A +AL H YL +
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 54 FNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
F + Y+ +C L K SF + D ++ + A+K I + R
Sbjct: 20 FAERYNIVC--------MLGKGSFGEVLKCK-DRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL-MGADL-NNILRTQKLSDDHVQ 171
E+ +LK ++H N++ L ++ L D + Y+V L G +L + I++ ++ S+
Sbjct: 71 EVELLKKLDHPNIMKLFEI------LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLARPTEN--EMTGYV 226
++ Q+ G+ Y+H I+HRDLKP NI + +DC++KI+DFGL+ + +M +
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 227 ATRWYRAPEIM 237
T +Y APE++
Sbjct: 185 GTAYYIAPEVL 195
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 24/152 (15%)
Query: 253 QDLKPSNIAVN---EDCELKILDFGLARPTEN--EMTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP NI + +DC++KI+DFGL+ + +M + T +Y APE+ L + +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKC 203
Query: 308 DIHQLNLIMEML--GTPPAEFMAKISSDSAR-----KYINSLPLLTKKDFRQVFKGANPQ 360
D+ +I+ +L GTPP F K D + KY LP ++ +
Sbjct: 204 DVWSAGVILYILLSGTPP--FYGKNEYDILKRVETGKYAFDLPQ---------WRTISDD 252
Query: 361 AIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
A RITA Q L HP++ +YS
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 54 FNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYR 113
F + Y+ +C L K SF + D ++ + A+K I + R
Sbjct: 20 FAERYNIVC--------MLGKGSFGEVLKCK-DRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL-MGADL-NNILRTQKLSDDHVQ 171
E+ +LK ++H N++ L ++ L D + Y+V L G +L + I++ ++ S+
Sbjct: 71 EVELLKKLDHPNIMKLFEI------LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLARPTEN--EMTGYV 226
++ Q+ G+ Y+H I+HRDLKP NI + +DC++KI+DFGL+ + +M +
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 227 ATRWYRAPEIM 237
T +Y APE++
Sbjct: 185 GTAYYIAPEVL 195
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 24/152 (15%)
Query: 253 QDLKPSNIAVN---EDCELKILDFGLARPTEN--EMTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP NI + +DC++KI+DFGL+ + +M + T +Y APE+ L + +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKC 203
Query: 308 DIHQLNLIMEML--GTPPAEFMAKISSDSAR-----KYINSLPLLTKKDFRQVFKGANPQ 360
D+ +I+ +L GTPP F K D + KY LP ++ +
Sbjct: 204 DVWSAGVILYILLSGTPP--FYGKNEYDILKRVETGKYAFDLPQ---------WRTISDD 252
Query: 361 AIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
A RITA Q L HP++ +YS
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAK---RTYRE---LRMLKHMNHENVIGLLDVFHSNT 137
A D SG VA+K + P T RE LR L+ H NV+ L+DV ++
Sbjct: 28 ARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87
Query: 138 CLADFKNVYMVTHLMGADLNNILRTQK---LSDDHVQFLVYQILRGLKYIHSAGIIHRDL 194
+ K + H+ DL L L + ++ L+ Q LRGL ++H+ I+HRDL
Sbjct: 88 TDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 146
Query: 195 KPSNIAVNEDCELKILDFGLARPTENEM--TGYVATRWYRAPEIMLN 239
KP NI V +K+ DFGLAR +M T V T WYRAPE++L
Sbjct: 147 KPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ 193
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 27/175 (15%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEM--TGYVATRWYRAP 295
L+++H N +DLKP NI V +K+ DFGLAR +M T V T WYRAP
Sbjct: 133 LDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAP 188
Query: 296 EIMLNWMHYNQTDIHQLNLIM-EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDF---- 350
E++L + D+ + I EM P F +D K + + L + D+
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEMFRRKPL-FCGNSEADQLGKIFDLIGLPPEDDWPRDV 247
Query: 351 ---RQVFKGANPQAIXXXXXXXXXXXX------------KRITAEQALAHPYLSQ 390
R F P+ + KRI+A +AL H YL +
Sbjct: 248 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 86 DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145
D V+ V+ AIK I + S + E+ +LK ++H N++ L D F D +N
Sbjct: 58 DKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE------DKRNY 111
Query: 146 YMVTHL-MGADL-NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---A 200
Y+V G +L + I+ K ++ ++ Q+L G+ Y+H I+HRDLKP N+ +
Sbjct: 112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLES 171
Query: 201 VNEDCELKILDFGLARPTENE--MTGYVATRWYRAPEIM 237
+D +KI+DFGL+ EN+ M + T +Y APE++
Sbjct: 172 KEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL 210
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 39/223 (17%)
Query: 207 LKILDFGLARPTENEMTGYVATRWYRAPEI---MLNWMHYNQ-----------TGVPFYF 252
+K+ DF E++ Y+ Y+ E+ +++ M +N+ +GV +
Sbjct: 99 MKLYDF-----FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH 153
Query: 253 Q------DLKPSNIAVN---EDCELKILDFGLARPTENE--MTGYVATRWYRAPEIMLNW 301
+ DLKP N+ + +D +KI+DFGL+ EN+ M + T +Y APE+ L
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRK 212
Query: 302 MHYNQTDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANP 359
+ + D+ + +I+ +L G PP F + + RK +++ V +GA
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPP--FGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKD 270
Query: 360 QAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPP 402
+RI+A+QAL HP++ + + P
Sbjct: 271 ----LIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELP 309
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 19/132 (14%)
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLV 174
+L++ H N+I L DV+ D K+VY+VT LM G L+ ILR + S+ F++
Sbjct: 74 LLRYGQHPNIITLKDVYD------DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL 127
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNI-----AVNEDCELKILDFGLARPTENEMTGYVATR 229
+ I + ++Y+HS G++HRDLKPSNI + N +C L+I DFG A+ E G + T
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAE-NGLLMTP 185
Query: 230 WYR----APEIM 237
Y APE++
Sbjct: 186 CYTANFVAPEVL 197
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIA-RPFQSAVHAKRTYRELRMLKHMNHENVIGL 129
L K SF + D ++G + A+K I+ R + + RE+++LK ++H N++ L
Sbjct: 39 VLGKGSFGEVILCK-DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 130 LDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI 189
+ F VY L + I+ ++ S+ ++ Q+L G+ Y+H I
Sbjct: 98 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKI 153
Query: 190 IHRDLKPSNIAV---NEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+HRDLKP N+ + ++D ++I+DFGL+ E +M + T +Y APE++
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 206
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 30/179 (16%)
Query: 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV---NEDCELKILDFGLARPTE--N 281
A R R + +MH N+ +DLKP N+ + ++D ++I+DFGL+ E
Sbjct: 134 AARIIRQVLSGITYMHKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 189
Query: 282 EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPP------AEFMAKISSD 333
+M + T +Y APE+ L+ + + D+ +I+ +L G PP + + K+
Sbjct: 190 KMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 248
Query: 334 SARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
KY LP +K + A RI+A AL H ++ Y+
Sbjct: 249 ---KYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 295
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIA-RPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
L K SF + D ++G + A+K I+ R + + RE+++LK ++H N++ L
Sbjct: 57 LGKGSFGEVILCK-DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGII 190
+ F VY L + I+ ++ S+ ++ Q+L G+ Y+H I+
Sbjct: 116 EFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 171
Query: 191 HRDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
HRDLKP N+ + ++D ++I+DFGL+ E +M + T +Y APE++
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 223
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 34/210 (16%)
Query: 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI---AVNEDCELKILDFGLARPTE--N 281
A R R + +MH N+ +DLKP N+ + ++D ++I+DFGL+ E
Sbjct: 151 AARIIRQVLSGITYMHKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 206
Query: 282 EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPP------AEFMAKISSD 333
+M + T +Y APE+ L+ + + D+ +I+ +L G PP + + K+
Sbjct: 207 KMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 265
Query: 334 SARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSD 393
KY LP +K + A RI+A AL H ++ Y+
Sbjct: 266 ---KYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK 313
Query: 394 PNDEPTSPPYDQSFEDMDLPVDQWKGTYSL 423
P D + L + Q++GT L
Sbjct: 314 EQISVDVPSLDNAI----LNIRQFQGTQKL 339
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 19/132 (14%)
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLV 174
+L++ H N+I L DV+ D K+VY+VT LM G L+ ILR + S+ F++
Sbjct: 74 LLRYGQHPNIITLKDVYD------DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL 127
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNI-----AVNEDCELKILDFGLARPTENEMTGYVATR 229
+ I + ++Y+HS G++HRDLKPSNI + N +C L+I DFG A+ E G + T
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAE-NGLLMTP 185
Query: 230 WYR----APEIM 237
Y APE++
Sbjct: 186 CYTANFVAPEVL 197
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIA-RPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
L K SF + D ++G + A+K I+ R + + RE+++LK ++H N++ L
Sbjct: 58 LGKGSFGEVILCK-DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGII 190
+ F VY L + I+ ++ S+ ++ Q+L G+ Y+H I+
Sbjct: 117 EFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 172
Query: 191 HRDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
HRDLKP N+ + ++D ++I+DFGL+ E +M + T +Y APE++
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 224
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 34/210 (16%)
Query: 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI---AVNEDCELKILDFGLARPTE--N 281
A R R + +MH N+ +DLKP N+ + ++D ++I+DFGL+ E
Sbjct: 152 AARIIRQVLSGITYMHKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 207
Query: 282 EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPP------AEFMAKISSD 333
+M + T +Y APE+ L+ + + D+ +I+ +L G PP + + K+
Sbjct: 208 KMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 266
Query: 334 SARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSD 393
KY LP +K + A RI+A AL H ++ Y+
Sbjct: 267 ---KYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK 314
Query: 394 PNDEPTSPPYDQSFEDMDLPVDQWKGTYSL 423
P D + L + Q++GT L
Sbjct: 315 EQISVDVPSLDNAI----LNIRQFQGTQKL 340
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIA-RPFQSAVHAKRTYRELRMLKHMNHENVIGL 129
L K SF + D ++G + A+K I+ R + + RE+++LK ++H N++ L
Sbjct: 33 VLGKGSFGEVILCK-DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 130 LDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI 189
+ F VY L + I+ ++ S+ ++ Q+L G+ Y+H I
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKI 147
Query: 190 IHRDLKPSNIAV---NEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+HRDLKP N+ + ++D ++I+DFGL+ E +M + T +Y APE++
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 200
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 34/210 (16%)
Query: 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAV---NEDCELKILDFGLARPTE--N 281
A R R + +MH N+ +DLKP N+ + ++D ++I+DFGL+ E
Sbjct: 128 AARIIRQVLSGITYMHKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
Query: 282 EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPP------AEFMAKISSD 333
+M + T +Y APE+ L+ + + D+ +I+ +L G PP + + K+
Sbjct: 184 KMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242
Query: 334 SARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSD 393
KY LP +K + A RI+A AL H ++ Y+
Sbjct: 243 ---KYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK 290
Query: 394 PNDEPTSPPYDQSFEDMDLPVDQWKGTYSL 423
P D + L + Q++GT L
Sbjct: 291 EQISVDVPSLDNAI----LNIRQFQGTQKL 316
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 24/154 (15%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDH--- 169
RE+ +L+ + H NVI L VF S+ AD + V+++ DL +I++ + S +
Sbjct: 67 REIALLRELKHPNVISLQKVFLSH---AD-RKVWLLFDYAEHDLWHIIKFHRASKANKKP 122
Query: 170 -------VQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV----NEDCELKILDFGLARPT 218
V+ L+YQIL G+ Y+H+ ++HRDLKP+NI V E +KI D G AR
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 219 EN------EMTGYVATRWYRAPEIMLNWMHYNQT 246
+ ++ V T WYRAPE++L HY +
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKA 216
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 237 MLNWMHYNQTGVPFYFQDLKPSNIAV----NEDCELKILDFGLARPTEN------EMTGY 286
+L+ +HY + +DLKP+NI V E +KI D G AR + ++
Sbjct: 137 ILDGIHYLHANWVLH-RDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 195
Query: 287 VATRWYRAPEIMLNWMHYNQT-DIHQLNLIM-EMLGTPP 323
V T WYRAPE++L HY + DI + I E+L + P
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 234
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 22/178 (12%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
L K ++ ++++ D + V++AIK+I P + + +++ + E+ + KH+ H+N++ L
Sbjct: 29 VLGKGTYGIVYA-GRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILRTQ----KLSDDHVQFLVYQILRGLKYIHS 186
F N F ++M + G L+ +LR++ K ++ + F QIL GLKY+H
Sbjct: 86 GSFSENG----FIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 187 AGIIHRDLKPSNIAVNE-DCELKILDFGLAR------PTENEMTGYVATRWYRAPEIM 237
I+HRD+K N+ +N LKI DFG ++ P TG T Y APEI+
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG---TLQYMAPEII 195
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 22/178 (12%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
L K ++ ++++ D + V++AIK+I P + + +++ + E+ + KH+ H+N++ L
Sbjct: 15 VLGKGTYGIVYAGR-DLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILRTQ----KLSDDHVQFLVYQILRGLKYIHS 186
F N F ++M + G L+ +LR++ K ++ + F QIL GLKY+H
Sbjct: 72 GSFSENG----FIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 187 AGIIHRDLKPSNIAVNE-DCELKILDFGLAR------PTENEMTGYVATRWYRAPEIM 237
I+HRD+K N+ +N LKI DFG ++ P TG T Y APEI+
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG---TLQYMAPEII 181
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 78/131 (59%), Gaps = 8/131 (6%)
Query: 109 KRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSD 167
++ Y+E+ +LK ++H NV+ L++V + ++YMV L+ + + + LS+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDD----PNEDHLYMVFELVNQGPVMEVPTLKPLSE 136
Query: 168 DHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA---RPTENEMTG 224
D +F +++G++Y+H IIHRD+KPSN+ V ED +KI DFG++ + ++ ++
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196
Query: 225 YVATRWYRAPE 235
V T + APE
Sbjct: 197 TVGTPAFMAPE 207
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRA 294
+ ++HY + +D+KPSN+ V ED +KI DFG++ + ++ ++ V T + A
Sbjct: 150 IEYLHYQK----IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMA 205
Query: 295 PE 296
PE
Sbjct: 206 PE 207
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 84 ALDSVSGVKVAIKKIA-RPF-----QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137
A + + KVAIK I+ R F + A A E+ +LK +NH +I + + F
Sbjct: 28 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF---- 83
Query: 138 CLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
D ++ Y+V LM G + ++ ++L + + YQ+L ++Y+H GIIHRDLK
Sbjct: 84 ---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 140
Query: 196 PSNIAVN---EDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLN 239
P N+ ++ EDC +KI DFG ++ + M T Y APE++++
Sbjct: 141 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 189
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVN---EDCELKILDFGLAR--PTENEMTGYVAT 289
+++L + ++ G+ +DLKP N+ ++ EDC +KI DFG ++ + M T
Sbjct: 121 QMLLAVQYLHENGI--IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 178
Query: 290 RWYRAPEIMLN--WMHYNQT-DIHQLNLIMEML--GTPP-AEFMAKISSD---SARKYIN 340
Y APE++++ YN+ D L +I+ + G PP +E ++S ++ KY N
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-N 237
Query: 341 SLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
+P +V+ + +A+ R T E+AL HP+L
Sbjct: 238 FIP--------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 277
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 84 ALDSVSGVKVAIKKIA-RPF-----QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137
A + + KVAIK I+ R F + A A E+ +LK +NH +I + + F
Sbjct: 29 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF---- 84
Query: 138 CLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
D ++ Y+V LM G + ++ ++L + + YQ+L ++Y+H GIIHRDLK
Sbjct: 85 ---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 141
Query: 196 PSNIAVN---EDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLN 239
P N+ ++ EDC +KI DFG ++ + M T Y APE++++
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVN---EDCELKILDFGLAR--PTENEMTGYVAT 289
+++L + ++ G+ +DLKP N+ ++ EDC +KI DFG ++ + M T
Sbjct: 122 QMLLAVQYLHENGI--IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 290 RWYRAPEIMLN--WMHYNQT-DIHQLNLIMEML--GTPP-AEFMAKISSD---SARKYIN 340
Y APE++++ YN+ D L +I+ + G PP +E ++S ++ KY N
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-N 238
Query: 341 SLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
+P +V+ + +A+ R T E+AL HP+L
Sbjct: 239 FIP--------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 84 ALDSVSGVKVAIKKIA-RPF-----QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137
A + + KVAIK I+ R F + A A E+ +LK +NH +I + + F
Sbjct: 29 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF---- 84
Query: 138 CLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
D ++ Y+V LM G + ++ ++L + + YQ+L ++Y+H GIIHRDLK
Sbjct: 85 ---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 141
Query: 196 PSNIAVN---EDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLN 239
P N+ ++ EDC +KI DFG ++ + M T Y APE++++
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVN---EDCELKILDFGLAR--PTENEMTGYVAT 289
+++L + ++ G+ +DLKP N+ ++ EDC +KI DFG ++ + M T
Sbjct: 122 QMLLAVQYLHENGI--IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 290 RWYRAPEIMLN--WMHYNQT-DIHQLNLIMEML--GTPP-AEFMAKISSD---SARKYIN 340
Y APE++++ YN+ D L +I+ + G PP +E ++S ++ KY N
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-N 238
Query: 341 SLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
+P +V+ + +A+ R T E+AL HP+L
Sbjct: 239 FIP--------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 84 ALDSVSGVKVAIKKIA-RPF-----QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137
A + + KVAIK I+ R F + A A E+ +LK +NH +I + + F
Sbjct: 29 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF---- 84
Query: 138 CLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
D ++ Y+V LM G + ++ ++L + + YQ+L ++Y+H GIIHRDLK
Sbjct: 85 ---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 141
Query: 196 PSNIAVN---EDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLN 239
P N+ ++ EDC +KI DFG ++ + M T Y APE++++
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVN---EDCELKILDFGLAR--PTENEMTGYVAT 289
+++L + ++ G+ +DLKP N+ ++ EDC +KI DFG ++ + M T
Sbjct: 122 QMLLAVQYLHENGI--IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 290 RWYRAPEIMLN--WMHYNQT-DIHQLNLIMEML--GTPP-AEFMAKISSD---SARKYIN 340
Y APE++++ YN+ D L +I+ + G PP +E ++S ++ KY N
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-N 238
Query: 341 SLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
+P +V+ + +A+ R T E+AL HP+L
Sbjct: 239 FIP--------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 84 ALDSVSGVKVAIKKIA-RPF-----QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137
A + + KVAIK I+ R F + A A E+ +LK +NH +I + + F
Sbjct: 35 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF---- 90
Query: 138 CLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
D ++ Y+V LM G + ++ ++L + + YQ+L ++Y+H GIIHRDLK
Sbjct: 91 ---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 147
Query: 196 PSNIAVN---EDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLN 239
P N+ ++ EDC +KI DFG ++ + M T Y APE++++
Sbjct: 148 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 196
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVN---EDCELKILDFGLAR--PTENEMTGYVAT 289
+++L + ++ G+ +DLKP N+ ++ EDC +KI DFG ++ + M T
Sbjct: 128 QMLLAVQYLHENGI--IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 185
Query: 290 RWYRAPEIMLN--WMHYNQT-DIHQLNLIMEML--GTPP-AEFMAKISSD---SARKYIN 340
Y APE++++ YN+ D L +I+ + G PP +E ++S ++ KY N
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-N 244
Query: 341 SLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
+P +V+ + +A+ R T E+AL HP+L
Sbjct: 245 FIP--------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 284
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 22/179 (12%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG++ IK I + +S V ++ E+ +LK ++H N+I + +VF D+ N+Y+V
Sbjct: 46 SGLERVIKTINKD-RSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE------DYHNMYIV 98
Query: 149 --THLMGADLNNIL----RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
T G L I+ R + LS+ +V L+ Q++ L Y HS ++H+DLKP NI
Sbjct: 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQ 158
Query: 203 ED---CELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLNWMHYN----QTGVPFYF 252
+ +KI+DFGLA ++ T T Y APE+ + + GV YF
Sbjct: 159 DTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYF 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQ 171
E+ +LK + HEN++ L D++ S T + Y+V L+ G + IL ++
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTT------HYYLVMQLVSGGELFDRILERGVYTEKDAS 109
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLARPTENE-MTGYVA 227
++ Q+L +KY+H GI+HRDLKP N+ E+ ++ I DFGL++ +N M+
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACG 169
Query: 228 TRWYRAPEIM 237
T Y APE++
Sbjct: 170 TPGYVAPEVL 179
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIA-RPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
L K SF + D ++G + A+K I+ R + + RE+++LK ++H N+ L
Sbjct: 34 LGKGSFGEVILCK-DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGII 190
+ F VY L + I+ ++ S+ ++ Q+L G+ Y H I+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIV 148
Query: 191 HRDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
HRDLKP N+ + ++D ++I+DFGL+ E + + T +Y APE++
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL 200
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 34/210 (16%)
Query: 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI---AVNEDCELKILDFGLARPTE--N 281
A R R + + H N+ +DLKP N+ + ++D ++I+DFGL+ E
Sbjct: 128 AARIIRQVLSGITYXHKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
Query: 282 EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPP------AEFMAKISSD 333
+ + T +Y APE+ L+ + + D+ +I+ +L G PP + + K+
Sbjct: 184 KXKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242
Query: 334 SARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSD 393
KY LP +K + A RI+A AL H ++ Y+
Sbjct: 243 ---KYTFELPQ---------WKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTK 290
Query: 394 PNDEPTSPPYDQSFEDMDLPVDQWKGTYSL 423
P D + L + Q++GT L
Sbjct: 291 EQISVDVPSLDNAI----LNIRQFQGTQKL 316
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 84 ALDSVSGVKVAIKKIA-RPF-----QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137
A + + KVAI+ I+ R F + A A E+ +LK +NH +I + + F
Sbjct: 154 AFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF---- 209
Query: 138 CLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
D ++ Y+V LM G + ++ ++L + + YQ+L ++Y+H GIIHRDLK
Sbjct: 210 ---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 266
Query: 196 PSNIAVN---EDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLN 239
P N+ ++ EDC +KI DFG ++ + M T Y APE++++
Sbjct: 267 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 315
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVN---EDCELKILDFGLAR--PTENEMTGYVAT 289
+++L + ++ G+ +DLKP N+ ++ EDC +KI DFG ++ + M T
Sbjct: 247 QMLLAVQYLHENGI--IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 304
Query: 290 RWYRAPEIMLN--WMHYNQT-DIHQLNLIMEML--GTPP-AEFMAKISSD---SARKYIN 340
Y APE++++ YN+ D L +I+ + G PP +E ++S ++ KY N
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-N 363
Query: 341 SLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
+P +V+ + +A+ R T E+AL HP+L
Sbjct: 364 FIP--------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 84 ALDSVSGVKVAIKKIA-RPF-----QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137
A + + KVAI+ I+ R F + A A E+ +LK +NH +I + + F
Sbjct: 168 AFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF---- 223
Query: 138 CLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
D ++ Y+V LM G + ++ ++L + + YQ+L ++Y+H GIIHRDLK
Sbjct: 224 ---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 280
Query: 196 PSNIAVN---EDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIMLN 239
P N+ ++ EDC +KI DFG ++ + M T Y APE++++
Sbjct: 281 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 329
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVN---EDCELKILDFGLAR--PTENEMTGYVAT 289
+++L + ++ G+ +DLKP N+ ++ EDC +KI DFG ++ + M T
Sbjct: 261 QMLLAVQYLHENGI--IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 318
Query: 290 RWYRAPEIMLN--WMHYNQ-TDIHQLNLIMEML--GTPP-AEFMAKISSD---SARKYIN 340
Y APE++++ YN+ D L +I+ + G PP +E ++S ++ KY N
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-N 377
Query: 341 SLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
+P +V+ + +A+ R T E+AL HP+L
Sbjct: 378 FIP--------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 417
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 14/160 (8%)
Query: 86 DSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144
D ++G + AIK I + + ++ E+ +LK ++H N++ L + F D +N
Sbjct: 42 DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE------DKRN 95
Query: 145 VYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV- 201
Y+V + G + I+ QK S+ ++ Q+L G Y+H I+HRDLKP N+ +
Sbjct: 96 YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLE 155
Query: 202 --NEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+ D +KI+DFGL+ E +M + T +Y APE++
Sbjct: 156 SKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 253 QDLKPSNIAV---NEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP N+ + + D +KI+DFGL+ E +M + T +Y APE+ L + +
Sbjct: 145 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKC 203
Query: 308 DIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXX 365
D+ +I+ +L G PP F + + ++ D+ QV + +A
Sbjct: 204 DVWSCGVILYILLCGYPP--FGGQTDQEILKRVEKGKFSFDPPDWTQV----SDEAKQLV 257
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQYS 392
KRI+AE+AL HP++ ++
Sbjct: 258 KLMLTYEPSKRISAEEALNHPWIVKFC 284
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
Query: 86 DSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144
D ++G + AIK I + + ++ E+ +LK ++H N++ L + F D +N
Sbjct: 25 DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE------DKRN 78
Query: 145 VYMVTHLM-GADL-NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV- 201
Y+V + G +L + I+ QK S+ ++ Q+L G Y+H I+HRDLKP N+ +
Sbjct: 79 YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLE 138
Query: 202 --NEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+ D +KI+DFGL+ E +M + T +Y APE++
Sbjct: 139 SKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 178
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 253 QDLKPSNIAV---NEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP N+ + + D +KI+DFGL+ E +M + T +Y APE+ L + +
Sbjct: 128 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKC 186
Query: 308 DIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXX 365
D+ +I+ +L G PP F + + ++ D+ QV + +A
Sbjct: 187 DVWSCGVILYILLCGYPP--FGGQTDQEILKRVEKGKFSFDPPDWTQV----SDEAKQLV 240
Query: 366 XXXXXXXXXKRITAEQALAHPYLSQY 391
KRI+AE+AL HP++ ++
Sbjct: 241 KLMLTYEPSKRISAEEALNHPWIVKF 266
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 84 ALDSVSGVKVAIKKI-ARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
A D++ +KVAIK I P + KR RE+ ++H+N++ ++DV + C
Sbjct: 30 AEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY--- 86
Query: 143 KNVYMV-THLMGADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIA 200
Y+V ++ G L+ + + LS D QIL G+K+ H I+HRD+KP NI
Sbjct: 87 ---YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNIL 143
Query: 201 VNEDCELKILDFGLARP-TENEMTG---YVATRWYRAPE 235
++ + LKI DFG+A+ +E +T + T Y +PE
Sbjct: 144 IDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 22/166 (13%)
Query: 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVP------FYFQDLK 256
+DC ++++ + PT +E Y+ + + + +N+ + G+ +D+K
Sbjct: 83 DDCYYLVMEY-IEGPTLSE---YIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIK 138
Query: 257 PSNIAVNEDCELKILDFGLARP-TENEMTG---YVATRWYRAPEIMLNWMHYNQTDIHQL 312
P NI ++ + LKI DFG+A+ +E +T + T Y +PE TDI+ +
Sbjct: 139 PQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSI 198
Query: 313 NLIM-EML-GTPPAEFMAKISSDSARKYI-NSLPLLT---KKDFRQ 352
+++ EML G PP F + + A K+I +S+P +T +KD Q
Sbjct: 199 GIVLYEMLVGEPP--FNGETAVSIAIKHIQDSVPNVTTDVRKDIPQ 242
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 40 SGLIMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 93
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ +++ ++ + + +LRGL Y+ I+HRD+KPSNI VN E
Sbjct: 94 EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE 153
Query: 207 LKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ + M +V TR Y APE L HY+
Sbjct: 154 IKLCDFGVSGQLIDSMANSFVGTRSYMAPE-RLQGTHYS 191
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ + M +V TR Y APE L HY+ Q+DI
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPE-RLQGTHYSVQSDIW 197
Query: 311 QLNL 314
+ L
Sbjct: 198 SMGL 201
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
DIG L F ++ + +G++ A K I +R + V + RE+ +L+ +
Sbjct: 15 DIGEELGSGQFAIV-KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L DV+ + T +V ++ L+ G +L + L + + LS++ + QIL G
Sbjct: 74 HHNVITLHDVYENRT------DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 181 LKYIHSAGIIHRDLKPSNIAVNEDC----ELKILDFGLARPTEN--EMTGYVATRWYRAP 234
+ Y+H+ I H DLKP NI + + +K++DFGLA E+ E T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 235 EIM 237
EI+
Sbjct: 188 EIV 190
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
DIG L F ++ + +G++ A K I +R + V + RE+ +L+ +
Sbjct: 15 DIGEELGSGQFAIV-KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L DV+ + T +V ++ L+ G +L + L + + LS++ + QIL G
Sbjct: 74 HHNVITLHDVYENRT------DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 181 LKYIHSAGIIHRDLKPSNIAVNEDC----ELKILDFGLARPTEN--EMTGYVATRWYRAP 234
+ Y+H+ I H DLKP NI + + +K++DFGLA E+ E T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 235 EIM 237
EI+
Sbjct: 188 EIV 190
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
DIG L F ++ + +G++ A K I +R + V + RE+ +L+ +
Sbjct: 15 DIGEELGSGQFAIV-KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L DV+ + T +V ++ L+ G +L + L + + LS++ + QIL G
Sbjct: 74 HHNVITLHDVYENRT------DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 181 LKYIHSAGIIHRDLKPSNIAVNEDC----ELKILDFGLARPTEN--EMTGYVATRWYRAP 234
+ Y+H+ I H DLKP NI + + +K++DFGLA E+ E T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 235 EIM 237
EI+
Sbjct: 188 EIV 190
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
DIG L F ++ + +G++ A K I +R + V + RE+ +L+ +
Sbjct: 15 DIGEELGSGQFAIV-KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L DV+ + T +V ++ L+ G +L + L + + LS++ + QIL G
Sbjct: 74 HHNVITLHDVYENRT------DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 181 LKYIHSAGIIHRDLKPSNIAVNEDC----ELKILDFGLARPTEN--EMTGYVATRWYRAP 234
+ Y+H+ I H DLKP NI + + +K++DFGLA E+ E T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 235 EIM 237
EI+
Sbjct: 188 EIV 190
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
DIG L F ++ + +G++ A K I +R + V + RE+ +L+ +
Sbjct: 15 DIGEELGSGQFAIV-KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L DV+ + T +V ++ L+ G +L + L + + LS++ + QIL G
Sbjct: 74 HHNVITLHDVYENRT------DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 181 LKYIHSAGIIHRDLKPSNIAVNEDC----ELKILDFGLARPTEN--EMTGYVATRWYRAP 234
+ Y+H+ I H DLKP NI + + +K++DFGLA E+ E T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 235 EIM 237
EI+
Sbjct: 188 EIV 190
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADL-NNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV M G D+ +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYMPGGDMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 100/180 (55%), Gaps = 17/180 (9%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLL 130
L + + +F A++ + KV +K I +P V + RE+++L+++ N+I L
Sbjct: 45 LGRGKYSEVFE-AINITNNEKVVVK-ILKP----VKKNKIKREIKILENLRGGPNIITLA 98
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGII 190
D+ + H+ D + +T L+D ++F +Y+IL+ L Y HS GI+
Sbjct: 99 DIVKDPVSRTP---ALVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 191 HRDLKPSNIAVN-EDCELKILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQT 246
HRD+KP N+ ++ E +L+++D+GLA P + E VA+R+++ PE+++++ Y+ +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYS 212
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 36/171 (21%)
Query: 253 QDLKPSNIAVN-EDCELKILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQT- 307
+D+KP N+ ++ E +L+++D+GLA P + E VA+R+++ PE+++++ Y+ +
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 308 ------------------------DIHQLNLIMEMLGTPPA-EFMAKISSDSARKYINSL 342
+ QL I ++LGT +++ K + + ++ + L
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL 273
Query: 343 PLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
++K + + N P+A+ R+TA +A+ HPY
Sbjct: 274 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADL-NNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV M G D+ +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYMPGGDMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 19/188 (10%)
Query: 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTY--RELR 116
+E R + D L +F + A D + VAIK IA+ A+ K E+
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVIL-AEDKRTQKLVAIKCIAK---EALEGKEGSMENEIA 68
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLV 174
+L + H N++ L D++ S ++Y++ L+ G + I+ ++ L+
Sbjct: 69 VLHKIKHPNIVALDDIYESGG------HLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATR 229
+Q+L +KY+H GI+HRDLKP N+ +++ED ++ I DFGL++ + + ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 230 WYRAPEIM 237
Y APE++
Sbjct: 183 GYVAPEVL 190
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 31/153 (20%)
Query: 253 QDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP N+ +++ED ++ I DFGL++ + + ++ T Y APE++ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 308 DIHQLNLIMEML--GTPP---------AEFMAKISSDSARKYINSLPLLTKKDFRQVFKG 356
D + +I +L G PP E + K + Y + + + KDF +
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS-DSAKDFIRHLME 258
Query: 357 ANPQAIXXXXXXXXXXXXKRITAEQALAHPYLS 389
+P+ KR T EQAL HP+++
Sbjct: 259 KDPE--------------KRFTCEQALQHPWIA 277
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 13/133 (9%)
Query: 112 YRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADL-NNILRTQKLSDDH 169
Y E+ +LK ++H N+I L DVF D K Y+VT G +L I+ K +
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFE------DKKYFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 170 VQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLAR--PTENEMTG 224
++ QIL G+ Y+H I+HRD+KP NI + N +KI+DFGL+ + ++
Sbjct: 148 AANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 225 YVATRWYRAPEIM 237
+ T +Y APE++
Sbjct: 208 RLGTAYYIAPEVL 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 19/188 (10%)
Query: 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTY--RELR 116
+E R + D L +F + A D + VAIK IA+ A+ K E+
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVIL-AEDKRTQKLVAIKCIAK---KALEGKEGSMENEIA 68
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLV 174
+L + H N++ L D++ S ++Y++ L+ G + I+ ++ L+
Sbjct: 69 VLHKIKHPNIVALDDIYESGG------HLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATR 229
+Q+L +KY+H GI+HRDLKP N+ +++ED ++ I DFGL++ + + ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 230 WYRAPEIM 237
Y APE++
Sbjct: 183 GYVAPEVL 190
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 31/153 (20%)
Query: 253 QDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP N+ +++ED ++ I DFGL++ + + ++ T Y APE++ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 308 DIHQLNLIMEML--GTPP---------AEFMAKISSDSARKYINSLPLLTKKDFRQVFKG 356
D + +I +L G PP E + K + Y + + + KDF +
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS-DSAKDFIRHLME 258
Query: 357 ANPQAIXXXXXXXXXXXXKRITAEQALAHPYLS 389
+P+ KR T EQAL HP+++
Sbjct: 259 KDPE--------------KRFTCEQALQHPWIA 277
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 19/188 (10%)
Query: 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTY--RELR 116
+E R + D L +F + A D + VAIK IA+ A+ K E+
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVIL-AEDKRTQKLVAIKCIAK---EALEGKEGSMENEIA 68
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLV 174
+L + H N++ L D++ S ++Y++ L+ G + I+ ++ L+
Sbjct: 69 VLHKIKHPNIVALDDIYESGG------HLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATR 229
+Q+L +KY+H GI+HRDLKP N+ +++ED ++ I DFGL++ + + ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 230 WYRAPEIM 237
Y APE++
Sbjct: 183 GYVAPEVL 190
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 31/153 (20%)
Query: 253 QDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP N+ +++ED ++ I DFGL++ + + ++ T Y APE++ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 308 DIHQLNLIMEML--GTPP---------AEFMAKISSDSARKYINSLPLLTKKDFRQVFKG 356
D + +I +L G PP E + K + Y + + + KDF +
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS-DSAKDFIRHLME 258
Query: 357 ANPQAIXXXXXXXXXXXXKRITAEQALAHPYLS 389
+P+ KR T EQAL HP+++
Sbjct: 259 KDPE--------------KRFTCEQALQHPWIA 277
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 18/180 (10%)
Query: 68 IGP-----TLSKESFDLIFSSALDSVSGVKVAIKKIARPF--QSAVHAKRTYRELRMLKH 120
IGP TL + SF + A + KVA+K I+R +S +H R RE+ LK
Sbjct: 8 IGPYIIRETLGEGSFGKV-KLATHYKTQQKVALKFISRQLLKKSDMHM-RVEREISYLKL 65
Query: 121 MNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILR 179
+ H ++I L DV + T ++ MV G +L + I+ +++++D + QI+
Sbjct: 66 LRHPHIIKLYDVITTPT------DIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIIC 119
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIM 237
++Y H I+HRDLKP N+ ++++ +KI DFGL+ N + + Y APE++
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 179
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 19/188 (10%)
Query: 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTY--RELR 116
+E R + D L +F + A D + VAIK IA+ A+ K E+
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVIL-AEDKRTQKLVAIKCIAK---EALEGKEGSMENEIA 68
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLV 174
+L + H N++ L D++ S ++Y++ L+ G + I+ ++ L+
Sbjct: 69 VLHKIKHPNIVALDDIYESGG------HLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATR 229
+Q+L +KY+H GI+HRDLKP N+ +++ED ++ I DFGL++ + + ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 230 WYRAPEIM 237
Y APE++
Sbjct: 183 GYVAPEVL 190
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 31/153 (20%)
Query: 253 QDLKPSNI---AVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP N+ +++ED ++ I DFGL++ + + ++ T Y APE++ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 308 DIHQLNLIMEML--GTPP---------AEFMAKISSDSARKYINSLPLLTKKDFRQVFKG 356
D + +I +L G PP E + K + Y + + + KDF +
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS-DSAKDFIRHLME 258
Query: 357 ANPQAIXXXXXXXXXXXXKRITAEQALAHPYLS 389
+P+ KR T EQAL HP+++
Sbjct: 259 KDPE--------------KRFTCEQALQHPWIA 277
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 18/184 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSV-SGVKVAIKKI-ARPFQSAVHAKRTYRELRMLKHMNHEN 125
+G L K SF ++ + +S+ +G++VAIK I + A +R E+++ + H +
Sbjct: 15 VGNLLGKGSFAGVYRA--ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL--RTQKLSDDHVQFLVYQILRGLK 182
++ L + F D VY+V + ++N L R + S++ + ++QI+ G+
Sbjct: 73 ILELYNYF------EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR----PTENEMTGYVATRWYRAPEIML 238
Y+HS GI+HRDL SN+ + + +KI DFGLA P E T T Y +PEI
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIAT 185
Query: 239 NWMH 242
H
Sbjct: 186 RSAH 189
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 43/176 (24%)
Query: 239 NWMHYNQTGVPFYF------QDLKPSNIAVNEDCELKILDFGLAR----PTENEMTGYVA 288
++MH TG+ + +DL SN+ + + +KI DFGLA P E T
Sbjct: 116 HFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCG 174
Query: 289 TRWYRAPEIMLNWMHYNQTDIHQLNLIME--MLGTPPAEFMAKISSDSARKYINSLPL-- 344
T Y +PEI H ++D+ L + ++G PP +D+ + +N + L
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP------FDTDTVKNTLNKVVLAD 228
Query: 345 --------LTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
+ KD NP R++ L HP++S+ S
Sbjct: 229 YEMPSFLSIEAKDLIHQLLRRNP--------------ADRLSLSSVLDHPFMSRNS 270
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 17/131 (12%)
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLV 174
+L++ H N+I L DV+ D K VY+VT LM G L+ ILR + S+ ++
Sbjct: 69 LLRYGQHPNIITLKDVYD------DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL 122
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDC----ELKILDFGLARPTENEMTGYVATRW 230
+ I + ++Y+H+ G++HRDLKPSNI ++ ++I DFG A+ E G + T
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE-NGLLMTPC 181
Query: 231 YR----APEIM 237
Y APE++
Sbjct: 182 YTANFVAPEVL 192
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
DIG L F ++ + +G++ A K I +R + V + RE+ +L+ +
Sbjct: 15 DIGEELGSGQFAIV-KKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H N+I L DV+ + T +V ++ L+ G +L + L + + LS++ + QIL G
Sbjct: 74 HPNIITLHDVYENRT------DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 181 LKYIHSAGIIHRDLKPSNIAVNEDC----ELKILDFGLARPTEN--EMTGYVATRWYRAP 234
+ Y+H+ I H DLKP NI + + +K++DFGLA E+ E T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 235 EIM 237
EI+
Sbjct: 188 EIV 190
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYAPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFGLA+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFGLA+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAK-RTYRELRMLKHMN 122
G I TL + SF + A + +G KVA+K I + + + R RE+ L+ +
Sbjct: 4 GNYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILRGL 181
H ++I L DV S + MV G +L + I++ K+S+ + QI+ +
Sbjct: 63 HPHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 116
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIM 237
+Y H I+HRDLKP N+ ++E +KI DFGL+ N + + Y APE++
Sbjct: 117 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 174
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 199 IAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPS 258
I V E ++ D+ + R ++M+ A R+++ + + H ++ +DLKP
Sbjct: 80 IMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHK----IVHRDLKPE 132
Query: 259 NIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIM 298
N+ ++E +KI DFGL+ N + + Y APE++
Sbjct: 133 NLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 174
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAK-RTYRELRMLKHMN 122
G I TL + SF + A + +G KVA+K I + + + R RE+ L+ +
Sbjct: 13 GNYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILRGL 181
H ++I L DV S + MV G +L + I++ K+S+ + QI+ +
Sbjct: 72 HPHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 125
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIM 237
+Y H I+HRDLKP N+ ++E +KI DFGL+ N + + Y APE++
Sbjct: 126 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 183
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR-- 277
++M+ A R+++ + + H ++ +DLKP N+ ++E +KI DFGL+
Sbjct: 107 DKMSEQEARRFFQQIISAVEYCHRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIM 162
Query: 278 PTENEMTGYVATRWYRAPEIM 298
N + + Y APE++
Sbjct: 163 TDGNFLKTSCGSPNYAAPEVI 183
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAK-RTYRELRMLKHMN 122
G I TL + SF + A + +G KVA+K I + + + R RE+ L+ +
Sbjct: 8 GNYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILRGL 181
H ++I L DV S + MV G +L + I++ K+S+ + QI+ +
Sbjct: 67 HPHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 120
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIM 237
+Y H I+HRDLKP N+ ++E +KI DFGL+ N + + Y APE++
Sbjct: 121 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 178
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 195 KPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQD 254
K I V E ++ D+ + R ++M+ A R+++ + + H ++ +D
Sbjct: 80 KDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHK----IVHRD 132
Query: 255 LKPSNIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIM 298
LKP N+ ++E +KI DFGL+ N + + Y APE++
Sbjct: 133 LKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 178
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAK-RTYRELRMLKHMN 122
G I TL + SF + A + +G KVA+K I + + + R RE+ L+ +
Sbjct: 14 GNYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILRGL 181
H ++I L DV S + MV G +L + I++ K+S+ + QI+ +
Sbjct: 73 HPHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 126
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEIM 237
+Y H I+HRDLKP N+ ++E +KI DFGL+ N + + Y APE++
Sbjct: 127 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 184
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR-- 277
++M+ A R+++ + + H ++ +DLKP N+ ++E +KI DFGL+
Sbjct: 108 DKMSEQEARRFFQQIISAVEYCHRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIM 163
Query: 278 PTENEMTGYVATRWYRAPEIM 298
N + + Y APE++
Sbjct: 164 TDGNFLKTSCGSPNYAAPEVI 184
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 89 SGVKVAIKKIARPFQSAVHAKR---TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145
SG A+K + + Q V K+ T E R+L+ +N ++ L F N+ N+
Sbjct: 52 SGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS------NL 103
Query: 146 YMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE 203
YMV + G +++ R + S+ H +F QI+ +Y+HS +I+RDLKP N+ ++E
Sbjct: 104 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDE 163
Query: 204 DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 239
+++ DFG A+ + T Y APEI+L+
Sbjct: 164 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 199
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ ++E +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 210
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 211 LGVLIYEMAAGYPP 224
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 33 SGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 86
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ ++ + + + +++GL Y+ I+HRD+KPSNI VN E
Sbjct: 87 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 146
Query: 207 LKILDFGLARPTENEMTG-YVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ +EM +V TR Y +PE L HY+
Sbjct: 147 IKLCDFGVSGQLIDEMANEFVGTRSYMSPE-RLQGTHYS 184
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTG-YVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ +EM +V TR Y +PE L HY+ Q+DI
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPE-RLQGTHYSVQSDIW 190
Query: 311 QLNL-IMEM-LGTPPAEFMA 328
+ L ++EM +G P MA
Sbjct: 191 SMGLSLVEMAVGRYPRPPMA 210
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV G +++ R + S+
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYAPGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
++G +VA+K I + ++ ++ +RE+R++K +NH N++ L +V + K +Y+
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE------KTLYL 90
Query: 148 VTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
V G + ++ ++ + + QI+ ++Y H I+HRDLK N+ ++ D
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 150
Query: 206 ELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+KI DFG + N++ + Y APE+
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF 184
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYN--QTD 308
+DLK N+ ++ D +KI DFG + N++ + Y APE + Y+ + D
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE-LFQGKKYDGPEVD 195
Query: 309 IHQLNLIMEML 319
+ L +I+ L
Sbjct: 196 VWSLGVILYTL 206
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYAPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
++G +VA+K I + ++ ++ +RE+R++K +NH N++ L +V + K +Y+
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE------KTLYL 90
Query: 148 VTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
V G + ++ ++ + + QI+ ++Y H I+HRDLK N+ ++ D
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 150
Query: 206 ELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+KI DFG + N++ + + Y APE+
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLK N+ ++ D +KI DFG + N++ + + Y APE+ + + D+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 310 HQLNLIMEML 319
L +I+ L
Sbjct: 197 WSLGVILYTL 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
++G +VA+K I + ++ ++ +RE+R++K +NH N++ L +V + K +Y+
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE------KTLYL 90
Query: 148 VTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
V G + ++ ++ + + QI+ ++Y H I+HRDLK N+ ++ D
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 150
Query: 206 ELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+KI DFG + N++ + + Y APE+
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLK N+ ++ D +KI DFG + N++ + + Y APE+ + + D+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 310 HQLNLIMEML 319
L +I+ L
Sbjct: 197 WSLGVILYTL 206
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYAPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFGLA+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFGLA+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLV 174
+L++ H N+I L DV+ D K VY+VT L G L+ ILR + S+ ++
Sbjct: 69 LLRYGQHPNIITLKDVYD------DGKYVYVVTELXKGGELLDKILRQKFFSEREASAVL 122
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDC----ELKILDFGLARPTENEMTGYVATRW 230
+ I + ++Y+H+ G++HRDLKPSNI ++ ++I DFG A+ E G + T
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE-NGLLXTPC 181
Query: 231 YR----APEIM 237
Y APE++
Sbjct: 182 YTANFVAPEVL 192
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
T+ K +F + A ++G +VA+K I + + ++ +RE+R++K +NH N++ L
Sbjct: 22 TIGKGNFAKV-KLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 131 DVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAG 188
+V + K +Y+V G + ++ ++ + + QI+ ++Y H
Sbjct: 81 EVIETE------KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 189 IIHRDLKPSNIAVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIM 237
I+HRDLK N+ ++ D +KI DFG + N++ + + Y APE+
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELF 185
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLK N+ ++ D +KI DFG + N++ + + Y APE+ + + D+
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 197
Query: 310 HQLNLIMEML 319
L +I+ L
Sbjct: 198 WSLGVILYTL 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 92 SGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 145
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ ++ + + + +++GL Y+ I+HRD+KPSNI VN E
Sbjct: 146 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 205
Query: 207 LKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ + M +V TR Y +PE L HY+
Sbjct: 206 IKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 243
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ + M +V TR Y +PE L HY+ Q+DI
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 249
Query: 311 QLNL-IMEM 318
+ L ++EM
Sbjct: 250 SMGLSLVEM 258
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
R+Y A +I+L + + + + ++DLKP N+ +++ +++ DFG A+ +
Sbjct: 143 ARFY-AAQIVLTFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC 199
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLN-LIMEM-LGTPP 323
T Y APEI+L+ + D L LI EM G PP
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LNLIMEML--GTPP 323
L +++ + G PP
Sbjct: 224 LGVLIYQMAAGYPP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEYSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEYSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEYSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 81 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 134
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 194
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 195 PEYLAPEIILS 205
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 217 LGVLIYEMAAGYPP 230
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 74 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 127
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 128 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT 187
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 188 PEYLAPEIILS 198
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA 209
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 210 LGVLIYEMAAGYPP 223
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 109 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 162
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 222
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 223 PEYLAPEIILS 233
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 245 LGVLIYEMAAGYPP 258
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 21/189 (11%)
Query: 59 SEICRGVIDIGPTLSKESFD---LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYREL 115
+E + + + TL +F L A + VK KK + +S++ E+
Sbjct: 17 AEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE-----NEI 71
Query: 116 RMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADL-NNILRTQKLSDDHVQFL 173
+L+ + HEN++ L D++ S ++Y+V L+ G +L + I+ ++ L
Sbjct: 72 AVLRKIKHENIVALEDIYESPN------HLYLVMQLVSGGELFDRIVEKGFYTEKDASTL 125
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLAR--PTENEMTGYVAT 228
+ Q+L + Y+H GI+HRDLKP N+ + +E+ ++ I DFGL++ + M+ T
Sbjct: 126 IRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGT 185
Query: 229 RWYRAPEIM 237
Y APE++
Sbjct: 186 PGYVAPEVL 194
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 30 SGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 83
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ ++ + + + +++GL Y+ I+HRD+KPSNI VN E
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 207 LKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ + M +V TR Y +PE L HY+
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 181
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ + M +V TR Y +PE L HY+ Q+DI
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 311 QLNL-IMEM 318
+ L ++EM
Sbjct: 188 SMGLSLVEM 196
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 109 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 162
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGT 222
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 223 PEYLAPEIILS 233
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
R+Y A +I+L + + + + ++DLKP N+ +++ +++ DFG A+ +
Sbjct: 164 ARFY-AAQIVLTFEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC 220
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLN-LIMEM-LGTPP 323
T Y APEI+L+ + D L LI EM G PP
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 209 ILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDC 266
++D+GLA E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY---------------------DY 211
Query: 267 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-AE 325
L + G +A+ +R +Y+ QL I ++LGT +
Sbjct: 212 SLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLYD 256
Query: 326 FMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAE 380
++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 381 QALAHPYL 388
+A+ HPY
Sbjct: 317 EAMEHPYF 324
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
++G +VA++ I + ++ ++ +RE+R++K +NH N++ L +V + K +Y+
Sbjct: 37 LTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE------KTLYL 90
Query: 148 VTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
V G + ++ ++ + + QI+ ++Y H I+HRDLK N+ ++ D
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 150
Query: 206 ELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+KI DFG + N++ + + Y APE+
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLK N+ ++ D +KI DFG + N++ + + Y APE+ + + D+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 310 HQLNLIMEML 319
L +I+ L
Sbjct: 197 WSLGVILYTL 206
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 209 ILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDC 266
++D+GLA E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY---------------------DY 211
Query: 267 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-AE 325
L + G +A+ +R +Y+ QL I ++LGT +
Sbjct: 212 SLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLYD 256
Query: 326 FMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAE 380
++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 381 QALAHPYL 388
+A+ HPY
Sbjct: 317 EAMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 209 ILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDC 266
++D+GLA E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY---------------------DY 211
Query: 267 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-AE 325
L + G +A+ +R +Y+ QL I ++LGT +
Sbjct: 212 SLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLYD 256
Query: 326 FMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAE 380
++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 381 QALAHPYL 388
+A+ HPY
Sbjct: 317 EAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 209 ILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDC 266
++D+GLA E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY---------------------DY 211
Query: 267 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-AE 325
L + G +A+ +R +Y+ QL I ++LGT +
Sbjct: 212 SLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLYD 256
Query: 326 FMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAE 380
++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 381 QALAHPYL 388
+A+ HPY
Sbjct: 317 EAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 49/249 (19%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 114 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 171
Query: 209 ILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNED 265
++D+GLA P + E VA+R+++ PE+++++ Y D
Sbjct: 172 LIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMY---------------------D 209
Query: 266 CELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-A 324
L + G +A+ +R +Y+ QL I ++LGT
Sbjct: 210 YSLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLY 254
Query: 325 EFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITA 379
+++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314
Query: 380 EQALAHPYL 388
+A+ HPY
Sbjct: 315 REAMEHPYF 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 49/249 (19%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 209 ILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNED 265
++D+GLA P + E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMY---------------------D 210
Query: 266 CELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-A 324
L + G +A+ +R +Y+ QL I ++LGT
Sbjct: 211 YSLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLY 255
Query: 325 EFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITA 379
+++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 380 EQALAHPYL 388
+A+ HPY
Sbjct: 316 REAMEHPYF 324
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
++G +VA++ I + ++ ++ +RE+R++K +NH N++ L +V + K +Y+
Sbjct: 37 LTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE------KTLYL 90
Query: 148 VTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
V G + ++ ++ + + QI+ ++Y H I+HRDLK N+ ++ D
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 150
Query: 206 ELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+KI DFG + N++ + + Y APE+
Sbjct: 151 NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELF 184
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLK N+ ++ D +KI DFG + N++ + + Y APE+ + + D+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 310 HQLNLIMEML 319
L +I+ L
Sbjct: 197 WSLGVILYTL 206
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 30 SGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 83
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ ++ + + + +++GL Y+ I+HRD+KPSNI VN E
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 207 LKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ + M +V TR Y +PE L HY+
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 181
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ + M +V TR Y +PE L HY+ Q+DI
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 311 QLNL-IMEM 318
+ L ++EM
Sbjct: 188 SMGLSLVEM 196
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 57 SGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 110
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ ++ + + + +++GL Y+ I+HRD+KPSNI VN E
Sbjct: 111 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 170
Query: 207 LKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ + M +V TR Y +PE L HY+
Sbjct: 171 IKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 208
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ + M +V TR Y +PE L HY+ Q+DI
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 214
Query: 311 QLNL-IMEM 318
+ L ++EM
Sbjct: 215 SMGLSLVEM 223
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 114 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 171
Query: 209 ILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDC 266
++D+GLA E VA+R+++ PE+++++ Y D
Sbjct: 172 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY---------------------DY 210
Query: 267 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-AE 325
L + G +A+ +R +Y+ QL I ++LGT +
Sbjct: 211 SLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLYD 255
Query: 326 FMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAE 380
++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 381 QALAHPYL 388
+A+ HPY
Sbjct: 316 EAMEHPYF 323
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 13/166 (7%)
Query: 90 GVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149
G + IK+I S+ + + RE+ +L +M H N++ + F N L Y+V
Sbjct: 49 GRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSL------YIVM 102
Query: 150 -HLMGADLNNILRTQK---LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
+ G DL + QK +D + QI LK++H I+HRD+K NI + +D
Sbjct: 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG 162
Query: 206 ELKILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
+++ DFG+AR T + T +Y +PEI N + N++ +
Sbjct: 163 TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDI 208
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K NI + +D +++ DFG+AR T + T +Y +PEI N + N++DI
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDI 208
Query: 310 HQLNLIMEMLGTPPAEFMA 328
L ++ L T F A
Sbjct: 209 WALGCVLYELCTLKHAFEA 227
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 113 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 170
Query: 209 ILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDC 266
++D+GLA E VA+R+++ PE+++++ Y D
Sbjct: 171 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY---------------------DY 209
Query: 267 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-AE 325
L + G +A+ +R +Y+ QL I ++LGT +
Sbjct: 210 SLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLYD 254
Query: 326 FMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAE 380
++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 255 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 314
Query: 381 QALAHPYL 388
+A+ HPY
Sbjct: 315 EAMEHPYF 322
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 49/249 (19%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 209 ILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNED 265
++D+GLA P + E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMY---------------------D 210
Query: 266 CELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-A 324
L + G +A+ +R +Y+ QL I ++LGT
Sbjct: 211 YSLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLY 255
Query: 325 EFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITA 379
+++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 380 EQALAHPYL 388
+A+ HPY
Sbjct: 316 REAMEHPYF 324
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 30 SGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 83
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ ++ + + + +++GL Y+ I+HRD+KPSNI VN E
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 207 LKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ + M +V TR Y +PE L HY+
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 181
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ + M +V TR Y +PE L HY+ Q+DI
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 311 QLNL-IMEM 318
+ L ++EM
Sbjct: 188 SMGLSLVEM 196
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 209 ILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDC 266
++D+GLA E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY---------------------DY 211
Query: 267 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-AE 325
L + G +A+ +R +Y+ QL I ++LGT +
Sbjct: 212 SLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLYD 256
Query: 326 FMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAE 380
++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 381 QALAHPYL 388
+A+ HPY
Sbjct: 317 EAMEHPYF 324
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYAPGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 49/261 (18%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 209 ILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNED 265
++D+GLA P + E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMY---------------------D 210
Query: 266 CELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPA- 324
L + G +A+ +R +Y+ QL I ++LGT
Sbjct: 211 YSLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLY 255
Query: 325 EFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITA 379
+++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 380 EQALAHPYLSQYSDPNDEPTS 400
+A+ HPY +P +
Sbjct: 316 REAMEHPYFYPVVKEQSQPCA 336
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG A+K + + RT E +L +NH V+ L F + L ++
Sbjct: 55 SGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKL-----YLIL 109
Query: 149 THLMGADLNNILRTQKL-SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
L G DL L + + +++ V+F + ++ GL ++HS GII+RDLKP NI ++E+ +
Sbjct: 110 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHI 169
Query: 208 KILDFGLARPT---ENEMTGYVATRWYRAPEIM 237
K+ DFGL++ E + + T Y APE++
Sbjct: 170 KLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE ++ Y+A E+ L H + G+ ++DLKP NI ++E+ +K+ DFGL++
Sbjct: 128 TEEDVKFYLA-------ELALGLDHLHSLGI--IYRDLKPENILLDEEGHIKLTDFGLSK 178
Query: 278 PT---ENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
E + + T Y APE++ H + D ++M EML G+ P
Sbjct: 179 EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N + L F N+ N+YMV G +++ R + S+
Sbjct: 89 TLNEKRILQAVNFPFLTKLEFSFKDNS------NLYMVMEYAPGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 49/249 (19%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 120 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 177
Query: 209 ILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNED 265
++D+GLA P + E VA+R+++ PE+++++ Y D
Sbjct: 178 LIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMY---------------------D 215
Query: 266 CELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-A 324
L + G +A+ +R +Y+ QL I ++LGT
Sbjct: 216 YSLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLY 260
Query: 325 EFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITA 379
+++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 261 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 320
Query: 380 EQALAHPYL 388
+A+ HPY
Sbjct: 321 REAMEHPYF 329
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 30 SGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 83
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ ++ + + + +++GL Y+ I+HRD+KPSNI VN E
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 207 LKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ + M +V TR Y +PE L HY+
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 181
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ + M +V TR Y +PE L HY+ Q+DI
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 311 QLNL-IMEM 318
+ L ++EM
Sbjct: 188 SMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 30 SGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 83
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ ++ + + + +++GL Y+ I+HRD+KPSNI VN E
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 207 LKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ + M +V TR Y +PE L HY+
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 181
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ + M +V TR Y +PE L HY+ Q+DI
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 311 QLNL-IMEM 318
+ L ++EM
Sbjct: 188 SMGLSLVEM 196
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+++
Sbjct: 202 PEYLAPEIIIS 212
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
R+Y A +I+L + + + + ++DLKP N+ +++ +++ DFG A+ +
Sbjct: 143 ARFY-AAQIVLTFEYLH--SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC 199
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLN-LIMEM-LGTPP 323
T Y APEI+++ + D L LI EM G PP
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N + L F N+ N+YMV G +++ R + S+
Sbjct: 89 TLNEKRILQAVNFPFLTKLEFSFKDNS------NLYMVMEYAPGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 49/249 (19%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + +T L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLR 172
Query: 209 ILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNED 265
++D+GLA P + E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMY---------------------D 210
Query: 266 CELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPA- 324
L + G +A+ +R +Y+ QL I ++LGT
Sbjct: 211 YSLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLY 255
Query: 325 EFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITA 379
+++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 380 EQALAHPYL 388
+A+ HPY
Sbjct: 316 REAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 49/249 (19%)
Query: 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELK 208
H+ D + Q L+D ++F +Y+IL+ L Y HS GI+HRD+KP N+ ++ E +L+
Sbjct: 115 HVNNTDFKQL--RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 209 ILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNED 265
++D+GLA P + E VA+R+++ PE+++++ Y D
Sbjct: 173 LIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDYQMY---------------------D 210
Query: 266 CELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP-A 324
L + G +A+ +R +Y+ QL I ++LGT
Sbjct: 211 YSLDMWSLGCM----------LASMIFRKEPFFHGHDNYD-----QLVRIAKVLGTEDLY 255
Query: 325 EFMAKISSDSARKYINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITA 379
+++ K + + ++ + L ++K + + N P+A+ R+TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 380 EQALAHPYL 388
+A+ HPY
Sbjct: 316 REAMEHPYF 324
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 103 QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL- 160
+ V + RE+ +L+ + H N+I L D+F + T +V ++ L+ G +L + L
Sbjct: 54 RRGVSREEIEREVNILREIRHPNIITLHDIFENKT------DVVLILELVSGGELFDFLA 107
Query: 161 RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLAR 216
+ L++D + QIL G+ Y+HS I H DLKP NI + + + +K++DFG+A
Sbjct: 108 EKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 167
Query: 217 PTE--NEMTGYVATRWYRAPEIM 237
E NE T + APEI+
Sbjct: 168 KIEAGNEFKNIFGTPEFVAPEIV 190
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 13 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 72 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 235 EIM 237
EI+
Sbjct: 186 EIV 188
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 13 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 72 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 235 EIM 237
EI+
Sbjct: 186 EIV 188
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELKILDFGLAR---PT 218
Q L+D ++F +Y++L+ L Y HS GI+HRD+KP N+ ++ + +L+++D+GLA P
Sbjct: 127 QILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPA 186
Query: 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP 278
+ E VA+R+++ PE+++++ Y D L + G
Sbjct: 187 Q-EYNVRVASRYFKGPELLVDYQMY---------------------DYSLDMWSLGC--- 221
Query: 279 TENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPA-EFMAKISSDSARK 337
M + R R P + Q + QL I ++LGT ++ K D
Sbjct: 222 ----MLASMIFR--REP------FFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPH 269
Query: 338 YINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
+ + L ++K + N P+A+ +R+TA++A+ HPY
Sbjct: 270 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVV 329
Query: 393 DPNDEPTS 400
+P++
Sbjct: 330 KEQSQPSA 337
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 103 QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL- 160
+ V + RE+ +L+ + H N+I L D+F + T +V ++ L+ G +L + L
Sbjct: 68 RRGVSREEIEREVNILREIRHPNIITLHDIFENKT------DVVLILELVSGGELFDFLA 121
Query: 161 RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLAR 216
+ L++D + QIL G+ Y+HS I H DLKP NI + + + +K++DFG+A
Sbjct: 122 EKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 181
Query: 217 PTE--NEMTGYVATRWYRAPEIM 237
E NE T + APEI+
Sbjct: 182 KIEAGNEFKNIFGTPEFVAPEIV 204
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGKFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + ++
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFAEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM- 147
+G+ VAIKK+ Q R + ++ L ++H N++ L F++ D +++Y+
Sbjct: 47 TGMSVAIKKV---IQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYT-LGERDRRDIYLN 102
Query: 148 -----VTHLMGADLNNILRTQKLSDD-HVQFLVYQILRGLKYIH--SAGIIHRDLKPSNI 199
V + N R Q ++ ++Q++R + +H S + HRD+KP N+
Sbjct: 103 VVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNV 162
Query: 200 AVNE-DCELKILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHY 243
VNE D LK+ DFG A+ P+E + Y+ +R+YRAPE++ HY
Sbjct: 163 LVNEADGTLKLCDFGSAKKLSPSEPNV-AYICSRYYRAPELIFGNQHY 209
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 253 QDLKPSNIAVNE-DCELKILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHY-NQT 307
+D+KP N+ VNE D LK+ DFG A+ P+E + Y+ +R+YRAPE++ HY
Sbjct: 155 RDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV-AYICSRYYRAPELIFGNQHYTTAV 213
Query: 308 DI-----------------------HQLNLIMEMLGTPPAEFMAKIS-SDSARKYINSLP 343
DI QL+ I+ +LG P E + K++ S + NS
Sbjct: 214 DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG 273
Query: 344 LLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+ F +A +R+ +AL HPY + DP
Sbjct: 274 IPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDP 324
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 103 QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL- 160
+ V + RE+ +L+ + H N+I L D+F + T +V ++ L+ G +L + L
Sbjct: 47 RRGVSREEIEREVNILREIRHPNIITLHDIFENKT------DVVLILELVSGGELFDFLA 100
Query: 161 RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLAR 216
+ L++D + QIL G+ Y+HS I H DLKP NI + + + +K++DFG+A
Sbjct: 101 EKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160
Query: 217 PTE--NEMTGYVATRWYRAPEIM 237
E NE T + APEI+
Sbjct: 161 KIEAGNEFKNIFGTPEFVAPEIV 183
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV G +++ R + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYAPGGEMFSHLRRIGRFXEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG+ +A K I + A+ + REL++L N ++G F+S+ ++ +
Sbjct: 49 SGLVMARKLIHLEIKPAIR-NQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICM 102
Query: 149 THLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCE 206
H+ G L+ +L+ ++ + + + +++GL Y+ I+HRD+KPSNI VN E
Sbjct: 103 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 162
Query: 207 LKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN 244
+K+ DFG++ + M +V TR Y +PE L HY+
Sbjct: 163 IKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 200
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYN-QTDIH 310
+D+KPSNI VN E+K+ DFG++ + M +V TR Y +PE L HY+ Q+DI
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 206
Query: 311 QLNL-IMEM 318
+ L ++EM
Sbjct: 207 SMGLSLVEM 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
++G +VA+K I + ++ ++ +RE+R++K +NH N++ L +V + K +Y+
Sbjct: 30 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE------KTLYL 83
Query: 148 VT-HLMGADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
V + G ++ + L + + + QI+ ++Y H I+HRDLK N+ ++ D
Sbjct: 84 VMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 143
Query: 206 ELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+KI DFG + N++ + + Y APE+
Sbjct: 144 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 177
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLK N+ ++ D +KI DFG + N++ + + Y APE+ + + D+
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 189
Query: 310 HQLNLIMEML 319
L +I+ L
Sbjct: 190 WSLGVILYTL 199
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
++G +VAIK I + + ++ +RE+R++K +NH N++ L +V + K +Y+
Sbjct: 38 LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE------KTLYL 91
Query: 148 VTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
+ G + ++ ++ + + QI+ ++Y H I+HRDLK N+ ++ D
Sbjct: 92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM 151
Query: 206 ELKILDFGLARP--TENEMTGYVATRWYRAPEIM 237
+KI DFG + ++ + Y APE+
Sbjct: 152 NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELF 185
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYN--QTD 308
+DLK N+ ++ D +KI DFG + ++ + Y APE + Y+ + D
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE-LFQGKKYDGPEVD 196
Query: 309 IHQLNLIMEML 319
+ L +I+ L
Sbjct: 197 VWSLGVILYTL 207
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
++G +VA+K I + ++ ++ +RE+R+ K +NH N++ L +V + K +Y+
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETE------KTLYL 90
Query: 148 VTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
V G + ++ + + + QI+ ++Y H I+HRDLK N+ ++ D
Sbjct: 91 VXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADX 150
Query: 206 ELKILDFGLARPTE--NEMTGYVATRWYRAPEIM 237
+KI DFG + N++ + Y APE+
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF 184
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLK N+ ++ D +KI DFG + N++ + Y APE+ + + D+
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 310 HQLNLIMEML 319
L +I+ L
Sbjct: 197 WSLGVILYTL 206
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 92 KVAIKKIARPFQSAVHAKR----TYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVY 146
K KK + F + +KR T +E+ LK H N++ L +VFH D + +
Sbjct: 29 KCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFH------DQLHTF 82
Query: 147 MVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV--- 201
+V L+ G I + + S+ +++ +++ + ++H G++HRDLKP N+
Sbjct: 83 LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE 142
Query: 202 NEDCELKILDFGLAR--PTENE-MTGYVATRWYRAPEIMLNWMHYNQT 246
N++ E+KI+DFG AR P +N+ + T Y APE +LN Y+++
Sbjct: 143 NDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LLNQNGYDES 189
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 242 HYNQTGVPFYFQDLKPSNIAV---NEDCELKILDFGLAR--PTENE-MTGYVATRWYRAP 295
H + GV +DLKP N+ N++ E+KI+DFG AR P +N+ + T Y AP
Sbjct: 121 HMHDVGV--VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 296 EIMLNWMHYNQT-DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDF 350
E +LN Y+++ D+ L +I+ + + F + S + + + + K DF
Sbjct: 179 E-LLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF 233
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI----ARPFQSAVHAKRTYRELRMLKHMN 122
D G L F ++ + +G++ A K I + + V + RE+ +LK +
Sbjct: 14 DTGEELGSGVFAVV-KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRG 180
H NVI L +V+ + T +V ++ L+ G +L + L + L+++ + QIL G
Sbjct: 73 HPNVITLHEVYENKT------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLARPTE--NEMTGYVATRWYRAP 234
+ Y+HS I H DLKP NI + + +KI+DFGLA + NE T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 235 EIM 237
EI+
Sbjct: 187 EIV 189
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 79/153 (51%), Gaps = 10/153 (6%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
++G +VAIK I + + ++ +RE+R++K +NH N++ L +V + K +Y+
Sbjct: 35 LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE------KTLYL 88
Query: 148 VTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
+ G + ++ ++ + + QI+ ++Y H I+HRDLK N+ ++ D
Sbjct: 89 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM 148
Query: 206 ELKILDFGLARP--TENEMTGYVATRWYRAPEI 236
+KI DFG + ++ + + Y APE+
Sbjct: 149 NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPEL 181
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARP--TENEMTGYVATRWYRAPEIMLNWMHYN--QTD 308
+DLK N+ ++ D +KI DFG + ++ + + Y APE + Y+ + D
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPE-LFQGKKYDGPEVD 193
Query: 309 IHQLNLIMEML 319
+ L +I+ L
Sbjct: 194 VWSLGVILYTL 204
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I A + +G +VA+KK+ + + + E+ +++ +H+NV+ + +S+ +
Sbjct: 60 IVCIATEKHTGKQVAVKKMD--LRKQQRRELLFNEVVIMRDYHHDNVVDM----YSSYLV 113
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
D V M L G L +I+ +++++ + + +LR L Y+H+ G+IHRD+K +I
Sbjct: 114 GDELWVVM-EFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSI 172
Query: 200 AVNEDCELKILDFGLARPTENEM---TGYVATRWYRAPEIM 237
+ D +K+ DFG E+ V T ++ APE++
Sbjct: 173 LLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI 213
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRA 294
L+++H NQ + +D+K +I + D +K+ DFG E+ V T ++ A
Sbjct: 154 LSYLH-NQGVI---HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMA 209
Query: 295 PEIMLNWMHYNQTDIHQLN-LIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKK--DF 350
PE++ + + DI L +++EM+ G PP + + + R+ +SLP K
Sbjct: 210 PEVISRLPYGTEVDIWSLGIMVIEMIDGEPP--YFNEPPLQAMRRIRDSLPPRVKDLHKV 267
Query: 351 RQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
V +G +R TA++ L HP+L P+
Sbjct: 268 SSVLRG-------FLDLMLVREPSQRATAQELLGHPFLKLAGPPS 305
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELKILDFGLAR---PT 218
Q L+D ++F +Y++L+ L Y HS GI+HRD+KP N+ ++ + +L+++D+GLA P
Sbjct: 132 QILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPA 191
Query: 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP 278
+ E VA+R+++ PE+++++ Y D L + G
Sbjct: 192 Q-EYNVRVASRYFKGPELLVDYQMY---------------------DYSLDMWSLGCM-- 227
Query: 279 TENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPA-EFMAKISSDSARK 337
+A+ +R + Q + QL I ++LGT ++ K D
Sbjct: 228 --------LASMIFRREPFF-----HGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPH 274
Query: 338 YINSLPLLTKKDFRQVFKGAN-----PQAIXXXXXXXXXXXXKRITAEQALAHPYL 388
+ + L ++K + N P+A+ +R+TA++A+ HPY
Sbjct: 275 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 89 SGVKVAIKKIARPFQSAVHAKR---TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145
SG A+K + + Q V K+ T E R+L+ +N ++ L F N+ N+
Sbjct: 65 SGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS------NL 116
Query: 146 YMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE 203
YMV + G +++ R + + H +F QI+ +Y+HS +I+RDLKP N+ +++
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 176
Query: 204 DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 239
+++ DFG A+ + T Y APEI+L+
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
R+Y A +I+L + + + + ++DLKP N+ +++ +++ DFG A+ +
Sbjct: 143 ARFY-AAQIVLTFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC 199
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLN-LIMEM-LGTPP 323
T Y APEI+L+ + D L LI EM G PP
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFXEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+ + +N ++ L F N+ N+YMV G +++ R + S+
Sbjct: 89 TLNEKRIQQAVNFPFLVKLEFSFKDNS------NLYMVLEYAPGGEMFSHLRRIGRFSEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 89 SGVKVAIKKIARPFQSAVHAKR---TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145
SG A+K + + Q V K+ T E R+L+ +N ++ L F N+ N+
Sbjct: 60 SGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS------NL 111
Query: 146 YMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE 203
YMV + G +++ R + + H +F QI+ +Y+HS +I+RDLKP N+ +++
Sbjct: 112 YMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 171
Query: 204 DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 239
+++ DFG A+ + T Y APEI+L+
Sbjct: 172 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 207
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 218
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 219 LGVLIYEMAAGYPP 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFXEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + +
Sbjct: 109 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFXEP 162
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 222
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 223 PEYLAPEIILS 233
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
R+Y A +I+L + + + + ++DLKP N+ +++ +++ DFG A+ +
Sbjct: 164 ARFY-AAQIVLTFEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC 220
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLN-LIMEM-LGTPP 323
T Y APEI+L+ + D L LI EM G PP
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + +
Sbjct: 81 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFXEP 134
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 194
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 195 PEYLAPEIILS 205
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 217 LGVLIYEMAAGYPP 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + +
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFXEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFXEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVPGGEMFSHLRRIGRFXEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 202 PEYLAPEIILS 212
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +++ DFG A+ + T Y APEI+L+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126
D+ L K +F ++ + +G++ A K I SA ++ RE R+ + + H N+
Sbjct: 9 DVKEELGKGAFSVV-RRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYI 184
+ L D + F Y+V L+ G +I+ + S+ + QIL + Y
Sbjct: 68 VRLHDSIQEES----FH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 185 HSAGIIHRDLKPSNIAVNEDCE---LKILDFGLARPTENEMT--GYVATRWYRAPEIM 237
HS GI+HR+LKP N+ + + +K+ DFGLA + G+ T Y +PE++
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
Y AP I+L+
Sbjct: 202 PEYLAPAIILS 212
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
R+Y A +I+L + + + + ++DLKP N+ +++ +++ DFG A+ +
Sbjct: 143 ARFY-AAQIVLTFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC 199
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLN-LIMEM-LGTPP 323
T Y AP I+L+ + D L LI EM G PP
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126
D+ L K +F ++ + +G++ A K I SA ++ RE R+ + + H N+
Sbjct: 32 DVKEELGKGAFSVV-RRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLM-GADL-NNILRTQKLSDDHVQFLVYQILRGLKYI 184
+ L D + F Y+V L+ G +L +I+ + S+ + QIL + Y
Sbjct: 91 VRLHDSIQEES----FH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 185 HSAGIIHRDLKPSNIAVNEDCE---LKILDFGLARPTENEMT--GYVATRWYRAPEIM 237
HS GI+HR+LKP N+ + + +K+ DFGLA + G+ T Y +PE++
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126
D+ L K +F ++ + +G++ A K I SA ++ RE R+ + + H N+
Sbjct: 9 DVKEELGKGAFSVV-RRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYI 184
+ L D + F Y+V L+ G +I+ + S+ + QIL + Y
Sbjct: 68 VRLHDSIQEES----FH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 185 HSAGIIHRDLKPSNIAVNEDCE---LKILDFGLARPTENEMT--GYVATRWYRAPEIM 237
HS GI+HR+LKP N+ + + +K+ DFGLA + G+ T Y +PE++
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126
D+ L K +F ++ + +G++ A K I SA ++ RE R+ + + H N+
Sbjct: 8 DVKEELGKGAFSVV-RRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 66
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYI 184
+ L D + F Y+V L+ G +I+ + S+ + QIL + Y
Sbjct: 67 VRLHDSIQEES----FH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 185 HSAGIIHRDLKPSNIAVNEDCE---LKILDFGLARPTENEMT--GYVATRWYRAPEIM 237
HS GI+HR+LKP N+ + + +K+ DFGLA + G+ T Y +PE++
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 178
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N + L F N+ N+YMV G +++ R + +
Sbjct: 89 TLNEKRILQAVNFPFLTKLEFSFKDNS------NLYMVMEYAPGGEMFSHLRRIGRFXEP 142
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +K+ DFG A+ + T
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 229 RWYRAPEIMLN 239
Y APEI+L+
Sbjct: 203 PEYLAPEIILS 213
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP N+ +++ +K+ DFG A+ + T Y APEI+L+ + D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 312 LN-LIMEM-LGTPP 323
L LI EM G PP
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 100 RPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLN 157
+ + V K E+ +L ++H N+I L ++F + T + +V L+ G +
Sbjct: 84 KVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPT------EISLVLELVTGGELFD 137
Query: 158 NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE---DCELKILDFGL 214
I+ S+ V QIL + Y+H GI+HRDLKP N+ D LKI DFGL
Sbjct: 138 RIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGL 197
Query: 215 ARPTENE--MTGYVATRWYRAPEIM 237
++ E++ M T Y APEI+
Sbjct: 198 SKIVEHQVLMKTVCGTPGYCAPEIL 222
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 253 QDLKPSNIAVNE---DCELKILDFGLARPTENE--MTGYVATRWYRAPEIMLNWMHYNQT 307
+DLKP N+ D LKI DFGL++ E++ M T Y APEI+ + +
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 308 DIHQLNLIMEML 319
D+ + +I +L
Sbjct: 232 DMWSVGIITYIL 243
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 113
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 114 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 169
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 170 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKL-SDD 168
RT E +L +NH ++ L F + L ++ L G DL L + + +++
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKL-----YLILDFLRGGDLFTRLSKEVMFTEE 126
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGY 225
V+F + ++ L ++HS GII+RDLKP NI ++E+ +K+ DFGL++ + E + +
Sbjct: 127 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 226 VATRWYRAPEIM 237
T Y APE++
Sbjct: 187 CGTVEYMAPEVV 198
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE ++ Y+A E+ L H + G+ ++DLKP NI ++E+ +K+ DFGL++
Sbjct: 124 TEEDVKFYLA-------ELALALDHLHSLGI--IYRDLKPENILLDEEGHIKLTDFGLSK 174
Query: 278 PT---ENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
+ E + + T Y APE++ H D ++M EML GT P
Sbjct: 175 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 82
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 83 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 138
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 139 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 187
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 28 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 85
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 86 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 141
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 142 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 190
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 46 PSRRLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA 105
P R+L ++ V D+ L + S+ ++ A+ +G VAIK++ P +S
Sbjct: 11 PRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYK-AIHKETGQIVAIKQV--PVESD 67
Query: 106 VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGA-DLNNI--LRT 162
+ + +E+ +++ + +V+ + NT ++++V GA +++I LR
Sbjct: 68 L--QEIIKEISIMQQCDSPHVVKYYGSYFKNT------DLWIVMEYCGAGSVSDIIRLRN 119
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222
+ L++D + ++ L+GL+Y+H IHRD+K NI +N + K+ DFG+A + M
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXM 179
Query: 223 TG---YVATRWYRAPEIM 237
+ T ++ APE++
Sbjct: 180 AKRNXVIGTPFWMAPEVI 197
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG---YVATRWYRA 294
L ++H+ + +D+K NI +N + K+ DFG+A + M + T ++ A
Sbjct: 138 LEYLHFMRK----IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMA 193
Query: 295 PEIMLNWMHYNQTDIHQLNLI-MEML-GTPP 323
PE++ + DI L + +EM G PP
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 29 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 86
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 87 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 142
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 143 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 191
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 24 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 81
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 82 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 137
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 138 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 186
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
DIG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 14 FDIGRPLGKGKFGNVYL-ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT-QKLS---DDHVQFLVYQILRG 180
N++ L FH T VY++ L A L + R QKLS + + ++
Sbjct: 73 NILRLYGYFHDAT------RVYLI--LEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 181 LKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLN 239
L Y HS +IHRD+KP N+ + + ELKI DFG + + T T Y PE++
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 240 WMH 242
MH
Sbjct: 185 RMH 187
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 195
Query: 312 LNLIME--MLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXX 369
L ++ ++G PP F A ++ R+ S T DF V +GA
Sbjct: 196 LGVLCYEFLVGMPP--FEAHTYQETYRRI--SRVEFTFPDF--VTEGAR----DLISRLL 245
Query: 370 XXXXXKRITAEQALAHPYLSQYS 392
+R+T + L HP++ S
Sbjct: 246 KHNASQRLTLAEVLEHPWIKANS 268
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 23 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 80
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 81 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 136
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 137 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 185
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 32 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 89
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 90 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 145
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 146 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 194
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 82
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 83 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 138
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 139 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 187
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDD 168
T E R+L+ +N ++ L F N+ N+YMV + G +++ R + S+
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNS------NLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228
H +F QI+ +Y+HS +I+RDLKP N+ +++ +++ DFG A+ + T
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 229 RWYRAPEIMLN 239
APEI+L+
Sbjct: 202 PEALAPEIILS 212
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287
R+Y A +I+L + + + + ++DLKP N+ +++ +++ DFG A+ +
Sbjct: 143 ARFY-AAQIVLTFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC 199
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLN-LIMEM-LGTPP 323
T APEI+L+ + D L LI EM G PP
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 30 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 87
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 88 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 143
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 144 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 192
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 31 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 88
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 89 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 144
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 145 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 193
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 43 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 100
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 101 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 156
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 157 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 205
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 82
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 83 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 138
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEM-----TGYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 139 DLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APE 187
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 43 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 100
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 101 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 156
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 157 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 205
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKL-SDD 168
RT E +L +NH ++ L F + L ++ L G DL L + + +++
Sbjct: 73 RTKMERDILVEVNHPFIVKLHYAFQTEGKL-----YLILDFLRGGDLFTRLSKEVMFTEE 127
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGY 225
V+F + ++ L ++HS GII+RDLKP NI ++E+ +K+ DFGL++ + E + +
Sbjct: 128 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 226 VATRWYRAPEIM 237
T Y APE++
Sbjct: 188 CGTVEYMAPEVV 199
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE ++ Y+A E+ L H + G+ ++DLKP NI ++E+ +K+ DFGL++
Sbjct: 125 TEEDVKFYLA-------ELALALDHLHSLGI--IYRDLKPENILLDEEGHIKLTDFGLSK 175
Query: 278 PT---ENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
+ E + + T Y APE++ H D ++M EML GT P
Sbjct: 176 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 28 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 85
Query: 136 NTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ + L L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 86 ----AGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 141
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 142 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 190
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 36 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH D VY++ +G + + K + + ++ L
Sbjct: 95 NILRLYGYFH------DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 242 H 242
H
Sbjct: 209 H 209
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 218 LGVLCYEFLVGKPPFE 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKL-SDD 168
RT E +L +NH ++ L F + L ++ L G DL L + + +++
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKL-----YLILDFLRGGDLFTRLSKEVMFTEE 126
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGY 225
V+F + ++ L ++HS GII+RDLKP NI ++E+ +K+ DFGL++ + E + +
Sbjct: 127 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 226 VATRWYRAPEIM 237
T Y APE++
Sbjct: 187 CGTVEYMAPEVV 198
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE ++ Y+A E+ L H + G+ ++DLKP NI ++E+ +K+ DFGL++
Sbjct: 124 TEEDVKFYLA-------ELALALDHLHSLGI--IYRDLKPENILLDEEGHIKLTDFGLSK 174
Query: 278 PT---ENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
+ E + + T Y APE++ H D ++M EML GT P
Sbjct: 175 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143
A+ + ++ A KKI + F V R +E+ ++K ++H N+I L + F NT
Sbjct: 28 AVQKGTRIRRAAKKIPKYFVEDVD--RFKQEIEIMKSLDHPNIIRLYETFEDNT------ 79
Query: 144 NVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSN--- 198
++Y+V L G ++ + + ++ +L + Y H + HRDLKP N
Sbjct: 80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLF 139
Query: 199 IAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
+ + D LK++DFGLA +P + M V T +Y +P+++
Sbjct: 140 LTDSPDSPLKLIDFGLAARFKPGKM-MRTKVGTPYYVSPQVL 180
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 253 QDLKPSN---IAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DLKP N + + D LK++DFGLA +P + M V T +Y +P++ L ++ +
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKVGTPYYVSPQV-LEGLYGPE 187
Query: 307 TDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXX 364
D ++M +L G PP F A + K +KD+ V +PQA
Sbjct: 188 CDEWSAGVMMYVLLCGYPP--FSAPTDXEVMLKIREGTFTFPEKDWLNV----SPQAESL 241
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQ 390
+RIT+ QAL H + +
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + + + H++V+G F N DF V + + L R + L++ ++
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDN----DFVFVVLELCRRRSLLELHKRRKALTEPEARYY 126
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE---NEMTGYVATRW 230
+ QI+ G +Y+H +IHRDLK N+ +NED E+KI DFGLA E T
Sbjct: 127 LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 186
Query: 231 YRAPEIMLNWMHYNQTGV 248
Y APE++ H + V
Sbjct: 187 YIAPEVLSKKGHSFEVDV 204
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 228 TRWY-RAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTE---NEM 283
R+Y R + ++H N+ +DLK N+ +NED E+KI DFGLA E
Sbjct: 123 ARYYLRQIVLGCQYLHRNRV----IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 178
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
T Y APE++ H + D+ + IM L G PP E
Sbjct: 179 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143
A+ + ++ A KKI + F V R +E+ ++K ++H N+I L + F NT
Sbjct: 45 AVQKGTRIRRAAKKIPKYFVEDVD--RFKQEIEIMKSLDHPNIIRLYETFEDNT------ 96
Query: 144 NVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSN--- 198
++Y+V L G ++ + + ++ +L + Y H + HRDLKP N
Sbjct: 97 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLF 156
Query: 199 IAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
+ + D LK++DFGLA +P + M V T +Y +P+++
Sbjct: 157 LTDSPDSPLKLIDFGLAARFKPGKM-MRTKVGTPYYVSPQVL 197
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 253 QDLKPSN---IAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DLKP N + + D LK++DFGLA +P + M V T +Y +P++ L ++ +
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKVGTPYYVSPQV-LEGLYGPE 204
Query: 307 TDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXX 364
D ++M +L G PP F A + K +KD+ V +PQA
Sbjct: 205 CDEWSAGVMMYVLLCGYPP--FSAPTDXEVMLKIREGTFTFPEKDWLNV----SPQAESL 258
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQ 390
+RIT+ QAL H + +
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNIL-RTQKLSDDHVQF 172
E+ +L + H N+I +LD+F + F + M H G DL + R +L + +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQ----GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY 134
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY--VATRW 230
+ Q++ + Y+ IIHRD+K NI + ED +K++DFG A E Y T
Sbjct: 135 IFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIE 194
Query: 231 YRAPEIMLN 239
Y APE+++
Sbjct: 195 YCAPEVLMG 203
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGY--VATRWYRAPEIMLN 300
+D+K NI + ED +K++DFG A E Y T Y APE+++
Sbjct: 154 RDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG 203
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + + + H++V+G F N DF V + + L R + L++ ++
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDN----DFVFVVLELCRRRSLLELHKRRKALTEPEARYY 122
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE---NEMTGYVATRW 230
+ QI+ G +Y+H +IHRDLK N+ +NED E+KI DFGLA E T
Sbjct: 123 LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 182
Query: 231 YRAPEIMLNWMHYNQTGV 248
Y APE++ H + V
Sbjct: 183 YIAPEVLSKKGHSFEVDV 200
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 228 TRWY-RAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTE---NEM 283
R+Y R + ++H N+ +DLK N+ +NED E+KI DFGLA E
Sbjct: 119 ARYYLRQIVLGCQYLHRNRV----IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
T Y APE++ H + D+ + IM L G PP E
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + + + H++V+G F N DF V + + L R + L++ ++
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDN----DFVFVVLELCRRRSLLELHKRRKALTEPEARYY 122
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE---NEMTGYVATRW 230
+ QI+ G +Y+H +IHRDLK N+ +NED E+KI DFGLA E T
Sbjct: 123 LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 182
Query: 231 YRAPEIMLNWMHYNQTGV 248
Y APE++ H + V
Sbjct: 183 YIAPEVLSKKGHSFEVDV 200
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 228 TRWY-RAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTE---NEM 283
R+Y R + ++H N+ +DLK N+ +NED E+KI DFGLA E
Sbjct: 119 ARYYLRQIVLGCQYLHRNRV----IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
T Y APE++ H + D+ + IM L G PP E
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 71 TLSKESFD---LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVI 127
TL SF LI S +KV K+I + H T E ML + H +I
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEH---TNDERLMLSIVTHPFII 69
Query: 128 GLLDVFHSNTCLADFKNVYMVT-HLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIH 185
+ F D + ++M+ ++ G +L ++LR +Q+ + +F ++ L+Y+H
Sbjct: 70 RMWGTFQ------DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 237
S II+RDLKP NI ++++ +KI DFG A+ + T Y APE++
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVV 175
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
++DLKP NI ++++ +KI DFG A+ + T Y APE++ + D
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWS 188
Query: 312 LN-LIMEMLG 320
LI EML
Sbjct: 189 FGILIYEMLA 198
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 10 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 69 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 242 H 242
H
Sbjct: 183 H 183
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 192 LGVLCYEFLVGKPPFE 207
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + + + H++V+G F N DF V + + L R + L++ ++
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDN----DFVFVVLELCRRRSLLELHKRRKALTEPEARYY 146
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVAT 228
+ QI+ G +Y+H +IHRDLK N+ +NED E+KI DFGLA T+ E G T
Sbjct: 147 LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGT 204
Query: 229 RWYRAPEIMLNWMHYNQTGV 248
Y APE++ H + V
Sbjct: 205 PNYIAPEVLSKKGHSFEVDV 224
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 228 TRWY-RAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG- 285
R+Y R + ++H N+ +DLK N+ +NED E+KI DFGLA T+ E G
Sbjct: 143 ARYYLRQIVLGCQYLHRNRV----IHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGE 196
Query: 286 ----YVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
T Y APE++ H + D+ + IM L G PP E
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 10 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 69 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 242 H 242
H
Sbjct: 183 H 183
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 192 LGVLCYEFLVGKPPFE 207
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + + + H++V+G F N DF V + + L R + L++ ++
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDN----DFVFVVLELCRRRSLLELHKRRKALTEPEARYY 144
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVAT 228
+ QI+ G +Y+H +IHRDLK N+ +NED E+KI DFGLA T+ E G T
Sbjct: 145 LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGT 202
Query: 229 RWYRAPEIMLNWMHYNQTGV 248
Y APE++ H + V
Sbjct: 203 PNYIAPEVLSKKGHSFEVDV 222
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 228 TRWY-RAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG- 285
R+Y R + ++H N+ +DLK N+ +NED E+KI DFGLA T+ E G
Sbjct: 141 ARYYLRQIVLGCQYLHRNRV----IHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGE 194
Query: 286 ----YVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
T Y APE++ H + D+ + IM L G PP E
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A+D +G +VAI+++ Q + E+ +++ + N++ LD + + D
Sbjct: 38 TAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDE 91
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
V M +L G L +++ + + + + + L+ L+++HS +IHRD+K NI +
Sbjct: 92 LWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 203 EDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
D +K+ DFG P +++ + V T ++ APE++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRA 294
L ++H NQ +D+K NI + D +K+ DFG P +++ + V T ++ A
Sbjct: 129 LEFLHSNQV----IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 184
Query: 295 PEIMLNWMHYNQTDIHQLNLI-MEML-GTPP 323
PE++ + + DI L ++ +EM+ G PP
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 15 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 74 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 242 H 242
H
Sbjct: 188 H 188
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 197 LGVLCYEFLVGKPPFE 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 27 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 85
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH D VY++ +G + + K + + ++ L
Sbjct: 86 NILRLYGYFH------DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 140 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 242 H 242
H
Sbjct: 200 H 200
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 208
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 209 LGVLCYEFLVGKPPFE 224
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 11 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 70 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 242 H 242
H
Sbjct: 184 H 184
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 193 LGVLCYEFLVGKPPFE 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 10 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 69 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 242 H 242
H
Sbjct: 183 H 183
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 192 LGVLCYEFLVGKPPFE 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 15 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 74 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 242 H 242
H
Sbjct: 188 H 188
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 197 LGVLCYEFLVGKPPFE 212
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 10 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 69 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 242 H 242
H
Sbjct: 183 H 183
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 192 LGVLCYEFLVGKPPFE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 14 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 73 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 242 H 242
H
Sbjct: 187 H 187
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 136 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 195
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 196 LGVLCYEFLVGKPPFE 211
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GCLLKYIRKIGSFDETCTRF 136
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 197 TAQYVSPELL 206
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ + Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 107 LYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 161
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALG 221
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A+D +G +VAI+++ Q + E+ +++ + N++ LD + + D
Sbjct: 38 TAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDE 91
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
V M +L G L +++ + + + + + L+ L+++HS +IHRD+K NI +
Sbjct: 92 LWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 203 EDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
D +K+ DFG P +++ + V T ++ APE++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRA 294
L ++H NQ +D+K NI + D +K+ DFG P +++ + V T ++ A
Sbjct: 129 LEFLHSNQV----IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 184
Query: 295 PEIMLNWMHYNQTDIHQLNLI-MEML-GTPP 323
PE++ + + DI L ++ +EM+ G PP
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 13 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 72 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 242 H 242
H
Sbjct: 186 H 186
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 195 LGVLCYEFLVGKPPFE 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 9 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 67
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 68 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 122 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 242 H 242
H
Sbjct: 182 H 182
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 131 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 190
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 191 LGVLCYEFLVGKPPFE 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 10 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 69 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 242 H 242
H
Sbjct: 183 H 183
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 192 LGVLCYEFLVGKPPFE 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A+D +G +VAI+++ Q + E+ +++ + N++ LD + + D
Sbjct: 39 TAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDE 92
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
V M +L G L +++ + + + + + L+ L+++HS +IHRD+K NI +
Sbjct: 93 LWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 151
Query: 203 EDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
D +K+ DFG P +++ + V T ++ APE++
Sbjct: 152 MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRA 294
L ++H NQ +D+K NI + D +K+ DFG P +++ + V T ++ A
Sbjct: 130 LEFLHSNQV----IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 185
Query: 295 PEIMLNWMHYNQTDIHQLNLI-MEML-GTPP 323
PE++ + + DI L ++ +EM+ G PP
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143
A ++G VAIK + + + R E+ LK++ H+++ L V +
Sbjct: 29 ACHILTGEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHVLETAN------ 81
Query: 144 NVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
++MV G + I+ +LS++ + + QI+ + Y+HS G HRDLKP N+
Sbjct: 82 KIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLF 141
Query: 202 NEDCELKILDFGL-ARPTENE---MTGYVATRWYRAPEIM 237
+E +LK++DFGL A+P N+ + + Y APE++
Sbjct: 142 DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 22/186 (11%)
Query: 253 QDLKPSNIAVNEDCELKILDFGL-ARPTENE---MTGYVATRWYRAPEIMLNWMHY-NQT 307
+DLKP N+ +E +LK++DFGL A+P N+ + + Y APE++ + ++
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEA 191
Query: 308 DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF---KGANPQAIXX 364
D+ + +++ +L F +++ L KK R + K +P +I
Sbjct: 192 DVWSMGILLYVLMCGFLPFDD-----------DNVMALYKKIMRGKYDVPKWLSPSSILL 240
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQ-YSDPNDEPTSPPYDQSFEDM--DLPVDQWKGTY 421
KRI+ + L HP++ Q Y+ P + + P+ +D +L V
Sbjct: 241 LQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRNNRQ 300
Query: 422 SLESLV 427
++E L+
Sbjct: 301 TMEDLI 306
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A+D +G +VAI+++ Q + E+ +++ + N++ LD + + D
Sbjct: 38 TAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDE 91
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
V M +L G L +++ + + + + + L+ L+++HS +IHRD+K NI +
Sbjct: 92 LWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 203 EDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
D +K+ DFG P +++ + V T ++ APE++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRA 294
L ++H NQ +D+K NI + D +K+ DFG P +++ + V T ++ A
Sbjct: 129 LEFLHSNQV----IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMA 184
Query: 295 PEIMLNWMHYNQTDIHQLNLI-MEML-GTPP 323
PE++ + + DI L ++ +EM+ G PP
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + + + H++V+G F N DF V + + L R + L++ ++
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDN----DFVFVVLELCRRRSLLELHKRRKALTEPEARYY 120
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE---NEMTGYVATRW 230
+ QI+ G +Y+H +IHRDLK N+ +NED E+KI DFGLA E T
Sbjct: 121 LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 180
Query: 231 YRAPEIMLNWMHYNQTGV 248
Y APE++ H + V
Sbjct: 181 YIAPEVLSKKGHSFEVDV 198
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 228 TRWY-RAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTE---NEM 283
R+Y R + ++H N+ +DLK N+ +NED E+KI DFGLA E
Sbjct: 117 ARYYLRQIVLGCQYLHRNRV----IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
T Y APE++ H + D+ + IM L G PP E
Sbjct: 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
DIG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 14 FDIGRPLGKGKFGNVYL-ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT-QKLS---DDHVQFLVYQILRG 180
N++ L FH T VY++ L A L + R QKLS + + ++
Sbjct: 73 NILRLYGYFHDAT------RVYLI--LEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 181 LKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA--RPTENEMTGYVATRWYRAPEIML 238
L Y HS +IHRD+KP N+ + + ELKI DFG + P+ T T Y PE++
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPEMIE 183
Query: 239 NWMH 242
MH
Sbjct: 184 GRMH 187
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 13 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 72 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 242 H 242
H
Sbjct: 186 H 186
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 195 LGVLCYEFLVGKPPFE 210
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 134
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 195 TAQYVSPELL 204
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 159
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALG 219
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 220 CIIYQLVAGLPP 231
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 10 FEIGRPLGKGKFGNVYL-AREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH +T VY++ +G + + K + + ++ L
Sbjct: 69 NILRLYGYFHDST------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T Y PE++ M
Sbjct: 123 YCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 242 H 242
H
Sbjct: 183 H 183
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T Y PE++ MH + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 192 LGVLCYEFLVGKPPFE 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 11 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH D VY++ +G + + K + + ++ L
Sbjct: 70 NILRLYGYFH------DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 242 H 242
H
Sbjct: 184 H 184
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 193 LGVLCYEFLVGKPPFE 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 137
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 198 TAQYVSPELL 207
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 108 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 162
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 163 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALG 222
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 223 CIIYQLVAGLPP 234
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHV 170
RE ++ ++H + L C D + +Y G L I + +
Sbjct: 86 RERDVMSRLDHPFFVKLY------FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT 139
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGY 225
+F +I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +
Sbjct: 140 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 226 VATRWYRAPEIM 237
V T Y +PE++
Sbjct: 200 VGTAQYVSPELL 211
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 112 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 166
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 167 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 226
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 227 CIIYQLVAGLPP 238
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 23/102 (22%)
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR---------------- 216
L QIL L YIHS GIIHRDLKP NI ++E +KI DFGLA+
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 217 -PTENEMTGYVATRWYRAPEIMLNWMHYNQT------GVPFY 251
+ + +T + T Y A E++ HYN+ G+ F+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 18/97 (18%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR-----------------PTENEMTGYVATRWYRAP 295
+DLKP NI ++E +KI DFGLA+ + + +T + T Y A
Sbjct: 140 RDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT 199
Query: 296 EIMLNWMHYNQ-TDIHQLNLIMEMLGTPPAEFMAKIS 331
E++ HYN+ D++ L +I + P + M +++
Sbjct: 200 EVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN 236
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR---------------- 216
L QIL L YIHS GIIHRDLKP NI ++E +KI DFGLA+
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 217 -PTENEMTGYVATRWYRAPEIMLNWMHYNQ 245
+ + +T + T Y A E++ HYN+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 18/97 (18%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR-----------------PTENEMTGYVATRWYRAP 295
+DLKP NI ++E +KI DFGLA+ + + +T + T Y A
Sbjct: 140 RDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT 199
Query: 296 EIMLNWMHYNQ-TDIHQLNLIMEMLGTPPAEFMAKIS 331
E++ HYN+ D++ L +I + P + M +++
Sbjct: 200 EVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN 236
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 71 TLSKESFDLIFSSALDSVSGVK-VAIKKIARPFQSAVHAKRTYRE------LRMLKHM-- 121
+L + FDL+ S + V V +KK R + V K + ++ KH+
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 122 ---NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQI 177
NH ++GL F + + L +++ ++ G DL ++ R +KL ++H +F +I
Sbjct: 108 QASNHPFLVGLHSCFQTESRL-----FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 162
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA----RPTENEMTGYVATRWYRA 233
L Y+H GII+RDLK N+ ++ + +K+ D+G+ RP + T + T Y A
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIA 221
Query: 234 PEIM 237
PEI+
Sbjct: 222 PEIL 225
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 228 TRWYRAP-EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA----RPTENE 282
R+Y A + LN++H + G+ ++DLK N+ ++ + +K+ D+G+ RP +
Sbjct: 155 ARFYSAEISLALNYLH--ERGI--IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 210
Query: 283 MTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM--EMLGTPPAEFMAKISSDS 334
T + T Y APEI+ + D L ++M M G P + + SSD+
Sbjct: 211 ST-FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG--SSDN 261
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 28 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 85
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ DH++ L Y QI +G++Y+ + IHR
Sbjct: 86 ----AGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHR 141
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPE 235
DL NI V + +KI DFGL + P + E G WY APE
Sbjct: 142 DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 190
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 153 GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212
G L I + + +F +I+ L+Y+H GIIHRDLKP NI +NED ++I DF
Sbjct: 114 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
Query: 213 GLAR-----PTENEMTGYVATRWYRAPEIM 237
G A+ + +V T Y +PE++
Sbjct: 174 GTAKVLSPESKQARANSFVGTAQYVSPELL 203
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEI-MLNWMHYNQTGVPFYFQDLKPSN 259
L FGL+ E+ Y+ TR+Y A + L ++H G +DLKP N
Sbjct: 104 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH----GKGIIHRDLKPEN 159
Query: 260 IAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNL 314
I +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 315 IMEML--GTPP 323
I+ L G PP
Sbjct: 220 IIYQLVAGLPP 230
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 13 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 72 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T Y PE++ M
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 242 H 242
H
Sbjct: 186 H 186
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T Y PE++ MH + D+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 195 LGVLCYEFLVGKPPFE 210
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 14/132 (10%)
Query: 121 MNHENVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQI 177
M N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++
Sbjct: 83 MGGPNIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYEL 134
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAP 234
L+ L Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 235 EIMLNWMHYNQT 246
E++++ Y+ +
Sbjct: 195 ELLVDLQDYDYS 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 10 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 69 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T Y PE++ M
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 242 H 242
H
Sbjct: 183 H 183
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T Y PE++ MH + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 192 LGVLCYEFLVGKPPFE 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 114
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 175 TAQYVSPELL 184
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 85 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 139
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 140 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 199
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 200 CIIYQLVAGLPP 211
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 136
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 197 TAQYVSPELL 206
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 161
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 221
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 15 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ G + + K + + ++ L
Sbjct: 74 NILRLYGYFHDAT------RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 242 H 242
H
Sbjct: 188 H 188
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 197 LGVLCYEFLVGKPPFE 212
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 136
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 197 TAQYVSPELL 206
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 161
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALG 221
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 134
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 195 TAQYVSPELL 204
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 159
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 219
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 220 CIIYQLVAGLPP 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 137
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 198 TAQYVSPELL 207
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 108 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 162
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 163 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 222
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 223 CIIYQLVAGLPP 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 113
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 174 TAQYVSPELL 183
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 84 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 138
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 139 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 198
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 199 CIIYQLVAGLPP 210
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 134
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 195 TAQYVSPELL 204
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 159
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 219
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 220 CIIYQLVAGLPP 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
L K +F ++ + ++G + A K I SA ++ RE R+ + + H N++ L D
Sbjct: 30 LGKGAFSVV-RRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 132 VFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI 189
+++ + Y++ L+ G +I+ + S+ + QIL + + H G+
Sbjct: 89 ------SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 190 IHRDLKPSNIAVN---EDCELKILDFGLARPTENEMT---GYVATRWYRAPEIM 237
+HRDLKP N+ + + +K+ DFGLA E E G+ T Y +PE++
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 196
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 38/177 (21%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVN---EDCELKILDFGLARPTENEMT---GYVA 288
+I+ +H +Q GV +DLKP N+ + + +K+ DFGLA E E G+
Sbjct: 129 QILEAVLHCHQMGV--VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 186
Query: 289 TRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLT 346
T Y +PE++ + D+ +I+ +L G PP D R Y
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF-----WDEDQHRLY-------- 233
Query: 347 KKDFRQVFKGA-----------NPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
+Q+ GA P+A KRITA +AL HP++S S
Sbjct: 234 ----QQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRS 286
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 139
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 200 TAQYVSPELL 209
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 110 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 164
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 165 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 224
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 225 CIIYQLVAGLPP 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 134
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 195 TAQYVSPELL 204
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 159
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 219
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 220 CIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 136
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 197 TAQYVSPELL 206
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 161
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 221
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 136
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 197 TAQYVSPELL 206
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 161
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 221
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 56 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 111
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 172 TAQYVSPELL 181
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 82 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 136
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 137 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 196
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 197 CIIYQLVAGLPP 208
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 108 AKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLN-NILRTQKL 165
+ ++EL++++ + H ++ L F D ++++MV L+ G DL ++ +
Sbjct: 59 VRNVFKELQIMQGLEHPFLVNLWYSFQ------DEEDMFMVVDLLLGGDLRYHLQQNVHF 112
Query: 166 SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR--PTENEMT 223
++ V+ + +++ L Y+ + IIHRD+KP NI ++E + I DF +A P E ++T
Sbjct: 113 KEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172
Query: 224 GYVATRWYRAPEI 236
T+ Y APE+
Sbjct: 173 TMAGTKPYMAPEM 185
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR--PTENEMTGYVATRWYRAPEI 297
+D+KP NI ++E + I DF +A P E ++T T+ Y APE+
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEM 185
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 125 NVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGL 181
N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++L+ L
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYELLKAL 140
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAPEIML 238
Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ PE+++
Sbjct: 141 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 200
Query: 239 NWMHYNQT 246
+ Y+ +
Sbjct: 201 DLQDYDYS 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 136
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 197 TAQYVSPELL 206
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 161
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 221
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135
S ++ L +G VA+KK+ + H + RE+ +LK + H+N++ V +S
Sbjct: 26 SVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVKYKGVCYS 83
Query: 136 NTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
A +N+ ++ +L L + L+ K DH++ L Y QI +G++Y+ + IHR
Sbjct: 84 ----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR 139
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEM-----TGYVATRWYRAPE 235
+L NI V + +KI DFGL + P + E G WY APE
Sbjct: 140 NLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APE 188
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
RE ++ ++H + L F + L F Y G L I + + +F
Sbjct: 57 RERDVMSRLDHPFFVKLYFTFQDDEKLY-FGLSYAKN---GELLKYIRKIGSFDETCTRF 112
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----PTENEMTGYVA 227
+I+ L+Y+H GIIHRDLKP NI +NED ++I DFG A+ + +V
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 228 TRWYRAPEIM 237
T Y +PE++
Sbjct: 173 TAQYVSPELL 182
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEIM--LNWMHYNQTGVPFYFQDLKPS 258
L FGL+ E+ Y+ TR+Y A EI+ L ++H G +DLKP
Sbjct: 83 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH----GKGIIHRDLKPE 137
Query: 259 NIAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313
NI +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 138 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 197
Query: 314 LIMEML--GTPP 323
I+ L G PP
Sbjct: 198 CIIYQLVAGLPP 209
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 125 NVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGL 181
N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++L+ L
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYELLKAL 139
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAPEIML 238
Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ PE+++
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 199
Query: 239 NWMHYNQT 246
+ Y+ +
Sbjct: 200 DLQDYDYS 207
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 125 NVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGL 181
N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++L+ L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYELLKAL 138
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAPEIML 238
Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ PE+++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 239 NWMHYNQT 246
+ Y+ +
Sbjct: 199 DLQDYDYS 206
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 125 NVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGL 181
N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++L+ L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYELLKAL 138
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAPEIML 238
Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ PE+++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 239 NWMHYNQT 246
+ Y+ +
Sbjct: 199 DLQDYDYS 206
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 125 NVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGL 181
N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++L+ L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYELLKAL 138
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAPEIML 238
Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ PE+++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 239 NWMHYNQT 246
+ Y+ +
Sbjct: 199 DLQDYDYS 206
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 153 GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212
G L I + + +F +I+ L+Y+H GIIHRDLKP NI +NED ++I DF
Sbjct: 114 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
Query: 213 GLAR-----PTENEMTGYVATRWYRAPEIM 237
G A+ + +V T Y +PE++
Sbjct: 174 GTAKVLSPESKQARANXFVGTAQYVSPELL 203
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEI-MLNWMHYNQTGVPFYFQDLKPSN 259
L FGL+ E+ Y+ TR+Y A + L ++H G +DLKP N
Sbjct: 104 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH----GKGIIHRDLKPEN 159
Query: 260 IAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNL 314
I +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 315 IMEML--GTPP 323
I+ L G PP
Sbjct: 220 IIYQLVAGLPP 230
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 125 NVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGL 181
N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++L+ L
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYELLKAL 159
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAPEIML 238
Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ PE+++
Sbjct: 160 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 219
Query: 239 NWMHYNQT 246
+ Y+ +
Sbjct: 220 DLQDYDYS 227
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 125 NVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGL 181
N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++L+ L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYELLKAL 138
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAPEIML 238
Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ PE+++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 239 NWMHYNQT 246
+ Y+ +
Sbjct: 199 DLQDYDYS 206
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 125 NVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGL 181
N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++L+ L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYELLKAL 138
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAPEIML 238
Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ PE+++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 239 NWMHYNQT 246
+ Y+ +
Sbjct: 199 DLQDYDYS 206
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 113 RELRMLK-HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGA----DLNNILRTQKLSD 167
+E+ MLK + +H N+ F +++V GA DL + L +
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 168 DHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP---TENEMTG 224
+ + ++ +ILRGL ++H +IHRD+K N+ + E+ E+K++DFG++ T
Sbjct: 129 EWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT 188
Query: 225 YVATRWYRAPEIM 237
++ T ++ APE++
Sbjct: 189 FIGTPYWMAPEVI 201
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 231 YRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP---TENEMTGYV 287
Y EI+ H +Q V +D+K N+ + E+ E+K++DFG++ T ++
Sbjct: 133 YICREILRGLSHLHQHKV--IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI 190
Query: 288 ATRWYRAPEIM 298
T ++ APE++
Sbjct: 191 GTPYWMAPEVI 201
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 125 NVIGLLDVF---HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGL 181
N++ LLD+ HS T F+ ++ D + T L+D +++ +Y++L+ L
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFE------YVNNTDFKVLYPT--LTDYDIRYYIYELLKAL 139
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE--NEMTGYVATRWYRAPEIML 238
Y HS GI+HRD+KP N+ ++ + +L+++D+GLA E VA+R+++ PE+++
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 199
Query: 239 NWMHYNQT 246
+ Y+ +
Sbjct: 200 DLQDYDYS 207
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 153 GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212
G L I + + +F +I+ L+Y+H GIIHRDLKP NI +NED ++I DF
Sbjct: 99 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 158
Query: 213 GLAR-----PTENEMTGYVATRWYRAPEIM 237
G A+ + +V T Y +PE++
Sbjct: 159 GTAKVLSPESKQARANXFVGTAQYVSPELL 188
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 210 LDFGLARPTENEMTGYV---------ATRWYRAPEI-MLNWMHYNQTGVPFYFQDLKPSN 259
L FGL+ E+ Y+ TR+Y A + L ++H G +DLKP N
Sbjct: 89 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH----GKGIIHRDLKPEN 144
Query: 260 IAVNEDCELKILDFGLAR-----PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNL 314
I +NED ++I DFG A+ + +V T Y +PE++ +D+ L
Sbjct: 145 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 204
Query: 315 IMEML--GTPP 323
I+ L G PP
Sbjct: 205 IIYQLVAGLPP 215
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 71 TLSKESFDLIFSSALDSVSGVK-VAIKKIARPFQSAVHAKRTYRE------LRMLKHM-- 121
+L + FDL+ S + V V +KK R + V K + ++ KH+
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 122 ---NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQI 177
NH ++GL F + + L +++ ++ G DL ++ R +KL ++H +F +I
Sbjct: 61 QASNHPFLVGLHSCFQTESRL-----FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 115
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA----RPTENEMTGYVATRWYRA 233
L Y+H GII+RDLK N+ ++ + +K+ D+G+ RP + + + T Y A
Sbjct: 116 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFCGTPNYIA 174
Query: 234 PEIM 237
PEI+
Sbjct: 175 PEIL 178
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 228 TRWYRAP-EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA----RPTENE 282
R+Y A + LN++H + G+ ++DLK N+ ++ + +K+ D+G+ RP +
Sbjct: 108 ARFYSAEISLALNYLH--ERGI--IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT- 162
Query: 283 MTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM--EMLGTPPAEFMAKISSDS 334
+ + T Y APEI+ + D L ++M M G P + + SSD+
Sbjct: 163 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG--SSDN 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQ 171
E+ +L +H N++ LLD F+ L ++ G ++ ++ + L++ +Q
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLW-----ILIEFCAGGAVDAVMLELERPLTESQIQ 111
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA----RPTENEMTGYVA 227
+ Q L L Y+H IIHRDLK NI D ++K+ DFG++ R ++
Sbjct: 112 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIG 171
Query: 228 TRWYRAPEIML 238
T ++ APE+++
Sbjct: 172 TPYWMAPEVVM 182
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA----RPTENEMTGYVATRWYR 293
LN++H N+ +DLK NI D ++K+ DFG++ R ++ T ++
Sbjct: 121 LNYLHDNK----IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWM 176
Query: 294 APEIML 299
APE+++
Sbjct: 177 APEVVM 182
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 71 TLSKESFDLIFSSALDSVSGVK-VAIKKIARPFQSAVHAKRTYRE------LRMLKHM-- 121
+L + FDL+ S + V V +KK R + V K + ++ KH+
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 122 ---NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQI 177
NH ++GL F + + L +++ ++ G DL ++ R +KL ++H +F +I
Sbjct: 76 QASNHPFLVGLHSCFQTESRL-----FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 130
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA----RPTENEMTGYVATRWYRA 233
L Y+H GII+RDLK N+ ++ + +K+ D+G+ RP + + + T Y A
Sbjct: 131 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFCGTPNYIA 189
Query: 234 PEIM 237
PEI+
Sbjct: 190 PEIL 193
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 228 TRWYRAP-EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA----RPTENE 282
R+Y A + LN++H + G+ ++DLK N+ ++ + +K+ D+G+ RP +
Sbjct: 123 ARFYSAEISLALNYLH--ERGI--IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT- 177
Query: 283 MTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM--EMLGTPPAEFMAKISSDS 334
+ + T Y APEI+ + D L ++M M G P + + SSD+
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG--SSDN 229
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 36 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH D VY++ +G + + K + + ++ L
Sbjct: 95 NILRLYGYFH------DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T Y PE++ M
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM 208
Query: 242 H 242
H
Sbjct: 209 H 209
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T Y PE++ MH + D+
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 218 LGVLCYEFLVGKPPFE 233
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 13/182 (7%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 11 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 70 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA--RPTENEMTGYVATRWYRAPEIMLNW 240
Y HS +IHRD+KP N+ + ELKI DFG + P+ T T Y PE++
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPEMIEGR 182
Query: 241 MH 242
MH
Sbjct: 183 MH 184
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA--RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIH 310
+D+KP N+ + ELKI DFG + P+ T T Y PE++ MH + D+
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 311 QLNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 192 SLGVLCYEFLVGKPPFE 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 12 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH D VY++ +G + + K + + ++ L
Sbjct: 71 NILRLYGYFH------DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI +FG + + T T Y PE++ M
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 242 H 242
H
Sbjct: 185 H 185
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI +FG + + T T Y PE++ MH + D+
Sbjct: 134 RDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 193
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 194 LGVLCYEFLVGKPPFE 209
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQ 171
E+ +L +H N++ LLD F+ L ++ G ++ ++ + L++ +Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLW-----ILIEFCAGGAVDAVMLELERPLTESQIQ 138
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP---TENEMTGYVAT 228
+ Q L L Y+H IIHRDLK NI D ++K+ DFG++ T ++ T
Sbjct: 139 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGT 198
Query: 229 RWYRAPEIML 238
++ APE+++
Sbjct: 199 PYWMAPEVVM 208
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP---TENEMTGYVATRWYRA 294
LN++H N+ +DLK NI D ++K+ DFG++ T ++ T ++ A
Sbjct: 148 LNYLHDNK----IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMA 203
Query: 295 PEIML 299
PE+++
Sbjct: 204 PEVVM 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 13 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 72 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI +FG + + T T Y PE++ M
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 242 H 242
H
Sbjct: 186 H 186
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI +FG + + T T Y PE++ MH + D+
Sbjct: 135 RDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 195 LGVLCYEFLVGKPPFE 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 12 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 71 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T Y PE++ M
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 242 H 242
H
Sbjct: 185 H 185
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T Y PE++ MH + D+
Sbjct: 134 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 193
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 194 LGVLCYEFLVGKPPFE 209
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQ 171
E+ +L +H N++ LLD F+ L ++ G ++ ++ + L++ +Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLW-----ILIEFCAGGAVDAVMLELERPLTESQIQ 138
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT---GYVAT 228
+ Q L L Y+H IIHRDLK NI D ++K+ DFG++ + ++ T
Sbjct: 139 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGT 198
Query: 229 RWYRAPEIML 238
++ APE+++
Sbjct: 199 PYWMAPEVVM 208
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMT---GYVATRWYRA 294
LN++H N+ +DLK NI D ++K+ DFG++ + ++ T ++ A
Sbjct: 148 LNYLHDNK----IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMA 203
Query: 295 PEIML 299
PE+++
Sbjct: 204 PEVVM 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 10 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 69 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T Y PE++ M
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 242 H 242
H
Sbjct: 183 H 183
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T Y PE++ MH + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 192 LGVLCYEFLVGKPPFE 207
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+A+D +G +VAI+++ Q + E+ +++ + N++ LD + + D
Sbjct: 39 TAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDE 92
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
V M +L G L +++ + + + + + L+ L+++HS +IHR++K NI +
Sbjct: 93 LWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLG 151
Query: 203 EDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
D +K+ DFG P +++ + V T ++ APE++
Sbjct: 152 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 13 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 72 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T Y PE++ M
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 242 H 242
H
Sbjct: 186 H 186
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T Y PE++ MH + D+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 195 LGVLCYEFLVGKPPFE 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + +A+K + + + A + RE+ + H+ H
Sbjct: 7 FEIGRPLGKGKFGNVYL-AREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 66 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE++ M
Sbjct: 120 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 242 H 242
H
Sbjct: 180 H 180
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE++ MH + D+
Sbjct: 129 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 188
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 189 LGVLCYEFLVGKPPFE 204
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
+ K +F ++ + +G + A K I SA ++ RE R+ + + H N++ L
Sbjct: 12 IGKGAFSVV-RRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRL-- 68
Query: 132 VFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI 189
H + F Y+V L+ G +I+ + S+ + QIL + + H G+
Sbjct: 69 --HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 124
Query: 190 IHRDLKPSNIAVNEDCE---LKILDFGLARPTENEMT---GYVATRWYRAPEIM 237
+HRDLKP N+ + C+ +K+ DFGLA + + G+ T Y +PE++
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCE---LKILDFGLARPTENEMT---GYVA 288
+I+ +H +Q GV +DLKP N+ + C+ +K+ DFGLA + + G+
Sbjct: 111 QILEAVLHCHQMGV--VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 289 TRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLT 346
T Y +PE++ + DI +I+ +L G PP + K +
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP------FWDEDQHKLYQQIKAGA 222
Query: 347 KKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
+ P+A KRITA +AL HP++ Q S
Sbjct: 223 YDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRS 268
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 72 LSKESFDLIFSSALDSVSGVK-VAIKKIARPFQSAVHAKRTYRE------LRMLKHM--- 121
L + FDL+ S + V V +KK R + V K + ++ KH+
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 122 --NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQIL 178
NH ++GL F + + L +++ ++ G DL ++ R +KL ++H +F +I
Sbjct: 66 ASNHPFLVGLHSCFQTESRL-----FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 120
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA----RPTENEMTGYVATRWYRAP 234
L Y+H GII+RDLK N+ ++ + +K+ D+G+ RP + + + T Y AP
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFCGTPNYIAP 179
Query: 235 EIM 237
EI+
Sbjct: 180 EIL 182
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 228 TRWYRAP-EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA----RPTENE 282
R+Y A + LN++H + G+ ++DLK N+ ++ + +K+ D+G+ RP +
Sbjct: 112 ARFYSAEISLALNYLH--ERGI--IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT- 166
Query: 283 MTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM--EMLGTPPAEFMAKISSDS 334
+ + T Y APEI+ + D L ++M M G P + + SSD+
Sbjct: 167 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG--SSDN 218
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
L K +F ++ + + A K I SA ++ RE R+ + + H N++ L
Sbjct: 39 LGKGAFSVV-RRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL-- 95
Query: 132 VFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI 189
H + F Y+V L+ G +I+ + S+ ++QIL + +IH I
Sbjct: 96 --HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDI 151
Query: 190 IHRDLKPSNIAVNEDCE---LKILDFGLARPTENEMT---GYVATRWYRAPEIM 237
+HRDLKP N+ + C+ +K+ DFGLA + E G+ T Y +PE++
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVL 205
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Query: 253 QDLKPSNIAVNEDCE---LKILDFGLARPTENEMT---GYVATRWYRAPEIMLNWMHYNQ 306
+DLKP N+ + C+ +K+ DFGLA + E G+ T Y +PE++ +
Sbjct: 154 RDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKP 213
Query: 307 TDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXX 364
DI +I+ +L G PP + K + + P+A
Sbjct: 214 VDIWACGVILYILLVGYPP------FWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 267
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYS 392
KRITA+QAL HP++ Q S
Sbjct: 268 INQMLTINPAKRITADQALKHPWVCQRS 295
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIAR-PFQSAVHAKRTYRELRMLKHMNHENV 126
+G TL +F + ++G KVA+K + R +S + RE++ LK H ++
Sbjct: 20 LGDTLGVGTFGKV-KVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 127 IGLLDVFHSNTCLADFKNVYMV-THLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYI 184
I L V + + +++MV ++ G +L + I + +L + + L QIL G+ Y
Sbjct: 79 IKLYQVISTPS------DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 185 HSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE--MTGYVATRWYRAPEIM 237
H ++HRDLKP N+ ++ KI DFGL+ + + + Y APE++
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVI 187
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 21/165 (12%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE--MTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLKP N+ ++ KI DFGL+ + + + Y APE++ ++ + DI
Sbjct: 140 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDI 199
Query: 310 HQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF---KGANPQAIXX 364
+I+ L GT P + + +P L KK +F + NP I
Sbjct: 200 WSSGVILYALLCGTLPFD-------------DDHVPTLFKKICDGIFYTPQYLNPSVISL 246
Query: 365 XXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSFED 409
KR T + H + Q P P Y + D
Sbjct: 247 LKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMID 291
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 136 NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
+ L D K ++ +L G ++L L + + ++ +IL+GL Y+HS IHRD+K
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 196 PSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
+N+ ++E E+K+ DFG+A T+ + +V T ++ APE++
Sbjct: 147 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 191
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +N+ ++E E+K+ DFG+A T+ + +V T ++ APE++ + ++ DI
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 202
Query: 310 HQLNLIMEML--GTPP 323
L + L G PP
Sbjct: 203 WSLGITAIELARGEPP 218
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 13 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 72 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T Y PE++ M
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 242 H 242
H
Sbjct: 186 H 186
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T Y PE++ MH + D+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 195 LGVLCYEFLVGKPPFE 210
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR---------------- 216
L QIL L YIHS GIIHR+LKP NI ++E +KI DFGLA+
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 217 -PTENEMTGYVATRWYRAPEIMLNWMHYNQ 245
+ + +T + T Y A E++ HYN+
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNE 210
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 18/82 (21%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR-----------------PTENEMTGYVATRWYRAP 295
++LKP NI ++E +KI DFGLA+ + + +T + T Y A
Sbjct: 140 RNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVAT 199
Query: 296 EIMLNWMHYNQT-DIHQLNLIM 316
E++ HYN+ D + L +I
Sbjct: 200 EVLDGTGHYNEKIDXYSLGIIF 221
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 139 LADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSN 198
L D K ++ +L G ++L L + + ++ +IL+GL Y+HS IHRD+K +N
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAAN 154
Query: 199 IAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
+ ++E E+K+ DFG+A T+ + +V T ++ APE++
Sbjct: 155 VLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 196
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +N+ ++E E+K+ DFG+A T+ + +V T ++ APE++ + ++ DI
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 207
Query: 310 HQLNLIMEML--GTPP 323
L + L G PP
Sbjct: 208 WSLGITAIELARGEPP 223
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 136 NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
+ L D K ++ +L G ++L L + + ++ +IL+GL Y+HS IHRD+K
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 196 PSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
+N+ ++E E+K+ DFG+A T+ + +V T ++ APE++
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 176
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +N+ ++E E+K+ DFG+A T+ + +V T ++ APE++ + ++ DI
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 310 HQLNLIMEML--GTPP 323
L + L G PP
Sbjct: 188 WSLGITAIELARGEPP 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 136 NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195
+ L D K ++ +L G ++L L + + ++ +IL+GL Y+HS IHRD+K
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 196 PSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
+N+ ++E E+K+ DFG+A T+ + +V T ++ APE++
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 176
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +N+ ++E E+K+ DFG+A T+ + +V T ++ APE++ + ++ DI
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 310 HQLNLIMEML--GTPP 323
L + L G PP
Sbjct: 188 WSLGITAIELARGEPP 203
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQ 171
E+ +L +H N++ LLD F+ L ++ G ++ ++ + L++ +Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLW-----ILIEFCAGGAVDAVMLELERPLTESQIQ 138
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT---GYVAT 228
+ Q L L Y+H IIHRDLK NI D ++K+ DFG++ + ++ T
Sbjct: 139 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGT 198
Query: 229 RWYRAPEIML 238
++ APE+++
Sbjct: 199 PYWMAPEVVM 208
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMT---GYVATRWYRA 294
LN++H N+ +DLK NI D ++K+ DFG++ + ++ T ++ A
Sbjct: 148 LNYLHDNK----IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMA 203
Query: 295 PEIML 299
PE+++
Sbjct: 204 PEVVM 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 17/160 (10%)
Query: 86 DSVSGVKVAIKKI-ARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144
++ +G+K+A K I R + K E+ ++ ++H N+I L D F S +
Sbjct: 110 ETATGLKLAAKIIKTRGMKDKEEVKN---EISVMNQLDHANLIQLYDAFESKNDI----- 161
Query: 145 VYMVTHLMGADLNN--ILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI-AV 201
V ++ ++ G +L + I + L++ + QI G++++H I+H DLKP NI V
Sbjct: 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCV 221
Query: 202 NEDC-ELKILDFGLAR---PTENEMTGYVATRWYRAPEIM 237
N D ++KI+DFGLAR P E + T + APE++
Sbjct: 222 NRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVV 260
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 254 DLKPSNI-AVNEDC-ELKILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQTD 308
DLKP NI VN D ++KI+DFGLAR P E + T + APE++ TD
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVSFPTD 270
Query: 309 IHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFR-QVFKGANPQAIXXXXX 367
+ + +I ML + + F+ D+ + +N++ L + D + F+ + +A
Sbjct: 271 MWSVGVIAYMLLSGLSPFLG----DNDAETLNNI-LACRWDLEDEEFQDISEEAKEFISK 325
Query: 368 XXXXXXXKRITAEQALAHPYLSQY 391
RI+A +AL HP+LS +
Sbjct: 326 LLIKEKSWRISASEALKHPWLSDH 349
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN 125
I++ + + +F ++ + + VAIK+I +S K ELR L +NH N
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWRAKD---VAIKQI----ESESERKAFIVELRQLSRVNHPN 63
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK----LSDDHVQFLVYQILRGL 181
++ L + CL ++ + G L N+L + + H Q +G+
Sbjct: 64 IVKLYGACLNPVCL-------VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 182 KYIHS---AGIIHRDLKPSNIA-VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 237
Y+HS +IHRDLKP N+ V LKI DFG A + MT + + APE+
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVF 176
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 253 QDLKPSNIA-VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+DLKP N+ V LKI DFG A + MT + + APE+ + + D+
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 189
Query: 312 LNLIM----------EMLGTPPAEFMAKISSDSARKYINSLP 343
+I+ + +G P M + + + I +LP
Sbjct: 190 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP 231
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 71 TLSKESFDLIFS--SALDSVSGVKVAIK--KIARPFQSAVHAKRTYRELRMLKHMNHENV 126
L K + +F + +G A+K K A ++A T E +L+ + H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYIH 185
+ L+ F + L ++ +L G +L + R +D F + +I L ++H
Sbjct: 84 VDLIYAFQTGGKL-----YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT---GYVATRWYRAPEIMLNWMH 242
GII+RDLKP NI +N +K+ DFGL + + ++ T + T Y APEI++ H
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMT--- 284
T + EI + H +Q G+ ++DLKP NI +N +K+ DFGL + + ++ T
Sbjct: 122 TACFYLAEISMALGHLHQKGI--IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP--AEFMAKISSDSARKYIN 340
+ T Y APEI++ H D L +M +ML G PP E K + +N
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 341 SLPLLTKK 348
P LT++
Sbjct: 240 LPPYLTQE 247
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 71 TLSKESFDLIFS--SALDSVSGVKVAIK--KIARPFQSAVHAKRTYRELRMLKHMNHENV 126
L K + +F + +G A+K K A ++A T E +L+ + H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYIH 185
+ L+ F + L ++ +L G +L + R +D F + +I L ++H
Sbjct: 84 VDLIYAFQTGGKL-----YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT---GYVATRWYRAPEIMLNWMH 242
GII+RDLKP NI +N +K+ DFGL + + ++ T + T Y APEI++ H
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMT--- 284
T + EI + H +Q G+ ++DLKP NI +N +K+ DFGL + + ++ T
Sbjct: 122 TACFYLAEISMALGHLHQKGI--IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP--AEFMAKISSDSARKYIN 340
+ T Y APEI++ H D L +M +ML G PP E K + +N
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 341 SLPLLTKK 348
P LT++
Sbjct: 240 LPPYLTQE 247
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 40/250 (16%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA--DFKNVY 146
+G +VAIK+ + S + +R E++++K +NH NV+ +V LA D +
Sbjct: 38 TGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96
Query: 147 MVTHLMGADL----NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
M + G DL N L + ++ L+ I L+Y+H IIHRDLKP NI +
Sbjct: 97 M-EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 155
Query: 203 EDCEL---KILDFGLARPTENE--MTGYVATRWYRAPEIM--------LNWMHYNQ---- 245
+ KI+D G A+ + T +V T Y APE++ +++ +
Sbjct: 156 PGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215
Query: 246 --TGVPFYFQDLKP------------SNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
TG + + +P +I V +D + F PT N ++G +A +
Sbjct: 216 CITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV-KFSSVLPTPNHLSGILAGKL 274
Query: 292 YRAPEIMLNW 301
R + ML W
Sbjct: 275 ERWLQCMLMW 284
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 40/250 (16%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA--DFKNVY 146
+G +VAIK+ + S + +R E++++K +NH NV+ +V LA D +
Sbjct: 39 TGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 97
Query: 147 MVTHLMGADL----NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
M + G DL N L + ++ L+ I L+Y+H IIHRDLKP NI +
Sbjct: 98 M-EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 156
Query: 203 EDCEL---KILDFGLARPTENE--MTGYVATRWYRAPEIM--------LNWMHYNQ---- 245
+ KI+D G A+ + T +V T Y APE++ +++ +
Sbjct: 157 PGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 216
Query: 246 --TGVPFYFQDLKP------------SNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
TG + + +P +I V +D + F PT N ++G +A +
Sbjct: 217 CITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV-KFSSVLPTPNHLSGILAGKL 275
Query: 292 YRAPEIMLNW 301
R + ML W
Sbjct: 276 ERWLQCMLMW 285
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 46 PSRRLHDHFNQPYSEIC-----RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIAR 100
P R H+ F + R +D + + S ++ + + S SG VA+KK+
Sbjct: 6 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRS-SGKLVAVKKMD- 63
Query: 101 PFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNIL 160
+ + + E+ +++ HENV+ + N+ L + ++ L G L +I+
Sbjct: 64 -LRKQQRRELLFNEVVIMRDYQHENVVEMY-----NSYLVGDELWVVMEFLEGGALTDIV 117
Query: 161 RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220
+++++ + + +L+ L +H+ G+IHRD+K +I + D +K+ DFG
Sbjct: 118 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 177
Query: 221 EM---TGYVATRWYRAPEIM 237
E+ V T ++ APE++
Sbjct: 178 EVPRRKXLVGTPYWMAPELI 197
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 26/154 (16%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +I + D +K+ DFG E+ V T ++ APE++ + + DI
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 208
Query: 310 HQLN-LIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFR-------QVFKGANPQ 360
L +++EM+ G PP Y N PL K R + +P
Sbjct: 209 WSLGIMVIEMVDGEPP--------------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 254
Query: 361 AIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+R TA + L HP+L++ P
Sbjct: 255 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 288
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN 125
I++ + + +F ++ + + VAIK+I +S K ELR L +NH N
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWRAKD---VAIKQI----ESESERKAFIVELRQLSRVNHPN 62
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK----LSDDHVQFLVYQILRGL 181
++ L + CL ++ + G L N+L + + H Q +G+
Sbjct: 63 IVKLYGACLNPVCL-------VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 182 KYIHS---AGIIHRDLKPSNIA-VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 237
Y+HS +IHRDLKP N+ V LKI DFG A + MT + + APE+
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVF 175
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 253 QDLKPSNIA-VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+DLKP N+ V LKI DFG A + MT + + APE+ + + D+
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188
Query: 312 LNLIM----------EMLGTPPAEFMAKISSDSARKYINSLP 343
+I+ + +G P M + + + I +LP
Sbjct: 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP 230
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 15 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHL--MGADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ +G + + K + + ++ L
Sbjct: 74 NILRLYGYFHDAT------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T T Y PE +
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 242 H 242
H
Sbjct: 188 H 188
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T T Y PE + H + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWS 196
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 197 LGVLCYEFLVGKPPFE 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 46 PSRRLHDHFNQPYSEIC-----RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIAR 100
P R H+ F + R +D + + S ++ + + S SG VA+KK+
Sbjct: 8 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRS-SGKLVAVKKMD- 65
Query: 101 PFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNIL 160
+ + + E+ +++ HENV+ + N+ L + ++ L G L +I+
Sbjct: 66 -LRKQQRRELLFNEVVIMRDYQHENVVEMY-----NSYLVGDELWVVMEFLEGGALTDIV 119
Query: 161 RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220
+++++ + + +L+ L +H+ G+IHRD+K +I + D +K+ DFG
Sbjct: 120 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 179
Query: 221 EM---TGYVATRWYRAPEIM 237
E+ V T ++ APE++
Sbjct: 180 EVPRRKXLVGTPYWMAPELI 199
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 26/154 (16%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +I + D +K+ DFG E+ V T ++ APE++ + + DI
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 210
Query: 310 HQLN-LIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFR-------QVFKGANPQ 360
L +++EM+ G PP Y N PL K R + +P
Sbjct: 211 WSLGIMVIEMVDGEPP--------------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 256
Query: 361 AIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+R TA + L HP+L++ P
Sbjct: 257 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 290
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQF 172
+E ++ + H N+I L V CL + ++ G LN +L +++ D +
Sbjct: 55 QEAKLFAMLKHPNIIALRGV-----CLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVN 109
Query: 173 LVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCE--------LKILDFGLARP--TE 219
QI RG+ Y+H IIHRDLK SNI + + E LKI DFGLAR
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169
Query: 220 NEMTGYVATRWYRAPEIM 237
+M+ A W APE++
Sbjct: 170 TKMSAAGAYAWM-APEVI 186
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
Query: 234 PEIMLNW-------MHY--NQTGVPFYFQDLKPSNIAVNEDCE--------LKILDFGLA 276
P+I++NW M+Y ++ VP +DLK SNI + + E LKI DFGLA
Sbjct: 104 PDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
Query: 277 RP--TENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEF 326
R +M+ A W APE++ M +D+ +++ L T F
Sbjct: 164 REWHRTTKMSAAGAYAWM-APEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 46 PSRRLHDHFNQPYSEIC-----RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIAR 100
P R H+ F + R +D + + S ++ + + S SG VA+KK+
Sbjct: 51 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRS-SGKLVAVKKMD- 108
Query: 101 PFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNIL 160
+ + + E+ +++ HENV+ + N+ L + ++ L G L +I+
Sbjct: 109 -LRKQQRRELLFNEVVIMRDYQHENVVEMY-----NSYLVGDELWVVMEFLEGGALTDIV 162
Query: 161 RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220
+++++ + + +L+ L +H+ G+IHRD+K +I + D +K+ DFG
Sbjct: 163 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222
Query: 221 EM---TGYVATRWYRAPEIM 237
E+ V T ++ APE++
Sbjct: 223 EVPRRKXLVGTPYWMAPELI 242
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 26/154 (16%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +I + D +K+ DFG E+ V T ++ APE++ + + DI
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 253
Query: 310 HQLN-LIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFR-------QVFKGANPQ 360
L +++EM+ G PP Y N PL K R + +P
Sbjct: 254 WSLGIMVIEMVDGEPP--------------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 299
Query: 361 AIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+R TA + L HP+L++ P
Sbjct: 300 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 333
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVI 127
+G + + +F +FS L + + + VA+K + AK +E R+LK +H N++
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTL-VAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIV 175
Query: 128 GLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYI 184
L+ V + +Y+V L+ G D LRT+ +L + +V G++Y+
Sbjct: 176 RLIGVCTQK------QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 185 HSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG------YVATRWYRAPEIML 238
S IHRDL N V E LKI DFG++R + + V +W APE L
Sbjct: 230 ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT-APE-AL 287
Query: 239 NWMHYN 244
N+ Y+
Sbjct: 288 NYGRYS 293
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTG------YVATRWYRAPEIMLNWMHY-N 305
+DL N V E LKI DFG++R + + V +W APE LN+ Y +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT-APE-ALNYGRYSS 294
Query: 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN 340
++D+ +++ + A +S+ R+++
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE 329
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 67 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 218
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG VA+KK+ + + + E+ +++ HENV+ + N+ L + ++
Sbjct: 175 SGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMY-----NSYLVGDELWVVM 227
Query: 149 THLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
L G L +I+ +++++ + + +L+ L +H+ G+IHRD+K +I + D +K
Sbjct: 228 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 287
Query: 209 ILDFGLARPTENEM---TGYVATRWYRAPEIM 237
+ DFG E+ V T ++ APE++
Sbjct: 288 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 319
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 26/154 (16%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +I + D +K+ DFG E+ V T ++ APE++ + + DI
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 330
Query: 310 HQLN-LIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFR-------QVFKGANPQ 360
L +++EM+ G PP Y N PL K R + +P
Sbjct: 331 WSLGIMVIEMVDGEPP--------------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 376
Query: 361 AIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+R TA + L HP+L++ P
Sbjct: 377 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 410
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG VA+KK+ + + + E+ +++ HENV+ + N+ L + ++
Sbjct: 44 SGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMY-----NSYLVGDELWVVM 96
Query: 149 THLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
L G L +I+ +++++ + + +L+ L +H+ G+IHRD+K +I + D +K
Sbjct: 97 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 156
Query: 209 ILDFGLARPTENEM---TGYVATRWYRAPEIM 237
+ DFG E+ V T ++ APE++
Sbjct: 157 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 188
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 26/154 (16%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +I + D +K+ DFG E+ V T ++ APE++ + + DI
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 199
Query: 310 HQLN-LIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFR-------QVFKGANPQ 360
L +++EM+ G PP Y N PL K R + +P
Sbjct: 200 WSLGIMVIEMVDGEPP--------------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 245
Query: 361 AIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+R TA + L HP+L++ P
Sbjct: 246 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 67 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 218
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148
SG VA+KK+ + + + E+ +++ HENV+ + N+ L + ++
Sbjct: 48 SGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMY-----NSYLVGDELWVVM 100
Query: 149 THLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
L G L +I+ +++++ + + +L+ L +H+ G+IHRD+K +I + D +K
Sbjct: 101 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 160
Query: 209 ILDFGLARPTENEM---TGYVATRWYRAPEIM 237
+ DFG E+ V T ++ APE++
Sbjct: 161 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 192
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 26/154 (16%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +I + D +K+ DFG E+ V T ++ APE++ + + DI
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 203
Query: 310 HQLN-LIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFR-------QVFKGANPQ 360
L +++EM+ G PP Y N PL K R + +P
Sbjct: 204 WSLGIMVIEMVDGEPP--------------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 249
Query: 361 AIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
+R TA + L HP+L++ P
Sbjct: 250 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 283
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 67 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 218
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 67 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 67 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 218
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 86 DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145
D ++ VA+K I R A + RE+ + + H N++ +V + T LA
Sbjct: 41 DKLTKELVAVKYIER---GAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA----- 92
Query: 146 YMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
++ + G +L I + S+D +F Q+L G+ Y HS I HRDLK N ++
Sbjct: 93 IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS 152
Query: 205 --CELKILDFGLARPT--ENEMTGYVATRWYRAPEIML 238
LKI DFG ++ + ++ V T Y APE++L
Sbjct: 153 PAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 190
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 11/181 (6%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHE 124
+IG L K F ++ A + S +A+K + + + A + RE+ + H+ H
Sbjct: 15 FEIGRPLGKGKFGNVYL-AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLK 182
N++ L FH T VY++ G + + K + + ++ L
Sbjct: 74 NILRLYGYFHDAT------RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWM 241
Y HS +IHRD+KP N+ + ELKI DFG + + T Y PE++ M
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 242 H 242
H
Sbjct: 188 H 188
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
+D+KP N+ + ELKI DFG + + T Y PE++ MH + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 312 LNLIME--MLGTPPAE 325
L ++ ++G PP E
Sbjct: 197 LGVLCYEFLVGKPPFE 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 34/194 (17%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 68
Query: 120 HMNHENVIGLLDV-----------FHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDD 168
+ HE ++ L V + S CL DF + ++ LR +L D
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDF---------LKGEMGKYLRLPQLVD- 118
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVA 227
+ QI G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T
Sbjct: 119 ----MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 228 TRW---YRAPEIML 238
++ + APE L
Sbjct: 175 AKFPIKWTAPEAAL 188
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 45/204 (22%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN- 125
+I TL + +F + G VA+K I + A R+ E+++L+H+N +
Sbjct: 17 EIVDTLGEGAFGKVVECIDHKAGGRHVAVK-IVKNVDRYCEAARS--EIQVLEHLNTTDP 73
Query: 126 -----VIGLLDVF--HSNTCLADFKNVYMVTHLMGADLNNILRTQKL---SDDHVQFLVY 175
+ +L+ F H + C+ V L+G + ++ DH++ + Y
Sbjct: 74 NSTFRCVQMLEWFEHHGHICI--------VFELLGLSTYDFIKENGFLPFRLDHIRKMAY 125
Query: 176 QILRGLKYIHSAGIIHRDLKPSNI---------------------AVNEDCELKILDFGL 214
QI + + ++HS + H DLKP NI +N D +K++DFG
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD--IKVVDFGS 183
Query: 215 ARPTENEMTGYVATRWYRAPEIML 238
A + + V+TR YRAPE++L
Sbjct: 184 ATYDDEHHSTLVSTRHYRAPEVIL 207
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 136 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 190
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 191 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 251 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 227 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 285
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 286 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 323
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 65 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 216
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 34/194 (17%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 68
Query: 120 HMNHENVIGLLDV-----------FHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDD 168
+ HE ++ L V + S CL DF + ++ LR +L D
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDF---------LKGEMGKYLRLPQLVD- 118
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVA 227
+ QI G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T
Sbjct: 119 ----MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 228 TRW---YRAPEIML 238
++ + APE L
Sbjct: 175 AKFPIKWTAPEAAL 188
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 67 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 218
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---------- 162
E+ M+K + H+N+I LL C D +V + +L L+
Sbjct: 83 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSF 137
Query: 163 -------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
++LS + YQ+ RG++Y+ S IHRDL N+ V ED +KI DFGLA
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 216 R------PTENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R + G + +W APE + + ++ +Q+ V
Sbjct: 198 RDIHHIDXXKKTTNGRLPVKWM-APEALFDRIYTHQSDV 235
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR------PTENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V ED +KI DFGLAR + G + +W APE + + ++ +Q
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWM-APEALFDRIYTHQ 232
Query: 307 TDIHQLNL----IMEMLGTP----PAEFMAKISSDSAR 336
+D+ + I + G+P P E + K+ + R
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVI 127
+G + + +F +FS L + VA+K + AK +E R+LK +H N++
Sbjct: 118 LGEQIGRGNFGEVFSGRLRA-DNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIV 175
Query: 128 GLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYI 184
L+ V + +Y+V L+ G D LRT+ +L + +V G++Y+
Sbjct: 176 RLIGVCTQK------QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 185 HSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG------YVATRWYRAPEIML 238
S IHRDL N V E LKI DFG++R + + V +W APE L
Sbjct: 230 ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-TAPE-AL 287
Query: 239 NWMHYN 244
N+ Y+
Sbjct: 288 NYGRYS 293
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTG------YVATRWYRAPEIMLNWMHY-N 305
+DL N V E LKI DFG++R + + V +W APE LN+ Y +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-TAPE-ALNYGRYSS 294
Query: 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN 340
++D+ +++ + A +S+ R+++
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE 329
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 67 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 218
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 90 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 216 RPT------ENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R +N G + +W APE + + ++ +Q+ V
Sbjct: 205 RDINNIDYYKNTTNGRLPVKWM-APEALFDRVYTHQSDV 242
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR +N G + +W APE + + ++ +Q
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWM-APEALFDRVYTHQ 239
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---------- 162
E+ M+K + H+N+I LL C D +V + +L L+
Sbjct: 75 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 129
Query: 163 -------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
++LS + YQ+ RG++Y+ S IHRDL N+ V ED +KI DFGLA
Sbjct: 130 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
Query: 216 RPT------ENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R + G + +W APE + + ++ +Q+ V
Sbjct: 190 RDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDV 227
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V ED +KI DFGLAR + G + +W APE + + ++ +Q
Sbjct: 166 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQ 224
Query: 307 TDIHQLNL----IMEMLGTP----PAEFMAKISSDSAR 336
+D+ + I + G+P P E + K+ + R
Sbjct: 225 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 262
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 90 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSY 144
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 242
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 239
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---------- 162
E+ M+K + H+N+I LL C D +V + +L L+
Sbjct: 76 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 130
Query: 163 -------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
++LS + YQ+ RG++Y+ S IHRDL N+ V ED +KI DFGLA
Sbjct: 131 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
Query: 216 RPT------ENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R + G + +W APE + + ++ +Q+ V
Sbjct: 191 RDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDV 228
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V ED +KI DFGLAR + G + +W APE + + ++ +Q
Sbjct: 167 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQ 225
Query: 307 TDIHQLNL----IMEMLGTP----PAEFMAKISSDSAR 336
+D+ + I + G+P P E + K+ + R
Sbjct: 226 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 263
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 147 MVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
++ +L G ++LR + + ++ +IL+GL Y+HS IHRD+K +N+ ++E +
Sbjct: 99 IMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD 158
Query: 207 LKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
+K+ DFG+A T+ + +V T ++ APE++
Sbjct: 159 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 192
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +N+ ++E ++K+ DFG+A T+ + +V T ++ APE++ + ++ DI
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 310 HQLNLIMEML--GTPP 323
L + L G PP
Sbjct: 204 WSLGITAIELAKGEPP 219
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 37/222 (16%)
Query: 57 PYSEICRGVIDIGPTLSKESFDLIFSSALDSV------SGVKVAIKKIARPFQSAVHAKR 110
P E R + +G L + +F + + + V VA+K + + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSD 86
Query: 111 TYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK----- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 87 LVSEMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 165 -------LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DF
Sbjct: 142 XSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 213 GLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
GLAR N G + +W APE + + ++ +Q+ V
Sbjct: 202 GLARDINNIDXXKKTTNGRLPVKWM-APEALFDRVYTHQSDV 242
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWM-APEALFDRVYTHQ 239
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---------- 162
E+ M+K + H+N+I LL C D +V + +L L+
Sbjct: 83 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSY 137
Query: 163 -------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
++LS + YQ+ RG++Y+ S IHRDL N+ V ED +KI DFGLA
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 216 RPT------ENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R + G + +W APE + + ++ +Q+ V
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDV 235
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V ED +KI DFGLAR + G + +W APE + + ++ +Q
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQ 232
Query: 307 TDIHQLNL----IMEMLGTP----PAEFMAKISSDSAR 336
+D+ + I + G+P P E + K+ + R
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 270
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 146 YMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
+++ +L G DL +I K F +I+ GL+++HS GI++RDLK NI +++D
Sbjct: 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 154
Query: 205 CELKILDFGLARPT---ENEMTGYVATRWYRAPEIMLNWMHYNQT 246
+KI DFG+ + + + + T Y APEI+L YN +
Sbjct: 155 GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKYNHS 198
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 231 YRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGYV 287
+ A EI+L + G+ ++DLK NI +++D +KI DFG+ + + + +
Sbjct: 122 FYAAEIILGLQFLHSKGI--VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC 179
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
T Y APEI+L + + D +++ EML G P
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---------- 162
E+ M+K + H+N+I LL C D +V + +L L+
Sbjct: 83 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 137
Query: 163 -------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
++LS + YQ+ RG++Y+ S IHRDL N+ V ED +KI DFGLA
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 216 RPT------ENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R + G + +W APE + + ++ +Q+ V
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDV 235
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V ED +KI DFGLAR + G + +W APE + + ++ +Q
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQ 232
Query: 307 TDIHQLNL----IMEMLGTP----PAEFMAKISSDSAR 336
+D+ + I + G+P P E + K+ + R
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 270
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 35 RLWTVYPASKLPSRRL-HDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKV 93
RL TV P SK ++ L D + EI R + + L + F ++ + + +V
Sbjct: 242 RLTTVCPTSKPQTQGLAKDAW-----EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RV 294
Query: 94 AIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG 153
AIK + +P + + +E +++K + HE ++ L V + +Y+VT M
Sbjct: 295 AIKTL-KP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-------EPIYIVTEYMS 344
Query: 154 ---------ADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
+ LR +L D + QI G+ Y+ +HRDL+ +NI V E+
Sbjct: 345 KGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVHRDLRAANILVGEN 399
Query: 205 CELKILDFGLARPTE-NEMTGYVATRW---YRAPEIML 238
K+ DFGLAR E NE T ++ + APE L
Sbjct: 400 LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 437
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 444 KSDVWSFGILLTELTT 459
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---------- 162
E+ M+K + H+N+I LL C D +V + +L L+
Sbjct: 72 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 126
Query: 163 -------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
++LS + YQ+ RG++Y+ S IHRDL N+ V ED +KI DFGLA
Sbjct: 127 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
Query: 216 RPT------ENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R + G + +W APE + + ++ +Q+ V
Sbjct: 187 RDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDV 224
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V ED +KI DFGLAR + G + +W APE + + ++ +Q
Sbjct: 163 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQ 221
Query: 307 TDIHQLNL----IMEMLGTP----PAEFMAKISSDSAR 336
+D+ + I + G+P P E + K+ + R
Sbjct: 222 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 259
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSXQEY 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 147 MVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
++ +L G ++L+ L + ++ ++ +IL+GL Y+HS IHRD+K +N+ ++E +
Sbjct: 95 IMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGD 154
Query: 207 LKILDFGLA---RPTENEMTGYVATRWYRAPEIM 237
+K+ DFG+A T+ + +V T ++ APE++
Sbjct: 155 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 188
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +N+ ++E ++K+ DFG+A T+ + +V T ++ APE++ + + DI
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 310 HQLNLIMEML--GTPP 323
L + L G PP
Sbjct: 200 WSLGITAIELAKGEPP 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 37/222 (16%)
Query: 57 PYSEICRGVIDIGPTLSKESFDLIFSSALDSV------SGVKVAIKKIARPFQSAVHAKR 110
P E R + +G L + +F + + + V VA+K + + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSD 86
Query: 111 TYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK----- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 87 LVSEMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 165 -------LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 213 GLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
GLAR N G + +W APE + + ++ +Q+ V
Sbjct: 202 GLARDINNIDXXKKTTNGRLPVKWM-APEALFDRVYTHQSDV 242
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWM-APEALFDRVYTHQ 239
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---------- 162
E+ M+K + H+N+I LL C D +V + +L L+
Sbjct: 68 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 122
Query: 163 -------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
++LS + YQ+ RG++Y+ S IHRDL N+ V ED +KI DFGLA
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 216 RPT------ENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R + G + +W APE + + ++ +Q+ V
Sbjct: 183 RDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDV 220
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V ED +KI DFGLAR + G + +W APE + + ++ +Q
Sbjct: 159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQ 217
Query: 307 TDIHQLNL----IMEMLGTP----PAEFMAKISSDSAR 336
+D+ + I + G+P P E + K+ + R
Sbjct: 218 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 255
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 146 YMVTHLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
+++ +L G DL +I K F +I+ GL+++HS GI++RDLK NI +++D
Sbjct: 96 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 155
Query: 205 CELKILDFGLARPT---ENEMTGYVATRWYRAPEIMLNWMHYNQT 246
+KI DFG+ + + + + T Y APEI+L YN +
Sbjct: 156 GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNHS 199
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 231 YRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGYV 287
+ A EI+L + G+ ++DLK NI +++D +KI DFG+ + + + +
Sbjct: 123 FYAAEIILGLQFLHSKGI--VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC 180
Query: 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
T Y APEI+L + + D +++ EML G P
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---------- 162
E+ M+K + H+N+I LL C D +V + +L L+
Sbjct: 83 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 137
Query: 163 -------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
++LS + YQ+ RG++Y+ S IHRDL N+ V ED +KI DFGLA
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 216 RPT------ENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R + G + +W APE + + ++ +Q+ V
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDV 235
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V ED +KI DFGLAR + G + +W APE + + ++ +Q
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQ 232
Query: 307 TDIHQLNL----IMEMLGTP----PAEFMAKISSDSAR 336
+D+ + I + G+P P E + K+ + R
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 270
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 79 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 133
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 134 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 194 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 231
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 170 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 228
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 229 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 266
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 35 RLWTVYPASKLPSRRLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVA 94
RL TV P SK ++ L + EI R + + L + F ++ + + +VA
Sbjct: 159 RLTTVCPTSKPQTQGLA----KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVA 212
Query: 95 IKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG- 153
IK + +P + + +E +++K + HE ++ L V + +Y+VT M
Sbjct: 213 IKTL-KP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-------EPIYIVTEYMSK 262
Query: 154 --------ADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
+ LR +L D + QI G+ Y+ +HRDL+ +NI V E+
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVHRDLRAANILVGENL 317
Query: 206 ELKILDFGLARPTE-NEMTGYVATRW---YRAPEIML 238
K+ DFGLAR E NE T ++ + APE L
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 86 DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145
D S VA+K I R + A + KR R L+H N++ +V + T LA +
Sbjct: 40 DKQSNELVAVKYIERGEKIAANVKREIINHRSLRH---PNIVRFKEVILTPTHLA----I 92
Query: 146 YMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED- 204
M G I + S+D +F Q++ G+ Y H+ + HRDLK N ++
Sbjct: 93 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP 152
Query: 205 -CELKILDFGLARPT--ENEMTGYVATRWYRAPEIML 238
LKI DFG ++ + ++ V T Y APE++L
Sbjct: 153 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + K +NHEN
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 66 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 217
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 35 RLWTVYPASKLPSRRLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVA 94
RL TV P SK ++ L + EI R + + L + F ++ + + +VA
Sbjct: 159 RLTTVCPTSKPQTQGLA----KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVA 212
Query: 95 IKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG- 153
IK + +P + + +E +++K + HE ++ L V + +Y+VT M
Sbjct: 213 IKTL-KP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-------EPIYIVTEYMSK 262
Query: 154 --------ADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
+ LR +L D + QI G+ Y+ +HRDL+ +NI V E+
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVHRDLRAANILVGENL 317
Query: 206 ELKILDFGLARPTE-NEMTGYVATRW---YRAPEIML 238
K+ DFGLAR E NE T ++ + APE L
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 77 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 131
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 132 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 192 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 229
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 168 RDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 226
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 227 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 264
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 82 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 136
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 137 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 197 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 234
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 173 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 231
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 232 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 269
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 90 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 242
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 239
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 38 TVYPASKLPSRRLHDHFNQPYSE---ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVA 94
++ P +LP F Q Y I RGV + + F+ + V+ +++
Sbjct: 76 SMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLS 135
Query: 95 IKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYMVTHLM- 152
P Q + T RE +L+ + H ++I L+D + S++ + ++V LM
Sbjct: 136 ------PEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM------FLVFDLMR 183
Query: 153 -GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILD 211
G + + LS+ + ++ +L + ++H+ I+HRDLKP NI ++++ ++++ D
Sbjct: 184 KGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSD 243
Query: 212 FGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTG 247
FG + E ++ T Y APEI+ M G
Sbjct: 244 FGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPG 281
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 36/158 (22%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWM------HY 304
+DLKP NI ++++ ++++ DFG + E ++ T Y APEI+ M +
Sbjct: 224 RDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYG 283
Query: 305 NQTDIHQLNLIMEML--GTPP-----AEFMAKISSDSARKYINSLPLL-----TKKDFRQ 352
+ D+ +I+ L G+PP M ++ + +Y S P T KD
Sbjct: 284 KEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG--QYQFSSPEWDDRSSTVKDLIS 341
Query: 353 VFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQ 390
+P+A R+TAEQAL HP+ +
Sbjct: 342 RLLQVDPEA--------------RLTAEQALQHPFFER 365
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 90 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSY 144
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 242
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 239
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---------- 162
E+ M+K + H+N+I LL C D +V + +L L+
Sbjct: 124 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 178
Query: 163 -------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
++LS + YQ+ RG++Y+ S IHRDL N+ V ED +KI DFGLA
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Query: 216 RPT------ENEMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R + G + +W APE + + ++ +Q+ V
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDV 276
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V ED +KI DFGLAR + G + +W APE + + ++ +Q
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQ 273
Query: 307 TDIHQLNL----IMEMLGTP----PAEFMAKISSDSAR 336
+D+ + I + G+P P E + K+ + R
Sbjct: 274 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 311
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSDDH 169
+E+++L+ + H+NVI L+DV ++ + + +YMV + +L + ++
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNE----EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQ 110
Query: 170 VQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
Q++ GL+Y+HS GI+H+D+KP N+ + LKI G+A
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 90 EMEMMKMIGKHKNIITLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 242
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 239
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + K +++ +V+G F + DF V + + L R + +++ ++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDD----DFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVAT 228
+ Q ++G++Y+H+ +IHRDLK N+ +N+D ++KI DFGLA T+ E G T
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKTLCGT 205
Query: 229 RWYRAPEIMLNWMH 242
Y APE++ H
Sbjct: 206 PNYIAPEVLCKKGH 219
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVATRWY 292
+ ++H N+ +DLK N+ +N+D ++KI DFGLA T+ E G T Y
Sbjct: 155 VQYLHNNRV----IHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKTLCGTPNY 208
Query: 293 RAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
APE++ H + DI L I+ L G PP E
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + K +++ +V+G F + DF V + + L R + +++ ++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDD----DFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVAT 228
+ Q ++G++Y+H+ +IHRDLK N+ +N+D ++KI DFGLA T+ E G T
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKXLCGT 205
Query: 229 RWYRAPEIMLNWMH 242
Y APE++ H
Sbjct: 206 PNYIAPEVLCKKGH 219
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVATRWY 292
+ ++H N+ +DLK N+ +N+D ++KI DFGLA T+ E G T Y
Sbjct: 155 VQYLHNNRV----IHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKXLCGTPNY 208
Query: 293 RAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
APE++ H + DI L I+ L G PP E
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + K +++ +V+G F + DF V + + L R + +++ ++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDD----DFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVAT 228
+ Q ++G++Y+H+ +IHRDLK N+ +N+D ++KI DFGLA T+ E G T
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKDLCGT 205
Query: 229 RWYRAPEIMLNWMH 242
Y APE++ H
Sbjct: 206 PNYIAPEVLCKKGH 219
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVATRWY 292
+ ++H N+ +DLK N+ +N+D ++KI DFGLA T+ E G T Y
Sbjct: 155 VQYLHNNRV----IHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKDLCGTPNY 208
Query: 293 RAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
APE++ H + DI L I+ L G PP E
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 111 TYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSD 167
T +E+ +L+ ++ H N+I L D + +NT ++V LM G + + LS+
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFF------FLVFDLMKKGELFDYLTEKVTLSE 123
Query: 168 DHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA---RPTENEMTG 224
+ ++ +L + +H I+HRDLKP NI +++D +K+ DFG + P E ++
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLRS 182
Query: 225 YVATRWYRAPEIMLNWMHYNQTG 247
T Y APEI+ M+ N G
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPG 205
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 69/158 (43%), Gaps = 34/158 (21%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYN---- 305
+DLKP NI +++D +K+ DFG + P E ++ T Y APEI+ M+ N
Sbjct: 148 RDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLRSVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 306 --QTDIHQLNLIMEML--GTPP---AEFMAKISSDSARKYINSLPLL-----TKKDFRQV 353
+ D+ +IM L G+PP + M + + Y P T KD
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 266
Query: 354 FKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQY 391
F PQ KR TAE+ALAHP+ QY
Sbjct: 267 FLVVQPQ--------------KRYTAEEALAHPFFQQY 290
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 35 RLWTVYPASKLPSRRLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVA 94
RL TV P SK ++ L + EI R + + L + F ++ + + +VA
Sbjct: 159 RLTTVCPTSKPQTQGLA----KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVA 212
Query: 95 IKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC--LADFKNVYMVTHLM 152
IK + +P + + +E +++K + HE ++ L V + ++ + + +
Sbjct: 213 IKTL-KP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFL 269
Query: 153 GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212
+ LR +L D + QI G+ Y+ +HRDL+ +NI V E+ K+ DF
Sbjct: 270 KGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 213 GLARPTE-NEMTGYVATRW---YRAPEIML 238
GLAR E NE T ++ + APE L
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
L K +F ++ + +G + A K I SA ++ RE R+ + + H N++ L
Sbjct: 12 LGKGAFSVV-RRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL-- 68
Query: 132 VFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI 189
H + F Y+V L+ G +I+ + S+ + QIL + + H GI
Sbjct: 69 --HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 190 IHRDLKPSNIAV---NEDCELKILDFGLARPTENEMT---GYVATRWYRAPEIM 237
+HRDLKP N+ + ++ +K+ DFGLA + + G+ T Y +PE++
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 36/159 (22%)
Query: 253 QDLKPSNIAV---NEDCELKILDFGLARPTENEMT---GYVATRWYRAPEIMLNWMHYNQ 306
+DLKP N+ + ++ +K+ DFGLA + + G+ T Y +PE++ +
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKP 186
Query: 307 TDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGA------- 357
D+ +I+ +L G PP D R Y +Q+ GA
Sbjct: 187 VDMWACGVILYILLVGYPPF-----WDEDQHRLY------------QQIKAGAYDFPSPE 229
Query: 358 ----NPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
P+A KRITA +AL HP++ Q S
Sbjct: 230 WDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRS 268
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFL 173
E+ + K +++ +V+G F + DF V + + L R + +++ ++
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDD----DFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 131
Query: 174 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVAT 228
+ Q ++G++Y+H+ +IHRDLK N+ +N+D ++KI DFGLA T+ E G T
Sbjct: 132 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKDLCGT 189
Query: 229 RWYRAPEIMLNWMH 242
Y APE++ H
Sbjct: 190 PNYIAPEVLCKKGH 203
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVATRWY 292
+ ++H N+ +DLK N+ +N+D ++KI DFGLA T+ E G T Y
Sbjct: 139 VQYLHNNRV----IHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKDLCGTPNY 192
Query: 293 RAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAE 325
APE++ H + DI L I+ L G PP E
Sbjct: 193 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 90 EMEMMKMIGKHKNIIHLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ +KI DFGLA
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 242
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ +KI DFGLAR N G + +W APE + + ++ +Q
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 239
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
L K +F ++ + +G + A K I SA ++ RE R+ + + H N++ L
Sbjct: 12 LGKGAFSVV-RRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL-- 68
Query: 132 VFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI 189
H + F Y+V L+ G +I+ + S+ + QIL + + H GI
Sbjct: 69 --HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 190 IHRDLKPSNIAV---NEDCELKILDFGLARPTENEMT---GYVATRWYRAPEIM 237
+HRDLKP N+ + ++ +K+ DFGLA + + G+ T Y +PE++
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 36/159 (22%)
Query: 253 QDLKPSNIAV---NEDCELKILDFGLARPTENEMT---GYVATRWYRAPEIMLNWMHYNQ 306
+DLKP N+ + ++ +K+ DFGLA + + G+ T Y +PE++ +
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKP 186
Query: 307 TDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGA------- 357
D+ +I+ +L G PP D R Y +Q+ GA
Sbjct: 187 VDMWACGVILYILLVGYPPF-----WDEDQHRLY------------QQIKAGAYDFPSPE 229
Query: 358 ----NPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
P+A KRITA +AL HP++ Q S
Sbjct: 230 WDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRS 268
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 114 ELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-------- 164
E+ M+K + H+N+I LL C D +V + +L LR ++
Sbjct: 90 EMEMMKMIGKHKNIINLL-----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 165 ----LSDDHVQF-----LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ ++ + F YQ+ RG++Y+ S IHRDL N+ V E+ ++I DFGLA
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
Query: 216 RPTEN------EMTGYVATRWYRAPEIMLNWMHYNQTGV 248
R N G + +W APE + + ++ +Q+ V
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDV 242
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTEN------EMTGYVATRWYRAPEIMLNWMHYNQ 306
+DL N+ V E+ ++I DFGLAR N G + +W APE + + ++ +Q
Sbjct: 181 RDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQ 239
Query: 307 TDIHQLNLIM----EMLGTP----PAEFMAKISSDSAR 336
+D+ ++M + G+P P E + K+ + R
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLD 131
L K +F ++ + ++G + A I SA ++ RE R+ + + H N++ L D
Sbjct: 19 LGKGAFSVV-RRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 132 VFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI 189
+++ + Y++ L+ G +I+ + S+ + QIL + + H G+
Sbjct: 78 ------SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 190 IHRDLKPSNIAVN---EDCELKILDFGLARPTENEMT---GYVATRWYRAPEIM 237
+HR+LKP N+ + + +K+ DFGLA E E G+ T Y +PE++
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 38/177 (21%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVN---EDCELKILDFGLARPTENEMT---GYVA 288
+I+ +H +Q GV ++LKP N+ + + +K+ DFGLA E E G+
Sbjct: 118 QILEAVLHCHQMGV--VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 175
Query: 289 TRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLT 346
T Y +PE++ + D+ +I+ +L G PP D R Y
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF-----WDEDQHRLY-------- 222
Query: 347 KKDFRQVFKGA-----------NPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
+Q+ GA P+A KRITA +AL HP++S S
Sbjct: 223 ----QQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRS 275
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-LSDD 168
R RE + +NH ++ + D + T + M ++ G L +I+ T+ ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM-EYVDGVTLRDIVHTEGPMTPK 116
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN------EM 222
++ + L + H GIIHRD+KP+NI ++ +K++DFG+AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 223 TGYVATRWYRAPE 235
+ T Y +PE
Sbjct: 177 AAVIGTAQYLSPE 189
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE MT A LN+ H N +D+KP+NI ++ +K++DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 278 PTEN------EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
+ + + T Y +PE ++D++ L ++ E+L G PP
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 51 HDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR 110
HDH Y ++ + K SF + A D VA+K + + H ++
Sbjct: 92 HDHVAYRY--------EVLKVIGKGSFGQVVK-AYDHKVHQHVALKMVRN--EKRFH-RQ 139
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSD 167
E+R+L+H+ ++ ++V H ++ M L+ +L +++ Q S
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSL 199
Query: 168 DHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE--LKILDFGLARPTENEMTGY 225
V+ + IL+ L +H IIH DLKP NI + + +K++DFG + +
Sbjct: 200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTX 259
Query: 226 VATRWYRAPEIMLN 239
+ +R+YRAPE++L
Sbjct: 260 IQSRFYRAPEVILG 273
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 254 DLKPSNIAVNEDCE--LKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
DLKP NI + + +K++DFG + + + +R+YRAPE++L + D+
Sbjct: 225 DLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWS 284
Query: 312 LNLIMEMLGT 321
L I+ L T
Sbjct: 285 LGCILAELLT 294
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 111 TYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSD 167
T +E+ +L+ ++ H N+I L D + +NT ++V LM G + + LS+
Sbjct: 57 TLKEVDILRKVSGHPNIIQLKDTYETNTFF------FLVFDLMKKGELFDYLTEKVTLSE 110
Query: 168 DHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA---RPTENEMTG 224
+ ++ +L + +H I+HRDLKP NI +++D +K+ DFG + P E ++
Sbjct: 111 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLRE 169
Query: 225 YVATRWYRAPEIMLNWMHYNQTG 247
T Y APEI+ M+ N G
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPG 192
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 69/158 (43%), Gaps = 34/158 (21%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYN---- 305
+DLKP NI +++D +K+ DFG + P E ++ T Y APEI+ M+ N
Sbjct: 135 RDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGY 193
Query: 306 --QTDIHQLNLIMEML--GTPP---AEFMAKISSDSARKYINSLPLL-----TKKDFRQV 353
+ D+ +IM L G+PP + M + + Y P T KD
Sbjct: 194 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 253
Query: 354 FKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQY 391
F PQ KR TAE+ALAHP+ QY
Sbjct: 254 FLVVQPQ--------------KRYTAEEALAHPFFQQY 277
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 111 TYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSD 167
T +E+ +L+ ++ H N+I L D + +NT ++V LM G + + LS+
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFF------FLVFDLMKKGELFDYLTEKVTLSE 123
Query: 168 DHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA---RPTENEMTG 224
+ ++ +L + +H I+HRDLKP NI +++D +K+ DFG + P E ++
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLRE 182
Query: 225 YVATRWYRAPEIMLNWMHYNQTG 247
T Y APEI+ M+ N G
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPG 205
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 69/158 (43%), Gaps = 34/158 (21%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLNWMHYN---- 305
+DLKP NI +++D +K+ DFG + P E ++ T Y APEI+ M+ N
Sbjct: 148 RDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 306 --QTDIHQLNLIMEML--GTPP---AEFMAKISSDSARKYINSLPLL-----TKKDFRQV 353
+ D+ +IM L G+PP + M + + Y P T KD
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 266
Query: 354 FKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQY 391
F PQ KR TAE+ALAHP+ QY
Sbjct: 267 FLVVQPQ--------------KRYTAEEALAHPFFQQY 290
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-LSDD 168
R RE + +NH ++ + D + T + M ++ G L +I+ T+ ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM-EYVDGVTLRDIVHTEGPMTPK 116
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN------EM 222
++ + L + H GIIHRD+KP+NI ++ +K++DFG+AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 223 TGYVATRWYRAPE 235
+ T Y +PE
Sbjct: 177 AAVIGTAQYLSPE 189
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE MT A LN+ H N +D+KP+NI ++ +K++DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 278 PTEN------EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
+ + + T Y +PE ++D++ L ++ E+L G PP
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 68
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG---------ADLNNILRTQKLSDDHV 170
+ HE ++ L V +Y+VT M ++ LR +L D
Sbjct: 69 KLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--- 118
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATR 229
+ QI G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T +
Sbjct: 119 --MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 230 W---YRAPEIML 238
+ + APE L
Sbjct: 177 FPIKWTAPEAAL 188
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 57
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG---------ADLNNILRTQKLSDDHV 170
+ HE ++ L V +Y+VT M ++ LR +L D
Sbjct: 58 KLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--- 107
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATR 229
+ QI G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T +
Sbjct: 108 --MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 165
Query: 230 W---YRAPEIML 238
+ + APE L
Sbjct: 166 FPIKWTAPEAAL 177
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 184 KSDVWSFGILLTELTT 199
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 51 HDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR 110
HDH Y ++ + K SF + A D VA+K + + H ++
Sbjct: 92 HDHVAYRY--------EVLKVIGKGSFGQVVK-AYDHKVHQHVALKMVRN--EKRFH-RQ 139
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKL---SD 167
E+R+L+H+ ++ ++V H ++ M L+ +L +++ K S
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSL 199
Query: 168 DHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE--LKILDFGLARPTENEMTGY 225
V+ + IL+ L +H IIH DLKP NI + + +K++DFG + +
Sbjct: 200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTX 259
Query: 226 VATRWYRAPEIMLN 239
+ +R+YRAPE++L
Sbjct: 260 IQSRFYRAPEVILG 273
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 254 DLKPSNIAVNEDCE--LKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
DLKP NI + + +K++DFG + + + +R+YRAPE++L + D+
Sbjct: 225 DLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWS 284
Query: 312 LNLIMEMLGT 321
L I+ L T
Sbjct: 285 LGCILAELLT 294
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-LSDD 168
R RE + +NH ++ + D + T + M ++ G L +I+ T+ ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM-EYVDGVTLRDIVHTEGPMTPK 116
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN------EM 222
++ + L + H GIIHRD+KP+NI ++ +K++DFG+AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 223 TGYVATRWYRAPE 235
+ T Y +PE
Sbjct: 177 AAVIGTAQYLSPE 189
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE MT A LN+ H N +D+KP+NI ++ +K++DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 278 PTEN------EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
+ + + T Y +PE ++D++ L ++ E+L G PP
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 59
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG---------ADLNNILRTQKLSDDHV 170
+ HE ++ L V +Y+VT M ++ LR +L D
Sbjct: 60 KLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--- 109
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATR 229
+ QI G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T +
Sbjct: 110 --MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 167
Query: 230 W---YRAPEIML 238
+ + APE L
Sbjct: 168 FPIKWTAPEAAL 179
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 186 KSDVWSFGILLTELTT 201
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 13/177 (7%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
L + F +F+ + + + K + + + E ++L ++ ++ L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQ-----FLVYQILRGLKYIH 185
F + T L ++T + G D+ + + Q F QI+ GL+++H
Sbjct: 252 YAFETKTDL-----CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRWYRAPEIMLN 239
II+RDLKP N+ +++D ++I D GLA + + + GY T + APE++L
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRW 291
+I+ H +Q + ++DLKP N+ +++D ++I D GLA + + + GY T
Sbjct: 297 QIVSGLEHLHQRNI--IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 292 YRAPEIMLNWMHYNQTDIHQLNLIM-EMLGT 321
+ APE++L + D L + + EM+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQ-- 171
E ++L ++ ++ L F + T L ++T + G D+ + + Q
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-----CLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 172 ---FLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGY 225
F QI+ GL+++H II+RDLKP N+ +++D ++I D GLA + + + GY
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 226 VATRWYRAPEIMLN 239
T + APE++L
Sbjct: 350 AGTPGFMAPELLLG 363
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRW 291
+I+ H +Q + ++DLKP N+ +++D ++I D GLA + + + GY T
Sbjct: 297 QIVSGLEHLHQRNI--IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 292 YRAPEIMLNWMHYNQTDIHQLNLIM-EMLGT 321
+ APE++L + D L + + EM+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADL-----NNILRTQKLSDD 168
E ++L ++ ++ L F + T L ++T + G D+ N +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-----CLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGY 225
F QI+ GL+++H II+RDLKP N+ +++D ++I D GLA + + + GY
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 226 VATRWYRAPEIMLN 239
T + APE++L
Sbjct: 350 AGTPGFMAPELLLG 363
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRW 291
+I+ H +Q + ++DLKP N+ +++D ++I D GLA + + + GY T
Sbjct: 297 QIVSGLEHLHQRNI--IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 292 YRAPEIMLNWMHYNQTDIHQLNLIM-EMLGT 321
+ APE++L + D L + + EM+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQ-- 171
E ++L ++ ++ L F + T L ++T + G D+ + + Q
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-----CLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 172 ---FLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGY 225
F QI+ GL+++H II+RDLKP N+ +++D ++I D GLA + + + GY
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 226 VATRWYRAPEIMLN 239
T + APE++L
Sbjct: 350 AGTPGFMAPELLLG 363
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA---RPTENEMTGYVATRW 291
+I+ H +Q + ++DLKP N+ +++D ++I D GLA + + + GY T
Sbjct: 297 QIVSGLEHLHQRNI--IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 292 YRAPEIMLNWMHYNQTDIHQLNLIM-EMLGT 321
+ APE++L + D L + + EM+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSA--VHAKRTY-------RELRMLKHMNHEN 125
E +DL+ + + V++A+ ++ + V KR +E+ + +NHEN
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIH 185
V+ F+ + + + +++ G + I + + Q +Q++ G+ Y+H
Sbjct: 67 VVK----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM 237
GI HRD+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLA-----RPTENEMTGYVATRWYRAPEIM-LN 300
G+ +D+KP N+ ++E LKI DFGLA E + T Y APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY 338
H D+ +++ + E SDS ++Y
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEY 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 65
Query: 120 HMNHENVIGLLDVFHSNTC--LADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQI 177
+ HE ++ L V + ++ N + + + LR +L D + QI
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD-----MSAQI 120
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRA 233
G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T ++ + A
Sbjct: 121 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTA 180
Query: 234 PEIML 238
PE L
Sbjct: 181 PEAAL 185
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 192 KSDVWSFGILLTELTT 207
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 68
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG---------ADLNNILRTQKLSDDHV 170
+ HE ++ L V +Y+VT M ++ LR +L D
Sbjct: 69 KIRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--- 118
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATR 229
+ QI G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T +
Sbjct: 119 --MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 230 W---YRAPEIML 238
+ + APE L
Sbjct: 177 FPIKWTAPEAAL 188
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 35 RLWTVYPASKLPSRRLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVA 94
RL V P SK ++ L + EI R + + L + F ++ + + +VA
Sbjct: 160 RLTNVCPTSKPQTQGLA----KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVA 213
Query: 95 IKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG- 153
IK + +P + A +E +++K + HE ++ L V + +Y+VT M
Sbjct: 214 IKTL-KPGNMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-------EPIYIVTEYMSK 263
Query: 154 --------ADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
++ LR +L D + QI G+ Y+ +HRDL+ +NI V E+
Sbjct: 264 GSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVHRDLRAANILVGENL 318
Query: 206 ELKILDFGLARPTE-NEMTGYVATRW---YRAPEIML 238
K+ DFGL R E NE T ++ + APE L
Sbjct: 319 VCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAAL 355
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGL R E NE T ++ + APE L
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 362 KSDVWSFGILLTELTT 377
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-LSDD 168
R RE + +NH ++ + D + T + M ++ G L +I+ T+ ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM-EYVDGVTLRDIVHTEGPMTPK 116
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN------EM 222
++ + L + H GIIHRD+KP+NI ++ +K++DFG+AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 223 TGYVATRWYRAPE 235
+ T Y +PE
Sbjct: 177 AAVIGTAQYLSPE 189
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE MT A LN+ H N +D+KP+NI ++ +K++DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANILISATNAVKVVDFGIAR 164
Query: 278 PTEN------EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
+ + + T Y +PE ++D++ L ++ E+L G PP
Sbjct: 165 AIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 109 KRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKL--- 165
++ E+R+L+H+ ++ ++V H ++ M L+ +L +++ K
Sbjct: 138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF 197
Query: 166 SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE--LKILDFGLARPTENEMT 223
S V+ + IL+ L +H IIH DLKP NI + + +K++DFG + +
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVY 257
Query: 224 GYVATRWYRAPEIMLN 239
+ +R+YRAPE++L
Sbjct: 258 XXIQSRFYRAPEVILG 273
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 254 DLKPSNIAVNEDCE--LKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311
DLKP NI + + +K++DFG + + + +R+YRAPE++L + D+
Sbjct: 225 DLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWS 284
Query: 312 LNLIMEMLGT 321
L I+ L T
Sbjct: 285 LGCILAELLT 294
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 80 IFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139
I A + SG +VA+K + + + + E+ +++ H NV+ + + L
Sbjct: 60 IVCLAREKHSGRQVAVKMM--DLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY-----L 112
Query: 140 ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
+ ++ L G L +I+ +L+++ + + +L+ L Y+H+ G+IHRD+K +I
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSI 172
Query: 200 AVNEDCELKILDFGLARPTENEM---TGYVATRWYRAPEIMLNWMHYNQTGV 248
+ D +K+ DFG ++ V T ++ APE++ ++ + +
Sbjct: 173 LLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDI 224
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 30/157 (19%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRAPEIMLNWMHYNQTDI 309
+D+K +I + D +K+ DFG ++ V T ++ APE++ ++ + DI
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDI 224
Query: 310 HQLN-LIMEML-GTPP------AEFMAKISSDSARKYINS---LPLLTKKDFRQVFKGAN 358
L +++EM+ G PP + M ++ K NS P+L +DF + +
Sbjct: 225 WSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVL--RDFLERMLVRD 282
Query: 359 PQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
PQ +R TA++ L HP+L Q P
Sbjct: 283 PQ--------------ERATAQELLDHPFLLQTGLPE 305
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 65
Query: 120 HMNHENVIGLLDVFHSNTC--LADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQI 177
+ HE ++ L V + ++ N + + + LR +L D + QI
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD-----MSAQI 120
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRA 233
G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T ++ + A
Sbjct: 121 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA 180
Query: 234 PEIML 238
PE L
Sbjct: 181 PEAAL 185
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 192 KSDVWSFGILLTELTT 207
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 68
Query: 120 HMNHENVIGLLDVFHSNTC--LADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQI 177
+ HE ++ L V + ++ + + + ++ LR +L D + QI
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQI 123
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRA 233
G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T ++ + A
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA 183
Query: 234 PEIML 238
PE L
Sbjct: 184 PEAAL 188
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 108 AKRTY-RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---Q 163
+RT+ +E+++++ + H NV+ + V + + L ++ ++ G L I+++ Q
Sbjct: 50 TQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN-----FITEYIKGGTLRGIIKSMDSQ 104
Query: 164 KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223
V F I G+ Y+HS IIHRDL N V E+ + + DFGLAR +E T
Sbjct: 105 YPWSQRVSF-AKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
Query: 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI-AVNEDCELKILDFGLA 276
R + P+ Y G P++ + P I + D ++ + FG+
Sbjct: 164 QPEGLRSLKKPD---RKKRYTVVGNPYW---MAPEMINGRSYDEKVDVFSFGIV 211
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-LSDD 168
R RE + +NH ++ + D + T + M ++ G L +I+ T+ ++
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM-EYVDGVTLRDIVHTEGPMTPK 133
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN------EM 222
++ + L + H GIIHRD+KP+NI ++ +K++DFG+AR + +
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 223 TGYVATRWYRAPE 235
+ T Y +PE
Sbjct: 194 AAVIGTAQYLSPE 206
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE MT A LN+ H N +D+KP+NI ++ +K++DFG+AR
Sbjct: 126 TEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIAR 181
Query: 278 PTEN------EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
+ + + T Y +PE ++D++ L ++ E+L G PP
Sbjct: 182 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 37/210 (17%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIK---KIARPFQSAVHAKRTYRELR 116
E R ++ G L +F + ++ +S V+I+ K+ + + + EL+
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 117 MLKHM-NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQF- 172
M+ + +HEN++ LL C + + DL N LR+ +K S+D +++
Sbjct: 101 MMTQLGSHENIVNLL-----GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155
Query: 173 ---------------------LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILD 211
YQ+ +G++++ +HRDL N+ V +KI D
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICD 215
Query: 212 FGLARPTENEMTGYVATRWYRAPEIMLNWM 241
FGLAR ++ + YV R P + WM
Sbjct: 216 FGLARDIMSD-SNYVVRGNARLP---VKWM 241
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 18/207 (8%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN--VY 146
+G +VA+K + +P H +E+ +L+++ HEN+ V + C D N
Sbjct: 49 TGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENI-----VKYKGICTEDGGNGIKL 102
Query: 147 MVTHLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHRDLKPSNIAVNED 204
++ L L L K + Q L Y QI +G+ Y+ S +HRDL N+ V +
Sbjct: 103 IMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE 162
Query: 205 CELKILDFGLARPTENEMTGYVATR-------WYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
++KI DFGL + E + WY APE ++ Y + V + L
Sbjct: 163 HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHE 221
Query: 258 SNIAVNEDCELKILDFGLARPTENEMT 284
+ D L + PT +MT
Sbjct: 222 LLTYCDSDSSPMALFLKMIGPTHGQMT 248
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 45/204 (22%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN- 125
+I TL + +F + G VA+K I + A R+ E+++L+H+N +
Sbjct: 17 EIVDTLGEGAFGKVVECIDHKAGGRHVAVK-IVKNVDRYCEAARS--EIQVLEHLNTTDP 73
Query: 126 -----VIGLLDVF--HSNTCLADFKNVYMVTHLMGADLNNILRTQKL---SDDHVQFLVY 175
+ +L+ F H + C+ V L+G + ++ DH++ + Y
Sbjct: 74 NSTFRCVQMLEWFEHHGHICI--------VFELLGLSTYDFIKENGFLPFRLDHIRKMAY 125
Query: 176 QILRGLKYIHSAGIIHRDLKPSNI---------------------AVNEDCELKILDFGL 214
QI + + ++HS + H DLKP NI +N D +K++DFG
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD--IKVVDFGS 183
Query: 215 ARPTENEMTGYVATRWYRAPEIML 238
A + + V R YRAPE++L
Sbjct: 184 ATYDDEHHSTLVXXRHYRAPEVIL 207
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 18/207 (8%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN--VY 146
+G +VA+K + +P H +E+ +L+++ HEN+ V + C D N
Sbjct: 37 TGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENI-----VKYKGICTEDGGNGIKL 90
Query: 147 MVTHLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHRDLKPSNIAVNED 204
++ L L L K + Q L Y QI +G+ Y+ S +HRDL N+ V +
Sbjct: 91 IMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE 150
Query: 205 CELKILDFGLARPTENEMTGYVATR-------WYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
++KI DFGL + E + WY APE ++ Y + V + L
Sbjct: 151 HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHE 209
Query: 258 SNIAVNEDCELKILDFGLARPTENEMT 284
+ D L + PT +MT
Sbjct: 210 LLTYCDSDSSPMALFLKMIGPTHGQMT 236
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 93 VAIKKIARPF-QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
VAIKK++ QS + +E+R L+ + H N I C ++V
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI------QYRGCYLREHTAWLVMEY 135
Query: 152 MGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
+++L K L + + + + L+GL Y+HS +IHRD+K NI ++E +K+
Sbjct: 136 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 195
Query: 210 LDFGLARPTENEMTGYVATRWYRAPEIML 238
DFG A +V T ++ APE++L
Sbjct: 196 GDFGSAS-IMAPANXFVGTPYWMAPEVIL 223
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299
+D+K NI ++E +K+ DFG A +V T ++ APE++L
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFGSAS-IMAPANXFVGTPYWMAPEVIL 223
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 30/192 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 68
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG---------ADLNNILRTQKLSDDHV 170
+ HE ++ L V +Y+VT M ++ LR +L D
Sbjct: 69 KLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--- 118
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATR 229
+ QI G+ Y+ +HRDL +NI V E+ K+ DFGLAR E NE T +
Sbjct: 119 --MAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 230 W---YRAPEIML 238
+ + APE L
Sbjct: 177 FPIKWTAPEAAL 188
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 25/171 (14%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVAIK+I + +E++ + +H N++ ++++ + D +++V L
Sbjct: 37 KVAIKRINLE-KCQTSMDELLKEIQAMSQCHHPNIVS----YYTSFVVKD--ELWLVMKL 89
Query: 152 M-GADLNNILR---------TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
+ G + +I++ + L + + ++ ++L GL+Y+H G IHRD+K NI +
Sbjct: 90 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL 149
Query: 202 NEDCELKILDFGLAR--PTENEMT------GYVATRWYRAPEIMLNWMHYN 244
ED ++I DFG++ T ++T +V T + APE+M Y+
Sbjct: 150 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD 200
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR--PTENEMT------GYVAT 289
L ++H N +D+K NI + ED ++I DFG++ T ++T +V T
Sbjct: 129 LEYLHKNGQ----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 290 RWYRAPEIMLNWMHYN-QTDIHQLNLIMEMLGTPPAEF 326
+ APE+M Y+ + DI + L T A +
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 25/171 (14%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVAIK+I + +E++ + +H N++ ++++ + D +++V L
Sbjct: 42 KVAIKRINLE-KCQTSMDELLKEIQAMSQCHHPNIVS----YYTSFVVKD--ELWLVMKL 94
Query: 152 M-GADLNNILR---------TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
+ G + +I++ + L + + ++ ++L GL+Y+H G IHRD+K NI +
Sbjct: 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL 154
Query: 202 NEDCELKILDFGLAR--PTENEMT------GYVATRWYRAPEIMLNWMHYN 244
ED ++I DFG++ T ++T +V T + APE+M Y+
Sbjct: 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD 205
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR--PTENEMT------GYVAT 289
L ++H N +D+K NI + ED ++I DFG++ T ++T +V T
Sbjct: 134 LEYLHKNGQ----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 290 RWYRAPEIMLNWMHYN-QTDIHQLNLIMEMLGTPPAEF 326
+ APE+M Y+ + DI + L T A +
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 46 TKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITE 95
Query: 151 LM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 96 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 155
Query: 207 LKILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 156 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 190
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V++ KI DFGLAR E NE T ++ + APE +
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 197
Query: 306 QTDIHQLNLIM 316
++D+ +++
Sbjct: 198 KSDVWSFGILL 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 44 TKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITE 93
Query: 151 LM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 94 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 153
Query: 207 LKILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 154 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 188
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V++ KI DFGLAR E NE T ++ + APE +
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 306 QTDIHQLNLIM 316
++D+ +++
Sbjct: 196 KSDVWSFGILL 206
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 68
Query: 120 HMNHENVIGLLDVFHSNTC--LADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQI 177
+ HE ++ L V + ++ + + + ++ LR +L D + QI
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQI 123
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRA 233
G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T ++ + A
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTA 183
Query: 234 PEIML 238
PE L
Sbjct: 184 PEAAL 188
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 30/192 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 61
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG---------ADLNNILRTQKLSDDHV 170
+ HE ++ L V +Y+VT M + LR +L D
Sbjct: 62 KLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--- 111
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATR 229
+ QI G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T +
Sbjct: 112 --MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 169
Query: 230 W---YRAPEIML 238
+ + APE L
Sbjct: 170 FPIKWTAPEAAL 181
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 188 KSDVWSFGILLTELTT 203
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 47 TKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITE 96
Query: 151 LM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 97 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 156
Query: 207 LKILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 157 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 191
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 202 VWSFGILL 209
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 30/201 (14%)
Query: 63 RGVIDIGP--TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKH 120
R + D P L + F ++F A + V AIK+I P + K RE++ L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFE-AKNKVDDCNYAIKRIRLPNRELAREK-VMREVKALAK 59
Query: 121 MNHENVIGLLDVFHSNTCLADFK----NVYMVTHLMGAD-------LNNILRTQKLSDDH 169
+ H ++ + + + VY+ + +N ++
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 170 VQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR------------- 216
+ QI ++++HS G++HRDLKPSNI D +K+ DFGL
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 217 --PTENEMTGYVATRWYRAPE 235
P TG V T+ Y +PE
Sbjct: 180 PMPAYARHTGQVGTKLYMSPE 200
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR---------------PTENEMTGYVATRWYRAPEI 297
+DLKPSNI D +K+ DFGL P TG V T+ Y +PE
Sbjct: 142 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ 201
Query: 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKK 348
+ + ++ DI L LI+ L P + M ++ + + + + PL T+K
Sbjct: 202 IHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQK 252
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 28 LVREKATGRYYAMKILRKEVIIAKDEVAH---TVTESRVLQNTRHPFLTALKYAFQTHDR 84
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
L +++ + G +L ++ R + +++ +F +I+ L+Y+HS +++RD+K
Sbjct: 85 LC-----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 139
Query: 198 NIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW------ 240
N+ +++D +KI DFGL + ++ M + T Y APE++ ++W
Sbjct: 140 NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 241 MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 200 MYEMMCGRLPFYNQD 214
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIMLNWMHYNQTD 308
++D+K N+ +++D +KI DFGL + ++ M + T Y APE++ + + D
Sbjct: 133 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 192
Query: 309 IHQLNLIM-EML 319
L ++M EM+
Sbjct: 193 WWGLGVVMYEMM 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAKDEVAH---TVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
L +++ + G +L ++ R + +++ +F +I+ L+Y+HS +++RD+K
Sbjct: 80 LC-----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134
Query: 198 NIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW------ 240
N+ +++D +KI DFGL + ++ M + T Y APE++ ++W
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 241 MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 195 MYEMMCGRLPFYNQD 209
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIMLNWMHYNQTD 308
++D+K N+ +++D +KI DFGL + ++ M + T Y APE++ + + D
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 187
Query: 309 IHQLNLIM-EML 319
L ++M EM+
Sbjct: 188 WWGLGVVMYEMM 199
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAKDEVAH---TVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
L +++ + G +L ++ R + +++ +F +I+ L+Y+HS +++RD+K
Sbjct: 80 LC-----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134
Query: 198 NIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW------ 240
N+ +++D +KI DFGL + ++ M + T Y APE++ ++W
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 241 MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 195 MYEMMCGRLPFYNQD 209
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIMLNWMHYNQTD 308
++D+K N+ +++D +KI DFGL + ++ M + T Y APE++ + + D
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 187
Query: 309 IHQLNLIM-EML 319
L ++M EM+
Sbjct: 188 WWGLGVVMYEMM 199
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAKDEVAH---TVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
L +++ + G +L ++ R + +++ +F +I+ L+Y+HS +++RD+K
Sbjct: 80 LC-----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134
Query: 198 NIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW------ 240
N+ +++D +KI DFGL + ++ M + T Y APE++ ++W
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 241 MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 195 MYEMMCGRLPFYNQD 209
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIMLNWMHYNQTD 308
++D+K N+ +++D +KI DFGL + ++ M + T Y APE++ + + D
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 187
Query: 309 IHQLNLIM-EML 319
L ++M EM+
Sbjct: 188 WWGLGVVMYEMM 199
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 68
Query: 120 HMNHENVIGLLDVFHSNTC--LADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQI 177
+ HE ++ L V + ++ + + + ++ LR +L D + QI
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQI 123
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRA 233
G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T ++ + A
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA 183
Query: 234 PEIML 238
PE L
Sbjct: 184 PEAAL 188
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 26 LVREKATGRYYAMKILRKEVIIAKDEVAH---TVTESRVLQNTRHPFLTALKYAFQTHDR 82
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
L +++ + G +L ++ R + +++ +F +I+ L+Y+HS +++RD+K
Sbjct: 83 LC-----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 137
Query: 198 NIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW------ 240
N+ +++D +KI DFGL + ++ M + T Y APE++ ++W
Sbjct: 138 NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 197
Query: 241 MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 198 MYEMMCGRLPFYNQD 212
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIMLNWMHYNQTD 308
++D+K N+ +++D +KI DFGL + ++ M + T Y APE++ + + D
Sbjct: 131 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 190
Query: 309 IHQLNLIM-EML 319
L ++M EM+
Sbjct: 191 WWGLGVVMYEMM 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 30/205 (14%)
Query: 72 LSKESFD---LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIG 128
L K +F L+ A +K+ K++ H T E R+L++ H +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH---TVTESRVLQNTRHPFLTA 69
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSA 187
L F ++ L +++ + G +L ++ R + +++ +F +I+ L+Y+HS
Sbjct: 70 LKYAFQTHDRLC-----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 188 GIIHRDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM------- 237
+++RD+K N+ +++D +KI DFGL + ++ M + T Y APE++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 238 -LNW------MHYNQTG-VPFYFQD 254
++W M+ G +PFY QD
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQD 209
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIMLNWMHYNQTD 308
++D+K N+ +++D +KI DFGL + ++ M + T Y APE++ + + D
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 187
Query: 309 IHQLNLIM-EML 319
L ++M EM+
Sbjct: 188 WWGLGVVMYEMM 199
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 57 PYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
P EI R I + L F ++ ++ + KVA+K + +P +V A E
Sbjct: 5 PAWEIPRESIKLVKKLGAGQFGEVWMGYYNNST--KVAVKTL-KPGTMSVQA--FLEEAN 59
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLV- 174
++K + H+ ++ L V + +Y++T M L + L++ + + L+
Sbjct: 60 LMKTLQHDKLVRLYAVVTKE------EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID 113
Query: 175 --YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW- 230
QI G+ YI IHRDL+ +N+ V+E KI DFGLAR E NE T ++
Sbjct: 114 FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 173
Query: 231 --YRAPE 235
+ APE
Sbjct: 174 IKWTAPE 180
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPE 296
+DL+ +N+ V+E KI DFGLAR E NE T ++ + APE
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 180
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 38 TKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITE 87
Query: 151 LM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
Query: 207 LKILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 148 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 182
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 193 VWSFGILL 200
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 93 VAIKKIARPF-QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
VAIKK++ QS + +E+R L+ + H N I C ++V
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI------QYRGCYLREHTAWLVMEY 96
Query: 152 MGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
+++L K L + + + + L+GL Y+HS +IHRD+K NI ++E +K+
Sbjct: 97 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 156
Query: 210 LDFGLARPTENEMTGYVATRWYRAPEIML 238
DFG A +V T ++ APE++L
Sbjct: 157 GDFGSA-SIMAPANXFVGTPYWMAPEVIL 184
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299
+D+K NI ++E +K+ DFG A +V T ++ APE++L
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFGSA-SIMAPANXFVGTPYWMAPEVIL 184
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAKDEVAH---TVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
L +++ + G +L ++ R + +++ +F +I+ L+Y+HS +++RD+K
Sbjct: 80 LC-----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134
Query: 198 NIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW------ 240
N+ +++D +KI DFGL + ++ M + T Y APE++ ++W
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 241 MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 195 MYEMMCGRLPFYNQD 209
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIMLNWMHYNQTD 308
++D+K N+ +++D +KI DFGL + ++ M + T Y APE++ + + D
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 187
Query: 309 IHQLNLIM-EML 319
L ++M EM+
Sbjct: 188 WWGLGVVMYEMM 199
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 40 KVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITEY 89
Query: 152 M-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 90 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 149
Query: 208 KILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 150 KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 183
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 194 VWSFGILL 201
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 40 TKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITE 89
Query: 151 LM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 90 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 149
Query: 207 LKILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 150 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 184
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 195 VWSFGILL 202
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQ 171
E+ +L +H ++ LL ++ D K M+ G ++ I+ + L++ +Q
Sbjct: 58 EIEILATCDHPYIVKLLGAYYH-----DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ 112
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR---PTENEMTGYVAT 228
+ Q+L L ++HS IIHRDLK N+ + + ++++ DFG++ T + ++ T
Sbjct: 113 VVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT 172
Query: 229 RWYRAPEIML 238
++ APE+++
Sbjct: 173 PYWMAPEVVM 182
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 35/172 (20%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR---PTENEMTGYVATRWYRA 294
LN++H + +DLK N+ + + ++++ DFG++ T + ++ T ++ A
Sbjct: 122 LNFLHSKR----IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 177
Query: 295 PEIMLNWMHYN-----QTDIHQLNLI---MEMLGTP-----PAEFMAKIS-SDSARKYIN 340
PE+++ + + DI L + M + P P + KI+ SD
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP 237
Query: 341 SLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
S + +DF ++ NP+ R +A Q L HP++S +
Sbjct: 238 SKWSVEFRDFLKIALDKNPET--------------RPSAAQLLEHPFVSSIT 275
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L + F ++ + + +VAIK + +P + + +E +++K
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT--RVAIKTL-KP--GTMSPEAFLQEAQVMK 58
Query: 120 HMNHENVIGLLDVFHSN--TCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQI 177
+ HE ++ L V + ++ + + + + LR +L D + QI
Sbjct: 59 KLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQI 113
Query: 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRA 233
G+ Y+ +HRDL+ +NI V E+ K+ DFGLAR E NE T ++ + A
Sbjct: 114 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTA 173
Query: 234 PEIML 238
PE L
Sbjct: 174 PEAAL 178
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V E+ K+ DFGLAR E NE T ++ + APE L
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 184
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 185 KSDVWSFGILLTELTT 200
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 48 TKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITE 97
Query: 151 LM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 98 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 157
Query: 207 LKILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 158 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 192
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V++ KI DFGLAR E NE T ++ + APE +
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 199
Query: 306 QTDIHQLNLIM 316
++D+ +++
Sbjct: 200 KSDVWSFGILL 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 39 KVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITEY 88
Query: 152 M-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 148
Query: 208 KILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 149 KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 182
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 193 VWSFGILL 200
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 43 TKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITE 92
Query: 151 LM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 93 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 152
Query: 207 LKILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 153 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 187
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 198 VWSFGILL 205
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 24/202 (11%)
Query: 52 DHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRT 111
D+F Y +I + + G + E +D++ + V++ K ++ V+A +
Sbjct: 54 DNFLNRYEKIVKKIR--GLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQ----KVYAMKL 107
Query: 112 YRELRMLKHMN------HENVIGLLD---VFHSNTCLADFKNVYMVTHLM-GADLNNILR 161
+ M+K + +++ + V D K +YMV M G DL N++
Sbjct: 108 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS 167
Query: 162 TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221
+ + +F +++ L IHS G+IHRD+KP N+ +++ LK+ DFG +
Sbjct: 168 NYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE- 226
Query: 222 MTGY------VATRWYRAPEIM 237
TG V T Y +PE++
Sbjct: 227 -TGMVHCDTAVGTPDYISPEVL 247
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 44 TKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITE 93
Query: 151 LM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 94 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 153
Query: 207 LKILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 154 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 188
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 199 VWSFGILL 206
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQ 171
E+ +L +H ++ LL ++ D K M+ G ++ I+ + L++ +Q
Sbjct: 66 EIEILATCDHPYIVKLLGAYYH-----DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ 120
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR---PTENEMTGYVAT 228
+ Q+L L ++HS IIHRDLK N+ + + ++++ DFG++ T + ++ T
Sbjct: 121 VVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT 180
Query: 229 RWYRAPEIML 238
++ APE+++
Sbjct: 181 PYWMAPEVVM 190
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 35/172 (20%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR---PTENEMTGYVATRWYRA 294
LN++H + +DLK N+ + + ++++ DFG++ T + ++ T ++ A
Sbjct: 130 LNFLHSKR----IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 185
Query: 295 PEIMLNWMHYN-----QTDIHQLNLI---MEMLGTP-----PAEFMAKIS-SDSARKYIN 340
PE+++ + + DI L + M + P P + KI+ SD
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP 245
Query: 341 SLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYS 392
S + +DF ++ NP+ R +A Q L HP++S +
Sbjct: 246 SKWSVEFRDFLKIALDKNPET--------------RPSAAQLLEHPFVSSIT 283
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 39 KVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITEY 88
Query: 152 M-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 148
Query: 208 KILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 149 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 182
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 193 VWSFGILL 200
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 29/224 (12%)
Query: 37 WTVYPASKLPSRRLHDHFNQPYSE---ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKV 93
W + + + S D PY+E R + G TL +F + + +
Sbjct: 8 WKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 67
Query: 94 AIKKIARPFQSAVHAKRT---YRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVT 149
+K + +S HA EL+++ H+ HEN++ LL C + +
Sbjct: 68 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL-----GACTHGGPVLVITE 122
Query: 150 HLMGADLNNILRTQKLSD------------DHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
+ DL N LR + +D D + F Q+ +G+ ++ S IHRD+
Sbjct: 123 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF-SSQVAQGMAFLASKNCIHRDVAAR 181
Query: 198 NIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 241
N+ + KI DFGLAR N+ + Y+ R P + WM
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNARLP---VKWM 221
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 86 DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145
D S VA+K I R + + KR R L+H N++ +V + T LA +
Sbjct: 39 DKQSNELVAVKYIERGEKIDENVKREIINHRSLRH---PNIVRFKEVILTPTHLA----I 91
Query: 146 YMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED- 204
M G I + S+D +F Q++ G+ Y H+ + HRDLK N ++
Sbjct: 92 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP 151
Query: 205 -CELKILDFGLARPT--ENEMTGYVATRWYRAPEIML 238
LKI DFG ++ + ++ V T Y APE++L
Sbjct: 152 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 188
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIAR-PFQSAVHAKRTYRELRMLKHMNHENV 126
+G TL +F + ++G KVA+K + R +S + RE++ LK H ++
Sbjct: 15 LGDTLGVGTFGKV-KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 127 IGLLDVFHSNTCLADFKNVYMVT-HLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYI 184
I L V + T DF +MV ++ G +L + I + ++ + + L QIL + Y
Sbjct: 74 IKLYQVISTPT---DF---FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 185 HSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE--MTGYVATRWYRAPEIM 237
H ++HRDLKP N+ ++ KI DFGL+ + + + Y APE++
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVI 182
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE--MTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLKP N+ ++ KI DFGL+ + + + Y APE++ ++ + DI
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDI 194
Query: 310 HQLNLIMEML--GTPP 323
+I+ L GT P
Sbjct: 195 WSCGVILYALLCGTLP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 34 KVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITEY 83
Query: 152 M-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 84 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 143
Query: 208 KILDFGLARPTE-NEMTGYVATRW---YRAPE 235
KI DFGLAR E NE T ++ + APE
Sbjct: 144 KIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 188 VWSFGILL 195
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIAR-PFQSAVHAKRTYRELRMLKHMNHENV 126
+G TL +F + ++G KVA+K + R +S + RE++ LK H ++
Sbjct: 15 LGDTLGVGTFGKV-KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 127 IGLLDVFHSNTCLADFKNVYMVT-HLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYI 184
I L V + T DF +MV ++ G +L + I + ++ + + L QIL + Y
Sbjct: 74 IKLYQVISTPT---DF---FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 185 HSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE--MTGYVATRWYRAPEIM 237
H ++HRDLKP N+ ++ KI DFGL+ + + + Y APE++
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVI 182
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE--MTGYVATRWYRAPEIMLNWMHYN-QTDI 309
+DLKP N+ ++ KI DFGL+ + + + Y APE++ ++ + DI
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDI 194
Query: 310 HQLNLIMEML--GTPP 323
+I+ L GT P
Sbjct: 195 WSCGVILYALLCGTLP 210
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 29/224 (12%)
Query: 37 WTVYPASKLPSRRLHDHFNQPYSE---ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKV 93
W + + + S D PY+E R + G TL +F + + +
Sbjct: 16 WKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 75
Query: 94 AIKKIARPFQSAVHAKRT---YRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVT 149
+K + +S HA EL+++ H+ HEN++ LL C + +
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL-----GACTHGGPVLVITE 130
Query: 150 HLMGADLNNILRTQKLSD------------DHVQFLVYQILRGLKYIHSAGIIHRDLKPS 197
+ DL N LR + +D D + F Q+ +G+ ++ S IHRD+
Sbjct: 131 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF-SSQVAQGMAFLASKNCIHRDVAAR 189
Query: 198 NIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 241
N+ + KI DFGLAR N+ + Y+ R P + WM
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNARLP---VKWM 229
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 23/148 (15%)
Query: 114 ELRMLKHMNHENVIGLLD--VFHSNTCLADFKNVYMV-THLMGADLNNIL-----RTQKL 165
E+ +L+ + H N++ D + +NT L Y+V + G DL +++ Q L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTL------YIVMEYCEGGDLASVITKGTKERQYL 108
Query: 166 SDDHVQFLVYQILRGLKYIH--SAG---IIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220
++ V ++ Q+ LK H S G ++HRDLKP+N+ ++ +K+ DFGLAR +
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 221 EMT---GYVATRWYRAPEIMLNWMHYNQ 245
+ + +V T +Y +PE M N M YN+
Sbjct: 169 DTSFAKAFVGTPYYMSPEQM-NRMSYNE 195
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT---GYVATRWYRAPEIMLNWMHYNQ-TD 308
+DLKP+N+ ++ +K+ DFGLAR ++ + +V T +Y +PE M N M YN+ +D
Sbjct: 140 RDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM-NRMSYNEKSD 198
Query: 309 IHQLNLIMEMLGT--PP------AEFMAKISSDSARK 337
I L ++ L PP E KI R+
Sbjct: 199 IWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 46 PSRRLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSA----LDSVSGVKVAIKKIARP 101
P++ +DH E R + G TL +F + + + S + + VA+K + +P
Sbjct: 25 PTQLPYDH----KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KP 79
Query: 102 FQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNIL 160
+ EL++L ++ NH N++ LL C + + + DL N L
Sbjct: 80 SAHLTEREALMSELKVLSYLGNHMNIVNLL-----GACTIGGPTLVITEYCCYGDLLNFL 134
Query: 161 RTQKLS-------------------DDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
R ++ S + + YQ+ +G+ ++ S IHRDL NI +
Sbjct: 135 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 194
Query: 202 NEDCELKILDFGLARPTENEMTGYVA-------TRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLAR +N+ + YV +W APE + N ++ ++ V Y
Sbjct: 195 THGRITKICDFGLARDIKND-SNYVVKGNARLPVKWM-APESIFNCVYTFESDVWSY 249
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA-------TRWYRAPEIMLNWMHYN 305
+DL NI + KI DFGLAR +N+ + YV +W APE + N ++
Sbjct: 185 RDLAARNILLTHGRITKICDFGLARDIKND-SNYVVKGNARLPVKWM-APESIFNCVYTF 242
Query: 306 QTDIHQLNLIM-EM--LGTPP 323
++D+ + + E+ LG+ P
Sbjct: 243 ESDVWSYGIFLWELFSLGSSP 263
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 43/234 (18%)
Query: 46 PSRRLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSA----LDSVSGVKVAIKKIARP 101
P++ +DH E R + G TL +F + + + S + + VA+K + +P
Sbjct: 32 PTQLPYDH----KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KP 86
Query: 102 FQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNIL 160
+ EL++L ++ NH N++ LL C + + + DL N L
Sbjct: 87 SAHLTEREALMSELKVLSYLGNHMNIVNLL-----GACTIGGPTLVITEYCCYGDLLNFL 141
Query: 161 RTQKLS-------------------DDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
R ++ S + + YQ+ +G+ ++ S IHRDL NI +
Sbjct: 142 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 201
Query: 202 NEDCELKILDFGLARPTENEMTGYVA-------TRWYRAPEIMLNWMHYNQTGV 248
KI DFGLAR +N+ + YV +W APE + N ++ ++ V
Sbjct: 202 THGRITKICDFGLARDIKND-SNYVVKGNARLPVKW-MAPESIFNCVYTFESDV 253
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA-------TRWYRAPEIMLNWMHYN 305
+DL NI + KI DFGLAR +N+ + YV +W APE + N ++
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARDIKND-SNYVVKGNARLPVKW-MAPESIFNCVYTF 249
Query: 306 QTDIHQLNLIM-EM--LGTPP 323
++D+ + + E+ LG+ P
Sbjct: 250 ESDVWSYGIFLWELFSLGSSP 270
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 10 GLELLETGRLLSRTLTDGTLSRS----IVRLWTVYPASKLPSRRLHDHFNQPYSEICRGV 65
G ++ E G+++ GT+S + + +W Y P HDH Y
Sbjct: 112 GYDVDEQGKIVR---GKGTVSSNYDNYVFDIWKQYYPQ--PVEIKHDHVLDHY------- 159
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN 125
DI L +F ++ + +G A K + P +S R +E++ + + H
Sbjct: 160 -DIHEELGTGAFGVVHR-VTERATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPT 215
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQ--KLSDDHVQFLVYQILRGLKY 183
++ L D F D + V + + G +L + + K+S+D + Q+ +GL +
Sbjct: 216 LVNLHDAFED-----DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270
Query: 184 IHSAGIIHRDLKPSNI--AVNEDCELKILDFGLARPTENEMTGYV--ATRWYRAPEI 236
+H +H DLKP NI ELK++DFGL + + + V T + APE+
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV 327
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 14/204 (6%)
Query: 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI--AVNEDCELKILDFGLAR 277
N+M+ A + R L MH N + DLKP NI ELK++DFGL
Sbjct: 250 NKMSEDEAVEYMRQVCKGLCHMHENN----YVHLDLKPENIMFTTKRSNELKLIDFGLTA 305
Query: 278 PTENEMTGYV--ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSA 335
+ + + V T + APE+ TD+ + ++ +L + + F + + D
Sbjct: 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDET 364
Query: 336 RKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
+ + S F G + R+T QAL HP+L+ + P
Sbjct: 365 LRNVKSCDWNMDD---SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG 421
Query: 396 DEPTSPP--YDQSFEDMDLPVDQW 417
+ P Y + + + D W
Sbjct: 422 RDSQIPSSRYTKIRDSIKTKYDAW 445
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 138 CLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKP 196
D + +YMV M G DL N++ + + +F +++ L IHS G IHRD+KP
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 201
Query: 197 SNIAVNEDCELKILDFGLARPTENE----MTGYVATRWYRAPEIM 237
N+ +++ LK+ DFG E V T Y +PE++
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 220 NEMTGY-VATRWYR--APEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA 276
N M+ Y V +W R E++L + G F +D+KP N+ +++ LK+ DFG
Sbjct: 163 NLMSNYDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTC 220
Query: 277 RPTENE----MTGYVATRWYRAPEIM 298
E V T Y +PE++
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYISPEVL 246
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 10 GLELLETGRLLSRTLTDGTLSRS----IVRLWTVYPASKLPSRRLHDHFNQPYSEICRGV 65
G ++ E G+++ GT+S + + +W Y P HDH Y
Sbjct: 6 GYDVDEQGKIVR---GKGTVSSNYDNYVFDIWKQYYPQ--PVEIKHDHVLDHY------- 53
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN 125
DI L +F ++ + +G A K + P +S R +E++ + + H
Sbjct: 54 -DIHEELGTGAFGVVHR-VTERATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPT 109
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQ--KLSDDHVQFLVYQILRGLKY 183
++ L D F + + V + + G +L + + K+S+D + Q+ +GL +
Sbjct: 110 LVNLHDAFEDDNEM-----VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 164
Query: 184 IHSAGIIHRDLKPSNI--AVNEDCELKILDFGLARPTENEMTGYV--ATRWYRAPEI 236
+H +H DLKP NI ELK++DFGL + + + V T + APE+
Sbjct: 165 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV 221
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 14/204 (6%)
Query: 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI--AVNEDCELKILDFGLAR 277
N+M+ A + R L MH N + DLKP NI ELK++DFGL
Sbjct: 144 NKMSEDEAVEYMRQVCKGLCHMHENN----YVHLDLKPENIMFTTKRSNELKLIDFGLTA 199
Query: 278 PTENEMTGYV--ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSA 335
+ + + V T + APE+ TD+ + ++ +L + + F + + D
Sbjct: 200 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDET 258
Query: 336 RKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPN 395
+ + S F G + R+T QAL HP+L+ + P
Sbjct: 259 LRNVKSCDWNMDD---SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG 315
Query: 396 DEPTSPP--YDQSFEDMDLPVDQW 417
+ P Y + + + D W
Sbjct: 316 RDSQIPSSRYTKIRDSIKTKYDAW 339
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 38 TKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITE 87
Query: 151 LM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L+T KL+ + + + QI G+ +I IHRDL+ +NI V++
Sbjct: 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
Query: 207 LKILDFGLARPTEN 220
KI DFGLAR E+
Sbjct: 148 CKIADFGLARLIED 161
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTEN 281
+ +DL+ +NI V++ KI DFGLAR E+
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 138 CLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKP 196
D + +YMV M G DL N++ + + +F +++ L IHS G IHRD+KP
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 196
Query: 197 SNIAVNEDCELKILDFGLARPTENE----MTGYVATRWYRAPEIM 237
N+ +++ LK+ DFG E V T Y +PE++
Sbjct: 197 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 241
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 220 NEMTGY-VATRWYR--APEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA 276
N M+ Y V +W R E++L + G F +D+KP N+ +++ LK+ DFG
Sbjct: 158 NLMSNYDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTC 215
Query: 277 RPTENE----MTGYVATRWYRAPEIM 298
E V T Y +PE++
Sbjct: 216 MKMNKEGMVRCDTAVGTPDYISPEVL 241
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 138 CLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKP 196
D + +YMV M G DL N++ + + +F +++ L IHS G IHRD+KP
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 201
Query: 197 SNIAVNEDCELKILDFGLARPTENE----MTGYVATRWYRAPEIM 237
N+ +++ LK+ DFG E V T Y +PE++
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 220 NEMTGY-VATRWYR--APEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA 276
N M+ Y V +W R E++L + G F +D+KP N+ +++ LK+ DFG
Sbjct: 163 NLMSNYDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTC 220
Query: 277 RPTENE----MTGYVATRWYRAPEIM 298
E V T Y +PE++
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYISPEVL 246
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSA----LDSVSGVKVAIKKIARPFQSAVHAKRTYREL 115
E R + G TL +F + + + S + + VA+K + +P + EL
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTEREALMSEL 77
Query: 116 RMLKHM-NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLS-------- 166
++L ++ NH N++ LL C + + + DL N LR ++ S
Sbjct: 78 KVLSYLGNHMNIVNLL-----GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 132
Query: 167 -----------DDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ + YQ+ +G+ ++ S IHRDL NI + KI DFGLA
Sbjct: 133 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 192
Query: 216 RPTENEMTGYVA-------TRWYRAPEIMLNWMHYNQTGVPFY 251
R +N+ + YV +W APE + N ++ ++ V Y
Sbjct: 193 RDIKND-SNYVVKGNARLPVKW-MAPESIFNCVYTFESDVWSY 233
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA-------TRWYRAPEIMLNWMHYN 305
+DL NI + KI DFGLAR +N+ + YV +W APE + N ++
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDIKND-SNYVVKGNARLPVKW-MAPESIFNCVYTF 226
Query: 306 QTDIHQLNLIM-EM--LGTPP 323
++D+ + + E+ LG+ P
Sbjct: 227 ESDVWSYGIFLWELFSLGSSP 247
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK-LSDD 168
R RE + +NH ++ + + T + M ++ G L +I+ T+ ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVM-EYVDGVTLRDIVHTEGPMTPK 116
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN------EM 222
++ + L + H GIIHRD+KP+NI ++ +K++DFG+AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 223 TGYVATRWYRAPE 235
+ T Y +PE
Sbjct: 177 AAVIGTAQYLSPE 189
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277
TE MT A LN+ H N +D+KP+NI ++ +K++DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 278 PTEN------EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPP 323
+ + + T Y +PE ++D++ L ++ E+L G PP
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 23/148 (15%)
Query: 114 ELRMLKHMNHENVIGLLD--VFHSNTCLADFKNVYMV-THLMGADLNNIL-----RTQKL 165
E+ +L+ + H N++ D + +NT L Y+V + G DL +++ Q L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTL------YIVMEYCEGGDLASVITKGTKERQYL 108
Query: 166 SDDHVQFLVYQILRGLKYIH--SAG---IIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220
++ V ++ Q+ LK H S G ++HRDLKP+N+ ++ +K+ DFGLAR +
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 221 EMT---GYVATRWYRAPEIMLNWMHYNQ 245
+ + +V T +Y +PE M N M YN+
Sbjct: 169 DTSFAKTFVGTPYYMSPEQM-NRMSYNE 195
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT---GYVATRWYRAPEIMLNWMHYNQ-TD 308
+DLKP+N+ ++ +K+ DFGLAR ++ + +V T +Y +PE M N M YN+ +D
Sbjct: 140 RDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM-NRMSYNEKSD 198
Query: 309 IHQLNLIMEMLGT--PP------AEFMAKISSDSARK 337
I L ++ L PP E KI R+
Sbjct: 199 IWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 46 PSRRLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSA----LDSVSGVKVAIKKIARP 101
P++ +DH E R + G TL +F + + + S + + VA+K + +P
Sbjct: 27 PTQLPYDH----KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KP 81
Query: 102 FQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNIL 160
+ EL++L ++ NH N++ LL C + + + DL N L
Sbjct: 82 SAHLTEREALMSELKVLSYLGNHMNIVNLL-----GACTIGGPTLVITEYCCYGDLLNFL 136
Query: 161 RTQKLS-------------------DDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201
R ++ S + + YQ+ +G+ ++ S IHRDL NI +
Sbjct: 137 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 196
Query: 202 NEDCELKILDFGLARPTENEMTGYVA-------TRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLAR +N+ + YV +W APE + N ++ ++ V Y
Sbjct: 197 THGRITKICDFGLARDIKND-SNYVVKGNARLPVKW-MAPESIFNCVYTFESDVWSY 251
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA-------TRWYRAPEIMLNWMHYN 305
+DL NI + KI DFGLAR +N+ + YV +W APE + N ++
Sbjct: 187 RDLAARNILLTHGRITKICDFGLARDIKND-SNYVVKGNARLPVKW-MAPESIFNCVYTF 244
Query: 306 QTDIHQLNLIM-EM--LGTPP 323
++D+ + + E+ LG+ P
Sbjct: 245 ESDVWSYGIFLWELFSLGSSP 265
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Query: 114 ELRMLKHMNHENVIGLLD--VFHSNTCLADFKNVYMV-THLMGADLNNIL-----RTQKL 165
E+ +L+ + H N++ D + +NT L Y+V + G DL +++ Q L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTL------YIVMEYCEGGDLASVITKGTKERQYL 108
Query: 166 SDDHVQFLVYQILRGLKYIH--SAG---IIHRDLKPSNIAVNEDCELKILDFGLAR---P 217
++ V ++ Q+ LK H S G ++HRDLKP+N+ ++ +K+ DFGLAR
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 218 TENEMTGYVATRWYRAPEIMLNWMHYNQ 245
E+ +V T +Y +PE M N M YN+
Sbjct: 169 DEDFAKEFVGTPYYMSPEQM-NRMSYNE 195
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR---PTENEMTGYVATRWYRAPEIMLNWMHYNQ-TD 308
+DLKP+N+ ++ +K+ DFGLAR E+ +V T +Y +PE M N M YN+ +D
Sbjct: 140 RDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM-NRMSYNEKSD 198
Query: 309 IHQLNLIMEMLGT--PP------AEFMAKISSDSARK 337
I L ++ L PP E KI R+
Sbjct: 199 IWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 21/222 (9%)
Query: 37 WTVYPASKLPSRRLHDHFNQPYSE---ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKV 93
W + + + S D PY+E R + G TL +F + + +
Sbjct: 16 WKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 75
Query: 94 AIKKIARPFQSAVHAKRT---YRELRMLKHMN-HENVIGLLD---------VFHSNTCLA 140
+K + +S HA EL+++ H+ HEN++ LL V C
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 141 DFKN-VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
D N + + ++ D + LS + Q+ +G+ ++ S IHRD+ N+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 200 AVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 241
+ KI DFGLAR N+ + Y+ R P + WM
Sbjct: 196 LLTNGHVAKIGDFGLARDIMND-SNYIVKGNARLP---VKWM 233
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 33/229 (14%)
Query: 37 WTVYPASKLPSRRLHDHFNQPYSE---ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKV 93
W + + + S D PY+E R + G TL +F + + +
Sbjct: 16 WKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 75
Query: 94 AIKKIARPFQSAVHAKRT---YRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYMVT 149
+K + +S HA EL+++ H+ HEN++ LL C + +
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL-----GACTHGGPVLVITE 130
Query: 150 HLMGADLNNILRTQK-----------------LSDDHVQFLVYQILRGLKYIHSAGIIHR 192
+ DL N LR ++ LS + Q+ +G+ ++ S IHR
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHR 190
Query: 193 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 241
D+ N+ + KI DFGLAR N+ + Y+ R P + WM
Sbjct: 191 DVAARNVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNARLP---VKWM 235
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 104
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 105 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGLAR E++ TR + P
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGLAR E++ TR + P
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSA----LDSVSGVKVAIKKIARPFQSAVHAKRTYREL 115
E R + G TL +F + + + S + + VA+K + +P + EL
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTEREALMSEL 100
Query: 116 RMLKHM-NHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLS-------- 166
++L ++ NH N++ LL C + + + DL N LR ++ S
Sbjct: 101 KVLSYLGNHMNIVNLL-----GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 155
Query: 167 -----------DDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
+ + YQ+ +G+ ++ S IHRDL NI + KI DFGLA
Sbjct: 156 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 215
Query: 216 RPTENEMTGYVA-------TRWYRAPEIMLNWMHYNQTGVPFY 251
R +N+ + YV +W APE + N ++ ++ V Y
Sbjct: 216 RHIKND-SNYVVKGNARLPVKW-MAPESIFNCVYTFESDVWSY 256
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA-------TRWYRAPEIMLNWMHYN 305
+DL NI + KI DFGLAR +N+ + YV +W APE + N ++
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARHIKND-SNYVVKGNARLPVKW-MAPESIFNCVYTF 249
Query: 306 QTDIHQLNLIM-EM--LGTPP 323
++D+ + + E+ LG+ P
Sbjct: 250 ESDVWSYGIFLWELFSLGSSP 270
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 121 MNHENVIGLLD----VFHSNTCLADFKNVYMV-THLMGADL-NNILRTQKLSDDHVQFLV 174
M + V+ LLD + ++C +Y V ++ G DL +I + K + F
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA 126
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVATR 229
+I GL ++H GII+RDLK N+ ++ + +KI DFG+ + E+ M G + T
Sbjct: 127 AEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTP 184
Query: 230 WYRAPEIM 237
Y APEI+
Sbjct: 185 DYIAPEII 192
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 25/107 (23%)
Query: 231 YRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG----- 285
+ A EI + ++ G+ ++DLK N+ ++ + +KI DFG+ + E+ M G
Sbjct: 124 FYAAEISIGLFFLHKRGI--IYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTRE 179
Query: 286 YVATRWYRAPEIM--------LNWMHYNQTDIHQLNLIMEML-GTPP 323
+ T Y APEI+ ++W Y L+ EML G PP
Sbjct: 180 FCGTPDYIAPEIIAYQPYGKSVDWWAYGV-------LLYEMLAGQPP 219
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 64 VNILLFMGYSTAPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 110
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 230
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA V +RW
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 157
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 9/39 (23%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
+DLK +NI ++ED +KI DFGLA V +RW
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 157
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 28 LVKEKATGRYYAMKILKKEVIVAKDEVAH---TLTENRVLQNSRHPFLTALKYSFQTHDR 84
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKP 196
L +++ + G +L ++ R + S+D +F +I+ L Y+HS +++RDLK
Sbjct: 85 LC-----FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 139
Query: 197 SNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW----- 240
N+ +++D +KI DFGL + + M + T Y APE++ ++W
Sbjct: 140 ENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 199
Query: 241 -MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 200 VMYEMMCGRLPFYNQD 215
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 228 TRWYRAPEI-MLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE---M 283
R+Y A + L+++H + V ++DLK N+ +++D +KI DFGL + + M
Sbjct: 112 ARFYGAEIVSALDYLHSEKNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 168
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML 319
+ T Y APE++ + + D L ++M EM+
Sbjct: 169 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 205
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K I R + + KR R L+H N++ +V + T LA + M
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRH---PNIVRFKEVILTPTHLA----IVMEYASG 99
Query: 153 GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED--CELKIL 210
G I + S+D +F Q++ G+ Y H+ + HRDLK N ++ LKI
Sbjct: 100 GELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIA 159
Query: 211 DFGLARPT--ENEMTGYVATRWYRAPEIML 238
DFG ++ + ++ V T Y APE++L
Sbjct: 160 DFGYSKASVLHSQPKSAVGTPAYIAPEVLL 189
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R I + L F ++ ++ + KVA+K + +P +V A E ++K
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNST--KVAVKTL-KPGTMSVQA--FLEEANLMK 63
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLV---Y 175
+ H+ ++ L V + +Y++T M L + L++ + + L+
Sbjct: 64 TLQHDKLVRLYAVVTRE------EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 117
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---Y 231
QI G+ YI IHRDL+ +N+ V+E KI DFGLAR E NE T ++ +
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW 177
Query: 232 RAPEIM 237
APE +
Sbjct: 178 TAPEAI 183
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL+ +N+ V+E KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 194 VWSFGILL 201
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 27 LVKEKATGRYYAMKILKKEVIVAKDEVAH---TLTENRVLQNSRHPFLTALKYSFQTHDR 83
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKP 196
L +++ + G +L ++ R + S+D +F +I+ L Y+HS +++RDLK
Sbjct: 84 LC-----FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 138
Query: 197 SNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW----- 240
N+ +++D +KI DFGL + + M + T Y APE++ ++W
Sbjct: 139 ENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 198
Query: 241 -MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 199 VMYEMMCGRLPFYNQD 214
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 228 TRWYRAPEI-MLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE---M 283
R+Y A + L+++H + V ++DLK N+ +++D +KI DFGL + + M
Sbjct: 111 ARFYGAEIVSALDYLHSEKNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 167
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML 319
+ T Y APE++ + + D L ++M EM+
Sbjct: 168 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 169 LVKEKATGRYYAMKILKKEVIVAKDEVAH---TLTENRVLQNSRHPFLTALKYSFQTHDR 225
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKP 196
L +++ + G +L ++ R + S+D +F +I+ L Y+HS +++RDLK
Sbjct: 226 LC-----FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 280
Query: 197 SNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW----- 240
N+ +++D +KI DFGL + + M + T Y APE++ ++W
Sbjct: 281 ENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 340
Query: 241 -MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 341 VMYEMMCGRLPFYNQD 356
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 228 TRWYRAPEI-MLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE---M 283
R+Y A + L+++H + V ++DLK N+ +++D +KI DFGL + + M
Sbjct: 253 ARFYGAEIVSALDYLHSEKNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 309
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML 319
+ T Y APE++ + + D L ++M EM+
Sbjct: 310 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 79 LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138
L+ A +K+ K++ H T E R+L++ H + L F ++
Sbjct: 26 LVKEKATGRYYAMKILKKEVIVAKDEVAH---TLTENRVLQNSRHPFLTALKYSFQTHDR 82
Query: 139 LADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKP 196
L +++ + G +L ++ R + S+D +F +I+ L Y+HS +++RDLK
Sbjct: 83 LC-----FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 137
Query: 197 SNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM--------LNW----- 240
N+ +++D +KI DFGL + + M + T Y APE++ ++W
Sbjct: 138 ENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 197
Query: 241 -MHYNQTG-VPFYFQD 254
M+ G +PFY QD
Sbjct: 198 VMYEMMCGRLPFYNQD 213
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 228 TRWYRAPEI-MLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE---M 283
R+Y A + L+++H + V ++DLK N+ +++D +KI DFGL + + M
Sbjct: 110 ARFYGAEIVSALDYLHSEKNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 166
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML 319
+ T Y APE++ + + D L ++M EM+
Sbjct: 167 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 203
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 31/206 (15%)
Query: 72 LSKESFD---LIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIG 128
L K +F L+ A +K+ K++ H T E R+L++ H +
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH---TLTENRVLQNSRHPFLTA 212
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHS- 186
L F ++ L +++ + G +L ++ R + S+D +F +I+ L Y+HS
Sbjct: 213 LKYSFQTHDRLC-----FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 267
Query: 187 AGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIM------ 237
+++RDLK N+ +++D +KI DFGL + + M + T Y APE++
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG 327
Query: 238 --LNW------MHYNQTG-VPFYFQD 254
++W M+ G +PFY QD
Sbjct: 328 RAVDWWGLGVVMYEMMCGRLPFYNQD 353
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 228 TRWYRAPEI-MLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE---M 283
R+Y A + L+++H + V ++DLK N+ +++D +KI DFGL + + M
Sbjct: 250 ARFYGAEIVSALDYLHSEKNVV---YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 306
Query: 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML 319
+ T Y APE++ + + D L ++M EM+
Sbjct: 307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y HL ++ +KL D +
Sbjct: 80 VNILLFMGYSTAPQLAIV----TQWCEGSSLYH--HLHASETK--FEMKKLID-----IA 126
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
Q RG+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA 276
+DLK +NI ++ED +KI DFGLA
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
T+ K F + L G KVA+K I ++ A+ E ++ + H N++ LL
Sbjct: 200 TIGKGEFGDVM---LGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 131 DVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---LSDDHVQFLVYQILRGLKYIHS 186
V + + +Y+VT M L + LR++ L D + + ++Y+
Sbjct: 253 GVI-----VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 187 AGIIHRDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAPEIM 237
+HRDL N+ V+ED K+ DFGL + + + TG + +W APE +
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEAL 358
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAPEIMLNWMHYN 305
G F +DL N+ V+ED K+ DFGL + + + TG + +W APE +
Sbjct: 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEALREKKFST 365
Query: 306 QTDIHQLNLIM 316
++D+ +++
Sbjct: 366 KSDVWSFGILL 376
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 104
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 105 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
F +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVA+K + Q ++ E ++K + H+ ++ L V + +Y++T
Sbjct: 35 KVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-------EPIYIITEY 84
Query: 152 M-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
M L + L+T KL+ + + + QI G+ +I IHR+L+ +NI V++
Sbjct: 85 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSC 144
Query: 208 KILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 145 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 178
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
++L+ +NI V++ KI DFGLAR E NE T ++ + APE + ++D
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 309 IHQLNLIM 316
+ +++
Sbjct: 189 VWSFGILL 196
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
T+ K F + L G KVA+K I ++ A+ E ++ + H N++ LL
Sbjct: 19 TIGKGEFGDVM---LGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 131 DVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---LSDDHVQFLVYQILRGLKYIHS 186
V + + +Y+VT M L + LR++ L D + + ++Y+
Sbjct: 72 GVI-----VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 187 AGIIHRDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAPEIM 237
+HRDL N+ V+ED K+ DFGL + + + TG + +W APE +
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEAL 177
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAPEIMLNWMHYN 305
G F +DL N+ V+ED K+ DFGL + + + TG + +W APE +
Sbjct: 126 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEALREAAFST 184
Query: 306 QTDIHQLNLIM 316
++D+ +++
Sbjct: 185 KSDVWSFGILL 195
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 104
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 105 HPNIIRLEGVVTKS------KPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAK----RTYRELRMLKHM 121
DIG L K F ++ A + + +A+K + F+S + + + RE+ + H+
Sbjct: 17 FDIGRPLGKGKFGNVYL-AREKQNKFIMALKVL---FKSQLEKEGVEHQLRREIEIQSHL 72
Query: 122 NHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILR 179
H N++ + + FH D K +Y++ G + + + + + ++
Sbjct: 73 RHPNILRMYNYFH------DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 126
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 213
L Y H +IHRD+KP N+ + ELKI DFG
Sbjct: 127 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 160
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 253 QDLKPSNIAVNEDCELKILDFG--LARPT--ENEMTGYVATRWYRAPEIMLNWMHYNQTD 308
+D+KP N+ + ELKI DFG + P+ M G T Y PE++ H + D
Sbjct: 139 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYLPPEMIEGKTHDEKVD 195
Query: 309 IHQLNLIME--MLGTPPAEFMAKISSDSARKYIN 340
+ ++ ++G PP F + +++ R+ +N
Sbjct: 196 LWCAGVLCYEFLVGMPP--FDSPSHTETHRRIVN 227
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIA-RPFQSAVHAKRTYRELRMLKHMNHENV 126
I + + F ++ +A + GV VA+KK+ A +E+ +LK +NH NV
Sbjct: 36 IEKKIGRGQFSEVYRAAC-LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV 94
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLMGA-DLNNILRTQK-----LSDDHVQFLVYQILRG 180
I F + + +V L A DL+ +++ K + + V Q+
Sbjct: 95 IKYYASFIEDN------ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 181 LKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG---YVATRWYRAPE 235
L+++HS ++HRD+KP+N+ + +K+ D GL R ++ T V T +Y +PE
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTG---YVATRWYRAPEIMLNWMHYNQTDI 309
+D+KP+N+ + +K+ D GL R ++ T V T +Y +PE + + ++DI
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDI 219
Query: 310 HQLNLIM 316
L ++
Sbjct: 220 WSLGCLL 226
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAK----RTYRELRMLKHM 121
DIG L K F ++ A + + +A+K + F+S + + + RE+ + H+
Sbjct: 16 FDIGRPLGKGKFGNVYL-AREKQNKFIMALKVL---FKSQLEKEGVEHQLRREIEIQSHL 71
Query: 122 NHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILR 179
H N++ + + FH D K +Y++ G + + + + + ++
Sbjct: 72 RHPNILRMYNYFH------DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 213
L Y H +IHRD+KP N+ + ELKI DFG
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 253 QDLKPSNIAVNEDCELKILDFG--LARPT--ENEMTGYVATRWYRAPEIMLNWMHYNQTD 308
+D+KP N+ + ELKI DFG + P+ M G T Y PE++ H + D
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYLPPEMIEGKTHDEKVD 194
Query: 309 IHQLNLIME--MLGTPPAEFMAKISSDSARKYIN 340
+ ++ ++G PP F + +++ R+ +N
Sbjct: 195 LWCAGVLCYEFLVGMPP--FDSPSHTETHRRIVN 226
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
T+ K F + L G KVA+K I ++ A+ E ++ + H N++ LL
Sbjct: 28 TIGKGEFGDVM---LGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 131 DVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---LSDDHVQFLVYQILRGLKYIHS 186
V + + +Y+VT M L + LR++ L D + + ++Y+
Sbjct: 81 GVI-----VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 187 AGIIHRDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAPEIM 237
+HRDL N+ V+ED K+ DFGL + + + TG + +W APE +
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEAL 186
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAPEIMLNWMHYN 305
G F +DL N+ V+ED K+ DFGL + + + TG + +W APE +
Sbjct: 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEALREKKFST 193
Query: 306 QTDIHQLNLIM 316
++D+ +++
Sbjct: 194 KSDVWSFGILL 204
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 75
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 76 HPNIIRLEGVVTKS------KPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 75
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 76 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 69 VNILLFMGYSTKPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 115
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 230
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA V +RW
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 162
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 9/39 (23%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
+DLK +NI ++ED +KI DFGLA V +RW
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 162
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQ--KLSDDHVQ 171
E+ ++ ++H +I L D F ++ V ++ L G +L + + + K+S+ V
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDK-----YEMVLILEFLSGGELFDRIAAEDYKMSEAEVI 152
Query: 172 FLVYQILRGLKYIHSAGIIHRDLKPSNI--AVNEDCELKILDFGLA-RPTENEMTGY-VA 227
+ Q GLK++H I+H D+KP NI + +KI+DFGLA + +E+ A
Sbjct: 153 NYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA 212
Query: 228 TRWYRAPEIM 237
T + APEI+
Sbjct: 213 TAEFAAPEIV 222
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 220 NEMTGYVATRWYRAPEI-MLNWMHYNQTGVPFYFQ------DLKPSNI--AVNEDCELKI 270
E+ +A Y+ E ++N+M G+ + D+KP NI + +KI
Sbjct: 133 GELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKI 192
Query: 271 LDFGLA-RPTENEMTGYV-ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMA 328
+DFGLA + +E+ AT + APEI+ TD+ + ++ +L ++
Sbjct: 193 IDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL-------LS 245
Query: 329 KISSDSARKYINSLPLLTKKDFR---QVFKGANPQAIXXXXXXXXXXXXKRITAEQALAH 385
+S + + +L + + D+ F +P+A KR+T AL H
Sbjct: 246 GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305
Query: 386 PYL 388
P+L
Sbjct: 306 PWL 308
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 6 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 66 VNILLFMGYSTKPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 112
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 230
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA V +RW
Sbjct: 113 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 159
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 9/39 (23%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
+DLK +NI ++ED +KI DFGLA V +RW
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 159
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 92
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 93 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 146
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 147 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 104
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 105 HPNIIRLEGVVTKS------KPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 64 VNILLFMGYSTKPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 110
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 230
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA V +RW
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 157
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 9/39 (23%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
+DLK +NI ++ED +KI DFGLA V +RW
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 157
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 104
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 105 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 69 VNILLFMGYSTKPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 115
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 230
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA V +RW
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 162
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 9/39 (23%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
+DLK +NI ++ED +KI DFGLA V +RW
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLAT---------VKSRW 162
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 104
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 105 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 104
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 105 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 104
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 105 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 136 NTCLADFKNVYMV-THLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRD 193
++C +Y V ++ G DL +I + + + H F +I GL ++ S GII+RD
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 194 LKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVATRWYRAPEIM 237
LK N+ ++ + +KI DFG+ + EN G + T Y APEI+
Sbjct: 468 LKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEII 514
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 231 YRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG----- 285
+ A EI + G+ ++DLK N+ ++ + +KI DFG+ + EN G
Sbjct: 446 FYAAEIAIGLFFLQSKGI--IYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKX 501
Query: 286 YVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPPAE 325
+ T Y APEI+ + D +++ EML G P E
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADL-NNILRTQKLSDDHVQFLVY 175
+LK++ H ++GL H + AD K +++ ++ G +L ++ R + + +F
Sbjct: 92 LLKNVKHPFLVGL----HFSFQTAD-KLYFVLDYINGGELFYHLQRERCFLEPRARFYAA 146
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGYVATRWYR 232
+I L Y+HS I++RDLKP NI ++ + + DFGL + + + + T Y
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYL 206
Query: 233 APEIM 237
APE++
Sbjct: 207 APEVL 211
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGYVATRWYRAPEIMLNWMHYNQTD 308
++DLKP NI ++ + + DFGL + + + + T Y APE++ + D
Sbjct: 162 YRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVD 221
Query: 309 IHQLNLIM-EML-GTPPAEFMAKISSDSARKYINSL 342
L ++ EML G PP S ++A Y N L
Sbjct: 222 WWCLGAVLYEMLYGLPPF-----YSRNTAEMYDNIL 252
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 8 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y HL ++ +KL D +
Sbjct: 68 VNILLFMGYSTKPQLAIV----TQWCEGSSLYH--HLHASETK--FEMKKLID-----IA 114
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 230
Q RG+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA V +RW
Sbjct: 115 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA---------TVKSRW 161
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 177 ILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL-ARPTENEMTGYVATRWYRAPE 235
+LR ++++ + KP V + CE L L A T+ EM + R
Sbjct: 61 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI--ARQTA 118
Query: 236 IMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
++++H +DLK +NI ++ED +KI DFGLA V +RW
Sbjct: 119 RGMDYLHAKS----IIHRDLKSNNIFLHEDNTVKIGDFGLA---------TVKSRW 161
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 102
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 103 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 156
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL+R E++ TR + P
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLL 130
T+ K F + L G KVA+K I ++ A+ E ++ + H N++ LL
Sbjct: 13 TIGKGEFGDVM---LGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 131 DVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---LSDDHVQFLVYQILRGLKYIHS 186
V + + +Y+VT M L + LR++ L D + + ++Y+
Sbjct: 66 GVI-----VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 187 AGIIHRDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAPEIM 237
+HRDL N+ V+ED K+ DFGL + + + TG + +W APE +
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEAL 171
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAPEIMLNWMHYN 305
G F +DL N+ V+ED K+ DFGL + + + TG + +W APE +
Sbjct: 120 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEALREKKFST 178
Query: 306 QTDIHQLNLIM 316
++D+ +++
Sbjct: 179 KSDVWSFGILL 189
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 64 VNILLFMGYSTKPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 110
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA 276
+DLK +NI ++ED +KI DFGLA
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 136 NTCLADFKNVYMV-THLMGADL-NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRD 193
++C +Y V ++ G DL +I + + + H F +I GL ++ S GII+RD
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 194 LKPSNIAVNEDCELKILDFGLARPTENEMTG-----YVATRWYRAPEIM 237
LK N+ ++ + +KI DFG+ + EN G + T Y APEI+
Sbjct: 147 LKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEII 193
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 231 YRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG----- 285
+ A EI + G+ ++DLK N+ ++ + +KI DFG+ + EN G
Sbjct: 125 FYAAEIAIGLFFLQSKGI--IYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKX 180
Query: 286 YVATRWYRAPEIMLNWMHYNQTDIHQLNLIM-EML-GTPPAE 325
+ T Y APEI+ + D +++ EML G P E
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMN 122
I I + F + S L S + VAIK + + +R + E ++ +
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFD 104
Query: 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILR 179
H N+I L V + K V +VT M L++ LR +Q ++ I
Sbjct: 105 HPNIIRLEGVVTKS------KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
G+KY+ G +HRDL NI +N + K+ DFGL R E++ TR + P
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295
+ +DL NI +N + K+ DFGL R E++ TR + P
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 24 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 84 VNILLFMGYSTKPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 130
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA
Sbjct: 131 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA 276
+DLK +NI ++ED +KI DFGLA
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 92 VNILLFMGYSTKPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 138
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 230
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA V +RW
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRW 185
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 9/39 (23%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
+DLK +NI ++ED +KI DFGLA V +RW
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRW 185
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 92 VNILLFMGYSTKPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 138
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA 276
+DLK +NI ++ED +KI DFGLA
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 31 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y H++ I KL D +
Sbjct: 91 VNILLFMGYSTKPQLAIV----TQWCEGSSLYHHLHIIETKFEMI----KLID-----IA 137
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 230
Q +G+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA V +RW
Sbjct: 138 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRW 184
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 9/39 (23%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291
+DLK +NI ++ED +KI DFGLA V +RW
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRW 184
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-----FQSAVHAKRTYRE 114
EI G I +G + SF ++ VK+ P F++ V R R
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 115 LRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV 174
+ +L M + L V T + ++Y HL ++ +KL D +
Sbjct: 80 VNILLFMGYSTKPQLAIV----TQWCEGSSLYH--HLHASETK--FEMKKLID-----IA 126
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215
Q RG+ Y+H+ IIHRDLK +NI ++ED +KI DFGLA
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 177 ILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL-ARPTENEMTGYVATRWYRAPE 235
+LR ++++ + KP V + CE L L A T+ EM + R
Sbjct: 73 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI--ARQTA 130
Query: 236 IMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA 276
++++H +DLK +NI ++ED +KI DFGLA
Sbjct: 131 RGMDYLHAKS----IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 31/204 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++T +L+ LR+++
Sbjct: 74 ILIHIGHHLNVVNLL-----GACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 165 -------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 218 TENEMTGYVATRWYRAPEIMLNWM 241
+ YV R P L WM
Sbjct: 189 IYKD-PDYVRKGDARLP---LKWM 208
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 163 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 221
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 222 SDVWSFGVLL 231
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 86 DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145
D S VA+K I R + + KR R L+H N++ +V + T LA +
Sbjct: 40 DKQSNELVAVKYIERGEKIDENVKREIINHRSLRH---PNIVRFKEVILTPTHLA----I 92
Query: 146 YMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED- 204
M G I + S+D +F Q++ G+ Y H+ + HRDLK N ++
Sbjct: 93 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP 152
Query: 205 -CELKILDFGLARPT--ENEMTGYVATRWYRAPEIML 238
LKI FG ++ + ++ V T Y APE++L
Sbjct: 153 APRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN- 125
+I TL + +F + G +VA+K I + + A R E+ +L+ +N ++
Sbjct: 36 EIVSTLGEGTFGRVVQCVDHRRGGARVALK-IIKNVEKYKEAARL--EINVLEKINEKDP 92
Query: 126 -----VIGLLDVF--HSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQIL 178
+ + D F H + C++ F+ + + T D NN L V+ + +Q+
Sbjct: 93 DNKNLCVQMFDWFDYHGHMCIS-FELLGLSTFDFLKD-NNYL---PYPIHQVRHMAFQLC 147
Query: 179 RGLKYIHSAGIIHRDLKPSNIA-VNEDCEL------------------KILDFGLARPTE 219
+ +K++H + H DLKP NI VN D EL +++DFG A
Sbjct: 148 QAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDH 207
Query: 220 NEMTGYVATRWYRAPEIML 238
+ V+TR YRAPE++L
Sbjct: 208 EHHSTIVSTRHYRAPEVIL 226
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 19/82 (23%)
Query: 254 DLKPSNIA-VNEDCEL------------------KILDFGLARPTENEMTGYVATRWYRA 294
DLKP NI VN D EL +++DFG A + V+TR YRA
Sbjct: 162 DLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRA 221
Query: 295 PEIMLNWMHYNQTDIHQLNLIM 316
PE++L D+ + I+
Sbjct: 222 PEVILELGWSQPCDVWSIGCII 243
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 161 RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220
R +KL L QI +G+ YIHS +IHRDLKPSNI + + ++KI DFGL +N
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 221 E--MTGYVATRWYRAPE 235
+ T T Y +PE
Sbjct: 189 DGKRTRSKGTLRYMSPE 205
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE--MTGYVATRWYRAPEIMLNWMHYNQTDIH 310
+DLKPSNI + + ++KI DFGL +N+ T T Y +PE + + + + D++
Sbjct: 160 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLY 219
Query: 311 QLNLIMEML 319
L LI+ L
Sbjct: 220 ALGLILAEL 228
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 31/204 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++T +L+ LR+++
Sbjct: 74 ILIHIGHHLNVVNLL-----GACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 165 -------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 218 TENEMTGYVATRWYRAPEIMLNWM 241
+ YV R P L WM
Sbjct: 189 IYKD-PDYVRKGDARLP---LKWM 208
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 163 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 221
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 222 SDVWSFGVLL 231
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++T +L+ LR+++
Sbjct: 74 ILIHIGHHLNVVNLL-----GACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 165 -------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 163 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWM-APETIFDRVYTIQ 221
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 222 SDVWSFGVLL 231
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R +++G L + +F + + +D + + K+ + + + EL+
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 83 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY 137
Query: 165 ---LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR +
Sbjct: 138 KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD 197
Query: 222 MTGYVATRWYRAPEIMLNWM 241
YV R P L WM
Sbjct: 198 -PDYVRKGDARLP---LKWM 213
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 168 RDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 226
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 227 SDVWSFGVLL 236
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIGLLDVFH 134
S +L L +G VA+K++ S +R + RE+++LK ++ + ++ V +
Sbjct: 22 SVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVSY 78
Query: 135 SNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHR 192
+ + V + +L L + L+ + D + L+Y QI +G++Y+ S +HR
Sbjct: 79 GPG-RPELRLV--MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR 135
Query: 193 DLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPEIMLNWMHYNQ 245
DL NI V + +KI DFGLA+ P + + G WY APE + + + Q
Sbjct: 136 DLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDNIFSRQ 194
Query: 246 TGV 248
+ V
Sbjct: 195 SDV 197
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR--PTENEMT-----GYVATRWYRAPEIMLNWMHYN 305
+DL NI V + +KI DFGLA+ P + + G WY APE + + +
Sbjct: 135 RDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDNIFSR 193
Query: 306 QTDIHQLNLIMEMLGT-------PPAEFMAKISSD 333
Q+D+ +++ L T P AEF+ + +
Sbjct: 194 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE 228
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 86 DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145
D S VA+K I R + + KR R L+H N++ +V + T LA +
Sbjct: 40 DKQSNELVAVKYIERGEKIDENVKREIINHRSLRH---PNIVRFKEVILTPTHLA----I 92
Query: 146 YMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED- 204
M G I + S+D +F Q++ G+ Y H+ + HRDLK N ++
Sbjct: 93 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP 152
Query: 205 -CELKILDFGLARPT--ENEMTGYVATRWYRAPEIML 238
LKI FG ++ + ++ V T Y APE++L
Sbjct: 153 APRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL 189
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R +++G L + +F + + +D + + K+ + + + EL+
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 83 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY 137
Query: 165 ---LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR +
Sbjct: 138 KDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD 197
Query: 222 MTGYVATRWYRAPEIMLNWM 241
YV R P L WM
Sbjct: 198 -PDYVRKGDARLP---LKWM 213
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 168 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 226
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 227 SDVWSFGVLL 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 23 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 81
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 82 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 135
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 136 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 84
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 85 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 138
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 139 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 37 WTVYPASKLPSRRLHDHFNQPYSE---ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKV 93
W + + + S D PY+E R + G TL +F + + +
Sbjct: 16 WKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 75
Query: 94 AIKKIARPFQSAVHAKRT---YRELRMLKHMN-HENVIGLLD---------VFHSNTCLA 140
+K + +S HA EL+++ H+ HEN++ LL V C
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 141 DFKN-VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
D N + + ++ D + S + Q+ +G+ ++ S IHRD+ N+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 200 AVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 241
+ KI DFGLAR N+ + Y+ R P + WM
Sbjct: 196 LLTNGHVAKIGDFGLARDIMND-SNYIVKGNARLP---VKWM 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 49 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 107
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 108 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 161
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 162 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L F ++ + + + KVA+K + +P +V A E ++K
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHT--KVAVKTM-KPGSMSVEA--FLAEANVMK 65
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLV---Y 175
+ H+ ++ L V +Y++T M L + L++ + S + L+
Sbjct: 66 TLQHDKLVKLHAVVTKEP-------IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 118
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---Y 231
QI G+ +I IHRDL+ +NI V+ KI DFGLAR E NE T ++ +
Sbjct: 119 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 232 RAPE 235
APE
Sbjct: 179 TAPE 182
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN-QT 307
+DL+ +NI V+ KI DFGLAR E NE T ++ + APE +N+ + ++
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-AINFGSFTIKS 193
Query: 308 DIHQLN-LIMEML 319
D+ L+ME++
Sbjct: 194 DVWSFGILLMEIV 206
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 30 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 88
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 89 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 142
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIGLLDVFH 134
S +L L +G VA+K++ S +R + RE+++LK ++ + ++ V +
Sbjct: 26 SVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVSY 82
Query: 135 SNTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIH 191
+++ +V +L L + L+ + D + L+Y QI +G++Y+ S +H
Sbjct: 83 G----PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 138
Query: 192 RDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR-------WYRAPEIMLNWMHYN 244
RDL NI V + +KI DFGLA+ + YV WY APE + + +
Sbjct: 139 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSR 197
Query: 245 QTGV 248
Q+ V
Sbjct: 198 QSDV 201
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR-------WYRAPEIMLNWMHYN 305
+DL NI V + +KI DFGLA+ + YV WY APE + + +
Sbjct: 139 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSR 197
Query: 306 QTDIHQLNLIMEMLGT-------PPAEFMAKISSD 333
Q+D+ +++ L T P AEF+ + +
Sbjct: 198 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE 232
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 146 YMVTHLMGADLNNILRTQKL-SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
+++ + G DL+ L + S+ ++F +I+ GL+++H+ +++RDLKP+NI ++E
Sbjct: 268 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH 327
Query: 205 CELKILDFGLARP-TENEMTGYVATRWYRAPEIMLNWMHYNQTG 247
++I D GLA ++ + V T Y APE++ + Y+ +
Sbjct: 328 GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 229 RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP-TENEMTGYV 287
R+Y A EI+L H + V ++DLKP+NI ++E ++I D GLA ++ + V
Sbjct: 294 RFY-AAEIILGLEHMHNRFV--VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 350
Query: 288 ATRWYRAPEIMLNWMHYNQT 307
T Y APE++ + Y+ +
Sbjct: 351 GTHGYMAPEVLQKGVAYDSS 370
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 50 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 108
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 109 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 162
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 163 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 146 YMVTHLMGADLNNILRTQKL-SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
+++ + G DL+ L + S+ ++F +I+ GL+++H+ +++RDLKP+NI ++E
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH 328
Query: 205 CELKILDFGLARP-TENEMTGYVATRWYRAPEIMLNWMHYNQTG 247
++I D GLA ++ + V T Y APE++ + Y+ +
Sbjct: 329 GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 229 RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP-TENEMTGYV 287
R+Y A EI+L H + V ++DLKP+NI ++E ++I D GLA ++ + V
Sbjct: 295 RFY-AAEIILGLEHMHNRFV--VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 288 ATRWYRAPEIMLNWMHYNQT 307
T Y APE++ + Y+ +
Sbjct: 352 GTHGYMAPEVLQKGVAYDSS 371
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 89
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 90 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 143
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 89
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 90 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 143
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 29 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 87
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 88 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 141
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 142 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 146 YMVTHLMGADLNNILRTQKL-SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
+++ + G DL+ L + S+ ++F +I+ GL+++H+ +++RDLKP+NI ++E
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH 328
Query: 205 CELKILDFGLARP-TENEMTGYVATRWYRAPEIMLNWMHYNQTG 247
++I D GLA ++ + V T Y APE++ + Y+ +
Sbjct: 329 GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 229 RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP-TENEMTGYV 287
R+Y A EI+L H + V ++DLKP+NI ++E ++I D GLA ++ + V
Sbjct: 295 RFY-AAEIILGLEHMHNRFV--VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 288 ATRWYRAPEIMLNWMHYNQT 307
T Y APE++ + Y+ +
Sbjct: 352 GTHGYMAPEVLQKGVAYDSS 371
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 146 YMVTHLMGADLNNILRTQKL-SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
+++ + G DL+ L + S+ ++F +I+ GL+++H+ +++RDLKP+NI ++E
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH 328
Query: 205 CELKILDFGLARP-TENEMTGYVATRWYRAPEIMLNWMHYNQTG 247
++I D GLA ++ + V T Y APE++ + Y+ +
Sbjct: 329 GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 229 RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP-TENEMTGYV 287
R+Y A EI+L H + V ++DLKP+NI ++E ++I D GLA ++ + V
Sbjct: 295 RFY-AAEIILGLEHMHNRFV--VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 288 ATRWYRAPEIMLNWMHYNQT 307
T Y APE++ + Y+ +
Sbjct: 352 GTHGYMAPEVLQKGVAYDSS 371
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 28 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 86
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 87 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 140
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 141 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 32/175 (18%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRML-KHMNHENVIGLLDVFHSNTCLAD 141
A+ +G + A+K I + Q+ R +RE+ L + ++N++ L++ F +T
Sbjct: 31 GAVSLQNGKEYAVKIIEK--QAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDT---- 84
Query: 142 FKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI 199
Y+V + G+ L +I + + ++ +V + L ++H+ GI HRDLKP NI
Sbjct: 85 --RFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENI 142
Query: 200 AVNEDCE-------LKILDFGLARP----------TENEMTGYVATRWYRAPEIM 237
CE +KI DF L T E+T + Y APE++
Sbjct: 143 L----CESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIGLLDVFH 134
S +L L +G VA+K++ S +R + RE+++LK ++ + ++ V +
Sbjct: 25 SVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVSY 81
Query: 135 SNTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIH 191
+++ +V +L L + L+ + D + L+Y QI +G++Y+ S +H
Sbjct: 82 G----PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 137
Query: 192 RDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR-------WYRAPEIMLNWMHYN 244
RDL NI V + +KI DFGLA+ + YV WY APE + + +
Sbjct: 138 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSR 196
Query: 245 QTGV 248
Q+ V
Sbjct: 197 QSDV 200
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR-------WYRAPEIMLNWMHYN 305
+DL NI V + +KI DFGLA+ + YV WY APE + + +
Sbjct: 138 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSR 196
Query: 306 QTDIHQLNLIMEMLGT-------PPAEFMAKISSD 333
Q+D+ +++ L T P AEF+ + S+
Sbjct: 197 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSE 231
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 30 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 88
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 89 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 142
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+KY+ S +HRDL N ++E +K+ DFGLAR
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 12 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + + V L + I L ++ + +Q+L
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERMEPVQDL----FDFITERGALQEELARSFFWQVLEA 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 183
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 184 -WIRYHR 189
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIGLLDVFH 134
S +L L +G VA+K++ S +R + RE+++LK ++ + ++ V +
Sbjct: 38 SVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVSY 94
Query: 135 SNTCLADFKNVYMV-THLMGADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIH 191
+++ +V +L L + L+ + D + L+Y QI +G++Y+ S +H
Sbjct: 95 G----PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150
Query: 192 RDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR-------WYRAPEIMLNWMHYN 244
RDL NI V + +KI DFGLA+ + YV WY APE + + +
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSR 209
Query: 245 QTGV 248
Q+ V
Sbjct: 210 QSDV 213
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR-------WYRAPEIMLNWMHYN 305
+DL NI V + +KI DFGLA+ + YV WY APE + + +
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSR 209
Query: 306 QTDIHQLNLIMEMLGT-------PPAEFMAKISSD 333
Q+D+ +++ L T P AEF+ + +
Sbjct: 210 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE 244
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 123/351 (35%), Gaps = 93/351 (26%)
Query: 83 SALDSVSG-VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDV-----FHSN 136
LD G +VA+K I + A+ L+ +K + EN + + FH +
Sbjct: 37 ECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96
Query: 137 TCLADFKNVYMVTHLMGADLNNILRTQKLSD---DHVQFLVYQILRGLKYIHSAGIIHRD 193
C+A L+G + L+ HV+ + YQ+ L+++H + H D
Sbjct: 97 MCIA--------FELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTD 148
Query: 194 LKPSNIAV-----------NEDCE--------LKILDFGLARPTENEMTGYVATRWYRAP 234
LKP NI ++ CE +++ DFG A T VATR YR P
Sbjct: 149 LKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPP 208
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294
E+ IL+ G A+P + G + +YR
Sbjct: 209 EV---------------------------------ILELGWAQPCDVWSIGCILFEYYRG 235
Query: 295 PEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLL---TKKDFR 351
L H N+ L ++ ++LG P+ I +KY L+ D R
Sbjct: 236 --FTLFQTHENRE---HLVMMEKILGPIPSHM---IHRTRKQKYFYKGGLVWDENSSDGR 287
Query: 352 QVFKGANP-------------QAIXXXXXXXXXXXXKRITAEQALAHPYLS 389
V + P Q +RIT +AL HP+ +
Sbjct: 288 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 338
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
KVA+K + +P +V A E ++K + H+ ++ L V +Y++T
Sbjct: 213 TKVAVKTM-KPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVVTKEP-------IYIITE 262
Query: 151 LMG-ADLNNILRTQKLSDDHVQFLV---YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206
M L + L++ + S + L+ QI G+ +I IHRDL+ +NI V+
Sbjct: 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV 322
Query: 207 LKILDFGLARPTE-NEMTGYVATRW---YRAPEIM 237
KI DFGLAR E NE T ++ + APE +
Sbjct: 323 CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 357
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN-QT 307
+DL+ +NI V+ KI DFGLAR E NE T ++ + APE +N+ + ++
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-AINFGSFTIKS 366
Query: 308 DIHQLN-LIMEML 319
D+ L+ME++
Sbjct: 367 DVWSFGILLMEIV 379
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 84 ALDSVSG-VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDV-----FHSNT 137
LD G +VA+K I + A+ L+ +K + EN + + FH +
Sbjct: 70 CLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 129
Query: 138 CLADFKNVYMVTHLMGADLNNILRTQKLSD---DHVQFLVYQILRGLKYIHSAGIIHRDL 194
C+A L+G + L+ HV+ + YQ+ L+++H + H DL
Sbjct: 130 CIA--------FELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDL 181
Query: 195 KPSNIAV-----------NEDCE--------LKILDFGLARPTENEMTGYVATRWYRAPE 235
KP NI ++ CE +++ DFG A T VATR YR PE
Sbjct: 182 KPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPE 241
Query: 236 IML 238
++L
Sbjct: 242 VIL 244
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 23/98 (23%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAV-----------NEDCE--------LKILDFGLARP 278
L ++H NQ DLKP NI ++ CE +++ DFG A
Sbjct: 168 LRFLHENQ----LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 223
Query: 279 TENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM 316
T VATR YR PE++L D+ + I+
Sbjct: 224 DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCIL 261
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R +++G L + +F + + +D + + K+ + + + EL+
Sbjct: 24 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 83
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 84 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPE 138
Query: 165 ------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWM-APETIFDRVYTIQ 230
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 231 SDVWSFGVLL 240
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 123/351 (35%), Gaps = 93/351 (26%)
Query: 83 SALDSVSG-VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDV-----FHSN 136
LD G +VA+K I + A+ L+ +K + EN + + FH +
Sbjct: 46 ECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 105
Query: 137 TCLADFKNVYMVTHLMGADLNNILRTQKLSD---DHVQFLVYQILRGLKYIHSAGIIHRD 193
C+A L+G + L+ HV+ + YQ+ L+++H + H D
Sbjct: 106 MCIA--------FELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTD 157
Query: 194 LKPSNIAV-----------NEDCE--------LKILDFGLARPTENEMTGYVATRWYRAP 234
LKP NI ++ CE +++ DFG A T VATR YR P
Sbjct: 158 LKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPP 217
Query: 235 EIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294
E+ IL+ G A+P + G + +YR
Sbjct: 218 EV---------------------------------ILELGWAQPCDVWSIGCILFEYYRG 244
Query: 295 PEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLL---TKKDFR 351
L H N+ L ++ ++LG P+ I +KY L+ D R
Sbjct: 245 --FTLFQTHENRE---HLVMMEKILGPIPSHM---IHRTRKQKYFYKGGLVWDENSSDGR 296
Query: 352 QVFKGANP-------------QAIXXXXXXXXXXXXKRITAEQALAHPYLS 389
V + P Q +RIT +AL HP+ +
Sbjct: 297 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 347
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHV 170
RE+ + H+ H N++ + + FH D K +Y++ G + + + +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFH------DRKRIYLMLEFAPRGELYKELQKHGRFDEQRS 116
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 213
+ ++ L Y H +IHRD+KP N+ + ELKI DFG
Sbjct: 117 ATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 253 QDLKPSNIAVNEDCELKILDFG--LARPT--ENEMTGYVATRWYRAPEIMLNWMHYNQTD 308
+D+KP N+ + ELKI DFG + P+ M G T Y PE++ H + D
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYLPPEMIEGKTHDEKVD 194
Query: 309 IHQLNLIME--MLGTPPAEFMAKISSDSARKYIN 340
+ ++ ++G PP F + +++ R+ +N
Sbjct: 195 LWCAGVLCYEFLVGMPP--FDSPSHTETHRRIVN 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 66 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT-----GYVATR 229
Q+ L Y+ S +HRD+ N+ V+ + +K+ DFGL+R E+ G + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 230 WYRAPE 235
W APE
Sbjct: 178 WM-APE 182
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 40/180 (22%)
Query: 87 SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNV 145
S G VA+K++ F E+++L + H NVI ++ + F +
Sbjct: 36 SFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIR----YYCSETTDRF--L 84
Query: 146 YMVTHLMGADLNNILRTQKLSDDHVQF--------LVYQILRGLKYIHSAGIIHRDLKPS 197
Y+ L +L +++ ++ +SD++++ L+ QI G+ ++HS IIHRDLKP
Sbjct: 85 YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQ 144
Query: 198 NIAVN-------------EDCELKILDFGLARPTENEMTGY-------VATRWYRAPEIM 237
NI V+ E+ + I DFGL + ++ + + T +RAPE++
Sbjct: 145 NILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL 204
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 13 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 127
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 184
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 185 -WIRYHR 190
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 77 FDLIFSSALDSVSG---VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVF 133
F ++ L + SG V VAIK + + E ++ +H N+I L V
Sbjct: 57 FGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHNIIRLEGV- 114
Query: 134 HSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF--LVYQILRGLKYIHSAGII 190
++ +K + ++T M L+ LR + +Q ++ I G+KY+ + +
Sbjct: 115 -----ISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 191 HRDLKPSNIAVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPE 235
HRDL NI VN + K+ DFGL+R E++ G + RW APE
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW-TAPE 220
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIMLNWM 302
+ +DL NI VN + K+ DFGL+R E++ G + RW APE +
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW-TAPEAISYRK 226
Query: 303 HYNQTDIHQLNLIM 316
+ +D+ ++M
Sbjct: 227 FTSASDVWSFGIVM 240
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 31/204 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 84
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 85 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAP 139
Query: 165 -------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 140 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 199
Query: 218 TENEMTGYVATRWYRAPEIMLNWM 241
+ YV R P L WM
Sbjct: 200 IYKD-PDYVRKGDARLP---LKWM 219
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 174 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 232
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 233 SDVWSFGVLL 242
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 23/182 (12%)
Query: 58 YSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRM 117
Y EI + + + SF ++ V V I K+ P A R E+ +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRN--EVAV 85
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFL--V 174
L+ H N++ + + N+ +VT G+ L L Q+ Q +
Sbjct: 86 LRKTRHVNILLFMGYMTKD-------NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIA 138
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
Q +G+ Y+H+ IIHRD+K +NI ++E +KI DFGLA V +RW +
Sbjct: 139 RQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT---------VKSRWSGSQ 189
Query: 235 EI 236
++
Sbjct: 190 QV 191
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 31/204 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 119
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 120 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 174
Query: 165 -------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 175 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234
Query: 218 TENEMTGYVATRWYRAPEIMLNWM 241
+ YV R P L WM
Sbjct: 235 IYKD-PDYVRKGDARLP---LKWM 254
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 267
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 268 SDVWSFGVLL 277
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 35 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 93
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 94 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 149
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 150 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 206
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 207 -WIRYHR 212
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 28 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 142
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 199
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 200 -WIRYHR 205
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 47 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 105
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 161
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 162 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 218
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 219 -WIRYHR 224
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 13 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 127
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 184
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 185 -WIRYHR 190
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 28 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 142
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 199
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 200 -WIRYHR 205
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 13 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 127
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 184
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 185 -WIRYHR 190
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 27 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 141
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 198
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 199 -WIRYHR 204
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 26/177 (14%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN-----------VIGLLDV 132
A D V+ VA+K I R V+ + E+++L+ +N + ++ LLD
Sbjct: 38 AKDMVNNTHVAMK-IVR--GDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD- 93
Query: 133 FHSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHS-AG 188
H N + +V MV ++G +L +++ + + +V+ + Q+L GL Y+H G
Sbjct: 94 -HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 152
Query: 189 IIHRDLKPSNIAVN------EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 239
IIH D+KP N+ + ++KI D G A + T + TR YR+PE++L
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG 209
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 41 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 155
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 212
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 213 -WIRYHR 218
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 84
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 85 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPED 139
Query: 165 -----LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 140 LYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWM-APETIFDRVYTIQ 230
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 231 SDVWSFGVLL 240
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 40 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 154
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 211
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 212 -WIRYHR 217
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 26/177 (14%)
Query: 84 ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN-----------VIGLLDV 132
A D V+ VA+K I R V+ + E+++L+ +N + ++ LLD
Sbjct: 38 AKDMVNNTHVAMK-IVR--GDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD- 93
Query: 133 FHSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHS-AG 188
H N + +V MV ++G +L +++ + + +V+ + Q+L GL Y+H G
Sbjct: 94 -HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 152
Query: 189 IIHRDLKPSNIAVN------EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 239
IIH D+KP N+ + ++KI D G A + T + TR YR+PE++L
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG 209
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 28 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 142
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 199
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 200 -WIRYHR 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
++ AIK ++R + RE +++ +NH NV+ L+ + L YM
Sbjct: 50 IQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCH- 107
Query: 151 LMGADLNNILRTQKLS---DDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
DL +R+ + + D + F + Q+ RG++Y+ +HRDL N ++E +
Sbjct: 108 ---GDLLQFIRSPQRNPTVKDLISFGL-QVARGMEYLAEQKFVHRDLAARNCMLDESFTV 163
Query: 208 KILDFGLARPTENEMTGYVATRWYRAPEIMLNW 240
K+ DFGLAR + Y + + +R + + W
Sbjct: 164 KVADFGLARDILDR--EYYSVQQHRHARLPVKW 194
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301
F +DL N ++E +K+ DFGLAR + Y + + +R + + W
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDR--EYYSVQQHRHARLPVKW 194
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTY-RELRMLKHMNHENV 126
G + + F +++ +++ + VA+KK+A + K+ + +E++++ HEN+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92
Query: 127 IGLLDVFHSNT---CLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLK 182
+ LL F S+ CL VYM + L+ + T LS H++ + Q G+
Sbjct: 93 VELLG-FSSDGDDLCLV---YVYMPNGSLLDRLSCLDGTPPLSW-HMRCKIAQGAANGIN 147
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN-----EMTGYVATRWYRAPEIM 237
++H IHRD+K +NI ++E KI DFGLAR +E + V T Y APE +
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTEN-----EMTGYVATRWY 292
+N++H N +D+K +NI ++E KI DFGLAR +E + V T Y
Sbjct: 146 INFLHENH----HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 293 RAPEIMLNWMHYNQTDIHQLNLI-MEMLGTPPA 324
APE + + ++DI+ ++ +E++ PA
Sbjct: 202 MAPEALRGEI-TPKSDIYSFGVVLLEIITGLPA 233
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 27 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 141
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 198
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 199 -WIRYHR 204
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 12 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 126
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 183
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 184 -WIRYHR 189
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 40 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 154
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 211
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 212 -WIRYHR 217
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 81/216 (37%), Gaps = 37/216 (17%)
Query: 54 FNQPYSEICRGVIDIGPTLSKESFDLIFSSA---LDSVSGVKVAIKKIARPFQSAVHAKR 110
P E R + +G TL + F + + L +G K+ + S +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK------ 164
E +LK +NH +VI L C D + +V + L LR +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLY-----GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 165 -------------------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
L+ + +QI +G++Y+ ++HRDL NI V E
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR 187
Query: 206 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 241
++KI DFGL+R E YV R P + WM
Sbjct: 188 KMKISDFGLSRDVYEE-DSYVKRSQGRIP---VKWM 219
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT------GYVATRWYRAPEIMLNWMHYNQ 306
+DL NI V E ++KI DFGL+R E + G + +W A E + + ++ Q
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM-AIESLFDHIYTTQ 232
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 233 SDVWSFGVLL 242
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 148
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 149 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 202
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+K++ S +HRDL N ++E +K+ DFGLAR
Sbjct: 203 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 40 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 154
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 211
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 212 -WIRYHR 217
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED---CELKILDFGLARPTE 219
+ +S++ V L+ QIL G+ Y+H I+H DLKP NI ++ ++KI+DFG++R
Sbjct: 126 EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG 185
Query: 220 N--EMTGYVATRWYRAPEIM 237
+ E+ + T Y APEI+
Sbjct: 186 HACELREIMGTPEYLAPEIL 205
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 254 DLKPSNIAVNED---CELKILDFGLARPTEN--EMTGYVATRWYRAPEIMLNWMHYNQTD 308
DLKP NI ++ ++KI+DFG++R + E+ + T Y APEI+ TD
Sbjct: 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATD 215
Query: 309 IHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXX 368
+ + +I ML T + F+ + D+ Y+N + + + F + A
Sbjct: 216 MWNIGIIAYMLLTHTSPFVGE---DNQETYLN-ISQVNVDYSEETFSSVSQLATDFIQSL 271
Query: 369 XXXXXXKRITAEQALAHPYLSQYSDPN 395
KR TAE L+H +L Q+ N
Sbjct: 272 LVKNPEKRPTAEICLSHSWLQQWDFEN 298
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 41 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 155
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 212
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 213 -WIRYHR 218
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 31/204 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 83 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137
Query: 165 -------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 218 TENEMTGYVATRWYRAPEIMLNWM 241
+ YV R P L WM
Sbjct: 198 IYKD-PDYVRKGDARLP---LKWM 217
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 230
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 231 SDVWSFGVLL 240
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 41 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 155
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 212
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 213 -WIRYHR 218
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 40 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 154
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 211
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 212 -WIRYHR 217
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 22/188 (11%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKI-ARPFQSA--VHAKRTYRELRMLKHM 121
V ++ + K +F ++ ++ +G + A+K + F S+ + + RE + +
Sbjct: 25 VYELCEVIGKGAFSVV-RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 122 NHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLN-NILRTQK----LSDDHVQFLVY 175
H +++ LL+ + S+ L YMV M GADL I++ S+ +
Sbjct: 84 KHPHIVELLETYSSDGML------YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLA-RPTENEMT--GYVATR 229
QIL L+Y H IIHRD+KP N+ + +K+ DFG+A + E+ + G V T
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 230 WYRAPEIM 237
+ APE++
Sbjct: 198 HFMAPEVV 205
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 446 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM-----TGYVATR 229
Q+ L Y+ S +HRD+ N+ V+ + +K+ DFGL+R E+ G + +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 230 WYRAPE 235
W APE
Sbjct: 558 WM-APE 562
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 89
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 90 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 143
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+K++ S +HRDL N ++E +K+ DFGLAR
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 55 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 169
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 226
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 227 -WIRYHR 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLN---NILRTQKLSDDHV 170
E ++L+ +N V+ L + + L ++T + G DL + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALC-----LVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA--RPTENEMTGYVAT 228
F +I GL+ +H I++RDLKP NI +++ ++I D GLA P + G V T
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 229 RWYRAPEIMLN 239
Y APE++ N
Sbjct: 349 VGYMAPEVVKN 359
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLA--RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
++DLKP NI +++ ++I D GLA P + G V T Y APE++ N + D
Sbjct: 309 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDW 368
Query: 310 HQLN-LIMEMLG--TPPAEFMAKISSDSARKYINSLP 343
L L+ EM+ +P + KI + + + +P
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 94 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKYSLDLASLILYA 145
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM-----TGYVATR 229
Q+ L Y+ S +HRD+ N+ V+ + +K+ DFGL+R E+ G + +
Sbjct: 146 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 230 WYRAPE 235
W APE
Sbjct: 206 WM-APE 210
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 55 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 169
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 226
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 227 -WIRYHR 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 40/229 (17%)
Query: 54 FNQPYSEICRGVIDIGPTLSKESFDLIFSSA---LDSVSGVKVAIKKIARPFQSAVHAKR 110
P E R + +G TL + F + + L +G K+ + S +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK------ 164
E +LK +NH +VI L C D + +V + L LR +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLY-----GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 165 -------------------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
L+ + +QI +G++Y+ ++HRDL NI V E
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGR 187
Query: 206 ELKILDFGLARPTENEMT------GYVATRWYRAPEIMLNWMHYNQTGV 248
++KI DFGL+R E + G + +W A E + + ++ Q+ V
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM-AIESLFDHIYTTQSDV 235
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT------GYVATRWYRAPEIMLNWMHYNQ 306
+DL NI V E ++KI DFGL+R E + G + +W A E + + ++ Q
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM-AIESLFDHIYTTQ 232
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 233 SDVWSFGVLL 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 60 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 118
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 119 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 174
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 175 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 231
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 232 -WIRYHR 237
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 41 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 155
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 212
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 213 -WIRYHR 218
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 71 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKYSLDLASLILYA 122
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM-----TGYVATR 229
Q+ L Y+ S +HRD+ N+ V+ + +K+ DFGL+R E+ G + +
Sbjct: 123 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 230 WYRAPE 235
W APE
Sbjct: 183 WM-APE 187
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 36 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 94
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 95 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 148
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+K++ S +HRDL N ++E +K+ DFGLAR
Sbjct: 149 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 83 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137
Query: 165 -------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWM-APETIFDRVYTIQ 230
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 231 SDVWSFGVLL 240
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLN---NILRTQKLSDDHV 170
E ++L+ +N V+ L + + L ++T + G DL + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALC-----LVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA--RPTENEMTGYVAT 228
F +I GL+ +H I++RDLKP NI +++ ++I D GLA P + G V T
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 229 RWYRAPEIMLN 239
Y APE++ N
Sbjct: 349 VGYMAPEVVKN 359
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 252 FQDLKPSNIAVNEDCELKILDFGLA--RPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
++DLKP NI +++ ++I D GLA P + G V T Y APE++ N + D
Sbjct: 309 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDW 368
Query: 310 HQLN-LIMEMLG--TPPAEFMAKISSDSARKYINSLP 343
L L+ EM+ +P + KI + + + +P
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 66 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM-----TGYVATR 229
Q+ L Y+ S +HRD+ N+ V+ + +K+ DFGL+R E+ G + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 230 WYRAPE 235
W APE
Sbjct: 178 WM-APE 182
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 74 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 165 -------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 163 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWM-APETIFDRVYTIQ 221
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 222 SDVWSFGVLL 231
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 68 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKYSLDLASLILYA 119
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM-----TGYVATR 229
Q+ L Y+ S +HRD+ N+ V+ + +K+ DFGL+R E+ G + +
Sbjct: 120 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 179
Query: 230 WYRAPE 235
W APE
Sbjct: 180 WM-APE 184
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 66 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM-----TGYVATR 229
Q+ L Y+ S +HRD+ N+ V+ + +K+ DFGL+R E+ G + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 230 WYRAPE 235
W APE
Sbjct: 178 WM-APE 182
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 63 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKYSLDLASLILYA 114
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM-----TGYVATR 229
Q+ L Y+ S +HRD+ N+ V+ + +K+ DFGL+R E+ G + +
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174
Query: 230 WYRAPE 235
W APE
Sbjct: 175 WM-APE 179
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSS---ALDSVSGVKVAIKKIARPFQSAVHAKRTYRELR 116
E R + +G L + +F + + +D + + K+ + + + EL+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 117 MLKHMNHE-NVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK---------- 164
+L H+ H NV+ LL C + ++ +L+ LR+++
Sbjct: 83 ILIHIGHHLNVVNLL-----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137
Query: 165 -------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWM-APETIFDRVYTIQ 230
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 231 SDVWSFGVLL 240
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 69 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKYSLDLASLILYA 120
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM-----TGYVATR 229
Q+ L Y+ S +HRD+ N+ V+ + +K+ DFGL+R E+ G + +
Sbjct: 121 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 180
Query: 230 WYRAPE 235
W APE
Sbjct: 181 WM-APE 185
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 32 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 90
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 91 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 144
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+K++ S +HRDL N ++E +K+ DFGLAR
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 109 KRTYRELRMLKHMNHENVIGLLD---VFHSNTCLADFKNVYMVTHLM-GADLNNILRTQK 164
K Y E + + +++G D + H + K V +VT M L+ L+
Sbjct: 59 KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND 118
Query: 165 LSDDHVQF--LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222
+Q ++ I G+KY+ G +HRDL NI +N + K+ DFGL+R E++
Sbjct: 119 GQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 223 TGYVATRWYRAP 234
TR + P
Sbjct: 179 EAAYTTRGGKIP 190
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIMLNWM 302
+ +DL NI +N + K+ DFGL+R E++ G + RW APE +
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAFRK 203
Query: 303 HYNQTDIHQLNLIM 316
+ +D+ ++M
Sbjct: 204 FTSASDVWSYGIVM 217
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 8 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 122
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 179
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 180 -WIRYHR 185
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVAIK I + A+ + E ++ ++H ++ L V CL + +VT
Sbjct: 34 KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV-----CLEQ-APICLVTEF 84
Query: 152 MG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
M L++ LRTQ+ + + + + + G+ Y+ A +IHRDL N V E+ +K
Sbjct: 85 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIK 144
Query: 209 ILDFGLARPT-ENEMTGYVATRW---YRAPEIM 237
+ DFG+ R +++ T T++ + +PE+
Sbjct: 145 VSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 177
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL N V E+ +K+ DFG+ R +++ T T++ + +PE+ + +++D
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 309 IHQLNLIM 316
+ ++M
Sbjct: 188 VWSFGVLM 195
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 29 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 87
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 88 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 141
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+K++ S +HRDL N ++E +K+ DFGLAR
Sbjct: 142 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 11 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 69
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 70 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 125
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 182
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 183 -WIRYHR 188
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 32 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 90
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 91 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 144
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+K++ S +HRDL N ++E +K+ DFGLAR
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 21/138 (15%)
Query: 90 GVKVAIKKIARPFQSAVHAKRT---YRELRMLKHMNHENVIGLLDVFHSNTCLA------ 140
G VA+K + + HA+R RE+ ++K + H N++ + L+
Sbjct: 60 GSDVAVKIL---MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYL 116
Query: 141 DFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAG--IIHRDLKPSN 198
++Y + H GA ++L + + Y + +G+ Y+H+ I+HRDLK N
Sbjct: 117 SRGSLYRLLHKSGA-------REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPN 169
Query: 199 IAVNEDCELKILDFGLAR 216
+ V++ +K+ DFGL+R
Sbjct: 170 LLVDKKYTVKVCDFGLSR 187
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRA 294
+N++H P +DLK N+ V++ +K+ DFGL+R + T + A
Sbjct: 150 MNYLHNRNP--PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMA 207
Query: 295 PEIMLNWMHYNQTDIHQLNLIMEMLGT 321
PE++ + ++D++ +I+ L T
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 8 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 122
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 179
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 180 -WIRYHR 185
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 125/340 (36%), Gaps = 83/340 (24%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+ ++ ++ + A+K I + Q R +RE+ ML G +V +
Sbjct: 31 TCINLITSQEYAVKIIEK--QPGHIRSRVFREVEMLYQCQ-----GHRNVLELIEFFEEE 83
Query: 143 KNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIA 200
Y+V M G+ L++I + + ++ +V + L ++H+ GI HRDLKP NI
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 201 V---NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
N+ +KI DFGL
Sbjct: 144 CEHPNQVSPVKICDFGLG------------------------------------------ 161
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-----MHYNQTDIHQL 312
S I +N DC ++ P E+ + Y APE++ + ++ + D+ L
Sbjct: 162 SGIKLNGDCS------PISTP---ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 313 NLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGA-----------NP 359
+I+ +L G PP F+ + SD + P F + +G +
Sbjct: 213 GVILYILLSGYPP--FVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISC 270
Query: 360 QAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPT 399
A +R++A Q L HP++ + N PT
Sbjct: 271 AAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPT 310
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 65 VIDIGPTLSKESFDLIFSSALDSVSGVKV--AIKKIARPFQSAVHAKRTYRELRMLKHMN 122
++ + + F ++ L G K+ A+K + R + E ++K +
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFS 89
Query: 123 HENVIGLLDVFHSNTCL-ADFKNVYMVTHLMGADLNNILRTQKLS---DDHVQFLVYQIL 178
H NV+ LL + CL ++ + ++ ++ DL N +R + + D + F + Q+
Sbjct: 90 HPNVLSLLGI-----CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVA 143
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+G+K++ S +HRDL N ++E +K+ DFGLAR
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 40/229 (17%)
Query: 54 FNQPYSEICRGVIDIGPTLSKESFDLIFSSA---LDSVSGVKVAIKKIARPFQSAVHAKR 110
P E R + +G TL + F + + L +G K+ + S +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 111 TYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK------ 164
E +LK +NH +VI L C D + +V + L LR +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLY-----GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 165 -------------------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
L+ + +QI +G++Y+ ++HRDL NI V E
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR 187
Query: 206 ELKILDFGLARPTENEMT------GYVATRWYRAPEIMLNWMHYNQTGV 248
++KI DFGL+R E + G + +W A E + + ++ Q+ V
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM-AIESLFDHIYTTQSDV 235
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENEMT------GYVATRWYRAPEIMLNWMHYNQ 306
+DL NI V E ++KI DFGL+R E + G + +W A E + + ++ Q
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM-AIESLFDHIYTTQ 232
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 233 SDVWSFGVLL 242
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTY-RELRMLKHMNHENV 126
G + + F +++ +++ + VA+KK+A + K+ + +E++++ HEN+
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 86
Query: 127 IGLLDVFHSNT---CLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLK 182
+ LL F S+ CL VYM + L+ + T LS H++ + Q G+
Sbjct: 87 VELLG-FSSDGDDLCLV---YVYMPNGSLLDRLSCLDGTPPLSW-HMRCKIAQGAANGIN 141
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN-----EMTGYVATRWYRAPEIM 237
++H IHRD+K +NI ++E KI DFGLAR +E V T Y APE +
Sbjct: 142 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTEN-----EMTGYVATRWY 292
+N++H N +D+K +NI ++E KI DFGLAR +E V T Y
Sbjct: 140 INFLHENH----HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 293 RAPEIMLNWMHYNQTDIHQLNLI-MEMLGTPPA 324
APE + + ++DI+ ++ +E++ PA
Sbjct: 196 MAPEALRGEI-TPKSDIYSFGVVLLEIITGLPA 227
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTY-RELRMLKHMNHENV 126
G + + F +++ +++ + VA+KK+A + K+ + +E++++ HEN+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92
Query: 127 IGLLDVFHSNT---CLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLK 182
+ LL F S+ CL VYM + L+ + T LS H++ + Q G+
Sbjct: 93 VELLG-FSSDGDDLCLV---YVYMPNGSLLDRLSCLDGTPPLSW-HMRCKIAQGAANGIN 147
Query: 183 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN-----EMTGYVATRWYRAPEIM 237
++H IHRD+K +NI ++E KI DFGLAR +E V T Y APE +
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTEN-----EMTGYVATRWY 292
+N++H N +D+K +NI ++E KI DFGLAR +E V T Y
Sbjct: 146 INFLHENH----HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAY 201
Query: 293 RAPEIMLNWMHYNQTDIHQLNLI-MEMLGTPPA 324
APE + + ++DI+ ++ +E++ PA
Sbjct: 202 MAPEALRGEI-TPKSDIYSFGVVLLEIITGLPA 233
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVAIK I + A+ + E ++ ++H ++ L V CL + +
Sbjct: 33 KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV-----CLEQAPICLVFEFM 84
Query: 152 MGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L++ LRTQ+ + + + + + G+ Y+ A +IHRDL N V E+ +K+
Sbjct: 85 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKV 144
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIM 237
DFG+ R +++ T T++ + +PE+
Sbjct: 145 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 176
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL N V E+ +K+ DFG+ R +++ T T++ + +PE+ + +++D
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 309 IHQLNLIM 316
+ ++M
Sbjct: 187 VWSFGVLM 194
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRT-YRELRMLKHM--------NHENVIGLLDVFHSNTC 138
+ G K K+ + SA H T E+R+LK + N E V+ LLD F +
Sbjct: 43 IQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG- 98
Query: 139 LADFKNVYMVTHLMGADL-NNILRT--QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDL 194
+ ++ MV ++G L I+++ Q L V+ ++ Q+L+GL Y+H+ IIH D+
Sbjct: 99 -VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDI 157
Query: 195 KPSNI--AVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVP 249
KP NI +VNE ++ A TE + +G + AP N
Sbjct: 158 KPENILLSVNEQYIRRLA----AEATEWQRSGAPPPSGSAVSTAPATAGN---------- 203
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
F L+P N E ++KI D G A T + TR YR+ E+++ + DI
Sbjct: 204 FLVNPLEPKNA---EKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADI 260
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 66 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFGLARPTENEM-----TGYVAT 228
Q+ L Y+ S +HRD+ N+ V+ DC +K+ DFGL+R E+ G +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATDC-VKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 229 RWYRAPE 235
+W APE
Sbjct: 177 KWM-APE 182
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 88 VSGVKVAIKKIARPFQSAVHAKRT-YRELRMLKHM--------NHENVIGLLDVFHSNTC 138
+ G K K+ + SA H T E+R+LK + N E V+ LLD F +
Sbjct: 59 IQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG- 114
Query: 139 LADFKNVYMVTHLMGADL-NNILRT--QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDL 194
+ ++ MV ++G L I+++ Q L V+ ++ Q+L+GL Y+H+ IIH D+
Sbjct: 115 -VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDI 173
Query: 195 KPSNI--AVNEDCELKILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYNQTGVP 249
KP NI +VNE ++ A TE + +G + AP N
Sbjct: 174 KPENILLSVNEQYIRRLA----AEATEWQRSGAPPPSGSAVSTAPATAGN---------- 219
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309
F L+P N E ++KI D G A T + TR YR+ E+++ + DI
Sbjct: 220 FLVNPLEPKNA---EKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADI 276
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP----FQSAVHAKRTYRELRMLKHMNH 123
+GP L F ++S S + VAIK + + + + R E+ +LK ++
Sbjct: 8 VGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 124 --ENVIGLLDVFHS-NTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180
VI LLD F ++ + + V L + I L ++ + +Q+L
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDL----FDFITERGALQEELARSFFWQVLEA 122
Query: 181 LKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM-TGYVATRWYRAPEIML 238
+++ H+ G++HRD+K NI ++ + ELK++DFG ++ + T + TR Y PE
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE--- 179
Query: 239 NWMHYNQ 245
W+ Y++
Sbjct: 180 -WIRYHR 185
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 45/175 (25%)
Query: 108 AKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-----------GADL 156
+R E+R++K ++H N+ L +V+ + + HL+ G
Sbjct: 72 VERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCA 131
Query: 157 NNILRTQ-------------------KLSDDHVQF------LVYQILRGLKYIHSAGIIH 191
++++TQ + S D VQ ++ QI L Y+H+ GI H
Sbjct: 132 MDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICH 191
Query: 192 RDLKPSN--IAVNEDCELKILDFGLARP----TENE---MTGYVATRWYRAPEIM 237
RD+KP N + N+ E+K++DFGL++ E MT T ++ APE++
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 253 QDLKPSNI--AVNEDCELKILDFGLARP----TENE---MTGYVATRWYRAPEIM--LNW 301
+D+KP N + N+ E+K++DFGL++ E MT T ++ APE++ N
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE 251
Query: 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQA 361
+ + D +++ +L F +D+ + +N ++ + +P A
Sbjct: 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL----SPLA 307
Query: 362 IXXXXXXXXXXXXKRITAEQALAHPYLSQYSD 393
+R A +AL HP++SQ+SD
Sbjct: 308 RDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 30/207 (14%)
Query: 46 PSRRLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQ 103
P+R +H Q E+ I I + F + S L V VAIK +
Sbjct: 29 PNRAVH----QFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL----- 79
Query: 104 SAVHAKRTYRELRMLKHMNHENVIGLLD---VFHSNTCLADFKNVYMVTHLM-GADLNNI 159
K Y E + + +++G D V H + K V +V M L+
Sbjct: 80 -----KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAF 134
Query: 160 LRTQKLSDDHVQF--LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217
LR +Q ++ I G++Y+ G +HRDL NI VN + K+ DFGL+R
Sbjct: 135 LRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 194
Query: 218 TENE-------MTGYVATRWYRAPEIM 237
E++ G + RW APE +
Sbjct: 195 IEDDPEAVYTTTGGKIPVRW-TAPEAI 220
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIMLNWM 302
+ +DL NI VN + K+ DFGL+R E++ G + RW APE +
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-TAPEAIQYRK 224
Query: 303 HYNQTDIHQLNLIM 316
+ +D+ ++M
Sbjct: 225 FTSASDVWSYGIVM 238
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVAIK I + A+ + E ++ ++H ++ L V CL + +
Sbjct: 33 KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV-----CLEQAPICLVFEFM 84
Query: 152 MGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L++ LRTQ+ + + + + + G+ Y+ A +IHRDL N V E+ +K+
Sbjct: 85 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 144
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIM 237
DFG+ R +++ T T++ + +PE+
Sbjct: 145 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 176
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL N V E+ +K+ DFG+ R +++ T T++ + +PE+ + +++D
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 309 IHQLNLIM 316
+ ++M
Sbjct: 187 VWSFGVLM 194
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRM 117
EI R I++G + + F + S + VAIK +V K L M
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY- 175
+ +H +++ L+ V N V+++ L +L + L+ +K S D ++Y
Sbjct: 446 -RQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 176 -QILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFGLARPTENEM-----TGYVAT 228
Q+ L Y+ S +HRD+ N+ V+ DC +K+ DFGL+R E+ G +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATDC-VKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 229 RWYRAPE 235
+W APE
Sbjct: 557 KWM-APE 562
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVAIK I + A+ + E ++ ++H ++ L V CL + +
Sbjct: 36 KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV-----CLEQAPICLVFEFM 87
Query: 152 MGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L++ LRTQ+ + + + + + G+ Y+ A +IHRDL N V E+ +K+
Sbjct: 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 147
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIM 237
DFG+ R +++ T T++ + +PE+
Sbjct: 148 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 179
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL N V E+ +K+ DFG+ R +++ T T++ + +PE+ + +++D
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 309 IHQLNLIM 316
+ ++M
Sbjct: 190 VWSFGVLM 197
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 20/187 (10%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L F ++ + KVAIK + +P + + E +++K
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNG--NTKVAIKTL-KP--GTMSPESFLEEAQIMK 59
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILR---TQKLSDDHVQFLVY 175
+ H+ ++ L V +Y+VT M L + L+ + L ++ +
Sbjct: 60 KLKHDKLVQLYAVVSEEP-------IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAA 112
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---Y 231
Q+ G+ YI IHRDL+ +NI V KI DFGLAR E NE T ++ +
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW 172
Query: 232 RAPEIML 238
APE L
Sbjct: 173 TAPEAAL 179
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRW---YRAPEIMLNWMHYN 305
+ +DL+ +NI V KI DFGLAR E NE T ++ + APE L
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 306 QTDIHQLNLIMEMLGT 321
++D+ +++ L T
Sbjct: 186 KSDVWSFGILLTELVT 201
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 40/180 (22%)
Query: 87 SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNV 145
S G VA+K++ F E+++L + H NVI ++ + F +
Sbjct: 36 SFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIR----YYCSETTDRF--L 84
Query: 146 YMVTHLMGADLNNILRTQKLSDDHVQF--------LVYQILRGLKYIHSAGIIHRDLKPS 197
Y+ L +L +++ ++ +SD++++ L+ QI G+ ++HS IIHRDLKP
Sbjct: 85 YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQ 144
Query: 198 NIAVN-------------EDCELKILDFGLARPTENEMTGY-------VATRWYRAPEIM 237
NI V+ E+ + I DFGL + ++ + T +RAPE++
Sbjct: 145 NILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVAIK I + A+ + E ++ ++H ++ L V CL + +
Sbjct: 31 KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV-----CLEQAPICLVFEFM 82
Query: 152 MGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L++ LRTQ+ + + + + + G+ Y+ A +IHRDL N V E+ +K+
Sbjct: 83 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 142
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIM 237
DFG+ R +++ T T++ + +PE+
Sbjct: 143 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 174
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL N V E+ +K+ DFG+ R +++ T T++ + +PE+ + +++D
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 309 IHQLNLIM 316
+ ++M
Sbjct: 185 VWSFGVLM 192
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 22/190 (11%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIAR-------PFQSAVHAKRTYREL-RMLK 119
+GP L K F +F+ ++VAIK I R P +V L ++
Sbjct: 35 LGPLLGKGGFGTVFAGH-RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADL-NNILRTQKLSDDHVQFLVYQIL 178
H VI LLD F + + + L DL + I L + + Q++
Sbjct: 94 GGGHPGVIRLLDWFETQEGFM----LVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVV 149
Query: 179 RGLKYIHSAGIIHRDLKPSNIAVN--EDCELKILDFGLARPTENE-MTGYVATRWYRAPE 235
+++ HS G++HRD+K NI ++ C K++DFG +E T + TR Y PE
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILIDLRRGCA-KLIDFGSGALLHDEPYTDFDGTRVYSPPE 208
Query: 236 IMLNWMHYNQ 245
W+ +Q
Sbjct: 209 ----WISRHQ 214
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN 125
++IG + K F ++ +VAI+ I + K RE+ + HEN
Sbjct: 35 LEIGELIGKGRFGQVYHGRWHG----EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHEN 90
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDD--HVQFLVYQILRGLKY 183
V V C++ + + G L +++R K+ D + + +I++G+ Y
Sbjct: 91 V-----VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGY 145
Query: 184 IHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
+H+ GI+H+DLK N+ ++ ++ I DFGL
Sbjct: 146 LHAKGILHKDLKSKNV-FYDNGKVVITDFGL 175
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 28/121 (23%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQF--------LVYQILRGLKYIHSAGIIHRDLKP 196
+Y+ L +L +++ ++ +SD++++ L+ QI G+ ++HS IIHRDLKP
Sbjct: 102 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKP 161
Query: 197 SNIAVN-------------EDCELKILDFGLARPTENEMTGY-------VATRWYRAPEI 236
NI V+ E+ + I DFGL + ++ + T +RAPE+
Sbjct: 162 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPEL 221
Query: 237 M 237
+
Sbjct: 222 L 222
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 28/121 (23%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQF--------LVYQILRGLKYIHSAGIIHRDLKP 196
+Y+ L +L +++ ++ +SD++++ L+ QI G+ ++HS IIHRDLKP
Sbjct: 102 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKP 161
Query: 197 SNIAVN-------------EDCELKILDFGLARPTENEMTGY-------VATRWYRAPEI 236
NI V+ E+ + I DFGL + ++ + T +RAPE+
Sbjct: 162 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPEL 221
Query: 237 M 237
+
Sbjct: 222 L 222
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 63/290 (21%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126
+I + K SF + A D V VAIK I + E+R+L+ MN +
Sbjct: 38 EIDSLIGKGSFGQVVK-AYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLELMNKHDT 93
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKY 183
+ H ++ +V ++ +L ++LR + +S + + Q+ L +
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 153
Query: 184 IHSA--GIIHRDLKPSNIAVN--EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 239
+ + IIH DLKP NI + + +KI+DFG + + + +R+YR+PE++L
Sbjct: 154 LATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLL- 212
Query: 240 WMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299
G+P+ D + + G +L
Sbjct: 213 -------GMPY--------------DLAIDMWSLG----------------------CIL 229
Query: 300 NWMHYNQ------TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP 343
MH + ++ Q+N I+E+LG PPA + + + ARK+ LP
Sbjct: 230 VEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQ--APKARKFFEKLP 277
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 63/290 (21%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126
+I + K SF + A D V VAIK I + E+R+L+ MN +
Sbjct: 57 EIDSLIGKGSFGQVVK-AYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLELMNKHDT 112
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKY 183
+ H ++ +V ++ +L ++LR + +S + + Q+ L +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 184 IHSA--GIIHRDLKPSNIAVN--EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 239
+ + IIH DLKP NI + + +KI+DFG + + + +R+YR+PE++L
Sbjct: 173 LATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLL- 231
Query: 240 WMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299
G+P+ D + + G +L
Sbjct: 232 -------GMPY--------------DLAIDMWSLG----------------------CIL 248
Query: 300 NWMHYNQ------TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP 343
MH + ++ Q+N I+E+LG PPA + + + ARK+ LP
Sbjct: 249 VEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQ--APKARKFFEKLP 296
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 26/133 (19%)
Query: 109 KRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF--------------KNVYMVTHLMGA 154
++ RE++ L ++H N++ H N C F K + +
Sbjct: 49 EKAEREVKALAKLDHVNIV------HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFC 102
Query: 155 DLNNI------LRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
D + R +KL L QI +G+ YIHS +I+RDLKPSNI + + ++K
Sbjct: 103 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK 162
Query: 209 ILDFGLARPTENE 221
I DFGL +N+
Sbjct: 163 IGDFGLVTSLKND 175
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE--MTGYVATRWYRAPEIMLNWMHYNQTDIH 310
+DLKPSNI + + ++KI DFGL +N+ T Y +PE + + + + D++
Sbjct: 146 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLY 205
Query: 311 QLNLIMEML 319
L LI+ L
Sbjct: 206 ALGLILAEL 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 93 VAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
VAIK + + +R + E ++ +H NVI L V +T V ++T
Sbjct: 64 VAIKTLKSGYTE--KQRRDFLSEASIMGQFDHPNVIHLEGVVTKST------PVMIITEF 115
Query: 152 M-GADLNNILRTQKLSDDHVQF--LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
M L++ LR +Q ++ I G+KY+ +HRDL NI VN + K
Sbjct: 116 MENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCK 175
Query: 209 ILDFGLARPTENE---------MTGYVATRWYRAPE 235
+ DFGL+R E++ + G + RW APE
Sbjct: 176 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPE 210
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENE---------MTGYVATRWYRAPEIMLN 300
+ +DL NI VN + K+ DFGL+R E++ + G + RW APE +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPEAIQY 214
Query: 301 WMHYNQTDIHQLNLIM 316
+ +D+ ++M
Sbjct: 215 RKFTSASDVWSYGIVM 230
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
EI R + + L F ++ + + + KVA+K + +P +V A E ++K
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHT--KVAVKTM-KPGSMSVEA--FLAEANVMK 232
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLV---Y 175
+ H+ ++ L V +Y++T M L + L++ + S + L+
Sbjct: 233 TLQHDKLVKLHAVVTKEP-------IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 285
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI G+ +I IHRDL+ +NI V+ KI DFGLAR
Sbjct: 286 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 326
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLAR 277
+DL+ +NI V+ KI DFGLAR
Sbjct: 302 RDLRAANILVSASLVCKIADFGLAR 326
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L F ++ S + VA+K + + + + +E ++K
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 62
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRT---QKLSDDHVQFLVY 175
+ H N++ LL V C + Y++T M +L + LR Q++S + ++
Sbjct: 63 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRW---Y 231
QI ++Y+ IHRDL N V E+ +K+ DFGL+R T + T + ++ +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 232 RAPE 235
APE
Sbjct: 177 TAPE 180
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 63/290 (21%)
Query: 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126
+I + K SF + A D V VAIK I + E+R+L+ MN +
Sbjct: 57 EIDSLIGKGSFGQVVK-AYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLELMNKHDT 112
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKY 183
+ H ++ +V ++ +L ++LR + +S + + Q+ L +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 184 IHSA--GIIHRDLKPSNIAVN--EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 239
+ + IIH DLKP NI + + +KI+DFG + + + +R+YR+PE++L
Sbjct: 173 LATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLL- 231
Query: 240 WMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299
G+P+ D + + G +L
Sbjct: 232 -------GMPY--------------DLAIDMWSLG----------------------CIL 248
Query: 300 NWMHYNQ------TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP 343
MH + ++ Q+N I+E+LG PPA + + + ARK+ LP
Sbjct: 249 VEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQ--APKARKFFEKLP 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 21/138 (15%)
Query: 90 GVKVAIKKIARPFQSAVHAKRT---YRELRMLKHMNHENVIGLLDVFHSNTCLA------ 140
G VA+K + + HA+R RE+ ++K + H N++ + L+
Sbjct: 60 GSDVAVKIL---MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYL 116
Query: 141 DFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAG--IIHRDLKPSN 198
++Y + H GA ++L + + Y + +G+ Y+H+ I+HR+LK N
Sbjct: 117 SRGSLYRLLHKSGA-------REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPN 169
Query: 199 IAVNEDCELKILDFGLAR 216
+ V++ +K+ DFGL+R
Sbjct: 170 LLVDKKYTVKVCDFGLSR 187
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEM---TGYVATRWYRA 294
+N++H P ++LK N+ V++ +K+ DFGL+R + T + A
Sbjct: 150 MNYLHNRNP--PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMA 207
Query: 295 PEIMLNWMHYNQTDIHQLNLIMEMLGT 321
PE++ + ++D++ +I+ L T
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VA+K + +A K +RE +L ++ HE+++ V C+ + + +
Sbjct: 44 ILVAVKTLKDASDNA--RKDFHREAELLTNLQHEHIVKFYGV-----CVEGDPLIMVFEY 96
Query: 151 LMGADLNNILRTQ--------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKP 196
+ DLN LR +L+ + + QI G+ Y+ S +HRDL
Sbjct: 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT 156
Query: 197 SNIAVNEDCELKILDFGLAR 216
N V E+ +KI DFG++R
Sbjct: 157 RNCLVGENLLVKIGDFGMSR 176
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Query: 68 IGPTLSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN 125
+G L K F + + L G VKVA+K + ++ + RE +K +H +
Sbjct: 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDH--------VQFLVYQ 176
V L+ V + ++ M DL+ L ++ ++ V+F+V
Sbjct: 87 VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV-D 145
Query: 177 ILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
I G++Y+ S IHRDL N + ED + + DFGL+R
Sbjct: 146 IACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 30/231 (12%)
Query: 37 WTVYPASKLPSRRLHDHFNQPYSE---ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKV 93
W + + + S D PY+E R + G TL +F + + +
Sbjct: 1 WKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA 60
Query: 94 AIKKIARPFQSAVHAKRT---YRELRMLKHMN-HENVIGLLD---------VFHSNTCLA 140
+K + +S HA EL+++ H+ HEN++ LL V C
Sbjct: 61 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 141 DFKNVY--MVTHLMGADLNNILRTQKLSDDHVQFL--------VYQILRGLKYIHSAGII 190
D N ++G L + L + + L Q+ +G+ ++ S I
Sbjct: 121 DLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI 180
Query: 191 HRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 241
HRD+ N+ + KI DFGLAR N+ + Y+ R P + WM
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNARLP---VKWM 227
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 17/151 (11%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + Y++T M
Sbjct: 39 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTRE-PPFYIITEFM 89
Query: 153 G-ADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
+L + LR Q++S + ++ QI ++Y+ IHRDL N V E+ +K
Sbjct: 90 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 149
Query: 209 ILDFGLAR-PTENEMTGYVATRW---YRAPE 235
+ DFGL+R T + T + ++ + APE
Sbjct: 150 VADFGLSRLMTGDTFTAHAGAKFPIKWTAPE 180
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 146 YMVTHLMGADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204
+++ + G DL +I ++++ + +F +I+ L ++H GII+RDLK N+ ++ +
Sbjct: 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE 160
Query: 205 CELKILDFGLARPTENEMTG-----YVATRWYRAPEIM 237
K+ DFG+ + E G + T Y APEI+
Sbjct: 161 GHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEIL 196
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG-- 285
R+Y A EI+ M + G+ ++DLK N+ ++ + K+ DFG+ + E G
Sbjct: 126 ARFY-AAEIISALMFLHDKGI--IYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVT 180
Query: 286 ---YVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN 340
+ T Y APEI+ ++ D + +++ + A F A+ D +N
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN 125
I+IG + SF ++ LD+ + V+VA ++ + +R E LK + H N
Sbjct: 32 IEIG----RGSFKTVYK-GLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 126 VIGLLDVFHSNTCLADFKNVYMVTHL-MGADLNNILRTQKLSDDHV-QFLVYQILRGLKY 183
++ D + S + K + +VT L L L+ K+ V + QIL+GL++
Sbjct: 87 IVRFYDSWEST--VKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQF 144
Query: 184 IHSAG--IIHRDLKPSNIAVNE-DCELKILDFGLARPTENEMT-GYVATRWYRAPE 235
+H+ IIHRDLK NI + +KI D GLA + T + APE
Sbjct: 145 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPE 200
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 125 NVIGLLDVF----HSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQI 177
+++ +LDV+ H CL + ++ + G +L + ++ Q ++ ++ I
Sbjct: 83 HIVCILDVYENMHHGKRCL-----LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137
Query: 178 LRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARP-TENEMTGYVATRWYRA 233
++++HS I HRD+KP N+ + +D LK+ DFG A+ T+N + T +Y A
Sbjct: 138 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVA 197
Query: 234 PEIM 237
PE++
Sbjct: 198 PEVL 201
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 253 QDLKPSNI---AVNEDCELKILDFGLARPT-ENEMTGYVATRWYRAPEIMLNWMHYNQTD 308
+D+KP N+ + +D LK+ DFG A+ T +N + T +Y APE++ + D
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 309 IHQLNLIMEML--GTPP 323
+ L +IM +L G PP
Sbjct: 212 MWSLGVIMYILLCGFPP 228
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 125 NVIGLLDVF----HSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQI 177
+++ +LDV+ H CL + ++ + G +L + ++ Q ++ ++ I
Sbjct: 64 HIVCILDVYENMHHGKRCL-----LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 178 LRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARP-TENEMTGYVATRWYRA 233
++++HS I HRD+KP N+ + +D LK+ DFG A+ T+N + T +Y A
Sbjct: 119 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVA 178
Query: 234 PEIM 237
PE++
Sbjct: 179 PEVL 182
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 253 QDLKPSNI---AVNEDCELKILDFGLARPT-ENEMTGYVATRWYRAPEIMLNWMHYNQTD 308
+D+KP N+ + +D LK+ DFG A+ T +N + T +Y APE++ + D
Sbjct: 133 RDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 192
Query: 309 IHQLNLIMEML--GTPP 323
+ L +IM +L G PP
Sbjct: 193 MWSLGVIMYILLCGFPP 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + Y++T M
Sbjct: 46 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTRE-PPFYIITEFM 96
Query: 153 G-ADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
+L + LR Q++S + ++ QI ++Y+ IHRDL N V E+ +K
Sbjct: 97 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 156
Query: 209 ILDFGLAR 216
+ DFGL+R
Sbjct: 157 VADFGLSR 164
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 92 KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
KVAIK I + ++ E ++ ++H ++ L V CL + +
Sbjct: 53 KVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQLYGV-----CLEQAPICLVFEFM 104
Query: 152 MGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L++ LRTQ+ + + + + + G+ Y+ A +IHRDL N V E+ +K+
Sbjct: 105 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 164
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIM 237
DFG+ R +++ T T++ + +PE+
Sbjct: 165 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 196
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYNQTD 308
+DL N V E+ +K+ DFG+ R +++ T T++ + +PE+ + +++D
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 309 IHQLNLIM 316
+ ++M
Sbjct: 207 VWSFGVLM 214
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT--H 150
VA+K P Q + Y E+ L M HEN++ + T + +++++T H
Sbjct: 50 VAVKIF--PIQDKQSWQNEY-EVYSLPGMKHENILQFIGAEKRGTSVD--VDLWLITAFH 104
Query: 151 LMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHS----------AGIIHRDLKPSNIA 200
G+ L++ L+ +S + + + + RGL Y+H I HRD+K N+
Sbjct: 105 EKGS-LSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVL 163
Query: 201 VNEDCELKILDFGLARPTE-----NEMTGYVATRWYRAPEIM 237
+ + I DFGLA E + G V TR Y APE++
Sbjct: 164 LKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-----NEMTGYVATRWYRAPEIMLNWMHYN-- 305
+D+K N+ + + I DFGLA E + G V TR Y APE++ +++
Sbjct: 155 RDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRD 214
Query: 306 ---QTDIHQLNLIMEMLGT 321
+ D++ + L++ L +
Sbjct: 215 AFLRIDMYAMGLVLWELAS 233
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + Y++T M
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTRE-PPFYIITEFM 91
Query: 153 G-ADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
+L + LR Q++S + ++ QI ++Y+ IHRDL N V E+ +K
Sbjct: 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 151
Query: 209 ILDFGLAR 216
+ DFGL+R
Sbjct: 152 VADFGLSR 159
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG---VKVAIKKIARPFQSAVHAKRTY-REL 115
EI I I + F + S L V G + VAIK + + +R + E
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRL-KVPGKREICVAIKTLKAGYTD--KQRRDFLSEA 81
Query: 116 RMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF-- 172
++ +H N+I H + K V ++T M L+ LR +Q
Sbjct: 82 SIMGQFDHPNII------HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 135
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 232
++ I G+KY+ +HRDL NI VN + K+ DFG++R E++ TR +
Sbjct: 136 MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 195
Query: 233 AP 234
P
Sbjct: 196 IP 197
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIMLNWMHYN 305
+DL NI VN + K+ DFG++R E++ G + RW APE + +
Sbjct: 155 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT-APEAIAYRKFTS 213
Query: 306 QTDIHQLNLIM 316
+D+ ++M
Sbjct: 214 ASDVWSYGIVM 224
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + Y++T M
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTRE-PPFYIITEFM 91
Query: 153 G-ADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
+L + LR Q++S + ++ QI ++Y+ IHRDL N V E+ +K
Sbjct: 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 151
Query: 209 ILDFGLAR 216
+ DFGL+R
Sbjct: 152 VADFGLSR 159
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 90 GVKVAIKK-IARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF-KNVYM 147
G KVA+K+ Q + L +H + ++IG D + + + +N +
Sbjct: 63 GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 148 VTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
HL G+DL T +S + + RGL Y+H+ IIHRD+K NI ++E+
Sbjct: 123 KRHLYGSDLP----TMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVP 178
Query: 208 KILDFGLAR 216
KI DFG+++
Sbjct: 179 KITDFGISK 187
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 90 GVKVAIKK-IARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF-KNVYM 147
G KVA+K+ Q + L +H + ++IG D + + + +N +
Sbjct: 63 GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 148 VTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
HL G+DL T +S + + RGL Y+H+ IIHRD+K NI ++E+
Sbjct: 123 KRHLYGSDLP----TMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVP 178
Query: 208 KILDFGLAR 216
KI DFG+++
Sbjct: 179 KITDFGISK 187
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 230 WYRAPEIMLN---WMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP-TENEMTG 285
W + EI + +HY T + +D+K NI ++E+ KI DFG+++ TE + T
Sbjct: 138 WEQRLEICIGAARGLHYLHTRAIIH-RDVKSINILLDENFVPKITDFGISKKGTELDQTH 196
Query: 286 YV----ATRWYRAPEIMLNWMHYNQTDIHQLNLIM 316
T Y PE + ++D++ +++
Sbjct: 197 LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 15/75 (20%)
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT---ENEMT--------- 223
QI ++++HS G++HRDLKPSNI D +K+ DFGL E E T
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 224 ---GYVATRWYRAPE 235
G V T+ Y +PE
Sbjct: 232 THXGQVGTKLYMSPE 246
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPT---ENEMT------------GYVATRWYRAPEI 297
+DLKPSNI D +K+ DFGL E E T G V T+ Y +PE
Sbjct: 188 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQ 247
Query: 298 MLNWMHYNQTDIHQLNLIM 316
+ + ++ DI L LI+
Sbjct: 248 IHGNNYSHKVDIFSLGLIL 266
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-----GADLNNILRTQK--- 164
RE M + NH N++ L+ CL + + L+ G N I R +
Sbjct: 75 READMHRLFNHPNILRLV-----AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN 129
Query: 165 -LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223
L++D + +L+ I RGL+ IH+ G HRDLKP+NI + ++ + ++D G +
Sbjct: 130 FLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189
Query: 224 G---------YVATRW---YRAPEI 236
G + A R YRAPE+
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPEL 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 97 KIARPFQSAVHAKRTYRELRMLKHMNHEN-VIGLLDVFHSNTCLADFKNVYMVTHLMGAD 155
K A Q A + T E ++L+H+ ++ L F + T L ++ ++ G +
Sbjct: 91 KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH-----LILDYINGGE 145
Query: 156 L-NNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
L ++ + ++ ++ VQ V +I+ L+++H GII+RD+K NI ++ + + + DFGL
Sbjct: 146 LFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL 205
Query: 215 ARPTENEMT----GYVATRWYRAPEIM 237
++ + T + T Y AP+I+
Sbjct: 206 SKEFVADETERAYDFCGTIEYMAPDIV 232
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGL 275
R TE+E+ YV EI+L H ++ G+ ++D+K NI ++ + + + DFGL
Sbjct: 155 RFTEHEVQIYVG-------EIVLALEHLHKLGI--IYRDIKLENILLDSNGHVVLTDFGL 205
Query: 276 ARPTENEMT----GYVATRWYRAPEIMLNW--MHYNQTDIHQLNLIMEMLGTPPAEFMAK 329
++ + T + T Y AP+I+ H D L ++M L T + F
Sbjct: 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
Query: 330 ISSDS----ARKYINSLP 343
+S +R+ + S P
Sbjct: 266 GEKNSQAEISRRILKSEP 283
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 69
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--- 175
+ H N++ LL V C + Y++T M +L + LR + + L+Y
Sbjct: 70 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHRDL N V E+ +K+ DFGL+R
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + Y++T M
Sbjct: 42 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTRE-PPFYIITEFM 92
Query: 153 G-ADLNNILRTQKLSDDHVQFLVY---QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
+L + LR + + L+Y QI ++Y+ IHRDL N V E+ +K
Sbjct: 93 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 152
Query: 209 ILDFGLAR 216
+ DFGL+R
Sbjct: 153 VADFGLSR 160
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 124/340 (36%), Gaps = 83/340 (24%)
Query: 83 SALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
+ ++ ++ + A+K I + Q R +RE+ ML G +V +
Sbjct: 31 TCINLITSQEYAVKIIEK--QPGHIRSRVFREVEMLYQCQ-----GHRNVLELIEFFEEE 83
Query: 143 KNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIA 200
Y+V M G+ L++I + + ++ +V + L ++H+ GI HRDLKP NI
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 201 V---NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257
N+ +KI DF L
Sbjct: 144 CEHPNQVSPVKICDFDLG------------------------------------------ 161
Query: 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-----MHYNQTDIHQL 312
S I +N DC ++ P E+ + Y APE++ + ++ + D+ L
Sbjct: 162 SGIKLNGDCS------PISTP---ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 313 NLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGA-----------NP 359
+I+ +L G PP F+ + SD + P F + +G +
Sbjct: 213 GVILYILLSGYPP--FVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISC 270
Query: 360 QAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDPNDEPT 399
A +R++A Q L HP++ + N PT
Sbjct: 271 AAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPT 310
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 68
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--- 175
+ H N++ LL V C + Y++T M +L + LR + + L+Y
Sbjct: 69 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHRDL N V E+ +K+ DFGL+R
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 163
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG---VKVAIKKIARPFQSAVHAKRTY-REL 115
EI I I + F + S L V G + VAIK + + +R + E
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRL-KVPGKREICVAIKTLKAGYTD--KQRRDFLSEA 60
Query: 116 RMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF-- 172
++ +H N+I H + K V ++T M L+ LR +Q
Sbjct: 61 SIMGQFDHPNII------HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 114
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 232
++ I G+KY+ +HRDL NI VN + K+ DFG++R E++ TR +
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 233 AP 234
P
Sbjct: 175 IP 176
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIMLNWM 302
+ +DL NI VN + K+ DFG++R E++ G + RW APE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAYRK 189
Query: 303 HYNQTDIHQLNLIM 316
+ +D+ ++M
Sbjct: 190 FTSASDVWSYGIVM 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 69
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--- 175
+ H N++ LL V C + Y++T M +L + LR + + L+Y
Sbjct: 70 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHRDL N V E+ +K+ DFGL+R
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + Y++T M
Sbjct: 43 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTRE-PPFYIITEFM 93
Query: 153 G-ADLNNILRTQKLSDDHVQFLVY---QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
+L + LR + + L+Y QI ++Y+ IHRDL N V E+ +K
Sbjct: 94 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 153
Query: 209 ILDFGLAR 216
+ DFGL+R
Sbjct: 154 VADFGLSR 161
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG---VKVAIKKIARPFQSAVHAKRTY-REL 115
EI I I + F + S L V G + VAIK + + +R + E
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRL-KVPGKREICVAIKTLKAGYTD--KQRRDFLSEA 66
Query: 116 RMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQF-- 172
++ +H N+I H + K V ++T M L+ LR +Q
Sbjct: 67 SIMGQFDHPNII------HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 120
Query: 173 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 232
++ I G+KY+ +HRDL NI VN + K+ DFG++R E++ TR +
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 233 AP 234
P
Sbjct: 181 IP 182
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIMLNWM 302
+ +DL NI VN + K+ DFG++R E++ G + RW APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT-APEAIAYRK 195
Query: 303 HYNQTDIHQLNLIM 316
+ +D+ ++M
Sbjct: 196 FTSASDVWSYGIVM 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 64
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--- 175
+ H N++ LL V C + Y++T M +L + LR + + L+Y
Sbjct: 65 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHRDL N V E+ +K+ DFGL+R
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + Y++T M
Sbjct: 46 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTRE-PPFYIITEFM 96
Query: 153 G-ADLNNILRTQKLSDDHVQFLVY---QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
+L + LR + + L+Y QI ++Y+ IHRDL N V E+ +K
Sbjct: 97 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 156
Query: 209 ILDFGLAR 216
+ DFGL+R
Sbjct: 157 VADFGLSR 164
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 88 VSGVKVAIKKIARPFQ-SAVHAKRTY-RELRMLKHMNHENVIGLLDVFHSNT---CLADF 142
V+ VA+KK+A + K+ + +E+++ HEN++ LL F S+ CL
Sbjct: 43 VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG-FSSDGDDLCLV-- 99
Query: 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
VY + L+ + T LS + G+ ++H IHRD+K +NI ++
Sbjct: 100 -YVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLD 158
Query: 203 EDCELKILDFGLARPTEN-----EMTGYVATRWYRAPEIM 237
E KI DFGLAR +E + V T Y APE +
Sbjct: 159 EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTEN-----EMTGYVATRWY 292
+N++H N +D+K +NI ++E KI DFGLAR +E + V T Y
Sbjct: 137 INFLHENH----HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAY 192
Query: 293 RAPEIMLNWMHYNQTDIHQLNLI-MEMLGTPPA 324
APE + + ++DI+ ++ +E++ PA
Sbjct: 193 XAPEALRGEI-TPKSDIYSFGVVLLEIITGLPA 224
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 34/165 (20%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYR----ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVY 146
V VAIK + A + +R R E ++ +H N+I L V + LA Y
Sbjct: 78 VPVAIKAL-----KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-TRGRLAMIVTEY 131
Query: 147 MVTHLMGADLNNILRTQKLSDDHVQFLVYQIL-------RGLKYIHSAGIIHRDLKPSNI 199
M L+ LRT QF + Q++ G++Y+ G +HRDL N+
Sbjct: 132 MEN----GSLDTFLRTHD-----GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNV 182
Query: 200 AVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIM 237
V+ + K+ DFGL+R E++ G + RW APE +
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT-APEAI 226
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIMLNWM 302
+ +DL N+ V+ + K+ DFGL+R E++ G + RW APE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT-APEAIAFRT 230
Query: 303 HYNQTDIHQLNLIM 316
+ +D+ ++M
Sbjct: 231 FSSASDVWSFGVVM 244
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 144 NVYMVTHLMGADLNN-----ILRTQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPS 197
+V++ LM L+ I + Q + +D + + I++ L+++HS +IHRD+KPS
Sbjct: 124 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 183
Query: 198 NIAVNEDCELKILDFGLARPTENEMTGYV--ATRWYRAPE 235
N+ +N ++K+ DFG++ + + + + Y APE
Sbjct: 184 NVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPE 223
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 208 KILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCE 267
+++D G P ++ G +A +A L +H + + +D+KPSN+ +N +
Sbjct: 142 QVIDKGQTIP--EDILGKIAVSIVKA----LEHLH---SKLSVIHRDVKPSNVLINALGQ 192
Query: 268 LKILDFGLARPTENEMTGYV--ATRWYRAPEIM---LNWMHYN-QTDIHQLNLIM 316
+K+ DFG++ + + + + Y APE + LN Y+ ++DI L + M
Sbjct: 193 VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 247
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 64
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--- 175
+ H N++ LL V C + Y++T M +L + LR + + L+Y
Sbjct: 65 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHRDL N V E+ +K+ DFGL+R
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 77
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--- 175
+ H N++ LL V C + Y++T M +L + LR + + L+Y
Sbjct: 78 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHRDL N V E+ +K+ DFGL+R
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 172
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 34/165 (20%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYR----ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVY 146
V VAIK + A + +R R E ++ +H N+I L V + LA Y
Sbjct: 78 VPVAIKAL-----KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-TRGRLAMIVTEY 131
Query: 147 MVTHLMGADLNNILRTQKLSDDHVQFLVYQIL-------RGLKYIHSAGIIHRDLKPSNI 199
M L+ LRT QF + Q++ G++Y+ G +HRDL N+
Sbjct: 132 MEN----GSLDTFLRTHD-----GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNV 182
Query: 200 AVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIM 237
V+ + K+ DFGL+R E++ G + RW APE +
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT-APEAI 226
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENE-------MTGYVATRWYRAPEIMLNWM 302
+ +DL N+ V+ + K+ DFGL+R E++ G + RW APE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT-APEAIAFRT 230
Query: 303 HYNQTDIHQLNLIM 316
+ +D+ ++M
Sbjct: 231 FSSASDVWSFGVVM 244
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 47/197 (23%)
Query: 58 YSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRM 117
+ E+CRG + P KES VAIK + + + + E +
Sbjct: 29 FGEVCRGRLK-APG-KKESC---------------VAIKTLKGGY-TERQRREFLSEASI 70
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQ 176
+ H N+I L V ++ V ++T M L++ LR L+D QF V Q
Sbjct: 71 MGQFEHPNIIRLEGVVTNSM------PVMILTEFMENGALDSFLR---LNDG--QFTVIQ 119
Query: 177 -------ILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR--------PTE-N 220
I G++Y+ +HRDL NI VN + K+ DFGL+R PTE +
Sbjct: 120 LVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETS 179
Query: 221 EMTGYVATRWYRAPEIM 237
+ G + RW APE +
Sbjct: 180 SLGGKIPIRWT-APEAI 195
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLAR--------PTE-NEMTGYVATRWYRAPEIMLN 300
+ +DL NI VN + K+ DFGL+R PTE + + G + RW APE +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT-APEAIAF 197
Query: 301 WMHYNQTDIHQLNLIM 316
+ +D ++M
Sbjct: 198 RKFTSASDAWSYGIVM 213
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + ++ +
Sbjct: 39 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTREPPFYIIIEFMT 90
Query: 153 GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
+L + LR Q++S + ++ QI ++Y+ IHRDL N V E+ +K+
Sbjct: 91 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV 150
Query: 210 LDFGLAR-PTENEMTGYVATRW---YRAPE 235
DFGL+R T + T + ++ + APE
Sbjct: 151 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 19/185 (10%)
Query: 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAK----RTYRELRMLKHM 121
+IG L K F ++ A + S VA+K + F+S + + + RE+ + H+
Sbjct: 25 FEIGRPLGKGKFGNVYL-AREKKSHFIVALKVL---FKSQIEKEGVEHQLRREIEIQAHL 80
Query: 122 NHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQKLSDDHVQFLVYQILR 179
+H N++ L + F+ D + +Y++ G + ++ + ++ ++
Sbjct: 81 HHPNILRLYNYFY------DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD 134
Query: 180 GLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG--LARPTENEMTGYVATRWYRAPEIM 237
L Y H +IHRD+KP N+ + ELKI DFG + P+ T T Y PE++
Sbjct: 135 ALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT-MCGTLDYLPPEMI 193
Query: 238 LNWMH 242
MH
Sbjct: 194 EGRMH 198
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + Y++T M
Sbjct: 43 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTRE-PPFYIITEFM 93
Query: 153 G-ADLNNILRTQKLSDDHVQFLVY---QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
+L + LR + + L+Y QI ++Y+ IHRDL N V E+ +K
Sbjct: 94 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 153
Query: 209 ILDFGLAR 216
+ DFGL+R
Sbjct: 154 VADFGLSR 161
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + ++ +
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTREPPFYIIIEFMT 92
Query: 153 GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
+L + LR Q++S + ++ QI ++Y+ IHRDL N V E+ +K+
Sbjct: 93 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV 152
Query: 210 LDFGLAR 216
DFGL+R
Sbjct: 153 ADFGLSR 159
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 144 NVYMVTHLMGADLNN-----ILRTQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPS 197
+V++ LM L+ I + Q + +D + + I++ L+++HS +IHRD+KPS
Sbjct: 80 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 139
Query: 198 NIAVNEDCELKILDFGLARPTENEMTGYV--ATRWYRAPE 235
N+ +N ++K+ DFG++ +++ + + Y APE
Sbjct: 140 NVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE 179
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 15/115 (13%)
Query: 208 KILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCE 267
+++D G P ++ G +A +A L +H + + +D+KPSN+ +N +
Sbjct: 98 QVIDKGQTIP--EDILGKIAVSIVKA----LEHLH---SKLSVIHRDVKPSNVLINALGQ 148
Query: 268 LKILDFGLARPTENEMTGYV--ATRWYRAPEIM---LNWMHYN-QTDIHQLNLIM 316
+K+ DFG++ +++ + + Y APE + LN Y+ ++DI L + M
Sbjct: 149 VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 203
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 66
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--- 175
+ H N++ LL V C + Y++T M +L + LR + + L+Y
Sbjct: 67 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHRDL N V E+ +K+ DFGL+R
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + ++ +
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTREPPFYIIIEFMT 92
Query: 153 GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
+L + LR Q++S + ++ QI ++Y+ IHRDL N V E+ +K+
Sbjct: 93 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV 152
Query: 210 LDFGLAR 216
DFGL+R
Sbjct: 153 ADFGLSR 159
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 146 YMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
Y+V +G + QKL + +IL L Y+HS G+++ DLKP NI + E+
Sbjct: 160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE- 218
Query: 206 ELKILDFGLARPTENEMTGYVATRWYRAPEIM 237
+LK++D G A N T ++APEI+
Sbjct: 219 QLKLIDLG-AVSRINSFGYLYGTPGFQAPEIV 249
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 238 LNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297
L+++H + + DLKP NI + E+ +LK++D G A N T ++APEI
Sbjct: 195 LSYLH----SIGLVYNDLKPENIMLTEE-QLKLIDLG-AVSRINSFGYLYGTPGFQAPEI 248
Query: 298 M 298
+
Sbjct: 249 V 249
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTYRELRML 118
I R ++ +G L + F + L G +KVA+K + S + E +
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 119 KHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDD--HV------ 170
K +H NVI LL V + K + ++ + DL+ L +L H+
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+F+V I G++Y+ + +HRDL N + +D + + DFGL++
Sbjct: 151 KFMV-DIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT-HL 151
VA+K I + ++ ++E + + ++H ++ V C ++ +Y+VT ++
Sbjct: 35 VAVKMIK---EGSMSEDEFFQEAQTMMKLSHPKLVKFYGV-----CSKEYP-IYIVTEYI 85
Query: 152 MGADLNNILRTQKLSDDHVQFL--VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L N LR+ + Q L Y + G+ ++ S IHRDL N V+ D +K+
Sbjct: 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKV 145
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIM 237
DFG+ R +++ V T++ + APE+
Sbjct: 146 SDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVF 177
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYN 305
F +DL N V+ D +K+ DFG+ R +++ V T++ + APE+ + + +
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 306 QTDIHQLNLIM 316
++D+ ++M
Sbjct: 185 KSDVWAFGILM 195
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 271
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRT---QKLSDDHVQFLVY 175
+ H N++ LL V C + Y++T M +L + LR Q++S + ++
Sbjct: 272 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHR+L N V E+ +K+ DFGL+R
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 366
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 165 LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTENEM- 222
L ++ + +Q+L +++ H+ G++HRD+K NI ++ + ELK++DFG ++ +
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 223 TGYVATRWYRAPEIMLNWMHYNQ 245
T + TR Y PE W+ Y++
Sbjct: 214 TDFDGTRVYSPPE----WIRYHR 232
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIK-KIARPFQSAVHAKRTYRELRMLKHMNHENV 126
+G + SF I+ A + SG +VAIK + + +H E + K M +
Sbjct: 13 LGRKIGSGSFGDIYLGA-NIASGEEVAIKLECVKTKHPQLHI-----ESKFYKMM--QGG 64
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYI 184
+G+ + C A+ MV L+G L ++ ++K S V L Q++ ++YI
Sbjct: 65 VGIPSI---KWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 121
Query: 185 HSAGIIHRDLKPSNIAVN---EDCELKILDFGLARPTENEMT 223
HS IHRD+KP N + + + I+DFGLA+ + T
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + ++ +
Sbjct: 46 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTREPPFYIIIEFMT 97
Query: 153 GADLNNILRTQKLSDDHVQFLVY---QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
+L + LR + + L+Y QI ++Y+ IHRDL N V E+ +K+
Sbjct: 98 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV 157
Query: 210 LDFGLAR 216
DFGL+R
Sbjct: 158 ADFGLSR 164
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 93 VAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151
VAIK + + +R + E ++ +H NVI L V +T V ++T
Sbjct: 38 VAIKTLKSGYTE--KQRRDFLSEASIMGQFDHPNVIHLEGVVTKST------PVMIITEF 89
Query: 152 M-GADLNNILRTQKLSDDHVQF--LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
M L++ LR +Q ++ I G+KY+ +HR L NI VN + K
Sbjct: 90 MENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCK 149
Query: 209 ILDFGLARPTENE---------MTGYVATRWYRAPE 235
+ DFGL+R E++ + G + RW APE
Sbjct: 150 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPE 184
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VAIK I + ++ E +++ +++HE ++ L V C + ++++T M
Sbjct: 51 VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV-----CTKQ-RPIFIITEYM 101
Query: 153 G-ADLNNILRTQKLSDDHVQFL--VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L N LR + Q L + ++Y+ S +HRDL N VN+ +K+
Sbjct: 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 161
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIML 238
DFGL+R ++E T V +++ + PE+++
Sbjct: 162 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM 194
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYN 305
F +DL N VN+ +K+ DFGL+R ++E T V +++ + PE+++ +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 306 QTDIHQLNLIM 316
++DI ++M
Sbjct: 201 KSDIWAFGVLM 211
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILR----TQKLSDD 168
RE +LK +NH+N++ L + T V ++ L +L L +
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTR---HKVLIMEFCPCGSLYTVLEEPSNAYGLPES 112
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNI--AVNEDCE--LKILDFGLARPTENE 221
++ ++ G+ ++ GI+HR++KP NI + ED + K+ DFG AR E++
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 18/170 (10%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM- 147
+G VA+K + + H +E+ +L+ + HE++I C D +
Sbjct: 59 TGEMVAVKAL-KADAGPQHRSGWKQEIDILRTLYHEHII------KYKGCCEDAGAASLQ 111
Query: 148 --VTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
+ ++ L + L + + QI G+ Y+H+ IHRDL N+ ++ D
Sbjct: 112 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR 171
Query: 206 ELKILDFGLAR--PTENEM-----TGYVATRWYRAPEIMLNWMHYNQTGV 248
+KI DFGLA+ P +E G WY APE + + Y + V
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYASDV 220
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 15/116 (12%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLAR--PTENEM-----TGYVATRWYRAPEIMLNWM 302
+ +DL N+ ++ D +KI DFGLA+ P +E G WY APE + +
Sbjct: 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYK 213
Query: 303 HYNQTDIHQLNLIMEMLGT-------PPAEFMAKISSDSARKYINSLPLLTKKDFR 351
Y +D+ + + L T PP +F+ I + + L L ++ R
Sbjct: 214 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 269
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLKYIHSAGIIHRDLKPSNIAVNE 203
+YMV DLN+ L+ +K D + ++ +L + IH GI+H DLKP+N +
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 204 DCELKILDFGLARPTENEMTGY-----VATRWYRAPEIMLNWMHYNQTG 247
D LK++DFG+A + + T V T Y PE + + + G
Sbjct: 190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 34/163 (20%)
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGY-----VATRWYRAPEIMLNWMHYNQT- 307
DLKP+N + D LK++DFG+A + + T V T Y PE + + +
Sbjct: 180 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 308 ----------DIHQLNLI---MEMLGTPPAEFMAKISSDSARKYIN---SLPLLTKKDFR 351
D+ L I M TP + + +IS A N P + +KD +
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 298
Query: 352 QVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
V K +RI+ + LAHPY+ + P
Sbjct: 299 DVLKCC-----------LKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLKYIHSAGIIHRDLKPSNIAVNE 203
+YMV DLN+ L+ +K D + ++ +L + IH GI+H DLKP+N +
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 204 DCELKILDFGLARPTENEMTGY-----VATRWYRAPEIMLNWMHYNQTG 247
D LK++DFG+A + + T V T Y PE + + + G
Sbjct: 190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 34/163 (20%)
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGY-----VATRWYRAPEIMLNWMHYNQT- 307
DLKP+N + D LK++DFG+A + + T V T Y PE + + +
Sbjct: 180 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 308 ----------DIHQLNLI---MEMLGTPPAEFMAKISSDSARKYIN---SLPLLTKKDFR 351
D+ L I M TP + + +IS A N P + +KD +
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 298
Query: 352 QVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
V K +RI+ + LAHPY+ + P
Sbjct: 299 DVLKCC-----------LKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQ--KLSDDHV 170
+E+ +L H N++ L + F S L V + + G D+ + T +L++ +
Sbjct: 50 KEISILNIARHRNILHLHESFESMEEL-----VMIFEFISGLDIFERINTSAFELNEREI 104
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNI--AVNEDCELKILDFGLAR---PTENEMTGY 225
V+Q+ L+++HS I H D++P NI +KI++FG AR P +N +
Sbjct: 105 VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 226 VATRWYRAPEI 236
A +Y APE+
Sbjct: 165 TAPEYY-APEV 174
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI--AVNEDCELKILDFGLA 276
E E+ YV ++ E L ++H + G +F D++P NI +KI++FG A
Sbjct: 101 EREIVSYV----HQVCE-ALQFLHSHNIG---HF-DIRPENIIYQTRRSSTIKIIEFGQA 151
Query: 277 R---PTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSD 333
R P +N + A +Y APE+ + + TD+ L ++ +L + F+A+ +
Sbjct: 152 RQLKPGDNFRLLFTAPEYY-APEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210
Query: 334 SARKYINSLPLLTKKDFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQ 390
+N+ ++ F+++ + +A+ R+TA +AL HP+L Q
Sbjct: 211 IIENIMNAEYTFDEEAFKEI----SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + ++ +
Sbjct: 42 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTREPPFYIIIEFMT 93
Query: 153 GADLNNILRTQKLSDDHVQFLVY---QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
+L + LR + + L+Y QI ++Y+ IHRDL N V E+ +K+
Sbjct: 94 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV 153
Query: 210 LDFGLAR 216
DFGL+R
Sbjct: 154 ADFGLSR 160
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILR----TQKLSDD 168
RE +LK +NH+N++ L + T V ++ L +L L +
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTR---HKVLIMEFCPCGSLYTVLEEPSNAYGLPES 112
Query: 169 HVQFLVYQILRGLKYIHSAGIIHRDLKPSNI--AVNEDCE--LKILDFGLARPTENE 221
++ ++ G+ ++ GI+HR++KP NI + ED + K+ DFG AR E++
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VAIK I + ++ E +++ +++HE ++ L V C + ++++T M
Sbjct: 42 VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV-----CTKQ-RPIFIITEYM 92
Query: 153 G-ADLNNILRTQKLSDDHVQFL--VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L N LR + Q L + ++Y+ S +HRDL N VN+ +K+
Sbjct: 93 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 152
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIML 238
DFGL+R ++E T V +++ + PE+++
Sbjct: 153 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM 185
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYN 305
F +DL N VN+ +K+ DFGL+R ++E T V +++ + PE+++ +
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 306 QTDIHQLNLIM---EMLGTPPAE 325
++DI ++M LG P E
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VAIK I + ++ E +++ +++HE ++ L V + ++++T M
Sbjct: 35 VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ------RPIFIITEYM 85
Query: 153 G-ADLNNILRTQKLSDDHVQFL--VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L N LR + Q L + ++Y+ S +HRDL N VN+ +K+
Sbjct: 86 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 145
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIML 238
DFGL+R ++E T V +++ + PE+++
Sbjct: 146 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM 178
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYN 305
F +DL N VN+ +K+ DFGL+R ++E T V +++ + PE+++ +
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 306 QTDIHQLNLIM---EMLGTPPAE 325
++DI ++M LG P E
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VA+K + + + + +E ++K + H N++ LL V C + Y+VT M
Sbjct: 60 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-----CTLE-PPFYIVTEYM 110
Query: 153 G-ADLNNILRTQKLSDDHVQFLVY---QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208
+L + LR + L+Y QI ++Y+ IHRDL N V E+ +K
Sbjct: 111 PYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVK 170
Query: 209 ILDFGLAR 216
+ DFGL+R
Sbjct: 171 VADFGLSR 178
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VAIK I + ++ E +++ +++HE ++ L V + ++++T M
Sbjct: 51 VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ------RPIFIITEYM 101
Query: 153 G-ADLNNILRTQKLSDDHVQFL--VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L N LR + Q L + ++Y+ S +HRDL N VN+ +K+
Sbjct: 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 161
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIML 238
DFGL+R ++E T V +++ + PE+++
Sbjct: 162 SDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLM 194
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYN 305
F +DL N VN+ +K+ DFGL+R ++E T V +++ + PE+++ +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 306 QTDIHQLNLIM 316
++DI ++M
Sbjct: 201 KSDIWAFGVLM 211
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 84 ALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142
A D+V VA+K + S V R RE R + +V+ + D + L
Sbjct: 53 AEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQL--- 109
Query: 143 KNVYMVTHLM-GADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIA 200
Y+ L+ G DL LR Q L+ +V QI L H+AG HRD+KP NI
Sbjct: 110 ---YVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENIL 166
Query: 201 VNEDCELKILDFGLARPTENE----MTGYVATRWYRAPE 235
V+ D ++DFG+A T +E + V T +Y APE
Sbjct: 167 VSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPE 205
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE----MTGYVATRWYRAPEIMLNWMHYNQTD 308
+D+KP NI V+ D ++DFG+A T +E + V T +Y APE + D
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRAD 217
Query: 309 IHQLNLIME--MLGTPP 323
I+ L ++ + G+PP
Sbjct: 218 IYALTCVLYECLTGSPP 234
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLKYIHSAGIIHRDLKPSNIAVNE 203
+YMV DLN+ L+ +K D + ++ +L + IH GI+H DLKP+N +
Sbjct: 87 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 145
Query: 204 DCELKILDFGLARPTENEMTGY-----VATRWYRAPE 235
D LK++DFG+A + + T V T Y PE
Sbjct: 146 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 34/163 (20%)
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGY-----VATRWYRAPEIMLNWMHYNQT- 307
DLKP+N + D LK++DFG+A + + T V T Y PE + + +
Sbjct: 136 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 194
Query: 308 ----------DIHQLNLIMEML---GTPPAEFMAKISSDSARKYIN---SLPLLTKKDFR 351
D+ L I+ + TP + + +IS A N P + +KD +
Sbjct: 195 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 254
Query: 352 QVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
V K +RI+ + LAHPY+ + P
Sbjct: 255 DVLKCC-----------LKRDPKQRISIPELLAHPYVQIQTHP 286
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLKYIHSAGIIHRDLKPSNIAVNE 203
+YMV DLN+ L+ +K D + ++ +L + IH GI+H DLKP+N +
Sbjct: 84 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 142
Query: 204 DCELKILDFGLARPTENEMTGY-----VATRWYRAPE 235
D LK++DFG+A + + T V T Y PE
Sbjct: 143 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 34/163 (20%)
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGY-----VATRWYRAPEIMLNWMHYNQT- 307
DLKP+N + D LK++DFG+A + + T V T Y PE + + +
Sbjct: 133 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 191
Query: 308 ----------DIHQLNLIMEML---GTPPAEFMAKISSDSARKYIN---SLPLLTKKDFR 351
D+ L I+ + TP + + +IS A N P + +KD +
Sbjct: 192 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 251
Query: 352 QVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
V K +RI+ + LAHPY+ + P
Sbjct: 252 DVLKCC-----------LKRDPKQRISIPELLAHPYVQIQTHP 283
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLKYIHSAGIIHRDLKPSNIAVNE 203
+YMV DLN+ L+ +K D + ++ +L + IH GI+H DLKP+N +
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 161
Query: 204 DCELKILDFGLARPTENEMTGY-----VATRWYRAPE 235
D LK++DFG+A + + T V T Y PE
Sbjct: 162 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 34/163 (20%)
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGY-----VATRWYRAPEIMLNWMHYNQT- 307
DLKP+N + D LK++DFG+A + + T V T Y PE + + +
Sbjct: 152 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 210
Query: 308 ----------DIHQLNLIMEML---GTPPAEFMAKISSDSARKYIN---SLPLLTKKDFR 351
D+ L I+ + TP + + +IS A N P + +KD +
Sbjct: 211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 270
Query: 352 QVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
V K +RI+ + LAHPY+ + P
Sbjct: 271 DVLKCC-----------LKRDPKQRISIPELLAHPYVQIQTHP 302
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VAIK I + ++ E +++ +++HE ++ L V + ++++T M
Sbjct: 31 VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ------RPIFIITEYM 81
Query: 153 G-ADLNNILRTQKLSDDHVQFL--VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L N LR + Q L + ++Y+ S +HRDL N VN+ +K+
Sbjct: 82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 141
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIML 238
DFGL+R ++E T V +++ + PE+++
Sbjct: 142 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM 174
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYN 305
F +DL N VN+ +K+ DFGL+R ++E T V +++ + PE+++ +
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 306 QTDIHQLNLIM---EMLGTPPAE 325
++DI ++M LG P E
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLKYIHSAGIIHRDLKPSNIAVNE 203
+YMV DLN+ L+ +K D + ++ +L + IH GI+H DLKP+N +
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 204 DCELKILDFGLARPTENEMTGYV 226
D LK++DFG+A + + T V
Sbjct: 190 DGMLKLIDFGIANQMQPDTTSVV 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VAIK I + ++ E +++ +++HE ++ L V C + ++++T M
Sbjct: 36 VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV-----CTKQ-RPIFIITEYM 86
Query: 153 G-ADLNNILRTQKLSDDHVQFL--VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L N LR + Q L + ++Y+ S +HRDL N VN+ +K+
Sbjct: 87 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 146
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIML 238
DFGL+R ++E T V +++ + PE+++
Sbjct: 147 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM 179
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYN 305
F +DL N VN+ +K+ DFGL+R ++E T V +++ + PE+++ +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 306 QTDIHQLNLIM---EMLGTPPAE 325
++DI ++M LG P E
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLKYIHSAGIIHRDLKPSNIAVNE 203
+YMV DLN+ L+ +K D + ++ +L + IH GI+H DLKP+N +
Sbjct: 83 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 141
Query: 204 DCELKILDFGLARPTENEMTGY-----VATRWYRAPE 235
D LK++DFG+A + + T V T Y PE
Sbjct: 142 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 34/163 (20%)
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMTGY-----VATRWYRAPEIMLNWMHYNQT- 307
DLKP+N + D LK++DFG+A + + T V T Y PE + + +
Sbjct: 132 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 190
Query: 308 ----------DIHQLNLIMEML---GTPPAEFMAKISSDSARKYIN---SLPLLTKKDFR 351
D+ L I+ + TP + + +IS A N P + +KD +
Sbjct: 191 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 250
Query: 352 QVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
V K +RI+ + LAHPY+ + P
Sbjct: 251 DVLKCC-----------LKRDPKQRISIPELLAHPYVQIQTHP 282
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 268
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--- 175
+ H N++ LL V C + Y++T M +L + LR + + L+Y
Sbjct: 269 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHR+L N V E+ +K+ DFGL+R
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 363
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 30/167 (17%)
Query: 72 LSKESFDLIFSSALDSVSGVK----VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVI 127
L + +F +F + ++S K VA+K + P +A K RE +L ++ HE+++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA--RKDFQREAELLTNLQHEHIV 80
Query: 128 GLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQ-----------------KLSDDH 169
V D + MV M DLN LR +L
Sbjct: 81 KFYGV------CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 170 VQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+ + QI G+ Y+ S +HRDL N V + +KI DFG++R
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK 119
E+ R I + L + ++ S + VA+K + + + + +E ++K
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLK---EDTMEVEEFLKEAAVMK 310
Query: 120 HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVY--- 175
+ H N++ LL V C + Y++T M +L + LR + + L+Y
Sbjct: 311 EIKHPNLVQLLGV-----CTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 176 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
QI ++Y+ IHR+L N V E+ +K+ DFGL+R
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 405
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 118 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 177
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 178 SHNSLTTPCYTPYYVAPEVL 197
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 77
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK--LSDDHV 170
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++++ V
Sbjct: 78 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 171 QF---------LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+ +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Score = 34.7 bits (78), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 217
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 218 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 263
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 117 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 176
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 177 SHNSLTTPCYTPYYVAPEVL 196
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK + R S K E ++ + V LL + ++T V +VT
Sbjct: 47 IPVAIK-VLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTST-------VQLVTQ 98
Query: 151 LM--GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM G L+++ + +L + QI +G+ Y+ ++HRDL N+ V +
Sbjct: 99 LMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHV 158
Query: 208 KILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 241
KI DFGLAR + + T Y A ++ + WM
Sbjct: 159 KITDFGLARLLDIDETEYHAD----GGKVPIKWM 188
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTG------VPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMT------ 284
+LNW G V +DL N+ V +KI DFGLAR + + T
Sbjct: 121 LLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADG 180
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L +Q+D+
Sbjct: 181 GKVPIKWM-ALESILRRRFTHQSDV 204
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIK-KIARPFQSAVHAKRTYRELRMLKHMNHENV 126
+G + SF I+ D +G +VAIK + + +H E ++ K M +
Sbjct: 13 LGRKIGSGSFGDIYLGT-DIAAGEEVAIKLECVKTKHPQLHI-----ESKIYKMM--QGG 64
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYI 184
+G+ + C A+ MV L+G L ++ ++K S V L Q++ ++YI
Sbjct: 65 VGIPTI---RWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 121
Query: 185 HSAGIIHRDLKPSNIAVN---EDCELKILDFGLARPTENEMT 223
HS IHRD+KP N + + + I+DFGLA+ + T
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 116 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 175
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 176 SHNSLTTPCYTPYYVAPEVL 195
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 77
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 78 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 217
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 218 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 263
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 126 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 185
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 186 SHNSLTTPCYTPYYVAPEVL 205
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 156 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 216 SHNSLTTPCYTPYYVAPEVL 235
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 170 SHNSLTTPCYTPYYVAPEVL 189
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 162 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 221
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 222 SHNSLTTPCYTPYYVAPEVL 241
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 111 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 170
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 171 SHNSLTTPCYTPYYVAPEVL 190
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 68 IGPTLSKESFDLIFSSALDSVSGVKVAIK-KIARPFQSAVHAKRTYRELRMLKHMNHENV 126
+G + SF I+ D +G +VAIK + + +H E ++ K M +
Sbjct: 11 LGRKIGSGSFGDIYLGT-DIAAGEEVAIKLECVKTKHPQLHI-----ESKIYKMM--QGG 62
Query: 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYI 184
+G+ + C A+ MV L+G L ++ ++K S V L Q++ ++YI
Sbjct: 63 VGIPTI---RWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 119
Query: 185 HSAGIIHRDLKPSNIAVN---EDCELKILDFGLARPTENEMT 223
HS IHRD+KP N + + + I+DFGLA+ + T
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 161
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 172 SHNSLTTPCYTPYYVAPEVL 191
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 172 SHNSLTTPCYTPYYVAPEVL 191
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+Q+ RG++++ S IHRDL NI ++E+ +KI DFGLAR
Sbjct: 206 FQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 64
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 65 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 146 FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 204
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 205 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 250
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 67
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQK--LSDDHV 170
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++++ V
Sbjct: 68 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 171 QF---------LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+ +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 149 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 207
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 208 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 253
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 28 TLSRSIVRLWTVYPASKLPSRRLHDHF---NQPYSEICRGVIDIGPTLSKESFDLIFSSA 84
TL +V L+T S L + F +P++++ + + L +E F++I
Sbjct: 45 TLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEM-----QLHREDFEII--KV 97
Query: 85 LDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC------ 138
+ + +VA+ K+ ++A + + MLK DV + C
Sbjct: 98 IGRGAFGEVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 139 ---LADFKNVYMVT-HLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHR 192
D ++Y+V + +G DL +L KL +D +F + +++ + IH +HR
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR 215
Query: 193 DLKPSNIAVNEDCELKILDFGLARPTENEMTGY----VATRWYRAPEIM 237
D+KP N+ ++ + +++ DFG ++ T V T Y +PEI+
Sbjct: 216 DIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 163 QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT- 218
Q ++ ++ I ++Y+HS I HRD+KP N+ + + LK+ DFG A+ T
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 219 -ENEMTGYVATRWYRAPEIM 237
N +T T +Y APE++
Sbjct: 170 SHNSLTEPCYTPYYVAPEVL 189
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 28 TLSRSIVRLWTVYPASKLPSRRLHDHF---NQPYSEICRGVIDIGPTLSKESFDLIFSSA 84
TL +V L+T S L + F +P++++ + + L +E F++I
Sbjct: 29 TLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEM-----QLHREDFEII--KV 81
Query: 85 LDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC------ 138
+ + +VA+ K+ ++A + + MLK DV + C
Sbjct: 82 IGRGAFGEVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 139 ---LADFKNVYMVT-HLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHR 192
D ++Y+V + +G DL +L KL +D +F + +++ + IH +HR
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR 199
Query: 193 DLKPSNIAVNEDCELKILDFGLARPTENEMTGY----VATRWYRAPEIM 237
D+KP N+ ++ + +++ DFG ++ T V T Y +PEI+
Sbjct: 200 DIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD--FKNVY 146
+G VA+K + + H +E+ +L+ + HE++I C D K++
Sbjct: 42 TGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHEHIIKY------KGCCEDQGEKSLQ 94
Query: 147 MVTHLMG-ADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
+V + L + L + + QI G+ Y+HS IHR+L N+ ++ D
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDR 154
Query: 206 ELKILDFGLAR--PTENEM-----TGYVATRWYRAPEIMLNWMHYNQTGV 248
+KI DFGLA+ P +E G WY APE + + Y + V
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDV 203
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 47/197 (23%)
Query: 58 YSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRM 117
+ E+CRG + P KES VAIK + + + + E +
Sbjct: 27 FGEVCRGRLK-APG-KKESC---------------VAIKTLKGGY-TERQRREFLSEASI 68
Query: 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQ 176
+ H N+I L V ++ V ++T M L++ LR L+D QF V Q
Sbjct: 69 MGQFEHPNIIRLEGVVTNSM------PVMILTEFMENGALDSFLR---LNDG--QFTVIQ 117
Query: 177 -------ILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR--------PT-EN 220
I G++Y+ +HRDL NI VN + K+ DFGL+R PT +
Sbjct: 118 LVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTS 177
Query: 221 EMTGYVATRWYRAPEIM 237
+ G + RW APE +
Sbjct: 178 SLGGKIPIRWT-APEAI 193
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLAR--------PT-ENEMTGYVATRWYRAPEIMLN 300
+ +DL NI VN + K+ DFGL+R PT + + G + RW APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT-APEAIAF 195
Query: 301 WMHYNQTDIHQLNLIM 316
+ +D ++M
Sbjct: 196 RKFTSASDAWSYGIVM 211
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 71 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 210
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 211 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 256
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 68
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 69 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 150 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 208
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 209 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 254
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 71
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 72 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 153 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 211
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 212 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 257
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 70
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 71 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 210
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 211 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 256
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 64
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 65 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 146 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 204
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 205 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 250
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 125 NVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRG 180
+++ ++DV+ + A K + +V + G +L + ++ Q ++ + I
Sbjct: 116 HIVRIVDVYEN--LYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEA 173
Query: 181 LKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLARPT--ENEMTGYVATRWYRAPE 235
++Y+HS I HRD+KP N+ + + LK+ DFG A+ T N +T T +Y APE
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
Query: 236 IM 237
++
Sbjct: 234 VL 235
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRM-LKHMNHENVIGLLDVFHSNTCLADFKNVYM 147
+G +A+K++ R KR +L + LK + ++ F +NT +V++
Sbjct: 49 TGHVIAVKQMRRSGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGTFITNT------DVFI 101
Query: 148 VTHLMGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNED 204
LMG + + + + + + + I++ L Y+ G+IHRD+KPSNI ++E
Sbjct: 102 AMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER 161
Query: 205 CELKILDFGLA 215
++K+ DFG++
Sbjct: 162 GQIKLCDFGIS 172
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 20/24 (83%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLA 276
+D+KPSNI ++E ++K+ DFG++
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGIS 172
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 107 HAKRTYRELRMLK-HMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKL 165
H R EL+ L +NV+G+ F N + V + +L +IL + L
Sbjct: 62 HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV-----VIAMPYLEHESFLDILNS--L 114
Query: 166 SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTEN 220
S V+ + + + LK IH GI+HRD+KPSN N + ++DFGLA+ T +
Sbjct: 115 SFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 71
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 72 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLAR------PTENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 153 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM-SPESLKDGVF 211
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 212 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 257
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 62
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 63 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 116
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 117 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLAR------PTENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 144 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM-SPESLKDGVF 202
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 203 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 248
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 72 LSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIG 128
L SF ++ D+ SG V VA+K + S A + RE+ + ++H N+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV-------YQILRGL 181
L V + + MVT L A L ++L +L FL+ Q+ G+
Sbjct: 80 LYGVVLTPP-------MKMVTEL--APLGSLL--DRLRKHQGHFLLGTLSRYAVQVAEGM 128
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
Y+ S IHRDL N+ + +KI DFGL R YV + P
Sbjct: 129 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 72 LSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIG 128
L SF ++ D+ SG V VA+K + S A + RE+ + ++H N+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV-------YQILRGL 181
L V + + MVT L A L ++L +L FL+ Q+ G+
Sbjct: 86 LYGVVLTPP-------MKMVTEL--APLGSLL--DRLRKHQGHFLLGTLSRYAVQVAEGM 134
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
Y+ S IHRDL N+ + +KI DFGL R YV + P
Sbjct: 135 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 187
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRT--YR 113
E+ R I + L + SF +++ V +VAIK + ++A +R
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN---EAASMRERIEFLN 99
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQF 172
E ++K N +V+ LL V ++ + ++ LM DL + LR+ + ++
Sbjct: 100 EASVMKEFNCHHVVRLLGV------VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 173 LV-----------YQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
L +I G+ Y+++ +HRDL N V ED +KI DFG+ R
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT------ENEMTGYVATRWYRAPEIMLNWMH 303
F +DL N V ED +KI DFG+ R G + RW +PE + + +
Sbjct: 181 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGVF 239
Query: 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKD 349
+D+ +++ + T + +S++ +++ LL K D
Sbjct: 240 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 285
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 72 LSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIG 128
L SF ++ D+ SG V VA+K + S A + RE+ + ++H N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV-------YQILRGL 181
L V + + MVT L A L ++L +L FL+ Q+ G+
Sbjct: 76 LYGVVLTPP-------MKMVTEL--APLGSLL--DRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
Y+ S IHRDL N+ + +KI DFGL R YV + P
Sbjct: 125 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLN-NILRTQKL----S 166
RE + + H +++ LL+ + S+ L YMV M GADL I++ S
Sbjct: 77 REASICHMLKHPHIVELLETYSSDGML------YMVFEFMDGADLCFEIVKRADAGFVYS 130
Query: 167 DDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLA-RPTENEM 222
+ + QIL L+Y H IIHRD+KP + + +K+ FG+A + E+ +
Sbjct: 131 EAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL 190
Query: 223 T--GYVATRWYRAPEIM 237
G V T + APE++
Sbjct: 191 VAGGRVGTPHFMAPEVV 207
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 165 LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PD 253
Query: 225 YVATRWYRAPEIMLNWM 241
YV R P L WM
Sbjct: 254 YVRKGDARLP---LKWM 267
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 222 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 280
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 281 SDVWSFGVLL 290
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 165 LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PD 248
Query: 225 YVATRWYRAPEIMLNWM 241
YV R P L WM
Sbjct: 249 YVRKGDARLP---LKWM 262
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 217 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 275
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 276 SDVWSFGVLL 285
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 165 LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PD 246
Query: 225 YVATRWYRAPEIMLNWM 241
YV R P L WM
Sbjct: 247 YVRKGDARLP---LKWM 260
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 215 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 273
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 274 SDVWSFGVLL 283
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 170 VQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVA 227
++ ++ +L YIH+ I HRD+KPSNI ++++ +K+ DFG + + ++ G
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRG 212
Query: 228 TRWYRAPEIMLNWMHYNQTGV 248
T + PE N YN V
Sbjct: 213 TYEFMPPEFFSNESSYNGAKV 233
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 43/182 (23%)
Query: 237 MLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAP 295
+LN Y +D+KPSNI ++++ +K+ DFG + + ++ G T + P
Sbjct: 160 VLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPP 219
Query: 296 EIMLNWMHYN--QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS------------ 341
E N YN + DI L + + ++ F KIS I +
Sbjct: 220 EFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHF 279
Query: 342 -LPLLTKK-------------DFRQVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPY 387
PL KK DF ++F NP +RIT+E AL H +
Sbjct: 280 LYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNP--------------AERITSEDALKHEW 325
Query: 388 LS 389
L+
Sbjct: 326 LA 327
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 165 LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224
L+ +H+ +Q+ +G++++ S IHRDL NI ++E +KI DFGLAR +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PD 255
Query: 225 YVATRWYRAPEIMLNWM 241
YV R P L WM
Sbjct: 256 YVRKGDARLP---LKWM 269
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQ 306
+DL NI ++E +KI DFGLAR + + +W APE + + ++ Q
Sbjct: 224 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRVYTIQ 282
Query: 307 TDIHQLNLIM 316
+D+ +++
Sbjct: 283 SDVWSFGVLL 292
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 72 LSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIG 128
L SF ++ D+ SG V VA+K + S A + RE+ + ++H N+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV-------YQILRGL 181
L V + + MVT L A L ++L +L FL+ Q+ G+
Sbjct: 80 LYGVVLTPP-------MKMVTEL--APLGSLL--DRLRKHQGHFLLGTLSRYAVQVAEGM 128
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
Y+ S IHRDL N+ + +KI DFGL R YV + P
Sbjct: 129 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 72 LSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIG 128
L SF ++ D+ SG V VA+K + S A + RE+ + ++H N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV-------YQILRGL 181
L V + + MVT L A L ++L +L FL+ Q+ G+
Sbjct: 76 LYGVVLTPP-------MKMVTEL--APLGSLL--DRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 234
Y+ S IHRDL N+ + +KI DFGL R YV + P
Sbjct: 125 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 113 RELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLN-NILRTQK----LS 166
RE + + H +++ LL+ + S+ L YMV M GADL I++ S
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGML------YMVFEFMDGADLCFEIVKRADAGFVYS 128
Query: 167 DDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLA-RPTENEM 222
+ + QIL L+Y H IIHRD+KP + + +K+ FG+A + E+ +
Sbjct: 129 EAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL 188
Query: 223 T--GYVATRWYRAPEIM 237
G V T + APE++
Sbjct: 189 VAGGRVGTPHFMAPEVV 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 165 LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE---NE 221
LS + + RG+ Y+ IHRDL NI V E+ KI DFGL+R E +
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 222 MTGYVATRW 230
G + RW
Sbjct: 199 TMGRLPVRW 207
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE---NEMTGYVATRW 291
F +DL NI V E+ KI DFGL+R E + G + RW
Sbjct: 163 FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 165 LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE---NE 221
LS + + RG+ Y+ IHRDL NI V E+ KI DFGL+R E +
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 222 MTGYVATRW 230
G + RW
Sbjct: 189 TMGRLPVRW 197
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE---NEMTGYVATRW 291
F +DL NI V E+ KI DFGL+R E + G + RW
Sbjct: 153 FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 197
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 144 NVYMVTHLMGADLNN-----ILRTQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPS 197
+V++ L L+ I + Q + +D + + I++ L+++HS +IHRD+KPS
Sbjct: 107 DVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 166
Query: 198 NIAVNEDCELKILDFGLARPTENEMTGYV--ATRWYRAPE 235
N+ +N ++K DFG++ +++ + + Y APE
Sbjct: 167 NVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPE 206
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 208 KILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCE 267
+++D G P ++ G +A +A L +H + + +D+KPSN+ +N +
Sbjct: 125 QVIDKGQTIP--EDILGKIAVSIVKA----LEHLH---SKLSVIHRDVKPSNVLINALGQ 175
Query: 268 LKILDFGLARPTENEMTGYV--ATRWYRAPEIM---LNWMHYN-QTDIHQLNL 314
+K DFG++ +++ + + Y APE + LN Y+ ++DI L +
Sbjct: 176 VKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGI 228
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 144 NVYMVTHLMGADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
N++M L G L +++ Q L +D + + Q L GL+Y+HS I+H D+K N+ ++
Sbjct: 161 NIFMEL-LEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 219
Query: 203 ED-CELKILDFGLARPTENEMTG-------YV-ATRWYRAPEIMLN 239
D + DFG A + + G Y+ T + APE++L
Sbjct: 220 SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 145 VYMVTHLMGADLNNILRTQKLSDDHVQFLVYQ-ILRGLKYIHSAGIIHRDLKPSNIAVNE 203
+YMV DLN+ L+ +K D + ++ +L + IH GI+H DLKP+N +
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 161
Query: 204 DCELKILDFGLA 215
D LK++DFG+A
Sbjct: 162 DGMLKLIDFGIA 173
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 34/163 (20%)
Query: 254 DLKPSNIAVNEDCELKILDFGLARPTENEMT-----GYVATRWYRAPEIMLNWMHYNQT- 307
DLKP+N + D LK++DFG+A + + V T Y PE + + +
Sbjct: 152 DLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENG 210
Query: 308 ----------DIHQLNLIMEML---GTPPAEFMAKISSDSARKYIN---SLPLLTKKDFR 351
D+ L I+ + TP + + +IS A N P + +KD +
Sbjct: 211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ 270
Query: 352 QVFKGANPQAIXXXXXXXXXXXXKRITAEQALAHPYLSQYSDP 394
V K +RI+ + LAHPY+ + P
Sbjct: 271 DVLKCC-----------LKRDPKQRISIPELLAHPYVQIQTHP 302
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 144 NVYMVTHLMGADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202
N++M L G L +++ Q L +D + + Q L GL+Y+HS I+H D+K N+ ++
Sbjct: 142 NIFMEL-LEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 200
Query: 203 ED-CELKILDFGLARPTENEMTG-------YV-ATRWYRAPEIMLN 239
D + DFG A + + G Y+ T + APE++L
Sbjct: 201 SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 89 SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD--FKNVY 146
+G VA+K + + H +E+ +L+ + HE++I C D K++
Sbjct: 42 TGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHEHIIKY------KGCCEDQGEKSLQ 94
Query: 147 MVTHLMG-ADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205
+V + L + L + + QI G+ Y+H+ IHR+L N+ ++ D
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDR 154
Query: 206 ELKILDFGLAR--PTENEM-----TGYVATRWYRAPEIMLNWMHYNQTGV 248
+KI DFGLA+ P +E G WY APE + + Y + V
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDV 203
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 98 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 215 ARPTENEMTGYVA-------TRWYRAPEIM 237
++ + Y A +WY APE +
Sbjct: 158 SKALRADENXYKAQTHGKWPVKWY-APECI 186
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 45 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 96
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 97 LMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 156
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 205
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 179 GKVPIKWM-ALESILHRIYTHQSDV 202
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 72 LSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIG 128
L SF ++ D+ SG V VA+K + S A + RE+ + ++H N+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV-------YQILRGL 181
L V + + MVT L A L ++L +L FL+ Q+ G+
Sbjct: 86 LYGVVLTPP-------MKMVTEL--APLGSLL--DRLRKHQGHFLLGTLSRYAVQVAEGM 134
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
Y+ S IHRDL N+ + +KI DFGL R
Sbjct: 135 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 169
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 121 MNHENVIGLLDVFHSNTCLADFKNVYMVT--HLMGADLNNILRTQKLSDDHVQFLVYQIL 178
M HEN++G + T + +Y++T H G+ L + L++ L + L Y +
Sbjct: 88 MRHENILGFIAADIKGT--GSWTQLYLITDYHENGS-LYDYLKSTTLDAKSMLKLAYSSV 144
Query: 179 RGLKYIHSA--------GIIHRDLKPSNIAVNEDCELKILDFGLAR---PTENEM----T 223
GL ++H+ I HRDLK NI V ++ I D GLA NE+
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 224 GYVATRWYRAPEIM---LNWMHYN 244
V T+ Y PE++ LN H+
Sbjct: 205 TRVGTKRYMPPEVLDESLNRNHFQ 228
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQ-KLSDDHV 170
E ++ M+H +++ LL V S T + +VT LM G L + + + +
Sbjct: 90 EALIMASMDHPHLVRLLGVCLSPT-------IQLVTQLMPHGCLLEYVHEHKDNIGSQLL 142
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA 227
QI +G+ Y+ ++HRDL N+ V +KI DFGLAR E + Y A
Sbjct: 143 LNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 235 EIMLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA 288
+++LNW G+ + +DL N+ V +KI DFGLAR E + Y A
Sbjct: 140 QLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 456 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 515
Query: 215 A---RPTEN----EMTGYVATRWYRAPEIM 237
+ R EN + G +WY APE +
Sbjct: 516 SKALRADENYYKAQTHGKWPVKWY-APECI 544
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLA---RPTEN----EMTGYVATRWYRAPEIMLNWM 302
F +DL N+ + KI DFGL+ R EN + G +WY APE + +
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK 548
Query: 303 HYNQTDIHQLNLIM 316
+++D+ ++M
Sbjct: 549 FSSKSDVWSFGVLM 562
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGL 129
L++ F ++ A D SG + A+K++ + A +E+ +K ++ H N++
Sbjct: 35 VLAEGGFAFVYE-AQDVGSGREYALKRLLSNEEEKNRA--IIQEVCFMKKLSGHPNIVQF 91
Query: 130 LDVF-----HSNTCLADFKNVYMVTHLMGADLNNILRTQK----LSDDHVQFLVYQILRG 180
S+T A+F ++T L L L+ + LS D V + YQ R
Sbjct: 92 CSAASIGKEESDTGQAEF---LLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 181 LKYIHSAG--IIHRDLKPSNIAVNEDCELKILDFGLA---------------RPTENEMT 223
++++H IIHRDLK N+ ++ +K+ DFG A R E
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 224 GYVATRWYRAPEIM 237
T YR PEI+
Sbjct: 209 TRNTTPMYRTPEII 222
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 70 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 121
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 122 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 181
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 182 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 230
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 144 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 203
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 204 GKVPIKWM-ALESILHRIYTHQSDV 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 48 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 99
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 100 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 159
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 208
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 182 GKVPIKWM-ALESILHRIYTHQSDV 205
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 72 LSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTY-RELRMLKHMNHENVIG 128
L SF ++ D+ SG V VA+K + S A + RE+ + ++H N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 129 LLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLV-------YQILRGL 181
L V + + MVT L A L ++L +L FL+ Q+ G+
Sbjct: 76 LYGVVLTPP-------MKMVTEL--APLGSLL--DRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 182 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
Y+ S IHRDL N+ + +KI DFGL R
Sbjct: 125 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 48 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 99
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 100 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 159
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 208
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 182 GKVPIKWM-ALESILHRIYTHQSDV 205
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 47 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 98
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 99 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 158
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 207
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 181 GKVPIKWM-ALESILHRIYTHQSDV 204
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 9/148 (6%)
Query: 94 AIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMG 153
A+K+ PF+ R E+ +HE V + +Y+ T L G
Sbjct: 86 AVKRSMSPFRGPKDRARKLAEVG-----SHEKVGQHPCCVRLEQAWEEGGILYLQTELCG 140
Query: 154 ADLNNILRTQKLSDDHVQFLVY--QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILD 211
L S Q Y L L ++HS G++H D+KP+NI + K+ D
Sbjct: 141 PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGD 200
Query: 212 FGLARPTENEMTGYV--ATRWYRAPEIM 237
FGL G V Y APE++
Sbjct: 201 FGLLVELGTAGAGEVQEGDPRYMAPELL 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 52 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 103
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 104 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 163
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 212
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 186 GKVPIKWM-ALESILHRIYTHQSDV 209
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 45 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 96
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 156
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 205
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 179 GKVPIKWM-ALESILHRIYTHQSDV 202
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 48 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 99
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 100 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 159
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 208
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 182 GKVPIKWM-ALESILHRIYTHQSDV 205
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 55 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 106
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 107 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 166
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 167 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 215
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 129 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 188
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 189 GKVPIKWM-ALESILHRIYTHQSDV 212
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 45 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 96
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 156
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 205
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 179 GKVPIKWM-ALESILHRIYTHQSDV 202
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 457 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 516
Query: 215 A---RPTEN----EMTGYVATRWYRAPEIM 237
+ R EN + G +WY APE +
Sbjct: 517 SKALRADENYYKAQTHGKWPVKWY-APECI 545
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLA---RPTEN----EMTGYVATRWYRAPEIMLNWM 302
F +DL N+ + KI DFGL+ R EN + G +WY APE + +
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK 549
Query: 303 HYNQTDIHQLNLIM 316
+++D+ ++M
Sbjct: 550 FSSKSDVWSFGVLM 563
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 52 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 103
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 104 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 163
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 212
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 186 GKVPIKWM-ALESILHRIYTHQSDV 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 114 ELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GADLNNILRTQ-KLSDDHV 170
E ++ M+H +++ LL V S T + +VT LM G L + + + +
Sbjct: 67 EALIMASMDHPHLVRLLGVCLSPT-------IQLVTQLMPHGCLLEYVHEHKDNIGSQLL 119
Query: 171 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA 227
QI +G+ Y+ ++HRDL N+ V +KI DFGLAR E + Y A
Sbjct: 120 LNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 235 EIMLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA 288
+++LNW G+ + +DL N+ V +KI DFGLAR E + Y A
Sbjct: 117 QLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 51 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 102
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 103 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 162
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 163 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 211
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 125 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 184
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 185 GKVPIKWM-ALESILHRIYTHQSDV 208
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 103 QSAVHAKRT-YRELRMLKHM--------NHENVIGLLDVFHSNTCLADFKNVYMVTHLMG 153
+SA H T E+++LK + N + V+ L+D F + + +V MV ++G
Sbjct: 65 KSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISG--MNGIHVCMVFEVLG 122
Query: 154 ADL-NNILRT--QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKI 209
L I+++ Q L V+ ++ Q+L+GL Y+HS IIH D+KP NI L
Sbjct: 123 HHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENI-------LMC 175
Query: 210 LDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQT-GVPFYFQDLKPSNIAVNEDCEL 268
+D R E AT W +A + + L P N + +
Sbjct: 176 VDDAYVRRMAAE-----ATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNA---DKIRV 227
Query: 269 KILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMA 328
KI D G A T + TR YR+ E+++ + DI + L T F
Sbjct: 228 KIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEP 287
Query: 329 KISSDSAR 336
D +R
Sbjct: 288 HSGEDYSR 295
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 215 A---RPTEN----EMTGYVATRWYRAPEIM 237
+ R EN + G +WY APE +
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWY-APECI 202
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 215 A---RPTEN----EMTGYVATRWYRAPEIM 237
+ R EN + G +WY APE +
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWY-APECI 202
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK + + + A + RE +++ +++ ++ L+ V + + +V
Sbjct: 38 IDVAIKVLKQGTEKA-DTEEMMREAQIMHQLDNPYIVRLIGVCQAEALM-------LVME 89
Query: 151 LMGAD-LNNIL--RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
+ G L+ L + +++ +V L++Q+ G+KY+ +HRDL N+ +
Sbjct: 90 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYA 149
Query: 208 KILDFGLARPTENEMTGYVAT-------RWYRAPEIM 237
KI DFGL++ + + Y A +WY APE +
Sbjct: 150 KISDFGLSKALGADDSYYTARSAGKWPLKWY-APECI 185
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 98 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 215 A---RPTEN----EMTGYVATRWYRAPEIM 237
+ R EN + G +WY APE +
Sbjct: 158 SKALRADENYYKAQTHGKWPVKWY-APECI 186
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 93 VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM 152
VAIK I + ++ E +++ +++HE ++ L V + ++++T M
Sbjct: 36 VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ------RPIFIITEYM 86
Query: 153 G-ADLNNILRTQKLSDDHVQFL--VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209
L N LR + Q L + ++Y+ S +HRDL N VN+ +K+
Sbjct: 87 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 146
Query: 210 LDFGLARPT-ENEMTGYVATRW---YRAPEIML 238
DFGL+R ++E T +++ + PE+++
Sbjct: 147 SDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLM 179
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT-ENEMTGYVATRW---YRAPEIMLNWMHYN 305
F +DL N VN+ +K+ DFGL+R ++E T +++ + PE+++ +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 306 QTDIHQLNLIM---EMLGTPPAE 325
++DI ++M LG P E
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 112 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 171
Query: 215 A---RPTEN----EMTGYVATRWYRAPEIM 237
+ R EN + G +WY APE +
Sbjct: 172 SKALRADENYYKAQTHGKWPVKWY-APECI 200
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 91 VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150
+ VAIK++ R S K E ++ +++ +V LL + ++T V ++T
Sbjct: 39 IPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQ 90
Query: 151 LMG-ADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207
LM L + +R K + ++ QI +G+ Y+ ++HRDL N+ V +
Sbjct: 91 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 150
Query: 208 KILDFGLAR---PTENEM---TGYVATRWYRAPEIMLNWMHYNQTGVPFY 251
KI DFGLA+ E E G V +W A E +L+ ++ +Q+ V Y
Sbjct: 151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSY 199
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 237 MLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLAR---PTENEM---T 284
+LNW G+ + +DL N+ V +KI DFGLA+ E E
Sbjct: 113 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172
Query: 285 GYVATRWYRAPEIMLNWMHYNQTDI 309
G V +W A E +L+ ++ +Q+D+
Sbjct: 173 GKVPIKWM-ALESILHRIYTHQSDV 196
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 94 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 153
Query: 215 ARPTENEMTGYVA-------TRWYRAPEIM 237
++ + Y A +WY APE +
Sbjct: 154 SKALRADENYYKAQTHGKWPVKWY-APECI 182
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 21/154 (13%)
Query: 110 RTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT--HLMGADLNNILRTQKLSD 167
++ RE+ M HEN++ + + L ++++T H G+ L + L+ ++
Sbjct: 55 QSEREIFSTPGMKHENLLQFIAAEKRGSNLE--VELWLITAFHDKGS-LTDYLKGNIITW 111
Query: 168 DHVQFLVYQILRGLKYIHS-----------AGIIHRDLKPSNIAVNEDCELKILDFGLAR 216
+ + + + RGL Y+H I HRD K N+ + D + DFGLA
Sbjct: 112 NELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAV 171
Query: 217 PTE-----NEMTGYVATRWYRAPEIMLNWMHYNQ 245
E + G V TR Y APE++ +++ +
Sbjct: 172 RFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQR 205
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 253 QDLKPSNIAVNEDCELKILDFGLARPTE-----NEMTGYVATRWYRAPEIMLNWMHYN-- 305
+D K N+ + D + DFGLA E + G V TR Y APE++ +++
Sbjct: 147 RDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRD 206
Query: 306 ---QTDIHQLNLIM 316
+ D++ + L++
Sbjct: 207 AFLRIDMYAMGLVL 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 104 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 163
Query: 215 ARPTENEMTGYVA-------TRWYRAPEIM 237
++ + Y A +WY APE +
Sbjct: 164 SKALRADENYYKAQTHGKWPVKWY-APECI 192
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 156 LNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214
LN L+ + + D ++ LV+Q+ G+KY+ + +HRDL N+ + KI DFGL
Sbjct: 92 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 151
Query: 215 ARPTENEMTGYVA-------TRWYRAPEIM 237
++ + Y A +WY APE +
Sbjct: 152 SKALRADENYYKAQTHGKWPVKWY-APECI 180
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,698,911
Number of Sequences: 62578
Number of extensions: 517185
Number of successful extensions: 4223
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1120
Number of HSP's gapped (non-prelim): 2068
length of query: 427
length of database: 14,973,337
effective HSP length: 102
effective length of query: 325
effective length of database: 8,590,381
effective search space: 2791873825
effective search space used: 2791873825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)