Query psy8260
Match_columns 427
No_of_seqs 371 out of 2587
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 22:46:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8260.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8260hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0660|consensus 100.0 4.9E-66 1.1E-70 480.7 23.9 320 66-426 24-350 (359)
2 KOG0659|consensus 100.0 2E-57 4.4E-62 406.0 18.4 283 65-395 3-291 (318)
3 KOG0663|consensus 100.0 1.8E-56 3.9E-61 411.2 18.6 297 64-404 76-380 (419)
4 KOG0600|consensus 100.0 8.2E-56 1.8E-60 426.2 20.0 301 61-407 114-422 (560)
5 KOG0615|consensus 100.0 9E-56 1.9E-60 416.6 15.7 258 62-391 170-443 (475)
6 KOG0593|consensus 100.0 1.7E-55 3.7E-60 399.9 15.3 280 66-391 4-290 (396)
7 KOG0661|consensus 100.0 1.3E-55 2.8E-60 422.1 14.7 282 64-391 10-297 (538)
8 KOG0575|consensus 100.0 4.6E-53 1E-57 416.5 22.6 262 64-398 18-282 (592)
9 KOG0658|consensus 100.0 3.6E-53 7.8E-58 395.3 16.1 305 65-418 25-344 (364)
10 KOG0594|consensus 100.0 1.3E-51 2.8E-56 385.2 17.8 289 65-394 12-311 (323)
11 KOG0598|consensus 100.0 1.1E-50 2.4E-55 379.4 19.8 261 61-393 22-289 (357)
12 KOG0581|consensus 100.0 2.6E-50 5.7E-55 376.9 19.6 257 64-394 79-344 (364)
13 KOG0033|consensus 100.0 5.6E-52 1.2E-56 366.9 6.6 259 63-391 10-273 (355)
14 KOG0592|consensus 100.0 7.6E-49 1.6E-53 381.0 19.4 274 61-394 70-347 (604)
15 KOG0605|consensus 100.0 1.2E-48 2.6E-53 379.7 20.6 313 61-397 138-457 (550)
16 KOG0595|consensus 100.0 2.9E-48 6.2E-53 366.2 22.1 257 63-391 9-274 (429)
17 KOG0667|consensus 100.0 2.8E-48 6E-53 386.5 23.0 277 64-391 186-508 (586)
18 KOG0583|consensus 100.0 2.4E-47 5.3E-52 375.1 24.0 256 61-390 14-280 (370)
19 KOG0588|consensus 100.0 3.2E-48 7E-53 383.7 17.5 260 63-396 11-274 (786)
20 KOG0665|consensus 100.0 2.1E-48 4.7E-53 356.3 14.8 313 70-425 23-352 (369)
21 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-46 2.5E-51 370.2 26.2 323 64-425 15-338 (343)
22 KOG0662|consensus 100.0 1.9E-47 4E-52 324.0 12.5 278 68-392 6-290 (292)
23 KOG0597|consensus 100.0 4.4E-47 9.5E-52 369.1 16.9 262 65-399 3-265 (808)
24 KOG0616|consensus 100.0 7.4E-47 1.6E-51 342.9 16.9 256 61-392 41-304 (355)
25 KOG0599|consensus 100.0 7.4E-47 1.6E-51 339.1 12.4 264 66-395 19-293 (411)
26 KOG0032|consensus 100.0 2.1E-45 4.6E-50 361.4 23.9 262 60-391 31-299 (382)
27 KOG0580|consensus 100.0 8.6E-47 1.9E-51 333.3 12.3 256 61-391 19-279 (281)
28 KOG0610|consensus 100.0 3E-45 6.5E-50 345.9 21.7 308 57-402 70-409 (459)
29 KOG0666|consensus 100.0 2.6E-46 5.7E-51 341.0 12.8 296 65-394 25-346 (438)
30 KOG0198|consensus 100.0 3.7E-45 8E-50 347.1 19.1 260 64-391 17-282 (313)
31 cd07875 STKc_JNK1 Catalytic do 100.0 3.6E-44 7.9E-49 355.5 26.0 301 63-425 23-360 (364)
32 KOG0578|consensus 100.0 2.8E-45 6E-50 358.8 16.8 255 64-390 273-528 (550)
33 cd07876 STKc_JNK2 Catalytic do 100.0 7.1E-44 1.5E-48 352.7 26.4 296 63-422 20-354 (359)
34 KOG0585|consensus 100.0 5.9E-45 1.3E-49 348.6 17.7 265 63-391 96-378 (576)
35 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.2E-43 2.7E-48 347.5 26.0 298 65-419 1-327 (338)
36 KOG4717|consensus 100.0 1.4E-44 3E-49 348.1 17.9 258 63-396 17-281 (864)
37 KOG0591|consensus 100.0 3.2E-46 7E-51 336.4 6.2 254 63-391 18-282 (375)
38 cd07874 STKc_JNK3 Catalytic do 100.0 1.4E-43 3E-48 350.0 24.1 300 63-424 16-352 (355)
39 KOG0694|consensus 100.0 2E-44 4.3E-49 359.2 17.3 261 60-393 364-632 (694)
40 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2E-43 4.4E-48 338.8 21.2 256 64-388 5-288 (288)
41 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-42 3.4E-47 341.0 26.7 303 63-426 14-339 (343)
42 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-42 2.8E-47 341.6 25.3 322 64-424 15-337 (343)
43 cd07853 STKc_NLK Catalytic dom 100.0 2.6E-42 5.5E-47 343.3 27.2 315 66-422 2-346 (372)
44 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.3E-42 9.2E-47 338.3 28.2 302 63-425 16-340 (345)
45 KOG0669|consensus 100.0 5.5E-45 1.2E-49 323.7 5.0 293 64-394 17-324 (376)
46 PHA03212 serine/threonine kina 100.0 1.3E-42 2.7E-47 347.3 22.6 261 61-394 89-385 (391)
47 cd07862 STKc_CDK6 Catalytic do 100.0 2E-42 4.3E-47 331.7 23.1 264 65-388 2-290 (290)
48 KOG0604|consensus 100.0 5.5E-44 1.2E-48 324.4 11.5 258 64-394 61-331 (400)
49 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.3E-42 2.8E-47 335.6 21.9 262 64-391 5-294 (303)
50 cd07848 STKc_CDKL5 Catalytic d 100.0 1.6E-42 3.5E-47 331.7 22.4 260 65-388 2-287 (287)
51 KOG0582|consensus 100.0 2.4E-42 5.1E-47 328.8 22.7 272 60-393 22-301 (516)
52 KOG0607|consensus 100.0 3.3E-43 7.2E-48 321.7 15.1 281 69-410 83-386 (463)
53 cd07850 STKc_JNK Catalytic dom 100.0 2E-41 4.4E-46 334.4 28.9 300 63-424 15-352 (353)
54 KOG0611|consensus 100.0 2.9E-43 6.2E-48 330.7 13.9 252 63-389 52-307 (668)
55 PTZ00036 glycogen synthase kin 100.0 2.9E-42 6.3E-47 349.8 22.1 267 61-394 63-360 (440)
56 cd05571 STKc_PKB Catalytic dom 100.0 2.7E-42 5.9E-47 336.6 21.0 249 70-391 1-257 (323)
57 KOG4236|consensus 100.0 2.6E-43 5.6E-48 340.1 12.2 252 69-392 569-826 (888)
58 cd07879 STKc_p38delta_MAPK13 C 100.0 2.2E-41 4.8E-46 332.7 25.6 321 64-424 15-336 (342)
59 cd05612 STKc_PRKX_like Catalyt 100.0 5.6E-42 1.2E-46 329.4 20.5 251 65-391 2-260 (291)
60 PTZ00263 protein kinase A cata 100.0 5.6E-42 1.2E-46 335.2 20.4 253 63-391 17-277 (329)
61 PTZ00426 cAMP-dependent protei 100.0 1.2E-41 2.6E-46 334.3 22.8 257 60-391 26-290 (340)
62 cd07868 STKc_CDK8 Catalytic do 100.0 3.8E-41 8.2E-46 327.2 24.8 163 69-239 6-189 (317)
63 cd07863 STKc_CDK4 Catalytic do 100.0 2.2E-41 4.9E-46 323.9 22.8 262 66-388 2-288 (288)
64 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-41 4.1E-46 329.0 22.0 247 72-391 1-253 (312)
65 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.3E-41 2.7E-46 333.2 20.8 259 65-391 2-263 (333)
66 cd05599 STKc_NDR_like Catalyti 100.0 1.1E-41 2.5E-46 337.4 20.0 293 65-391 2-302 (364)
67 KOG0664|consensus 100.0 3E-43 6.4E-48 315.9 6.6 285 66-392 55-350 (449)
68 cd07855 STKc_ERK5 Catalytic do 100.0 6.7E-41 1.5E-45 328.2 23.9 317 64-420 5-330 (334)
69 cd05631 STKc_GRK4 Catalytic do 100.0 3.3E-41 7.1E-46 323.0 20.8 258 66-393 2-269 (285)
70 cd05593 STKc_PKB_gamma Catalyt 100.0 5.1E-41 1.1E-45 328.3 22.2 249 70-391 1-257 (328)
71 cd05596 STKc_ROCK Catalytic do 100.0 3.3E-41 7.1E-46 335.0 20.9 263 60-390 39-309 (370)
72 cd07849 STKc_ERK1_2_like Catal 100.0 2.3E-40 5E-45 324.6 25.8 303 64-424 5-333 (336)
73 cd05589 STKc_PKN Catalytic dom 100.0 7.9E-41 1.7E-45 326.3 21.8 253 66-391 1-263 (324)
74 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-40 2.4E-45 332.6 23.2 296 65-391 2-311 (381)
75 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.7E-40 8E-45 322.3 26.2 294 63-422 9-326 (328)
76 cd05628 STKc_NDR1 Catalytic do 100.0 1.2E-40 2.7E-45 330.1 22.9 290 65-391 2-299 (363)
77 cd05595 STKc_PKB_beta Catalyti 100.0 7E-41 1.5E-45 326.7 20.7 249 70-391 1-257 (323)
78 PTZ00284 protein kinase; Provi 100.0 1.6E-40 3.5E-45 340.0 24.3 284 62-393 127-446 (467)
79 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.6E-40 7.9E-45 323.4 25.7 301 64-426 5-333 (337)
80 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.6E-41 7.8E-46 331.8 18.7 286 65-391 2-291 (350)
81 cd05621 STKc_ROCK2 Catalytic d 100.0 7.5E-41 1.6E-45 332.4 20.9 262 61-390 40-309 (370)
82 cd05629 STKc_NDR_like_fungal C 100.0 6.8E-41 1.5E-45 333.6 19.8 303 65-391 2-311 (377)
83 cd05594 STKc_PKB_alpha Catalyt 100.0 9.1E-41 2E-45 326.0 19.9 249 70-391 1-258 (325)
84 cd05590 STKc_nPKC_eta Catalyti 100.0 1.5E-40 3.3E-45 323.8 21.2 250 70-392 1-260 (320)
85 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.1E-40 6.6E-45 319.8 22.9 260 64-392 6-293 (309)
86 KOG0986|consensus 100.0 1.2E-41 2.5E-46 324.1 12.2 262 60-394 181-455 (591)
87 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-40 2.7E-45 332.3 20.3 300 65-391 2-311 (382)
88 cd05601 STKc_CRIK Catalytic do 100.0 1.2E-40 2.6E-45 325.8 19.3 260 65-391 2-269 (330)
89 cd05608 STKc_GRK1 Catalytic do 100.0 3.9E-40 8.5E-45 314.7 22.4 252 72-392 1-264 (280)
90 KOG0201|consensus 100.0 3.4E-42 7.4E-47 327.4 7.5 253 65-390 14-268 (467)
91 cd05614 STKc_MSK2_N N-terminal 100.0 3.2E-40 6.9E-45 323.0 21.4 255 66-391 2-273 (332)
92 cd06649 PKc_MEK2 Catalytic dom 100.0 5.9E-40 1.3E-44 321.2 23.1 262 61-391 2-307 (331)
93 cd05584 STKc_p70S6K Catalytic 100.0 4E-40 8.6E-45 321.3 21.4 250 70-391 2-262 (323)
94 cd05591 STKc_nPKC_epsilon Cata 100.0 4.9E-40 1.1E-44 320.3 21.6 249 70-391 1-260 (321)
95 cd05598 STKc_LATS Catalytic do 100.0 1.8E-40 3.9E-45 330.4 18.5 299 65-391 2-307 (376)
96 cd05620 STKc_nPKC_delta Cataly 100.0 5.3E-40 1.1E-44 319.5 21.3 249 70-391 1-254 (316)
97 cd05627 STKc_NDR2 Catalytic do 100.0 3.4E-40 7.3E-45 326.6 20.1 291 65-391 2-299 (360)
98 cd05587 STKc_cPKC Catalytic do 100.0 7.1E-40 1.5E-44 319.6 21.5 253 66-391 2-263 (324)
99 cd05622 STKc_ROCK1 Catalytic d 100.0 5.7E-40 1.2E-44 326.2 21.2 264 60-391 39-310 (371)
100 cd07845 STKc_CDK10 Catalytic d 100.0 1.3E-39 2.9E-44 315.3 23.2 277 64-403 7-308 (309)
101 KOG0589|consensus 100.0 6.5E-41 1.4E-45 326.0 14.0 257 64-391 4-264 (426)
102 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-39 2.3E-44 319.2 22.5 250 70-391 1-268 (329)
103 PHA03209 serine/threonine kina 100.0 1E-39 2.2E-44 322.9 22.0 255 62-390 64-356 (357)
104 PHA03211 serine/threonine kina 100.0 1.5E-39 3.3E-44 329.9 23.5 256 63-390 168-460 (461)
105 cd05582 STKc_RSK_N N-terminal 100.0 4.3E-40 9.3E-45 320.3 18.7 250 70-391 2-260 (318)
106 cd05618 STKc_aPKC_iota Catalyt 100.0 1.4E-39 3.1E-44 318.2 22.3 254 70-391 1-268 (329)
107 cd05597 STKc_DMPK_like Catalyt 100.0 1.3E-39 2.9E-44 318.7 21.8 260 65-391 2-272 (331)
108 cd05592 STKc_nPKC_theta_delta 100.0 1.3E-39 2.9E-44 316.7 21.5 249 70-391 1-254 (316)
109 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-39 2.6E-44 317.2 21.3 249 70-391 1-258 (318)
110 KOG0586|consensus 100.0 3.3E-40 7.2E-45 325.8 17.3 259 60-392 52-313 (596)
111 PHA03207 serine/threonine kina 100.0 7.5E-40 1.6E-44 327.8 20.1 262 61-391 89-381 (392)
112 cd07867 STKc_CDC2L6 Catalytic 100.0 3.2E-39 6.9E-44 313.4 23.6 257 69-388 6-317 (317)
113 KOG0671|consensus 100.0 9.4E-40 2E-44 306.0 18.9 280 60-391 85-412 (415)
114 cd05575 STKc_SGK Catalytic dom 100.0 1.4E-39 2.9E-44 317.5 20.6 250 70-392 1-258 (323)
115 cd05619 STKc_nPKC_theta Cataly 100.0 1.7E-39 3.6E-44 316.0 21.2 250 70-392 1-255 (316)
116 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.6E-39 5.6E-44 312.1 22.2 262 64-391 6-292 (301)
117 cd07857 STKc_MPK1 Catalytic do 100.0 8.1E-39 1.7E-43 313.2 26.0 301 66-424 2-331 (332)
118 cd07861 STKc_CDK1_euk Catalyti 100.0 2.5E-39 5.4E-44 309.1 21.7 258 66-388 2-285 (285)
119 PLN00034 mitogen-activated pro 100.0 2.5E-39 5.5E-44 319.5 22.1 260 63-393 73-336 (353)
120 KOG0192|consensus 100.0 3.6E-39 7.7E-44 314.8 22.5 251 59-383 36-297 (362)
121 cd05616 STKc_cPKC_beta Catalyt 100.0 2.6E-39 5.7E-44 315.5 21.6 253 66-391 2-263 (323)
122 cd07839 STKc_CDK5 Catalytic do 100.0 2.2E-39 4.8E-44 309.4 20.0 258 66-388 2-284 (284)
123 KOG0612|consensus 100.0 1.3E-40 2.9E-45 345.7 12.1 275 60-402 71-355 (1317)
124 cd06650 PKc_MEK1 Catalytic dom 100.0 3E-39 6.6E-44 316.4 21.2 262 61-391 2-305 (333)
125 cd05586 STKc_Sck1_like Catalyt 100.0 1.7E-39 3.7E-44 317.7 19.4 248 72-391 1-259 (330)
126 cd07834 STKc_MAPK Catalytic do 100.0 4.6E-39 9.9E-44 314.3 22.1 302 65-423 1-329 (330)
127 cd05604 STKc_SGK3 Catalytic do 100.0 2.5E-39 5.3E-44 316.0 20.1 249 70-391 1-257 (325)
128 cd05605 STKc_GRK4_like Catalyt 100.0 3.3E-39 7.2E-44 309.1 20.3 256 66-391 2-267 (285)
129 KOG0668|consensus 100.0 1.5E-40 3.3E-45 291.7 9.9 282 63-393 37-330 (338)
130 PTZ00283 serine/threonine prot 100.0 4.7E-39 1E-43 330.5 22.5 267 61-391 29-303 (496)
131 cd05102 PTKc_VEGFR3 Catalytic 100.0 8.5E-39 1.8E-43 313.7 23.0 258 59-384 2-329 (338)
132 cd05615 STKc_cPKC_alpha Cataly 100.0 6.4E-39 1.4E-43 312.8 21.8 253 66-391 2-263 (323)
133 cd05602 STKc_SGK1 Catalytic do 100.0 5.1E-39 1.1E-43 313.7 20.6 249 70-391 1-257 (325)
134 cd05623 STKc_MRCK_alpha Cataly 100.0 6E-39 1.3E-43 314.2 21.1 260 65-391 2-272 (332)
135 KOG0574|consensus 100.0 2.6E-41 5.7E-46 306.9 3.4 256 63-392 32-290 (502)
136 PHA03210 serine/threonine kina 100.0 2.8E-39 6E-44 332.9 18.8 266 63-391 147-460 (501)
137 cd05603 STKc_SGK2 Catalytic do 100.0 7.3E-39 1.6E-43 312.0 20.8 249 70-391 1-257 (321)
138 KOG0577|consensus 100.0 4.3E-40 9.4E-45 321.5 11.9 257 63-392 25-285 (948)
139 KOG0690|consensus 100.0 4.1E-40 8.9E-45 302.0 11.0 258 62-392 166-431 (516)
140 cd05624 STKc_MRCK_beta Catalyt 100.0 6.9E-39 1.5E-43 313.7 20.1 260 65-391 2-272 (331)
141 cd05630 STKc_GRK6 Catalytic do 100.0 1.5E-38 3.2E-43 304.7 21.6 256 66-391 2-267 (285)
142 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.1E-38 4.6E-43 311.6 23.2 280 63-400 4-315 (342)
143 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-38 3.3E-43 310.5 22.0 267 68-392 2-314 (327)
144 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-38 2.8E-43 303.7 20.9 253 72-393 1-262 (277)
145 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.8E-38 3.9E-43 310.2 22.3 251 70-392 1-267 (327)
146 PTZ00267 NIMA-related protein 100.0 1.6E-38 3.5E-43 325.8 22.7 256 64-390 67-328 (478)
147 KOG0579|consensus 100.0 4.4E-40 9.5E-45 323.3 10.3 258 63-392 31-296 (1187)
148 cd07841 STKc_CDK7 Catalytic do 100.0 4.6E-38 1E-42 302.6 24.0 266 66-396 2-293 (298)
149 cd05610 STKc_MASTL Catalytic d 100.0 4E-38 8.6E-43 334.2 24.0 166 64-236 4-175 (669)
150 cd05574 STKc_phototropin_like 100.0 1.3E-37 2.9E-42 302.1 25.1 296 65-403 2-307 (316)
151 PF00069 Pkinase: Protein kina 100.0 4.4E-39 9.6E-44 302.6 14.0 254 66-388 1-260 (260)
152 PTZ00266 NIMA-related protein 100.0 5.9E-38 1.3E-42 334.3 24.1 264 60-394 9-304 (1021)
153 cd07860 STKc_CDK2_3 Catalytic 100.0 3E-38 6.6E-43 301.6 19.8 258 66-388 2-284 (284)
154 cd07852 STKc_MAPK15 Catalytic 100.0 1.2E-37 2.6E-42 305.4 24.4 302 63-422 6-334 (337)
155 cd07832 STKc_CCRK Catalytic do 100.0 1.1E-37 2.5E-42 297.6 22.6 256 66-389 2-286 (286)
156 cd06637 STKc_TNIK Catalytic do 100.0 1.4E-37 3.1E-42 294.9 22.8 256 62-388 4-272 (272)
157 cd07837 STKc_CdkB_plant Cataly 100.0 1.5E-37 3.2E-42 298.4 22.6 265 65-389 2-295 (295)
158 cd06625 STKc_MEKK3_like Cataly 100.0 2.1E-37 4.6E-42 292.1 22.8 256 65-388 3-263 (263)
159 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.2E-37 7E-42 294.4 23.9 259 65-388 2-286 (286)
160 cd06615 PKc_MEK Catalytic doma 100.0 2.7E-37 6E-42 299.2 23.7 261 65-394 2-296 (308)
161 cd06619 PKc_MKK5 Catalytic dom 100.0 1E-37 2.2E-42 297.7 20.1 254 65-391 2-259 (279)
162 cd05632 STKc_GRK5 Catalytic do 100.0 1.8E-37 4E-42 297.0 21.8 256 66-391 2-267 (285)
163 cd07843 STKc_CDC2L1 Catalytic 100.0 1.7E-37 3.8E-42 298.0 21.7 262 64-388 5-293 (293)
164 cd08223 STKc_Nek4 Catalytic do 100.0 3.7E-37 8E-42 289.4 23.4 252 66-388 2-257 (257)
165 cd07865 STKc_CDK9 Catalytic do 100.0 2.4E-37 5.2E-42 298.8 22.6 270 64-388 12-310 (310)
166 KOG0596|consensus 100.0 5.3E-38 1.1E-42 305.6 17.7 271 60-394 357-636 (677)
167 KOG1035|consensus 100.0 2.8E-38 6E-43 330.8 16.9 278 63-389 478-875 (1351)
168 cd05096 PTKc_DDR1 Catalytic do 100.0 4.7E-37 1E-41 296.8 23.4 260 62-384 3-300 (304)
169 KOG1989|consensus 100.0 9.7E-38 2.1E-42 320.2 19.0 265 59-385 32-307 (738)
170 cd07866 STKc_BUR1 Catalytic do 100.0 3.5E-37 7.6E-42 297.8 21.8 278 63-388 7-311 (311)
171 cd07844 STKc_PCTAIRE_like Cata 100.0 3.5E-37 7.6E-42 295.4 21.6 259 64-388 5-291 (291)
172 PLN00009 cyclin-dependent kina 100.0 5.2E-37 1.1E-41 294.8 22.7 264 64-392 2-291 (294)
173 cd06645 STKc_MAP4K3 Catalytic 100.0 5.1E-37 1.1E-41 290.4 21.6 255 63-387 8-267 (267)
174 cd06658 STKc_PAK5 Catalytic do 100.0 3.5E-37 7.7E-42 296.2 19.8 258 66-395 24-282 (292)
175 cd08529 STKc_FA2-like Catalyti 100.0 1.8E-36 3.8E-41 284.5 23.8 251 66-388 2-256 (256)
176 cd06636 STKc_MAP4K4_6 Catalyti 100.0 9.9E-37 2.1E-41 291.0 22.3 261 62-388 14-282 (282)
177 cd06631 STKc_YSK4 Catalytic do 100.0 1.6E-36 3.5E-41 286.7 23.4 258 66-388 2-265 (265)
178 cd05106 PTKc_CSF-1R Catalytic 100.0 1E-36 2.2E-41 303.2 23.1 256 60-384 34-367 (374)
179 cd06643 STKc_SLK Catalytic dom 100.0 2.2E-36 4.9E-41 288.7 24.3 252 65-391 6-268 (282)
180 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.6E-37 2.1E-41 291.7 21.6 263 65-394 2-271 (286)
181 cd06654 STKc_PAK1 Catalytic do 100.0 1.7E-36 3.8E-41 291.9 23.3 256 64-391 20-276 (296)
182 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.1E-36 2.5E-41 292.0 21.9 259 64-388 5-291 (291)
183 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.4E-36 5.3E-41 285.1 23.8 260 65-388 2-267 (267)
184 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-36 2.5E-41 302.9 22.7 257 60-385 31-370 (375)
185 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.2E-36 4.9E-41 285.9 23.5 257 66-388 2-267 (267)
186 cd07842 STKc_CDK8_like Catalyt 100.0 8.7E-37 1.9E-41 295.8 21.1 148 66-218 2-162 (316)
187 cd07836 STKc_Pho85 Catalytic d 100.0 1.1E-36 2.4E-41 290.6 21.4 257 66-388 2-284 (284)
188 cd07835 STKc_CDK1_like Catalyt 100.0 6.2E-37 1.3E-41 292.4 19.6 258 66-388 1-283 (283)
189 cd06644 STKc_STK10_LOK Catalyt 100.0 2.6E-36 5.6E-41 289.8 24.0 261 63-393 11-277 (292)
190 cd06611 STKc_SLK_like Catalyti 100.0 1.9E-36 4.1E-41 288.8 22.8 256 64-391 5-268 (280)
191 cd06656 STKc_PAK3 Catalytic do 100.0 1.4E-36 3.1E-41 292.6 22.0 257 64-392 19-276 (297)
192 cd06630 STKc_MEKK1 Catalytic d 100.0 2.1E-36 4.5E-41 286.1 22.6 260 66-389 2-268 (268)
193 cd07831 STKc_MOK Catalytic dom 100.0 3.1E-36 6.7E-41 287.1 23.8 255 66-388 1-282 (282)
194 cd06651 STKc_MEKK3 Catalytic d 100.0 3.4E-36 7.3E-41 285.0 23.9 258 65-389 3-265 (266)
195 KOG4279|consensus 100.0 7.5E-38 1.6E-42 310.4 13.0 249 71-391 582-838 (1226)
196 cd08218 STKc_Nek1 Catalytic do 100.0 2.5E-36 5.4E-41 283.8 22.8 251 66-388 2-256 (256)
197 cd05580 STKc_PKA Catalytic dom 100.0 2.3E-36 5E-41 290.0 23.0 252 65-392 2-261 (290)
198 cd06609 STKc_MST3_like Catalyt 100.0 2E-36 4.3E-41 287.7 22.2 254 65-391 2-257 (274)
199 cd08221 STKc_Nek9 Catalytic do 100.0 3.6E-36 7.7E-41 282.8 23.5 251 66-388 2-256 (256)
200 cd06655 STKc_PAK2 Catalytic do 100.0 1.5E-36 3.2E-41 292.4 21.4 256 64-391 19-275 (296)
201 KOG1290|consensus 100.0 7.8E-37 1.7E-41 293.6 19.0 328 61-394 75-559 (590)
202 cd06616 PKc_MKK4 Catalytic dom 100.0 1.5E-36 3.2E-41 290.7 20.9 258 65-391 5-273 (288)
203 cd06659 STKc_PAK6 Catalytic do 100.0 1.1E-36 2.4E-41 293.4 20.2 257 66-394 23-280 (297)
204 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.1E-36 6.7E-41 287.4 22.9 251 65-391 2-267 (283)
205 KOG0670|consensus 100.0 5.3E-37 1.1E-41 296.3 17.5 285 57-390 425-751 (752)
206 KOG0614|consensus 100.0 1.4E-38 3.1E-43 306.4 5.8 264 57-392 413-684 (732)
207 cd06646 STKc_MAP4K5 Catalytic 100.0 2.7E-36 5.7E-41 285.6 21.2 255 63-387 8-267 (267)
208 cd07833 STKc_CDKL Catalytic do 100.0 2.4E-36 5.3E-41 288.7 21.1 260 65-388 2-288 (288)
209 cd07864 STKc_CDK12 Catalytic d 100.0 2.6E-36 5.5E-41 290.8 21.4 270 61-388 4-302 (302)
210 cd07846 STKc_CDKL2_3 Catalytic 100.0 2E-36 4.4E-41 289.1 20.5 259 65-388 2-286 (286)
211 cd06608 STKc_myosinIII_like Ca 100.0 6.1E-36 1.3E-40 283.4 23.5 261 63-388 5-275 (275)
212 cd08217 STKc_Nek2 Catalytic do 100.0 7E-36 1.5E-40 281.2 23.5 253 66-388 2-265 (265)
213 cd05609 STKc_MAST Catalytic do 100.0 7.7E-36 1.7E-40 288.5 24.3 273 65-392 2-280 (305)
214 cd06629 STKc_MAPKKK_Bck1_like 100.0 8.3E-36 1.8E-40 282.9 24.0 258 66-388 3-272 (272)
215 cd05054 PTKc_VEGFR Catalytic d 100.0 3.6E-36 7.9E-41 295.1 22.2 259 59-385 2-329 (337)
216 KOG0603|consensus 100.0 5.7E-37 1.2E-41 304.4 16.5 242 64-388 322-566 (612)
217 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.7E-36 1.5E-40 286.3 23.5 261 65-391 2-272 (287)
218 cd05064 PTKc_EphR_A10 Catalyti 100.0 1E-35 2.3E-40 281.8 24.3 252 62-384 3-260 (266)
219 cd05035 PTKc_Axl_like Catalyti 100.0 8.4E-36 1.8E-40 282.6 23.6 257 66-385 1-268 (273)
220 cd05578 STKc_Yank1 Catalytic d 100.0 1.9E-36 4.1E-41 285.2 19.0 252 66-388 2-258 (258)
221 cd05577 STKc_GRK Catalytic dom 100.0 4.9E-36 1.1E-40 285.7 21.8 252 72-393 1-262 (277)
222 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-35 2.7E-40 284.4 24.6 256 67-394 22-278 (285)
223 KOG4645|consensus 100.0 2.6E-38 5.6E-43 332.5 6.5 259 66-391 1237-1500(1509)
224 cd08220 STKc_Nek8 Catalytic do 100.0 8E-36 1.7E-40 280.0 22.7 250 66-388 2-256 (256)
225 cd07838 STKc_CDK4_6_like Catal 100.0 9.1E-36 2E-40 284.4 23.4 262 66-388 1-287 (287)
226 cd07829 STKc_CDK_like Catalyti 100.0 4.5E-36 9.8E-41 285.8 21.0 258 66-388 1-282 (282)
227 cd05075 PTKc_Axl Catalytic dom 100.0 9.4E-36 2E-40 282.4 23.1 255 67-385 2-267 (272)
228 cd05118 STKc_CMGC Catalytic do 100.0 2.6E-36 5.6E-41 287.6 19.3 257 67-388 2-283 (283)
229 cd06612 STKc_MST1_2 Catalytic 100.0 7.3E-36 1.6E-40 280.3 22.1 252 63-388 2-256 (256)
230 PTZ00024 cyclin-dependent prot 100.0 6E-36 1.3E-40 293.1 22.2 277 68-395 13-323 (335)
231 cd05633 STKc_GRK3 Catalytic do 100.0 7.9E-36 1.7E-40 284.9 22.1 250 71-392 1-262 (279)
232 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-35 4.2E-40 279.5 24.1 258 65-389 3-265 (265)
233 cd06613 STKc_MAP4K3_like Catal 100.0 1.2E-35 2.6E-40 279.7 22.6 255 63-387 2-262 (262)
234 cd06605 PKc_MAPKK Catalytic do 100.0 5.3E-36 1.1E-40 282.9 20.0 256 65-391 2-263 (265)
235 PLN03225 Serine/threonine-prot 100.0 7.1E-36 1.5E-40 310.1 22.8 284 62-391 130-456 (566)
236 cd08216 PK_STRAD Pseudokinase 100.0 4.8E-36 1E-40 290.8 20.1 267 68-394 6-304 (314)
237 cd08226 PK_STRAD_beta Pseudoki 100.0 5.6E-36 1.2E-40 292.6 20.6 265 71-393 5-316 (328)
238 PHA02988 hypothetical protein; 100.0 9.4E-36 2E-40 285.1 21.6 243 70-384 26-274 (283)
239 cd05061 PTKc_InsR Catalytic do 100.0 2.9E-35 6.2E-40 282.1 24.8 263 59-391 1-286 (288)
240 cd06624 STKc_ASK Catalytic dom 100.0 2.4E-35 5.2E-40 279.3 23.9 251 66-388 10-268 (268)
241 KOG0197|consensus 100.0 3.5E-36 7.6E-41 294.0 18.6 251 57-383 199-455 (468)
242 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 7.1E-36 1.5E-40 285.6 20.0 261 63-393 4-274 (284)
243 cd06640 STKc_MST4 Catalytic do 100.0 9.3E-36 2E-40 283.8 20.6 254 65-391 5-259 (277)
244 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.6E-36 9.9E-41 285.8 18.4 254 65-391 5-259 (277)
245 KOG0194|consensus 100.0 2.8E-36 6E-41 298.9 17.5 283 32-384 121-415 (474)
246 KOG0584|consensus 100.0 1.3E-36 2.9E-41 300.7 15.0 252 67-391 43-302 (632)
247 cd05093 PTKc_TrkB Catalytic do 100.0 3.1E-35 6.7E-40 281.9 24.1 252 62-384 3-274 (288)
248 cd06639 STKc_myosinIIIB Cataly 100.0 3.6E-35 7.8E-40 281.6 24.2 257 62-389 20-291 (291)
249 cd05052 PTKc_Abl Catalytic dom 100.0 3.6E-35 7.7E-40 277.5 23.3 252 60-385 2-258 (263)
250 cd05048 PTKc_Ror Catalytic Dom 100.0 2.6E-35 5.7E-40 281.1 22.5 253 63-385 4-279 (283)
251 cd05062 PTKc_IGF-1R Catalytic 100.0 3.5E-35 7.6E-40 279.7 23.2 256 60-385 2-274 (277)
252 cd06657 STKc_PAK4 Catalytic do 100.0 2.7E-35 5.8E-40 283.2 22.5 253 70-394 26-279 (292)
253 cd05105 PTKc_PDGFR_alpha Catal 100.0 3E-35 6.4E-40 294.6 23.3 255 59-384 32-392 (400)
254 cd06641 STKc_MST3 Catalytic do 100.0 2.9E-35 6.2E-40 280.4 22.1 254 65-391 5-259 (277)
255 cd07840 STKc_CDK9_like Catalyt 100.0 1.5E-35 3.3E-40 282.6 20.1 261 66-388 1-287 (287)
256 cd05606 STKc_beta_ARK Catalyti 100.0 3.8E-35 8.1E-40 280.0 22.6 249 71-391 1-261 (278)
257 cd06638 STKc_myosinIIIA Cataly 100.0 5E-35 1.1E-39 279.6 23.4 257 61-388 15-286 (286)
258 cd06632 STKc_MEKK1_plant Catal 100.0 4.4E-35 9.5E-40 275.1 22.6 251 66-388 2-258 (258)
259 cd05572 STKc_cGK_PKG Catalytic 100.0 3.8E-35 8.3E-40 276.9 22.1 248 72-391 1-258 (262)
260 cd06607 STKc_TAO Catalytic dom 100.0 5.1E-35 1.1E-39 283.1 23.1 256 64-392 15-274 (307)
261 cd08225 STKc_Nek5 Catalytic do 100.0 2.8E-35 6E-40 276.5 20.5 251 66-388 2-257 (257)
262 cd08215 STKc_Nek Catalytic dom 100.0 8.8E-35 1.9E-39 272.4 23.7 251 66-388 2-258 (258)
263 KOG0608|consensus 100.0 2.7E-36 5.9E-41 296.9 13.9 303 61-392 626-935 (1034)
264 cd06626 STKc_MEKK4 Catalytic d 100.0 8.3E-35 1.8E-39 274.3 23.4 258 66-388 2-264 (264)
265 cd05051 PTKc_DDR Catalytic dom 100.0 4.5E-35 9.8E-40 281.3 21.9 260 62-384 3-292 (296)
266 cd05090 PTKc_Ror1 Catalytic do 100.0 8.1E-35 1.8E-39 278.0 23.5 252 64-385 5-279 (283)
267 KOG0193|consensus 100.0 4.1E-36 8.8E-41 295.6 14.7 258 56-384 384-648 (678)
268 PHA03390 pk1 serine/threonine- 100.0 3.9E-35 8.4E-40 278.3 20.9 243 66-389 16-266 (267)
269 cd05049 PTKc_Trk Catalytic dom 100.0 6.1E-35 1.3E-39 278.0 22.3 252 63-384 4-276 (280)
270 cd05611 STKc_Rim15_like Cataly 100.0 5.4E-35 1.2E-39 275.5 21.7 249 70-391 2-257 (260)
271 cd08219 STKc_Nek3 Catalytic do 100.0 5.9E-35 1.3E-39 274.4 21.8 247 66-385 2-252 (255)
272 cd05097 PTKc_DDR_like Catalyti 100.0 8E-35 1.7E-39 280.0 22.8 261 61-384 2-291 (295)
273 cd06917 STKc_NAK1_like Catalyt 100.0 6.6E-35 1.4E-39 277.5 21.8 255 66-392 3-262 (277)
274 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.7E-34 3.7E-39 273.0 24.2 258 64-388 2-264 (264)
275 cd05581 STKc_PDK1 Catalytic do 100.0 5.3E-35 1.1E-39 277.9 20.8 271 65-388 2-280 (280)
276 cd07830 STKc_MAK_like Catalyti 100.0 8E-35 1.7E-39 277.7 21.9 254 66-388 1-283 (283)
277 KOG0983|consensus 100.0 1.2E-35 2.5E-40 267.2 15.0 256 66-392 94-356 (391)
278 cd05033 PTKc_EphR Catalytic do 100.0 1.6E-34 3.5E-39 273.3 23.8 253 63-385 3-261 (266)
279 cd05103 PTKc_VEGFR2 Catalytic 100.0 7.1E-35 1.5E-39 286.7 22.0 256 60-385 3-335 (343)
280 PRK13184 pknD serine/threonine 100.0 7.2E-35 1.6E-39 309.5 23.2 270 64-385 2-285 (932)
281 cd05084 PTKc_Fes Catalytic dom 100.0 1.5E-34 3.3E-39 271.2 22.9 244 70-384 1-248 (252)
282 cd05055 PTKc_PDGFR Catalytic d 100.0 1.6E-34 3.5E-39 279.0 23.8 256 60-384 31-296 (302)
283 cd06647 STKc_PAK_I Catalytic d 100.0 3.5E-35 7.5E-40 282.5 19.0 257 64-392 19-276 (293)
284 cd06623 PKc_MAPKK_plant_like C 100.0 1.5E-34 3.3E-39 272.4 23.0 255 65-391 2-262 (264)
285 cd06635 STKc_TAO1 Catalytic do 100.0 2E-34 4.3E-39 280.3 24.5 257 62-391 23-283 (317)
286 cd05091 PTKc_Ror2 Catalytic do 100.0 1.1E-34 2.4E-39 277.0 22.2 253 63-385 4-279 (283)
287 cd08228 STKc_Nek6 Catalytic do 100.0 1.7E-34 3.8E-39 273.0 23.2 252 64-385 2-261 (267)
288 cd05579 STKc_MAST_like Catalyt 100.0 6.4E-35 1.4E-39 274.7 20.1 257 72-391 1-263 (265)
289 cd05072 PTKc_Lyn Catalytic dom 100.0 1.8E-34 3.9E-39 272.1 23.0 250 60-384 2-256 (261)
290 cd05032 PTKc_InsR_like Catalyt 100.0 2.6E-34 5.6E-39 273.3 23.8 255 60-384 2-273 (277)
291 cd06627 STKc_Cdc7_like Catalyt 100.0 3.5E-34 7.5E-39 268.2 23.7 251 66-388 2-254 (254)
292 cd05108 PTKc_EGFR Catalytic do 100.0 2E-34 4.4E-39 280.0 22.9 254 61-385 4-264 (316)
293 cd06633 STKc_TAO3 Catalytic do 100.0 3.7E-34 8E-39 278.0 24.7 250 66-391 23-279 (313)
294 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.6E-34 5.6E-39 270.4 22.8 246 64-384 4-253 (256)
295 cd05053 PTKc_FGFR Catalytic do 100.0 2.3E-34 4.9E-39 276.2 22.6 258 58-385 6-287 (293)
296 cd05116 PTKc_Syk Catalytic dom 100.0 3.9E-34 8.5E-39 269.4 23.8 245 71-384 2-250 (257)
297 cd05101 PTKc_FGFR2 Catalytic d 100.0 3E-34 6.4E-39 277.2 23.2 257 59-385 10-292 (304)
298 cd05068 PTKc_Frk_like Catalyti 100.0 2.4E-34 5.3E-39 271.4 22.0 250 60-384 2-256 (261)
299 cd05071 PTKc_Src Catalytic dom 100.0 3.6E-34 7.7E-39 270.7 23.0 249 60-384 2-255 (262)
300 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.8E-34 1E-38 268.9 23.4 247 64-385 4-254 (256)
301 cd05094 PTKc_TrkC Catalytic do 100.0 5.1E-34 1.1E-38 273.8 24.0 252 63-385 4-278 (291)
302 cd05613 STKc_MSK1_N N-terminal 100.0 2.4E-34 5.3E-39 275.7 21.4 260 66-392 2-275 (290)
303 cd08530 STKc_CNK2-like Catalyt 100.0 3.4E-34 7.4E-39 268.7 22.0 249 66-388 2-256 (256)
304 cd05089 PTKc_Tie1 Catalytic do 100.0 3.8E-34 8.3E-39 275.6 22.7 248 64-385 2-271 (297)
305 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.5E-34 1.2E-38 271.6 23.4 255 61-385 3-274 (277)
306 cd06634 STKc_TAO2 Catalytic do 100.0 4.7E-34 1E-38 276.6 23.3 257 62-394 13-276 (308)
307 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-34 8E-39 273.5 22.0 256 67-384 7-276 (283)
308 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.9E-34 8.4E-39 276.9 22.3 257 59-385 13-295 (307)
309 cd06606 STKc_MAPKKK Catalytic 100.0 3.9E-34 8.5E-39 267.8 21.6 257 66-388 2-260 (260)
310 cd05095 PTKc_DDR2 Catalytic do 100.0 4.6E-34 1E-38 274.8 22.6 257 62-384 3-292 (296)
311 cd08229 STKc_Nek7 Catalytic do 100.0 3.1E-34 6.8E-39 271.2 21.0 251 64-384 2-260 (267)
312 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.8E-34 1E-38 269.2 22.2 249 60-384 2-255 (260)
313 cd06618 PKc_MKK7 Catalytic dom 100.0 4.1E-34 8.9E-39 275.2 22.0 260 60-392 11-280 (296)
314 cd05122 PKc_STE Catalytic doma 100.0 9.6E-34 2.1E-38 264.1 23.7 248 66-387 2-253 (253)
315 cd05074 PTKc_Tyro3 Catalytic d 100.0 1E-33 2.2E-38 268.6 24.0 257 66-385 1-268 (273)
316 cd00192 PTKc Catalytic domain 100.0 8E-34 1.7E-38 266.5 22.9 246 70-385 1-260 (262)
317 cd05066 PTKc_EphR_A Catalytic 100.0 1.3E-33 2.8E-38 267.4 24.6 253 63-384 3-261 (267)
318 cd05060 PTKc_Syk_like Catalyti 100.0 1.1E-33 2.4E-38 266.2 23.9 245 70-384 1-250 (257)
319 cd05099 PTKc_FGFR4 Catalytic d 100.0 9.9E-34 2.1E-38 275.0 24.3 256 59-384 7-288 (314)
320 cd05059 PTKc_Tec_like Catalyti 100.0 7.8E-34 1.7E-38 267.2 22.6 247 64-385 4-254 (256)
321 cd05100 PTKc_FGFR3 Catalytic d 100.0 6.5E-34 1.4E-38 278.7 22.9 259 57-385 5-289 (334)
322 cd05092 PTKc_TrkA Catalytic do 100.0 8.9E-34 1.9E-38 270.6 23.3 250 64-384 5-276 (280)
323 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-33 2.8E-38 266.2 24.0 245 71-385 2-251 (257)
324 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.3E-34 1.2E-38 268.7 21.3 249 61-384 3-256 (261)
325 cd06614 STKc_PAK Catalytic dom 100.0 5.9E-34 1.3E-38 272.5 21.8 255 63-390 18-275 (286)
326 cd05067 PTKc_Lck_Blk Catalytic 100.0 9.3E-34 2E-38 267.2 22.8 249 60-384 2-255 (260)
327 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.6E-34 1.4E-38 284.8 22.9 258 59-385 32-395 (401)
328 cd05088 PTKc_Tie2 Catalytic do 100.0 7.2E-34 1.6E-38 274.6 22.4 249 63-385 6-276 (303)
329 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-33 3.5E-38 266.0 24.0 251 64-384 2-260 (267)
330 KOG0696|consensus 100.0 1.5E-35 3.4E-40 279.3 10.0 262 60-394 345-615 (683)
331 cd05109 PTKc_HER2 Catalytic do 100.0 1.9E-33 4.2E-38 268.0 24.6 251 62-384 5-263 (279)
332 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.1E-34 9E-39 273.4 20.0 255 65-385 5-279 (284)
333 cd05050 PTKc_Musk Catalytic do 100.0 1.3E-33 2.9E-38 270.3 23.0 254 61-384 2-284 (288)
334 KOG2345|consensus 100.0 4.3E-35 9.3E-40 260.3 11.4 260 60-385 17-296 (302)
335 cd05069 PTKc_Yes Catalytic dom 100.0 1.5E-33 3.2E-38 266.0 22.7 249 60-384 2-255 (260)
336 cd05043 PTK_Ryk Pseudokinase d 100.0 2.6E-33 5.6E-38 267.1 24.1 255 61-384 3-271 (280)
337 cd05039 PTKc_Csk_like Catalyti 100.0 1.3E-33 2.8E-38 265.5 21.5 243 62-384 4-251 (256)
338 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2E-33 4.4E-38 268.4 23.1 254 64-384 4-278 (284)
339 PHA02882 putative serine/threo 100.0 1.2E-33 2.5E-38 272.0 21.6 267 59-384 7-291 (294)
340 cd05082 PTKc_Csk Catalytic dom 100.0 1.3E-33 2.9E-38 265.5 21.5 243 62-384 4-251 (256)
341 cd05576 STKc_RPK118_like Catal 100.0 4.2E-34 9.1E-39 266.4 17.9 227 75-388 4-237 (237)
342 cd05583 STKc_MSK_N N-terminal 100.0 8.4E-34 1.8E-38 271.7 20.4 257 66-393 2-274 (288)
343 KOG4721|consensus 100.0 3.3E-35 7.2E-40 286.3 10.5 243 60-386 120-365 (904)
344 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.7E-33 3.7E-38 266.2 21.9 237 70-385 1-260 (262)
345 KOG1187|consensus 100.0 4E-34 8.6E-39 280.8 18.2 259 56-384 65-347 (361)
346 cd05123 STKc_AGC Catalytic dom 100.0 1.1E-33 2.4E-38 264.5 20.4 244 72-388 1-250 (250)
347 cd05046 PTK_CCK4 Pseudokinase 100.0 2.6E-33 5.6E-38 266.2 23.2 254 62-385 3-272 (275)
348 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.7E-33 3.6E-38 268.2 21.7 236 71-385 2-272 (274)
349 cd05111 PTK_HER3 Pseudokinase 100.0 3.6E-33 7.8E-38 266.4 23.7 251 63-385 6-264 (279)
350 cd08222 STKc_Nek11 Catalytic d 100.0 8.9E-34 1.9E-38 267.2 19.3 251 65-388 1-260 (260)
351 cd05034 PTKc_Src_like Catalyti 100.0 3.5E-33 7.6E-38 263.1 22.9 250 60-384 2-256 (261)
352 cd05045 PTKc_RET Catalytic dom 100.0 3.7E-33 8.1E-38 267.6 23.3 249 66-384 2-281 (290)
353 cd05042 PTKc_Aatyk Catalytic d 100.0 3.8E-33 8.3E-38 264.4 23.0 248 70-384 1-265 (269)
354 cd05056 PTKc_FAK Catalytic dom 100.0 2.9E-33 6.2E-38 265.4 22.1 253 61-385 3-261 (270)
355 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.1E-33 1.3E-37 262.7 24.1 255 61-384 2-262 (268)
356 smart00219 TyrKc Tyrosine kina 100.0 4.5E-33 9.8E-38 261.2 23.0 247 67-384 2-256 (258)
357 cd05065 PTKc_EphR_B Catalytic 100.0 6.6E-33 1.4E-37 262.8 24.1 256 63-385 3-264 (269)
358 KOG0587|consensus 100.0 4.6E-34 1E-38 291.0 17.0 265 62-392 17-289 (953)
359 cd05058 PTKc_Met_Ron Catalytic 100.0 7.2E-33 1.6E-37 261.2 24.0 249 70-385 1-255 (262)
360 cd05073 PTKc_Hck Catalytic dom 100.0 6.6E-33 1.4E-37 261.5 23.7 250 59-384 1-255 (260)
361 cd05040 PTKc_Ack_like Catalyti 100.0 7.7E-33 1.7E-37 260.2 23.4 246 70-384 1-253 (257)
362 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.6E-33 3.5E-38 265.5 18.8 237 70-385 1-256 (258)
363 PF07714 Pkinase_Tyr: Protein 100.0 1.3E-33 2.9E-38 266.6 18.1 248 67-384 2-257 (259)
364 cd05112 PTKc_Itk Catalytic dom 100.0 6.2E-33 1.4E-37 260.7 22.6 247 64-385 4-254 (256)
365 cd05085 PTKc_Fer Catalytic dom 100.0 1.2E-32 2.6E-37 257.9 24.3 242 71-385 2-247 (250)
366 cd05041 PTKc_Fes_like Catalyti 100.0 1.2E-32 2.7E-37 257.9 23.5 243 70-384 1-247 (251)
367 cd05057 PTKc_EGFR_like Catalyt 100.0 2.2E-32 4.7E-37 260.7 25.1 251 62-384 5-263 (279)
368 cd05047 PTKc_Tie Catalytic dom 100.0 1.7E-32 3.7E-37 260.3 23.9 240 71-384 2-263 (270)
369 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.9E-32 4.2E-37 259.7 24.0 248 70-384 1-265 (269)
370 PLN03224 probable serine/threo 100.0 4.6E-33 9.9E-38 282.9 20.8 288 61-390 142-505 (507)
371 cd05083 PTKc_Chk Catalytic dom 100.0 1.1E-32 2.4E-37 259.0 21.2 240 63-384 5-249 (254)
372 KOG4250|consensus 100.0 7.4E-34 1.6E-38 284.5 13.5 253 64-377 13-296 (732)
373 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.3E-32 2.7E-37 258.8 20.7 233 70-384 1-256 (259)
374 KOG0695|consensus 100.0 6.8E-34 1.5E-38 262.0 11.3 266 60-393 246-524 (593)
375 cd05110 PTKc_HER4 Catalytic do 100.0 4.1E-32 8.8E-37 262.3 23.0 251 63-385 6-264 (303)
376 KOG1026|consensus 100.0 4.9E-33 1.1E-37 284.6 17.3 254 59-382 481-755 (774)
377 cd05044 PTKc_c-ros Catalytic d 100.0 2.4E-32 5.1E-37 258.7 20.6 245 70-384 1-265 (269)
378 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.7E-32 1.2E-36 256.5 22.9 249 71-384 2-264 (268)
379 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.8E-32 3.8E-37 261.3 19.3 255 64-384 4-278 (284)
380 KOG1027|consensus 100.0 1.3E-33 2.8E-38 286.5 11.6 246 69-389 514-771 (903)
381 cd08528 STKc_Nek10 Catalytic d 100.0 9.1E-32 2E-36 254.8 22.5 249 66-385 2-266 (269)
382 KOG1151|consensus 100.0 1.6E-33 3.4E-38 267.7 9.1 267 63-390 462-746 (775)
383 KOG1095|consensus 100.0 1.3E-31 2.7E-36 283.3 21.5 252 60-384 688-956 (1025)
384 KOG1167|consensus 100.0 2.7E-32 5.8E-37 259.1 12.0 300 64-390 36-386 (418)
385 KOG1006|consensus 100.0 8.4E-33 1.8E-37 247.9 6.6 258 66-394 66-336 (361)
386 KOG1094|consensus 100.0 1.3E-30 2.7E-35 255.3 19.0 262 56-385 530-800 (807)
387 smart00220 S_TKc Serine/Threon 100.0 9.5E-30 2.1E-34 235.4 20.4 242 76-388 1-244 (244)
388 PLN00181 protein SPA1-RELATED; 100.0 4.5E-31 9.8E-36 286.4 12.8 221 120-391 28-271 (793)
389 KOG4257|consensus 100.0 2E-30 4.3E-35 255.4 15.3 249 60-382 385-642 (974)
390 KOG0576|consensus 100.0 1.3E-31 2.9E-36 265.7 4.9 259 63-391 14-277 (829)
391 KOG4278|consensus 100.0 4E-30 8.7E-35 252.9 14.6 252 57-383 260-517 (1157)
392 KOG0196|consensus 100.0 4E-30 8.6E-35 259.1 11.8 258 59-385 624-887 (996)
393 KOG3653|consensus 100.0 9.3E-29 2E-33 237.6 16.6 252 65-387 211-507 (534)
394 PLN00113 leucine-rich repeat r 100.0 1.6E-28 3.5E-33 272.6 19.4 240 66-385 692-947 (968)
395 KOG0199|consensus 100.0 1.1E-28 2.4E-33 245.9 15.3 259 60-388 106-371 (1039)
396 KOG0984|consensus 100.0 1.1E-28 2.4E-33 214.0 11.5 170 60-237 42-220 (282)
397 KOG1152|consensus 100.0 9.4E-29 2E-33 242.0 12.0 189 65-320 562-763 (772)
398 KOG0200|consensus 100.0 3.8E-27 8.1E-32 247.2 21.5 256 58-384 290-574 (609)
399 cd00180 PKc Catalytic domain o 99.9 3E-26 6.6E-31 206.5 22.5 210 72-386 1-215 (215)
400 KOG2052|consensus 99.9 1.4E-27 3.1E-32 227.9 12.6 166 64-239 211-394 (513)
401 KOG1345|consensus 99.9 1.2E-27 2.5E-32 215.4 9.5 260 64-390 24-292 (378)
402 PRK09188 serine/threonine prot 99.9 2.2E-25 4.8E-30 217.9 15.9 161 63-239 17-194 (365)
403 KOG0590|consensus 99.9 1.3E-26 2.8E-31 240.6 7.2 264 68-392 322-592 (601)
404 KOG1025|consensus 99.9 1.9E-25 4.1E-30 226.3 14.3 247 66-383 698-951 (1177)
405 smart00750 KIND kinase non-cat 99.9 9.8E-25 2.1E-29 193.5 9.7 164 154-389 1-169 (176)
406 smart00221 STYKc Protein kinas 99.9 1.1E-22 2.4E-27 186.3 18.6 197 66-327 1-201 (225)
407 COG0515 SPS1 Serine/threonine 99.9 3E-21 6.4E-26 184.8 21.6 265 66-392 2-282 (384)
408 KOG1024|consensus 99.9 3.2E-22 6.9E-27 188.5 14.1 254 60-384 280-550 (563)
409 cd05147 RIO1_euk RIO kinase fa 99.9 5E-22 1.1E-26 178.6 10.4 139 69-218 2-167 (190)
410 KOG0603|consensus 99.9 3.4E-23 7.4E-28 206.5 3.1 239 71-391 1-249 (612)
411 KOG1165|consensus 99.9 3.9E-21 8.5E-26 178.0 16.2 204 61-326 25-236 (449)
412 KOG1164|consensus 99.9 1.3E-20 2.8E-25 183.7 20.2 260 65-385 19-293 (322)
413 cd05145 RIO1_like RIO kinase f 99.9 3.4E-21 7.4E-26 173.4 13.2 141 69-220 2-169 (190)
414 KOG1163|consensus 99.9 6.9E-21 1.5E-25 169.3 14.3 149 60-219 11-165 (341)
415 PRK10345 hypothetical protein; 99.9 9.9E-21 2.2E-25 172.0 15.0 135 70-215 8-156 (210)
416 KOG0606|consensus 99.8 1.2E-21 2.6E-26 204.4 8.8 238 63-393 82-323 (1205)
417 KOG4158|consensus 99.8 2.7E-19 5.9E-24 169.3 11.6 201 122-381 274-506 (598)
418 PRK10359 lipopolysaccharide co 99.8 1E-18 2.2E-23 159.7 12.9 148 60-218 27-184 (232)
419 PRK12274 serine/threonine prot 99.8 2E-18 4.3E-23 154.7 14.3 133 67-218 5-142 (218)
420 smart00090 RIO RIO-like kinase 99.8 1.3E-18 2.7E-23 161.8 11.4 147 65-220 29-200 (237)
421 KOG1240|consensus 99.8 5.6E-19 1.2E-23 184.9 9.4 252 65-385 24-291 (1431)
422 PF14531 Kinase-like: Kinase-l 99.7 1.3E-18 2.9E-23 163.6 6.5 245 66-376 14-288 (288)
423 cd05144 RIO2_C RIO kinase fami 99.7 1.4E-17 3.1E-22 150.8 11.6 138 66-220 17-177 (198)
424 PRK14879 serine/threonine prot 99.7 5.5E-17 1.2E-21 148.2 13.9 135 70-217 2-143 (211)
425 KOG0590|consensus 99.7 3.6E-19 7.8E-24 185.2 -1.5 263 64-390 20-291 (601)
426 KOG1033|consensus 99.7 3.9E-18 8.4E-23 167.5 5.2 215 109-388 289-515 (516)
427 TIGR03724 arch_bud32 Kae1-asso 99.7 9.8E-17 2.1E-21 145.2 12.3 131 71-217 1-138 (199)
428 PRK09605 bifunctional UGMP fam 99.7 1.7E-16 3.8E-21 165.0 13.6 135 67-218 336-477 (535)
429 cd05119 RIO RIO kinase family, 99.7 1.8E-16 3.9E-21 142.0 11.5 137 69-219 2-165 (187)
430 PRK01723 3-deoxy-D-manno-octul 99.7 6E-16 1.3E-20 144.1 14.2 139 70-217 37-191 (239)
431 KOG1166|consensus 99.6 2.4E-15 5.3E-20 160.2 13.1 196 59-323 693-900 (974)
432 KOG0195|consensus 99.6 8.7E-15 1.9E-19 132.7 9.7 246 59-382 185-439 (448)
433 cd05120 APH_ChoK_like Aminogly 99.5 6.7E-14 1.4E-18 119.6 11.8 130 69-217 3-138 (155)
434 KOG0601|consensus 99.5 1.2E-14 2.5E-19 145.6 7.7 264 61-391 111-385 (524)
435 KOG1023|consensus 99.4 4.1E-13 8.9E-18 134.4 11.4 207 118-384 1-219 (484)
436 KOG0606|consensus 99.4 2E-13 4.2E-18 143.7 3.8 286 64-395 804-1102(1205)
437 KOG0660|consensus 99.4 6.8E-13 1.5E-17 125.1 5.8 120 250-372 146-271 (359)
438 TIGR01982 UbiB 2-polyprenylphe 99.4 4.3E-12 9.2E-17 128.3 12.1 141 70-220 123-309 (437)
439 cd05146 RIO3_euk RIO kinase fa 99.3 5.1E-11 1.1E-15 106.7 12.1 139 70-219 3-175 (197)
440 PRK04750 ubiB putative ubiquin 99.3 5.9E-12 1.3E-16 129.1 6.6 142 65-220 121-316 (537)
441 cd05151 ChoK Choline Kinase (C 99.2 3.1E-11 6.7E-16 106.0 9.1 126 70-217 4-136 (170)
442 KOG0601|consensus 99.1 2.9E-11 6.2E-16 121.5 4.5 149 63-217 264-416 (524)
443 KOG0593|consensus 99.1 2.3E-11 5E-16 112.3 2.2 78 248-325 120-201 (396)
444 KOG0661|consensus 99.0 1.7E-10 3.6E-15 112.5 4.5 95 249-343 130-227 (538)
445 KOG0659|consensus 99.0 1.5E-10 3.3E-15 105.1 3.6 70 251-320 123-196 (318)
446 KOG0667|consensus 99.0 1E-10 2.2E-15 118.2 2.6 80 247-326 307-388 (586)
447 KOG0594|consensus 99.0 1.8E-10 3.8E-15 108.9 3.4 93 250-342 141-237 (323)
448 KOG0663|consensus 99.0 1.8E-10 4E-15 107.7 3.1 74 250-323 198-275 (419)
449 KOG1266|consensus 99.0 6E-10 1.3E-14 104.2 5.8 93 117-210 120-220 (458)
450 COG3642 Mn2+-dependent serine/ 98.9 1.6E-08 3.4E-13 88.2 12.8 129 72-218 4-141 (204)
451 PRK15123 lipopolysaccharide co 98.9 1.8E-08 4E-13 95.1 13.8 127 89-216 44-193 (268)
452 cd05154 ACAD10_11_like Acyl-Co 98.9 1E-08 2.2E-13 93.9 11.4 142 70-217 4-206 (223)
453 KOG0600|consensus 98.9 6.5E-10 1.4E-14 109.1 3.0 74 249-322 238-316 (560)
454 PF01163 RIO1: RIO1 family; I 98.9 9.3E-09 2E-13 91.8 9.7 99 109-218 53-156 (188)
455 PTZ00284 protein kinase; Provi 98.8 5.5E-09 1.2E-13 107.2 4.9 79 249-327 252-346 (467)
456 KOG1243|consensus 98.7 7.7E-08 1.7E-12 98.2 12.1 121 86-217 33-154 (690)
457 PF06293 Kdo: Lipopolysacchari 98.7 1.6E-07 3.4E-12 85.6 12.8 128 88-217 30-170 (206)
458 KOG3087|consensus 98.7 1.5E-07 3.2E-12 81.9 11.7 137 71-216 14-164 (229)
459 KOG0666|consensus 98.7 3.4E-09 7.3E-14 98.4 1.4 76 251-326 154-240 (438)
460 KOG0665|consensus 98.7 5.7E-09 1.2E-13 97.3 2.9 79 249-327 138-218 (369)
461 KOG0664|consensus 98.7 4.1E-09 8.8E-14 96.2 1.0 73 250-322 177-254 (449)
462 PRK09902 hypothetical protein; 98.7 3.1E-07 6.8E-12 82.7 12.6 142 70-216 24-178 (216)
463 KOG3741|consensus 98.6 6.7E-07 1.4E-11 88.9 14.4 135 77-215 288-440 (655)
464 cd07878 STKc_p38beta_MAPK11 Ca 98.6 1.4E-08 3E-13 99.8 2.4 78 249-326 138-216 (343)
465 KOG0658|consensus 98.6 2E-08 4.3E-13 95.4 3.1 80 249-328 145-228 (364)
466 cd07859 STKc_TDY_MAPK_plant Ca 98.6 5.2E-08 1.1E-12 95.2 5.6 31 249-279 123-153 (338)
467 KOG2137|consensus 98.5 7.8E-08 1.7E-12 98.5 4.6 164 176-391 107-271 (700)
468 COG0478 RIO-like serine/threon 98.5 1.3E-06 2.8E-11 80.8 11.1 135 66-216 93-250 (304)
469 KOG0671|consensus 98.4 3.5E-08 7.6E-13 94.1 -1.7 62 265-326 248-309 (415)
470 cd07853 STKc_NLK Catalytic dom 98.4 4.1E-07 8.8E-12 90.5 5.8 80 249-328 123-207 (372)
471 KOG0669|consensus 98.3 4.7E-07 1E-11 82.1 3.6 78 249-326 144-229 (376)
472 KOG0670|consensus 98.3 9.7E-08 2.1E-12 94.4 -1.0 81 249-329 556-638 (752)
473 cd07877 STKc_p38alpha_MAPK14 C 98.3 6.7E-07 1.5E-11 88.0 4.1 51 249-299 140-190 (345)
474 cd07872 STKc_PCTAIRE2 Catalyti 98.3 4.5E-07 9.8E-12 87.6 2.7 50 249-298 124-176 (309)
475 cd07879 STKc_p38delta_MAPK13 C 98.2 7.6E-07 1.6E-11 87.5 2.2 78 250-327 138-216 (342)
476 cd07851 STKc_p38 Catalytic dom 98.2 2.7E-06 5.8E-11 83.6 5.8 79 249-327 138-217 (343)
477 KOG0662|consensus 98.1 1E-06 2.2E-11 76.0 0.9 91 229-319 95-195 (292)
478 cd07880 STKc_p38gamma_MAPK12 C 98.0 4E-06 8.6E-11 82.4 4.3 50 249-298 138-187 (343)
479 cd07855 STKc_ERK5 Catalytic do 98.0 5.7E-06 1.2E-10 80.9 5.2 80 249-328 127-214 (334)
480 cd07849 STKc_ERK1_2_like Catal 98.0 3.3E-06 7.2E-11 82.6 3.2 31 249-279 126-156 (336)
481 cd07834 STKc_MAPK Catalytic do 98.0 3.3E-06 7.1E-11 82.2 2.4 31 249-279 123-153 (330)
482 cd07857 STKc_MPK1 Catalytic do 97.9 5.3E-06 1.1E-10 81.1 3.2 31 249-279 125-155 (332)
483 cd07858 STKc_TEY_MAPK_plant Ca 97.9 6.4E-06 1.4E-10 80.7 3.5 50 249-298 128-180 (337)
484 cd07832 STKc_CCRK Catalytic do 97.9 5E-06 1.1E-10 78.9 2.5 46 249-294 119-168 (286)
485 KOG1290|consensus 97.9 4.6E-06 1E-10 82.2 1.8 91 204-326 390-480 (590)
486 cd07852 STKc_MAPK15 Catalytic 97.9 6.9E-06 1.5E-10 80.4 2.8 31 249-279 127-157 (337)
487 cd07856 STKc_Sty1_Hog1 Catalyt 97.8 4.9E-06 1.1E-10 81.3 1.0 50 249-298 128-177 (328)
488 PF10707 YrbL-PhoP_reg: PhoP r 97.8 0.00052 1.1E-08 61.8 13.6 131 70-214 7-169 (199)
489 COG1718 RIO1 Serine/threonine 97.8 0.00024 5.2E-09 65.3 11.3 137 71-220 55-218 (268)
490 KOG0577|consensus 97.8 5.4E-06 1.2E-10 83.4 0.6 51 249-300 146-196 (948)
491 KOG1035|consensus 97.8 0.00015 3.3E-09 78.8 11.4 202 109-391 227-440 (1351)
492 COG0661 AarF Predicted unusual 97.8 0.00023 4.9E-09 73.2 11.8 142 70-220 131-317 (517)
493 PF06176 WaaY: Lipopolysacchar 97.6 0.00094 2E-08 60.7 12.2 66 144-217 117-183 (229)
494 KOG0599|consensus 97.6 1.2E-05 2.7E-10 73.9 -0.0 52 250-301 144-197 (411)
495 KOG0576|consensus 97.6 1.4E-05 3.1E-10 81.5 -0.2 150 70-239 248-404 (829)
496 PF12260 PIP49_C: Protein-kina 97.5 0.00048 1E-08 61.6 8.5 95 113-216 8-110 (188)
497 KOG0984|consensus 97.5 3.2E-05 6.9E-10 68.6 0.6 80 247-326 167-252 (282)
498 PF01636 APH: Phosphotransfera 97.5 0.00078 1.7E-08 61.7 9.7 137 70-216 3-196 (239)
499 PF13095 FTA2: Kinetochore Sim 97.4 0.0045 9.7E-08 55.6 13.7 133 64-215 37-206 (207)
500 TIGR02172 Fb_sc_TIGR02172 Fibr 97.4 0.0021 4.5E-08 59.3 12.2 28 188-216 154-181 (226)
No 1
>KOG0660|consensus
Probab=100.00 E-value=4.9e-66 Score=480.74 Aligned_cols=320 Identities=50% Similarity=0.824 Sum_probs=290.2
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|...+.+|+|+|| |++++.++.||+.||||++.+.+......++.+||+++|++++|+||+.+++++.. ........+
T Consensus 24 y~~~~~iG~GAyG-vVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p-~~~~~f~Dv 101 (359)
T KOG0660|consen 24 YVLIEPIGRGAYG-VVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRP-PSRDKFNDV 101 (359)
T ss_pred ecccccccCccee-eEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccc-cccccccee
Confidence 3345789999999 55578899999999999999888889999999999999999999999999999976 344566789
Q ss_pred EEEeccCCCCHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC-----
Q psy8260 146 YMVTHLMGADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE----- 219 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~~~-l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~----- 219 (427)
|+|+++|+.||.++++.+. +++++++.+++|+++||+|+|+.+|+||||||+|+|++.+..+||||||+||...
T Consensus 102 YiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~ 181 (359)
T KOG0660|consen 102 YLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED 181 (359)
T ss_pred EEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence 9999999999999999877 9999999999999999999999999999999999999999999999999999873
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..+|.|+.|+||+|||+++.+..|+++. |+||.||+++| ++.++
T Consensus 182 ~~mTeYVaTRWYRAPElll~~~~Yt~ai------DiWSvGCI~AE-----------------mL~gk------------- 225 (359)
T KOG0660|consen 182 GFMTEYVATRWYRAPELLLNSSEYTKAI------DIWSVGCILAE-----------------MLTGK------------- 225 (359)
T ss_pred cchhcceeeeeecCHHHHhccccccchh------hhhhhhHHHHH-----------------HHcCC-------------
Confidence 4568999999999999999999999998 99999999987 44443
Q ss_pred hccCCCCC-CHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQT-DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~~-d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
+.|.+. -+.|+..|+..+|+|+.+....+.++.++.++.+.|..++.+|.++|+..+|+|+|||.+||++||.+|+|
T Consensus 226 --plFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit 303 (359)
T KOG0660|consen 226 --PLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT 303 (359)
T ss_pred --CCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC
Confidence 477777 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCCCCCCCCCcccccCCCCHHHHHHHHhhhcc
Q psy8260 379 AEQALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKGTYSLESL 426 (427)
Q Consensus 379 a~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (427)
|+|+|+|||+..+.+|.++|..++...+.+.. .+.++|+..++.|.+
T Consensus 304 a~eAL~hPYl~~~hdp~dEP~~~~~~~~~~~~-~~~~~~r~~i~~e~~ 350 (359)
T KOG0660|consen 304 AEEALAHPYLAPYHDPEDEPVCQPIFDSFEHE-LTEEELRELIYKEIL 350 (359)
T ss_pred HHHHhcChhhhhhcCCccCCCCCCCCcccccc-ccHHHHHHHHHHHHH
Confidence 99999999999999999999776655445555 899999999988753
No 2
>KOG0659|consensus
Probab=100.00 E-value=2e-57 Score=406.03 Aligned_cols=283 Identities=35% Similarity=0.545 Sum_probs=235.2
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
+|...+.+|+|.||.||+ +.+..||+.||||+++............+|||+.|+.++|+||+.|+++|... .+
T Consensus 3 rY~~~~~lGEG~~gvVyk-a~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~------~~ 75 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYK-ARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK------SN 75 (318)
T ss_pred hhhhhhhhcCcceEEEEE-EEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC------Cc
Confidence 345567899999999996 55888999999999987655444456678999999999999999999998654 45
Q ss_pred EEEEeccCCCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 145 VYMVTHLMGADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
+-+|+|++..||...++.. .++..+++.|+.|+++||+|||++.|+||||||.|+|++.+|.+||+|||+|+......
T Consensus 76 l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 76 LSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred eEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 7899999999999999764 58999999999999999999999999999999999999999999999999999876542
Q ss_pred ---ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 223 ---TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 223 ---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
+..+.|+||+|||++.|.+.|+... |+|+.||+++| + ++
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~V------DmWavGCI~AE-----------------L---------------ll 197 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGV------DMWAVGCIFAE-----------------L---------------LL 197 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcc------hhhhHHHHHHH-----------------H---------------Hc
Confidence 3347899999999999999999887 99999999987 2 23
Q ss_pred hccCCCC-CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQ-TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~-~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
+.+++.+ +|+.||..|+..||||..+-|....+-....-+... +......+|...++++.||+.+||.+||.+|+|
T Consensus 198 r~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~---P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit 274 (318)
T KOG0659|consen 198 RVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQF---PKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT 274 (318)
T ss_pred cCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcC---CCCccccccccccHHHHHHHHhhhccCchhccc
Confidence 3346655 599999999999999998887765432111111122 222233478889999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCC
Q psy8260 379 AEQALAHPYLSQYSDPN 395 (427)
Q Consensus 379 a~e~L~Hp~f~~~~~~~ 395 (427)
|.|+|+||||+..+.|.
T Consensus 275 a~qaL~~~yf~~~P~pt 291 (318)
T KOG0659|consen 275 ASQALKHPYFKSLPLPT 291 (318)
T ss_pred HHHHhcchhhhcCCCCC
Confidence 99999999999755543
No 3
>KOG0663|consensus
Probab=100.00 E-value=1.8e-56 Score=411.18 Aligned_cols=297 Identities=29% Similarity=0.459 Sum_probs=248.8
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|+..++|++|+||.||+ +.|+.|++.||+|+++.........-..+|||++|.+++|||||.+.++..+.. ..
T Consensus 76 ~efe~lnrI~EGtyGiVYR-akdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~----~d 150 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYR-AKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN----MD 150 (419)
T ss_pred HHHHHHhhcccCcceeEEE-eccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc----cc
Confidence 3477889999999999994 778899999999999765433333445689999999999999999999987642 35
Q ss_pred eEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+||||+|+..||..++.. ++|...+++.++.|++.|++|||.+.|+||||||+|+|+++.|.+||+|||+||..++.
T Consensus 151 ~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 151 KIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 6999999999999999975 57999999999999999999999999999999999999999999999999999988775
Q ss_pred ---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 222 ---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 222 ---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
.|..+.|.||+|||++++...|+... |+||.||++++ + +
T Consensus 231 ~k~~T~lVVTLWYRaPELLLG~~tyst~i------DMWSvGCI~aE-----------------~---------------l 272 (419)
T KOG0663|consen 231 LKPYTPLVVTLWYRAPELLLGAKTYSTAV------DMWSVGCIFAE-----------------L---------------L 272 (419)
T ss_pred cccCcceEEEeeecCHHHhcCCcccCcch------hhhhHHHHHHH-----------------H---------------H
Confidence 77889999999999999999999888 99999999977 2 2
Q ss_pred hhccCCCC-CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCC--ChhHHHHHHHhcCCCCCC
Q psy8260 299 LNWMHYNQ-TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGA--NPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 299 ~~~~~~~~-~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~dLi~~mL~~dP~~ 375 (427)
...+.+.+ +++.++..|+.+||+|....|.....-...+.. ..+..+...+...|... |..+.||+.++|.+||.+
T Consensus 273 ~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~-~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~k 351 (419)
T KOG0663|consen 273 TQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKM-TFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGK 351 (419)
T ss_pred hcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhcc-ccCCCCchhhhhhccccccchhHHHHHHHHhccCccc
Confidence 33335554 599999999999999999888776543332211 23444455566666655 499999999999999999
Q ss_pred CCCHHHHhcCCCCCCCCCCCCCCCCCCCC
Q psy8260 376 RITAEQALAHPYLSQYSDPNDEPTSPPYD 404 (427)
Q Consensus 376 R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~ 404 (427)
|+||+|+|+|+||.+.+.|.++...|.|+
T Consensus 352 R~tA~~~L~h~~F~e~P~p~~P~~~Pt~P 380 (419)
T KOG0663|consen 352 RITAEDGLKHEYFRETPLPIDPSMFPTWP 380 (419)
T ss_pred cccHHHhhcccccccCCCCCChhhcCCCc
Confidence 99999999999999987777665555554
No 4
>KOG0600|consensus
Probab=100.00 E-value=8.2e-56 Score=426.22 Aligned_cols=301 Identities=30% Similarity=0.476 Sum_probs=248.6
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
.....|+....||+|.||.||+ +.+..||+.||+|++...........-..|||.||++|+||||++|.+.....
T Consensus 114 r~~~~feki~kIGeGTyg~VYk-Ar~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---- 188 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYK-ARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---- 188 (560)
T ss_pred cchHHHHHHHHhcCcchhheeE-eeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec----
Confidence 3345677788999999999995 67889999999999987665556666778999999999999999999998754
Q ss_pred CCceEEEEeccCCCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLMGADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
....+|||+|||..||..++... +|++.+++.||+|++.||+|||++||+|||||.+|||||.+|.+||+|||||+..
T Consensus 189 ~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 189 LSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred CCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeec
Confidence 23579999999999999999765 6999999999999999999999999999999999999999999999999999965
Q ss_pred CC----CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 219 EN----EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 219 ~~----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
.. ..|..+.|+||+|||+|+|...|+.+. |+|+.||+++| ++.|++
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aV------DlWS~GCIl~E-----------------l~~gkP------- 318 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAV------DLWSVGCILAE-----------------LFLGKP------- 318 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccce------eehhhhHHHHH-----------------HHcCCC-------
Confidence 43 367889999999999999999999888 99999999988 444433
Q ss_pred hHHhhhccCCC-CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCC-CCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 295 PEIMLNWMHYN-QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPL-LTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 295 PEvl~~~~~~~-~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
.+. .+++.||-.|+.+||+|...+|....-.... ...+. .....+.+.|...++.+++|+.+||.+|
T Consensus 319 --------I~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~---~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ld 387 (560)
T KOG0600|consen 319 --------ILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT---IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLD 387 (560)
T ss_pred --------CcCCccHHHHHHHHHHHhCCCChhccccccCCccc---ccCCCCcccchHHHHhccCCHHHHHHHHHHhccC
Confidence 333 4599999999999999999888732111100 01111 1234466678889999999999999999
Q ss_pred CCCCCCHHHHhcCCCCCCCCCCCCCCCCCCCCccc
Q psy8260 373 SEKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSF 407 (427)
Q Consensus 373 P~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~ 407 (427)
|.+|.||.++|+|+||..-+.|.++..-|.++.+.
T Consensus 388 P~kR~tA~~aL~seyF~t~p~~~~p~~Lp~y~~s~ 422 (560)
T KOG0600|consen 388 PDKRGTASSALQSEYFTTEPLPCDPSSLPKYPPSH 422 (560)
T ss_pred ccccccHHHHhcCcccccCCCCCCcccCCCCCcch
Confidence 99999999999999997655666665556665444
No 5
>KOG0615|consensus
Probab=100.00 E-value=9e-56 Score=416.60 Aligned_cols=258 Identities=30% Similarity=0.487 Sum_probs=201.0
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH-----HHHHHHHHHHHHhcCCCCCceeeeeeeecC
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV-----HAKRTYRELRMLKHMNHENVIGLLDVFHSN 136 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~-----~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~ 136 (427)
....|.+.+.||.|+||.|- .+.++.||+.||||++++...... ......+|+++|++|+|||||+++++|...
T Consensus 170 ~~d~yii~~~LGsGafg~Vk-la~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVK-LAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP 248 (475)
T ss_pred hcceeEeeeeecCCceeEEE-EEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence 45567889999999999877 578999999999999976533221 123356999999999999999999999764
Q ss_pred ccccCCceEEEEeccC-CCCHHHHH-hhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC---CCEEEee
Q psy8260 137 TCLADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED---CELKILD 211 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~-g~~L~~~l-~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~---~~~kl~D 211 (427)
...|||+|++ ||+|.+.+ ..+.+.++..+.+++|++.|+.|||++||+||||||+|||+..+ ..+||+|
T Consensus 249 ------ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 249 ------DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ------CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecc
Confidence 4569999999 78887654 66779999999999999999999999999999999999999765 6799999
Q ss_pred CCCCCCCCC--CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccc
Q psy8260 212 FGLARPTEN--EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 289 (427)
Q Consensus 212 FGla~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt 289 (427)
||+|+..++ -+.+.|||+.|.|||
T Consensus 323 FGlAK~~g~~sfm~TlCGTpsYvAPE------------------------------------------------------ 348 (475)
T KOG0615|consen 323 FGLAKVSGEGSFMKTLCGTPSYVAPE------------------------------------------------------ 348 (475)
T ss_pred cchhhccccceehhhhcCCccccChh------------------------------------------------------
Confidence 999987642 234444555555554
Q ss_pred ccccchHHhhhcc--CC-CCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHH-HHhcCCCCCcccHHhhcCCCChhHHHHH
Q psy8260 290 RWYRAPEIMLNWM--HY-NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARK-YINSLPLLTKKDFRQVFKGANPQAIDLL 365 (427)
Q Consensus 290 ~~Y~APEvl~~~~--~~-~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~dLi 365 (427)
|+.+.. ++ .++|+||||+++|++.++..||..........+ .....-.+. ...|..+|.+++|||
T Consensus 349 -------Vl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~----p~~w~~Iseea~dlI 417 (475)
T KOG0615|consen 349 -------VLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFG----PLQWDRISEEALDLI 417 (475)
T ss_pred -------heecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccccc----ChhhhhhhHHHHHHH
Confidence 443321 22 367999999999999888888877765553332 222111111 234567899999999
Q ss_pred HHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 366 SLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 366 ~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
++||+.||++|+|++|+|+||||...
T Consensus 418 ~~mL~VdP~~R~s~~eaL~hpW~~~~ 443 (475)
T KOG0615|consen 418 NWMLVVDPENRPSADEALNHPWFKDA 443 (475)
T ss_pred HHhhEeCcccCcCHHHHhcChhhhcc
Confidence 99999999999999999999999854
No 6
>KOG0593|consensus
Probab=100.00 E-value=1.7e-55 Score=399.92 Aligned_cols=280 Identities=30% Similarity=0.509 Sum_probs=229.8
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|+....+|+|+||.|+ .|.++.||+.||||++..+..++...+-.+|||++|++++|+|+|.|+++|... ..+
T Consensus 4 YE~LgkvGEGSYGvV~-KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk------rkl 76 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVM-KCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRK------RKL 76 (396)
T ss_pred HhhhhccccCcceEEE-EeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhc------cee
Confidence 4555689999999998 578999999999999876655555566678999999999999999999999764 568
Q ss_pred EEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC---C
Q psy8260 146 YMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE---N 220 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~---~ 220 (427)
++|+||+..++.+.+.. +++++..++.+++|++.|+.|||++++||||||||||||+.+|.+||||||+||... .
T Consensus 77 hLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred EEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 99999998877776654 579999999999999999999999999999999999999999999999999999765 3
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
..|.|+.|+||+|||++.|...|.... |+|+.||+++| +.+|.+
T Consensus 157 ~YTDYVATRWYRaPELLvGDtqYG~pV------DiWAiGCv~aE-----------------l~~G~p------------- 200 (396)
T KOG0593|consen 157 NYTDYVATRWYRAPELLVGDTQYGKPV------DIWAIGCVFAE-----------------LLTGEP------------- 200 (396)
T ss_pred hhhhhhhhhhccChhhhcccCcCCCcc------cchhhhHHHHH-----------------HhcCCc-------------
Confidence 467899999999999999988888877 99999999987 444433
Q ss_pred ccCCC-CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCC-CCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 301 WMHYN-QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPL-LTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 301 ~~~~~-~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
+++ .+|+++|-.|...||...+.-..-..+.....-+ .+|. ....++...++.++.-+.||+.+||+.||++|+|
T Consensus 201 --L~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv-~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~s 277 (396)
T KOG0593|consen 201 --LWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV-RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLS 277 (396)
T ss_pred --CCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee-ecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccccc
Confidence 444 4699999999999998776543222111100000 1221 1234566677889999999999999999999999
Q ss_pred HHHHhcCCCCCCC
Q psy8260 379 AEQALAHPYLSQY 391 (427)
Q Consensus 379 a~e~L~Hp~f~~~ 391 (427)
.+|+|.||||+.+
T Consensus 278 c~qll~H~yFd~~ 290 (396)
T KOG0593|consen 278 CEQLLHHPYFDGF 290 (396)
T ss_pred HHHHhcChHHHHH
Confidence 9999999999754
No 7
>KOG0661|consensus
Probab=100.00 E-value=1.3e-55 Score=422.11 Aligned_cols=282 Identities=32% Similarity=0.509 Sum_probs=239.1
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~ 142 (427)
.+|.+.+.+|.|.||.||. +....+|..||||++++.+..-.+. --+||+..|++|+ |||||+|.+++.+..
T Consensus 10 ~RY~~i~klGDGTfGsV~l-a~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~----- 82 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYL-AKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDND----- 82 (538)
T ss_pred HHHHHHHHhcCCcceeEEE-eeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccC-----
Confidence 5677889999999999996 5567899999999998876654332 2369999999999 999999999987643
Q ss_pred ceEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..+|+|||||..+|+++++. ..|++..++.|+.||++||+|+|.+|+.|||+||||||+..+..+||+|||+||...+
T Consensus 83 ~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 83 RILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred ceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 36899999999999999975 4599999999999999999999999999999999999999888999999999998754
Q ss_pred --CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 221 --EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 221 --~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
..|.|+.|+||+|||+|+....|+... |+|+.||+.+| ..
T Consensus 163 kpPYTeYVSTRWYRAPEvLLrs~~Ys~pv------D~wA~GcI~aE-----------------l~--------------- 204 (538)
T KOG0661|consen 163 KPPYTEYVSTRWYRAPEVLLRSGYYSSPV------DMWAVGCIMAE-----------------LY--------------- 204 (538)
T ss_pred CCCcchhhhcccccchHHhhhccccCCch------HHHHHHHHHHH-----------------HH---------------
Confidence 578999999999999999988888776 99999999877 11
Q ss_pred hhccCCCCC-CHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 299 LNWMHYNQT-DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 299 ~~~~~~~~~-d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
.-.++|.+. +++++-.|..+||+|....+... .......-...|......+...++..++++.+||.+||.+||.+||
T Consensus 205 sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg-~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRp 283 (538)
T KOG0661|consen 205 SLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG-YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRP 283 (538)
T ss_pred HhcccCCCCcHHHHHHHHHHHhCCCccccchhH-HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCc
Confidence 112366665 89999999999999987655432 1223333334677777788888888999999999999999999999
Q ss_pred CHHHHhcCCCCCCC
Q psy8260 378 TAEQALAHPYLSQY 391 (427)
Q Consensus 378 ta~e~L~Hp~f~~~ 391 (427)
||+|+|+||||+..
T Consensus 284 TA~~al~~pffq~~ 297 (538)
T KOG0661|consen 284 TASQALQHPFFQVG 297 (538)
T ss_pred cHHHHhcCcccccc
Confidence 99999999999853
No 8
>KOG0575|consensus
Probab=100.00 E-value=4.6e-53 Score=416.47 Aligned_cols=262 Identities=28% Similarity=0.427 Sum_probs=214.9
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC-CCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF-QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
..|..++.||+|||..+|. +.+..+|..||+|++.+.. ....+.++..+||+|++.|+|||||+++++|++.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe-~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs------ 90 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYE-ARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS------ 90 (592)
T ss_pred ceeeeeeeeccCcceEEEE-EEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC------
Confidence 4588999999999999995 5677899999999997643 2345667788999999999999999999999754
Q ss_pred ceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.++||+.|+| .++|..+++. +.++|.+++.+++||+.||.|||+++|||||||..|++++++.+|||+|||||.....
T Consensus 91 ~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 91 NNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred CceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecC
Confidence 6899999999 6888888864 5799999999999999999999999999999999999999999999999999975432
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
+. +...+.||||-|.||||+.+
T Consensus 171 ~~----------------------------------------------------------Erk~TlCGTPNYIAPEVl~k 192 (592)
T KOG0575|consen 171 DG----------------------------------------------------------ERKKTLCGTPNYIAPEVLNK 192 (592)
T ss_pred cc----------------------------------------------------------cccceecCCCcccChhHhcc
Confidence 10 12235678888888888887
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
..+...+|+||+|||+|.|..+.+||..+.-+++..+.....-. +...+|.+|+|||.+||+.||.+|||++
T Consensus 193 ~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~--------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~ 264 (592)
T KOG0575|consen 193 SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS--------MPSHLSAEAKDLIRKLLRPNPSERPSLD 264 (592)
T ss_pred CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc--------cccccCHHHHHHHHHHhcCCcccCCCHH
Confidence 77888999999999999987666666554434444444322211 1235799999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCCC
Q psy8260 381 QALAHPYLSQYSDPNDEP 398 (427)
Q Consensus 381 e~L~Hp~f~~~~~~~~~~ 398 (427)
++|.|+||+....|...|
T Consensus 265 ~vL~h~Ff~~g~~p~~lp 282 (592)
T KOG0575|consen 265 EVLDHPFFKSGFTPARLP 282 (592)
T ss_pred HHhcCHhhhCCCcCCCCC
Confidence 999999997666665443
No 9
>KOG0658|consensus
Probab=100.00 E-value=3.6e-53 Score=395.31 Aligned_cols=305 Identities=30% Similarity=0.533 Sum_probs=241.4
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.+.-.+.+|.|+||.||.+.+. .+++.||||++..... -.-+|+++|+.++|||||+|..+|...... +.-.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~-e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~-d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLR-ETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTES-DEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEc-CCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCC-chhH
Confidence 3556689999999999976654 5699999999864321 123799999999999999999988764322 2334
Q ss_pred EEEEeccCCCCHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC-CCEEEeeCCCCCCC
Q psy8260 145 VYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPT 218 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~-~~~kl~DFGla~~~ 218 (427)
..+|+||+..+|.+.++ +.+++...++.+++||++||.|||+.||+||||||+|+|+|.+ |.+||||||.|+..
T Consensus 97 lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 97 LNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 56899999999999987 4679999999999999999999999999999999999999965 99999999999976
Q ss_pred C--CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 219 E--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 219 ~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
. +...+|..|++|+|||.|.|...|+.+. |+||+||+++| ++.|.+
T Consensus 177 ~~~epniSYicSRyYRaPELifga~~Yt~~I------DiWSaGCV~aE-----------------Ll~g~p--------- 224 (364)
T KOG0658|consen 177 VKGEPNISYICSRYYRAPELIFGATEYTTSI------DIWSAGCVMAE-----------------LLKGQP--------- 224 (364)
T ss_pred ccCCCceeEEEeccccCHHHHcCccccCcee------EEhhhhHHHHH-----------------HhcCCc---------
Confidence 4 3457799999999999999999999888 99999999987 444444
Q ss_pred HhhhccCCCC-CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHh-hcCCCChhHHHHHHHhcCCCCC
Q psy8260 297 IMLNWMHYNQ-TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQ-VFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 297 vl~~~~~~~~-~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
.|.+ +.+.+|-.|+.++|+|+.+........-. ....|......|.+ .+...++++.||+.++|+++|.
T Consensus 225 ------lFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~---~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~ 295 (364)
T KOG0658|consen 225 ------LFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYT---EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPS 295 (364)
T ss_pred ------ccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccc---cccCcccccccceeecccCCCHHHHHHHHHHhccChh
Confidence 5655 47899999999999999877654322110 11234444455545 4567899999999999999999
Q ss_pred CCCCHHHHhcCCCCCCCCCCC-----CCCCCCCCCcccccCCCCHHHHH
Q psy8260 375 KRITAEQALAHPYLSQYSDPN-----DEPTSPPYDQSFEDMDLPVDQWK 418 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 418 (427)
+|.||.|+|.||||+..+.|+ ..+.++-|++...+....-+-|+
T Consensus 296 ~R~~~~~~l~h~fFdelr~~~~~l~~g~~lp~lf~f~~~e~~~~~~~~~ 344 (364)
T KOG0658|consen 296 KRLSALEALAHPFFDELRDPNTKLPNGRPLPPLFNFKRAELGISPELVN 344 (364)
T ss_pred hcCCHHHHhcchhhHHhhCcCccCcCCCcCCCccCchHHHhccchHHHH
Confidence 999999999999999887763 23444555555555555444444
No 10
>KOG0594|consensus
Probab=100.00 E-value=1.3e-51 Score=385.22 Aligned_cols=289 Identities=33% Similarity=0.537 Sum_probs=237.7
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCC-ceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN-VIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~Hpn-Iv~l~~~~~~~~~~~~~~ 143 (427)
.|...+.+|+|.||.||+ +.+..+|+.||+|++......+.......||+.+|++++|+| ||.|+++++.........
T Consensus 12 ~~~~~eklGeGtyg~Vyk-ar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYK-ARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHhCCCCceEEEE-EEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 355556799999999996 567889999999999765443334455789999999999999 999999998765433445
Q ss_pred eEEEEeccCCCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
.+++++|+...+|..++.. ++++...++.+++|++.||+|||+++|+||||||+||||+++|.+||+|||+|+..
T Consensus 91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHh
Confidence 7899999999999999865 35788899999999999999999999999999999999999999999999999965
Q ss_pred CC---CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 219 EN---EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 219 ~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
.- ..+.-++|.||+|||++++...|+... |+|+.||++++ +..+
T Consensus 171 ~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~v------DiWs~GcIfaE-----------------m~~~---------- 217 (323)
T KOG0594|consen 171 SIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSV------DIWSLGCIFAE-----------------MFTR---------- 217 (323)
T ss_pred cCCcccccccEEEeeccCHHHhcCCCcCCCCc------chHhHHHHHHH-----------------HHhC----------
Confidence 42 356678999999999999998898877 99999999987 3332
Q ss_pred HHhhhccCCCCC-CHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCC-cccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 296 EIMLNWMHYNQT-DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLT-KKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 296 Evl~~~~~~~~~-d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
.++|.+. |+.++..|+..+|+|....|.....-.. +....+... ...+....+..++++.||+.+||++||
T Consensus 218 -----~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~--~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p 290 (323)
T KOG0594|consen 218 -----RPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPD--YKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDP 290 (323)
T ss_pred -----CCCCCCCcHHHHHHHHHHHcCCCCccCCCCcccccc--ccccCcCCCCccchHHhccccCccHHHHHHHHhccCc
Confidence 3366554 8999999999999999877776543211 111233333 556777778888999999999999999
Q ss_pred CCCCCHHHHhcCCCCCCCCCC
Q psy8260 374 EKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 374 ~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
++|+||+.+|+||||.....+
T Consensus 291 ~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 291 AKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred ccCcCHHHHhcChhhcccccc
Confidence 999999999999999876443
No 11
>KOG0598|consensus
Probab=100.00 E-value=1.1e-50 Score=379.38 Aligned_cols=261 Identities=26% Similarity=0.386 Sum_probs=214.5
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
....+|++.++||+|+||.|+. +..+.|++.+|+|++++..... ...+...+|..+|..++||.||+|+..|++.
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~-Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~--- 97 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQ-VRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE--- 97 (357)
T ss_pred CChhheeeeeeeeccCCceEEE-EEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC---
Confidence 4457899999999999999995 5566899999999998754333 3456678999999999999999999988765
Q ss_pred cCCceEEEEeccC-CCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
..+|+|++|+ ||+|...++ .+.|+|+.++.|+.+|+.||.|||++|||||||||||||+|.+|+++|+||||++.
T Consensus 98 ---~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 98 ---EKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKE 174 (357)
T ss_pred ---CeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchh
Confidence 5789999988 779988776 56799999999999999999999999999999999999999999999999999974
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
..... ....++|||+.|||||+
T Consensus 175 ~~~~~----------------------------------------------------------~~t~tfcGT~eYmAPEi 196 (357)
T KOG0598|consen 175 DLKDG----------------------------------------------------------DATRTFCGTPEYMAPEI 196 (357)
T ss_pred cccCC----------------------------------------------------------CccccccCCccccChHH
Confidence 32210 01234688888888888
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
+.+..++..+||||||+++|.|.++..||.........+++....... .....|++++|||+++|++||++|+
T Consensus 197 l~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~-------~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 197 LLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPL-------PPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred HhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCC-------CCccCCHHHHHHHHHHhccCHHHhc
Confidence 888889999999999999999988888887766555554444332111 1123789999999999999999996
Q ss_pred ----CHHHHhcCCCCCCCCC
Q psy8260 378 ----TAEQALAHPYLSQYSD 393 (427)
Q Consensus 378 ----ta~e~L~Hp~f~~~~~ 393 (427)
.++++.+||||.....
T Consensus 270 g~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 270 GGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred CCCCChHHhhcCcccccCCH
Confidence 6899999999987643
No 12
>KOG0581|consensus
Probab=100.00 E-value=2.6e-50 Score=376.94 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=204.7
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.+++..+.||+|.-|.|| .+.++.|++.+|+|+|.. ..+....+++.+|+++++..+||+||.+|+.|..+. .
T Consensus 79 ~dle~~~~lG~G~gG~V~-kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~-----~ 151 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVY-KVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG-----E 151 (364)
T ss_pred HHhhhhhhcccCCCcEEE-EEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC-----c
Confidence 456677899999988888 578889999999999953 345666788899999999999999999999998652 1
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.++++|||| +|+|..+++. ++++|.....++.+|++||.|||+ ++||||||||+|||++..|+|||||||.++...+
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn 231 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN 231 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence 489999999 7899999875 679999999999999999999995 9999999999999999999999999999875433
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
. +..+++||..|||||-+.+
T Consensus 232 S------------------------------------------------------------~a~tfvGT~~YMsPERi~g 251 (364)
T KOG0581|consen 232 S------------------------------------------------------------IANTFVGTSAYMSPERISG 251 (364)
T ss_pred h------------------------------------------------------------hcccccccccccChhhhcC
Confidence 2 2234566666666666666
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcC--c---HHHHHHHhc-CCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKIS--S---DSARKYINS-LPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~--~---~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
..|..++||||||+.+.++..+.+|+..... . +........ .|..+.. ..|+++++||++||++||.
T Consensus 252 ~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~-------~fS~ef~~FV~~CL~Kdp~ 324 (364)
T KOG0581|consen 252 ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG-------EFSPEFRSFVSCCLRKDPS 324 (364)
T ss_pred CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc-------cCCHHHHHHHHHHhcCCcc
Confidence 6677888999999999888777666654311 0 111111211 1222211 3689999999999999999
Q ss_pred CCCCHHHHhcCCCCCCCCCC
Q psy8260 375 KRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f~~~~~~ 394 (427)
+|+|++|+|+|||+.+...+
T Consensus 325 ~R~s~~qLl~Hpfi~~~~~~ 344 (364)
T KOG0581|consen 325 ERPSAKQLLQHPFIKKFEDP 344 (364)
T ss_pred cCCCHHHHhcCHHHhhcccc
Confidence 99999999999999986554
No 13
>KOG0033|consensus
Probab=100.00 E-value=5.6e-52 Score=366.91 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=213.8
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|++-+.||+|.|+.|+ .+++..||+.+|+|.++.........+++.+|++|-+.|+|||||+|.+.+...
T Consensus 10 ~d~y~l~e~igkG~FSvVr-Rc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~------ 82 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVR-RCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE------ 82 (355)
T ss_pred chhhhHHHHHccCchHHHH-HHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc------
Confidence 3457788899999998887 578889999999999876555555677888999999999999999999877543
Q ss_pred ceEEEEeccC-CCCHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC---CCCEEEeeCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE---DCELKILDFGLARP 217 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~-~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~---~~~~kl~DFGla~~ 217 (427)
...|++++++ |++|. ++....-++|..+..+++||+.||+|||.+||||||+||+|+|+.. ...+||+|||+|..
T Consensus 83 ~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 83 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence 4678999988 66765 5666667899999999999999999999999999999999999953 45799999999864
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
.... .+..|++|||+||||||
T Consensus 163 l~~g-----------------------------------------------------------~~~~G~~GtP~fmaPEv 183 (355)
T KOG0033|consen 163 VNDG-----------------------------------------------------------EAWHGFAGTPGYLSPEV 183 (355)
T ss_pred eCCc-----------------------------------------------------------cccccccCCCcccCHHH
Confidence 3210 13458899999999999
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
+++.++...+|+|+.|+|+++|..+-.||+++..+.....+....-..+. ..|+.++++|+|||++||..||+||+
T Consensus 184 vrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~----~~w~~is~~Ak~LvrrML~~dP~kRI 259 (355)
T KOG0033|consen 184 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPS----PEWDTVTPEAKSLIRRMLTVNPKKRI 259 (355)
T ss_pred hhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCC----cccCcCCHHHHHHHHHHhccChhhhc
Confidence 99999999999999999999998888888876544444444332222222 35778999999999999999999999
Q ss_pred CHHHHhcCCCCCCC
Q psy8260 378 TAEQALAHPYLSQY 391 (427)
Q Consensus 378 ta~e~L~Hp~f~~~ 391 (427)
||.|+|+|||+.+-
T Consensus 260 ta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 260 TADEALKHPWICNR 273 (355)
T ss_pred cHHHHhCCchhcch
Confidence 99999999999864
No 14
>KOG0592|consensus
Probab=100.00 E-value=7.6e-49 Score=380.97 Aligned_cols=274 Identities=24% Similarity=0.353 Sum_probs=215.4
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHH-HHHHHHHHHHHhcC-CCCCceeeeeeeecCcc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVH-AKRTYRELRMLKHM-NHENVIGLLDVFHSNTC 138 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~-~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~ 138 (427)
....+|.+++.||.|+|..||. |.+..+++.||||++.+.....+. .+-+.+|-.+|.+| +||.|++|+..|++.
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~-A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~-- 146 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVL-AREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE-- 146 (604)
T ss_pred CChhhcchhheeccccceeEEE-eeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc--
Confidence 3456899999999999999995 678889999999998765433222 23355788889999 899999999998764
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
..+|++++|+ +|+|.+++++ +.|++..++.|+.||+.||+|||++|||||||||||||+|.+|++||+|||.|+
T Consensus 147 ----~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 147 ----ESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred ----cceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccc
Confidence 5689999988 7899998865 679999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
.+........+ +.... ........++||-.|++||
T Consensus 223 ~l~~~~~~~~~--------------------------------~~~~~-------------~a~s~~~SFVGTAeYVSPE 257 (604)
T KOG0592|consen 223 ILSPSQKSQEN--------------------------------PVDPN-------------QASSRRSSFVGTAEYVSPE 257 (604)
T ss_pred cCChhhccccC--------------------------------ccCcc-------------cccCcccceeeeecccCHH
Confidence 76543211000 00000 0011246789999999999
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
+|.......++|+|++|||+|.|..+.+||.+.+.--..+++....- .+.++.++.++|||.++|++||.+|
T Consensus 258 lL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y--------~fp~~fp~~a~dLv~KLLv~dp~~R 329 (604)
T KOG0592|consen 258 LLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY--------EFPEGFPEDARDLIKKLLVRDPSDR 329 (604)
T ss_pred HhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc--------cCCCCCCHHHHHHHHHHHccCcccc
Confidence 99999899999999999999988666666765543233333322111 1224567899999999999999999
Q ss_pred CCHHHHhcCCCCCCCCCC
Q psy8260 377 ITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 377 ~ta~e~L~Hp~f~~~~~~ 394 (427)
+|++|+.+||||..+...
T Consensus 330 lt~~qIk~HpFF~~Vdw~ 347 (604)
T KOG0592|consen 330 LTSQQIKAHPFFEGVDWE 347 (604)
T ss_pred ccHHHHhhCcccccCChh
Confidence 999999999999976543
No 15
>KOG0605|consensus
Probab=100.00 E-value=1.2e-48 Score=379.73 Aligned_cols=313 Identities=21% Similarity=0.292 Sum_probs=222.2
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
+..++|++...||+|+||.||. |..+.||..+|+|+++++.... .+.+.+..|-.+|...++|+||+|+..|++.
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrL-arKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~--- 213 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRL-ARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK--- 213 (550)
T ss_pred CCcccchhheeeccccceeEEE-EEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC---
Confidence 4567899999999999999996 5678899999999998754332 2344567899999999999999999998754
Q ss_pred cCCceEEEEeccC-CCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.++|++|||. |||+..+|. ...|++.+++.|+.+++.|++-||+.|+|||||||+|+|||..|++||+||||+..
T Consensus 214 ---~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 214 ---EYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred ---CeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccch
Confidence 6789999987 899998875 46799999999999999999999999999999999999999999999999999964
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceee-ccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYF-QDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
...... +-.|.--+....... ......+.. ...+.. .+-.-+.-.+ -+.........+|||.|||||
T Consensus 291 l~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~w--~~nrr~~a~StVGTPDYiAPE 358 (550)
T KOG0605|consen 291 LDKKHR----IESYRLDEQMQINLS-EAKPSDFPKFNTPRST-----MSRREQLQTW--KRNRRQLAYSTVGTPDYIAPE 358 (550)
T ss_pred hhhhhh----hhhhcchhhhhhhhc-cCCCccccccccccch-----hhHHHHHHHH--HhhhhhhhhcccCCccccchH
Confidence 432111 000100000000000 000000000 000000 0000000000 000112345689999999999
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
|+++..|...+||||||+|+|+|..+.+||.........++..+....+.... -...+++|+|||.+||. ||.+|
T Consensus 359 Vll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~----~~~~s~eA~DLI~rll~-d~~~R 433 (550)
T KOG0605|consen 359 VLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE----EVDLSDEAKDLITRLLC-DPENR 433 (550)
T ss_pred HHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC----cCcccHHHHHHHHHHhc-CHHHh
Confidence 99999999999999999999999777777776665556666655432221110 12357999999999999 99999
Q ss_pred CC---HHHHhcCCCCCCCCCCCCC
Q psy8260 377 IT---AEQALAHPYLSQYSDPNDE 397 (427)
Q Consensus 377 ~t---a~e~L~Hp~f~~~~~~~~~ 397 (427)
+. ++|+.+||||+.+...+.-
T Consensus 434 LG~~G~~EIK~HPfF~~v~W~~l~ 457 (550)
T KOG0605|consen 434 LGSKGAEEIKKHPFFKGVDWDHLR 457 (550)
T ss_pred cCcccHHHHhcCCccccCCcchhh
Confidence 95 9999999999987665433
No 16
>KOG0595|consensus
Probab=100.00 E-value=2.9e-48 Score=366.23 Aligned_cols=257 Identities=26% Similarity=0.437 Sum_probs=210.5
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.+.|.+.+.||.|+|+.||++. ++.++..||||.+.+........+....|+.+|+.++|||||.|+++....
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~-h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~------ 81 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGR-HKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD------ 81 (429)
T ss_pred cccceehhhccCcceEEEEEeE-eccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC------
Confidence 4678889999999999999754 566779999999988766677777788999999999999999999987654
Q ss_pred ceEEEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC------CCEEEeeCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED------CELKILDFGL 214 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~------~~~kl~DFGl 214 (427)
+.+|+||||| ||||..+++.. .++++.++.++.|++.||++||+++||||||||+||||+.+ -.+||+|||+
T Consensus 82 ~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 82 DFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred CeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 5789999999 79999999765 89999999999999999999999999999999999999764 4689999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
||...+. .+..+.||+|.|||
T Consensus 162 AR~L~~~-----------------------------------------------------------~~a~tlcGSplYMA 182 (429)
T KOG0595|consen 162 ARFLQPG-----------------------------------------------------------SMAETLCGSPLYMA 182 (429)
T ss_pred hhhCCch-----------------------------------------------------------hHHHHhhCCccccC
Confidence 9865421 13345688999999
Q ss_pred hHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc-CCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 295 PEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS-LPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 295 PEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
|||+....|+.+.|+||+|.|+|.|.++..||......+... +.+. ....+ ......++...+|+..+|+.||
T Consensus 183 PEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~-~~~k~~~~~~-----~~~~~~s~~~~~Ll~~ll~~~~ 256 (429)
T KOG0595|consen 183 PEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL-YIKKGNEIVP-----VLPAELSNPLRELLISLLQRNP 256 (429)
T ss_pred HHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-HHhccccccC-----chhhhccCchhhhhhHHHhcCc
Confidence 999988889999999999999999988877776544333332 2221 11111 1112356777899999999999
Q ss_pred CCCCCHHHHhcCCCCCCC
Q psy8260 374 EKRITAEQALAHPYLSQY 391 (427)
Q Consensus 374 ~~R~ta~e~L~Hp~f~~~ 391 (427)
..|.+..+.+.||++...
T Consensus 257 ~~~~~~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 257 KDRISFEDFFDHPFLAAN 274 (429)
T ss_pred cccCchHHhhhhhhcccC
Confidence 999999999999999753
No 17
>KOG0667|consensus
Probab=100.00 E-value=2.8e-48 Score=386.49 Aligned_cols=277 Identities=31% Similarity=0.498 Sum_probs=222.6
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-C-----CCceeeeeeeecCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-H-----ENVIGLLDVFHSNT 137 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-H-----pnIv~l~~~~~~~~ 137 (427)
.+|+|.+.||+|.||.|+ .|+|..|++.||||++++. .....+..-|+.+|..|+ | -|+|+++++|...
T Consensus 186 ~rY~V~e~LGkGtFGQVv-k~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr- 260 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVV-KAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR- 260 (586)
T ss_pred EEEEEEEEecccccceeE-EEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc-
Confidence 367899999999999999 5789999999999999753 344556678999999987 4 3899999999765
Q ss_pred cccCCceEEEEeccCCCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC--CCCEEEeeC
Q psy8260 138 CLADFKNVYMVTHLMGADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCELKILDF 212 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~--~~~~kl~DF 212 (427)
.++|||+|+++.+|.++++.+ +|+...++.+++||+.||.+||+.||||+|||||||||.+ ...+||+||
T Consensus 261 -----~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 261 -----NHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred -----cceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEec
Confidence 578999999999999999864 5889999999999999999999999999999999999975 348999999
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
|+|+.......+|+.|++|+|||+|+| ..|+.+. ||||.||+++| +..|.
T Consensus 336 GSSc~~~q~vytYiQSRfYRAPEVILG-lpY~~~I------DmWSLGCIlAE-----------------L~tG~------ 385 (586)
T KOG0667|consen 336 GSSCFESQRVYTYIQSRFYRAPEVILG-LPYDTAI------DMWSLGCILAE-----------------LFTGE------ 385 (586)
T ss_pred ccccccCCcceeeeeccccccchhhcc-CCCCCcc------ceeehhhhHHh-----------------HhcCc------
Confidence 999998888889999999999999998 4566555 99999999988 44443
Q ss_pred cchHHhhhccCCCCC-CHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc-C--CC------------------------
Q psy8260 293 RAPEIMLNWMHYNQT-DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS-L--PL------------------------ 344 (427)
Q Consensus 293 ~APEvl~~~~~~~~~-d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~-~--~~------------------------ 344 (427)
++|.+. ...++++|+.++|.||..+.+..... .++... . +.
T Consensus 386 ---------PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~--~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 454 (586)
T KOG0667|consen 386 ---------PLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKA--HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKAR 454 (586)
T ss_pred ---------cccCCCCHHHHHHHHHHHhCCCCHHHHHhcccc--ceehhccCCceeeeeeecccccccchhhhhhhhhhc
Confidence 367665 78999999999999998876542211 112111 0 00
Q ss_pred ----C--CcccHHhhcC-CCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 345 ----L--TKKDFRQVFK-GANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 345 ----~--~~~~~~~~~~-~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
. ..+.+..... .....+.|||.+||++||.+|+|+.|+|+||||...
T Consensus 455 ~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 455 LERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT 508 (586)
T ss_pred ccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence 0 0011111112 223467899999999999999999999999999853
No 18
>KOG0583|consensus
Probab=100.00 E-value=2.4e-47 Score=375.11 Aligned_cols=256 Identities=30% Similarity=0.445 Sum_probs=203.3
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC---HHHHHHHHHHHHHHhcCC-CCCceeeeeeeecC
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS---AVHAKRTYRELRMLKHMN-HENVIGLLDVFHSN 136 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~---~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~ 136 (427)
...+.|.+++.||+|+||.|+. +.+..+|..||||.+.+.... ....+.+.||+.+++.++ ||||+++++++...
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~-a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKL-AKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred cccCceeeeeeecCCCCeeEEE-eeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 4457899999999999999996 567778999999977664221 123445668999999999 99999999999865
Q ss_pred ccccCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC-CCEEEeeCC
Q psy8260 137 TCLADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED-CELKILDFG 213 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~-~~~kl~DFG 213 (427)
..+|++|||+ ||+|.+.+.. +++.|..++.+++|++.|++|||++||+||||||||||++.+ +++||+|||
T Consensus 93 ------~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 93 ------TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred ------CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 3489999998 6799888765 789999999999999999999999999999999999999999 999999999
Q ss_pred CCCCCC-CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 214 LARPTE-NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 214 la~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
++.... .. ....+.+||+.|
T Consensus 167 ~s~~~~~~~-----------------------------------------------------------~~l~t~cGsp~Y 187 (370)
T KOG0583|consen 167 LSAISPGED-----------------------------------------------------------GLLKTFCGSPAY 187 (370)
T ss_pred cccccCCCC-----------------------------------------------------------CcccCCCCCccc
Confidence 987542 11 123345666666
Q ss_pred cchHHhhhcc-CC-CCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCC-ChhHHHHHHHhc
Q psy8260 293 RAPEIMLNWM-HY-NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGA-NPQAIDLLSLML 369 (427)
Q Consensus 293 ~APEvl~~~~-~~-~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~dLi~~mL 369 (427)
+|||++.+.. |. ...|+||+|+++|.|.++..||.+.......++....... +...+ |+++++||++||
T Consensus 188 ~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~--------~p~~~~S~~~~~Li~~mL 259 (370)
T KOG0583|consen 188 AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFK--------IPSYLLSPEARSLIEKML 259 (370)
T ss_pred CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCcc--------CCCCcCCHHHHHHHHHHc
Confidence 6666666655 43 3459999999999998888888765433334332222111 11234 999999999999
Q ss_pred CCCCCCCCCHHHHhcCCCCCC
Q psy8260 370 ELDSEKRITAEQALAHPYLSQ 390 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~Hp~f~~ 390 (427)
+.||.+|+|+.|+++||||+.
T Consensus 260 ~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 260 VPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCCcccCCCHHHHhhChhhcc
Confidence 999999999999999999987
No 19
>KOG0588|consensus
Probab=100.00 E-value=3.2e-48 Score=383.72 Aligned_cols=260 Identities=29% Similarity=0.413 Sum_probs=211.0
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCc-CCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP-FQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~-~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
-|.|++|+.||+|+-|.|-. +.+..||+.+|||+|.+. .........+.+||-+|+-+.||||++||++|+..
T Consensus 11 iGpwkLgkTLG~Gstg~vrl-akh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~----- 84 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRL-AKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK----- 84 (786)
T ss_pred ccceeccccccCCCCceehh-hhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccC-----
Confidence 37799999999999999874 668899999999999765 33344456678999999999999999999999764
Q ss_pred CceEEEEeccC-CCCHHHH-HhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNI-LRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~-l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..+|++.||+ ||.|.++ ++++++++.++.++++||+.|+.|||..+|+||||||+|+|+|..+.+||+|||+|....
T Consensus 85 -~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~ 163 (786)
T KOG0588|consen 85 -QHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV 163 (786)
T ss_pred -ceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc
Confidence 4677777776 6766655 567889999999999999999999999999999999999999998889999999985321
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
+. .++.+-||+|.|.||||++
T Consensus 164 ~g-----------------------------------------------------------klLeTSCGSPHYA~PEIV~ 184 (786)
T KOG0588|consen 164 PG-----------------------------------------------------------KLLETSCGSPHYAAPEIVS 184 (786)
T ss_pred CC-----------------------------------------------------------ccccccCCCcccCCchhhc
Confidence 11 1344567888888888888
Q ss_pred hccCCC-CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYN-QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~-~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
+.+|.. ++|+||+|+|++-|.++..||.+.+-.....|.... .+ ++...++++|+|||.+||++||++|+|
T Consensus 185 G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G--~f------~MPs~Is~eaQdLLr~ml~VDp~~RiT 256 (786)
T KOG0588|consen 185 GRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRG--VF------EMPSNISSEAQDLLRRMLDVDPSTRIT 256 (786)
T ss_pred CCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcC--cc------cCCCcCCHHHHHHHHHHhccCcccccc
Confidence 887766 459999999999999999888765433333322211 11 233578999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCC
Q psy8260 379 AEQALAHPYLSQYSDPND 396 (427)
Q Consensus 379 a~e~L~Hp~f~~~~~~~~ 396 (427)
.+|+++|||+..+..+..
T Consensus 257 ~~eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 257 TEEILKHPFLSGYTSLPS 274 (786)
T ss_pred HHHHhhCchhhcCCCCCh
Confidence 999999999998766543
No 20
>KOG0665|consensus
Probab=100.00 E-value=2.1e-48 Score=356.33 Aligned_cols=313 Identities=42% Similarity=0.748 Sum_probs=260.3
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEe
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~ 149 (427)
..+|.|.- +++.+.|..+++.||+|++..++....+.++..||..++..++|+||++++.+|...........+|++|
T Consensus 23 ~p~~~g~~--~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~ 100 (369)
T KOG0665|consen 23 KPIGSGAQ--IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVM 100 (369)
T ss_pred cccCCCCc--eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHH
Confidence 45566654 4557899999999999999888888888889999999999999999999999998777777778899999
Q ss_pred ccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC--Ccccccc
Q psy8260 150 HLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN--EMTGYVA 227 (427)
Q Consensus 150 e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~--~~~~~~g 227 (427)
|++..+|...+. -.++-..++.++.|+++|++|||+.||+||||||+||++..++.+||.|||+|+.... ..+.++.
T Consensus 101 e~m~~nl~~vi~-~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVv 179 (369)
T KOG0665|consen 101 ELMDANLCQVIL-MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVV 179 (369)
T ss_pred HhhhhHHHHHHH-HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccccCchhh
Confidence 999999998876 4577888999999999999999999999999999999999999999999999987654 4678999
Q ss_pred cccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCC
Q psy8260 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQT 307 (427)
Q Consensus 228 t~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~ 307 (427)
|+.|+|||++++.. |.+.. |+|+.||+++| +..+.+ ++++.
T Consensus 180 tRyyrapevil~~~-~ke~v------diwSvGci~gE-----------------li~~~V---------------lf~g~ 220 (369)
T KOG0665|consen 180 TRYYRAPEVILGMG-YKENV------DIWSVGCIMGE-----------------LILGTV---------------LFPGK 220 (369)
T ss_pred eeeccCchheeccC-Ccccc------hhhhhhhHHHH-----------------HhhceE---------------EecCc
Confidence 99999999999866 66555 99999999987 433433 66665
Q ss_pred -CHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCC------------CChhHHHHHHHhcCCCCC
Q psy8260 308 -DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKG------------ANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 308 -d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~s~~~~dLi~~mL~~dP~ 374 (427)
-+.|++.+...+|+|...|..... ...+.+...++......+.+.|+. -+..|+||+.+||..||+
T Consensus 221 d~idQ~~ki~~~lgtpd~~F~~qL~-~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe 299 (369)
T KOG0665|consen 221 DHIDQWNKIIEQLGTPDPSFMKQLQ-PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPE 299 (369)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHhh-HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChh
Confidence 589999999999999999988763 456666666665555555544432 246799999999999999
Q ss_pred CCCCHHHHhcCCCCCCCCCCCC--CCCCCCCCcccccCCCCHHHHHHHHhhhc
Q psy8260 375 KRITAEQALAHPYLSQYSDPND--EPTSPPYDQSFEDMDLPVDQWKGTYSLES 425 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
+|++++++|+||||+-|..+.+ +|.+++++..+...+.++++|+..++.|.
T Consensus 300 ~Risv~daL~HPY~~vw~~~~ev~ap~pe~~d~~~d~~~~t~~e~ke~If~ev 352 (369)
T KOG0665|consen 300 KRISVDDALRHPYIKVWYDPDEVEAPPPEIYDKQLDEREHTIEEWKELIFKEV 352 (369)
T ss_pred hcccHHHHhcCCeeeeecccccccCCCCchhhhhcccccCCHHHHHHHHHHHH
Confidence 9999999999999986555433 34444677778888888999999998774
No 21
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-46 Score=370.22 Aligned_cols=323 Identities=60% Similarity=0.978 Sum_probs=244.5
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||.|+||.||. +.+..+++.||||++............+.+|+++|+.++||||++++++|..........
T Consensus 15 ~~y~~~~~lg~G~~g~V~~-~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCS-AYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhheecccCCCeEEEE-EEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 4678889999999999996 556778999999998765444444566779999999999999999999886544333445
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 144 NVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
.+|+++++++++|.++++...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......+
T Consensus 94 ~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 173 (343)
T cd07878 94 EVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMT 173 (343)
T ss_pred cEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcC
Confidence 68999999999999998888899999999999999999999999999999999999999999999999999987666666
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
.++||++|+|||++.+...++.. .|+|+.||++.+ +..|.. .
T Consensus 174 ~~~~t~~y~aPE~~~~~~~~~~~------~DiwslG~il~e-----------------l~~g~~---------------p 215 (343)
T cd07878 174 GYVATRWYRAPEIMLNWMHYNQT------VDIWSVGCIMAE-----------------LLKGKA---------------L 215 (343)
T ss_pred CccccccccCchHhcCCccCCch------hhhHhHHHHHHH-----------------HHHCCC---------------C
Confidence 66778888888877653333332 266666665544 111111 1
Q ss_pred CCCC-CHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 304 YNQT-DIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 304 ~~~~-d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
+... ....+..+....+.++.++...........+....+..+...+...+...++.+.|||.+||++||.+|+|++|+
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~el 295 (343)
T cd07878 216 FPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEA 295 (343)
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 1111 223344444445555555555444444445555555555566667777889999999999999999999999999
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCcccccCCCCHHHHHHHHhhhc
Q psy8260 383 LAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKGTYSLES 425 (427)
Q Consensus 383 L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
|+||||.+...|...+...+.+.+.....-.+.+|.+..+.+.
T Consensus 296 l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (343)
T cd07878 296 LAHPYFSQYHDPEDEPEAEPYDESPENKERTIEEWKELTYEEV 338 (343)
T ss_pred hcCcchhccCCCccccccCccccchhhhhccHHHHHHHHHHHH
Confidence 9999999988887777666776666666777777877765543
No 22
>KOG0662|consensus
Probab=100.00 E-value=1.9e-47 Score=324.03 Aligned_cols=278 Identities=29% Similarity=0.515 Sum_probs=231.0
Q ss_pred eccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 68 ~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
-.+.||+|.+|+||+ +.+..+++.||+|.+.....++......+|||.+|+.++|.|||+++++.+++ ..+-+
T Consensus 6 kmekigegtygtvfk-arn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd------kkltl 78 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFK-ARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------KKLTL 78 (292)
T ss_pred HHHhhcCCcceeeEe-cccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC------ceeEE
Confidence 346799999999995 67888999999999976655555566788999999999999999999998765 45789
Q ss_pred EeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc---
Q psy8260 148 VTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM--- 222 (427)
Q Consensus 148 v~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~--- 222 (427)
|+++|..+|..+... +.++.+.++.++.|+++||.|||++++.||||||.|+||+.+|++|++|||+||.++-..
T Consensus 79 vfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcy 158 (292)
T KOG0662|consen 79 VFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY 158 (292)
T ss_pred eHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEee
Confidence 999999999888754 568999999999999999999999999999999999999999999999999999876553
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
+..+.|.||++|.++.|.+.|+.+. |+|++||+++| +++. +++
T Consensus 159 saevvtlwyrppdvlfgakly~tsi------dmwsagcifae-----lana--------------------------grp 201 (292)
T KOG0662|consen 159 SAEVVTLWYRPPDVLFGAKLYSTSI------DMWSAGCIFAE-----LANA--------------------------GRP 201 (292)
T ss_pred eceeeeeeccCcceeeeeehhccch------HhhhcchHHHH-----Hhhc--------------------------CCC
Confidence 3457899999999999999999887 99999999987 1211 234
Q ss_pred CCCCCCH-HHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCC-CcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 303 HYNQTDI-HQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLL-TKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 303 ~~~~~d~-~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
.+++.|+ .+|-.|+..+|+|..+-|.....-...+ ..|.+ ....|.++.+.++...+||+.++|.-+|.+|++|+
T Consensus 202 lfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk---~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisae 278 (292)
T KOG0662|consen 202 LFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK---PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAE 278 (292)
T ss_pred CCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc---ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHH
Confidence 7777775 5788999999999987776543211111 12222 22357888888999999999999999999999999
Q ss_pred HHhcCCCCCCCC
Q psy8260 381 QALAHPYLSQYS 392 (427)
Q Consensus 381 e~L~Hp~f~~~~ 392 (427)
++|+||||++..
T Consensus 279 aalqhpyf~d~s 290 (292)
T KOG0662|consen 279 AALQHPYFSDFS 290 (292)
T ss_pred HHhcCccccccC
Confidence 999999998753
No 23
>KOG0597|consensus
Probab=100.00 E-value=4.4e-47 Score=369.11 Aligned_cols=262 Identities=26% Similarity=0.407 Sum_probs=217.9
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|.+-..+|+|+||.||++. .+.|.+.||+|.+.+........+...+|+++++.++|||||.++++|++. .+
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgr-rK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~------~~ 75 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGR-RKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS------AH 75 (808)
T ss_pred chhHHHHhcCCccceeeecc-cccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc------ce
Confidence 46777899999999999765 567899999999998877788888899999999999999999999999765 57
Q ss_pred EEEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 145 VYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
+++|.||+-|+|..++.. ++++|+.++.++.|++.||.|||+++|+|||+||.|||++.+|.+|+||||+||.+....
T Consensus 76 ~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t- 154 (808)
T KOG0597|consen 76 LWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT- 154 (808)
T ss_pred EEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc-
Confidence 899999998899999864 689999999999999999999999999999999999999999999999999998654321
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
.+.+..-|||.|||||++.+.+|
T Consensus 155 ---------------------------------------------------------~vltsikGtPlYmAPElv~e~py 177 (808)
T KOG0597|consen 155 ---------------------------------------------------------SVLTSIKGTPLYMAPELVEEQPY 177 (808)
T ss_pred ---------------------------------------------------------eeeeeccCcccccCHHHHcCCCc
Confidence 02344568999999999998889
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHh
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQAL 383 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L 383 (427)
...+|+||||||+|++-.+.+||....-....+.+....+.++ ...|..+++||..+|++||.+|+|..+++
T Consensus 178 d~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p--------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll 249 (808)
T KOG0597|consen 178 DHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP--------STASSSFVNFLQGLLIKDPAQRLTWTDLL 249 (808)
T ss_pred cchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc--------ccccHHHHHHHHHHhhcChhhcccHHHHh
Confidence 9999999999999999666666655433334444433333322 25789999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCC
Q psy8260 384 AHPYLSQYSDPNDEPT 399 (427)
Q Consensus 384 ~Hp~f~~~~~~~~~~~ 399 (427)
.|||.++-..-.+.+.
T Consensus 250 ~HpF~k~~~~~~~~~~ 265 (808)
T KOG0597|consen 250 GHPFWKGKINIAELPA 265 (808)
T ss_pred cChHHhhhhhhhcccc
Confidence 9999986544333333
No 24
>KOG0616|consensus
Probab=100.00 E-value=7.4e-47 Score=342.89 Aligned_cols=256 Identities=27% Similarity=0.366 Sum_probs=210.3
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
....+|++.+++|.|+||.|-. +.++.+|..+|+|++.+... ...+.+...+|.++|+.+.||.+++|++.|.+.
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~L-Vr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~--- 116 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHL-VREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN--- 116 (355)
T ss_pred cchhhhhheeeeccCccceEEE-EEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC---
Confidence 3446788899999999999995 56778899999999876432 223445567899999999999999999887643
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.++||+|++. ||.|.+++++ ++|++..++.++.||+.||+|||+++||+|||||||||+|.+|.+||+|||.|+.
T Consensus 117 ---~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~ 193 (355)
T KOG0616|consen 117 ---SNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKR 193 (355)
T ss_pred ---CeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEE
Confidence 6799999998 7899998875 6899999999999999999999999999999999999999999999999999986
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
..... .+.||||.|+|||+
T Consensus 194 v~~rT-------------------------------------------------------------~TlCGTPeYLAPEi 212 (355)
T KOG0616|consen 194 VSGRT-------------------------------------------------------------WTLCGTPEYLAPEI 212 (355)
T ss_pred ecCcE-------------------------------------------------------------EEecCCccccChHH
Confidence 54332 24467777788888
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
+....+...+|||+||+++|+|..+..||.+........+++...-.++ ...|++++|||+++|+.|-.+|.
T Consensus 213 i~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP--------~~fs~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 213 IQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP--------SYFSSDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred hhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC--------cccCHHHHHHHHHHHhhhhHhhh
Confidence 8778888899999999999998777777766655445555554333322 34689999999999999999994
Q ss_pred -----CHHHHhcCCCCCCCC
Q psy8260 378 -----TAEQALAHPYLSQYS 392 (427)
Q Consensus 378 -----ta~e~L~Hp~f~~~~ 392 (427)
..+++.+||||....
T Consensus 285 gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 285 GNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred cCcCCCccccccCccccccc
Confidence 578999999998654
No 25
>KOG0599|consensus
Probab=100.00 E-value=7.4e-47 Score=339.09 Aligned_cols=264 Identities=27% Similarity=0.399 Sum_probs=200.4
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC-----CCH-HHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcc
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF-----QSA-VHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTC 138 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~-----~~~-~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~ 138 (427)
|+-.+.+|.|.-+.|. .+..+.+|...|+|++.... ... .-.+...+|+.||+++ .||+|+++.++|+++
T Consensus 19 y~pkeilgrgvss~vr-Rci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~-- 95 (411)
T KOG0599|consen 19 YEPKEILGRGVSSVVR-RCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD-- 95 (411)
T ss_pred cChHHHhcccchhhhh-hhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc--
Confidence 4445678888766555 56778899999999885321 111 2234567899999997 899999999999875
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
..+++|++++ .|.|.+++... .+++...+.+|+|++.|+.|||.++|+||||||+|||++++.++||+|||.|+
T Consensus 96 ----sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 96 ----AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFAC 171 (411)
T ss_pred ----chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceee
Confidence 3468899988 68899888654 69999999999999999999999999999999999999999999999999998
Q ss_pred CCCC--CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 217 PTEN--EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 217 ~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
.... .....|||+.|+|||++..+.. .+.+ +
T Consensus 172 ~l~~GekLrelCGTPgYLAPEtikC~m~-----------------------------------------e~~p---G--- 204 (411)
T KOG0599|consen 172 QLEPGEKLRELCGTPGYLAPETIKCSMY-----------------------------------------ENHP---G--- 204 (411)
T ss_pred ccCCchhHHHhcCCCcccChhheeeecc-----------------------------------------cCCC---C---
Confidence 7654 4566789999999998753211 1111 1
Q ss_pred hHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 295 PEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 295 PEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|...+|+|++|+|++.|..+.+|||-...---.+......-.+. +..|..+|.+++|||++||+.||.
T Consensus 205 --------Ys~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~----speWadis~~~KdLIsrlLqVdp~ 272 (411)
T KOG0599|consen 205 --------YSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFR----SPEWADISATVKDLISRLLQVDPT 272 (411)
T ss_pred --------ccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccC----CcchhhccccHHHHHHHHHeeCch
Confidence 55667999999999988666666764321111122211111222 234567899999999999999999
Q ss_pred CCCCHHHHhcCCCCCCCCCCC
Q psy8260 375 KRITAEQALAHPYLSQYSDPN 395 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f~~~~~~~ 395 (427)
+|+|++|+|+||||.++....
T Consensus 273 ~Ritake~LaHpff~q~~~~~ 293 (411)
T KOG0599|consen 273 KRITAKEALAHPFFIQIAQQQ 293 (411)
T ss_pred hcccHHHHhcChHHHHHHHhc
Confidence 999999999999997654433
No 26
>KOG0032|consensus
Probab=100.00 E-value=2.1e-45 Score=361.38 Aligned_cols=262 Identities=27% Similarity=0.452 Sum_probs=215.8
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHHHhcCC-CCCceeeeeeeecCc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRMLKHMN-HENVIGLLDVFHSNT 137 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~ 137 (427)
+-....|.+++.||.|+||.||. +.+..||+.+|+|.+.+..... .....+.+|+.+|+++. |||||+++++|+..
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~-~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~- 108 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYL-CREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP- 108 (382)
T ss_pred ccccccEEehhhhCCCCceEEEE-EEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC-
Confidence 44556789999999999999995 6778899999999997654322 23456789999999998 99999999999865
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC----CCCEEEeeC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE----DCELKILDF 212 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~----~~~~kl~DF 212 (427)
..+|++||++ ||.|.+.+....+++..+..+++|++.|+.|||+.||+||||||||+|+.. ++.+|++||
T Consensus 109 -----~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DF 183 (382)
T KOG0032|consen 109 -----DSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDF 183 (382)
T ss_pred -----CeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeC
Confidence 4689999999 788877664435999999999999999999999999999999999999863 357999999
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
|+|...... ....+.+||+.|
T Consensus 184 Gla~~~~~~-----------------------------------------------------------~~~~~~~Gtp~y 204 (382)
T KOG0032|consen 184 GLAKFIKPG-----------------------------------------------------------ERLHTIVGTPEY 204 (382)
T ss_pred CCceEccCC-----------------------------------------------------------ceEeeecCCccc
Confidence 999754321 133456788888
Q ss_pred cchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 293 RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 293 ~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
+||||+....+...+|+||+|+|.|+|..+..||+.........+.......+.. ..|+.+|..|+|||++||+.|
T Consensus 205 ~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~----~~w~~is~~akd~i~~ll~~d 280 (382)
T KOG0032|consen 205 VAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTS----EPWDDISESAKDFIRKLLEFD 280 (382)
T ss_pred cCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCC----CCccccCHHHHHHHHHhcccC
Confidence 8888888888999999999999999998888888876655555544444443333 356778999999999999999
Q ss_pred CCCCCCHHHHhcCCCCCCC
Q psy8260 373 SEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 373 P~~R~ta~e~L~Hp~f~~~ 391 (427)
|.+|+||.|+|+|||++..
T Consensus 281 p~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 281 PRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred cccCCCHHHHhcCccccCC
Confidence 9999999999999999865
No 27
>KOG0580|consensus
Probab=100.00 E-value=8.6e-47 Score=333.25 Aligned_cols=256 Identities=23% Similarity=0.343 Sum_probs=208.6
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH-HHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV-HAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
...++|++++.||+|.||.||. +..++++..||+|++.++..... ...++.||++|-+.|+||||+++|++|++.
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYl-arekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~--- 94 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYL-AREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS--- 94 (281)
T ss_pred cchhhccccccccCCccccEeE-eeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc---
Confidence 3457899999999999999996 56778999999999876533222 235577999999999999999999999865
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
..+|+++||. +|.+...++. .++++..+..|++|++.||.|||.++||||||||+|+|++.++.+||+|||.+
T Consensus 95 ---~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 95 ---KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred ---ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCce
Confidence 5689999988 6788887763 45999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
..... +.+.+.|||..|.+|
T Consensus 172 V~~p~------------------------------------------------------------~kR~tlcgt~dyl~p 191 (281)
T KOG0580|consen 172 VHAPS------------------------------------------------------------NKRKTLCGTLDYLPP 191 (281)
T ss_pred eecCC------------------------------------------------------------CCceeeecccccCCH
Confidence 53211 145567888899999
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
|++.+..++..+|+|++|+..+++..+-+||-.....+..++.....-.. ...++.+|.|||++||.+||.+
T Consensus 192 Emv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~--------p~~is~~a~dlI~~ll~~~p~~ 263 (281)
T KOG0580|consen 192 EMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKF--------PSTISGGAADLISRLLVKNPIE 263 (281)
T ss_pred hhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccC--------CcccChhHHHHHHHHhccCccc
Confidence 99998889999999999999887755555565555444443333222211 1468999999999999999999
Q ss_pred CCCHHHHhcCCCCCCC
Q psy8260 376 RITAEQALAHPYLSQY 391 (427)
Q Consensus 376 R~ta~e~L~Hp~f~~~ 391 (427)
|++..|++.|||+...
T Consensus 264 r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 264 RLALTEVMDHPWIVAN 279 (281)
T ss_pred cccHHHHhhhHHHHhc
Confidence 9999999999999653
No 28
>KOG0610|consensus
Probab=100.00 E-value=3e-45 Score=345.95 Aligned_cols=308 Identities=21% Similarity=0.279 Sum_probs=234.6
Q ss_pred ccccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeec
Q psy8260 57 PYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 135 (427)
+...+.-..|++.+.||.|.-|.||.+. .+.++..+|+|++.+.... .....+...|-+||+.++||.+++||..|++
T Consensus 70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~-l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet 148 (459)
T KOG0610|consen 70 KDGSLGLRHFRLLKRLGCGDIGTVYLVE-LRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET 148 (459)
T ss_pred CCCccCHHHHHHHHHcCCCCceeEEEEE-ecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec
Confidence 3445566678889999999999999755 4557789999999875433 2334566789999999999999999999986
Q ss_pred CccccCCceEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEee
Q psy8260 136 NTCLADFKNVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILD 211 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~D 211 (427)
. ...|++|||| ||+|..+.+++ .|++..++.|+.+|+.||+|||-.|||.||||||||||.++|++.|+|
T Consensus 149 ~------~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsD 222 (459)
T KOG0610|consen 149 D------KYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSD 222 (459)
T ss_pred c------ceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeee
Confidence 5 4678999988 89999988754 599999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccc-------------cccc--ccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccC--
Q psy8260 212 FGLARPTENEMTG-------------YVAT--RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFG-- 274 (427)
Q Consensus 212 FGla~~~~~~~~~-------------~~gt--~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g-- 274 (427)
|-|+.......+. .+-+ +..-.|..+..... -+..|.+
T Consensus 223 FDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~-------------------------~~k~~~~~~ 277 (459)
T KOG0610|consen 223 FDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKK-------------------------RKKKDESAS 277 (459)
T ss_pred ccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccc-------------------------ccccccccc
Confidence 9998654211000 0000 01111111111000 0001111
Q ss_pred ------CCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcc
Q psy8260 275 ------LARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKK 348 (427)
Q Consensus 275 ------~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (427)
.+.+.......++||-.|+|||||.+..++..+|||++|+.+|+|..+..||.......+..+.+...+.++..
T Consensus 278 ~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~ 357 (459)
T KOG0610|consen 278 RSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE 357 (459)
T ss_pred ccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC
Confidence 12233344567999999999999999999999999999999999998888898887777777776555555443
Q ss_pred cHHhhcCCCChhHHHHHHHhcCCCCCCCCC----HHHHhcCCCCCCCCCCCCCCCCCC
Q psy8260 349 DFRQVFKGANPQAIDLLSLMLELDSEKRIT----AEQALAHPYLSQYSDPNDEPTSPP 402 (427)
Q Consensus 349 ~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t----a~e~L~Hp~f~~~~~~~~~~~~~~ 402 (427)
+.++..|+|||+++|++||.+|+. |.|+-+||||..+..+-.....||
T Consensus 358 ------~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP 409 (459)
T KOG0610|consen 358 ------PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPP 409 (459)
T ss_pred ------CcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCC
Confidence 256789999999999999999998 999999999998876644333333
No 29
>KOG0666|consensus
Probab=100.00 E-value=2.6e-46 Score=340.98 Aligned_cols=296 Identities=31% Similarity=0.459 Sum_probs=221.5
Q ss_pred ceeeccccCcccccEEEEeEEeCcCC---cEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSG---VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g---~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
.|++...||+|.+|.||++......+ +.+|||+++.............||+.+++.++||||++|..+|-..
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~----- 99 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH----- 99 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-----
Confidence 35667789999999999875443333 3699999976543333344567999999999999999999988542
Q ss_pred CceEEEEeccCCCCHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC----CCEEEee
Q psy8260 142 FKNVYMVTHLMGADLNNILRT------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED----CELKILD 211 (427)
Q Consensus 142 ~~~~~lv~e~~g~~L~~~l~~------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~----~~~kl~D 211 (427)
...++++++|...||.++++. +.++...++.++.||+.|+.|||++-|+||||||.|||+..+ |.|||+|
T Consensus 100 d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 100 DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence 256899999999999999853 348888999999999999999999999999999999999766 8999999
Q ss_pred CCCCCCCCCC------cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccc
Q psy8260 212 FGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG 285 (427)
Q Consensus 212 FGla~~~~~~------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~ 285 (427)
||+||...+. ....+.|.||+|||+++|..+|+.+. |+|+.||+++|- ++.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~Ai------DvWAiGCIfaEl-----------------Ltl 236 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAI------DVWAIGCIFAEL-----------------LTL 236 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchh------hhHHHHHHHHHH-----------------Hcc
Confidence 9999977653 34467899999999999999999988 999999999882 111
Q ss_pred ccccccccchHH-hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcH-----HHHHHHhc-CCCCCcccHHhhcCCCC
Q psy8260 286 YVATRWYRAPEI-MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSD-----SARKYINS-LPLLTKKDFRQVFKGAN 358 (427)
Q Consensus 286 ~~gt~~Y~APEv-l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~s 358 (427)
. |.|-.-|. +.... .-...++-.|+.+||+|...-|...... ....+... .....-..+.......+
T Consensus 237 ~---PlF~g~E~k~~~~~---Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~ 310 (438)
T KOG0666|consen 237 E---PLFKGREEKIKTKN---PFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKD 310 (438)
T ss_pred C---ccccchhhhcccCC---CchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCC
Confidence 1 11111111 11111 2245789999999999998766543221 01111100 00111122334455678
Q ss_pred hhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q psy8260 359 PQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 359 ~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
+.+.|||.+||++||.||+|++|+|+|+||.+-.-|
T Consensus 311 ~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 311 PSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred chHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 889999999999999999999999999999875444
No 30
>KOG0198|consensus
Probab=100.00 E-value=3.7e-45 Score=347.05 Aligned_cols=260 Identities=27% Similarity=0.394 Sum_probs=196.4
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..+..++.||+|+||.||.+ .+..+|...|||.+..... ...+.+.+|+++|++++|||||+.++...... . .
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~-~~~~~g~~~AvK~v~~~~~--~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~---~-~ 89 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLA-TNKKTGELMAVKSVELEDS--PTSESLEREIRILSRLNHPNIVQYYGSSSSRE---N-D 89 (313)
T ss_pred chhhhhccccCccceEEEEE-EecCCCcceeeeeeecccc--hhHHHHHHHHHHHHhCCCCCEEeeCCcccccc---C-e
Confidence 34677899999999999964 4556799999999876421 22566789999999999999999998643221 1 3
Q ss_pred eEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-CCCEEEeeCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFGLARPTE 219 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-~~~~kl~DFGla~~~~ 219 (427)
.++++|||+ +|+|.+++... ++++..++.+.+||++||.|||++|||||||||+|||++. ++.+||+|||+++...
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 578889988 88999998764 5999999999999999999999999999999999999999 7999999999987543
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..... | .......||+.|||||++.
T Consensus 170 ~~~~~-------------------------------~------------------------~~~~~~~Gtp~~maPEvi~ 194 (313)
T KOG0198|consen 170 SKGTK-------------------------------S------------------------DSELSVQGTPNYMAPEVIR 194 (313)
T ss_pred ccccc-------------------------------c------------------------cccccccCCccccCchhhc
Confidence 20000 0 0112345777888888877
Q ss_pred hc-cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHH-HHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 300 NW-MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSA-RKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 300 ~~-~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
+. .....+|+||+||++-+|.++..||......... ....... ..+.+...++++++|||.+||++||.+||
T Consensus 195 ~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~------~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rp 268 (313)
T KOG0198|consen 195 NGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED------SLPEIPDSLSDEAKDFLRKCFKRDPEKRP 268 (313)
T ss_pred CCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC------CCCCCCcccCHHHHHHHHHHhhcCcccCc
Confidence 42 2223779999999988888876666543111111 1111111 11134456899999999999999999999
Q ss_pred CHHHHhcCCCCCCC
Q psy8260 378 TAEQALAHPYLSQY 391 (427)
Q Consensus 378 ta~e~L~Hp~f~~~ 391 (427)
||+++|+|||..+.
T Consensus 269 ta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 269 TAEELLEHPFLKQN 282 (313)
T ss_pred CHHHHhhChhhhcc
Confidence 99999999999764
No 31
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.6e-44 Score=355.46 Aligned_cols=301 Identities=41% Similarity=0.702 Sum_probs=216.5
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.++|.+.+.||+|+||.||. +.+..+++.||||++............+.+|+.+++.++||||+++++++.........
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCA-AYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEE-EEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 35688899999999999985 56777899999999976555555566778999999999999999999998765554455
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
..+|++|++++++|...+. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 102 ~~~~lv~e~~~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 180 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 180 (364)
T ss_pred CeEEEEEeCCCCCHHHHHH-hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC
Confidence 6789999999888888775 358899999999999999999999999999999999999999999999999987543211
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. .....||+.|+|||++.+..
T Consensus 181 ~-----------------------------------------------------------~~~~~~t~~y~aPE~~~~~~ 201 (364)
T cd07875 181 M-----------------------------------------------------------MTPYVVTRYYRAPEVILGMG 201 (364)
T ss_pred c-----------------------------------------------------------ccCCcccCCcCCHHHHhCCC
Confidence 0 01123455566666665555
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHH-----------------------hhcCcHHHHHHHhcCCCCCcccHHhhc-----
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFM-----------------------AKISSDSARKYINSLPLLTKKDFRQVF----- 354 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 354 (427)
+..++|+||+|++++.|.++..+|. ..... ....+....+......+.+.+
T Consensus 202 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (364)
T cd07875 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKLFPDVLF 280 (364)
T ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhH-HHHHHHhhCCCcCCCChHhhCccccc
Confidence 5556677777777766644433332 11110 111122222222221122111
Q ss_pred -------CCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCC-C-CcccccCCCCHHHHHHHHhhhc
Q psy8260 355 -------KGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTSPP-Y-DQSFEDMDLPVDQWKGTYSLES 425 (427)
Q Consensus 355 -------~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
...+.+++|||.+||++||.+|||++|+|+||||..+..|...+..++ . +....+...+.+.|+..+..+.
T Consensus 281 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (364)
T cd07875 281 PADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360 (364)
T ss_pred cccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcccCCCCCCCCCCccchhhhccHHHHHHHHHHHH
Confidence 123568999999999999999999999999999998777655543332 2 2223445677888888776665
No 32
>KOG0578|consensus
Probab=100.00 E-value=2.8e-45 Score=358.76 Aligned_cols=255 Identities=22% Similarity=0.378 Sum_probs=205.5
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|..-..+|+|+-|.||. +....+++.||||++....+.. .+-+++|+.+|+..+|+|||.+++.|-.. .
T Consensus 273 ~~y~~~~kigqgaSG~vy~-A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~------d 343 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYV-ARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVG------D 343 (550)
T ss_pred hhhcchhhhccccccceee-eeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhccc------c
Confidence 4466667899999999994 6778899999999997654432 34477999999999999999999887543 5
Q ss_pred eEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 144 NVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
.+++||||+ ||+|.+++....++|.++..++++++.||+|||.+||||||||.+|||++.+|.+||+|||++.......
T Consensus 344 eLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 344 ELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred eeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 689999998 7899999998899999999999999999999999999999999999999999999999999987543321
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. .+.+.+|||+||||||+....
T Consensus 424 ~----------------------------------------------------------KR~TmVGTPYWMAPEVvtrk~ 445 (550)
T KOG0578|consen 424 S----------------------------------------------------------KRSTMVGTPYWMAPEVVTRKP 445 (550)
T ss_pred C----------------------------------------------------------ccccccCCCCccchhhhhhcc
Confidence 1 234567999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
|+.++||||||+++-+|--+-+||..+..-...+.. ..+..... +....+|++++|||.+||+.||.+|+||.|+
T Consensus 446 YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI-a~ng~P~l----k~~~klS~~~kdFL~~cL~~dv~~RasA~eL 520 (550)
T KOG0578|consen 446 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-ATNGTPKL----KNPEKLSPELKDFLDRCLVVDVEQRASAKEL 520 (550)
T ss_pred cCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH-hhcCCCCc----CCccccCHHHHHHHHHHhhcchhcCCCHHHH
Confidence 999999999999998885555555543222222211 12211111 1235689999999999999999999999999
Q ss_pred hcCCCCCC
Q psy8260 383 LAHPYLSQ 390 (427)
Q Consensus 383 L~Hp~f~~ 390 (427)
|+||||..
T Consensus 521 L~HpFl~~ 528 (550)
T KOG0578|consen 521 LEHPFLKM 528 (550)
T ss_pred hcChhhhh
Confidence 99999943
No 33
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.1e-44 Score=352.71 Aligned_cols=296 Identities=42% Similarity=0.738 Sum_probs=210.3
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.+.|.+.+.||+|+||.||. +.+..+|+.||||++............+.+|+.+++.++||||++++++|.........
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~-~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCA-AFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEE-EEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 35688899999999999996 56778899999999976555555566778999999999999999999998765444445
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC-
Q psy8260 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE- 221 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~- 221 (427)
..+|+++++++++|.+.+. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~~~lv~e~~~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 177 (359)
T cd07876 99 QDVYLVMELMDANLCQVIH-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF 177 (359)
T ss_pred ceeEEEEeCCCcCHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCc
Confidence 5689999999888877764 35889999999999999999999999999999999999999999999999998643221
Q ss_pred -cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 222 -MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 222 -~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.+.. .||+.|+|||++.+
T Consensus 178 ~~~~~-------------------------------------------------------------~~t~~y~aPE~~~~ 196 (359)
T cd07876 178 MMTPY-------------------------------------------------------------VVTRYYRAPEVILG 196 (359)
T ss_pred cCCCC-------------------------------------------------------------cccCCCCCchhccC
Confidence 1122 34555555555555
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHH-----------------------hhcCcHHHHHHHhcCCCCCcccHHhhc---
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFM-----------------------AKISSDSARKYINSLPLLTKKDFRQVF--- 354 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 354 (427)
..+..++|+||+|++++.|.++..+|. .... .....+....+......+.+.+
T Consensus 197 ~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (359)
T cd07876 197 MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQ-PTVRNYVENRPQYPGISFEELFPDW 275 (359)
T ss_pred CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhhCCCCCCcchhhhcccc
Confidence 555556677777776666644433332 1111 0111222222222222222211
Q ss_pred ---------CCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCC--CCcccccCCCCHHHHHHHHh
Q psy8260 355 ---------KGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTSPP--YDQSFEDMDLPVDQWKGTYS 422 (427)
Q Consensus 355 ---------~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 422 (427)
...+++++|||.+||++||++|+|++|+|+||||..+..|......++ .+...++.+...++|...+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T cd07876 276 IFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWKELIY 354 (359)
T ss_pred ccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCcccccCCCccccccccccccccHHHHHHHHH
Confidence 224678999999999999999999999999999998777654433222 22233455555566665443
No 34
>KOG0585|consensus
Probab=100.00 E-value=5.9e-45 Score=348.56 Aligned_cols=265 Identities=24% Similarity=0.350 Sum_probs=199.5
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-------H-----HHHHHHHHHHHHhcCCCCCceeee
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-------V-----HAKRTYRELRMLKHMNHENVIGLL 130 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-------~-----~~~~~~~Ei~~l~~l~HpnIv~l~ 130 (427)
.+.|.+.+.||+|+||.|.. +++..+++.||||++.+..... . ..++..+||.+|+++.|||||+|+
T Consensus 96 lNqy~l~~eiG~G~yGkVkL-ar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKL-ARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred hhheehhhhhcCCccceEEE-EeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 46789999999999998884 7788899999999987542211 1 124788999999999999999999
Q ss_pred eeeecCccccCCceEEEEeccC-CCCHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEE
Q psy8260 131 DVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 208 (427)
Q Consensus 131 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~~-l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~k 208 (427)
++..+. ....+|||+||| .|.+...-.... +++.+++.|+++++.||+|||.+|||||||||+|+||+.+|.||
T Consensus 175 EvLDDP----~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 175 EVLDDP----ESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EeecCc----ccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 997653 346799999999 444443322344 89999999999999999999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccc
Q psy8260 209 ILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA 288 (427)
Q Consensus 209 l~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~g 288 (427)
|+|||.+......... .....+...+|
T Consensus 251 IsDFGVs~~~~~~~~~-----------------------------------------------------~~d~~L~~tvG 277 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDE-----------------------------------------------------GSDDQLSRTVG 277 (576)
T ss_pred eeccceeeecccCCcc-----------------------------------------------------ccHHHHhhcCC
Confidence 9999988643211000 00001223456
Q ss_pred cccccchHHhhhcc---C-CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHH
Q psy8260 289 TRWYRAPEIMLNWM---H-YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDL 364 (427)
Q Consensus 289 t~~Y~APEvl~~~~---~-~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 364 (427)
||.|+|||...... + ...-|+|++|+.+|-|..+..||.+...-....++.+..-.++. .+.++++++||
T Consensus 278 TPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~------~pe~~e~~kDl 351 (576)
T KOG0585|consen 278 TPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPE------NPEINEDLKDL 351 (576)
T ss_pred CccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCC------cccccHHHHHH
Confidence 66666666554311 1 22349999999999998888888876655555555443222221 12468899999
Q ss_pred HHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 365 LSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 365 i~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
|.+||++||.+|+|+.++..|||....
T Consensus 352 i~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 352 IKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHhhcChhheeehhhheecceeccC
Confidence 999999999999999999999999864
No 35
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.2e-43 Score=347.46 Aligned_cols=298 Identities=37% Similarity=0.635 Sum_probs=205.2
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
+|.+.+.||+|+||.||. +.+..+|+.||||++...........++.+|+++++.++||||+++++++.... ......
T Consensus 1 ry~i~~~lg~G~~g~V~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCS-AIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-RREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEE-EEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccC-CCCCce
Confidence 367889999999999996 557788999999998754333344556789999999999999999999875432 122346
Q ss_pred EEEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 145 VYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
+|+++|+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 158 (338)
T cd07859 79 IYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 158 (338)
T ss_pred EEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence 899999999999888764 4699999999999999999999999999999999999999999999999999875422110
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh--c
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN--W 301 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~--~ 301 (427)
... ......||+.|+|||++.+ .
T Consensus 159 ~~~-------------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~ 183 (338)
T cd07859 159 TAI-------------------------------------------------------FWTDYVATRWYRAPELCGSFFS 183 (338)
T ss_pred ccc-------------------------------------------------------cccCCCCCCCcCCHHHHhcccc
Confidence 000 0011234445555554433 2
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHH-----------------------HhhcCcHHHHHHHhcCCCCCcccHHhhcCCCC
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEF-----------------------MAKISSDSARKYINSLPLLTKKDFRQVFKGAN 358 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 358 (427)
.+..++|+||+|++++.+.++..+| ...........+...........+...++..+
T Consensus 184 ~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (338)
T cd07859 184 KYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNAD 263 (338)
T ss_pred ccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCC
Confidence 3444567777777666654443333 22211111112222222222233445556788
Q ss_pred hhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCC---CCcccccCCCCHHHHHH
Q psy8260 359 PQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTSPP---YDQSFEDMDLPVDQWKG 419 (427)
Q Consensus 359 ~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 419 (427)
+++.+||.+||+.||++|||++|+|+||||.........+...+ ....++....+.+....
T Consensus 264 ~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (338)
T cd07859 264 PLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSAQPITKLEFEFERRRLTKEDVRE 327 (338)
T ss_pred hHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccccccccCccccccccHHHHhcCHHHHHH
Confidence 99999999999999999999999999999987665444333322 23334444444444443
No 36
>KOG4717|consensus
Probab=100.00 E-value=1.4e-44 Score=348.07 Aligned_cols=258 Identities=26% Similarity=0.395 Sum_probs=210.6
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.|-|++.+.||.|.|. |++.+.+..||.+||||++.+...+......+++|+++|+.++|||||+||++..+.
T Consensus 17 AGLYDLekTlG~GHFA-VVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ------ 89 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFA-VVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ------ 89 (864)
T ss_pred eeeehhhhhhcCCcee-hhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc------
Confidence 4678999999999986 445677888999999999998887777778899999999999999999999998654
Q ss_pred ceEEEEeccC-CCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc-CCCCEEEeeCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELKILDFGLARPT 218 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~-~~~~~kl~DFGla~~~ 218 (427)
..+|++.|+- +|+|++++- ..+++|+.++.|+.||+.|+.|||+..+|||||||+||.+- .-|-|||.|||++-.+
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC
Confidence 4689999998 679999773 46799999999999999999999999999999999999864 5689999999998644
Q ss_pred C--CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 219 E--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 219 ~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
. ...++.||+..|-|||+++|
T Consensus 170 ~PG~kL~TsCGSLAYSAPEILLG--------------------------------------------------------- 192 (864)
T KOG4717|consen 170 QPGKKLTTSCGSLAYSAPEILLG--------------------------------------------------------- 192 (864)
T ss_pred CCcchhhcccchhhccCchhhhc---------------------------------------------------------
Confidence 3 34566677777777777665
Q ss_pred HhhhccCCC-CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 297 IMLNWMHYN-QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 297 vl~~~~~~~-~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
..|.. .+||||||+|+|+|-.+..||...+.++....+....- .+...+|.+++|||..||+.||+|
T Consensus 193 ----DsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY--------tvPshvS~eCrdLI~sMLvRdPkk 260 (864)
T KOG4717|consen 193 ----DSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY--------TVPSHVSKECRDLIQSMLVRDPKK 260 (864)
T ss_pred ----CccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc--------cCchhhhHHHHHHHHHHHhcCchh
Confidence 22333 35999999999999877777877776666554433211 123457899999999999999999
Q ss_pred CCCHHHHhcCCCCCCCCCCCC
Q psy8260 376 RITAEQALAHPYLSQYSDPND 396 (427)
Q Consensus 376 R~ta~e~L~Hp~f~~~~~~~~ 396 (427)
|.|.+|+..|+|++....+..
T Consensus 261 RAslEeI~s~~Wlq~~D~~~s 281 (864)
T KOG4717|consen 261 RASLEEIVSTSWLQAGDRGLS 281 (864)
T ss_pred hccHHHHhccccccCCCCCcc
Confidence 999999999999987654433
No 37
>KOG0591|consensus
Probab=100.00 E-value=3.2e-46 Score=336.36 Aligned_cols=254 Identities=23% Similarity=0.334 Sum_probs=202.4
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|.|.+.||+|+||.||+ +.+..+|..||.|.+.-...+....+.+..|+.+|++|+|||||+++++-.. ++.
T Consensus 18 l~~y~Il~~IG~GsFg~vyk-v~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~----~~~ 92 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYK-VQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI----EDN 92 (375)
T ss_pred HHHHHHHHHHcCCcchheEE-eeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh----ccc
Confidence 45688999999999999995 5678899999999998666677777888999999999999999999874211 222
Q ss_pred ceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHh--cC--ceeccCCCCCeEEcCCCCEEEeeC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHS--AG--IIHRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~--~~--iiHrDLKp~NILl~~~~~~kl~DF 212 (427)
..++++||+| +|||.++++. +.++|..+..++.|+++||..||+ .. |+||||||.||+|+.+|.|||+||
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence 4478999999 6899998853 469999999999999999999999 45 999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
||++.+.+..+ ...+.+|||+|
T Consensus 173 GL~r~l~s~~t----------------------------------------------------------fA~S~VGTPyY 194 (375)
T KOG0591|consen 173 GLGRFLSSKTT----------------------------------------------------------FAHSLVGTPYY 194 (375)
T ss_pred hhHhHhcchhH----------------------------------------------------------HHHhhcCCCcc
Confidence 99997655432 12356788888
Q ss_pred cchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhc-CCCChhHHHHHHHhcCC
Q psy8260 293 RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF-KGANPQAIDLLSLMLEL 371 (427)
Q Consensus 293 ~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~dLi~~mL~~ 371 (427)
|+||++....|..++|+||+||++++|.....||...+--..-+++.+. +++..+ ..+|.+...||.-|+..
T Consensus 195 MSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-------d~~~~p~~~YS~~l~~li~~ci~v 267 (375)
T KOG0591|consen 195 MSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-------DYPPLPDEHYSTDLRELINMCIAV 267 (375)
T ss_pred cCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-------CCCCCcHHHhhhHHHHHHHHHccC
Confidence 8888888888999999999999999997777777654322222222211 111122 34688999999999999
Q ss_pred CCCCCCCHHHHhcCCCCCCC
Q psy8260 372 DSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 372 dP~~R~ta~e~L~Hp~f~~~ 391 (427)
||..||+. ||++.+.
T Consensus 268 d~~~RP~t-----~~~v~di 282 (375)
T KOG0591|consen 268 DPEQRPDT-----VPYVQDI 282 (375)
T ss_pred CcccCCCc-----chHHHHH
Confidence 99999985 5665543
No 38
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.4e-43 Score=350.04 Aligned_cols=300 Identities=40% Similarity=0.678 Sum_probs=211.4
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.++|.+.+.||+|+||.||. +.+..+++.||||++..............+|+.+++.++||||++++++|.........
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCA-AYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhceeEEEEeeecCCEEEEE-EEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 35688899999999999995 56777899999999976655555667788999999999999999999998765544445
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
..+|++++++++++.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~~lv~e~~~~~l~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 173 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 173 (355)
T ss_pred ceeEEEhhhhcccHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc
Confidence 67899999998888877653 58899999999999999999999999999999999999999999999999987532211
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. .....||+.|+|||++.+..
T Consensus 174 ~-----------------------------------------------------------~~~~~~t~~y~aPE~~~~~~ 194 (355)
T cd07874 174 M-----------------------------------------------------------MTPYVVTRYYRAPEVILGMG 194 (355)
T ss_pred c-----------------------------------------------------------cCCccccCCccCHHHHcCCC
Confidence 0 01123556666666665555
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHH-----------------------hhcCcHHHHHHHhcCCCCCcccHHh-------
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFM-----------------------AKISSDSARKYINSLPLLTKKDFRQ------- 352 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~------- 352 (427)
+..++|+||+|++++.|.++..+|. .... .....+....+......+..
T Consensus 195 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (355)
T cd07874 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLF 273 (355)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhc-HHHHHHHhcCCccccccchhhcccccc
Confidence 6666788888877766644433332 1111 11111222112111111111
Q ss_pred -----hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC-C-CCCcccccCCCCHHHHHHHHhhh
Q psy8260 353 -----VFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTS-P-PYDQSFEDMDLPVDQWKGTYSLE 424 (427)
Q Consensus 353 -----~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 424 (427)
.....+.+++|||.+||+.||++|||++|+|+||||..+..+.....+ + .+.....+.....+.|+..+-.+
T Consensus 274 ~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (355)
T cd07874 274 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 352 (355)
T ss_pred ccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccChhhccCCCccccccchhhhhccHHHHHHHHHHH
Confidence 112245688999999999999999999999999999877655333222 1 12223334445566677665443
No 39
>KOG0694|consensus
Probab=100.00 E-value=2e-44 Score=359.25 Aligned_cols=261 Identities=20% Similarity=0.325 Sum_probs=212.0
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNT 137 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~ 137 (427)
.+....|.+.++||+|+||.|+++. .+.+++.+|||++++...- ....+....|.+|+... +||.+++|+..|++.
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae-~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~- 441 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAE-LKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK- 441 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEE-EcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC-
Confidence 3455678999999999999999755 4568889999999876432 33456677888888776 599999999999875
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
.++|+||||. |||+..+.+.+.|++..++.|+..|+.||+|||++|||+||||.+|||+|.+|.+||+|||+++
T Consensus 442 -----~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 442 -----EHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred -----CeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccccc
Confidence 5789999988 7887777777899999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
..... .....++||||.|||||
T Consensus 517 e~m~~----------------------------------------------------------g~~TsTfCGTpey~aPE 538 (694)
T KOG0694|consen 517 EGMGQ----------------------------------------------------------GDRTSTFCGTPEFLAPE 538 (694)
T ss_pred ccCCC----------------------------------------------------------CCccccccCChhhcChh
Confidence 42110 01334678999999999
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
|+.+..|...+|||+||+++|+|..+-.||......+....+++..+.++ ...|.++.+++++||.+||.+|
T Consensus 539 il~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP--------~~ls~ea~~il~~ll~k~p~kR 610 (694)
T KOG0694|consen 539 VLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYP--------RFLSKEAIAIMRRLLRKNPEKR 610 (694)
T ss_pred hhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC--------CcccHHHHHHHHHHhccCcccc
Confidence 99988899999999999999999777777765443333333433333332 3578999999999999999999
Q ss_pred CC-----HHHHhcCCCCCCCCC
Q psy8260 377 IT-----AEQALAHPYLSQYSD 393 (427)
Q Consensus 377 ~t-----a~e~L~Hp~f~~~~~ 393 (427)
+. ++++.+||||+.+..
T Consensus 611 LG~~e~d~~~i~~hpFFr~i~w 632 (694)
T KOG0694|consen 611 LGSGERDAEDIKKHPFFRSIDW 632 (694)
T ss_pred cCCCCCCchhhhhCCccccCCH
Confidence 96 588999999997643
No 40
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2e-43 Score=338.82 Aligned_cols=256 Identities=29% Similarity=0.472 Sum_probs=183.8
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.|.+.+.||.|+||.||+ +.+..+++.||+|++..... ........+|+++++.++||||+++++++... .
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~-~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 76 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFK-GRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTE------R 76 (288)
T ss_pred ccceEeeEEecCCCEEEEE-EEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC------C
Confidence 4578889999999999996 45677899999999864322 12234567899999999999999999998654 3
Q ss_pred eEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..++++|++.++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 77 CLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred eEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 5789999998899888754 34789999999999999999999999999999999999999999999999998643221
Q ss_pred ---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 222 ---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 222 ---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
.....+ |+.|+|||++
T Consensus 157 ~~~~~~~~~-------------------------------------------------------------~~~y~aPE~~ 175 (288)
T cd07871 157 TKTYSNEVV-------------------------------------------------------------TLWYRPPDVL 175 (288)
T ss_pred CccccCcee-------------------------------------------------------------cccccChHHh
Confidence 112234 4445555544
Q ss_pred hh-ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh----------------------cCCCCCcccHHhhcC
Q psy8260 299 LN-WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN----------------------SLPLLTKKDFRQVFK 355 (427)
Q Consensus 299 ~~-~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~ 355 (427)
.+ ..+..++|+||+|++++.+.++..+|......+....... ..+......+.....
T Consensus 176 ~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (288)
T cd07871 176 LGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAP 255 (288)
T ss_pred cCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCC
Confidence 33 2234445777777666665444333322111111100000 011111122223345
Q ss_pred CCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 356 GANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 356 ~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
..+++++|||++||++||.+|+|++|+|+||||
T Consensus 256 ~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 256 RLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 678999999999999999999999999999998
No 41
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.6e-42 Score=341.04 Aligned_cols=303 Identities=54% Similarity=0.919 Sum_probs=232.9
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.++|.+.+.||+|+||.||. +.+..+|..||||++............+.+|+.+|+.++||||++++++|.........
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~-~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCS-ALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEE-EEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 35688999999999999996 45677899999999865444444455678999999999999999999998755433333
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
..+++++++++++|..++....+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 93 ~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 172 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEM 172 (343)
T ss_pred ceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCc
Confidence 45789999999999998887889999999999999999999999999999999999999999999999999987655444
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
....+++.|+|||.+.+.. .
T Consensus 173 ~~~~~~~~y~aPE~~~~~~------------------------------------------------------------~ 192 (343)
T cd07880 173 TGYVVTRWYRAPEVILNWM------------------------------------------------------------H 192 (343)
T ss_pred cccccCCcccCHHHHhCCC------------------------------------------------------------C
Confidence 4445566666666653211 1
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHH-----------------------HhhcCcHHHHHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEF-----------------------MAKISSDSARKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
+..++|+|++|++++.+.++..+| ...........+....+......+....+..++
T Consensus 193 ~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (343)
T cd07880 193 YTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANP 272 (343)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCCh
Confidence 223446666666665543333222 222222222233333333333444555667889
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCCCcccccCCCCHHHHHHHHhhhcc
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKGTYSLESL 426 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (427)
++.+||.+||+.||++|+|+.++++||||+....+..++..+++..++++.+...++|++....|-|
T Consensus 273 ~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
T cd07880 273 LAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDETEAPPYDDSFDEVDQSLEEWKRLTFTEIL 339 (343)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcccccCCCCccccHHhhccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888877888888999999999999999998877653
No 42
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.3e-42 Score=341.61 Aligned_cols=322 Identities=66% Similarity=1.054 Sum_probs=237.5
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.|.+...||.|+||.||.+ .+..+++.||||++..............+|+.+++.++||||+++++++..........
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSA-FDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred CceEEEEEeccCCceEEEEE-EECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 45888899999999999964 55668899999998754444445566789999999999999999998876543323334
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 144 NVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
.+|+++++++++|.+++....+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 94 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (343)
T cd07851 94 DVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMT 173 (343)
T ss_pred cEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccccc
Confidence 58999999999999999888899999999999999999999999999999999999999999999999999986655445
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
...++..|+|||++.+...++. ..|+|+.|+++.+ +.+|.. .
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~------~~DvwslGv~l~e-----------------lltg~~---------------p 215 (343)
T cd07851 174 GYVATRWYRAPEIMLNWMHYNQ------TVDIWSVGCIMAE-----------------LLTGKT---------------L 215 (343)
T ss_pred CCcccccccCHHHHhCCCCCCc------hHhHHHHHHHHHH-----------------HHhCCC---------------C
Confidence 5566667777776643221111 1244444443332 111100 1
Q ss_pred CCC-CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 304 YNQ-TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 304 ~~~-~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
+.. .....+..++..++.++..+...........+....+......+...+...++++.|||.+||+.||.+|||+.|+
T Consensus 216 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~el 295 (343)
T cd07851 216 FPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEA 295 (343)
T ss_pred CCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHH
Confidence 111 1112222333333444444433333333333433344444445556666789999999999999999999999999
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCcccccCCCCHHHHHHHHhhh
Q psy8260 383 LAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKGTYSLE 424 (427)
Q Consensus 383 L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (427)
++||||.++..+..++..+.++.++++..+.+.+|++.++++
T Consensus 296 l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (343)
T cd07851 296 LAHPYLAEYHDPEDEPVAPPYDQSFESRDLTVDEWKELVYKE 337 (343)
T ss_pred hcCCCccccCCCcccccccccCcchhhhhcCHHHHHHHhHHH
Confidence 999999999888888888999999999999999999998876
No 43
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.6e-42 Score=343.26 Aligned_cols=315 Identities=41% Similarity=0.661 Sum_probs=219.2
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++.+.||+|+||.||. +.+..+|+.||||++..........+++.+|+++++.++||||+++++++..... .....+
T Consensus 2 ~~~~~~lg~G~~g~V~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 79 (372)
T cd07853 2 VEPDRPIGYGAFGVVWS-VTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHI-DPFEEI 79 (372)
T ss_pred CcccceeeeCCCEEEEE-EEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCc-cccceE
Confidence 56788999999999996 4567789999999987654444555678899999999999999999999865431 122368
Q ss_pred EEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC---
Q psy8260 146 YMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE--- 221 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~--- 221 (427)
|+++++++++|...+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 80 YVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred EEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 99999998888887754 56999999999999999999999999999999999999999999999999999754321
Q ss_pred -cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 222 -MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 222 -~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.+...+|+.|+|||++.+...++.. .|+|+.||++.+ +.+|..
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~------~DiwslG~il~e-----------------l~~g~~------------- 203 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSA------VDIWSVGCIFAE-----------------LLGRRI------------- 203 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcH------HHHHhHHHHHHH-----------------HHcCCC-------------
Confidence 2334567777777777654333322 266666666544 222211
Q ss_pred ccCCC-CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHH---hhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 301 WMHYN-QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFR---QVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 301 ~~~~~-~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
.+. .....++..|...+|.++.+....... ...+.....+.... ... ......++++.|||.+||++||.+|
T Consensus 204 --pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 279 (372)
T cd07853 204 --LFQAQSPIQQLDLITDLLGTPSLEAMRSACE-GARAHILRGPHKPP-SLPVLYTLSSQATHEAVHLLCRMLVFDPDKR 279 (372)
T ss_pred --CCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH-HHHHHHHhCCCCCC-chHHhcccCCCCCHHHHHHHHHhCCCChhhC
Confidence 222 223445555666666665543322211 12222222211111 111 1234568899999999999999999
Q ss_pred CCHHHHhcCCCCCCCCC--------------------CCCCC-CCCCCCcccccCCCCHHHHHHHHh
Q psy8260 377 ITAEQALAHPYLSQYSD--------------------PNDEP-TSPPYDQSFEDMDLPVDQWKGTYS 422 (427)
Q Consensus 377 ~ta~e~L~Hp~f~~~~~--------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 422 (427)
+|++|+|+||||.+... ...+| ...+++.+.++...++.+++..+.
T Consensus 280 ~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (372)
T cd07853 280 ISAADALAHPYLDEGRLRYHTCMCKCCYTTSGGRVYTSDFEPSANPPFDDEYEKNLTSVRQVKEELH 346 (372)
T ss_pred cCHHHHhcCHhhCCCcchhccccccccccccccccCCcccCCCCCCCCCcccccccCCHHHHHHHHH
Confidence 99999999999987321 01111 234566667776777777776544
No 44
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.3e-42 Score=338.25 Aligned_cols=302 Identities=65% Similarity=1.026 Sum_probs=229.5
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
..+|.+.+.||+|+||.||. +.+..+|+.||+|++..........+.+.+|+.++++++||||+++++++.........
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCA-AFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEE-EEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 35688889999999999996 45667899999999876544444456677999999999999999999998655444444
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
..+|+++++++++|.++++...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 174 (345)
T cd07877 95 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 174 (345)
T ss_pred ccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccccc
Confidence 56889999999999998887789999999999999999999999999999999999999999999999999987655444
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
....+|.+|+|||++.+...
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~------------------------------------------------------------ 194 (345)
T cd07877 175 TGYVATRWYRAPEIMLNWMH------------------------------------------------------------ 194 (345)
T ss_pred cccccCCCccCHHHHhCccC------------------------------------------------------------
Confidence 44556666666666543211
Q ss_pred CCCCCCHHHHHHHHHHh-----------------------CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 303 HYNQTDIHQLNLIMEML-----------------------GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~l-----------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
+..++|+||+|++++.+ +.++..............+....+..+...+...+...++
T Consensus 195 ~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (345)
T cd07877 195 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP 274 (345)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCH
Confidence 22344666666555444 2222222222222222223333333333334444456789
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCCCcccccCCCCHHHHHHHHhhhc
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKGTYSLES 425 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
+++|||.+||+.||.+|+|+.++++||||.++..|...+.++.++.++...+.-.+.|.+-...++
T Consensus 275 ~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (345)
T cd07877 275 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEV 340 (345)
T ss_pred HHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCccccCCCccCcchhcccCHHHHHHHHHHHH
Confidence 999999999999999999999999999999998898888888899888777777788887766654
No 45
>KOG0669|consensus
Probab=100.00 E-value=5.5e-45 Score=323.73 Aligned_cols=293 Identities=29% Similarity=0.449 Sum_probs=227.8
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc--ccC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC--LAD 141 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~ 141 (427)
+.++-...+|+|.||.||+ +....+|++||+|++.............+||+.+|..++|+|++.++++...... ..+
T Consensus 17 ~~yek~~kigqGtfgeVFk-Ar~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFK-ARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHH-HhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 4556667899999999995 6677899999998765433333334557899999999999999999988654321 123
Q ss_pred CceEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...+|+|+.+|..||..++.. .+++..+++.++.+++.||.|+|++.|+|||+||+|+||+.+|.+||+|||++|.+.
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 456899999999999999965 469999999999999999999999999999999999999999999999999998654
Q ss_pred C-------CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 220 N-------EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 220 ~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
. ..+..+.|.||++||.++|.+.|++.. |+|.+||+.++ +.++.+
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~i------DiWgAgCimae-----------------Mwtrsp----- 227 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPI------DIWGAGCIMAE-----------------MWTRSP----- 227 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcc------hhHhHHHHHHH-----------------HHccCc-----
Confidence 2 345667899999999999999999887 99999999877 332222
Q ss_pred cchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCC--CCCcccHHhhcC--CCChhHHHHHHHh
Q psy8260 293 RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP--LLTKKDFRQVFK--GANPQAIDLLSLM 368 (427)
Q Consensus 293 ~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~s~~~~dLi~~m 368 (427)
.....++..+|..|-.++|.-..+.|.....-....-+..-| ..+.+..+...+ ..+++|.||+.+|
T Consensus 228 ---------imqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~l 298 (376)
T KOG0669|consen 228 ---------IMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKL 298 (376)
T ss_pred ---------cccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHH
Confidence 122345778899999999998888887765433333222122 112222222222 2378999999999
Q ss_pred cCCCCCCCCCHHHHhcCCCCCCCCCC
Q psy8260 369 LELDSEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 369 L~~dP~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
|.+||.||++++|+|+|.||-.-+.|
T Consensus 299 l~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 299 LKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred hccCcccCcchHhhhchhhhhcCCcc
Confidence 99999999999999999999764444
No 46
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-42 Score=347.26 Aligned_cols=261 Identities=23% Similarity=0.285 Sum_probs=188.3
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
+..+.|.+.+.||+|+||.||. +.+..+++.||||.... ....+|+++|++++|||||+++++|...
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~-~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~---- 155 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFA-CIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYN---- 155 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEE-EEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEEC----
Confidence 4456799999999999999995 67888999999996532 2357899999999999999999998653
Q ss_pred CCceEEEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 141 DFKNVYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 141 ~~~~~~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...++++++++++|...+.. ..+++..+..++.||+.||.|||++|||||||||+|||++.++.+||+|||+|+...
T Consensus 156 --~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~ 233 (391)
T PHA03212 156 --KFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPV 233 (391)
T ss_pred --CeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccc
Confidence 45788899888888877654 568999999999999999999999999999999999999999999999999986421
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... ....+.+||+.|+|||++.
T Consensus 234 ~~~~---------------------------------------------------------~~~~~~~gt~~y~aPE~~~ 256 (391)
T PHA03212 234 DINA---------------------------------------------------------NKYYGWAGTIATNAPELLA 256 (391)
T ss_pred cccc---------------------------------------------------------cccccccCccCCCChhhhc
Confidence 1100 0111234666666666666
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcC------c-HHHHHHHh--------------------------cCC-CC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKIS------S-DSARKYIN--------------------------SLP-LL 345 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~------~-~~~~~~~~--------------------------~~~-~~ 345 (427)
+..+..++|+||+|++++.+.++..++..... . ........ ... ..
T Consensus 257 ~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (391)
T PHA03212 257 RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKP 336 (391)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCC
Confidence 65566667888888777666443322211100 0 00000000 000 00
Q ss_pred -CcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q psy8260 346 -TKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 346 -~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
....+... ...+.++.+||.+||++||.+||||+|+|+||||.....|
T Consensus 337 ~~~~~~~~~-~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 337 GSRPLWTNL-YELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred CCCCCHHHH-hhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 00011111 1346689999999999999999999999999999886544
No 47
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2e-42 Score=331.67 Aligned_cols=264 Identities=27% Similarity=0.437 Sum_probs=189.6
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC---CCCCceeeeeeeecCccccC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM---NHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l---~HpnIv~l~~~~~~~~~~~~ 141 (427)
.|.+.+.||+|+||.||.+.....+|+.||||++..............+|+.+++.+ +||||+++++++..... ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~-~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT-DR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC-CC
Confidence 467788999999999997654445678999998865433322233455677766655 79999999998753221 22
Q ss_pred CceEEEEeccCCCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 142 FKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 142 ~~~~~lv~e~~g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
...+++++|+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 346889999998899888754 35899999999999999999999999999999999999999999999999998643
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
.... ......||+.|+|||++
T Consensus 161 ~~~~-----------------------------------------------------------~~~~~~~~~~y~aPE~~ 181 (290)
T cd07862 161 SFQM-----------------------------------------------------------ALTSVVVTLWYRAPEVL 181 (290)
T ss_pred cCCc-----------------------------------------------------------ccccccccccccChHHH
Confidence 2110 01122456667777766
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcC-------------------CCCCcccHHhhcCCCCh
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSL-------------------PLLTKKDFRQVFKGANP 359 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~s~ 359 (427)
.+..+..++|+||+|++++.|.++..+|......+...+..... .......+....+..++
T Consensus 182 ~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (290)
T cd07862 182 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDE 261 (290)
T ss_pred hCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCH
Confidence 66566667788888888877755544443222111111111110 01111223344456788
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
.++|||.+||++||++|||+.|+|+||||
T Consensus 262 ~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 262 LGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 99999999999999999999999999998
No 48
>KOG0604|consensus
Probab=100.00 E-value=5.5e-44 Score=324.40 Aligned_cols=258 Identities=23% Similarity=0.366 Sum_probs=197.7
Q ss_pred cceeec-cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccC
Q psy8260 64 GVIDIG-PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 64 ~~~~~~-~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~ 141 (427)
.+|.+. ..||-|--|.|+ .+.++.||+++|+|++... .+..||+++.-.. .|||||+++++|.. .+..
T Consensus 61 edY~is~qvLG~GinGkV~-~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeN--s~~~ 130 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVV-QCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYEN--SYQG 130 (400)
T ss_pred hhheehhhhhccccCCceE-EEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhh--hccC
Confidence 345554 578999989998 5778899999999987532 3456788877655 79999999999864 3344
Q ss_pred CceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC---CCCEEEeeCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE---DCELKILDFGL 214 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~---~~~~kl~DFGl 214 (427)
...+.+|||++ ||.|.+-+.. +.|+|.++..+++||+.|+.|||+.+|.||||||||+|... |..+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 56788999998 7888876654 35999999999999999999999999999999999999864 56899999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
|+...... .+.+-|-||+|.|
T Consensus 211 AK~t~~~~-----------------------------------------------------------~L~TPc~TPyYva 231 (400)
T KOG0604|consen 211 AKETQEPG-----------------------------------------------------------DLMTPCFTPYYVA 231 (400)
T ss_pred ccccCCCc-----------------------------------------------------------cccCCcccccccC
Confidence 98644211 1223345777777
Q ss_pred hHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcC----cHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcC
Q psy8260 295 PEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKIS----SDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLE 370 (427)
Q Consensus 295 PEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~ 370 (427)
|||+....|+..+|+||+|+|+|+|..+.+||...-. ..-.+++....-.++.. .|..+|.+++|+|++||.
T Consensus 232 Pevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p----EWs~VSe~aKdlIR~LLk 307 (400)
T KOG0604|consen 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP----EWSCVSEAAKDLIRKLLK 307 (400)
T ss_pred HHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh----hHhHHHHHHHHHHHHHhc
Confidence 7777777788888999999999998776666754322 11122222222233333 455679999999999999
Q ss_pred CCCCCCCCHHHHhcCCCCCCCCCC
Q psy8260 371 LDSEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 371 ~dP~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
.||.+|+|++|+++|||+.+....
T Consensus 308 t~PteRlTI~~~m~hpwi~~~~~v 331 (400)
T KOG0604|consen 308 TEPTERLTIEEVMDHPWINQYEAV 331 (400)
T ss_pred CCchhheeHHHhhcCchhcccccC
Confidence 999999999999999999886543
No 49
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.3e-42 Score=335.56 Aligned_cols=262 Identities=29% Similarity=0.462 Sum_probs=189.6
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.|++.+.||.|+||.||. +.+..+|+.||||++..... ........+|+.+++.++||||+++++++... .
T Consensus 5 ~~y~~~~~lg~G~~g~V~~-~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 76 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYK-GKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTK------E 76 (303)
T ss_pred ccceEeeeEEecCCEEEEE-EEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecC------C
Confidence 4688899999999999996 55667899999999864322 12234567899999999999999999998654 4
Q ss_pred eEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..++++++++++|.+.+.. ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 77 TLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred eEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 6899999998898887754 45899999999999999999999999999999999999999999999999998643211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. ...+..||+.|+|||++.+.
T Consensus 157 ~~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 178 (303)
T cd07869 157 SH----------------------------------------------------------TYSNEVVTLWYRPPDVLLGS 178 (303)
T ss_pred Cc----------------------------------------------------------cCCCCcccCCCCChHHHcCC
Confidence 00 01122355666666665443
Q ss_pred c-CCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHHHhc--------------CC--------CCCcccHHhhcC--
Q psy8260 302 M-HYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKYINS--------------LP--------LLTKKDFRQVFK-- 355 (427)
Q Consensus 302 ~-~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~~~~--------------~~--------~~~~~~~~~~~~-- 355 (427)
. +...+|+||+|++++.|.++..+|...... ......... .+ ......+...+.
T Consensus 179 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (303)
T cd07869 179 TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKL 258 (303)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhcc
Confidence 2 445569999999988775554444321110 000000000 00 001111222222
Q ss_pred CCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 356 GANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 356 ~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
..+++++|||++||++||++|+|++|+|+||||.+.
T Consensus 259 ~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 259 SYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred CCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 245789999999999999999999999999999875
No 50
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.6e-42 Score=331.74 Aligned_cols=260 Identities=25% Similarity=0.446 Sum_probs=190.8
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
+|++.+.||+|+||.||+ +.+..+++.||||++..........+.+.+|+.+++.++||||+++++++... ..
T Consensus 2 ~y~~~~~lg~g~~~~v~~-~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 74 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLK-CRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR------GK 74 (287)
T ss_pred CceEEEEecccCCEEEEE-EEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC------CE
Confidence 578889999999999996 45677899999999875443344455677999999999999999999887643 46
Q ss_pred EEEEeccCCCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 145 VYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
+|+++|++.+.+...+. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 75 LYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 89999999665555443 2468999999999999999999999999999999999999999999999999987532210
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
.. ......||+.|+|||++.+..
T Consensus 155 ~~---------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 177 (287)
T cd07848 155 NA---------------------------------------------------------NYTEYVATRWYRSPELLLGAP 177 (287)
T ss_pred cc---------------------------------------------------------cccccccccccCCcHHHcCCC
Confidence 00 011224667777777776666
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHH--------------HHhcCCCC----------CcccHHhhcCCCC
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARK--------------YINSLPLL----------TKKDFRQVFKGAN 358 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~--------------~~~~~~~~----------~~~~~~~~~~~~s 358 (427)
+..++|+||+|++++.+.++..+|......+.... .....+.. ............+
T Consensus 178 ~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 257 (287)
T cd07848 178 YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILS 257 (287)
T ss_pred CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccC
Confidence 77778999999998887555444422111111000 00001100 0001112234468
Q ss_pred hhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 359 PQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 359 ~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
++++|||++||++||++|+|++|+|+||||
T Consensus 258 ~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 258 GVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 899999999999999999999999999998
No 51
>KOG0582|consensus
Probab=100.00 E-value=2.4e-42 Score=328.78 Aligned_cols=272 Identities=21% Similarity=0.312 Sum_probs=207.2
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
.+....|++...||.|.-+.|| .++...++..||||++.....+. ....+.+|+..|+.++||||++++..|..+
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~-~A~c~p~~e~VAIK~inLEkc~~-~ld~l~kE~~~msl~~HPNIv~~~~sFvv~--- 96 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVY-LARCIPTNEVVAIKIINLEKCNN-DLDALRKEVQTMSLIDHPNIVTYHCSFVVD--- 96 (516)
T ss_pred CCCccceeEEEEEeccceeEee-eeeecccCCEEEEEEeehhhhhh-hHHHHHHHHHHhhhcCCCCcceEEEEEEec---
Confidence 4456789999999999887777 56777888999999997654333 366788999999999999999999999765
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
..+++||.+| +|++.++++. .+++|..+..+.++++.||.|||++|-||||||+.||||+.+|.|||+|||.+
T Consensus 97 ---~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvs 173 (516)
T KOG0582|consen 97 ---SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVS 173 (516)
T ss_pred ---ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceee
Confidence 4689999988 7899999875 46999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
-.+... |++ .......++|||+||||
T Consensus 174 a~l~~~-----G~R-------------------------------------------------~~~rf~tfvgtp~wmAP 199 (516)
T KOG0582|consen 174 ASLFDS-----GDR-------------------------------------------------QVTRFNTFVGTPCWMAP 199 (516)
T ss_pred eeeccc-----Cce-------------------------------------------------eeEeeccccCcccccCh
Confidence 432211 000 00011456788888888
Q ss_pred HHhhh--ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCC-C-CcccHHhhcCCCChhHHHHHHHhcCC
Q psy8260 296 EIMLN--WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPL-L-TKKDFRQVFKGANPQAIDLLSLMLEL 371 (427)
Q Consensus 296 Evl~~--~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~s~~~~dLi~~mL~~ 371 (427)
||+.. ..|+.+.||||+|+...+|..+..||.+--...-....++..|. . +...-.+..+..+..++.+|..||++
T Consensus 200 Evl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~k 279 (516)
T KOG0582|consen 200 EVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVK 279 (516)
T ss_pred HHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhc
Confidence 88543 34777889999999999998887777543222211111222221 1 00111122344567899999999999
Q ss_pred CCCCCCCHHHHhcCCCCCCCCC
Q psy8260 372 DSEKRITAEQALAHPYLSQYSD 393 (427)
Q Consensus 372 dP~~R~ta~e~L~Hp~f~~~~~ 393 (427)
||.|||||.++|+|+||++...
T Consensus 280 DP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 280 DPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred CcccCCCHHHHhccHHHhhccc
Confidence 9999999999999999987543
No 52
>KOG0607|consensus
Probab=100.00 E-value=3.3e-43 Score=321.66 Aligned_cols=281 Identities=23% Similarity=0.386 Sum_probs=208.5
Q ss_pred ccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCceEEE
Q psy8260 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 69 ~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+..||+|+++.|- .+....||+.+|||+|.+. ......+.+||++++.++ .|+||++|+++|+.+ ..+|+
T Consensus 83 ~e~LGeGAyasVq-tcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd------~~FYL 153 (463)
T KOG0607|consen 83 SELLGEGAYASVQ-TCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD------TRFYL 153 (463)
T ss_pred HHHhcCccceeee-eeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc------ceEEE
Confidence 3689999999887 5678889999999999764 445567899999999998 699999999999754 57899
Q ss_pred EeccC-CCCHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC---CCEEEeeCCCCCCCCCCc
Q psy8260 148 VTHLM-GADLN-NILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED---CELKILDFGLARPTENEM 222 (427)
Q Consensus 148 v~e~~-g~~L~-~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~---~~~kl~DFGla~~~~~~~ 222 (427)
|+|-+ ||.|. ++.+...|+|.++..++++|+.||+|||.+||.||||||+|||-... ..+|||||-|+.......
T Consensus 154 VfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 154 VFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred EEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 99877 66654 55566789999999999999999999999999999999999998643 468999998865321110
Q ss_pred -ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-
Q psy8260 223 -TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN- 300 (427)
Q Consensus 223 -~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~- 300 (427)
.+...| | .+.+-+|+-.||||||+.-
T Consensus 234 ~~spast-----P-----------------------------------------------~L~tPvGSAEfMAPEVVd~f 261 (463)
T KOG0607|consen 234 DCSPAST-----P-----------------------------------------------ELLTPVGSAEFMAPEVVDVF 261 (463)
T ss_pred CCCCCCC-----c-----------------------------------------------cccCcccchhhcchhHHhhh
Confidence 001111 1 1223456667777776542
Q ss_pred ----ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHH-----------HHHHHhcCCCCCcccHHhhcCCCChhHHHHH
Q psy8260 301 ----WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDS-----------ARKYINSLPLLTKKDFRQVFKGANPQAIDLL 365 (427)
Q Consensus 301 ----~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi 365 (427)
..|+..+|.||||+|+|+|..+..||...+..+. ..+.+.++......-..+-|..+|.+|+|||
T Consensus 262 v~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdli 341 (463)
T KOG0607|consen 262 VDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLI 341 (463)
T ss_pred ccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHH
Confidence 2366678999999999999888888876554321 1122222111111111223556799999999
Q ss_pred HHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCCCcccccC
Q psy8260 366 SLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTSPPYDQSFEDM 410 (427)
Q Consensus 366 ~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
+.+|.+|+..|.+|.++++|||+........-|+++.+......+
T Consensus 342 snLlvrda~~rlsa~~vlnhPw~~~~~~ekalptp~v~~r~~s~~ 386 (463)
T KOG0607|consen 342 SNLLVRDAKQRLSAAQVLNHPWVQRCAPEKALPTPQVLQRNSSTM 386 (463)
T ss_pred HHHHhccHHhhhhhhhccCCccccccchhccCCCCcccccCccch
Confidence 999999999999999999999999887776777777776544444
No 53
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2e-41 Score=334.38 Aligned_cols=300 Identities=43% Similarity=0.739 Sum_probs=216.8
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.+.|.+.+.||+|+||.||. +.+..+|+.||||.+.+..........+.+|+.+++.++||||++++++|.......+.
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCA-AYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEE-EEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 35688889999999999995 56777899999999876544555556678999999999999999999998765544445
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
...|+++++++++|.+.+... +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~-l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 172 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 172 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhc-CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC
Confidence 568999999988998887654 8999999999999999999999999999999999999999999999999987543211
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. .....||+.|+|||++.+..
T Consensus 173 ~-----------------------------------------------------------~~~~~~~~~y~aPE~~~~~~ 193 (353)
T cd07850 173 M-----------------------------------------------------------MTPYVVTRYYRAPEVILGMG 193 (353)
T ss_pred C-----------------------------------------------------------CCCCcccccccCHHHHhCCC
Confidence 0 00112445555566555555
Q ss_pred CCCCCCHHHHHHHHHHhCCC-----------------------CHHHHhhcCcHHHHHHHhcCCCCCcccHHhhc-----
Q psy8260 303 HYNQTDIHQLNLIMEMLGTP-----------------------PAEFMAKISSDSARKYINSLPLLTKKDFRQVF----- 354 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 354 (427)
+..++|+||+|++++.|.++ +.++...... ....+....+......+.+.+
T Consensus 194 ~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (353)
T cd07850 194 YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQP-TVRNYVENRPKYAGYSFEELFPDVLF 272 (353)
T ss_pred CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh-hhhHHhhcCCCCCCcchhhhCccccc
Confidence 55566777777666555333 2222221111 111111111211111122211
Q ss_pred --------CCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCC--CCCCCcccccCCCCHHHHHHHHhhh
Q psy8260 355 --------KGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPT--SPPYDQSFEDMDLPVDQWKGTYSLE 424 (427)
Q Consensus 355 --------~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (427)
...+++++|||.+||++||++|||+.|+|+||||..+..+.+... +...+...++.+..++.|++++..+
T Consensus 273 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd07850 273 PPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSEVEAPPPAPYDHSIDEREHTVEEWKELIYKE 352 (353)
T ss_pred CcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCccCCCCCCCccccccccccccHHHHHHHHHhh
Confidence 123567899999999999999999999999999998777654433 3344556678899999999987765
No 54
>KOG0611|consensus
Probab=100.00 E-value=2.9e-43 Score=330.72 Aligned_cols=252 Identities=23% Similarity=0.376 Sum_probs=199.3
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
+.+|++.+.||+|.||.|-. +.+...|+.||||.|.+... +..+...+.|||+||+.|+||||+++|++|+..
T Consensus 52 kHRyE~~etLGkGTYGKVk~-A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk----- 125 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKL-AYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK----- 125 (668)
T ss_pred hhHHHHHHHhcCCcccceee-hhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC-----
Confidence 56789999999999999984 67888999999999977544 344566778999999999999999999999765
Q ss_pred CceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..+.+||||. +|.|++++.. +.+++.+++.+++||++|+.|||.++++|||||.+|||+|.++++||+||||+-...
T Consensus 126 -dKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 126 -DKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred -ceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 4578999988 8999998864 679999999999999999999999999999999999999999999999999985432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.. ..+.++||+|.|.+||++.
T Consensus 205 ~~-----------------------------------------------------------kfLqTFCGSPLYASPEIvN 225 (668)
T KOG0611|consen 205 DK-----------------------------------------------------------KFLQTFCGSPLYASPEIVN 225 (668)
T ss_pred cc-----------------------------------------------------------cHHHHhcCCcccCCccccC
Confidence 21 1233455555566666555
Q ss_pred hccCCC-CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYN-QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~-~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
+.+|.. .+|.||||+++|.|-.+..||.........+.+.+. .+. .+....+|.-||+.||..||.+|.|
T Consensus 226 G~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G--aYr-------EP~~PSdA~gLIRwmLmVNP~RRAT 296 (668)
T KOG0611|consen 226 GTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG--AYR-------EPETPSDASGLIRWMLMVNPERRAT 296 (668)
T ss_pred CCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc--ccc-------CCCCCchHHHHHHHHHhcCcccchh
Confidence 555543 359999999999998777777654332222222111 000 0223457899999999999999999
Q ss_pred HHHHhcCCCCC
Q psy8260 379 AEQALAHPYLS 389 (427)
Q Consensus 379 a~e~L~Hp~f~ 389 (427)
++++-+|=|+.
T Consensus 297 ieDiAsHWWvN 307 (668)
T KOG0611|consen 297 IEDIASHWWVN 307 (668)
T ss_pred HHHHhhhheee
Confidence 99999998886
No 55
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.9e-42 Score=349.81 Aligned_cols=267 Identities=30% Similarity=0.464 Sum_probs=186.9
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
.....|.+++.||+|+||.||.+ .+..+++.||||++.... ....+|+.+|+.++|||||+++++|.......
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~-~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEA-ICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEE-EECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 34567999999999999999964 566789999999885432 12347999999999999999999875432111
Q ss_pred --CCceEEEEeccCCCCHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC-CCEEEeeC
Q psy8260 141 --DFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED-CELKILDF 212 (427)
Q Consensus 141 --~~~~~~lv~e~~g~~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~-~~~kl~DF 212 (427)
....++++||++++++.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+||
T Consensus 136 ~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred CCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 123467899999888877664 3468999999999999999999999999999999999999865 47999999
Q ss_pred CCCCCCCC--CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccc
Q psy8260 213 GLARPTEN--EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR 290 (427)
Q Consensus 213 Gla~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~ 290 (427)
|+|+.... ....++||+.|+|||++.+..
T Consensus 216 Gla~~~~~~~~~~~~~~t~~y~aPE~~~~~~------------------------------------------------- 246 (440)
T PTZ00036 216 GSAKNLLAGQRSVSYICSRFYRAPELMLGAT------------------------------------------------- 246 (440)
T ss_pred ccchhccCCCCcccCCCCcCccCHHHhcCCC-------------------------------------------------
Confidence 99975432 222344555555555544322
Q ss_pred cccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh--------------------cCCCCCcccH
Q psy8260 291 WYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN--------------------SLPLLTKKDF 350 (427)
Q Consensus 291 ~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~ 350 (427)
.+..++|+||+|++++.|.++..+|......+....... ..+......+
T Consensus 247 -----------~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 315 (440)
T PTZ00036 247 -----------NYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDL 315 (440)
T ss_pred -----------CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhH
Confidence 233445666666666555444333322111111111110 0111122223
Q ss_pred Hhhc-CCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q psy8260 351 RQVF-KGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 351 ~~~~-~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
...+ ...+++++|||.+||++||.+|+|+.|+|+||||.....+
T Consensus 316 ~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~ 360 (440)
T PTZ00036 316 KKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDP 360 (440)
T ss_pred HHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcc
Confidence 3322 3467899999999999999999999999999999887654
No 56
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.7e-42 Score=336.58 Aligned_cols=249 Identities=22% Similarity=0.335 Sum_probs=193.1
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv 148 (427)
+.||+|+||.||. +.+..+|+.||||++.+... .........+|+.+++.++||||++++++|... ..+|++
T Consensus 1 ~~lG~G~~g~Vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~------~~~~lv 73 (323)
T cd05571 1 KLLGKGTFGKVIL-VREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH------DRLCFV 73 (323)
T ss_pred CeeeeCCCeEEEE-EEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC------CEEEEE
Confidence 3689999999996 45677899999999875322 223345567899999999999999999988654 467899
Q ss_pred eccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccc
Q psy8260 149 THLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 226 (427)
Q Consensus 149 ~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 226 (427)
||++ +++|...+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--- 150 (323)
T cd05571 74 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA--- 150 (323)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC---
Confidence 9988 6788877754 5689999999999999999999999999999999999999999999999999863211000
Q ss_pred ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCC
Q psy8260 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306 (427)
Q Consensus 227 gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~ 306 (427)
.....+||+.|+|||++.+..+...
T Consensus 151 -------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~ 175 (323)
T cd05571 151 -------------------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRA 175 (323)
T ss_pred -------------------------------------------------------cccceecCccccChhhhcCCCCCcc
Confidence 1112357788888888877777788
Q ss_pred CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-----CHHH
Q psy8260 307 TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-----TAEQ 381 (427)
Q Consensus 307 ~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-----ta~e 381 (427)
+|+||+|++++.|.++..||................. .+....++++.+||.+||+.||++|+ +++|
T Consensus 176 ~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~--------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ 247 (323)
T cd05571 176 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKE 247 (323)
T ss_pred ccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHH
Confidence 8999999999988777766644322111111111111 11235789999999999999999999 8999
Q ss_pred HhcCCCCCCC
Q psy8260 382 ALAHPYLSQY 391 (427)
Q Consensus 382 ~L~Hp~f~~~ 391 (427)
+++||||...
T Consensus 248 ll~h~~f~~~ 257 (323)
T cd05571 248 IMEHRFFASI 257 (323)
T ss_pred HHcCCCcCCC
Confidence 9999999864
No 57
>KOG4236|consensus
Probab=100.00 E-value=2.6e-43 Score=340.08 Aligned_cols=252 Identities=25% Similarity=0.430 Sum_probs=201.4
Q ss_pred ccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEE
Q psy8260 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 69 ~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv 148 (427)
.++||.|+||.|| ++.++++|+.||||+|.+..-...+..+..+|+.||.++.||.||.|-..|++. +.+++|
T Consensus 569 devLGSGQFG~VY-gg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~------ervFVV 641 (888)
T KOG4236|consen 569 DEVLGSGQFGTVY-GGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP------ERVFVV 641 (888)
T ss_pred HhhccCCcceeee-cceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC------ceEEEE
Confidence 4689999999999 678899999999999987554455556778999999999999999999888765 568999
Q ss_pred eccCCCCHHHHH---hhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC---CCEEEeeCCCCCCCCCCc
Q psy8260 149 THLMGADLNNIL---RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED---CELKILDFGLARPTENEM 222 (427)
Q Consensus 149 ~e~~g~~L~~~l---~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~---~~~kl~DFGla~~~~~~~ 222 (427)
||-+.||+...+ ..+++++...+.++.||+.||.|||-++|+|+||||||||+... -.+||||||.||.+.+..
T Consensus 642 MEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 642 MEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred ehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 999888876654 24679999999999999999999999999999999999999753 479999999999765431
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
-+.+.+|||.|+||||+++..
T Consensus 722 -----------------------------------------------------------FRrsVVGTPAYLaPEVLrnkG 742 (888)
T KOG4236|consen 722 -----------------------------------------------------------FRRSVVGTPAYLAPEVLRNKG 742 (888)
T ss_pred -----------------------------------------------------------hhhhhcCCccccCHHHHhhcc
Confidence 123446777777777777777
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
|...-|+||.|+|+|.-..+.+||... ++....+-+.-..++..+| ..++++|+|||.++|+..=.||.|+++.
T Consensus 743 yNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW----~eis~~AidlIn~LLqVkm~kRysvdk~ 816 (888)
T KOG4236|consen 743 YNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPW----SEISPEAIDLINNLLQVKMRKRYSVDKS 816 (888)
T ss_pred ccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCch----hhcCHHHHHHHHHHHHHHHHHhcchHhh
Confidence 777779999999988777777777532 1222222222223444444 4579999999999999999999999999
Q ss_pred hcCCCCCCCC
Q psy8260 383 LAHPYLSQYS 392 (427)
Q Consensus 383 L~Hp~f~~~~ 392 (427)
|.|||++++.
T Consensus 817 lsh~Wlq~yq 826 (888)
T KOG4236|consen 817 LSHPWLQDYQ 826 (888)
T ss_pred ccchhhhcch
Confidence 9999998753
No 58
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.2e-41 Score=332.72 Aligned_cols=321 Identities=53% Similarity=0.889 Sum_probs=226.6
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+...||.|+||.||.+ .+..+|+.||||++.+..........+.+|+.+++.++||||+++++++..........
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSA-IDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEE-EeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 46788899999999999964 56678999999998765433333455779999999999999999999986544333445
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 144 NVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
.+|++++++..+|..+. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 94 ~~~lv~e~~~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~ 172 (342)
T cd07879 94 DFYLVMPYMQTDLQKIM-GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 172 (342)
T ss_pred eEEEEecccccCHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCC
Confidence 67899999988887765 34689999999999999999999999999999999999999999999999999876544444
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
...++..|+|||++.+...++.. .|+|+.|+++.+ +..|.. .
T Consensus 173 ~~~~~~~y~aPE~~~~~~~~~~~------~Dv~slGvil~e-----------------l~~g~~---------------p 214 (342)
T cd07879 173 GYVVTRWYRAPEVILNWMHYNQT------VDIWSVGCIMAE-----------------MLTGKT---------------L 214 (342)
T ss_pred CceeeecccChhhhcCccccCch------HHHHHHHHHHHH-----------------HHhCCC---------------C
Confidence 45666667777765432222111 244444444332 111110 1
Q ss_pred CCCCC-HHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 304 YNQTD-IHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 304 ~~~~d-~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
+.+.+ ...+..++..+|.+..++...........+....+......+...++..++++++||.+||+.||.+|+|++|+
T Consensus 215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~ 294 (342)
T cd07879 215 FKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEA 294 (342)
T ss_pred CCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 11111 11222233333333333332222211222222334444445555566788999999999999999999999999
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCcccccCCCCHHHHHHHHhhh
Q psy8260 383 LAHPYLSQYSDPNDEPTSPPYDQSFEDMDLPVDQWKGTYSLE 424 (427)
Q Consensus 383 L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (427)
+.||||.........+.+.+++.+.++....++.|.+-+..|
T Consensus 295 l~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (342)
T cd07879 295 LEHPYFDSFRDADEETEQQPYDDSLENEKLSVDEWKKHIYKE 336 (342)
T ss_pred hcCcchhhcccccccCCCCcccchhhhhhCCHHHHHHHhhhh
Confidence 999999998776666667778888888899999998888665
No 59
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.6e-42 Score=329.36 Aligned_cols=251 Identities=24% Similarity=0.338 Sum_probs=194.0
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||+|+||.||. +.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++... .
T Consensus 2 ~y~~~~~lg~G~~g~Vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------~ 74 (291)
T cd05612 2 DLERIKTVGTGTFGRVHL-VRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ------R 74 (291)
T ss_pred CceeeeeeecCCCeEEEE-EEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC------C
Confidence 467789999999999996 45677899999999864322 122345577899999999999999999877543 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|+++|++ +++|.+++.. +.+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 75 FLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 678899877 7899888754 56899999999999999999999999999999999999999999999999998643322
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
... .+||+.|+|||++.+.
T Consensus 155 ~~~-------------------------------------------------------------~~gt~~y~aPE~~~~~ 173 (291)
T cd05612 155 TWT-------------------------------------------------------------LCGTPEYLAPEVIQSK 173 (291)
T ss_pred ccc-------------------------------------------------------------ccCChhhcCHHHHcCC
Confidence 111 2366667777777666
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC---
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT--- 378 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t--- 378 (427)
.+..++|+||+|++++.|.++..+|.................. .....++.++|||.+||+.||.+|++
T Consensus 174 ~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 245 (291)
T cd05612 174 GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE--------FPRHLDLYAKDLIKKLLVVDRTRRLGNMK 245 (291)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC--------CCccCCHHHHHHHHHHcCCCHHHccCCcc
Confidence 6777789999999999887666655433222222222211111 12345889999999999999999995
Q ss_pred --HHHHhcCCCCCCC
Q psy8260 379 --AEQALAHPYLSQY 391 (427)
Q Consensus 379 --a~e~L~Hp~f~~~ 391 (427)
++|+++||||...
T Consensus 246 ~~~~~~l~h~~~~~~ 260 (291)
T cd05612 246 NGADDVKNHRWFKSV 260 (291)
T ss_pred CCHHHHhcCccccCC
Confidence 9999999999864
No 60
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.6e-42 Score=335.24 Aligned_cols=253 Identities=22% Similarity=0.341 Sum_probs=196.9
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
...|.+.+.||+|+||.||.+ .+..+|+.||||++..... .......+.+|+.+++.++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----- 90 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIA-KHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE----- 90 (329)
T ss_pred chheEEEEEEEecCCeEEEEE-EECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC-----
Confidence 356889999999999999964 5667899999999864321 122345577999999999999999999988654
Q ss_pred CceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..+|++++++ +++|.+.+.. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 91 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 91 -NRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred -CEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 4678999987 7899887754 568999999999999999999999999999999999999999999999999986432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..... ..||+.|+|||++.
T Consensus 170 ~~~~~-------------------------------------------------------------~~gt~~y~aPE~~~ 188 (329)
T PTZ00263 170 DRTFT-------------------------------------------------------------LCGTPEYLAPEVIQ 188 (329)
T ss_pred CCcce-------------------------------------------------------------ecCChhhcCHHHHc
Confidence 22111 24666777777776
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC-
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT- 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t- 378 (427)
+..+..++|+||+|++++.|.++..+|.................. .....+++++|||.+||+.||.+|++
T Consensus 189 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--------~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 189 SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLK--------FPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred CCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcC--------CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 666777889999999999887776666433221222222211111 12336789999999999999999997
Q ss_pred ----HHHHhcCCCCCCC
Q psy8260 379 ----AEQALAHPYLSQY 391 (427)
Q Consensus 379 ----a~e~L~Hp~f~~~ 391 (427)
++|+++||||.+.
T Consensus 261 ~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 261 LKGGVADVKNHPYFHGA 277 (329)
T ss_pred CCCCHHHHhcCCccCCC
Confidence 7999999999863
No 61
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=334.33 Aligned_cols=257 Identities=24% Similarity=0.342 Sum_probs=199.8
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
.+....|.+.+.||+|+||.||.+......+..||+|++..... .......+.+|+.+++.++||||+++++++...
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~-- 103 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE-- 103 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC--
Confidence 34556788999999999999998765554557899998864321 223345577899999999999999999998654
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
..+|++||++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 104 ----~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 104 ----SYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAK 179 (340)
T ss_pred ----CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence 4678999988 7899988854 579999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
....... ..+||+.|+|||
T Consensus 180 ~~~~~~~-------------------------------------------------------------~~~gt~~y~aPE 198 (340)
T PTZ00426 180 VVDTRTY-------------------------------------------------------------TLCGTPEYIAPE 198 (340)
T ss_pred ecCCCcc-------------------------------------------------------------eecCChhhcCHH
Confidence 4322211 224667777777
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
++.+..+...+|+||+|++++.|.++..||.................. .....++++.+||++||+.||.+|
T Consensus 199 ~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~--------~p~~~~~~~~~li~~~l~~dp~~R 270 (340)
T PTZ00426 199 ILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY--------FPKFLDNNCKHLMKKLLSHDLTKR 270 (340)
T ss_pred HHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC--------CCCCCCHHHHHHHHHHcccCHHHc
Confidence 776666777789999999999987776666543222222222211111 123468899999999999999999
Q ss_pred C-----CHHHHhcCCCCCCC
Q psy8260 377 I-----TAEQALAHPYLSQY 391 (427)
Q Consensus 377 ~-----ta~e~L~Hp~f~~~ 391 (427)
+ |++|+++||||.+.
T Consensus 271 ~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 271 YGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred CCCCCCCHHHHHcCCCcCCC
Confidence 6 89999999999865
No 62
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.8e-41 Score=327.19 Aligned_cols=163 Identities=34% Similarity=0.578 Sum_probs=126.5
Q ss_pred ccccCcccccEEEEeEE-eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 69 GPTLSKESFDLIFSSAL-DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 69 ~~~lg~g~fg~v~~~~~-~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
++.||+|+||.||++.. +..+++.||+|.+..... .....+|+++|++++||||++++++|... ....+|+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~~~l 77 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH----ADRKVWL 77 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecC----CCcEEEE
Confidence 56899999999997654 335778999999865422 23356899999999999999999988542 2246889
Q ss_pred EeccCCCCHHHHHhh----------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEE----cCCCCEEEeeCC
Q psy8260 148 VTHLMGADLNNILRT----------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV----NEDCELKILDFG 213 (427)
Q Consensus 148 v~e~~g~~L~~~l~~----------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl----~~~~~~kl~DFG 213 (427)
++++++++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 78 v~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 78 LFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred EEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 999999999887642 248899999999999999999999999999999999999 456789999999
Q ss_pred CCCCCCCC------cccccccccccchhhhhc
Q psy8260 214 LARPTENE------MTGYVATRWYRAPEIMLN 239 (427)
Q Consensus 214 la~~~~~~------~~~~~gt~~y~aPE~l~~ 239 (427)
+++..... .....||+.|+|||++.+
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 189 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLG 189 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcC
Confidence 99754321 122344555555555443
No 63
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.2e-41 Score=323.88 Aligned_cols=262 Identities=29% Similarity=0.443 Sum_probs=188.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC---CCCCceeeeeeeecCccccCC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM---NHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l---~HpnIv~l~~~~~~~~~~~~~ 142 (427)
|.+.+.||+|+||.||. +.+..+|+.||+|.+..............+|+.+++.+ +||||+++++++..... ...
T Consensus 2 y~~~~~lg~g~~g~v~~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~-~~~ 79 (288)
T cd07863 2 YEPVAEIGVGAYGTVYK-ARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRT-DRE 79 (288)
T ss_pred ceEeeEEeecCCeEEEE-EEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccC-CCC
Confidence 66788999999999996 55777899999998865322222223345666666554 79999999998764321 223
Q ss_pred ceEEEEeccCCCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..++++++++.++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 80 TKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred ceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 46789999998888887754 348999999999999999999999999999999999999999999999999986432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... .....||+.|+|||++.
T Consensus 160 ~~~~-----------------------------------------------------------~~~~~~~~~y~aPE~~~ 180 (288)
T cd07863 160 CQMA-----------------------------------------------------------LTPVVVTLWYRAPEVLL 180 (288)
T ss_pred Cccc-----------------------------------------------------------CCCccccccccCchHhh
Confidence 2100 01123566677777776
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcC-------------------CCCCcccHHhhcCCCChh
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSL-------------------PLLTKKDFRQVFKGANPQ 360 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~s~~ 360 (427)
+..+..++|+||+|++++.|.++..+|......+...+..... ............+.++.+
T Consensus 181 ~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (288)
T cd07863 181 QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEES 260 (288)
T ss_pred CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHH
Confidence 6667777899999999887755444443221111111111100 001112233444567889
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 361 AIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 361 ~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
+.|||.+||++||++|+|+.|+++||||
T Consensus 261 ~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 261 GAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred HHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999999998
No 64
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.9e-41 Score=328.99 Aligned_cols=247 Identities=24% Similarity=0.360 Sum_probs=191.3
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEec
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e 150 (427)
||+|+||.||. +.+..+++.||+|++.+... .......+.+|+.++++++||||+++++++... ...|++++
T Consensus 1 lg~G~~g~Vy~-~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e 73 (312)
T cd05585 1 IGKGSFGKVMQ-VRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP------EKLYLVLA 73 (312)
T ss_pred CCcCCCeEEEE-EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC------CeEEEEEc
Confidence 68999999996 55677899999999864321 233345677899999999999999999888653 46789998
Q ss_pred cC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccccc
Q psy8260 151 LM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228 (427)
Q Consensus 151 ~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt 228 (427)
++ +++|.+++.. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~----- 148 (312)
T cd05585 74 FINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD----- 148 (312)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC-----
Confidence 88 7899887754 5799999999999999999999999999999999999999999999999999864211100
Q ss_pred ccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCC
Q psy8260 229 RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD 308 (427)
Q Consensus 229 ~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d 308 (427)
.....+||+.|+|||++.+..+..++|
T Consensus 149 -----------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~D 175 (312)
T cd05585 149 -----------------------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVD 175 (312)
T ss_pred -----------------------------------------------------ccccccCCcccCCHHHHcCCCCCCccc
Confidence 011235777788888877777777889
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC---CHHHHhcC
Q psy8260 309 IHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI---TAEQALAH 385 (427)
Q Consensus 309 ~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~---ta~e~L~H 385 (427)
+||+|++++.|.++..||................. ......++++++||.+||+.||.+|+ ++.|+|+|
T Consensus 176 vwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 176 WWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL--------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred eechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC--------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 99999999988776666644322222222221111 12245788999999999999999997 58999999
Q ss_pred CCCCCC
Q psy8260 386 PYLSQY 391 (427)
Q Consensus 386 p~f~~~ 391 (427)
|||.+.
T Consensus 248 p~~~~~ 253 (312)
T cd05585 248 PFFSQL 253 (312)
T ss_pred CCcCCC
Confidence 999874
No 65
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.3e-41 Score=333.18 Aligned_cols=259 Identities=20% Similarity=0.324 Sum_probs=196.2
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||+|+||.||. +.+..+|+.||||++.+.... ......+.+|+.+++.++||||+++++++... .
T Consensus 2 ~y~~~~~ig~G~~g~Vy~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~------~ 74 (333)
T cd05600 2 DFQILTQVGQGGYGQVFL-AKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD------E 74 (333)
T ss_pred CcEEEEEEeecCCeEEEE-EEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC------C
Confidence 578889999999999996 456678999999998654221 12345577899999999999999999988654 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|+++|++ +++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~ 154 (333)
T cd05600 75 YLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY 154 (333)
T ss_pred EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccc
Confidence 688999988 7899998864 56899999999999999999999999999999999999999999999999998743322
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
... ..||+.|+|||++.+.
T Consensus 155 ~~~-------------------------------------------------------------~~gt~~y~aPE~~~~~ 173 (333)
T cd05600 155 ANS-------------------------------------------------------------VVGSPDYMAPEVLRGK 173 (333)
T ss_pred cCC-------------------------------------------------------------cccCccccChhHhcCC
Confidence 222 2456666666666666
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHH
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQ 381 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e 381 (427)
.+..++|+||+|++++.|.++..||......+........................++++.+||.+||..+|.+|+|++|
T Consensus 174 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ 253 (333)
T cd05600 174 GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLED 253 (333)
T ss_pred CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHH
Confidence 67777899999999988866665554322212111111111111110111111246889999999999999999999999
Q ss_pred HhcCCCCCCC
Q psy8260 382 ALAHPYLSQY 391 (427)
Q Consensus 382 ~L~Hp~f~~~ 391 (427)
+++||||.+.
T Consensus 254 ll~h~~~~~~ 263 (333)
T cd05600 254 IKNHPFFKEV 263 (333)
T ss_pred HHhCcccCCC
Confidence 9999999875
No 66
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.1e-41 Score=337.44 Aligned_cols=293 Identities=19% Similarity=0.277 Sum_probs=203.3
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|++.+.||+|+||.||. +.+..+|+.||||++..... .......+.+|+.+|+.++||||++++++|... .
T Consensus 2 ~y~~~~~lG~G~~g~V~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------~ 74 (364)
T cd05599 2 DFESIKVIGRGAFGEVRL-VQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE------N 74 (364)
T ss_pred CceEEEEEEecCCEEEEE-EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC------C
Confidence 477889999999999996 55677899999999865321 122344567899999999999999999998754 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|++||++ +++|.+++.. ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 75 YLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred eEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 678999988 7899888754 56899999999999999999999999999999999999999999999999998754321
Q ss_pred cccc--cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 222 MTGY--VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 222 ~~~~--~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... .....+..+.... ....+. .. + .....+.. .......+.+||+.|+|||++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~-~--------~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~ 212 (364)
T cd05599 155 HRTEFYRILSHALPSNFLD------FISKPM-----SS-K--------RKAETWKR--NRRALAYSTVGTPDYIAPEVFL 212 (364)
T ss_pred ccccccccccccccccccc------cccccc-----cc-c--------ccccchhh--cccccccccccCccccCHHHHc
Confidence 1100 0000000000000 000000 00 0 00000000 0001223457999999999999
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC-
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT- 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t- 378 (427)
+..+..++|+||+|++++.|.++..+|..........+.......... . .....+++++|||.+||. ||.+|++
T Consensus 213 ~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~-~~~~~s~~~~~li~~ll~-~p~~R~~~ 287 (364)
T cd05599 213 QTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQF---P-DEVPLSPEAKDLIKRLCC-EAERRLGN 287 (364)
T ss_pred CCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCC---C-CCCCCCHHHHHHHHHHcc-CHhhcCCC
Confidence 888888899999999999887766666433222222222221111110 0 012468999999999997 9999998
Q ss_pred --HHHHhcCCCCCCC
Q psy8260 379 --AEQALAHPYLSQY 391 (427)
Q Consensus 379 --a~e~L~Hp~f~~~ 391 (427)
++|+++||||...
T Consensus 288 ~~~~~ll~h~~~~~~ 302 (364)
T cd05599 288 NGVNEIKSHPFFKGV 302 (364)
T ss_pred CCHHHHhcCCCcCCC
Confidence 9999999999865
No 67
>KOG0664|consensus
Probab=100.00 E-value=3e-43 Score=315.94 Aligned_cols=285 Identities=37% Similarity=0.639 Sum_probs=228.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
++-.+.||-|.||.|| ++.|..+|++||+|++..-+++-...+++++|+.+|..++|.|++..+++.... ....+..+
T Consensus 55 i~PDRPIGYGAFGVVW-sVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPp-h~dfFqEi 132 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVW-SVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPA-NPSFFQEL 132 (449)
T ss_pred CCCCCcccccceeEEE-eccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCC-CchHHHHH
Confidence 4455789999999998 567888999999999987776667778899999999999999999999887643 23344678
Q ss_pred EEEeccCCCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC----
Q psy8260 146 YMVTHLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN---- 220 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~---- 220 (427)
|++.|++..||.+++- .+.++.++++-+++||++||+|||+.+|+||||||.|+|++.+..+||||||+||..+.
T Consensus 133 YV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL 212 (449)
T ss_pred HHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence 9999999999998774 57899999999999999999999999999999999999999999999999999997654
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.++..+.|.+|+|||++.|.++|+... |+|+.||+++|- +. .
T Consensus 213 hMTqEVVTQYYRAPEiLMGaRhYs~Av------DiWSVGCIFaEL-----------------Lg---------------R 254 (449)
T KOG0664|consen 213 NMTHEVVTQYYRAPELLMGARRYTGAV------DIWSVGCIFAEL-----------------LQ---------------R 254 (449)
T ss_pred hhHHHHHHHHhccHHHhhcchhhcCcc------ceehhhHHHHHH-----------------Hh---------------h
Confidence 355668899999999999999999887 999999999872 11 1
Q ss_pred ccCC-CCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhc-----CCCChhHHHHHHHhcCCCCC
Q psy8260 301 WMHY-NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVF-----KGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 301 ~~~~-~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~s~~~~dLi~~mL~~dP~ 374 (427)
..+| ....+.+|.+|..+||+|..+-+....+......++.-++.+. +...+ .....++.+++.+||.+||.
T Consensus 255 rILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps--~~vLYtlsS~~~~~heav~~~~~~l~~d~d 332 (449)
T KOG0664|consen 255 KILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPD--TQRLYKIASPDDKNHEAVDLLQKLLHFDPD 332 (449)
T ss_pred hhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCC--ccceeeecCCcccchHHHHHHHHHhCCCCc
Confidence 1133 3457899999999999999887654433322223322221111 11111 12346889999999999999
Q ss_pred CCCCHHHHhcCCCCCCCC
Q psy8260 375 KRITAEQALAHPYLSQYS 392 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f~~~~ 392 (427)
+|++.++++.|+|..+.+
T Consensus 333 kris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 333 KRISVEEALQHRYLEEGR 350 (449)
T ss_pred ccccHhhhcccccccccc
Confidence 999999999999998654
No 68
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.7e-41 Score=328.16 Aligned_cols=317 Identities=47% Similarity=0.820 Sum_probs=227.8
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||.|+||.||. +.+..+|+.||+|++............+.+|+.+|+.++||||++++++|.... ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~-~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~ 81 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCS-AIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG--ADFK 81 (334)
T ss_pred hceeeeeeeecCCCeEEEE-EEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC--CCCc
Confidence 5678889999999999995 556778999999998754333334556778999999999999999999876543 2335
Q ss_pred eEEEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC-
Q psy8260 144 NVYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE- 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~- 221 (427)
..|+++++++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 82 DVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred eEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 6899999998899888853 56899999999999999999999999999999999999999999999999998754321
Q ss_pred ------cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 222 ------MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 222 ------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
.....++.+|+|||++.+...++.. .|+|+.|+++.+ +..+ .+.|
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~------~Di~slG~~l~e-----------------l~~g---~~pf--- 212 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTA------IDMWSVGCIFAE-----------------MLGR---RQLF--- 212 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccc------cchHHHHHHHHH-----------------HHcC---CCcc---
Confidence 1233566667777765432222222 255555555443 1111 1111
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
.......++..+...+|.++..+................+......+...++..++++.+||.+||+.||.+
T Consensus 213 --------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 284 (334)
T cd07855 213 --------PGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEE 284 (334)
T ss_pred --------CCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhh
Confidence 011122334445555566655555444444344444444444444556666778999999999999999999
Q ss_pred CCCHHHHhcCCCCCCCCCCCCCCCC-CCCCcccccCCCCHHHHHHH
Q psy8260 376 RITAEQALAHPYLSQYSDPNDEPTS-PPYDQSFEDMDLPVDQWKGT 420 (427)
Q Consensus 376 R~ta~e~L~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 420 (427)
|||++++++||||.+...+..++.. ++++..++....+.++....
T Consensus 285 Rpt~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (334)
T cd07855 285 RITVEQALQHPFLAQYHDPDDEPTCPPPFDFDFEAIELSREQLKEA 330 (334)
T ss_pred CcCHHHHHhChhhhhccCCcccccCCCCCCCChhhhhcChhhHHHH
Confidence 9999999999999999888877766 77877777666666665543
No 69
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.3e-41 Score=323.00 Aligned_cols=258 Identities=20% Similarity=0.252 Sum_probs=194.1
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
|.+.+.||+|+||.||. +.+..+|+.||||.+...... ......+.+|+.+++.++|+||+++++++... ..
T Consensus 2 f~~~~~lg~G~~g~V~~-~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~------~~ 74 (285)
T cd05631 2 FRHYRVLGKGGFGEVCA-CQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK------DA 74 (285)
T ss_pred ceEEEEEecCCCEEEEE-EEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC------Ce
Confidence 56678899999999996 456678999999988653222 22234467899999999999999999887653 35
Q ss_pred EEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.+++++++ +++|...+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 75 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 75 LCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred EEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 78888877 6889876642 3589999999999999999999999999999999999999999999999999864321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.. ......||+.|+|||++.+
T Consensus 155 ~~-----------------------------------------------------------~~~~~~g~~~y~aPE~~~~ 175 (285)
T cd05631 155 GE-----------------------------------------------------------TVRGRVGTVGYMAPEVINN 175 (285)
T ss_pred CC-----------------------------------------------------------eecCCCCCCCccCHhhhcC
Confidence 10 0112346777888888777
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC--
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT-- 378 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t-- 378 (427)
..+...+|+||+|++++.|.++..||................... ...+....++++.+||.+||+.||.+|+|
T Consensus 176 ~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05631 176 EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED----QEEYSEKFSEDAKSICRMLLTKNPKERLGCR 251 (285)
T ss_pred CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc----cccCCccCCHHHHHHHHHHhhcCHHHhcCCC
Confidence 777778899999999988876666664332211111111111100 01123457899999999999999999997
Q ss_pred ---HHHHhcCCCCCCCCC
Q psy8260 379 ---AEQALAHPYLSQYSD 393 (427)
Q Consensus 379 ---a~e~L~Hp~f~~~~~ 393 (427)
++|+++||||.+...
T Consensus 252 ~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 252 GNGAAGVKQHPIFKNINF 269 (285)
T ss_pred CCCHHHHhcCHhhcCCCH
Confidence 999999999987643
No 70
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.1e-41 Score=328.35 Aligned_cols=249 Identities=24% Similarity=0.330 Sum_probs=191.9
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv 148 (427)
+.||+|+||.||. +.+..+|+.||||++.+... .......+.+|+++++.++||||+++++++... ..+|++
T Consensus 1 ~~lG~G~~g~Vy~-~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------~~~~lv 73 (328)
T cd05593 1 KLLGKGTFGKVIL-VREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK------DRLCFV 73 (328)
T ss_pred CeeeeCCCEEEEE-EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC------CEEEEE
Confidence 3689999999995 55677899999999865422 223345677899999999999999999888654 467899
Q ss_pred eccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccc
Q psy8260 149 THLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 226 (427)
Q Consensus 149 ~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 226 (427)
||++ +++|...+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 ~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~--- 150 (328)
T cd05593 74 MEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA--- 150 (328)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc---
Confidence 9988 6788877654 5699999999999999999999999999999999999999999999999999864211100
Q ss_pred ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCC
Q psy8260 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306 (427)
Q Consensus 227 gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~ 306 (427)
.....+||+.|+|||++.+..+..+
T Consensus 151 -------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~ 175 (328)
T cd05593 151 -------------------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRA 175 (328)
T ss_pred -------------------------------------------------------ccccccCCcCccChhhhcCCCCCcc
Confidence 0112347777888888777777778
Q ss_pred CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-----CHHH
Q psy8260 307 TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-----TAEQ 381 (427)
Q Consensus 307 ~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-----ta~e 381 (427)
+|+||+|++++.|.++..||................. .+....++++.+||.+||+.||.+|+ |++|
T Consensus 176 ~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~--------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ 247 (328)
T cd05593 176 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI--------KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKE 247 (328)
T ss_pred CCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc--------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 8999999999988776666643321111111111111 12245789999999999999999998 8999
Q ss_pred HhcCCCCCCC
Q psy8260 382 ALAHPYLSQY 391 (427)
Q Consensus 382 ~L~Hp~f~~~ 391 (427)
+++||||...
T Consensus 248 il~h~~~~~~ 257 (328)
T cd05593 248 IMRHSFFTGV 257 (328)
T ss_pred HhcCCCcCCC
Confidence 9999999763
No 71
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.3e-41 Score=335.04 Aligned_cols=263 Identities=22% Similarity=0.307 Sum_probs=198.7
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
.+....|.+.+.||+|+||.||. +.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++...
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~-- 115 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQL-VRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD-- 115 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEE-EEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC--
Confidence 34456789999999999999996 55677899999999864321 122234466899999999999999999888654
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
..+|+++|++ |++|.+++....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 116 ----~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 116 ----KYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred ----CEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence 4688999988 78999999888899999999999999999999999999999999999999999999999999864
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
....... .....+||+.|+|||+
T Consensus 192 ~~~~~~~---------------------------------------------------------~~~~~~gt~~y~aPE~ 214 (370)
T cd05596 192 MDANGMV---------------------------------------------------------RCDTAVGTPDYISPEV 214 (370)
T ss_pred ccCCCcc---------------------------------------------------------cCCCCCCCcCeECHHH
Confidence 3221000 0012235666666666
Q ss_pred hhhc----cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 298 MLNW----MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 298 l~~~----~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
+.+. .+..++|+||+|++++.|.++..||..........+......... +. ....++.+++|||.+||+.+|
T Consensus 215 ~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~---~~-~~~~~s~~~~~li~~~L~~~p 290 (370)
T cd05596 215 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT---FP-DDIEISKQAKDLICAFLTDRE 290 (370)
T ss_pred hccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC---CC-CcCCCCHHHHHHHHHHccChh
Confidence 5432 245578999999999988777766654433222333322111111 10 112468999999999999999
Q ss_pred CC--CCCHHHHhcCCCCCC
Q psy8260 374 EK--RITAEQALAHPYLSQ 390 (427)
Q Consensus 374 ~~--R~ta~e~L~Hp~f~~ 390 (427)
.+ |+|++|+++||||.+
T Consensus 291 ~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 291 VRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred hccCCCCHHHHhcCcccCC
Confidence 98 999999999999986
No 72
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.3e-40 Score=324.61 Aligned_cols=303 Identities=45% Similarity=0.730 Sum_probs=215.9
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.|.+.+.||+|+||.||. +.+..+|+.||||++.... .......+.+|+.++++++||||+++++++....+ ....
T Consensus 5 ~~y~i~~~lg~G~~g~vy~-~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 81 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCS-ATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSF-ESFN 81 (336)
T ss_pred cceEEEEEEEecCCeEEEE-EEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccc-cccc
Confidence 5688999999999999996 4566789999999986422 22334557789999999999999999988764422 2334
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 144 NVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
.+|+++++++++|.+++..+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 161 (336)
T cd07849 82 DVYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD 161 (336)
T ss_pred eEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccc
Confidence 68999999999999998888899999999999999999999999999999999999999999999999999875422110
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-cc
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN-WM 302 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~-~~ 302 (427)
. .+ ......||+.|+|||++.+ ..
T Consensus 162 ~-~~------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 186 (336)
T cd07849 162 H-TG------------------------------------------------------FLTEYVATRWYRAPEIMLNSKG 186 (336)
T ss_pred c-cC------------------------------------------------------CcCCcCcCCCccChHHhhCCCC
Confidence 0 00 0011235566666666543 23
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHh-----------------------hcCcHHHHHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMA-----------------------KISSDSARKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
+...+|+||+|++++.+.++..+|.. .+.......+....+......+....+..++
T Consensus 187 ~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (336)
T cd07849 187 YTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADP 266 (336)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCc
Confidence 44556888888777666443333311 1111111112222222222333344456789
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC-CCCCccccc-CCCCHHHHHHHHhhh
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQSFED-MDLPVDQWKGTYSLE 424 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~ 424 (427)
++.|||.+||+.||.+|||+.|+++||||.++..+..++.. +++..+++. .+++..+++..+..|
T Consensus 267 ~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (336)
T cd07849 267 KALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVAEEPFPFDFELFDDLPKEKLKELIFEE 333 (336)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCcccCCCCCChhhccccccCHHHHHHHHHHH
Confidence 99999999999999999999999999999998877665544 444444542 356677777766655
No 73
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=7.9e-41 Score=326.34 Aligned_cols=253 Identities=20% Similarity=0.286 Sum_probs=192.8
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHH---HhcCCCCCceeeeeeeecCccccC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRM---LKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~---l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
|.+.+.||+|+||.||.+ .+..+|+.||||++.+... .....+.+.+|+++ ++.++||||+++++++...
T Consensus 1 y~i~~~lg~G~~g~Vy~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~----- 74 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLA-EYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE----- 74 (324)
T ss_pred CeEEEEEeecCCEEEEEE-EECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC-----
Confidence 456788999999999964 5667899999999865321 12223445556554 4577899999999988654
Q ss_pred CceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..+|++||++ +++|...+....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 75 -~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 75 -DHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred -CEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 4678999988 77998888878899999999999999999999999999999999999999999999999998763211
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... .....+||+.|+|||++.+
T Consensus 154 ~~~----------------------------------------------------------~~~~~~g~~~y~aPE~~~~ 175 (324)
T cd05589 154 FGD----------------------------------------------------------RTSTFCGTPEFLAPEVLTE 175 (324)
T ss_pred CCC----------------------------------------------------------cccccccCccccCHhHhcC
Confidence 000 1112357777888888777
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC---
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI--- 377 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~--- 377 (427)
..+..++|+||+|++++.|.++..+|................+. .....++++.+||.+||+.||.+|+
T Consensus 176 ~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~--------~p~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 176 TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR--------YPRFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 66777889999999999887776666433222222222222111 1234688999999999999999999
Q ss_pred --CHHHHhcCCCCCCC
Q psy8260 378 --TAEQALAHPYLSQY 391 (427)
Q Consensus 378 --ta~e~L~Hp~f~~~ 391 (427)
+++++++||||...
T Consensus 248 ~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 248 EKDAEDVKKQPFFRDI 263 (324)
T ss_pred CCCHHHHhhCCCcCCC
Confidence 79999999999864
No 74
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-40 Score=332.60 Aligned_cols=296 Identities=23% Similarity=0.293 Sum_probs=203.9
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||+|+||.||+ +.+..+++.||||++..... .......+.+|+.+++.++||||+++++++... .
T Consensus 2 ~f~~~~~LG~G~~g~Vy~-~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~------~ 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCL-ACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK------D 74 (381)
T ss_pred CceEEEEEeecCCEEEEE-EEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC------C
Confidence 467788999999999996 45677899999999865322 223345677899999999999999999998754 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|++||++ |++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 75 NLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 688999988 7899888754 56899999999999999999999999999999999999999999999999998754221
Q ss_pred cc-ccc-ccccc----cchhhhhcccccCCCCcceeeccCCccc--ccccccchhhhhccCCCC-CCccccccccccccc
Q psy8260 222 MT-GYV-ATRWY----RAPEIMLNWMHYNQTGVPFYFQDLKPSN--IAVNEDCELKILDFGLAR-PTENEMTGYVATRWY 292 (427)
Q Consensus 222 ~~-~~~-gt~~y----~aPE~l~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~ki~d~g~~~-~~~~~~~~~~gt~~Y 292 (427)
.. .+. ..... +.|+. +|... |.... ..+-....... .........+||+.|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~gt~~Y 214 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSD------------------LWDDVSNCRCGD--RLKTLEQRATKQHQRCLAHSLVGTPNY 214 (381)
T ss_pred cccccccccccccccccCccc------------------cccccccccccc--ccchhhccccccccccccccccCCccc
Confidence 10 000 00000 11111 11100 00000 00000000000 001122356899999
Q ss_pred cchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 293 RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 293 ~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
+|||++.+..+...+|+||+|++++.|.++..||..........+.......... .....++++++|||.+||..+
T Consensus 215 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~s~~~~dli~~ll~~~ 290 (381)
T cd05626 215 IAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHI----PPQVKLSPEAVDLITKLCCSA 290 (381)
T ss_pred cCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCC----CCCCCCCHHHHHHHHHHccCc
Confidence 9999998888888899999999999887777777543322222222211111100 011247899999999987655
Q ss_pred CC--CCCCHHHHhcCCCCCCC
Q psy8260 373 SE--KRITAEQALAHPYLSQY 391 (427)
Q Consensus 373 P~--~R~ta~e~L~Hp~f~~~ 391 (427)
+. +|+|++|+++||||.+.
T Consensus 291 ~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 291 EERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred ccccCCCCHHHHhcCcccCCC
Confidence 44 49999999999999864
No 75
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.7e-40 Score=322.26 Aligned_cols=294 Identities=50% Similarity=0.862 Sum_probs=220.6
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.+.|.+.+.||.|+||.||. +.+..+|..||||++.+........+.+.+|+.+++.++||||++++++|... .
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 82 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCS-ARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP-----L 82 (328)
T ss_pred ccceEEEEeecccCCeEEEE-EEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-----C
Confidence 45688899999999999996 55777899999998865443334456677999999999999999999987542 2
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 143 KNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
...|+++++++++|.++++...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~ 162 (328)
T cd07856 83 EDIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQM 162 (328)
T ss_pred CcEEEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCc
Confidence 35789999999999999887789999999999999999999999999999999999999999999999999987654444
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
....++..|+|||.+.+.. .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~------------------------------------------------------------~ 182 (328)
T cd07856 163 TGYVSTRYYRAPEIMLTWQ------------------------------------------------------------K 182 (328)
T ss_pred CCCcccccccCceeeeccC------------------------------------------------------------C
Confidence 4455566666666543211 1
Q ss_pred CCCCCCHHHHHHHHHHh-----------------------CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 303 HYNQTDIHQLNLIMEML-----------------------GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~l-----------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
+...+|+|++|++++.+ |.++.++..........++....+...........+..++
T Consensus 183 ~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (328)
T cd07856 183 YDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADP 262 (328)
T ss_pred cCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCH
Confidence 23334566666555444 3333333222222212222222222222333445566789
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCC-CCCCCcccccCCCCHHHHHHHHh
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPT-SPPYDQSFEDMDLPVDQWKGTYS 422 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 422 (427)
++.++|.+||+.||++|+|+++++.||||.....|...+. ...|++++.+.+++++.|+--+.
T Consensus 263 ~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (328)
T cd07856 263 SAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEPVAEEKFDWSFNDADLPVDTWKVMMY 326 (328)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccccCchhhcCCchhcccCCHHHHHHHhc
Confidence 9999999999999999999999999999998877755544 36899999999999999986554
No 76
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.2e-40 Score=330.12 Aligned_cols=290 Identities=18% Similarity=0.245 Sum_probs=201.7
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+|++.+.||+|+||.||. +.+..+++.||||++.+.... ......+.+|+.++.+++||||+++++.+... .
T Consensus 2 ~y~~~~~LG~G~~g~V~~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~------~ 74 (363)
T cd05628 2 DFESLKVIGRGAFGEVRL-VQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK------L 74 (363)
T ss_pred CceEeEEEEeCCCEEEEE-EEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC------C
Confidence 467889999999999996 456778999999998653221 22334567899999999999999999988654 4
Q ss_pred eEEEEeccC-CCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|++||++ |++|.+++. .+.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 75 NLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred eEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 678999988 789988875 457999999999999999999999999999999999999999999999999999754322
Q ss_pred ccc-cc-ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 222 MTG-YV-ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 222 ~~~-~~-gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
... +. ......++..... ........+.|. ........+.+||+.|+|||++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------------------~~~~~~~~~~~Gt~~Y~aPE~~~ 209 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQ------NMNSKRKAETWK-------------------RNRRQLAFSTVGTPDYIAPEVFM 209 (363)
T ss_pred cccccccccccccccccccc------ccccccccchhh-------------------hccccccccccCCccccCHHHHc
Confidence 110 00 0000000000000 000000000000 00011224568999999999999
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC---C
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK---R 376 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~---R 376 (427)
+..+..++|+||+|++++.|.++..||..........+......... +.. ....+++++|||.+||. +|.+ |
T Consensus 210 ~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~p~-~~~~s~~~~~li~~l~~-~~~~r~~r 284 (363)
T cd05628 210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLI---FPP-EVPISEKAKDLILRFCC-EWEHRIGA 284 (363)
T ss_pred CCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCccc---CCC-cCCCCHHHHHHHHHHcC-ChhhcCCC
Confidence 88888899999999999988777666654332222222221111110 000 12368999999999886 5554 5
Q ss_pred CCHHHHhcCCCCCCC
Q psy8260 377 ITAEQALAHPYLSQY 391 (427)
Q Consensus 377 ~ta~e~L~Hp~f~~~ 391 (427)
++++|+++||||...
T Consensus 285 ~~~~ei~~hp~f~~~ 299 (363)
T cd05628 285 PGVEEIKTNPFFEGV 299 (363)
T ss_pred CCHHHHhCCCCCCCC
Confidence 799999999999865
No 77
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=7e-41 Score=326.67 Aligned_cols=249 Identities=21% Similarity=0.326 Sum_probs=191.6
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv 148 (427)
+.||+|+||.||+ +.+..+|+.||+|++..... .......+.+|+++++.++||||++++++|... ..+|++
T Consensus 1 ~~lG~G~~g~Vy~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~------~~~~lv 73 (323)
T cd05595 1 KLLGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH------DRLCFV 73 (323)
T ss_pred CeeeeCCCEEEEE-EEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC------CEEEEE
Confidence 3689999999996 45677899999999865322 222344567899999999999999999988654 467899
Q ss_pred eccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccc
Q psy8260 149 THLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 226 (427)
Q Consensus 149 ~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 226 (427)
||++ +++|...+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 ~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--- 150 (323)
T cd05595 74 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--- 150 (323)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC---
Confidence 9988 6788877754 5689999999999999999999999999999999999999999999999998763211100
Q ss_pred ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCC
Q psy8260 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306 (427)
Q Consensus 227 gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~ 306 (427)
......||+.|+|||++.+..+...
T Consensus 151 -------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~ 175 (323)
T cd05595 151 -------------------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRA 175 (323)
T ss_pred -------------------------------------------------------ccccccCCcCcCCcccccCCCCCch
Confidence 0112346777888887776667778
Q ss_pred CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-----CHHH
Q psy8260 307 TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-----TAEQ 381 (427)
Q Consensus 307 ~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-----ta~e 381 (427)
+|+||+|++++.|.++..+|................. ......++++.+||.+||+.||.+|+ ++.+
T Consensus 176 ~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ 247 (323)
T cd05595 176 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI--------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 247 (323)
T ss_pred hchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHH
Confidence 8999999999988776666643322222222111111 11235689999999999999999998 9999
Q ss_pred HhcCCCCCCC
Q psy8260 382 ALAHPYLSQY 391 (427)
Q Consensus 382 ~L~Hp~f~~~ 391 (427)
+++||||.+.
T Consensus 248 ~l~h~~~~~~ 257 (323)
T cd05595 248 VMEHRFFLSI 257 (323)
T ss_pred HHcCCCcCCC
Confidence 9999999864
No 78
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.6e-40 Score=340.04 Aligned_cols=284 Identities=23% Similarity=0.353 Sum_probs=188.1
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC------CCCceeeeeeeec
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN------HENVIGLLDVFHS 135 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~------HpnIv~l~~~~~~ 135 (427)
..+.|.+.+.||+|+||.||+ +.+..+++.||||++.... .......+|++++..++ |.++++++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~-a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVE-AWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEE-EEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 356799999999999999996 5566789999999986421 22233445666666554 4568888888764
Q ss_pred CccccCCceEEEEeccCCCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCC--------
Q psy8260 136 NTCLADFKNVYMVTHLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDC-------- 205 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~-------- 205 (427)
. ...++++++++|++|.+++. .+.+++..+..++.||+.||+|||+ .|||||||||+|||++.++
T Consensus 203 ~-----~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 E-----TGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred C-----CceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccc
Confidence 3 24688999999998888765 4579999999999999999999998 5999999999999998655
Q ss_pred --------CEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCC
Q psy8260 206 --------ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277 (427)
Q Consensus 206 --------~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~ 277 (427)
.+||+|||++.......+..+||+.|+|||++.+. .|+. ..|+|+.||++.+
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~------~~DiwSlGvil~e------------- 337 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGL-GWMY------STDMWSMGCIIYE------------- 337 (467)
T ss_pred cccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcC-CCCc------HHHHHHHHHHHHH-------------
Confidence 49999999886544444555677777777776542 1221 2256666555544
Q ss_pred CCccccccccccccccchHHhhhccCCCC-CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCC----CCCcccHHh
Q psy8260 278 PTENEMTGYVATRWYRAPEIMLNWMHYNQ-TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP----LLTKKDFRQ 352 (427)
Q Consensus 278 ~~~~~~~~~~gt~~Y~APEvl~~~~~~~~-~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 352 (427)
+++|.. ++.+ .+...+..+...+|..+..+.........+.+..... ....+.+..
T Consensus 338 ----lltG~~---------------pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (467)
T PTZ00284 338 ----LYTGKL---------------LYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLAR 398 (467)
T ss_pred ----HHhCCC---------------CCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHh
Confidence 222211 2222 2333444455555555544433222222222211111 111111111
Q ss_pred hc-------CCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q psy8260 353 VF-------KGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSD 393 (427)
Q Consensus 353 ~~-------~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 393 (427)
.. ...++.+.|||.+||++||.+|+||+|+|+||||.++..
T Consensus 399 ~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 399 IARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred hhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 10 012567889999999999999999999999999987644
No 79
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=3.6e-40 Score=323.42 Aligned_cols=301 Identities=46% Similarity=0.746 Sum_probs=221.6
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||+|+||.||. +.+..+|+.||||.+..............+|+.+++.++||||+++++++..... ....
T Consensus 5 ~~y~~~~~lg~G~~~~vy~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~-~~~~ 82 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCS-AKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR-EAFN 82 (337)
T ss_pred cceeEEEEeccCCCeEEEE-EEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccc-cccC
Confidence 3578888999999999996 4567789999999987544334445567789999999999999999998764321 2224
Q ss_pred eEEEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC-
Q psy8260 144 NVYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE- 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~- 221 (427)
.+|+++++++++|.+++.. ..+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 83 DVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred cEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 5799999999899888754 56899999999999999999999999999999999999999999999999998754321
Q ss_pred --cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 222 --MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 222 --~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.....++..|+|||.+.+.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~----------------------------------------------------------- 183 (337)
T cd07858 163 DFMTEYVVTRWYRAPELLLNC----------------------------------------------------------- 183 (337)
T ss_pred ccccccccccCccChHHHhcC-----------------------------------------------------------
Confidence 1223344455555544321
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHH-----------------------hhcCcHHHHHHHhcCCCCCcccHHhhcCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFM-----------------------AKISSDSARKYINSLPLLTKKDFRQVFKG 356 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (427)
..+..++|+|++|++++.|.++..+|. .........++....+......+....+.
T Consensus 184 -~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (337)
T cd07858 184 -SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPH 262 (337)
T ss_pred -CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHccc
Confidence 123445677777776665533332221 11111222223333333333334445567
Q ss_pred CChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCC-CCCCCcccccCCCCHHHHHHHHhhhcc
Q psy8260 357 ANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPT-SPPYDQSFEDMDLPVDQWKGTYSLESL 426 (427)
Q Consensus 357 ~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (427)
.+++++|||.+||+.||++|||++|+++||||.....+...+. +.++++++++.+....+.+..+..|-|
T Consensus 263 ~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (337)
T cd07858 263 ANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPVCQTPFSFDFEEDALTEEDIKELIYNEML 333 (337)
T ss_pred CCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCccCCCccchhhhhhhcCHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999998877766554 467888899999999998888877654
No 80
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.6e-41 Score=331.84 Aligned_cols=286 Identities=22% Similarity=0.330 Sum_probs=204.4
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||+|+||.||. +.+..+|+.||||++....... .....+.+|+.++..++||||+++++++... .
T Consensus 2 ~y~~~~~lg~G~~g~Vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~ 74 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWL-VRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE------E 74 (350)
T ss_pred CceEEEEEEeCCcEEEEE-EEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC------C
Confidence 577889999999999996 5567789999999986532211 2344567899999999999999999887643 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|++|+++ +++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 75 HLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred eEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 678999988 7899988865 47999999999999999999999999999999999999999999999999998765432
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.....- .+........ . . ..+. .. .............||+.|+|||++.+.
T Consensus 155 ~~~~~~--~~~~~~~~~~------~-------~---~~~~---------~~--~~~~~~~~~~~~~gt~~y~aPE~~~~~ 205 (350)
T cd05573 155 KDREYY--LNDSHNLLFR------D-------N---VLVR---------RR--DHKQRRVRANSTVGTPDYIAPEVLRGT 205 (350)
T ss_pred Cccccc--cccccccccc------c-------c---cccc---------cc--ccccccccccccccCccccCHHHHcCC
Confidence 110000 0000000000 0 0 0000 00 000001122345799999999999988
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC-HH
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT-AE 380 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t-a~ 380 (427)
.+...+|+||+|++++.|.++..||..........+......... . .....+++++.+||.+||+ ||.+|++ ++
T Consensus 206 ~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~---~-p~~~~~~~~~~~li~~ll~-dp~~R~~s~~ 280 (350)
T cd05573 206 PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLR---F-PPDPPVSPEAIDLICRLLC-DPEDRLGSFE 280 (350)
T ss_pred CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCccc---C-CCCCCCCHHHHHHHHHHcc-ChhhcCCCHH
Confidence 888899999999999999777766654332222222222111100 0 0112368999999999998 9999999 99
Q ss_pred HHhcCCCCCCC
Q psy8260 381 QALAHPYLSQY 391 (427)
Q Consensus 381 e~L~Hp~f~~~ 391 (427)
|+++||||.+.
T Consensus 281 ~ll~hp~~~~~ 291 (350)
T cd05573 281 EIKSHPFFKGI 291 (350)
T ss_pred HHhcCCCcCCC
Confidence 99999999865
No 81
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=7.5e-41 Score=332.35 Aligned_cols=262 Identities=21% Similarity=0.288 Sum_probs=195.9
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
+..+.|++.+.||+|+||.||. +.+..+++.||+|.+.+... .......+.+|+.+++.++||||++++++|...
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~--- 115 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQL-VRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD--- 115 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEE-EEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC---
Confidence 3456788999999999999996 55677899999999864322 122334466899999999999999999988654
Q ss_pred cCCceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
..+|+++|++ +++|.+++....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus 116 ---~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 116 ---KYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred ---CEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 4689999988 789999998888999999999999999999999999999999999999999999999999998753
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
...... ...+.+||+.|+|||++
T Consensus 193 ~~~~~~---------------------------------------------------------~~~~~~gt~~Y~aPE~~ 215 (370)
T cd05621 193 DETGMV---------------------------------------------------------RCDTAVGTPDYISPEVL 215 (370)
T ss_pred ccCCce---------------------------------------------------------ecccCCCCcccCCHHHH
Confidence 221000 00122456666666666
Q ss_pred hhcc----CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 299 LNWM----HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 299 ~~~~----~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
.+.. +...+|+||+|++++.|.++..||..........+......... +. ....+++.+++||.+||+.+|.
T Consensus 216 ~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~p-~~~~~s~~~~~li~~~L~~~~~ 291 (370)
T cd05621 216 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN---FP-EDVEISKHAKNLICAFLTDREV 291 (370)
T ss_pred hccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC---CC-CcccCCHHHHHHHHHHccCchh
Confidence 5432 45678999999999988777666654332222222222111111 00 0124688999999999986655
Q ss_pred C--CCCHHHHhcCCCCCC
Q psy8260 375 K--RITAEQALAHPYLSQ 390 (427)
Q Consensus 375 ~--R~ta~e~L~Hp~f~~ 390 (427)
+ |+|++|+++||||..
T Consensus 292 r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 292 RLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred ccCCCCHHHHhcCcccCC
Confidence 4 899999999999986
No 82
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=6.8e-41 Score=333.59 Aligned_cols=303 Identities=22% Similarity=0.265 Sum_probs=203.2
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||.|+||.||. +.+..+|+.||||++.+... .......+.+|+++++.++|||||+++++|... .
T Consensus 2 ~y~~~~~lG~G~~g~Vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------~ 74 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRL-VQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA------Q 74 (377)
T ss_pred CceEeEEEeecCCEEEEE-EEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Confidence 467889999999999995 55677899999998864321 122345567899999999999999999998754 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|+++|++ |++|.+++.. ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 75 YLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 689999988 7899888754 56899999999999999999999999999999999999999999999999999744321
Q ss_pred cccccccccccchhhhhcccccCC-CCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQ-TGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... ..|..... +...... ........+- .+ .......++.+++..... .....+||+.|+|||++.+
T Consensus 155 ~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~ 222 (377)
T cd05629 155 HDS----AYYQKLLQ--GKSNKNRIDNRNSVAVDS--IN--LTMSSKDQIATWKKNRRL--MAYSTVGTPDYIAPEIFLQ 222 (377)
T ss_pred ccc----cccccccc--cccccccccccccccccc--cc--ccccchhhhhhhhhcccc--cccccCCCccccCHHHHcc
Confidence 100 00000000 0000000 0000000000 00 000000111222211111 1124679999999999988
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC---C
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR---I 377 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R---~ 377 (427)
..+..++|+||+|++++.|.++..+|......+............. +. ....++++++|||.+||+ +|.+| +
T Consensus 223 ~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---~p-~~~~~s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 223 QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLY---FP-DDIHLSVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccC---CC-CCCCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence 8888889999999999988777666643322222222221111110 00 012468899999999998 77775 5
Q ss_pred CHHHHhcCCCCCCC
Q psy8260 378 TAEQALAHPYLSQY 391 (427)
Q Consensus 378 ta~e~L~Hp~f~~~ 391 (427)
|++|+++||||...
T Consensus 298 ~~~~~l~hp~~~~~ 311 (377)
T cd05629 298 GAHEIKSHPFFRGV 311 (377)
T ss_pred CHHHHhcCCCcCCC
Confidence 99999999999854
No 83
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9.1e-41 Score=326.04 Aligned_cols=249 Identities=23% Similarity=0.333 Sum_probs=190.6
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv 148 (427)
+.||+|+||.||. +.+..+|+.||+|.+.+... .........+|+++++.++||||++++++|... ..+|++
T Consensus 1 ~~lG~G~~g~V~~-~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~------~~~~lv 73 (325)
T cd05594 1 KLLGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH------DRLCFV 73 (325)
T ss_pred CeeeeCCCEEEEE-EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC------CEEEEE
Confidence 3689999999995 55677899999999875422 222345567899999999999999999888654 467899
Q ss_pred eccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 149 THLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 149 ~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
||++ +++|...+.. ..+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 ~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-- 151 (325)
T cd05594 74 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-- 151 (325)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--
Confidence 9988 6788877754 568999999999999999999997 7999999999999999999999999999863211100
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
......||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (325)
T cd05594 152 --------------------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGR 175 (325)
T ss_pred --------------------------------------------------------ccccccCCcccCCHHHHccCCCCC
Confidence 011234677788888777766777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-----CHH
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-----TAE 380 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-----ta~ 380 (427)
++|+||+|++++.|.++..||................. ......++++.+||.+||++||++|+ +++
T Consensus 176 ~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~--------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~ 247 (325)
T cd05594 176 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAK 247 (325)
T ss_pred ccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC--------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHH
Confidence 88999999999888777666643322111111111111 11235689999999999999999997 999
Q ss_pred HHhcCCCCCCC
Q psy8260 381 QALAHPYLSQY 391 (427)
Q Consensus 381 e~L~Hp~f~~~ 391 (427)
|+++||||.+.
T Consensus 248 ~il~h~~~~~~ 258 (325)
T cd05594 248 EIMQHKFFAGI 258 (325)
T ss_pred HHhcCCCcCCC
Confidence 99999999864
No 84
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.5e-40 Score=323.83 Aligned_cols=250 Identities=22% Similarity=0.339 Sum_probs=190.9
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+ .+..+++.||||++.+... .........+|+.++..+ +||||++++++|... ..+|+
T Consensus 1 ~~lg~G~~g~V~~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~------~~~~i 73 (320)
T cd05590 1 RVLGKGSFGKVMLA-RLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP------DRLFF 73 (320)
T ss_pred CeeeeCCCeEEEEE-EEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC------CEEEE
Confidence 36899999999964 5677899999999865321 122344567888888776 799999999988654 46789
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+||++ +++|...+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~-- 151 (320)
T cd05590 74 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK-- 151 (320)
T ss_pred EEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC--
Confidence 99988 6799887754 5799999999999999999999999999999999999999999999999999763211000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
......||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (320)
T cd05590 152 --------------------------------------------------------TTSTFCGTPDYIAPEILQEMLYGP 175 (320)
T ss_pred --------------------------------------------------------cccccccCccccCHHHHcCCCCCC
Confidence 111235778888888887777777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH------
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA------ 379 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta------ 379 (427)
.+|+||+|++++.|.++..||.................. .....++++++||++||+.||.+|+|+
T Consensus 176 ~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~ 247 (320)
T cd05590 176 SVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV--------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGE 247 (320)
T ss_pred ccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCC--------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCH
Confidence 889999999999887666666433222222222211111 123468899999999999999999998
Q ss_pred HHHhcCCCCCCCC
Q psy8260 380 EQALAHPYLSQYS 392 (427)
Q Consensus 380 ~e~L~Hp~f~~~~ 392 (427)
+++++||||....
T Consensus 248 ~~~~~h~~f~~~~ 260 (320)
T cd05590 248 EAILRHPFFKELD 260 (320)
T ss_pred HHHHcCCCcCCCC
Confidence 9999999998653
No 85
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.1e-40 Score=319.85 Aligned_cols=260 Identities=30% Similarity=0.484 Sum_probs=186.0
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||+|+||.||.+ .+..++..||+|++..... ......+.+|+++++.++||||+++++++... .
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~-~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~ 77 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKG-RSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTD------K 77 (309)
T ss_pred CceEEEEEecccCCEEEEEE-EecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeC------C
Confidence 45788899999999999964 5667889999999864322 22233466899999999999999999998654 4
Q ss_pred eEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..++++++++++|.+.+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 78 SLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred eEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 5799999998888887754 34889999999999999999999999999999999999999999999999998753221
Q ss_pred ---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 222 ---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 222 ---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
.....+|..|+|||++.+..
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~--------------------------------------------------------- 180 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSS--------------------------------------------------------- 180 (309)
T ss_pred ccccccccccccccCCHHHhCCC---------------------------------------------------------
Confidence 12234455555555543321
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHH-----------------------HhhcCcHHHHHHHhcCCCCCcccHHhhcC
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEF-----------------------MAKISSDSARKYINSLPLLTKKDFRQVFK 355 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (427)
.+...+|+||+|++++.|.++..+| +.......... ....+......+.....
T Consensus 181 ---~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 256 (309)
T cd07872 181 ---EYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK-NYNFPKYKPQPLINHAP 256 (309)
T ss_pred ---CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh-hhhcCccCCCchhhhcc
Confidence 1233446666666555553333322 22211110000 00111122222233445
Q ss_pred CCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q psy8260 356 GANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYS 392 (427)
Q Consensus 356 ~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 392 (427)
.++++++|||.+||++||.+|+|++|+|+||||+...
T Consensus 257 ~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 257 RLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred CCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 6789999999999999999999999999999998754
No 86
>KOG0986|consensus
Probab=100.00 E-value=1.2e-41 Score=324.07 Aligned_cols=262 Identities=21% Similarity=0.310 Sum_probs=207.5
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHH-HHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVH-AKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~-~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
.+..+.|..-++||+|+||.|+ ++.-+.||+.+|.|++.+....... ..-.++|-++|.+++.+.||.|-..|++.
T Consensus 181 pvt~n~F~~~RvlGkGGFGEV~-acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk-- 257 (591)
T KOG0986|consen 181 PVTKNTFRVYRVLGKGGFGEVC-ACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK-- 257 (591)
T ss_pred hccccceeeeEEEeccccccee-EEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC--
Confidence 3455678888999999999999 6677789999999988654332222 23356899999999999999998888775
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGl 214 (427)
..+++|+.+| ||||.-.+.+ ..|++..++.|+.+|+.||++||+.+||.|||||+|||+|+.|+++|+|+||
T Consensus 258 ----d~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGL 333 (591)
T KOG0986|consen 258 ----DALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGL 333 (591)
T ss_pred ----CceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccce
Confidence 3578888888 7898765532 3799999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
|..+... ....+++||.+|||
T Consensus 334 Avei~~g-----------------------------------------------------------~~~~~rvGT~GYMA 354 (591)
T KOG0986|consen 334 AVEIPEG-----------------------------------------------------------KPIRGRVGTVGYMA 354 (591)
T ss_pred EEecCCC-----------------------------------------------------------CccccccCcccccC
Confidence 8643221 13456789999999
Q ss_pred hHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc---HHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCC
Q psy8260 295 PEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS---DSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLEL 371 (427)
Q Consensus 295 PEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~ 371 (427)
|||+.+..|....|||+|||++|.|..+..||...-.+ ++........ ..++....|++|++|.+.+|++
T Consensus 355 PEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~-------~~ey~~kFS~eakslc~~LL~K 427 (591)
T KOG0986|consen 355 PEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED-------PEEYSDKFSEEAKSLCEGLLTK 427 (591)
T ss_pred HHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc-------hhhcccccCHHHHHHHHHHHcc
Confidence 99998888888899999999999998777777543222 1221111111 1223355799999999999999
Q ss_pred CCCCCC-----CHHHHhcCCCCCCCCCC
Q psy8260 372 DSEKRI-----TAEQALAHPYLSQYSDP 394 (427)
Q Consensus 372 dP~~R~-----ta~e~L~Hp~f~~~~~~ 394 (427)
||++|+ +++++.+||||+.+...
T Consensus 428 dp~~RLGcrg~ga~evk~HpfFk~lnw~ 455 (591)
T KOG0986|consen 428 DPEKRLGCRGEGAQEVKEHPFFKDLNWR 455 (591)
T ss_pred CHHHhccCCCcCcchhhhCcccccCCHh
Confidence 999998 67899999999976543
No 87
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-40 Score=332.32 Aligned_cols=300 Identities=23% Similarity=0.299 Sum_probs=203.5
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||+|+||.||+ +.+..+++.||||++.+... .......+.+|+.+++.++|||||++++.|... .
T Consensus 2 ~f~~~~~LG~G~~g~Vy~-a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~------~ 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCL-ARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK------D 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEE-EEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC------C
Confidence 467788999999999996 55777899999999865322 123345577899999999999999999998754 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|++||++ +++|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 75 NLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 689999988 7799888754 56899999999999999999999999999999999999999999999999998643211
Q ss_pred cc-cccccccccchhhhhcccccCCCCcceeeccCCcc--cccccccchhhhhccCCCC-CCccccccccccccccchHH
Q psy8260 222 MT-GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPS--NIAVNEDCELKILDFGLAR-PTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 222 ~~-~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~ki~d~g~~~-~~~~~~~~~~gt~~Y~APEv 297 (427)
.. .+..+.....++ ... +...|.. .|..... .......... .......+.+||+.|+|||+
T Consensus 155 ~~~~~~~~~~~~~~~-----------~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 219 (382)
T cd05625 155 HDSKYYQSGDHVRQD-----------SMD--FSNEWGDPANCRCGDR--LKPLERRAARQHQRCLAHSLVGTPNYIAPEV 219 (382)
T ss_pred ccccccccccccccc-----------ccc--cccccccccccccccc--ccchhhhhccccccccccccccCcccCCHHH
Confidence 00 000000000000 000 0000000 0000000 0000000000 00112235689999999999
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
+.+..+...+|+||+|++++.|.++..||..........+.......... .....++++++|||.+|+ .||.+|+
T Consensus 220 ~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~----p~~~~~s~~~~~li~~l~-~~p~~R~ 294 (382)
T cd05625 220 LLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHI----PPQAKLSPEASDLIIKLC-RGPEDRL 294 (382)
T ss_pred hcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCC----CCcccCCHHHHHHHHHHc-cCHhHcC
Confidence 99888888899999999999887766666543222222222211111100 012357899999999987 4999999
Q ss_pred C---HHHHhcCCCCCCC
Q psy8260 378 T---AEQALAHPYLSQY 391 (427)
Q Consensus 378 t---a~e~L~Hp~f~~~ 391 (427)
+ ++|+++||||...
T Consensus 295 ~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 295 GKNGADEIKAHPFFKTI 311 (382)
T ss_pred CCCCHHHHhcCCCcCCc
Confidence 7 9999999999864
No 88
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.2e-40 Score=325.78 Aligned_cols=260 Identities=21% Similarity=0.295 Sum_probs=192.5
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||+|+||.||. +.+..+|+.||||++..... .......+.+|+.+++.++||||+++++++... .
T Consensus 2 ~y~~~~~lg~G~~g~Vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~------~ 74 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQV-VREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK------D 74 (330)
T ss_pred CceEEEEEEeccCEEEEE-EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC------C
Confidence 477889999999999996 45677899999999875432 222344567899999999999999999887643 4
Q ss_pred eEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.+|++++++ +++|.++++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 75 NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 678999988 7899998865 4699999999999999999999999999999999999999999999999999875432
Q ss_pred Cc----ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 221 EM----TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 221 ~~----~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
.. ....||+.|+|||++......
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~----------------------------------------------------- 181 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGD----------------------------------------------------- 181 (330)
T ss_pred CCceeeecccCCccccCHHHhcccccc-----------------------------------------------------
Confidence 11 112345555555554321000
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
....+..++|+||+|++++.|.++..||..........+......... +. ....+++++.+||.+||+ ||++|
T Consensus 182 --~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~---~~-~~~~~~~~~~~li~~ll~-~p~~R 254 (330)
T cd05601 182 --GKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK---FP-EDPKVSSDFLDLIQSLLC-GQKER 254 (330)
T ss_pred --ccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC---CC-CCCCCCHHHHHHHHHHcc-ChhhC
Confidence 012345678999999999888777766644332222222221111000 00 112468899999999998 99999
Q ss_pred CCHHHHhcCCCCCCC
Q psy8260 377 ITAEQALAHPYLSQY 391 (427)
Q Consensus 377 ~ta~e~L~Hp~f~~~ 391 (427)
+|++++++||||...
T Consensus 255 ~t~~~l~~h~~~~~~ 269 (330)
T cd05601 255 LGYEGLCCHPFFSKI 269 (330)
T ss_pred CCHHHHhCCCCcCCC
Confidence 999999999999864
No 89
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.9e-40 Score=314.72 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=188.7
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEec
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e 150 (427)
||+|+||.||. +.+..+|+.||+|++...... ....+.+..|+++++.++||||+++.++|... ..+|++|+
T Consensus 1 lg~G~~g~Vy~-~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------~~~~lv~e 73 (280)
T cd05608 1 LGKGGFGEVSA-CQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK------TDLCLVMT 73 (280)
T ss_pred CCCCCceeEEE-EEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC------CeEEEEEe
Confidence 68999999995 456778999999998653222 12234567899999999999999999887653 45788998
Q ss_pred cC-CCCHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccc
Q psy8260 151 LM-GADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224 (427)
Q Consensus 151 ~~-g~~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 224 (427)
++ +++|...+. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 74 ~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~- 152 (280)
T cd05608 74 IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS- 152 (280)
T ss_pred CCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-
Confidence 87 788987663 24589999999999999999999999999999999999999999999999998864321100
Q ss_pred ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCC
Q psy8260 225 YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHY 304 (427)
Q Consensus 225 ~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~ 304 (427)
...+..||+.|+|||++.+..+.
T Consensus 153 ---------------------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~ 175 (280)
T cd05608 153 ---------------------------------------------------------KTKGYAGTPGFMAPELLQGEEYD 175 (280)
T ss_pred ---------------------------------------------------------cccccCCCcCccCHHHhcCCCCC
Confidence 01123477788888888777777
Q ss_pred CCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-----CH
Q psy8260 305 NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-----TA 379 (427)
Q Consensus 305 ~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-----ta 379 (427)
.++|+||+|++++.+.++..+|................... . .......++++.+|+.+||+.||++|+ |+
T Consensus 176 ~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ 251 (280)
T cd05608 176 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND-S---VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNC 251 (280)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc-C---CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCH
Confidence 78899999999988866655554321111111111111000 0 012234788999999999999999999 89
Q ss_pred HHHhcCCCCCCCC
Q psy8260 380 EQALAHPYLSQYS 392 (427)
Q Consensus 380 ~e~L~Hp~f~~~~ 392 (427)
+|+++||||++..
T Consensus 252 ~~~l~h~~~~~~~ 264 (280)
T cd05608 252 DGLRTHPLFRDLN 264 (280)
T ss_pred HHHhcChhhhcCC
Confidence 9999999998753
No 90
>KOG0201|consensus
Probab=100.00 E-value=3.4e-42 Score=327.45 Aligned_cols=253 Identities=20% Similarity=0.350 Sum_probs=201.4
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|...+.||+|+||.||+ +.+..+++.||+|++..... ....+.+.+|+.+|.+++++||.++|+.|-.+ ..
T Consensus 14 ~~~~~~~IgrGsfG~Vyk-~~d~~t~k~vAiKii~Le~~-~deIediqqei~~Ls~~~~~~it~yygsyl~g------~~ 85 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYK-AIDNKTKKVVAIKIIDLEEA-EDEIEDIQQEISVLSQCDSPNITEYYGSYLKG------TK 85 (467)
T ss_pred ccccchhccccccceeee-eeeccccceEEEEEechhhc-chhhHHHHHHHHHHHhcCcchHHhhhhheeec------cc
Confidence 344458899999999996 56788999999999975432 33346678999999999999999999887644 34
Q ss_pred EEEEeccC-CCCHHHHHhhCCC-CHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 145 VYMVTHLM-GADLNNILRTQKL-SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~~~l-~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
+.++||++ ||++.++++.+.+ .+..+..++++++.||.|||.++.||||||+.|||+..+|.+|++|||++....+..
T Consensus 86 LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 67889888 7899999987765 899999999999999999999999999999999999999999999999986543221
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
....+++|||+||||||+....
T Consensus 166 ----------------------------------------------------------~rr~tfvGTPfwMAPEVI~~~~ 187 (467)
T KOG0201|consen 166 ----------------------------------------------------------KRRKTFVGTPFWMAPEVIKQSG 187 (467)
T ss_pred ----------------------------------------------------------hccccccccccccchhhhcccc
Confidence 0224678888888888888878
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
|..+.||||||+..++|.++.+|+.+-.. ..++...|.-.+ ...-...|+.+++|+..||.+||+.||||.++
T Consensus 188 Y~~KADIWSLGITaiEla~GePP~s~~hP----mrvlflIpk~~P---P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~L 260 (467)
T KOG0201|consen 188 YDTKADIWSLGITAIELAKGEPPHSKLHP----MRVLFLIPKSAP---PRLDGDFSPPFKEFVEACLDKNPEFRPSAKEL 260 (467)
T ss_pred ccchhhhhhhhHHHHHHhcCCCCCcccCc----ceEEEeccCCCC---CccccccCHHHHHHHHHHhhcCcccCcCHHHH
Confidence 99999999999999999666665543211 112222222222 22223568899999999999999999999999
Q ss_pred hcCCCCCC
Q psy8260 383 LAHPYLSQ 390 (427)
Q Consensus 383 L~Hp~f~~ 390 (427)
|+|+|++.
T Consensus 261 LKh~FIk~ 268 (467)
T KOG0201|consen 261 LKHKFIKR 268 (467)
T ss_pred hhhHHHHh
Confidence 99999986
No 91
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.2e-40 Score=323.03 Aligned_cols=255 Identities=23% Similarity=0.352 Sum_probs=190.7
Q ss_pred eeeccccCcccccEEEEeEE--eCcCCcEEEEEEccCcCC--CHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcccc
Q psy8260 66 IDIGPTLSKESFDLIFSSAL--DSVSGVKVAIKKIARPFQ--SAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~--~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~ 140 (427)
|.+.+.||+|+||.||.+.. +..+|+.||+|++.+... .....+...+|+.+++.+ +||||++++++|...
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~---- 77 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE---- 77 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC----
Confidence 67889999999999996543 345789999999864321 122344567899999999 589999999888654
Q ss_pred CCceEEEEeccC-CCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
..++++++++ +++|.+.+. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 78 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 78 --AKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred --CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 4578899988 678988775 456999999999999999999999999999999999999999999999999998643
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
...... .....+||+.|+|||++
T Consensus 156 ~~~~~~---------------------------------------------------------~~~~~~gt~~y~aPE~~ 178 (332)
T cd05614 156 LSEEKE---------------------------------------------------------RTYSFCGTIEYMAPEII 178 (332)
T ss_pred cccCCC---------------------------------------------------------ccccccCCccccCHHHh
Confidence 211000 01123467777777777
Q ss_pred hhcc-CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcH---HH-HHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 299 LNWM-HYNQTDIHQLNLIMEMLGTPPAEFMAKISSD---SA-RKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 299 ~~~~-~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
.+.. +...+|+||+|++++.|.++..+|....... .. .......+ .....+++.+.+||.+||+.||
T Consensus 179 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~dp 250 (332)
T cd05614 179 RGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP--------PFPSFIGPEAQDLLHKLLRKDP 250 (332)
T ss_pred cCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC--------CCCCCCCHHHHHHHHHHcCCCH
Confidence 6543 5567899999999998877666653211111 11 11111111 1123468899999999999999
Q ss_pred CCCC-----CHHHHhcCCCCCCC
Q psy8260 374 EKRI-----TAEQALAHPYLSQY 391 (427)
Q Consensus 374 ~~R~-----ta~e~L~Hp~f~~~ 391 (427)
++|+ +++|+++||||...
T Consensus 251 ~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 251 KKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred HHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999 88999999999864
No 92
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.9e-40 Score=321.16 Aligned_cols=262 Identities=21% Similarity=0.324 Sum_probs=194.6
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
+..+.|++.+.||+|+||.||. +.+..+|..||+|.+.... ......++.+|+++|++++||||+++++++...
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~-~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 75 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTK-VQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD---- 75 (331)
T ss_pred CCcccceEEEeecCCCCEEEEE-EEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC----
Confidence 4456788999999999999996 4567789999999886532 334456688999999999999999999988653
Q ss_pred CCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~-~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
..++++++++ +++|.+++.. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 76 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 153 (331)
T cd06649 76 --GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (331)
T ss_pred --CEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccc
Confidence 4578999888 6799998865 5689999999999999999999986 699999999999999999999999999864
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
..... .....||+.|+|||+
T Consensus 154 ~~~~~------------------------------------------------------------~~~~~g~~~y~aPE~ 173 (331)
T cd06649 154 LIDSM------------------------------------------------------------ANSFVGTRSYMSPER 173 (331)
T ss_pred ccccc------------------------------------------------------------cccCCCCcCcCCHhH
Confidence 32110 012246667777777
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcC---------------CC-------------CCcc-
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSL---------------PL-------------LTKK- 348 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~---------------~~-------------~~~~- 348 (427)
+.+..+..++|+||+|++++.+.++..||...... ......... +. ....
T Consensus 174 ~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
T cd06649 174 LQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK-ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMA 252 (331)
T ss_pred hcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhcccccccccCCccccCcccccccccccccccccccchh
Confidence 76666777789999999998886555544221110 000000000 00 0000
Q ss_pred --cHH---------h-hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 349 --DFR---------Q-VFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 349 --~~~---------~-~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
... . .....++++++||.+||++||++|||++|+|+||||...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 253 IFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred HHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 000 0 011357899999999999999999999999999999764
No 93
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4e-40 Score=321.30 Aligned_cols=250 Identities=25% Similarity=0.381 Sum_probs=189.9
Q ss_pred cccCcccccEEEEeEE--eCcCCcEEEEEEccCcCC--CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 70 PTLSKESFDLIFSSAL--DSVSGVKVAIKKIARPFQ--SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~--~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
+.||+|+||.||.+.. +..+++.||||.+.+... .......+.+|+.+|+.++||||++++++|..+ ..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------~~~ 75 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG------GKL 75 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC------CeE
Confidence 5789999999997543 235789999999865321 122334567899999999999999999988654 457
Q ss_pred EEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 146 YMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
|++|+++ +++|.+.+.. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 76 YLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred EEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 8999987 6789888754 5588999999999999999999999999999999999999999999999999863211100
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
......||+.|+|||++.+..+
T Consensus 156 ----------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~ 177 (323)
T cd05584 156 ----------------------------------------------------------VTHTFCGTIEYMAPEILMRSGH 177 (323)
T ss_pred ----------------------------------------------------------cccccCCCccccChhhccCCCC
Confidence 0112346777777777776667
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-----C
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-----T 378 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-----t 378 (427)
..++|+||+|++++.|.++..+|................. ......++++.|||.+||+.||++|+ +
T Consensus 178 ~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 249 (323)
T cd05584 178 GKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL--------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGD 249 (323)
T ss_pred CCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCC
Confidence 7788999999999988777666643322222222221111 12234688999999999999999999 8
Q ss_pred HHHHhcCCCCCCC
Q psy8260 379 AEQALAHPYLSQY 391 (427)
Q Consensus 379 a~e~L~Hp~f~~~ 391 (427)
++++++||||...
T Consensus 250 ~~~l~~h~~~~~~ 262 (323)
T cd05584 250 AAEVQSHPFFRHV 262 (323)
T ss_pred HHHHhcCCCcCCC
Confidence 9999999999754
No 94
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.9e-40 Score=320.32 Aligned_cols=249 Identities=22% Similarity=0.302 Sum_probs=190.4
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+ .+..+++.||||++.+... ..........|.+++..+ +||||++++++|... ..+|+
T Consensus 1 ~~lG~G~~g~Vy~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~------~~~~l 73 (321)
T cd05591 1 KVLGKGSFGKVMLA-ELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK------DRLFF 73 (321)
T ss_pred CccccCCCeEEEEE-EECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC------CeEEE
Confidence 36899999999965 4667899999999865322 222344566888888865 899999999998754 45789
Q ss_pred EeccC-CCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+||++ +++|...+. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 74 v~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--- 150 (321)
T cd05591 74 VMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--- 150 (321)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC---
Confidence 99988 678887764 4578999999999999999999999999999999999999999999999999886321100
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.......||+.|+|||++.+..+..
T Consensus 151 -------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 175 (321)
T cd05591 151 -------------------------------------------------------VTTTTFCGTPDYIAPEILQELEYGP 175 (321)
T ss_pred -------------------------------------------------------ccccccccCccccCHHHHcCCCCCC
Confidence 0111235778888888887777788
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-------C
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-------T 378 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-------t 378 (427)
++|+||+|++++.|.++..||.................. .....++++.+||.+||+.||++|+ +
T Consensus 176 ~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~--------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~ 247 (321)
T cd05591 176 SVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL--------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGG 247 (321)
T ss_pred ccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC--------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCC
Confidence 899999999999887666666433222222222211111 1123678999999999999999999 9
Q ss_pred HHHHhcCCCCCCC
Q psy8260 379 AEQALAHPYLSQY 391 (427)
Q Consensus 379 a~e~L~Hp~f~~~ 391 (427)
++++++||||...
T Consensus 248 ~~~~~~hp~~~~~ 260 (321)
T cd05591 248 EDAIKQHPFFKEI 260 (321)
T ss_pred HHHHhcCCccCCC
Confidence 9999999999764
No 95
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.8e-40 Score=330.44 Aligned_cols=299 Identities=22% Similarity=0.275 Sum_probs=201.9
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||+|+||.||. +.+..+++.||||++.+... .......+.+|+.+|+.++||||+++++.|... .
T Consensus 2 ~y~~~~~lG~G~~g~V~~-a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------~ 74 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCL-VRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK------D 74 (376)
T ss_pred CceEEEEEEeCCCeEEEE-EEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Confidence 578889999999999996 55677899999999864321 112234567899999999999999999998754 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|++||++ +++|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|......
T Consensus 75 ~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 75 NLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 688999988 7899998865 45899999999999999999999999999999999999999999999999998643211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCC-CCCccccccccccccccchHHhhh
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLA-RPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~-~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... .|..+..... ... ......+.... .+..+....... ........+.+||+.|||||++.+
T Consensus 155 ~~~-----~~~~~~~~~~-----~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 218 (376)
T cd05598 155 HDS-----KYYQKGDHHR-----QDS--MEPSEEWSEID----RCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR 218 (376)
T ss_pred ccc-----cccccccccc-----ccc--ccccccccccc----cccccchhhhhhhhcccccccccCCCccccCHHHHcC
Confidence 000 0000000000 000 00000000000 000000000000 000011235689999999999998
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC---
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI--- 377 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~--- 377 (427)
..+..++|+||+|++++.|.++..||......+.............. .....+++++.+||.+|+ .||.+|+
T Consensus 219 ~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~s~~~~~li~~l~-~~p~~R~~~~ 293 (376)
T cd05598 219 TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHI----PSQAKLSREASDLILRLC-CGAEDRLGKN 293 (376)
T ss_pred CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccC----CCCCCCCHHHHHHHHHHh-cCHhhcCCCC
Confidence 88888899999999998887766666443222222222111111100 112346899999999987 5999999
Q ss_pred CHHHHhcCCCCCCC
Q psy8260 378 TAEQALAHPYLSQY 391 (427)
Q Consensus 378 ta~e~L~Hp~f~~~ 391 (427)
|++|+++||||...
T Consensus 294 t~~ell~h~~~~~~ 307 (376)
T cd05598 294 GADEIKAHPFFKGI 307 (376)
T ss_pred CHHHHhCCCCcCCC
Confidence 99999999999864
No 96
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.3e-40 Score=319.48 Aligned_cols=249 Identities=22% Similarity=0.317 Sum_probs=188.7
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhc-CCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKH-MNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+ .+..+|+.||+|++.+.... .........|..++.. .+||||++++++|... ..+|+
T Consensus 1 ~~lg~G~~g~V~~~-~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~------~~~~l 73 (316)
T cd05620 1 KVLGKGSFGKVLLA-ELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK------EHLFF 73 (316)
T ss_pred CeeeeCCCeEEEEE-EECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC------CEEEE
Confidence 36899999999964 56678999999998653211 1223445678888775 4899999999998654 46899
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+||++ +++|...+.. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 74 v~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 150 (316)
T cd05620 74 VMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--- 150 (316)
T ss_pred EECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC---
Confidence 99988 6789877754 578999999999999999999999999999999999999999999999999876311000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
......+||+.|+|||++.+..+..
T Consensus 151 -------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 175 (316)
T cd05620 151 -------------------------------------------------------NRASTFCGTPDYIAPEILQGLKYTF 175 (316)
T ss_pred -------------------------------------------------------CceeccCCCcCccCHHHHcCCCCCc
Confidence 0112335778888888887777778
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH-HHHhc
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA-EQALA 384 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta-~e~L~ 384 (427)
.+|+||+|++++.|.++..||................+. .....++++++||.+||+.||.+|+|+ +++++
T Consensus 176 ~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 176 SVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPH--------YPRWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred ccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 899999999998887666666433222222221111111 122468899999999999999999997 58999
Q ss_pred CCCCCCC
Q psy8260 385 HPYLSQY 391 (427)
Q Consensus 385 Hp~f~~~ 391 (427)
||||...
T Consensus 248 h~~f~~~ 254 (316)
T cd05620 248 HPFFKTI 254 (316)
T ss_pred CCCcCCC
Confidence 9999865
No 97
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.4e-40 Score=326.60 Aligned_cols=291 Identities=22% Similarity=0.311 Sum_probs=203.3
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|++.+.||+|+||.||. +.+..+++.||||++..... .......+.+|+.++..++||||+++++.|... .
T Consensus 2 ~f~~~~~lG~G~~g~V~~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~------~ 74 (360)
T cd05627 2 DFESLKVIGRGAFGEVRL-VQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK------R 74 (360)
T ss_pred CceEEEEEeeCCCEEEEE-EEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------C
Confidence 467788999999999996 45667899999999864321 122345567899999999999999999988654 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|++||++ |++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 75 NLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 679999988 7899988754 56999999999999999999999999999999999999999999999999998754322
Q ss_pred ccc-ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 222 MTG-YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 222 ~~~-~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... .........|... ....+-.. .+... ..........+.+||+.|+|||++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~---------~~~~~--~~~~~~~~~~~~~gt~~Y~APE~~~~ 210 (360)
T cd05627 155 HRTEFYRNLTHNPPSDF-------------SFQNMNSK---------RKAET--WKKNRRQLAYSTVGTPDYIAPEVFMQ 210 (360)
T ss_pred cccccccccccCCcccc-------------cccccccc---------ccccc--ccccccccccccCCCccccCHHHHcC
Confidence 111 0000000011000 00000000 00000 00000112235689999999999998
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC---
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI--- 377 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~--- 377 (427)
..+...+|+||+|++++.|.++..||..........+........ .+.. ....+++++|||.+|+. ||.+|+
T Consensus 211 ~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~---~~p~-~~~~s~~~~~li~~l~~-~p~~R~~~~ 285 (360)
T cd05627 211 TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETL---VFPP-EVPISEKAKDLILRFCT-DSENRIGSN 285 (360)
T ss_pred CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCce---ecCC-CCCCCHHHHHHHHHhcc-ChhhcCCCC
Confidence 888889999999999998877766665433222222222111111 0110 12368899999999885 999999
Q ss_pred CHHHHhcCCCCCCC
Q psy8260 378 TAEQALAHPYLSQY 391 (427)
Q Consensus 378 ta~e~L~Hp~f~~~ 391 (427)
+++|+++||||...
T Consensus 286 ~~~ei~~hp~f~~~ 299 (360)
T cd05627 286 GVEEIKSHPFFEGV 299 (360)
T ss_pred CHHHHhcCCCCCCC
Confidence 48999999999875
No 98
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=7.1e-40 Score=319.63 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=193.3
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCC-CceeeeeeeecCccccCCc
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHE-NVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~Hp-nIv~l~~~~~~~~~~~~~~ 143 (427)
|.+.+.||+|+||.||.+ .+..+++.||||++.+... .....+.+.+|++++..++|+ +|+.++++|... .
T Consensus 2 y~~~~~lg~G~~g~Vy~~-~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~------~ 74 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLA-ERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM------D 74 (324)
T ss_pred ceEEEEEeeccCeEEEEE-EECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC------C
Confidence 677889999999999965 4667889999999865322 223345577899999999775 578888887643 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|++||++ +++|...+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 75 RLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 689999988 7899887754 56899999999999999999999999999999999999999999999999987532110
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. .....+||+.|+|||++.+.
T Consensus 155 ~~----------------------------------------------------------~~~~~~gt~~y~aPE~~~~~ 176 (324)
T cd05587 155 GK----------------------------------------------------------TTRTFCGTPDYIAPEIIAYQ 176 (324)
T ss_pred CC----------------------------------------------------------ceeeecCCccccChhhhcCC
Confidence 00 01123577888888888777
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH--
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA-- 379 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta-- 379 (427)
.+...+|+||+|++++.|.++..+|................. ......++++++||.+||+.||.+|+++
T Consensus 177 ~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 248 (324)
T cd05587 177 PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--------SYPKSLSKEAVSICKGLLTKHPAKRLGCGP 248 (324)
T ss_pred CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCC
Confidence 777788999999999888776666643322222222211111 1123578899999999999999999986
Q ss_pred ---HHHhcCCCCCCC
Q psy8260 380 ---EQALAHPYLSQY 391 (427)
Q Consensus 380 ---~e~L~Hp~f~~~ 391 (427)
+++++||||...
T Consensus 249 ~~~~~~~~hp~~~~~ 263 (324)
T cd05587 249 TGERDIREHAFFRRI 263 (324)
T ss_pred CCHHHHhcCCCcCCC
Confidence 899999999864
No 99
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.7e-40 Score=326.21 Aligned_cols=264 Identities=20% Similarity=0.276 Sum_probs=196.0
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
.+....|.+.+.||+|+||.||. +.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++...
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~-~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~-- 115 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQL-VRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD-- 115 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEE-EEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC--
Confidence 44457899999999999999996 56777899999999864321 222334466899999999999999999988653
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
..+|++||++ +++|.++++...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 116 ----~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 116 ----RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred ----CEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 4689999988 78999999888899999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
....... .....+||+.|+|||+
T Consensus 192 ~~~~~~~---------------------------------------------------------~~~~~~gt~~y~aPE~ 214 (371)
T cd05622 192 MNKEGMV---------------------------------------------------------RCDTAVGTPDYISPEV 214 (371)
T ss_pred cCcCCcc---------------------------------------------------------cccCcccCccccCHHH
Confidence 3221000 0012245666666666
Q ss_pred hhhcc----CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 298 MLNWM----HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 298 l~~~~----~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
+.+.. +...+|+||+|++++.|.++..||..........+......... +. ....+++++++||.+||+.++
T Consensus 215 l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~-~~~~~s~~~~~li~~~L~~~~ 290 (371)
T cd05622 215 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT---FP-DDNDISKEAKNLICAFLTDRE 290 (371)
T ss_pred HhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc---CC-CcCCCCHHHHHHHHHHcCChh
Confidence 54432 45678999999999988776666654322222222222111111 11 123578999999999998444
Q ss_pred CC--CCCHHHHhcCCCCCCC
Q psy8260 374 EK--RITAEQALAHPYLSQY 391 (427)
Q Consensus 374 ~~--R~ta~e~L~Hp~f~~~ 391 (427)
.+ |++++|+++||||.+.
T Consensus 291 ~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 291 VRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred hhcCCCCHHHHhcCcccCCC
Confidence 33 7899999999999763
No 100
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.3e-39 Score=315.31 Aligned_cols=277 Identities=29% Similarity=0.450 Sum_probs=198.3
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|++.+.||.|+||.||++ .+..+|+.||+|++..............+|+.++++++|+||+++++++.... ..
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~ 81 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRA-RDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH----LD 81 (309)
T ss_pred cceeEeeeeeecCCEEEEEE-EECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC----CC
Confidence 46888899999999999965 56678999999988643322222234568999999999999999999986432 24
Q ss_pred eEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+++++++++++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 82 SIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred eEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 5799999998888888764 46899999999999999999999999999999999999999999999999998754321
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN- 300 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~- 300 (427)
... .....+++.|+|||++.+
T Consensus 162 ~~~----------------------------------------------------------~~~~~~~~~y~aPE~~~~~ 183 (309)
T cd07845 162 AKP----------------------------------------------------------MTPKVVTLWYRAPELLLGC 183 (309)
T ss_pred cCC----------------------------------------------------------CCcccccccccChhhhcCC
Confidence 100 001123455666666543
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcC----------------------CCCCcccHHhhcCCCC
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSL----------------------PLLTKKDFRQVFKGAN 358 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~s 358 (427)
..+..++|+|++|++++.+.++..+|................ +......+...+...+
T Consensus 184 ~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (309)
T cd07845 184 TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLS 263 (309)
T ss_pred CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccC
Confidence 234556789999988877755444432211111111111100 0011112223344568
Q ss_pred hhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCC
Q psy8260 359 PQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTSPPY 403 (427)
Q Consensus 359 ~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~ 403 (427)
+++.|||.+||++||++|||++|+++||||.+..-|..+...|.|
T Consensus 264 ~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~~~~~~ 308 (309)
T cd07845 264 EAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPEMMPTF 308 (309)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCCCcCCCC
Confidence 999999999999999999999999999999987766555444444
No 101
>KOG0589|consensus
Probab=100.00 E-value=6.5e-41 Score=326.04 Aligned_cols=257 Identities=23% Similarity=0.331 Sum_probs=214.2
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.|...+.+|+|+||.++. +.++..+..+++|++..........+....|+.++++++|||||.+++.|..+++
T Consensus 4 ~~Ye~~~~iG~GafG~a~l-vrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~----- 77 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALL-VRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ----- 77 (426)
T ss_pred chhhhhhhcCccccchhhh-hhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCc-----
Confidence 4577889999999999995 5667788899999998777666666778899999999999999999999886643
Q ss_pred eEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
.++|+|+|+ ||++.+.+..+ .|+++.+..|+.|++.|+.|||+++|+|||||+.||+++.++.|||.|||+|+...
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 479999999 88999988653 49999999999999999999999999999999999999999999999999998765
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
+... ...+.+|||.||.||++.
T Consensus 158 ~~~~----------------------------------------------------------~a~tvvGTp~YmcPEil~ 179 (426)
T KOG0589|consen 158 PEDS----------------------------------------------------------LASTVVGTPYYMCPEILS 179 (426)
T ss_pred Cchh----------------------------------------------------------hhheecCCCcccCHHHhC
Confidence 4310 223457888888888888
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
+.+|..++|+|+|||++|.+.+-...|..........+..+.. .......++.+.+.||..||..+|..||+|
T Consensus 180 d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-------~~Plp~~ys~el~~lv~~~l~~~P~~RPsa 252 (426)
T KOG0589|consen 180 DIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-------YSPLPSMYSSELRSLVKSMLRKNPEHRPSA 252 (426)
T ss_pred CCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-------CCCCCccccHHHHHHHHHHhhcCCccCCCH
Confidence 8899999999999999999987777676655555544443332 112234578899999999999999999999
Q ss_pred HHHhcCCCCCCC
Q psy8260 380 EQALAHPYLSQY 391 (427)
Q Consensus 380 ~e~L~Hp~f~~~ 391 (427)
.++|.+|....+
T Consensus 253 ~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 253 LELLRRPHLLRY 264 (426)
T ss_pred HHHhhChhhhhH
Confidence 999999998744
No 102
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-39 Score=319.16 Aligned_cols=250 Identities=20% Similarity=0.310 Sum_probs=188.4
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||. +.+..+++.||||++.+.... ......+.+|+.++..+ +||||++++++|... ..+|+
T Consensus 1 ~~lG~G~~g~V~~-~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~------~~~~l 73 (329)
T cd05588 1 RVIGRGSYAKVLL-VELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE------SRLFF 73 (329)
T ss_pred CeEeeCCCeEEEE-EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC------CEEEE
Confidence 3689999999995 456678999999998754322 22344567899999888 799999999998654 46789
Q ss_pred EeccC-CCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+||++ +++|...+. .+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~-- 151 (329)
T cd05588 74 VIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD-- 151 (329)
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC--
Confidence 99988 778987764 45799999999999999999999999999999999999999999999999999863211000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.....+||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (329)
T cd05588 152 --------------------------------------------------------TTSTFCGTPNYIAPEILRGEDYGF 175 (329)
T ss_pred --------------------------------------------------------ccccccCCccccCHHHHcCCCCCC
Confidence 111235777888888887777777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhc--C--c----HHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKI--S--S----DSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~--~--~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
++|+||+|++++.|.++..||.... . . ....+...... .......++++.+||.+||+.||.+|+
T Consensus 176 ~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~p~~~~~~~~~li~~~L~~dP~~R~ 248 (329)
T cd05588 176 SVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-------IRIPRSLSVKASSVLKGFLNKDPKERL 248 (329)
T ss_pred ccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-------CCCCCCCCHHHHHHHHHHhccCHHHcC
Confidence 8899999999988865555553110 0 0 01111111110 012235688999999999999999999
Q ss_pred C------HHHHhcCCCCCCC
Q psy8260 378 T------AEQALAHPYLSQY 391 (427)
Q Consensus 378 t------a~e~L~Hp~f~~~ 391 (427)
| ++|+++||||...
T Consensus 249 ~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 249 GCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred CCCCCCCHHHHhcCCCCCCC
Confidence 7 7899999999754
No 103
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-39 Score=322.86 Aligned_cols=255 Identities=25% Similarity=0.287 Sum_probs=182.5
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
....|.+.+.||+|+||.||.+ .+..+++.||+|..... ....|+.++++++||||+++++++...
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~-~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 129 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVA-TKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSG----- 129 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEE-EECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeC-----
Confidence 3456899999999999999964 56667889999975432 134699999999999999999988653
Q ss_pred CceEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...+++++++.++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 130 -~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 130 -AITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred -CeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 45788899888888887753 468999999999999999999999999999999999999999999999999986422
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
... ...+..||+.|+|||++.
T Consensus 209 ~~~-----------------------------------------------------------~~~~~~gt~~y~aPE~~~ 229 (357)
T PHA03209 209 VAP-----------------------------------------------------------AFLGLAGTVETNAPEVLA 229 (357)
T ss_pred cCc-----------------------------------------------------------ccccccccccccCCeecC
Confidence 110 011234566666777666
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhc-Cc---------HHHHHHHhcC---C-CCC------------------c
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKI-SS---------DSARKYINSL---P-LLT------------------K 347 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~-~~---------~~~~~~~~~~---~-~~~------------------~ 347 (427)
+..+..++|+||+|++++.+.+.+.++.... .. ....+..... + .+. .
T Consensus 230 ~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (357)
T PHA03209 230 RDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLER 309 (357)
T ss_pred CCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCC
Confidence 6666677788888888876533211111000 00 0000000000 0 000 0
Q ss_pred c---cHHh-hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q psy8260 348 K---DFRQ-VFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQ 390 (427)
Q Consensus 348 ~---~~~~-~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~ 390 (427)
. .+.. .....+.++.+||.+||++||.+||||+|+|+||||++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 310 QPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 0 0000 01245778899999999999999999999999999986
No 104
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-39 Score=329.86 Aligned_cols=256 Identities=23% Similarity=0.269 Sum_probs=188.1
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|.+.+.||+|+||.||. +.+..+++.||||.... ....+|+++|++++|+|||++++++...
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~-a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~------ 232 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFE-SSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVG------ 232 (461)
T ss_pred cCCeEEEEEEccCCCeEEEE-EEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEEC------
Confidence 34688899999999999996 45677899999996422 2246899999999999999999987543
Q ss_pred ceEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
...+++++++.++|..++.. ..+++..+..++.|++.||.|||++|||||||||+|||++.++.+||+|||+++....
T Consensus 233 ~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 233 GLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred CEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 35678888888888887754 3589999999999999999999999999999999999999999999999999864321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.... ....+..||+.|+|||++.+
T Consensus 313 ~~~~--------------------------------------------------------~~~~~~~GT~~Y~APE~~~~ 336 (461)
T PHA03211 313 SWST--------------------------------------------------------PFHYGIAGTVDTNAPEVLAG 336 (461)
T ss_pred cccc--------------------------------------------------------ccccccCCCcCCcCHHHHcC
Confidence 1000 00113457888888888877
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhc-------CcHHHHHHHhc----------------------------CCCC
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKI-------SSDSARKYINS----------------------------LPLL 345 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~-------~~~~~~~~~~~----------------------------~~~~ 345 (427)
..+..++|+||+|++++++.++..++.... ......+.+.. .+..
T Consensus 337 ~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 416 (461)
T PHA03211 337 DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAY 416 (461)
T ss_pred CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCcc
Confidence 777778899999999987643221111000 00000111110 0111
Q ss_pred CcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q psy8260 346 TKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQ 390 (427)
Q Consensus 346 ~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~ 390 (427)
....|.. +...++++.|||.+||++||.+|||++|+|+||||+.
T Consensus 417 ~~~~~~~-~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 417 TRPAWTR-YYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CCcchhh-hccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 1111222 2246789999999999999999999999999999964
No 105
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.3e-40 Score=320.27 Aligned_cols=250 Identities=24% Similarity=0.386 Sum_probs=190.9
Q ss_pred cccCcccccEEEEeEE--eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSAL--DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~--~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+.. +..+|+.||+|++..............+|++++++++||||+++++++... ..+|+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~l 75 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE------GKLYL 75 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC------CEEEE
Confidence 4689999999996432 356889999999875433333345567899999999999999999998654 46789
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
++|++ +++|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-- 153 (318)
T cd05582 76 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-- 153 (318)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--
Confidence 99988 6899888754 5689999999999999999999999999999999999999999999999999864321100
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
......||+.|+|||++.+..+..
T Consensus 154 --------------------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~ 177 (318)
T cd05582 154 --------------------------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQ 177 (318)
T ss_pred --------------------------------------------------------ceecccCChhhcCHHHHcCCCCCC
Confidence 011234677777888777666777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC-----HH
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT-----AE 380 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t-----a~ 380 (427)
++|+||+|++++.|.++..+|................. ......++++.+||.+||+.||.+|+| ++
T Consensus 178 ~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~--------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~ 249 (318)
T cd05582 178 SADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL--------GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVE 249 (318)
T ss_pred ccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC--------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHH
Confidence 78999999999888776666643221111221111111 122346889999999999999999999 78
Q ss_pred HHhcCCCCCCC
Q psy8260 381 QALAHPYLSQY 391 (427)
Q Consensus 381 e~L~Hp~f~~~ 391 (427)
++++||||...
T Consensus 250 ~~~~~~~~~~~ 260 (318)
T cd05582 250 EIKRHPFFSTI 260 (318)
T ss_pred HHhCCCCcCCC
Confidence 89999999764
No 106
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.4e-39 Score=318.24 Aligned_cols=254 Identities=20% Similarity=0.329 Sum_probs=188.2
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||. +.+..+++.||+|++.+... .......+.+|+.++.++ +||||+++++++... ..+|+
T Consensus 1 ~~lG~G~~g~V~~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~------~~~~l 73 (329)
T cd05618 1 RVIGRGSYAKVLL-VRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE------SRLFF 73 (329)
T ss_pred CeeeeCCCeEEEE-EEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC------CEEEE
Confidence 3689999999996 45677899999999875432 223345567899888776 899999999988654 46788
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
++|++ +++|...+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~-- 151 (329)
T cd05618 74 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-- 151 (329)
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--
Confidence 99887 6788877654 5799999999999999999999999999999999999999999999999999863211000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
......||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (329)
T cd05618 152 --------------------------------------------------------TTSTFCGTPNYIAPEILRGEDYGF 175 (329)
T ss_pred --------------------------------------------------------ccccccCCccccCHHHHcCCCCCC
Confidence 011235777888888887777777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhh--cC--cHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC---
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAK--IS--SDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT--- 378 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t--- 378 (427)
++|+||+|++++.|.++..||... .. ......+........ ...+....++++.+||.+||+.||++|+|
T Consensus 176 ~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~ 252 (329)
T cd05618 176 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK---QIRIPRSLSVKAASVLKSFLNKDPKERLGCHP 252 (329)
T ss_pred ccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCC
Confidence 899999999998886665555210 00 000000100000000 00123457889999999999999999998
Q ss_pred ---HHHHhcCCCCCCC
Q psy8260 379 ---AEQALAHPYLSQY 391 (427)
Q Consensus 379 ---a~e~L~Hp~f~~~ 391 (427)
++++++||||.+.
T Consensus 253 ~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 253 QTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCHHHHhcCCCCCCC
Confidence 5899999999864
No 107
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.3e-39 Score=318.72 Aligned_cols=260 Identities=20% Similarity=0.275 Sum_probs=189.8
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|++.+.||+|+||.||. +.+..+++.||||++.+... .....+.+.+|+.+++.++|+||++++++|... .
T Consensus 2 ~y~~~~~lG~G~~g~V~~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~ 74 (331)
T cd05597 2 DFEILKVIGRGAFGEVAV-VKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE------N 74 (331)
T ss_pred CceEEEEEEecCCeEEEE-EEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC------C
Confidence 577889999999999996 45667899999999864221 122334467899999999999999999988654 4
Q ss_pred eEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.+|+++|++ |++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 75 NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 678999887 7899998864 4699999999999999999999999999999999999999999999999999864322
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.... ......||+.|+|||++..
T Consensus 155 ~~~~---------------------------------------------------------~~~~~~gt~~y~aPE~~~~ 177 (331)
T cd05597 155 DGTV---------------------------------------------------------QSNVAVGTPDYISPEILQA 177 (331)
T ss_pred CCCc---------------------------------------------------------cccceeccccccCHHHHhh
Confidence 1100 0001134555555555542
Q ss_pred -----ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 301 -----WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 301 -----~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
..+..++|+||+|++++.|.++..||......+...+........ .+.......++++++||.+||..++.+
T Consensus 178 ~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~li~~ll~~~~~r 254 (331)
T cd05597 178 MEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHF---QFPPDVTDVSEEAKDLIRRLICSPETR 254 (331)
T ss_pred ccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcc---cCCCccCCCCHHHHHHHHHHccCcccc
Confidence 124556799999999998877766664332222222222111111 111122347889999999999775554
Q ss_pred --CCCHHHHhcCCCCCCC
Q psy8260 376 --RITAEQALAHPYLSQY 391 (427)
Q Consensus 376 --R~ta~e~L~Hp~f~~~ 391 (427)
|++++++++||||...
T Consensus 255 ~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 255 LGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred cCCCCHHHHhcCCCCCCC
Confidence 7899999999999865
No 108
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.3e-39 Score=316.70 Aligned_cols=249 Identities=23% Similarity=0.354 Sum_probs=187.6
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhc-CCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKH-MNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+ .+..+++.||||++..... .....+....|..++.. .+||||+++++++... ..+|+
T Consensus 1 ~~lG~G~~g~Vy~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~------~~~~l 73 (316)
T cd05592 1 KVLGKGSFGKVMLA-ELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK------EHLFF 73 (316)
T ss_pred CeeeeCCCeEEEEE-EECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC------CEEEE
Confidence 36899999999964 4567899999999865322 12233445667777765 4899999999988654 46889
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+||++ |++|...+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~-- 151 (316)
T cd05592 74 VMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG-- 151 (316)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC--
Confidence 99988 7899887754 5799999999999999999999999999999999999999999999999999863211100
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.....+||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (316)
T cd05592 152 --------------------------------------------------------KASTFCGTPDYIAPEILKGQKYNE 175 (316)
T ss_pred --------------------------------------------------------ccccccCCccccCHHHHcCCCCCC
Confidence 111235778888888887777778
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH-HHHhc
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA-EQALA 384 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta-~e~L~ 384 (427)
++|+||+|++++.|.++..+|................+. .....++++.+||.+||+.||.+|+++ +++++
T Consensus 176 ~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 176 SVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPH--------FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred cccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 889999999998886666666433221222222111111 123467899999999999999999986 58889
Q ss_pred CCCCCCC
Q psy8260 385 HPYLSQY 391 (427)
Q Consensus 385 Hp~f~~~ 391 (427)
||||...
T Consensus 248 h~~~~~~ 254 (316)
T cd05592 248 HPFFRGI 254 (316)
T ss_pred CcccCCC
Confidence 9999864
No 109
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.2e-39 Score=317.18 Aligned_cols=249 Identities=21% Similarity=0.306 Sum_probs=190.4
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+ .+..+++.||||++.+... .........+|+++++.+ +||||+++++++... ..+|+
T Consensus 1 ~~lG~G~~g~V~~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~------~~~~l 73 (318)
T cd05570 1 KVLGKGSFGKVLLA-ELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK------DRLFF 73 (318)
T ss_pred CeeeeCCCeEEEEE-EECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC------CEEEE
Confidence 36899999999964 5667899999999875321 122344567898998877 799999999988654 46789
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
++|++ +++|...+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 151 (318)
T cd05570 74 VMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV-- 151 (318)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--
Confidence 99988 7889877755 4799999999999999999999999999999999999999999999999998863211000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.....+||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~ 175 (318)
T cd05570 152 --------------------------------------------------------TTSTFCGTPDYIAPEILSYQPYGP 175 (318)
T ss_pred --------------------------------------------------------cccceecCccccCHHHhcCCCCCc
Confidence 011234677888888887777778
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH-----H
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA-----E 380 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta-----~ 380 (427)
++|+||+|++++.|.++..+|.................. .....++++.|||.+||+.||.+|+|+ .
T Consensus 176 ~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~ 247 (318)
T cd05570 176 AVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR--------YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQ 247 (318)
T ss_pred chhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC--------CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHH
Confidence 889999999998887766666432211111111111111 123468899999999999999999999 9
Q ss_pred HHhcCCCCCCC
Q psy8260 381 QALAHPYLSQY 391 (427)
Q Consensus 381 e~L~Hp~f~~~ 391 (427)
++++||||...
T Consensus 248 ~ll~~~~~~~~ 258 (318)
T cd05570 248 DIKGHPFFREI 258 (318)
T ss_pred HHhcCCCcCCC
Confidence 99999999864
No 110
>KOG0586|consensus
Probab=100.00 E-value=3.3e-40 Score=325.79 Aligned_cols=259 Identities=24% Similarity=0.345 Sum_probs=209.4
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
....+.|.+.+.||+|.|+.|.. +.+..||..||||.+.+...+....+...+|+++|+.++|||||+|+.+.+..
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~L-a~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~--- 127 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKL-ARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE--- 127 (596)
T ss_pred cccccceeeeeeeccceeEEEEe-eEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec---
Confidence 44557789999999999999885 56777899999999998877777777789999999999999999999998764
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
..+|+||||+ +|.+++++.. +++.+..++.++.|+++|++|||+++|+|||||++||||+.+.++||+|||++..
T Consensus 128 ---~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~ 204 (596)
T KOG0586|consen 128 ---ATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTF 204 (596)
T ss_pred ---ceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeecccccee
Confidence 5789999998 7888887754 6788899999999999999999999999999999999999999999999999865
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
+... .+..+.||++.|.|||+
T Consensus 205 ~~~~-----------------------------------------------------------~~lqt~cgsppyAaPEl 225 (596)
T KOG0586|consen 205 FDYG-----------------------------------------------------------LMLQTFCGSPPYAAPEL 225 (596)
T ss_pred eccc-----------------------------------------------------------ccccccCCCCCccChHh
Confidence 3211 13345567777777777
Q ss_pred hhhccCCC-CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 298 MLNWMHYN-QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 298 l~~~~~~~-~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
..+..+.. .+|+|++|+++|.|-.+..||....-.......+... ..+.-.++.++.+||++||.+||.+|
T Consensus 226 ~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk--------~rIp~~ms~dce~lLrk~lvl~Pskr 297 (596)
T KOG0586|consen 226 FNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK--------YRIPFYMSCDCEDLLRKFLVLNPSKR 297 (596)
T ss_pred hcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeee--------ecccceeechhHHHHHHhhccCcccc
Confidence 77666544 4699999999999988887776543322211111111 12223468899999999999999999
Q ss_pred CCHHHHhcCCCCCCCC
Q psy8260 377 ITAEQALAHPYLSQYS 392 (427)
Q Consensus 377 ~ta~e~L~Hp~f~~~~ 392 (427)
++.+|++.|.|.....
T Consensus 298 ~~~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 298 GPCDQIMKDRWRNDLL 313 (596)
T ss_pred CCHHHhhhhcccchhh
Confidence 9999999999997543
No 111
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.5e-40 Score=327.80 Aligned_cols=262 Identities=24% Similarity=0.328 Sum_probs=192.8
Q ss_pred ccCcceeeccccCcccccEEEEeEE-eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSAL-DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~-~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
+....|.+.+.||.|+||.||.+.. +..+++.||+|.+... ....+|+++|++++|||||+++++|...
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~--- 158 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWK--- 158 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeC---
Confidence 3456799999999999999997654 3456789999988542 1245799999999999999999988643
Q ss_pred cCCceEEEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 140 ADFKNVYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 140 ~~~~~~~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
..+|+++++++++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 159 ---~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 159 ---STVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred ---CEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 46789999998888887753 56999999999999999999999999999999999999999999999999998643
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
...... ....+..||+.|+|||++
T Consensus 236 ~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE~~ 259 (392)
T PHA03207 236 DAHPDT--------------------------------------------------------PQCYGWSGTLETNSPELL 259 (392)
T ss_pred Cccccc--------------------------------------------------------ccccccccccCccCHhHh
Confidence 221100 011134577888888888
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc---HHHHHHHhc---CCC-CCc--------------------ccHH
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS---DSARKYINS---LPL-LTK--------------------KDFR 351 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~---~~~~~~~~~---~~~-~~~--------------------~~~~ 351 (427)
.+..+..++|+||+|++++.|.++..+|...... ......... .+. ++. ....
T Consensus 260 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (392)
T PHA03207 260 ALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIP 339 (392)
T ss_pred cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCcccc
Confidence 7777777889999999998875544444322110 001111100 000 000 0000
Q ss_pred hhc--CCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 352 QVF--KGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 352 ~~~--~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
..+ ...+.++.+||.+||++||.+|||+.|+|+||||.+.
T Consensus 340 ~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 340 PVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred chhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 111 1346789999999999999999999999999999763
No 112
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.2e-39 Score=313.37 Aligned_cols=257 Identities=30% Similarity=0.493 Sum_probs=176.6
Q ss_pred ccccCcccccEEEEeEE-eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 69 GPTLSKESFDLIFSSAL-DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 69 ~~~lg~g~fg~v~~~~~-~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+..||+|+||.||++.. +..++..||+|.+..... .....+|+++++.++||||+++++++... ....+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~~~l 77 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSH----SDRKVWL 77 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEecc----CCCeEEE
Confidence 46899999999998754 335678999998865322 23466899999999999999999987542 2246789
Q ss_pred EeccCCCCHHHHHhh----------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEE----cCCCCEEEeeCC
Q psy8260 148 VTHLMGADLNNILRT----------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV----NEDCELKILDFG 213 (427)
Q Consensus 148 v~e~~g~~L~~~l~~----------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl----~~~~~~kl~DFG 213 (427)
++++++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 78 v~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 78 LFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred EEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 999998888877642 247889999999999999999999999999999999999 456799999999
Q ss_pred CCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 214 LARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 214 la~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
+++......... .......||+.|+
T Consensus 158 ~a~~~~~~~~~~-------------------------------------------------------~~~~~~~~t~~y~ 182 (317)
T cd07867 158 FARLFNSPLKPL-------------------------------------------------------ADLDPVVVTFWYR 182 (317)
T ss_pred ceeccCCCcccc-------------------------------------------------------cccCcceeccccc
Confidence 987543211000 0011234566666
Q ss_pred chHHhhhc-cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc---------HHHHHHHhc--------------CCC-----
Q psy8260 294 APEIMLNW-MHYNQTDIHQLNLIMEMLGTPPAEFMAKISS---------DSARKYINS--------------LPL----- 344 (427)
Q Consensus 294 APEvl~~~-~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~---------~~~~~~~~~--------------~~~----- 344 (427)
|||++.+. .+..++|+||+|++++.+.++..+|...... ......... .+.
T Consensus 183 aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (317)
T cd07867 183 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQ 262 (317)
T ss_pred CcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhh
Confidence 66666543 2445568888888877665544443211000 000000000 000
Q ss_pred -------CCcccH----HhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 345 -------LTKKDF----RQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 345 -------~~~~~~----~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
...... .......+..++|||.+||+.||.+|+|++|+|+||||
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 263 KDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000000 00111245678999999999999999999999999998
No 113
>KOG0671|consensus
Probab=100.00 E-value=9.4e-40 Score=305.99 Aligned_cols=280 Identities=26% Similarity=0.428 Sum_probs=212.1
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCC--CC----ceeeeeee
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNH--EN----VIGLLDVF 133 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~H--pn----Iv~l~~~~ 133 (427)
....++|.+.+.+|+|.||.|+. ++|..++..||||+++.- ..-.+...-|+++|.++++ || +|++.++|
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~e-c~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF 160 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVE-CWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF 160 (415)
T ss_pred cccccceehhhhhcCCcccceEE-EeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh
Confidence 44467889999999999999995 678888999999988632 2334556679999999943 33 67787777
Q ss_pred ecCccccCCceEEEEeccCCCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-------
Q psy8260 134 HSNTCLADFKNVYMVTHLMGADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE------- 203 (427)
Q Consensus 134 ~~~~~~~~~~~~~lv~e~~g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~------- 203 (427)
... .++++++|++|-++.++++.+ +++..+++.+++|++.+++|||+.+++|-||||||||+.+
T Consensus 161 dyr------ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~ 234 (415)
T KOG0671|consen 161 DYR------GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTY 234 (415)
T ss_pred hcc------CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEe
Confidence 543 578999999999999999764 5899999999999999999999999999999999999731
Q ss_pred -------------CCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhh
Q psy8260 204 -------------DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKI 270 (427)
Q Consensus 204 -------------~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki 270 (427)
+..+||+|||.|+...+..+..+.|+.|+|||++++-.- . +.+|+||.||++-|
T Consensus 235 ~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGw----S---~pCDvWSiGCIL~E------ 301 (415)
T KOG0671|consen 235 NPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGW----S---QPCDVWSIGCILVE------ 301 (415)
T ss_pred ccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCc----C---CccCceeeeeEEEE------
Confidence 235899999999988888888899999999999997321 1 12399999999987
Q ss_pred hccCCCCCCccccccccccccccchHHhhhccCC-CCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCC-CC---
Q psy8260 271 LDFGLARPTENEMTGYVATRWYRAPEIMLNWMHY-NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP-LL--- 345 (427)
Q Consensus 271 ~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~-~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~--- 345 (427)
..+|.. +| ...|...|.++-.+||..|..+..+.. ..++..... .+
T Consensus 302 -----------lytG~~---------------LFqtHen~EHLaMMerIlGp~P~~mi~r~~---~~Kyf~~~rldw~e~ 352 (415)
T KOG0671|consen 302 -----------LYTGET---------------LFQTHENLEHLAMMERILGPIPSRMIKKTR---KEKYFRRGRLDWPEV 352 (415)
T ss_pred -----------eeccce---------------ecccCCcHHHHHHHHHhhCCCcHHHhhhhh---hHhhhhcccccCccc
Confidence 333432 33 334788898888999976665554431 222322110 00
Q ss_pred -----------CcccHHhhcCCCCh---hHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 346 -----------TKKDFRQVFKGANP---QAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 346 -----------~~~~~~~~~~~~s~---~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
..+.+.......+. ++.|||.+||.+||++|+|+.|||.||||...
T Consensus 353 ~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 353 SSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred cccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 01122233333343 45699999999999999999999999999875
No 114
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.4e-39 Score=317.51 Aligned_cols=250 Identities=23% Similarity=0.334 Sum_probs=188.3
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHH-HHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELR-MLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~-~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||. +.+..+|+.||||++.+... .......+++|.. +++.++||||+++++++... ..+|+
T Consensus 1 ~~lg~G~~g~V~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~------~~~~l 73 (323)
T cd05575 1 KVIGKGSFGKVLL-AKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA------DKLYF 73 (323)
T ss_pred CeeeeCCCeEEEE-EEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC------CEEEE
Confidence 3689999999996 45777899999999864321 1222344555655 56789999999999888653 46789
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+|+++ +++|...+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~-- 151 (323)
T cd05575 74 VLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK-- 151 (323)
T ss_pred EEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC--
Confidence 99888 7789887754 5689999999999999999999999999999999999999999999999999863211000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.....+||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (323)
T cd05575 152 --------------------------------------------------------TTSTFCGTPEYLAPEVLRKQPYDR 175 (323)
T ss_pred --------------------------------------------------------ccccccCChhhcChhhhcCCCCCc
Confidence 111235777788888877777777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH----HH
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA----EQ 381 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta----~e 381 (427)
++|+||+|++++.|.++..+|................. ......++++.+||.+||+.||.+|+++ +|
T Consensus 176 ~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (323)
T cd05575 176 TVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL--------RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLE 247 (323)
T ss_pred cccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--------CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHH
Confidence 88999999999988777666643322222222221111 1223568899999999999999999998 69
Q ss_pred HhcCCCCCCCC
Q psy8260 382 ALAHPYLSQYS 392 (427)
Q Consensus 382 ~L~Hp~f~~~~ 392 (427)
+++||||....
T Consensus 248 il~~~~~~~~~ 258 (323)
T cd05575 248 IKNHVFFSSIN 258 (323)
T ss_pred HHcCCCcCCCC
Confidence 99999997643
No 115
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.7e-39 Score=316.02 Aligned_cols=250 Identities=23% Similarity=0.335 Sum_probs=189.7
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhc-CCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKH-MNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+ .+..+++.||||.+..... ..........|..+++. ++||||+++++++... ..+|+
T Consensus 1 ~~lG~G~~g~Vy~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~------~~~~l 73 (316)
T cd05619 1 KMLGKGSFGKVFLA-ELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK------ENLFF 73 (316)
T ss_pred CeeeeCCCEEEEEE-EECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC------CEEEE
Confidence 36899999999964 5667899999999865321 11223445678888875 5999999999998654 45789
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
++|++ +++|...+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 74 v~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 150 (316)
T cd05619 74 VMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--- 150 (316)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC---
Confidence 99987 7899988865 568999999999999999999999999999999999999999999999999886321100
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.......||+.|+|||++.+..+..
T Consensus 151 -------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 175 (316)
T cd05619 151 -------------------------------------------------------AKTCTFCGTPDYIAPEILLGQKYNT 175 (316)
T ss_pred -------------------------------------------------------CceeeecCCccccCHHHHcCCCCCc
Confidence 0111235778888888887777788
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH-HHhc
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE-QALA 384 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~-e~L~ 384 (427)
++|+||+|++++.|.++..||................+.. ....+.+++|||.+||+.||.+|+++. ++++
T Consensus 176 ~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 176 SVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCY--------PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred hhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--------CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 8999999999988877666664332112121111111111 123678999999999999999999996 8999
Q ss_pred CCCCCCCC
Q psy8260 385 HPYLSQYS 392 (427)
Q Consensus 385 Hp~f~~~~ 392 (427)
||||....
T Consensus 248 h~~~~~~~ 255 (316)
T cd05619 248 HPFFREID 255 (316)
T ss_pred CcccCCCC
Confidence 99998753
No 116
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.6e-39 Score=312.09 Aligned_cols=262 Identities=27% Similarity=0.464 Sum_probs=189.4
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||.|+||.||.+ .+..+++.||+|.+..... ........+|+.+++.++||||+++++++... .
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~-~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~------~ 77 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKG-RSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTE------K 77 (301)
T ss_pred cceEEeeEeccCcCEEEEEE-EEcCCCcEEEEEEEecccc-cCchhHHHHHHHHHHhcCCCCcceEEEEEecC------C
Confidence 45788899999999999964 5667899999998864322 12233466899999999999999999998654 4
Q ss_pred eEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..++++++++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 78 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 78 SLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred eEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 5799999998899887754 45899999999999999999999999999999999999999999999999998643211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. ......+++.|+|||++.+.
T Consensus 158 ~~----------------------------------------------------------~~~~~~~~~~y~~PE~~~~~ 179 (301)
T cd07873 158 TK----------------------------------------------------------TYSNEVVTLWYRPPDILLGS 179 (301)
T ss_pred CC----------------------------------------------------------cccccceeecccCcHHHhCC
Confidence 10 00112345556666665432
Q ss_pred -cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc----------------------CCCCCcccHHhhcCCCC
Q psy8260 302 -MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS----------------------LPLLTKKDFRQVFKGAN 358 (427)
Q Consensus 302 -~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~s 358 (427)
.+..++|+||+|++++.|.++..+|......+........ .+.............++
T Consensus 180 ~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (301)
T cd07873 180 TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLD 259 (301)
T ss_pred CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCC
Confidence 2444568888888887775554444321111111111100 01111111122334578
Q ss_pred hhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 359 PQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 359 ~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
++++|||.+||+.||.+|+|++|+|+||||...
T Consensus 260 ~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 260 SDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 899999999999999999999999999999765
No 117
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=8.1e-39 Score=313.18 Aligned_cols=301 Identities=45% Similarity=0.732 Sum_probs=205.1
Q ss_pred eeeccccCcccccEEEEeEEeCcC--CcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~--g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~ 142 (427)
|.+.+.||.|+||.||.+. +..+ +..||||++..........+.+.+|+.+++++ +||||+++++...... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 78 (332)
T cd07857 2 YELIKELGQGAYGIVCSAR-NAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP--GNF 78 (332)
T ss_pred ceEEEEccccCCeEEEEEE-eCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc--ccC
Confidence 6778899999999999654 4555 88999999865433333455677899999999 5999999998753221 122
Q ss_pred ceEEEEeccCCCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 143 KNVYMVTHLMGADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..+|+++++++++|.+.+. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 79 ~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 79 NELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred CcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 4578999999989988875 456899999999999999999999999999999999999999999999999998754321
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN- 300 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~- 300 (427)
.... . ....+..||+.|+|||++.+
T Consensus 159 ~~~~-------~-----------------------------------------------~~~~~~~g~~~y~aPE~~~~~ 184 (332)
T cd07857 159 PGEN-------A-----------------------------------------------GFMTEYVATRWYRAPEIMLSF 184 (332)
T ss_pred cccc-------c-----------------------------------------------ccccCcccCccccCcHHHhCC
Confidence 1000 0 00012234555555555433
Q ss_pred ccCCCCCCHHHHHHHHHHh-----------------------CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCC
Q psy8260 301 WMHYNQTDIHQLNLIMEML-----------------------GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGA 357 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~l-----------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (427)
..+..++|+||+|++++.+ |.++.+............+...........+.......
T Consensus 185 ~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (332)
T cd07857 185 QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNA 264 (332)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCC
Confidence 2344455666666666544 22222221111111111111122222223344445567
Q ss_pred ChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC-CCCCcccccCCCCHHHHHHHHhhh
Q psy8260 358 NPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQSFEDMDLPVDQWKGTYSLE 424 (427)
Q Consensus 358 s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 424 (427)
++++.+||.+||+.||.+|||++|++.||||.++.+|...+.. .+++.+++. .-+.+.++..+-.|
T Consensus 265 ~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 331 (332)
T cd07857 265 NPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEPVCQKPFDFSFES-EDSMEELRDMIIEE 331 (332)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccccccccccccCCccc-cccHHHHHHHHhhc
Confidence 8899999999999999999999999999999999887666554 444545543 34566666655443
No 118
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.5e-39 Score=309.07 Aligned_cols=258 Identities=31% Similarity=0.519 Sum_probs=188.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.||.|++|.||.+ .+..+|+.||||++............+.+|+.+++.++||||+++++++..+ ...
T Consensus 2 y~~~~~l~~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~ 74 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKG-RNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE------SRL 74 (285)
T ss_pred ceEeeEecccCceEEEEE-EECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC------CeE
Confidence 567789999999999965 4667899999999865433333345577899999999999999999998653 467
Q ss_pred EEEeccCCCCHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 146 YMVTHLMGADLNNILRT----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
|++++++.++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 75 YLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred EEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 99999998888877753 45899999999999999999999999999999999999999999999999998643211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. ......+++.|+|||++.+.
T Consensus 155 ~~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 176 (285)
T cd07861 155 VR----------------------------------------------------------VYTHEVVTLWYRAPEVLLGS 176 (285)
T ss_pred cc----------------------------------------------------------cccCCcccccccChHHhcCC
Confidence 00 00112345667777766543
Q ss_pred c-CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHH---------------------HHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 302 M-HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSA---------------------RKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 302 ~-~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
. +..++|+||+|++++.+.++..+|......... ..+....+.............+++
T Consensus 177 ~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (285)
T cd07861 177 PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDE 256 (285)
T ss_pred CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCH
Confidence 2 445679999999888775544333211100000 011111112222223334456789
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
++++||.+||+.||++|||++|+++||||
T Consensus 257 ~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 257 DGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 99999999999999999999999999998
No 119
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.5e-39 Score=319.48 Aligned_cols=260 Identities=23% Similarity=0.316 Sum_probs=186.4
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...+++.+.||+|+||.||.+ .+..+|+.||||++.... .......+.+|+++++.++|+||+++++++...
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 144 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKV-IHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHN------ 144 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEE-EECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC------
Confidence 355778889999999999964 566789999999986432 333455678999999999999999999988643
Q ss_pred ceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..+|+++||+ +++|... ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 145 ~~~~lv~e~~~~~~L~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 145 GEIQVLLEFMDGGSLEGT---HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred CeEEEEEecCCCCccccc---ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 4678899888 5676542 34577888899999999999999999999999999999999999999999998754321
Q ss_pred ---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 222 ---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 222 ---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
.....||..|+|||++.....
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~-------------------------------------------------------- 245 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLN-------------------------------------------------------- 245 (353)
T ss_pred cccccccccCccccCccccccccc--------------------------------------------------------
Confidence 123345555555554421000
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
.+.....++|+||+|++++.|.++..+|......+.. ......... .........++++++||.+||+.||++|+|
T Consensus 246 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt 321 (353)
T PLN00034 246 HGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWA-SLMCAICMS---QPPEAPATASREFRHFISCCLQREPAKRWS 321 (353)
T ss_pred cCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHH-HHHHHHhcc---CCCCCCCccCHHHHHHHHHHccCChhhCcC
Confidence 0011223679999999998886665555321111111 111000000 001122356789999999999999999999
Q ss_pred HHHHhcCCCCCCCCC
Q psy8260 379 AEQALAHPYLSQYSD 393 (427)
Q Consensus 379 a~e~L~Hp~f~~~~~ 393 (427)
++|+|+||||.+...
T Consensus 322 ~~ell~hp~~~~~~~ 336 (353)
T PLN00034 322 AMQLLQHPFILRAQP 336 (353)
T ss_pred HHHHhcCcccccCCc
Confidence 999999999987543
No 120
>KOG0192|consensus
Probab=100.00 E-value=3.6e-39 Score=314.79 Aligned_cols=251 Identities=28% Similarity=0.383 Sum_probs=193.1
Q ss_pred ccccCcceeeccccCcccccEEEEeEEeCcCCcE-EEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVSGVK-VAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~-vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
+++.-..+.+.+.+|.|+||.||++.+. |+. ||||++..........+.+.+|+.+|.+++|||||+++++.....
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~---g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWR---GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP 112 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeC---CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4454556677788999999999988774 445 999999876555555677889999999999999999999975431
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcC-ceeccCCCCCeEEcCCC-CEEEee
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDC-ELKILD 211 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~-iiHrDLKp~NILl~~~~-~~kl~D 211 (427)
....+||||+ +|+|.+++.. ..++...+..++.||++||+|||+++ ||||||||+|||++.++ .+||+|
T Consensus 113 -----~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~D 187 (362)
T KOG0192|consen 113 -----GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIAD 187 (362)
T ss_pred -----CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECC
Confidence 1478888888 8999999955 57999999999999999999999999 99999999999999997 999999
Q ss_pred CCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccc
Q psy8260 212 FGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291 (427)
Q Consensus 212 FGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~ 291 (427)
||+++....... ..+...||+.
T Consensus 188 FGlsr~~~~~~~----------------------------------------------------------~~~~~~GT~~ 209 (362)
T KOG0192|consen 188 FGLSREKVISKT----------------------------------------------------------SMTSVAGTYR 209 (362)
T ss_pred Cccceeeccccc----------------------------------------------------------cccCCCCCcc
Confidence 999975432100 1122356777
Q ss_pred ccchHHhh--hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc--CCCCCcccHHhhcCCCChhHHHHHHH
Q psy8260 292 YRAPEIML--NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS--LPLLTKKDFRQVFKGANPQAIDLLSL 367 (427)
Q Consensus 292 Y~APEvl~--~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~dLi~~ 367 (427)
|||||++. +..+..++|+||+|+++.++.++..||............... .|..+ ....+...+|+.+
T Consensus 210 wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--------~~~~~~l~~l~~~ 281 (362)
T KOG0192|consen 210 WMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--------KECPPHLSSLMER 281 (362)
T ss_pred ccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--------ccCCHHHHHHHHH
Confidence 77777777 457888999999999999998876666433221222222111 12211 2256788999999
Q ss_pred hcCCCCCCCCCHHHHh
Q psy8260 368 MLELDSEKRITAEQAL 383 (427)
Q Consensus 368 mL~~dP~~R~ta~e~L 383 (427)
|..-||.+||+..|++
T Consensus 282 CW~~dp~~RP~f~ei~ 297 (362)
T KOG0192|consen 282 CWLVDPSRRPSFLEIV 297 (362)
T ss_pred hCCCCCCcCCCHHHHH
Confidence 9999999999998864
No 121
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.6e-39 Score=315.49 Aligned_cols=253 Identities=21% Similarity=0.275 Sum_probs=193.3
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCc
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
|.+.+.||+|+||.||.+ .+..+++.||||++.+... ..........|..++..+ +|++|+++++++... .
T Consensus 2 f~~~~~lg~G~~g~Vy~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~------~ 74 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLA-ERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM------D 74 (323)
T ss_pred ceEEEEEeeCCCeEEEEE-EECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC------C
Confidence 677889999999999964 5677899999999875422 122334456788888777 578999999887653 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|+++|++ +++|...+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 75 RLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred EEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 678999988 6899877754 57999999999999999999999999999999999999999999999999998632110
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. .....+||+.|+|||++.+.
T Consensus 155 ~~----------------------------------------------------------~~~~~~gt~~y~aPE~~~~~ 176 (323)
T cd05616 155 GV----------------------------------------------------------TTKTFCGTPDYIAPEIIAYQ 176 (323)
T ss_pred CC----------------------------------------------------------ccccCCCChhhcCHHHhcCC
Confidence 00 01123578888888888877
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC---
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT--- 378 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t--- 378 (427)
.+..++|+||+|++++.|.++..||.................. .....++++.+||.+||+.||.+|++
T Consensus 177 ~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~--------~p~~~s~~~~~li~~~l~~~p~~R~~~~~ 248 (323)
T cd05616 177 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA--------YPKSMSKEAVAICKGLMTKHPGKRLGCGP 248 (323)
T ss_pred CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCCcCCHHHHHHHHHHcccCHHhcCCCCC
Confidence 7888899999999999887766666433222222222211111 12346889999999999999999998
Q ss_pred --HHHHhcCCCCCCC
Q psy8260 379 --AEQALAHPYLSQY 391 (427)
Q Consensus 379 --a~e~L~Hp~f~~~ 391 (427)
.+++++||||...
T Consensus 249 ~~~~~i~~h~~~~~~ 263 (323)
T cd05616 249 EGERDIKEHAFFRYI 263 (323)
T ss_pred CCHHHHhcCCCcCCC
Confidence 4899999999864
No 122
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.2e-39 Score=309.41 Aligned_cols=258 Identities=28% Similarity=0.477 Sum_probs=187.5
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.||.|+||.||. +.+..+|+.||+|.+............+.+|+.+++.++||||+++++++... ..+
T Consensus 2 y~~~~~l~~g~~~~vy~-~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~------~~~ 74 (284)
T cd07839 2 YEKLEKIGEGTYGTVFK-AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD------KKL 74 (284)
T ss_pred ceeEEEecccCCeEEEE-EEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC------Cce
Confidence 56778899999999996 55677899999999865432222334567899999999999999999988653 457
Q ss_pred EEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 146 YMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
++++++++++|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 75 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 75 TLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 99999998888887653 5689999999999999999999999999999999999999999999999999864322110
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc-
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM- 302 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~- 302 (427)
......+++.|+|||++.+..
T Consensus 155 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 176 (284)
T cd07839 155 ----------------------------------------------------------CYSAEVVTLWYRPPDVLFGAKL 176 (284)
T ss_pred ----------------------------------------------------------CcCCCccccCCcChHHHhCCcc
Confidence 001123455666666665433
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcH-HHHHHH--------------hcCCC------C-CcccHHhhcCCCChh
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSD-SARKYI--------------NSLPL------L-TKKDFRQVFKGANPQ 360 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~-~~~~~~--------------~~~~~------~-~~~~~~~~~~~~s~~ 360 (427)
+..++|+||+|++++.|.++..|+....... ...... ...+. . ....+.+..+..+++
T Consensus 177 ~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (284)
T cd07839 177 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNST 256 (284)
T ss_pred cCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHH
Confidence 4556799999999887754333322111110 000000 00000 0 111223444567899
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 361 AIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 361 ~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
++|||.+||+.||.+|||++|+++||||
T Consensus 257 ~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 257 GRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred HHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 9999999999999999999999999998
No 123
>KOG0612|consensus
Probab=100.00 E-value=1.3e-40 Score=345.69 Aligned_cols=275 Identities=22% Similarity=0.298 Sum_probs=204.7
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH-HHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV-HAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
.+...+|+|.+.||+|+||.|.. +..+.|++.||+|++++-..... ....|..|-.+|..-+.+-||+|+..|+++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~l-Vr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~-- 147 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVAL-VRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE-- 147 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEE-EEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc--
Confidence 34567899999999999999985 56778999999999875322211 223344567788888899999999888654
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
.++|+||+|+ ||||..++... +++++.+++|+..|+.||+-||+.|.|||||||+|||||..|++||+|||.+-
T Consensus 148 ----~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 ----RYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ----cceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHH
Confidence 6789999887 99999999764 59999999999999999999999999999999999999999999999999875
Q ss_pred CCCCC----cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 217 PTENE----MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 217 ~~~~~----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
.+..+ ....+|||-|.+||+|.....+
T Consensus 224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~------------------------------------------------- 254 (1317)
T KOG0612|consen 224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDG------------------------------------------------- 254 (1317)
T ss_pred hcCCCCcEEeccccCCCCccCHHHHHhhcCC-------------------------------------------------
Confidence 44322 1233455555555544321000
Q ss_pred cchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 293 RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 293 ~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
...|+..+||||+|+++|+|..+..||....--++..++.+....+ .|+.. ..+|++|+|||.++|. +
T Consensus 255 -------~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l---~FP~~-~~VSeeakdLI~~ll~-~ 322 (1317)
T KOG0612|consen 255 -------KGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESL---SFPDE-TDVSEEAKDLIEALLC-D 322 (1317)
T ss_pred -------ccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhc---CCCcc-cccCHHHHHHHHHHhc-C
Confidence 0236677899999999999988888887654444444443321111 11111 2389999999999996 8
Q ss_pred CCCCCC---HHHHhcCCCCCCCCCCCCCCCCCC
Q psy8260 373 SEKRIT---AEQALAHPYLSQYSDPNDEPTSPP 402 (427)
Q Consensus 373 P~~R~t---a~e~L~Hp~f~~~~~~~~~~~~~~ 402 (427)
|.+|+. ++++.+||||.+....+.....||
T Consensus 323 ~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP 355 (1317)
T KOG0612|consen 323 REVRLGRNGIEDIKNHPFFEGIDWDNIRESVPP 355 (1317)
T ss_pred hhhhcccccHHHHHhCccccCCChhhhhhcCCC
Confidence 999998 999999999998766443333333
No 124
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3e-39 Score=316.44 Aligned_cols=262 Identities=21% Similarity=0.323 Sum_probs=191.9
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
+..+.|++.+.||.|+||.||. +.+..+|..||+|.+.... .......+.+|+++++.++||||++++++|...
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~-~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 75 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFK-VSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD---- 75 (333)
T ss_pred cchhhhheeccccCCCCEEEEE-EEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC----
Confidence 4567889999999999999996 4566789999999886542 334456688999999999999999999998654
Q ss_pred CCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~-~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
..++++++++ +++|.++++. +.+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++..
T Consensus 76 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 153 (333)
T cd06650 76 --GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (333)
T ss_pred --CEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchh
Confidence 4678999988 7899998865 4689999999999999999999975 799999999999999999999999999864
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
..... .....||+.|+|||+
T Consensus 154 ~~~~~------------------------------------------------------------~~~~~~~~~y~aPE~ 173 (333)
T cd06650 154 LIDSM------------------------------------------------------------ANSFVGTRSYMSPER 173 (333)
T ss_pred hhhhc------------------------------------------------------------cccCCCCccccCHHH
Confidence 32110 011235666667776
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc-------------------------CCC----CCcc
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS-------------------------LPL----LTKK 348 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~-------------------------~~~----~~~~ 348 (427)
+.+..+..++|+||+|++++.+.++..+|........ ...... .+. ....
T Consensus 174 ~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (333)
T cd06650 174 LQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKEL-ELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIF 252 (333)
T ss_pred hcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHH-HHHhcCcccCCccccccCcccCCccchhhhhcccccccccHH
Confidence 6655566678999999998777554444321110000 000000 000 0000
Q ss_pred cHHh----------hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 349 DFRQ----------VFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 349 ~~~~----------~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
.... .....++++++||.+||++||++|||++|+++||||+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 253 ELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred HHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0000 001246789999999999999999999999999999764
No 125
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.7e-39 Score=317.66 Aligned_cols=248 Identities=21% Similarity=0.343 Sum_probs=180.3
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcC---CCCCceeeeeeeecCccccCCceEEE
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHM---NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l---~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
||+|+||.||. +.+..+|+.||||++.+... .........+|..++... +||||++++++|... ..+|+
T Consensus 1 lG~G~~g~Vy~-~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~------~~~~l 73 (330)
T cd05586 1 IGKGTFGQVYQ-VRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD------SDLYL 73 (330)
T ss_pred CCCCCceEEEE-EEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC------CeEEE
Confidence 68999999996 55677899999999864321 122233455677777655 799999999988654 45789
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+|+++ +++|...+.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~-- 151 (330)
T cd05586 74 VTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK-- 151 (330)
T ss_pred EEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC--
Confidence 99987 6788877654 5699999999999999999999999999999999999999999999999999864221100
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-cCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-MHY 304 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-~~~ 304 (427)
.....+||+.|+|||++.+. .+.
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (330)
T cd05586 152 --------------------------------------------------------TTNTFCGTTEYLAPEVLLDEKGYT 175 (330)
T ss_pred --------------------------------------------------------CccCccCCccccCHHHHcCCCCCC
Confidence 01123456666666666443 245
Q ss_pred CCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC----CHH
Q psy8260 305 NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI----TAE 380 (427)
Q Consensus 305 ~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~----ta~ 380 (427)
..+|+||+|++++.|.++..||...................+. ..+++++.+||.+||+.||.+|+ +++
T Consensus 176 ~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 248 (330)
T cd05586 176 KHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK-------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAV 248 (330)
T ss_pred CccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC-------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHH
Confidence 5678999998888776666555433221211211111111111 23688999999999999999998 799
Q ss_pred HHhcCCCCCCC
Q psy8260 381 QALAHPYLSQY 391 (427)
Q Consensus 381 e~L~Hp~f~~~ 391 (427)
|+++||||...
T Consensus 249 ~ll~h~~~~~~ 259 (330)
T cd05586 249 ELKEHPFFADI 259 (330)
T ss_pred HHhcCccccCC
Confidence 99999999864
No 126
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.6e-39 Score=314.29 Aligned_cols=302 Identities=47% Similarity=0.798 Sum_probs=217.4
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
+|.+.+.||.|+||.||.+ .+..+|..||||++..........+.+.+|+.+++.++||||+++++++..... .....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~-~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSA-VDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP-EDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEE-EeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc-ccccc
Confidence 3678899999999999975 466779999999987654334455678899999999999999999998765432 22346
Q ss_pred EEEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 145 VYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
+|+++++++++|.+++.. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++........
T Consensus 79 ~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 79 VYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED 158 (330)
T ss_pred eEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence 899999998889888765 4789999999999999999999999999999999999999999999999999875433210
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-c
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-M 302 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-~ 302 (427)
. +. ......+|+.|+|||++.+. .
T Consensus 159 ~---------~~----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 183 (330)
T cd07834 159 E---------KG----------------------------------------------FLTEYVVTRWYRAPELLLSSSR 183 (330)
T ss_pred c---------cc----------------------------------------------cccccccccCcCCceeeecccC
Confidence 0 00 00111244555555555444 3
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhh-----------------------cCcHHHHHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAK-----------------------ISSDSARKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
+...+|+||+|++++.+-++..+|... ........+....+......+....+..++
T Consensus 184 ~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T cd07834 184 YTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASP 263 (330)
T ss_pred CCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCH
Confidence 455567788887776664433333211 111111222222222333344555666889
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC-CCCCc-ccccCCCCHHHHHHHHhh
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQ-SFEDMDLPVDQWKGTYSL 423 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 423 (427)
++.+||.+||++||.+|||++++++||||.++..+..++.+ ..++. .+++..+..++..+.++.
T Consensus 264 ~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (330)
T cd07834 264 EAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKPPFDFDFFDDDELTEEELKELIYE 329 (330)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCCCCCCcccccccchhhcCHHHHhHHhhc
Confidence 99999999999999999999999999999988777665444 33332 357778888888776654
No 127
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.5e-39 Score=315.95 Aligned_cols=249 Identities=24% Similarity=0.369 Sum_probs=187.3
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHH-HHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELR-MLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~-~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||. +.+..+|+.||||++.+... .......+.+|.. +++.++||||+++++++... ...|+
T Consensus 1 ~~lG~G~~g~V~~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~------~~~~l 73 (325)
T cd05604 1 KVIGKGSFGKVLL-AKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT------EKLYF 73 (325)
T ss_pred CceeeCCCeEEEE-EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC------CEEEE
Confidence 3689999999996 45677899999999865322 1223344555654 56789999999999888654 46789
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+++++ +++|...+.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-- 151 (325)
T cd05604 74 VLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD-- 151 (325)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC--
Confidence 99987 6788776654 5799999999999999999999999999999999999999999999999999863211000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.....+||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (325)
T cd05604 152 --------------------------------------------------------TTTTFCGTPEYLAPEVIRKQPYDN 175 (325)
T ss_pred --------------------------------------------------------CcccccCChhhCCHHHHcCCCCCC
Confidence 011235777788888877777777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH----HH
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA----EQ 381 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta----~e 381 (427)
++|+||+|++++.|.++..+|..........+...... ...+..+.++.+||.+||+.||.+|+++ ++
T Consensus 176 ~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 176 TVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL--------VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred cCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc--------cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 88999999999888776666644322222222222111 1123468899999999999999999987 58
Q ss_pred HhcCCCCCCC
Q psy8260 382 ALAHPYLSQY 391 (427)
Q Consensus 382 ~L~Hp~f~~~ 391 (427)
+++||||...
T Consensus 248 i~~h~~f~~~ 257 (325)
T cd05604 248 IQEHPFFESL 257 (325)
T ss_pred HhcCCCcCCC
Confidence 9999999864
No 128
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.3e-39 Score=309.10 Aligned_cols=256 Identities=22% Similarity=0.271 Sum_probs=191.7
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
|++.+.||+|+||.||.+ .+..+++.||||++....... .....+.+|+.+++.++||||+++++.+... ..
T Consensus 2 y~~~~~lg~G~~g~V~~~-~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 74 (285)
T cd05605 2 FRHYRVLGKGGFGEVCAC-QVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK------DA 74 (285)
T ss_pred ceEEEEEecCCCeEEEEE-EEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC------Ce
Confidence 567788999999999964 566789999999986532222 2234467899999999999999999887643 45
Q ss_pred EEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
++++|+++ +++|...+.. ..+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||+++....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05605 75 LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE 154 (285)
T ss_pred EEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 78899887 6889877643 3589999999999999999999999999999999999999999999999998864321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.. ...+.+||+.|+|||++.+
T Consensus 155 ~~-----------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 175 (285)
T cd05605 155 GE-----------------------------------------------------------TIRGRVGTVGYMAPEVVKN 175 (285)
T ss_pred CC-----------------------------------------------------------ccccccCCCCccCcHHhcC
Confidence 10 0012346777777777776
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC---
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI--- 377 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~--- 377 (427)
..+...+|+||+|++++.+.++..+|.................... .......++.+.+||.+||+.||++|+
T Consensus 176 ~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05605 176 ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ----EEYSEKFSEAARSICRQLLTKDPGFRLGCR 251 (285)
T ss_pred CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc----cccCcccCHHHHHHHHHHccCCHHHhcCCC
Confidence 6677778999999999877665555543221111111111110000 112234688999999999999999999
Q ss_pred --CHHHHhcCCCCCCC
Q psy8260 378 --TAEQALAHPYLSQY 391 (427)
Q Consensus 378 --ta~e~L~Hp~f~~~ 391 (427)
|++++++||||.+.
T Consensus 252 ~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 252 GEGAEEVKAHPFFRTA 267 (285)
T ss_pred CCCHHHHhcCcCccCC
Confidence 99999999999864
No 129
>KOG0668|consensus
Probab=100.00 E-value=1.5e-40 Score=291.74 Aligned_cols=282 Identities=26% Similarity=0.500 Sum_probs=217.3
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~ 141 (427)
..+|++.+.+|+|.++.||.+ .+..+.++++||.++. ...+++.||+.+|..|. ||||++|+++.....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg-~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---- 106 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEG-INITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE---- 106 (338)
T ss_pred cchHHHHHHHcCccHhhHhcc-cccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc----
Confidence 356888999999999999965 4566788999998853 34567889999999996 999999999986542
Q ss_pred CceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-CCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-~~~~kl~DFGla~~~~ 219 (427)
....-+++|+. +.++..+. ..++...++.++.|++.||+|||++||+|||+||.|++||. ...++|+|+|||.+..
T Consensus 107 SktpaLiFE~v~n~Dfk~ly--~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 107 SKTPSLIFEYVNNTDFKQLY--PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred ccCchhHhhhhccccHHHHh--hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 23445667776 55776654 35888999999999999999999999999999999999996 4689999999998765
Q ss_pred C--CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 220 N--EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 220 ~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
. +..-.+.|+.|.-||++.+...|+.+. |+||.||+++. + +
T Consensus 185 p~~eYnVRVASRyfKGPELLVdy~~YDYSL------D~WS~GcmlA~-----------------m--------------i 227 (338)
T KOG0668|consen 185 PGKEYNVRVASRYFKGPELLVDYQMYDYSL------DMWSLGCMLAS-----------------M--------------I 227 (338)
T ss_pred CCceeeeeeehhhcCCchheeechhccccH------HHHHHHHHHHH-----------------H--------------H
Confidence 4 455678999999999999988888776 99999999866 1 2
Q ss_pred hhhccCCCCC-CHHHHHHHHHHhCCCCHH-HHhhcCcHHHHHHHhcCCCCCcccHHhhcC-----CCChhHHHHHHHhcC
Q psy8260 298 MLNWMHYNQT-DIHQLNLIMEMLGTPPAE-FMAKISSDSARKYINSLPLLTKKDFRQVFK-----GANPQAIDLLSLMLE 370 (427)
Q Consensus 298 l~~~~~~~~~-d~~slg~i~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~dLi~~mL~ 370 (427)
+.+.++|.+. +..||-.|...||+.... +..+..-....++.........+.|..+.. -++|+|.|||.++|.
T Consensus 228 FrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLr 307 (338)
T KOG0668|consen 228 FRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLR 307 (338)
T ss_pred hccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHh
Confidence 3444566665 688999999999985431 122211111112222223344455555432 257999999999999
Q ss_pred CCCCCCCCHHHHhcCCCCCCCCC
Q psy8260 371 LDSEKRITAEQALAHPYLSQYSD 393 (427)
Q Consensus 371 ~dP~~R~ta~e~L~Hp~f~~~~~ 393 (427)
+|...|+||+|++.||||.....
T Consensus 308 YDHqeRlTakEam~HpyF~~~~~ 330 (338)
T KOG0668|consen 308 YDHQERLTAKEAMAHPYFAPVRE 330 (338)
T ss_pred hccccccchHHHhcCchHHHHHH
Confidence 99999999999999999976543
No 130
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.7e-39 Score=330.52 Aligned_cols=267 Identities=18% Similarity=0.248 Sum_probs=204.3
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc--
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC-- 138 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~-- 138 (427)
...++|.+.+.||+|+||.||+ +.+..+|+.||||++............+.+|+.++..++|+||+++++.|.....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~-a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLC-AKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEE-EEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 3457899999999999999996 4567789999999987665555666678899999999999999999887653221
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DF 212 (427)
......++++++|+ +++|.+.++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 11122467888887 7899988753 35899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
|+++........ ......+||+.|
T Consensus 188 Gls~~~~~~~~~--------------------------------------------------------~~~~~~~Gt~~Y 211 (496)
T PTZ00283 188 GFSKMYAATVSD--------------------------------------------------------DVGRTFCGTPYY 211 (496)
T ss_pred ccCeeccccccc--------------------------------------------------------cccccccCCcce
Confidence 998753221000 011234578888
Q ss_pred cchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 293 RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 293 ~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
+|||++.+..+..++|+||+|++++.|.++..||..........+...... .......++++.+||.+||+.|
T Consensus 212 ~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~L~~d 284 (496)
T PTZ00283 212 VAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY-------DPLPPSISPEMQEIVTALLSSD 284 (496)
T ss_pred eCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcccC
Confidence 888888877778888999999999988766666643322122222211110 1123457889999999999999
Q ss_pred CCCCCCHHHHhcCCCCCCC
Q psy8260 373 SEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 373 P~~R~ta~e~L~Hp~f~~~ 391 (427)
|.+|||+.++++|||+...
T Consensus 285 P~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 285 PKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred hhhCcCHHHHHhCHHHHHh
Confidence 9999999999999998754
No 131
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=8.5e-39 Score=313.66 Aligned_cols=258 Identities=22% Similarity=0.313 Sum_probs=188.3
Q ss_pred ccccCcceeeccccCcccccEEEEeEE----eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSAL----DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVF 133 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~----~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~ 133 (427)
+++..++|.+.+.||+|+||.||++.. +..++..||||++... ........+.+|+.+|..+ +||||+++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 356677899999999999999998653 2345678999998643 2333455678999999999 899999999986
Q ss_pred ecCccccCCceEEEEeccC-CCCHHHHHhhC-------------------------------------------------
Q psy8260 134 HSNTCLADFKNVYMVTHLM-GADLNNILRTQ------------------------------------------------- 163 (427)
Q Consensus 134 ~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~------------------------------------------------- 163 (427)
... ...++++|||+ +|+|.+++...
T Consensus 81 ~~~-----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T cd05102 81 TKP-----NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG 155 (338)
T ss_pred cCC-----CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence 532 23578888887 78998887531
Q ss_pred --------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccc
Q psy8260 164 --------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR 229 (427)
Q Consensus 164 --------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~ 229 (427)
.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~----- 230 (338)
T cd05102 156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----- 230 (338)
T ss_pred ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcch-----
Confidence 3677888899999999999999999999999999999999999999999998743211000
Q ss_pred cccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCH
Q psy8260 230 WYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDI 309 (427)
Q Consensus 230 ~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~ 309 (427)
. ......+++.|+|||++.+..+..++|+
T Consensus 231 -------~--------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi 259 (338)
T cd05102 231 -------V--------------------------------------------RKGSARLPLKWMAPESIFDKVYTTQSDV 259 (338)
T ss_pred -------h--------------------------------------------cccCCCCCccccCcHHhhcCCCCcccCH
Confidence 0 0001234567888888877778888999
Q ss_pred HHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 310 HQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 310 ~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
||+|++++.+.+ +..||................... ......++++.+||.+||+.||.+|||+.|+++
T Consensus 260 wslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 260 WSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM------RAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999986532 333332211111221111111111 112346788999999999999999999999975
No 132
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=6.4e-39 Score=312.83 Aligned_cols=253 Identities=20% Similarity=0.271 Sum_probs=192.8
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCCc
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~ 143 (427)
|++.+.||+|+||.||. +.+..+|+.||||++.+... .....+....|+.+++.+. |++|++++++|... .
T Consensus 2 f~~~~~lg~G~~g~Vy~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~------~ 74 (323)
T cd05615 2 FNFLMVLGKGSFGKVML-AERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV------D 74 (323)
T ss_pred ceEEEEEEecCCeEEEE-EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC------C
Confidence 56778999999999996 45677899999999865322 1223345668888888886 46788888887653 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|+++|++ +++|.+.+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 75 RLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 689999988 7899888765 57999999999999999999999999999999999999999999999999998632111
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. ......||+.|+|||++.+.
T Consensus 155 ~~----------------------------------------------------------~~~~~~gt~~y~aPE~~~~~ 176 (323)
T cd05615 155 GV----------------------------------------------------------TTRTFCGTPDYIAPEIIAYQ 176 (323)
T ss_pred Cc----------------------------------------------------------cccCccCCccccCHHHHcCC
Confidence 00 01123477888888888777
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC---
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT--- 378 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t--- 378 (427)
.+...+|+||+|++++.|.++..||................. ......++++.+||.+||+.||.+|++
T Consensus 177 ~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--------~~p~~~~~~~~~li~~~l~~~p~~R~~~~~ 248 (323)
T cd05615 177 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--------SYPKSLSKEAVSICKGLMTKHPSKRLGCGP 248 (323)
T ss_pred CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------CCCccCCHHHHHHHHHHcccCHhhCCCCCC
Confidence 777788999999999888776666643322222222221111 112356889999999999999999997
Q ss_pred --HHHHhcCCCCCCC
Q psy8260 379 --AEQALAHPYLSQY 391 (427)
Q Consensus 379 --a~e~L~Hp~f~~~ 391 (427)
.+++++||||...
T Consensus 249 ~~~~~i~~h~~f~~~ 263 (323)
T cd05615 249 EGERDIREHAFFRRI 263 (323)
T ss_pred CCHHHHhcCcccCCC
Confidence 5789999999865
No 133
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.1e-39 Score=313.70 Aligned_cols=249 Identities=23% Similarity=0.340 Sum_probs=187.4
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHH-HHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELR-MLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~-~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+ .+..+++.||+|++.+.... ......+.+|.. +++.++||||+++++++... ..+|+
T Consensus 1 ~~lg~G~fg~V~~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~------~~~~l 73 (325)
T cd05602 1 KVIGKGSFGKVLLA-RHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA------DKLYF 73 (325)
T ss_pred CeeeeCCCeEEEEE-EECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC------CeEEE
Confidence 36899999999964 56778899999998643211 122233444544 56789999999999988654 45788
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
++|++ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-- 151 (325)
T cd05602 74 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-- 151 (325)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC--
Confidence 99888 6789888764 5689999999999999999999999999999999999999999999999999863211100
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.....+||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (325)
T cd05602 152 --------------------------------------------------------TTSTFCGTPEYLAPEVLHKQPYDR 175 (325)
T ss_pred --------------------------------------------------------CcccccCCccccCHHHHcCCCCCC
Confidence 011235778888888887777777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH----H
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE----Q 381 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~----e 381 (427)
.+|+||+|++++.|.++..+|.............. .+. .....+++++.+||.+||+.||.+|+++. +
T Consensus 176 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 176 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN-KPL-------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred ccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh-CCc-------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 88999999999988777666654322222222211 111 12245788999999999999999999876 8
Q ss_pred HhcCCCCCCC
Q psy8260 382 ALAHPYLSQY 391 (427)
Q Consensus 382 ~L~Hp~f~~~ 391 (427)
+++|+||...
T Consensus 248 i~~~~~~~~~ 257 (325)
T cd05602 248 IKNHIFFSPI 257 (325)
T ss_pred HhcCcccCCC
Confidence 9999999754
No 134
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6e-39 Score=314.19 Aligned_cols=260 Identities=19% Similarity=0.258 Sum_probs=189.7
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||+|+||.||.+ ....+++.||+|.+.+... .......+.+|+.++..++|+||+++++++... .
T Consensus 2 ~y~~~~~lG~G~fg~V~~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~ 74 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVV-KLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE------N 74 (332)
T ss_pred CceEEEEEEeCCCeEEEEE-EECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC------C
Confidence 4778899999999999964 4567889999999864221 122233466899999999999999999988654 4
Q ss_pred eEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.+|+++|++ +++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 75 ~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 75 NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 678999987 7899998865 5689999999999999999999999999999999999999999999999999864321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.... .....+||+.|+|||++..
T Consensus 155 ~~~~---------------------------------------------------------~~~~~~gt~~y~aPE~~~~ 177 (332)
T cd05623 155 DGTV---------------------------------------------------------QSSVAVGTPDYISPEILQA 177 (332)
T ss_pred CCcc---------------------------------------------------------eecccccCccccCHHHHhc
Confidence 1100 0011235555555555542
Q ss_pred -----ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 301 -----WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 301 -----~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
..+...+|+||+|++++.|.++..||..........+........ .+......++++++|||.+||+.+|.+
T Consensus 178 ~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---~~p~~~~~~s~~~~~li~~ll~~~~~r 254 (332)
T cd05623 178 MEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF---QFPAQVTDVSEDAKDLIRRLICSREHR 254 (332)
T ss_pred cccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc---cCCCccccCCHHHHHHHHHHccChhhh
Confidence 235567899999999998877766665432222222222111111 111223457899999999999776655
Q ss_pred --CCCHHHHhcCCCCCCC
Q psy8260 376 --RITAEQALAHPYLSQY 391 (427)
Q Consensus 376 --R~ta~e~L~Hp~f~~~ 391 (427)
|+|++|+++||||...
T Consensus 255 ~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 255 LGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred cCCCCHHHHhCCCCcCCC
Confidence 6899999999999864
No 135
>KOG0574|consensus
Probab=100.00 E-value=2.6e-41 Score=306.94 Aligned_cols=256 Identities=23% Similarity=0.377 Sum_probs=201.9
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|++...||+|+||+|+ .+.++.+|+.||||++... .+.+.+.+|+.+|++++.|.||++|+.|...
T Consensus 32 EEVFDi~~KLGEGSYGSV~-KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~------ 100 (502)
T KOG0574|consen 32 EEVFDIVGKLGEGSYGSVH-KAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKH------ 100 (502)
T ss_pred HHHHHHHHHhcCCcchHHH-HHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccC------
Confidence 4568999999999999999 4778999999999998542 3466788999999999999999999876543
Q ss_pred ceEEEEeccCC-CCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLMG-ADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~g-~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..+++|||||| |+..++++ ++.++++++..+++..+.||+|||...-||||||..|||++.+|.+||+|||+|....
T Consensus 101 sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT 180 (502)
T KOG0574|consen 101 SDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT 180 (502)
T ss_pred CceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhh
Confidence 35899999996 78999875 4679999999999999999999999999999999999999999999999999986543
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..+ ..+.+..|||.||||||+.
T Consensus 181 DTM----------------------------------------------------------AKRNTVIGTPFWMAPEVI~ 202 (502)
T KOG0574|consen 181 DTM----------------------------------------------------------AKRNTVIGTPFWMAPEVIE 202 (502)
T ss_pred hhH----------------------------------------------------------HhhCccccCcccccHHHHH
Confidence 221 1334567888888888888
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
...|....|+||||+..-+|..+.+|+.+-- . .+ .+...|..++..|++ ....|.++-|||++||.++|++|.||
T Consensus 203 EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH-P--MR-AIFMIPT~PPPTF~K-PE~WS~~F~DFi~~CLiK~PE~R~TA 277 (502)
T KOG0574|consen 203 EIGYDTKADIWSLGITAIEMAEGRPPYSDIH-P--MR-AIFMIPTKPPPTFKK-PEEWSSEFNDFIRSCLIKKPEERKTA 277 (502)
T ss_pred HhccchhhhHhhhcchhhhhhcCCCCccccc-c--cc-eeEeccCCCCCCCCC-hHhhhhHHHHHHHHHhcCCHHHHHHH
Confidence 7778888899999988877744444443211 0 01 112233333322221 12347889999999999999999999
Q ss_pred HHHhcCCCCCCCC
Q psy8260 380 EQALAHPYLSQYS 392 (427)
Q Consensus 380 ~e~L~Hp~f~~~~ 392 (427)
-++++|||+++-.
T Consensus 278 ~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 278 LRLCEHTFIKNAP 290 (502)
T ss_pred HHHhhhhhhcCCC
Confidence 9999999998653
No 136
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-39 Score=332.95 Aligned_cols=266 Identities=26% Similarity=0.280 Sum_probs=182.8
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccC--------------c-CCCHHHHHHHHHHHHHHhcCCCCCce
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIAR--------------P-FQSAVHAKRTYRELRMLKHMNHENVI 127 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~--------------~-~~~~~~~~~~~~Ei~~l~~l~HpnIv 127 (427)
.+.|.+.+.||+|+||.||.+.....++..+++|.+.. . .........+.+|+.+|++++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 35789999999999999998766554444444432110 0 11122344567999999999999999
Q ss_pred eeeeeeecCccccCCceEEEEeccCCCCHHHHHhhCC------CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEE
Q psy8260 128 GLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQK------LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201 (427)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~l~~~~------l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl 201 (427)
++++++... ...|+++++++++|..++.... .....++.++.||+.||.|||++|||||||||+|||+
T Consensus 227 ~l~~~~~~~------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl 300 (501)
T PHA03210 227 KIEEILRSE------ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL 300 (501)
T ss_pred cEeEEEEEC------CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 999998754 4578888888888887764432 3456778899999999999999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcc
Q psy8260 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTEN 281 (427)
Q Consensus 202 ~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~ 281 (427)
+.++.+||+|||+++........
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~--------------------------------------------------------- 323 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREA--------------------------------------------------------- 323 (501)
T ss_pred CCCCCEEEEeCCCceecCccccc---------------------------------------------------------
Confidence 99999999999998754321100
Q ss_pred ccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCH-HHHhhcCc--HHHHHHHhcC-------CC-------
Q psy8260 282 EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPA-EFMAKISS--DSARKYINSL-------PL------- 344 (427)
Q Consensus 282 ~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~-~~~~~~~~--~~~~~~~~~~-------~~------- 344 (427)
...+.+||+.|+|||++.+..+...+|+||+|++++.|.++.. ++...... ....+.+... +.
T Consensus 324 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 403 (501)
T PHA03210 324 FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFD 403 (501)
T ss_pred ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHH
Confidence 0112356777777777777667777899999998877643221 11111000 0111111100 00
Q ss_pred --------CCcccHHhhc--CCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 345 --------LTKKDFRQVF--KGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 345 --------~~~~~~~~~~--~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
.....+...+ ...+.++.++|.+||++||.+||||.|+|+||||...
T Consensus 404 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 404 YIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 0000111111 1346788999999999999999999999999999764
No 137
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7.3e-39 Score=312.05 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=186.5
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHH-HHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELR-MLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~-~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||. +.+..+|+.||+|++.+... .......+.+|.. +++.++||||+++++++... ..+|+
T Consensus 1 ~~lg~G~~g~Vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~------~~~~l 73 (321)
T cd05603 1 KVIGKGSFGKVLL-AKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA------EKLYF 73 (321)
T ss_pred CeeeeCCCEEEEE-EEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC------CEEEE
Confidence 3689999999996 45677899999999865322 1222334555654 67889999999999888653 46789
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
++|++ +++|...+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-- 151 (321)
T cd05603 74 VLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE-- 151 (321)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC--
Confidence 99988 6788776654 5689999999999999999999999999999999999999999999999999863211000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.....+||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (321)
T cd05603 152 --------------------------------------------------------TTSTFCGTPEYLAPEVLRKEPYDR 175 (321)
T ss_pred --------------------------------------------------------ccccccCCcccCCHHHhcCCCCCC
Confidence 111235777788888877766777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH----HH
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA----EQ 381 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta----~e 381 (427)
++|+||+|++++.|.++..+|............... +. ......+.++.+||.+||+.||.+|+++ .|
T Consensus 176 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (321)
T cd05603 176 TVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK-PL-------QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLE 247 (321)
T ss_pred cCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC-CC-------CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHH
Confidence 889999999999887776666443211111111111 10 1223567889999999999999999976 49
Q ss_pred HhcCCCCCCC
Q psy8260 382 ALAHPYLSQY 391 (427)
Q Consensus 382 ~L~Hp~f~~~ 391 (427)
+++||||...
T Consensus 248 ~~~~~~~~~~ 257 (321)
T cd05603 248 IKNHVFFSPI 257 (321)
T ss_pred HhCCCCcCCC
Confidence 9999999753
No 138
>KOG0577|consensus
Probab=100.00 E-value=4.3e-40 Score=321.48 Aligned_cols=257 Identities=22% Similarity=0.329 Sum_probs=193.5
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC-CCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF-QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
...|.-.+.||.|+||.||+ +.+..+.+.||||++.-.. ++...-..+++|++.|++++|||++.+.++|-..
T Consensus 25 Eklf~dLrEIGHGSFGAVYf-Ard~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre----- 98 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYF-ARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE----- 98 (948)
T ss_pred HHHHHHHHHhcCCccceeEE-eeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc-----
Confidence 34455557899999999997 5677899999999997543 3444567789999999999999999999887543
Q ss_pred CceEEEEeccCCCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...++|||||-|+-.+++. .+++-+.++..|+.+.+.||.|||+.+.||||||..|||+++.|.|||+|||.|....
T Consensus 99 -~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 99 -HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA 177 (948)
T ss_pred -chHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC
Confidence 3458999999777777764 4679999999999999999999999999999999999999999999999999875432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
...+++|||+|||||+|+.- +
T Consensus 178 -PAnsFvGTPywMAPEVILAM----------------------D------------------------------------ 198 (948)
T KOG0577|consen 178 -PANSFVGTPYWMAPEVILAM----------------------D------------------------------------ 198 (948)
T ss_pred -chhcccCCccccchhHheec----------------------c------------------------------------
Confidence 23445666666666665420 0
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHH-hcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYI-NSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
...|+.++|+||||+..-.|.-..+|...-+.-.....+. +..|.+....|+ ..+..|+..||++-|..|||
T Consensus 199 EGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS-------~~F~~Fvd~CLqKipqeRpt 271 (948)
T KOG0577|consen 199 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWS-------DYFRNFVDSCLQKIPQERPT 271 (948)
T ss_pred ccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhH-------HHHHHHHHHHHhhCcccCCc
Confidence 0126667899999987766644333332222111222222 234666665554 45689999999999999999
Q ss_pred HHHHhcCCCCCCCC
Q psy8260 379 AEQALAHPYLSQYS 392 (427)
Q Consensus 379 a~e~L~Hp~f~~~~ 392 (427)
++++|.|+|+..-+
T Consensus 272 se~ll~H~fv~R~R 285 (948)
T KOG0577|consen 272 SEELLKHRFVLRER 285 (948)
T ss_pred HHHHhhcchhccCC
Confidence 99999999997654
No 139
>KOG0690|consensus
Probab=100.00 E-value=4.1e-40 Score=301.99 Aligned_cols=258 Identities=24% Similarity=0.330 Sum_probs=207.1
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH-HHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV-HAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
.-.+|+..+.||+|.||.|.. +..+.+|+.+|||++++...-.. .....+.|-++|+..+||.+..|...|+..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL-~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~---- 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVIL-CREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ---- 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEE-EeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC----
Confidence 345688899999999999995 67888999999999877543322 234467899999999999999998777664
Q ss_pred CCceEEEEeccC-CCCHHH-HHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNN-ILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~-~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
..+++||+|. ||.|.- +-+...|+++.++.+...|+.||.|||+++||.||||.+|+|+|.+|++||+||||++..
T Consensus 241 --drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 241 --DRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred --ceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence 4688999988 677654 445677999999999999999999999999999999999999999999999999998742
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
-.. | ....++||||.|+||||+
T Consensus 319 I~~----------------------------------------------------g------~t~kTFCGTPEYLAPEVl 340 (516)
T KOG0690|consen 319 IKY----------------------------------------------------G------DTTKTFCGTPEYLAPEVL 340 (516)
T ss_pred ccc----------------------------------------------------c------ceeccccCChhhcCchhh
Confidence 110 0 134567888888888888
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI- 377 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~- 377 (427)
...-|+..+|||-+|+++|+|-.+..||..+........++.... ++.+.+|++|+.||..+|.+||++|+
T Consensus 341 eDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~--------kFPr~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 341 EDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL--------KFPRTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred ccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc--------cCCccCCHHHHHHHHHHhhcChHhhcC
Confidence 888888899999999999998888878876543333322221111 12356899999999999999999998
Q ss_pred ----CHHHHhcCCCCCCCC
Q psy8260 378 ----TAEQALAHPYLSQYS 392 (427)
Q Consensus 378 ----ta~e~L~Hp~f~~~~ 392 (427)
.|.|+++|+||....
T Consensus 413 gGpdDakEi~~h~FF~~v~ 431 (516)
T KOG0690|consen 413 GGPDDAKEIMRHRFFASVD 431 (516)
T ss_pred CCchhHHHHHhhhhhccCC
Confidence 589999999998654
No 140
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=6.9e-39 Score=313.66 Aligned_cols=260 Identities=18% Similarity=0.245 Sum_probs=190.9
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||+|+||.||.+ .+..+++.||+|.+.+... .......+.+|+.++..++|+||+++++++... .
T Consensus 2 ~y~i~~~lG~G~fg~V~~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~------~ 74 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVV-KMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE------N 74 (331)
T ss_pred CceEEEEEeeCCCeEEEEE-EECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------C
Confidence 5778899999999999964 5667899999999864221 122234466889999999999999999988654 4
Q ss_pred eEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..|++||++ |++|.+++.. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 75 ~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 75 YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 678999987 8899998864 4689999999999999999999999999999999999999999999999999864332
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.... ......||+.|+|||++.+
T Consensus 155 ~~~~---------------------------------------------------------~~~~~~gt~~y~aPE~~~~ 177 (331)
T cd05624 155 DGTV---------------------------------------------------------QSSVAVGTPDYISPEILQA 177 (331)
T ss_pred CCce---------------------------------------------------------eeccccCCcccCCHHHHhc
Confidence 1100 0001235555666665543
Q ss_pred -----ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 301 -----WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 301 -----~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
..+...+|+||+|++++.|.++..||..........+........ .+......++++++|||.+||+.++.+
T Consensus 178 ~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---~~p~~~~~~~~~~~~li~~ll~~~~~~ 254 (331)
T cd05624 178 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF---QFPSHITDVSEEAKDLIQRLICSRERR 254 (331)
T ss_pred cccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc---cCCCccccCCHHHHHHHHHHccCchhh
Confidence 234556799999999998877766664332222222222111111 122223457899999999999976655
Q ss_pred --CCCHHHHhcCCCCCCC
Q psy8260 376 --RITAEQALAHPYLSQY 391 (427)
Q Consensus 376 --R~ta~e~L~Hp~f~~~ 391 (427)
|++++++++||||...
T Consensus 255 ~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 255 LGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred cCCCCHHHHhcCCCcCCC
Confidence 5799999999999864
No 141
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.5e-38 Score=304.73 Aligned_cols=256 Identities=22% Similarity=0.294 Sum_probs=192.2
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
|++.+.||+|+||.||. +.+..+++.||||.+...... ......+.+|+.++++++|+||+.+++.+... ..
T Consensus 2 f~~~~~ig~G~~g~v~~-~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------~~ 74 (285)
T cd05630 2 FRQYRVLGKGGFGEVCA-CQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK------DA 74 (285)
T ss_pred ceeeEEeecCCCeEEEE-EEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC------CE
Confidence 56678899999999995 567778999999988653222 22234567899999999999999999887643 45
Q ss_pred EEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.+++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 78888877 7899887743 3589999999999999999999999999999999999999999999999998754221
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.. ...+..||+.|+|||++.+
T Consensus 155 ~~-----------------------------------------------------------~~~~~~g~~~y~aPE~~~~ 175 (285)
T cd05630 155 GQ-----------------------------------------------------------TIKGRVGTVGYMAPEVVKN 175 (285)
T ss_pred Cc-----------------------------------------------------------cccCCCCCccccChHHHcC
Confidence 10 0012246778888888877
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC--
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT-- 378 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t-- 378 (427)
..+..++|+||+|++++.+.++..||................... ........++++++||.+||+.||.+|+|
T Consensus 176 ~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ 251 (285)
T cd05630 176 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----QEEYSEKFSPDARSLCKMLLCKDPKERLGCQ 251 (285)
T ss_pred CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh----hhhcCccCCHHHHHHHHHHhhcCHHHccCCC
Confidence 777778899999999988866655554321111011110000000 01123456889999999999999999999
Q ss_pred ---HHHHhcCCCCCCC
Q psy8260 379 ---AEQALAHPYLSQY 391 (427)
Q Consensus 379 ---a~e~L~Hp~f~~~ 391 (427)
++|+++||||.+.
T Consensus 252 ~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 252 GGGAREVKEHPLFKQI 267 (285)
T ss_pred CCchHHHHcChhhhcc
Confidence 9999999999864
No 142
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.1e-38 Score=311.60 Aligned_cols=280 Identities=35% Similarity=0.583 Sum_probs=203.7
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc-----
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT----- 137 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~----- 137 (427)
.++|.+.+.||.|+||.||. +.+..+|+.||+|++..... ...+.+.+|+++++.++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~-~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFS-AVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEE-EEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 36788999999999999996 56778899999998865432 33455778999999999999999998875432
Q ss_pred ---cccCCceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-CCCEEEeeCC
Q psy8260 138 ---CLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFG 213 (427)
Q Consensus 138 ---~~~~~~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-~~~~kl~DFG 213 (427)
...+....|+++++++++|.+.+....+++..++.++.|++.||.|||++||+||||||+||+++. ++.+||+|||
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred ccccccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcc
Confidence 111234678999999889998888778999999999999999999999999999999999999974 5678999999
Q ss_pred CCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 214 LARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 214 la~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
+++........ . .......|+..|+
T Consensus 161 ~~~~~~~~~~~-~------------------------------------------------------~~~~~~~~~~~y~ 185 (342)
T cd07854 161 LARIVDPHYSH-K------------------------------------------------------GYLSEGLVTKWYR 185 (342)
T ss_pred cceecCCcccc-c------------------------------------------------------ccccccccccccc
Confidence 98643211000 0 0001123566788
Q ss_pred chHHhhh-ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCC----------------------CCCcccH
Q psy8260 294 APEIMLN-WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP----------------------LLTKKDF 350 (427)
Q Consensus 294 APEvl~~-~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~ 350 (427)
|||++.. ..+..++|+||+|++++.+-++..+|................+ .......
T Consensus 186 aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (342)
T cd07854 186 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPL 265 (342)
T ss_pred CHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCH
Confidence 8887643 3455678999999999877555544432211111111111111 1111223
Q ss_pred HhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC
Q psy8260 351 RQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTS 400 (427)
Q Consensus 351 ~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~ 400 (427)
.......+.++++||.+||+.||.+|||++|+|+||||..+..|...+.+
T Consensus 266 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~~~~~~ 315 (342)
T cd07854 266 RDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEPVS 315 (342)
T ss_pred HHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCCccccCC
Confidence 33445678999999999999999999999999999999987666555544
No 143
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.5e-38 Score=310.54 Aligned_cols=267 Identities=18% Similarity=0.238 Sum_probs=188.3
Q ss_pred eccccCcc--cccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 68 IGPTLSKE--SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 68 ~~~~lg~g--~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
+.+.||+| +|+.||. +.++.+|+.||||++............+.+|+.+++.++||||++++++|..+ ...
T Consensus 2 ~~~~ig~G~~~~~~v~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~------~~~ 74 (327)
T cd08227 2 LLTVIGRGFEDLMTVNL-ARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD------NEL 74 (327)
T ss_pred hhhhccccccceEEEEE-EeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC------CEE
Confidence 45788999 6677875 56778999999999876544444455667899999999999999999998654 457
Q ss_pred EEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
+++++++ +++|.+++.. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++++|||.+......
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~ 154 (327)
T cd08227 75 WVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINH 154 (327)
T ss_pred EEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence 8888888 6789888753 35899999999999999999999999999999999999999999999999865422110
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
..... ...+ ......++..|+|||++.+.
T Consensus 155 ~~~~~------------------------------------------~~~~---------~~~~~~~~~~y~aPE~~~~~ 183 (327)
T cd08227 155 GQRLR------------------------------------------VVHD---------FPKYSVKVLPWLSPEVLQQN 183 (327)
T ss_pred ccccc------------------------------------------cccc---------ccccccceecccChHHhhcc
Confidence 00000 0000 00112456779999998753
Q ss_pred --cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc-CCCC---------------------------------
Q psy8260 302 --MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS-LPLL--------------------------------- 345 (427)
Q Consensus 302 --~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~--------------------------------- 345 (427)
.+..++|+||+|++++.+.++..+|............... .+..
T Consensus 184 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (327)
T cd08227 184 LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTP 263 (327)
T ss_pred cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCc
Confidence 4667789999999998885554444321111100000000 0000
Q ss_pred ----CcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q psy8260 346 ----TKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYS 392 (427)
Q Consensus 346 ----~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 392 (427)
............++++.+||.+||++||++|||++|+++||||++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 264 RPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred CccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00000112234578899999999999999999999999999998753
No 144
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-38 Score=303.74 Aligned_cols=253 Identities=21% Similarity=0.267 Sum_probs=185.6
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH-HHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEec
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV-HAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e 150 (427)
||+|+||.||. +.+..+|+.||+|++........ .......|++++++++||||++++++|... ..+|++||
T Consensus 1 lg~G~~g~Vy~-~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~------~~~~lv~e 73 (277)
T cd05607 1 LGKGGFGEVCA-VQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK------THLCLVMS 73 (277)
T ss_pred CCCCCceEEEE-EEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC------CeEEEEEe
Confidence 68999999995 45667899999999864322211 223445799999999999999999988653 45788998
Q ss_pred cC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccc
Q psy8260 151 LM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 226 (427)
Q Consensus 151 ~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 226 (427)
++ |++|...+.. ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 74 ~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---- 149 (277)
T cd05607 74 LMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---- 149 (277)
T ss_pred cCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc----
Confidence 88 7889877643 358889999999999999999999999999999999999999999999999876432110
Q ss_pred ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCC
Q psy8260 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306 (427)
Q Consensus 227 gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~ 306 (427)
......||+.|+|||++.+..+..+
T Consensus 150 -------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~ 174 (277)
T cd05607 150 -------------------------------------------------------TITQRAGTNGYMAPEILKEEPYSYP 174 (277)
T ss_pred -------------------------------------------------------eeeccCCCCCccCHHHHccCCCCCc
Confidence 0011246777888888877777778
Q ss_pred CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH----HHH
Q psy8260 307 TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA----EQA 382 (427)
Q Consensus 307 ~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta----~e~ 382 (427)
+|+||+|++++.+.++..+|.................. ..........+++++|||++||++||.+|+|+ +++
T Consensus 175 ~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 175 VDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE---DEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc---cccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 89999999998886655555322111111111111000 00001123568899999999999999999999 778
Q ss_pred hcCCCCCCCCC
Q psy8260 383 LAHPYLSQYSD 393 (427)
Q Consensus 383 L~Hp~f~~~~~ 393 (427)
++||||.....
T Consensus 252 ~~h~~f~~~~~ 262 (277)
T cd05607 252 RKHEFFKTINF 262 (277)
T ss_pred hcChhhcCCCH
Confidence 89999987543
No 145
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.8e-38 Score=310.20 Aligned_cols=251 Identities=20% Similarity=0.311 Sum_probs=188.9
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+ .+..+++.||+|++.+.... ......+.+|+.++.++ +||||+++++++... ..+|+
T Consensus 1 ~~lG~G~~g~V~~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~------~~~~l 73 (327)
T cd05617 1 RVIGRGSYAKVLLV-RLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT------SRLFL 73 (327)
T ss_pred CeeeeCCCeEEEEE-EECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC------CEEEE
Confidence 36899999999964 56678999999998754322 23345567899998888 699999999988653 46789
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
++|++ +++|...+.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 74 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-- 151 (327)
T cd05617 74 VIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD-- 151 (327)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC--
Confidence 99988 7899877654 5799999999999999999999999999999999999999999999999998863211000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.....+||+.|+|||++.+..+..
T Consensus 152 --------------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ 175 (327)
T cd05617 152 --------------------------------------------------------TTSTFCGTPNYIAPEILRGEEYGF 175 (327)
T ss_pred --------------------------------------------------------ceecccCCcccCCHHHHCCCCCCc
Confidence 011235777788888877777777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCc------HHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISS------DSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
++|+||+|++++.|.++..||...... ..........+. ......++.+.+||.+||+.||++|+++
T Consensus 176 ~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 176 SVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-------RIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred hheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-------CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 889999999998886666555321100 011111111110 1223468899999999999999999984
Q ss_pred ------HHHhcCCCCCCCC
Q psy8260 380 ------EQALAHPYLSQYS 392 (427)
Q Consensus 380 ------~e~L~Hp~f~~~~ 392 (427)
+++++||||....
T Consensus 249 ~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 249 QPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred CCCCCHHHHHcCCCCCCCC
Confidence 6999999998653
No 146
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-38 Score=325.84 Aligned_cols=256 Identities=21% Similarity=0.284 Sum_probs=195.2
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.+|+|+||.||.+.....+++.||+|.+... .......+.+|+.+|+.++|||||+++++|... .
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~------~ 138 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSD------D 138 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC------C
Confidence 44889999999999999976544444788999987543 333344567899999999999999999998654 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.+|++||++ |++|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 139 ~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~ 218 (478)
T PTZ00267 139 KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQ 218 (478)
T ss_pred EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCcee
Confidence 689999998 7899877642 3589999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
....... ......+||+.|+|||+
T Consensus 219 ~~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE~ 242 (478)
T PTZ00267 219 YSDSVSL--------------------------------------------------------DVASSFCGTPYYLAPEL 242 (478)
T ss_pred cCCcccc--------------------------------------------------------ccccccCCCccccCHhH
Confidence 3221100 01123457888888888
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
+.+..+..++|+||+|++++.|.++..||................. ......+++++++||.+||+.||++||
T Consensus 243 ~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-------~~~~~~~s~~~~~li~~~L~~dP~~Rp 315 (478)
T PTZ00267 243 WERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-------DPFPCPVSSGMKALLDPLLSKNPALRP 315 (478)
T ss_pred hCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-------CCCCccCCHHHHHHHHHHhccChhhCc
Confidence 8777777788999999999888666555532211111222211111 011234678999999999999999999
Q ss_pred CHHHHhcCCCCCC
Q psy8260 378 TAEQALAHPYLSQ 390 (427)
Q Consensus 378 ta~e~L~Hp~f~~ 390 (427)
|++|+++|||+..
T Consensus 316 s~~~~l~~~~~~~ 328 (478)
T PTZ00267 316 TTQQLLHTEFLKY 328 (478)
T ss_pred CHHHHHhCHHHHH
Confidence 9999999999863
No 147
>KOG0579|consensus
Probab=100.00 E-value=4.4e-40 Score=323.28 Aligned_cols=258 Identities=23% Similarity=0.403 Sum_probs=192.1
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
+..|+|...||-|+||.||+ +.++.++...|.|+|.. .+....+.++-||.||..++||+||+|++.|...
T Consensus 31 ~d~WeIiGELGDGAFGKVyK-A~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~e------ 101 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYK-AVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE------ 101 (1187)
T ss_pred HHHHHHHhhhcCccchhhhh-hhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc------
Confidence 34577778899999999995 56778888889998854 3556677888999999999999999999887654
Q ss_pred ceEEEEeccC-CCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
+.++|+.++| ||....++- ...+.+++++.+++|++.||.|||+++|||||||..|||++-+|.++|+|||++....
T Consensus 102 nkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 102 NKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK 181 (1187)
T ss_pred CceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch
Confidence 3567777888 556666553 4679999999999999999999999999999999999999999999999999874321
Q ss_pred ---CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 220 ---NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 220 ---~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
....+++||++|||||++.. |
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmC--------------------------------------------------------E 205 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMC--------------------------------------------------------E 205 (1187)
T ss_pred hHHhhhccccCCcccccchheee--------------------------------------------------------c
Confidence 23345667777777776431 1
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCC--CCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP--LLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
.+...+|+.+.||||||+.+-.|...-+|-..-..-.-..+...+-| ...+..| +..+.|||.+||..||.
T Consensus 206 T~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~W-------s~~F~DfLk~cL~Knp~ 278 (1187)
T KOG0579|consen 206 TFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHW-------SRSFSDFLKRCLVKNPR 278 (1187)
T ss_pred cccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchh-------hhHHHHHHHHHHhcCCc
Confidence 11234577788999999988777443322221111111122222222 2233333 55788999999999999
Q ss_pred CCCCHHHHhcCCCCCCCC
Q psy8260 375 KRITAEQALAHPYLSQYS 392 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f~~~~ 392 (427)
.||++.|+|+||||....
T Consensus 279 ~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 279 NRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred cCCCHHHHhhCcccccCC
Confidence 999999999999998643
No 148
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.6e-38 Score=302.57 Aligned_cols=266 Identities=34% Similarity=0.546 Sum_probs=193.0
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC---HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS---AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
|++.+.||.|+||.||.+ .+..+|+.||||++...... ......+.+|+.+++.++|+||+++++++...
T Consensus 2 y~~~~~lg~g~~~~vy~~-~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 74 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKA-RDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK------ 74 (298)
T ss_pred ceeeeeeeeccccEEEEE-EECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC------
Confidence 567788999999999965 45667999999998654332 22334466899999999999999999998653
Q ss_pred ceEEEEeccCCCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLMGADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
...++++++++++|.+++... .+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 75 ~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 75 SNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred CEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 467899999999999998764 499999999999999999999999999999999999999999999999999864322
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... ......+++.|+|||++.+
T Consensus 155 ~~~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 176 (298)
T cd07841 155 PNR----------------------------------------------------------KMTHQVVTRWYRAPELLFG 176 (298)
T ss_pred CCc----------------------------------------------------------cccccccceeeeCHHHHhC
Confidence 100 0011234556677776643
Q ss_pred c-cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcC--------------------CCCCcccHHhhcCCCCh
Q psy8260 301 W-MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSL--------------------PLLTKKDFRQVFKGANP 359 (427)
Q Consensus 301 ~-~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~s~ 359 (427)
. .+...+|+|++|++++.+.++..+|......+...+..... ...........+...+.
T Consensus 177 ~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (298)
T cd07841 177 ARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASD 256 (298)
T ss_pred CCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccH
Confidence 2 24456799999988877654433222211111111111100 00111122334456688
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPND 396 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~ 396 (427)
++++||.+||++||++|+|++|+++||||.+...|..
T Consensus 257 ~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 257 DALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 9999999999999999999999999999998765543
No 149
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4e-38 Score=334.24 Aligned_cols=166 Identities=23% Similarity=0.382 Sum_probs=137.0
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
..|.+.+.||+|+||.||.+ .+..+++.||||++..... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a-~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~------ 76 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLG-RKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA------ 76 (669)
T ss_pred CCEEEEEEEecCCCeEEEEE-EECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC------
Confidence 45788899999999999964 5667899999999865322 233445677899999999999999999887543
Q ss_pred ceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..+|++|+++ |++|.+++.. +.+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+++....
T Consensus 77 ~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~ 156 (669)
T cd05610 77 NNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN 156 (669)
T ss_pred CEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccC
Confidence 4689999988 7899998864 5689999999999999999999999999999999999999999999999999986532
Q ss_pred ---Ccccccccccccchhh
Q psy8260 221 ---EMTGYVATRWYRAPEI 236 (427)
Q Consensus 221 ---~~~~~~gt~~y~aPE~ 236 (427)
......+|+.|++||.
T Consensus 157 ~~~~~~~~~~t~~~~~pe~ 175 (669)
T cd05610 157 RELNMMDILTTPSMAKPKN 175 (669)
T ss_pred CcccccccccCccccCccc
Confidence 2234567777777763
No 150
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.3e-37 Score=302.11 Aligned_cols=296 Identities=22% Similarity=0.274 Sum_probs=208.6
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||.|+||.||. +.+..+++.||+|.+....... ...+.+.+|+++++.++||||+++++.+... .
T Consensus 2 ~y~~~~~ig~g~~g~vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~ 74 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFL-VRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE------T 74 (316)
T ss_pred ceEEeeeecCCccEEEEE-EEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC------C
Confidence 467888999999999996 4566689999999987643332 3445678999999999999999999887643 4
Q ss_pred eEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..|++++++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++....
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 75 YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 578888877 7799998864 468999999999999999999999999999999999999999999999999987543
Q ss_pred CCccccc-ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 220 NEMTGYV-ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 220 ~~~~~~~-gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
....... ........+.. .......+. ...........||..|+|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~-----~~~~~~~~~~~g~~~y~aPE~~ 204 (316)
T cd05574 155 VEPPPVSKALRKGSRRSSV-------------------------NSIPSETFS-----EEPSFRSNSFVGTEEYIAPEVI 204 (316)
T ss_pred ccccccccccccccccccc-------------------------cccchhhhc-----ccccCCCCCCcCccCCcCHHHH
Confidence 2211000 00000000000 000000000 0001122346789999999999
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
.+..+...+|+||+|++++.+.++..+|..........+.......... ....++++.+||.+||+.||++|+|
T Consensus 205 ~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 205 SGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPG------SPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred cCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCC------ccccCHHHHHHHHHHccCCHhHCCC
Confidence 8877777889999999998886666665433222222222211111111 1226789999999999999999999
Q ss_pred ----HHHHhcCCCCCCCCCCCCCCCCCCC
Q psy8260 379 ----AEQALAHPYLSQYSDPNDEPTSPPY 403 (427)
Q Consensus 379 ----a~e~L~Hp~f~~~~~~~~~~~~~~~ 403 (427)
++|+|+||||.+...+.....++|.
T Consensus 279 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 307 (316)
T cd05574 279 SKRGAAEIKQHPFFRGVNWALIRHTTPPI 307 (316)
T ss_pred chhhHHHHHcCchhhcCChhhcccCCCCC
Confidence 9999999999986655444444333
No 151
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.4e-39 Score=302.64 Aligned_cols=254 Identities=30% Similarity=0.496 Sum_probs=186.8
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++++.||+|+||.||. +.+..+++.||+|++..............+|+.++++++||||+++++++... ...
T Consensus 1 y~~~~~lg~G~~g~v~~-~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~------~~~ 73 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYK-AKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD------NYL 73 (260)
T ss_dssp EEEEEEEEEESSEEEEE-EEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES------SEE
T ss_pred CEEeEEEEeCCCEEEEE-EEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc------ccc
Confidence 56788999999999995 56777889999999976543333333446799999999999999999998653 467
Q ss_pred EEEeccCCC-CHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 146 YMVTHLMGA-DLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 146 ~lv~e~~g~-~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
+++++++.+ +|.+++. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+.......
T Consensus 74 ~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~- 152 (260)
T PF00069_consen 74 YIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN- 152 (260)
T ss_dssp EEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 889988855 9999887 6789999999999999999999999999999999999999999999999999986321000
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh-hcc
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML-NWM 302 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~-~~~ 302 (427)
.......+|+.|+|||++. +..
T Consensus 153 ---------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 175 (260)
T PF00069_consen 153 ---------------------------------------------------------ENFNPFVGTPEYMAPEVLQQGKK 175 (260)
T ss_dssp ---------------------------------------------------------SEBSSSSSSGGGSCHHHHTTTSS
T ss_pred ---------------------------------------------------------ccccccccccccccccccccccc
Confidence 0111234566667777665 555
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhh---cCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQV---FKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
...++|+||+|++++.|.++..++................. ...... .....+++.+||.+||+.||++|||+
T Consensus 176 ~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~ 251 (260)
T PF00069_consen 176 YTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILK----RPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSA 251 (260)
T ss_dssp BSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHH----THHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTH
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhccc----ccccccccccchhHHHHHHHHHHHccCChhHCcCH
Confidence 66677999999999777554443332200001100000000 000000 01123789999999999999999999
Q ss_pred HHHhcCCCC
Q psy8260 380 EQALAHPYL 388 (427)
Q Consensus 380 ~e~L~Hp~f 388 (427)
.|+++||||
T Consensus 252 ~~l~~~~~~ 260 (260)
T PF00069_consen 252 EELLKHPWF 260 (260)
T ss_dssp HHHHTSGGG
T ss_pred HHHhcCCCC
Confidence 999999997
No 152
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.9e-38 Score=334.27 Aligned_cols=264 Identities=22% Similarity=0.314 Sum_probs=197.4
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
+...+.|.+.+.||.|+||.||. +.+..++..||+|.+............+.+|+.+|+.++|||||+++++|...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYL-Akdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de--- 84 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFL-VKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK--- 84 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEE-EEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---
Confidence 44557899999999999999996 55677899999999876544555566788999999999999999999988542
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhc-------CceeccCCCCCeEEcCC--
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSA-------GIIHRDLKPSNIAVNED-- 204 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~-------~iiHrDLKp~NILl~~~-- 204 (427)
....+|++|||+ +++|.+++.. ..+++..+..++.||+.||.|||+. +||||||||+|||++.+
T Consensus 85 -~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 85 -ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred -CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 224688999988 6799888753 4699999999999999999999984 49999999999999642
Q ss_pred ---------------CCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhh
Q psy8260 205 ---------------CELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELK 269 (427)
Q Consensus 205 ---------------~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~k 269 (427)
+.+||+|||+++......
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s----------------------------------------------- 196 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIES----------------------------------------------- 196 (1021)
T ss_pred ccccccccccccCCCCceEEccCCccccccccc-----------------------------------------------
Confidence 347888888876432110
Q ss_pred hhccCCCCCCccccccccccccccchHHhhhc--cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCc
Q psy8260 270 ILDFGLARPTENEMTGYVATRWYRAPEIMLNW--MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTK 347 (427)
Q Consensus 270 i~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~--~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (427)
......||+.|+|||++.+. .+..++|+||||+|++.|.++..||............+...+..+
T Consensus 197 ------------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp- 263 (1021)
T PTZ00266 197 ------------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP- 263 (1021)
T ss_pred ------------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC-
Confidence 01123466777777776432 355678999999999988777666643221111111111112111
Q ss_pred ccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q psy8260 348 KDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 348 ~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
....++++.+||.+||++||.+|||+.|+|.||||.....|
T Consensus 264 ------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~p 304 (1021)
T PTZ00266 264 ------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGPP 304 (1021)
T ss_pred ------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCCC
Confidence 13457899999999999999999999999999999866443
No 153
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3e-38 Score=301.59 Aligned_cols=258 Identities=32% Similarity=0.542 Sum_probs=187.1
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++.+.||.|+||.||++ .+..+|+.||||++............+.+|++++++++||||+++++++... ...
T Consensus 2 y~~~~~l~~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~ 74 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKA-RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE------NKL 74 (284)
T ss_pred ceeeeeecCCCceEEEEE-EECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC------CcE
Confidence 567788999999999964 5667899999998865433333335677899999999999999999987643 457
Q ss_pred EEEeccCCCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 146 YMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
+++++++.++|..++.. ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||+++......
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 75 YLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred EEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 89999998888887753 458999999999999999999999999999999999999999999999999886432211
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
.. .....+++.|+|||++.+..
T Consensus 155 ~~----------------------------------------------------------~~~~~~~~~y~aPE~~~~~~ 176 (284)
T cd07860 155 RT----------------------------------------------------------YTHEVVTLWYRAPEILLGCK 176 (284)
T ss_pred cc----------------------------------------------------------cccccccccccCCeEEecCC
Confidence 00 00112345566666554322
Q ss_pred -CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHH---------------------HhcCCCCCcccHHhhcCCCChh
Q psy8260 303 -HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY---------------------INSLPLLTKKDFRQVFKGANPQ 360 (427)
Q Consensus 303 -~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~s~~ 360 (427)
+...+|+|++|++++.+.++..+|..........+. ....+......+....+.++++
T Consensus 177 ~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (284)
T cd07860 177 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDED 256 (284)
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHH
Confidence 344579999998887775544333211100011111 1111222223334445567899
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 361 AIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 361 ~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
++|||.+||+.||++|||++|+++||||
T Consensus 257 ~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 257 GRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999999998
No 154
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.2e-37 Score=305.43 Aligned_cols=302 Identities=35% Similarity=0.630 Sum_probs=211.3
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~ 141 (427)
.+.|.+.+.+|.|+||.||++ .+..+|..||||++............+.+|+.+++++ +||||+++++++... +
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~-~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~----~ 80 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKA-IDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE----N 80 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEE-EEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC----C
Confidence 456888899999999999964 5667899999998865443444455677899999999 999999999987542 2
Q ss_pred CceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 142 FKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 142 ~~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
....|+++++++++|..++..+.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 81 DKDIYLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred CceEEEEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 24579999999889999887778899999999999999999999999999999999999999999999999998754321
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN- 300 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~- 300 (427)
.... +. | ......||+.|+|||++.+
T Consensus 161 ~~~~-~~-----~-----------------------------------------------~~~~~~~~~~y~aPE~~~~~ 187 (337)
T cd07852 161 EENP-EN-----P-----------------------------------------------VLTDYVATRWYRAPEILLGS 187 (337)
T ss_pred cccc-cC-----c-----------------------------------------------chhcccccccccCceeeecc
Confidence 1100 00 0 0112235666777776543
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHH-----------------------HHHhcCCCCCcccHHhhcCCC
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSAR-----------------------KYINSLPLLTKKDFRQVFKGA 357 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~ 357 (427)
..+...+|+||+|++++.+.++..+|.......... ..................+..
T Consensus 188 ~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (337)
T cd07852 188 TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKA 267 (337)
T ss_pred ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCC
Confidence 234456799999988877755444332111111000 111111112222233444557
Q ss_pred ChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC-CCCCcc-cccCCCCHHHHHHHHh
Q psy8260 358 NPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPNDEPTS-PPYDQS-FEDMDLPVDQWKGTYS 422 (427)
Q Consensus 358 s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~ 422 (427)
++++.+||.+||+.||++|||+.++++||||.+...+..++.. .++... ..+..+++.+....+.
T Consensus 268 ~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (337)
T cd07852 268 SDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDEPVLPYPITIPLDDNVKLSVAEYRNKLY 334 (337)
T ss_pred CHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCCCCCCCCccCCccccceeeHHHHHhhhh
Confidence 8899999999999999999999999999999988766555332 111111 2344566666555443
No 155
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.1e-37 Score=297.58 Aligned_cols=256 Identities=32% Similarity=0.532 Sum_probs=187.5
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.+|.|+||.||++ .+..+|+.||+|++............+.+|+.+++.++||||+++++++... ...
T Consensus 2 y~~~~~l~~g~~~~v~~~-~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~~ 74 (286)
T cd07832 2 YKILGRIGEGAHGIVFKA-KDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG------SGF 74 (286)
T ss_pred ceEEeecccCCCcEEEEE-EECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC------Cee
Confidence 678899999999999964 4566799999999876543344456688999999999999999999998653 457
Q ss_pred EEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC--
Q psy8260 146 YMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE-- 221 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~-- 221 (427)
|+++++++++|.+++.. ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 75 VLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 89999999999998754 45899999999999999999999999999999999999999999999999998754332
Q ss_pred --cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 222 --MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 222 --~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.....++.+|+|||+ +.
T Consensus 155 ~~~~~~~~~~~y~aPE~-------------------------------------------------------------~~ 173 (286)
T cd07832 155 RLYSHQVATRWYRAPEL-------------------------------------------------------------LY 173 (286)
T ss_pred CccccccCcccccCcee-------------------------------------------------------------ee
Confidence 112234444555554 33
Q ss_pred hc-cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc----------------------CCCCCcccHHhhcCC
Q psy8260 300 NW-MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS----------------------LPLLTKKDFRQVFKG 356 (427)
Q Consensus 300 ~~-~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~ 356 (427)
+. .+..++|+|++|++++.+-++..+|............... .+......+...++.
T Consensus 174 ~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (286)
T cd07832 174 GARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPD 253 (286)
T ss_pred ccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCC
Confidence 22 1344567777777776664443322111100111010000 011112223445566
Q ss_pred CChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q psy8260 357 ANPQAIDLLSLMLELDSEKRITAEQALAHPYLS 389 (427)
Q Consensus 357 ~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~ 389 (427)
.+.++.+||.+||++||.+|||++|+|+||||.
T Consensus 254 ~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 254 ASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 788999999999999999999999999999984
No 156
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.4e-37 Score=294.89 Aligned_cols=256 Identities=18% Similarity=0.338 Sum_probs=187.2
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcccc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~ 140 (427)
..+.|.+.+.+|+|+||.||.+ .+..+++.||+|.+..... ....+.+|+.+++++ +||||+++++++.......
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~-~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKG-RHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEE-EEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 3467888899999999999965 4567889999999865422 234567899999998 7999999999986543222
Q ss_pred CCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
....+|+++|++ +++|.+++.. ..+++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 234678999988 5789988764 358999999999999999999999999999999999999999999999999987
Q ss_pred CCCCC---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 217 PTENE---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 217 ~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
..... ..... |++.|+
T Consensus 160 ~~~~~~~~~~~~~-------------------------------------------------------------g~~~y~ 178 (272)
T cd06637 160 QLDRTVGRRNTFI-------------------------------------------------------------GTPYWM 178 (272)
T ss_pred ecccccccCCccc-------------------------------------------------------------cccccc
Confidence 53221 11223 444455
Q ss_pred chHHhhh-----ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHh
Q psy8260 294 APEIMLN-----WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLM 368 (427)
Q Consensus 294 APEvl~~-----~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~m 368 (427)
|||++.. ..+...+|+||+|++++.|.++..+|............. ..+. .. ......+.++.|||.+|
T Consensus 179 aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~-~~~~---~~--~~~~~~~~~~~~li~~~ 252 (272)
T cd06637 179 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP-RNPA---PR--LKSKKWSKKFQSFIESC 252 (272)
T ss_pred CHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh-cCCC---CC--CCCCCcCHHHHHHHHHH
Confidence 5555431 224556899999999988866655553221111111111 1110 00 01123567899999999
Q ss_pred cCCCCCCCCCHHHHhcCCCC
Q psy8260 369 LELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 369 L~~dP~~R~ta~e~L~Hp~f 388 (427)
|+.||.+|||++|+++||||
T Consensus 253 l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 253 LVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred cCCChhhCCCHHHHhhCCCC
Confidence 99999999999999999998
No 157
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.5e-37 Score=298.45 Aligned_cols=265 Identities=27% Similarity=0.468 Sum_probs=189.5
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|++.+.||.|+||.||. +.+..+|+.||||++............+.+|+.+++.+. ||||+++++++..... ....
T Consensus 2 ~y~~~~~lg~g~~g~vy~-~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~-~~~~ 79 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYK-ARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK-NGKP 79 (295)
T ss_pred CceEeeEecccCCeEEEE-EEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC-CCCc
Confidence 477889999999999996 456678999999987654332223355778999999995 6999999998764321 1123
Q ss_pred eEEEEeccCCCCHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-CCCEEEeeCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFGLAR 216 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-~~~~kl~DFGla~ 216 (427)
..|++++++.++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||+|||+++
T Consensus 80 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 80 SLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred eEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 4789999998888887643 24799999999999999999999999999999999999998 8899999999886
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
....... ......+++.|+|||
T Consensus 160 ~~~~~~~----------------------------------------------------------~~~~~~~~~~~~aPE 181 (295)
T cd07837 160 AFSIPVK----------------------------------------------------------SYTHEIVTLWYRAPE 181 (295)
T ss_pred ecCCCcc----------------------------------------------------------ccCCcccccCCCChH
Confidence 4321100 001113456677777
Q ss_pred Hhhh-ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc--------------------CCCCCcccHHhhcC
Q psy8260 297 IMLN-WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS--------------------LPLLTKKDFRQVFK 355 (427)
Q Consensus 297 vl~~-~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 355 (427)
++.+ ..+..++|+|++|++++.|.++..+|..........+.... .+...........+
T Consensus 182 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (295)
T cd07837 182 VLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVP 261 (295)
T ss_pred HhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhcc
Confidence 6654 23456679999999998775554444321111111111110 11111122233345
Q ss_pred CCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q psy8260 356 GANPQAIDLLSLMLELDSEKRITAEQALAHPYLS 389 (427)
Q Consensus 356 ~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~ 389 (427)
..++++.+||.+||++||.+|||++|+|+||||.
T Consensus 262 ~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 262 DLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred ccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 6789999999999999999999999999999984
No 158
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.1e-37 Score=292.12 Aligned_cols=256 Identities=21% Similarity=0.323 Sum_probs=192.7
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH---HHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA---VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~---~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
.|.+++.||.|++|.||.+ .+..+++.||+|.+....... .....+.+|++++++++||||+++++++...
T Consensus 3 ~~~~~~~lg~g~~~~vy~~-~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 76 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLC-YDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD----- 76 (263)
T ss_pred cccccceecCCCceEEEEE-EEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC-----
Confidence 4788999999999999964 566789999999886432221 2234577899999999999999999998654
Q ss_pred CceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...+++++++ +++|.+.+.. ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++...
T Consensus 77 -~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 77 -ETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred -CeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 3678888887 6789887754 568999999999999999999999999999999999999999999999999986432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
...... .......|+..|+|||++.
T Consensus 156 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~ 180 (263)
T cd06625 156 TICSSG-------------------------------------------------------TGMKSVTGTPYWMSPEVIS 180 (263)
T ss_pred cccccc-------------------------------------------------------ccccCCCcCccccCcceec
Confidence 110000 0001224567788888877
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
+..+..++|+||+|++++.+-++..+|............... .. ........++++.+||.+||..||.+|||+
T Consensus 181 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 254 (263)
T cd06625 181 GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ-PT-----NPQLPSHVSPDARNFLRRTFVENAKKRPSA 254 (263)
T ss_pred cCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhcc-CC-----CCCCCccCCHHHHHHHHHHhhcCcccCCCH
Confidence 766777889999999998886665555432111111111111 10 011223568899999999999999999999
Q ss_pred HHHhcCCCC
Q psy8260 380 EQALAHPYL 388 (427)
Q Consensus 380 ~e~L~Hp~f 388 (427)
.|+++||||
T Consensus 255 ~~ll~~~~~ 263 (263)
T cd06625 255 EELLRHFFV 263 (263)
T ss_pred HHHhhCCCC
Confidence 999999997
No 159
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.2e-37 Score=294.44 Aligned_cols=259 Identities=27% Similarity=0.491 Sum_probs=186.9
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|++...+|.|+||.||++ .+..+|+.||+|++..........+.+.+|+.+++.++||||+++++++... ..
T Consensus 2 ~y~~~~~l~~g~~~~v~~~-~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~~ 74 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKC-RNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK------RK 74 (286)
T ss_pred ceeeeeeecccCCeEEEEE-EECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC------CE
Confidence 4778889999999999964 5667899999998864432222334567899999999999999999988653 45
Q ss_pred EEEEeccCC-CCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 145 VYMVTHLMG-ADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 145 ~~lv~e~~g-~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
.++++|++. +.|..+... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 75 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 75 LHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred EEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 789999885 455555543 468999999999999999999999999999999999999999999999999986543211
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-c
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN-W 301 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~-~ 301 (427)
. ......++..|+|||++.+ .
T Consensus 155 ~----------------------------------------------------------~~~~~~~~~~~~aPE~~~~~~ 176 (286)
T cd07847 155 D----------------------------------------------------------DYTDYVATRWYRAPELLVGDT 176 (286)
T ss_pred c----------------------------------------------------------cccCcccccccCCHHHHhCCC
Confidence 0 0001124556666666554 2
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc----------------------CCC-CCcccHHhhcCCCC
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS----------------------LPL-LTKKDFRQVFKGAN 358 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~~~~~~s 358 (427)
.+..++|+||+|++++.+.++..+|......+........ .+. .........+..++
T Consensus 177 ~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (286)
T cd07847 177 QYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNIS 256 (286)
T ss_pred CcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCC
Confidence 3455789999999998885554444322111111000000 000 01112233455678
Q ss_pred hhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 359 PQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 359 ~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
+.+.|||.+||+.||++|||+.|++.||||
T Consensus 257 ~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 257 SPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 999999999999999999999999999998
No 160
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.7e-37 Score=299.19 Aligned_cols=261 Identities=22% Similarity=0.314 Sum_probs=191.1
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|++.+.||+|+||.||.+ .+..+|..||+|.+.... ......++.+|++++++++||||+++++.|... ..
T Consensus 2 ~~~~~~~lg~G~~g~v~~~-~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 73 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKV-LHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD------GE 73 (308)
T ss_pred CceEEeeccCCCCeEEEEE-EEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC------CE
Confidence 4778899999999999965 566789999999886432 333455678999999999999999999988654 46
Q ss_pred EEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
+++++|++ +++|.++++. ..+++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++......
T Consensus 74 ~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 74 ISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred EEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 78999987 6799998864 568999999999999999999997 59999999999999999999999999987543211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
. .....|++.|+|||++.+.
T Consensus 154 ~------------------------------------------------------------~~~~~~~~~~~aPE~~~~~ 173 (308)
T cd06615 154 M------------------------------------------------------------ANSFVGTRSYMSPERLQGT 173 (308)
T ss_pred c------------------------------------------------------------cccCCCCcCccChhHhcCC
Confidence 0 0122456667777776655
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCC-CCc-----------------ccHH------------
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPL-LTK-----------------KDFR------------ 351 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------------~~~~------------ 351 (427)
.+..++|+|++|++++.+.++..+|...... ........... ... ....
T Consensus 174 ~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (308)
T cd06615 174 HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPP 252 (308)
T ss_pred CCCccchHHHHHHHHHHHHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCc
Confidence 5666789999999988775554444221111 11111100000 000 0000
Q ss_pred h-hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q psy8260 352 Q-VFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 352 ~-~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
. .....++++++||.+||..||++|||++|+++||||.+...+
T Consensus 253 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 296 (308)
T cd06615 253 KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELE 296 (308)
T ss_pred cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence 0 011257789999999999999999999999999999875433
No 161
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1e-37 Score=297.66 Aligned_cols=254 Identities=20% Similarity=0.338 Sum_probs=187.1
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|++.+.||.|+||.||.+ .+..+++.||+|.+.... .......+.+|++++++++||||+++++.+... ..
T Consensus 2 ~~~~~~~lg~g~~~~v~~~-~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 73 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKA-YHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVE------NR 73 (279)
T ss_pred cchheeeeccCCCeEEEEE-EEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC------CE
Confidence 3566788999999999964 566789999999886542 333445678999999999999999999998654 35
Q ss_pred EEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 145 VYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
.++++|++ +++|... ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.+||+|||++.......
T Consensus 74 ~~lv~e~~~~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~- 149 (279)
T cd06619 74 ISICTEFMDGGSLDVY---RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI- 149 (279)
T ss_pred EEEEEecCCCCChHHh---hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-
Confidence 67888888 5666543 357899999999999999999999999999999999999999999999999986432110
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
.....||+.|+|||++.+..+
T Consensus 150 -----------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~ 170 (279)
T cd06619 150 -----------------------------------------------------------AKTYVGTNAYMAPERISGEQY 170 (279)
T ss_pred -----------------------------------------------------------ccCCCCChhhcCceeecCCCC
Confidence 012245666777777666667
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHH---HHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDS---ARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
..++|+|++|++++.+.++..||........ ................ .....++++++||.+||+.||.+|||++
T Consensus 171 ~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 248 (279)
T cd06619 171 GIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVL--PVGQFSEKFVHFITQCMRKQPKERPAPE 248 (279)
T ss_pred CCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCC--CCCcCCHHHHHHHHHHhhCChhhCCCHH
Confidence 7788999999999877555554432111100 0000000000000000 1123678999999999999999999999
Q ss_pred HHhcCCCCCCC
Q psy8260 381 QALAHPYLSQY 391 (427)
Q Consensus 381 e~L~Hp~f~~~ 391 (427)
|+++||||.+.
T Consensus 249 eil~~~~~~~~ 259 (279)
T cd06619 249 NLMDHPFIVQY 259 (279)
T ss_pred HHhcCcccccc
Confidence 99999999865
No 162
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.8e-37 Score=297.04 Aligned_cols=256 Identities=20% Similarity=0.285 Sum_probs=190.4
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
|...+.||+|+||.||.+ .+..+++.||+|.+....... .....+.+|+++|+.++|+||+.+++.|..+ ..
T Consensus 2 ~~~~~~lg~G~~g~vy~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------~~ 74 (285)
T cd05632 2 FRQYRVLGKGGFGEVCAC-QVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK------DA 74 (285)
T ss_pred ceEEEEEecCCCeEEEEE-EECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC------CE
Confidence 455678999999999964 566789999999886532222 2234467899999999999999999887653 45
Q ss_pred EEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.+++++++ +++|...+.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE 154 (285)
T ss_pred EEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence 78888877 6788876643 3599999999999999999999999999999999999999999999999998753221
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.. ...+..|++.|+|||++.+
T Consensus 155 ~~-----------------------------------------------------------~~~~~~g~~~~~aPE~~~~ 175 (285)
T cd05632 155 GE-----------------------------------------------------------SIRGRVGTVGYMAPEVLNN 175 (285)
T ss_pred CC-----------------------------------------------------------cccCCCCCcCccChHHhcC
Confidence 10 0112246777888887776
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC--
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT-- 378 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t-- 378 (427)
..+...+|+||+|++++.+.++..||.................... .......++++.+||.+||+.||++|+|
T Consensus 176 ~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 176 QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE----EVYSAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc----cccCccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 6677788999999999888666655543211111111111111100 0122446788999999999999999999
Q ss_pred ---HHHHhcCCCCCCC
Q psy8260 379 ---AEQALAHPYLSQY 391 (427)
Q Consensus 379 ---a~e~L~Hp~f~~~ 391 (427)
++++++||||...
T Consensus 252 ~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 252 EEGAGEVKRHPFFRNM 267 (285)
T ss_pred ccChHHHHcChhhhcC
Confidence 8999999999875
No 163
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.7e-37 Score=297.97 Aligned_cols=262 Identities=31% Similarity=0.487 Sum_probs=188.1
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||.|+||.||.+ .+..+++.||+|.+............+.+|+.++++++||||+++++++.... ..
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRA-RDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN----LD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEE-EECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC----CC
Confidence 35778899999999999964 56678999999998654333333345678999999999999999999876431 24
Q ss_pred eEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..|+++++++++|.+++.. ..+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 80 KIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred cEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 6899999998899888754 34899999999999999999999999999999999999999999999999988754322
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
... .....+++.|+|||++.+.
T Consensus 160 ~~~----------------------------------------------------------~~~~~~~~~~~aPE~~~~~ 181 (293)
T cd07843 160 LKP----------------------------------------------------------YTQLVVTLWYRAPELLLGA 181 (293)
T ss_pred ccc----------------------------------------------------------cccccccccccCchhhcCC
Confidence 100 0011245556666665443
Q ss_pred c-CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh--------------cCCC--------CCcccHHhhcCC--
Q psy8260 302 M-HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN--------------SLPL--------LTKKDFRQVFKG-- 356 (427)
Q Consensus 302 ~-~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~--------------~~~~--------~~~~~~~~~~~~-- 356 (427)
. ....+|+||+|++++.|.++..+|..........+... ..+. .....+.+.++.
T Consensus 182 ~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (293)
T cd07843 182 KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALS 261 (293)
T ss_pred ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccC
Confidence 2 34567999999888777554433322111111111110 0000 111112223333
Q ss_pred CChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 357 ANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 357 ~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
.++.+.|||.+||+.||++|||++|+|+||||
T Consensus 262 ~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 262 LSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred CChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 48889999999999999999999999999998
No 164
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.7e-37 Score=289.44 Aligned_cols=252 Identities=25% Similarity=0.352 Sum_probs=190.5
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++.+.+|+|++|.||.+ .+..+++.||+|++..........+.+.+|++++++++|+|++++++.+... ...+
T Consensus 2 y~~~~~lg~g~~~~v~~~-~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLV-RHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE-----DGLL 75 (257)
T ss_pred ceEEEEecCCCCeEEEEE-EEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-----CCEE
Confidence 678889999999999964 4567889999999865444444555678899999999999999999876532 1347
Q ss_pred EEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
|++++++ +++|.+.++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 8899887 6789888754 34899999999999999999999999999999999999999999999999988643211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. ......|++.|+|||++.+.
T Consensus 156 ~~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 177 (257)
T cd08223 156 CD----------------------------------------------------------MASTLIGTPYYMSPELFSNK 177 (257)
T ss_pred CC----------------------------------------------------------ccccccCCcCccChhHhcCC
Confidence 00 01122466778888887776
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHH
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQ 381 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e 381 (427)
.+..++|+||+|++++.+.++..+|................ . .......++++.+||.+||+.||.+|||+.+
T Consensus 178 ~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 250 (257)
T cd08223 178 PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK--L-----PPMPKDYSPELGELIATMLSKRPEKRPSVKS 250 (257)
T ss_pred CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC--C-----CCCccccCHHHHHHHHHHhccCcccCCCHHH
Confidence 67778899999999988855544443211111111111111 0 0112346789999999999999999999999
Q ss_pred HhcCCCC
Q psy8260 382 ALAHPYL 388 (427)
Q Consensus 382 ~L~Hp~f 388 (427)
+++||||
T Consensus 251 ~l~~~~~ 257 (257)
T cd08223 251 ILRQPYI 257 (257)
T ss_pred HhcCCCC
Confidence 9999997
No 165
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.4e-37 Score=298.76 Aligned_cols=270 Identities=28% Similarity=0.427 Sum_probs=188.2
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc--ccC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC--LAD 141 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~ 141 (427)
+.|.+.+.||.|+||.||. +.+..+++.||||++..............+|++++++++||||+++++++..... ...
T Consensus 12 ~~y~~~~~lg~g~~~~v~~-~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFK-ARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hheEEEEEeecCCCEEEEE-EEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 4588899999999999996 4566789999999886443222223445689999999999999999998754321 112
Q ss_pred CceEEEEeccCCCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLMGADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
....++++|+++++|.+.+... .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++....
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 3457999999998998887654 68999999999999999999999999999999999999999999999999987542
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
...... .....+..++..|+|||++.
T Consensus 171 ~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~~~ 196 (310)
T cd07865 171 LSKNSK------------------------------------------------------PNRYTNRVVTLWYRPPELLL 196 (310)
T ss_pred CCcccC------------------------------------------------------CCCccCcccCccccCcHHhc
Confidence 211000 00111234566777777765
Q ss_pred hcc-CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHH---HHHhc-------------------CCCCCcccHHh-h-c
Q psy8260 300 NWM-HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSAR---KYINS-------------------LPLLTKKDFRQ-V-F 354 (427)
Q Consensus 300 ~~~-~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~---~~~~~-------------------~~~~~~~~~~~-~-~ 354 (427)
+.. +..++|+||+|++++.|.++..++.......... ..... .+......... . .
T Consensus 197 ~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 276 (310)
T cd07865 197 GERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKP 276 (310)
T ss_pred CCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhccc
Confidence 433 4556799999988877744333221111000000 00000 00000000111 0 0
Q ss_pred CCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 355 KGANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 355 ~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
...++.++|||.+||+.||.+|||++|+|+||||
T Consensus 277 ~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 277 YVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred ccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 1236788999999999999999999999999998
No 166
>KOG0596|consensus
Probab=100.00 E-value=5.3e-38 Score=305.58 Aligned_cols=271 Identities=25% Similarity=0.345 Sum_probs=198.6
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTC 138 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~ 138 (427)
.+....|++.+.||+||-..||+. +. ...+.||+|++.....+.....-+..|+.+|.+| .|.+||+|+++-.++
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV-~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d-- 432 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKV-LN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD-- 432 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeee-ec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC--
Confidence 344566888999999999999964 32 4557889988876555666677788999999999 689999999985543
Q ss_pred ccCCceEEEEeccCCCCHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 139 LADFKNVYMVTHLMGADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 139 ~~~~~~~~lv~e~~g~~L~~~l~~~~--l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
..+|||||+-..||.++|+.+. .+.-.++.|..|++.|++++|.+||||.||||.|+|+- .|.+||+|||+|.
T Consensus 433 ----~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~ 507 (677)
T KOG0596|consen 433 ----GYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIAN 507 (677)
T ss_pred ----ceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhc
Confidence 5789999999999999998654 34348899999999999999999999999999999987 4799999999999
Q ss_pred CCCCCcc-----cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccc
Q psy8260 217 PTENEMT-----GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291 (427)
Q Consensus 217 ~~~~~~~-----~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~ 291 (427)
....+.+ +.+||..||+||.+......... +..
T Consensus 508 aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~-------------------~~~----------------------- 545 (677)
T KOG0596|consen 508 AIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSREN-------------------GKS----------------------- 545 (677)
T ss_pred ccCccccceeeccccCcccccCHHHHhhccccccC-------------------CCc-----------------------
Confidence 8766544 45899999999988642111000 000
Q ss_pred ccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh-cCCCCCcccHHhhcCCCChhHHHHHHHhcC
Q psy8260 292 YRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN-SLPLLTKKDFRQVFKGANPQAIDLLSLMLE 370 (427)
Q Consensus 292 Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~ 370 (427)
.+....++|+||||||+|.|..+..||-.-... ..++.. ..|.. ...|..+. -..+++|+++.||.
T Consensus 546 --------k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~--~aKl~aI~~P~~-~Iefp~~~--~~~~li~~mK~CL~ 612 (677)
T KOG0596|consen 546 --------KIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ--IAKLHAITDPNH-EIEFPDIP--ENDELIDVMKCCLA 612 (677)
T ss_pred --------ceeecCccchhhhhhHHHHHHhcCCchHHHHHH--HHHHHhhcCCCc-cccccCCC--CchHHHHHHHHHHh
Confidence 112345689999999999996665555332100 011111 11111 11121111 12349999999999
Q ss_pred CCCCCCCCHHHHhcCCCCCCCCCC
Q psy8260 371 LDSEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 371 ~dP~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
+||+||+|+.++|+|||+....-|
T Consensus 613 rdPkkR~si~eLLqhpFl~~~~i~ 636 (677)
T KOG0596|consen 613 RDPKKRWSIPELLQHPFLQIQPIP 636 (677)
T ss_pred cCcccCCCcHHHhcCccccccccc
Confidence 999999999999999999764433
No 167
>KOG1035|consensus
Probab=100.00 E-value=2.8e-38 Score=330.81 Aligned_cols=278 Identities=26% Similarity=0.368 Sum_probs=202.3
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc-----
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT----- 137 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~----- 137 (427)
..+|+....||+||||.||+ +.++-+|+.||||+|.... +.....+++||+.+|.+|+|||||+++..|....
T Consensus 478 ~~DFEEL~lLGkGGFG~Vvk-VRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVK-VRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEE-EeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 45677888999999999995 7788999999999998665 5566677899999999999999999886542110
Q ss_pred -------------c----------------------------------c--------------------cC---------
Q psy8260 138 -------------C----------------------------------L--------------------AD--------- 141 (427)
Q Consensus 138 -------------~----------------------------------~--------------------~~--------- 141 (427)
+ . ++
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0 0 00
Q ss_pred --------------------------------CceEEEEeccCCC-CHHHHHhhCCCC--HHHHHHHHHHHHHHHHHHHh
Q psy8260 142 --------------------------------FKNVYMVTHLMGA-DLNNILRTQKLS--DDHVQFLVYQILRGLKYIHS 186 (427)
Q Consensus 142 --------------------------------~~~~~lv~e~~g~-~L~~~l~~~~l~--~~~~~~~~~qi~~aL~yLH~ 186 (427)
...+||-|+||.. .+.++++.+.+. ...+.++++||++||.|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0347899999964 556677777664 67788999999999999999
Q ss_pred cCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccc
Q psy8260 187 AGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDC 266 (427)
Q Consensus 187 ~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 266 (427)
+|||||||||.||++++++.|||+|||+|........ .+
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~------------~~----------------------------- 754 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLE------------SI----------------------------- 754 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhh------------hH-----------------------------
Confidence 9999999999999999999999999999975211000 00
Q ss_pred hhhhhccCCCC-CCccccccccccccccchHHhhhcc---CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcC
Q psy8260 267 ELKILDFGLAR-PTENEMTGYVATRWYRAPEIMLNWM---HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSL 342 (427)
Q Consensus 267 ~~ki~d~g~~~-~~~~~~~~~~gt~~Y~APEvl~~~~---~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
..+..+.+.-. ......++.+||-.|+|||++.+.. |..+.|++|||+|+++|..|-..-+... ..-.-++ .
T Consensus 755 d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa---~iL~~LR-~ 830 (1351)
T KOG1035|consen 755 DQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERA---SILTNLR-K 830 (1351)
T ss_pred hhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHH---HHHHhcc-c
Confidence 00000000000 1112467899999999999998877 6778899999999999977722111111 1111111 2
Q ss_pred CCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q psy8260 343 PLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLS 389 (427)
Q Consensus 343 ~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~ 389 (427)
+.++.. ..++...-+....+|..||+.||+|||||.|+|++.||-
T Consensus 831 g~iP~~--~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 831 GSIPEP--ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred CCCCCC--cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 222221 334555667888999999999999999999999999985
No 168
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.7e-37 Score=296.78 Aligned_cols=260 Identities=19% Similarity=0.203 Sum_probs=183.3
Q ss_pred cCcceeeccccCcccccEEEEeEEe---------------CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALD---------------SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~---------------~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnI 126 (427)
..+.|.+.+.||+|+||.||.+... ..++..||+|.+.... .......+.+|+++|.+++||||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCe
Confidence 4567888999999999999976532 1234579999886532 33345567899999999999999
Q ss_pred eeeeeeeecCccccCCceEEEEeccC-CCCHHHHHhhC--------------------CCCHHHHHHHHHHHHHHHHHHH
Q psy8260 127 IGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ--------------------KLSDDHVQFLVYQILRGLKYIH 185 (427)
Q Consensus 127 v~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~--------------------~l~~~~~~~~~~qi~~aL~yLH 185 (427)
+++++++... ...++++|++ +++|.+++... .+++..+..++.||+.||.|||
T Consensus 82 v~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 155 (304)
T cd05096 82 IRLLGVCVDE------DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS 155 (304)
T ss_pred eEEEEEEecC------CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999988653 3578899887 78998887542 2566788899999999999999
Q ss_pred hcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCccccccccc
Q psy8260 186 SAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNED 265 (427)
Q Consensus 186 ~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 265 (427)
++||+||||||+|||++.++.+||+|||+++.........
T Consensus 156 ~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~---------------------------------------- 195 (304)
T cd05096 156 SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR---------------------------------------- 195 (304)
T ss_pred HCCccccCcchhheEEcCCccEEECCCccceecccCceeE----------------------------------------
Confidence 9999999999999999999999999999986432210000
Q ss_pred chhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHh--CCCCHHHHhhcCcHHHHHHHhcCC
Q psy8260 266 CELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLP 343 (427)
Q Consensus 266 ~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~l--g~~~~~~~~~~~~~~~~~~~~~~~ 343 (427)
......++..|+|||++....+..++|+||+|++++.+ +.+..++.................
T Consensus 196 ----------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~ 259 (304)
T cd05096 196 ----------------IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFR 259 (304)
T ss_pred ----------------ecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhh
Confidence 00112346678888888777777888999999999775 333333322111111111100000
Q ss_pred CCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 344 LLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 344 ~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
..............++.+.+||.+||+.||++|||++|+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 260 DQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred hccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 00000000112345678999999999999999999999943
No 169
>KOG1989|consensus
Probab=100.00 E-value=9.7e-38 Score=320.21 Aligned_cols=265 Identities=23% Similarity=0.316 Sum_probs=194.4
Q ss_pred ccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCc
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNT 137 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~ 137 (427)
-++....+.|.+.|-+|||+.||. +.+...|..||+|++-.. +....+.+.+||++|+.|+ |+|||.+++......
T Consensus 32 ~~Vg~~~v~V~~vLAEGGFa~VYl-a~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~ 108 (738)
T KOG1989|consen 32 FTVGSHRVTVEKVLAEGGFAQVYL-AQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINR 108 (738)
T ss_pred EEECCEEEEEEEEEccCCcEEEEE-EEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccc
Confidence 367778899999999999999996 455566699999998653 5666778889999999995 999999999422111
Q ss_pred cccC-CceEEEEeccCC-CCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCCeEEcCCCCEEEe
Q psy8260 138 CLAD-FKNVYMVTHLMG-ADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNEDCELKIL 210 (427)
Q Consensus 138 ~~~~-~~~~~lv~e~~g-~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~--iiHrDLKp~NILl~~~~~~kl~ 210 (427)
.... .-.++|.||||. +.|-+++.. .+|++.++.+|++|+++|+.+||... |||||||-|||||+.+|..|||
T Consensus 109 ~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLC 188 (738)
T KOG1989|consen 109 SSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLC 188 (738)
T ss_pred cCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeC
Confidence 1111 346889999995 799888853 46999999999999999999999987 9999999999999999999999
Q ss_pred eCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccc
Q psy8260 211 DFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR 290 (427)
Q Consensus 211 DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~ 290 (427)
|||.|.......+ .+=|+-. -+ ..+ .+--|+
T Consensus 189 DFGSatt~~~~~~--------~~~e~~~------------------------ve----------------~eI-~k~TTp 219 (738)
T KOG1989|consen 189 DFGSATTKILSPT--------SAQEVNY------------------------VE----------------EEI-EKYTTP 219 (738)
T ss_pred cccccccccCCCc--------cHHHHHH------------------------HH----------------HHH-HhhCCc
Confidence 9998863221110 0001100 00 001 122477
Q ss_pred cccchHHh---hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHH
Q psy8260 291 WYRAPEIM---LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSL 367 (427)
Q Consensus 291 ~Y~APEvl---~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~ 367 (427)
.|+|||++ ++.+.+.++|||+|||++|.|.+...||...-. ..+++..-.++ -++.++..+++||..
T Consensus 220 ~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P------~~p~ys~~l~~LI~~ 289 (738)
T KOG1989|consen 220 QYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFP------PFPNYSDRLKDLIRT 289 (738)
T ss_pred cccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCC------CCccHHHHHHHHHHH
Confidence 88888876 355677889999999999999777666643200 01111111111 124578899999999
Q ss_pred hcCCCCCCCCCHHHHhcC
Q psy8260 368 MLELDSEKRITAEQALAH 385 (427)
Q Consensus 368 mL~~dP~~R~ta~e~L~H 385 (427)
||+.||.+||++-|++.+
T Consensus 290 mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 290 MLQPNPDERPNIYQVLEE 307 (738)
T ss_pred HhccCcccCCCHHHHHHH
Confidence 999999999999997654
No 170
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.5e-37 Score=297.75 Aligned_cols=278 Identities=31% Similarity=0.471 Sum_probs=197.5
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc--c
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL--A 140 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~--~ 140 (427)
.+.|.+.+.||.|+||.||.+ .+..+++.||||++..............+|+++++.++||||+++++++...... .
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKA-RQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEE-EECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 367889999999999999965 4667899999998865433222234467899999999999999999887543221 2
Q ss_pred CCceEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
....++++++++++++...+.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 3346799999998888877653 46999999999999999999999999999999999999999999999999998754
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
........ .+.. ..........|++.|+|||++
T Consensus 166 ~~~~~~~~------~~~~-----------------------------------------~~~~~~~~~~~~~~y~aPE~~ 198 (311)
T cd07866 166 DGPPPNPK------GGGG-----------------------------------------GGTRKYTNLVVTRWYRPPELL 198 (311)
T ss_pred cCCCcccc------cCCc-----------------------------------------ccccccccceeccCcCChHHh
Confidence 32110000 0000 000012344678889999987
Q ss_pred hhc-cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh--------------cCCC--------CCcccHHhhcC
Q psy8260 299 LNW-MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN--------------SLPL--------LTKKDFRQVFK 355 (427)
Q Consensus 299 ~~~-~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~--------------~~~~--------~~~~~~~~~~~ 355 (427)
.+. .+..++|+||+|++++.|.++..+|.............. ..+. .........+.
T Consensus 199 ~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (311)
T cd07866 199 LGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFG 278 (311)
T ss_pred hCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcc
Confidence 653 356678999999999877555433322111111111110 0000 01112233445
Q ss_pred CCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 356 GANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 356 ~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
..++++.|||.+||+.||.+|||+.|+++||||
T Consensus 279 ~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 279 KLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred cCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 567889999999999999999999999999998
No 171
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.5e-37 Score=295.42 Aligned_cols=259 Identities=28% Similarity=0.482 Sum_probs=184.3
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||.|++|.||.+ .+..+++.||||.+...... .....+.+|+++++.++||||+++++++... .
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~-~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~ 76 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKG-RSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTK------K 76 (291)
T ss_pred cceeEEEEEeecCCeEEEEE-EEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecC------C
Confidence 45788899999999999965 56678999999998643221 1223456899999999999999999998654 4
Q ss_pred eEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..|+++|+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 77 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 77 TLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred eEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 6799999998899888754 35899999999999999999999999999999999999999999999999998643211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN- 300 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~- 300 (427)
... .....++..|+|||++.+
T Consensus 157 ~~~----------------------------------------------------------~~~~~~~~~~~aPE~~~~~ 178 (291)
T cd07844 157 SKT----------------------------------------------------------YSNEVVTLWYRPPDVLLGS 178 (291)
T ss_pred Ccc----------------------------------------------------------ccccccccccCCcHHhhcC
Confidence 000 001123455666666543
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHHHhc----------------------CCCCCcccHHhhcCCC
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKYINS----------------------LPLLTKKDFRQVFKGA 357 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~~~~----------------------~~~~~~~~~~~~~~~~ 357 (427)
..+...+|+||+|++++.+-++..+|...... +......+. .+..............
T Consensus 179 ~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (291)
T cd07844 179 TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRL 258 (291)
T ss_pred cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCC
Confidence 22445678888888887664443333211100 000000000 0001111122222344
Q ss_pred C--hhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 358 N--PQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 358 s--~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
+ +++.+||.+||+.||.+|||+.|+|+||||
T Consensus 259 ~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 259 DRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 5 889999999999999999999999999998
No 172
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.2e-37 Score=294.81 Aligned_cols=264 Identities=33% Similarity=0.514 Sum_probs=189.2
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.|++.+.||+|++|.||++ .+..+|+.||+|.+............+.+|+++++.++||||+++++++... .
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~-~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 74 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKA-RDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE------K 74 (294)
T ss_pred CceEEEEEecCCCCEEEEEE-EecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC------C
Confidence 35778899999999999965 4566899999998865433333345577899999999999999999998643 4
Q ss_pred eEEEEeccCCCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-CCCEEEeeCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFGLARPTE 219 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-~~~~kl~DFGla~~~~ 219 (427)
..|+++|+++++|.+.+... .+++..+..++.||+.||+|||++|++||||||+||+++. ++.+||+|||++....
T Consensus 75 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 75 RLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred eEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 68999999988888776432 3578888999999999999999999999999999999985 5679999999986432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..... .....+++.|+|||++.
T Consensus 155 ~~~~~----------------------------------------------------------~~~~~~~~~y~~PE~~~ 176 (294)
T PLN00009 155 IPVRT----------------------------------------------------------FTHEVVTLWYRAPEILL 176 (294)
T ss_pred CCccc----------------------------------------------------------cccCceeecccCHHHHh
Confidence 21100 01123455666666654
Q ss_pred hc-cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc---------------------CCCCCcccHHhhcCCC
Q psy8260 300 NW-MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS---------------------LPLLTKKDFRQVFKGA 357 (427)
Q Consensus 300 ~~-~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~ 357 (427)
+. .+..++|+||+|++++.+.++..+|......+...+.... .+...........+..
T Consensus 177 ~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (294)
T PLN00009 177 GSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTL 256 (294)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCC
Confidence 42 2455679999999988775544443221111111111110 1111111222233567
Q ss_pred ChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q psy8260 358 NPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYS 392 (427)
Q Consensus 358 s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 392 (427)
++++.+||.+||+.||++|||++++++||||.+..
T Consensus 257 ~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 257 EPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred ChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 89999999999999999999999999999998653
No 173
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.1e-37 Score=290.45 Aligned_cols=255 Identities=19% Similarity=0.336 Sum_probs=187.1
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.+.|.+.+.||.|+||.||. +.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++.+...
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~-~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~------ 78 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYK-ARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR------ 78 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEE-EEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC------
Confidence 35678889999999999996 4566789999999886432 22334567899999999999999999987643
Q ss_pred ceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..+|+++|++ +++|.+++.. +.+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 79 DKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 4578899988 5799988754 5699999999999999999999999999999999999999999999999998764321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh-
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML- 299 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~- 299 (427)
... ......||+.|+|||++.
T Consensus 159 ~~~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 180 (267)
T cd06645 159 TIA----------------------------------------------------------KRKSFIGTPYWMAPEVAAV 180 (267)
T ss_pred ccc----------------------------------------------------------ccccccCcccccChhhhcc
Confidence 100 001123555666666653
Q ss_pred --hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 300 --NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 300 --~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
...+..++|+||+|++++.+.++..++............. ........+.. ....+..+.+||.+||+.||.+||
T Consensus 181 ~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~ 257 (267)
T cd06645 181 ERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT--KSNFQPPKLKD-KMKWSNSFHHFVKMALTKNPKKRP 257 (267)
T ss_pred ccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh--ccCCCCCcccc-cCCCCHHHHHHHHHHccCCchhCc
Confidence 2235557899999999998866655553321111111111 11111111111 113567899999999999999999
Q ss_pred CHHHHhcCCC
Q psy8260 378 TAEQALAHPY 387 (427)
Q Consensus 378 ta~e~L~Hp~ 387 (427)
|++++++|||
T Consensus 258 ~~~~ll~~~~ 267 (267)
T cd06645 258 TAEKLLQHPF 267 (267)
T ss_pred CHHHHhcCCC
Confidence 9999999998
No 174
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.5e-37 Score=296.22 Aligned_cols=258 Identities=22% Similarity=0.439 Sum_probs=193.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
+.....||.|+||.||. +.+..++..||||++... .....+.+.+|+.+++.++||||+++++.+... ...
T Consensus 24 ~~~~~~lg~g~~g~v~~-~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~------~~~ 94 (292)
T cd06658 24 LDSFIKIGEGSTGIVCI-ATEKHTGKQVAVKKMDLR--KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG------DEL 94 (292)
T ss_pred HhhhhcccCCCCeEEEE-EEECCCCCEEEEEEEecc--hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC------CeE
Confidence 44456799999999996 456678899999988543 233445678999999999999999999887643 457
Q ss_pred EEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccc
Q psy8260 146 YMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 224 (427)
|+++|++ +++|.+++....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 95 ~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~- 173 (292)
T cd06658 95 WVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP- 173 (292)
T ss_pred EEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-
Confidence 8889888 67898888777899999999999999999999999999999999999999999999999998764321100
Q ss_pred ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCC
Q psy8260 225 YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHY 304 (427)
Q Consensus 225 ~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~ 304 (427)
......|++.|+|||++.+..+.
T Consensus 174 ---------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 196 (292)
T cd06658 174 ---------------------------------------------------------KRKSLVGTPYWMAPEVISRLPYG 196 (292)
T ss_pred ---------------------------------------------------------cCceeecCccccCHHHHccCCCC
Confidence 00122466777777777666667
Q ss_pred CCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 305 NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 305 ~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
..+|+||+|++++.+-++..+|................+... ......++...+||.+||+.||.+|||++|+++
T Consensus 197 ~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 197 TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV-----KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc-----ccccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 778999999999888665555543221111111111111100 011246788999999999999999999999999
Q ss_pred CCCCCCCCCCC
Q psy8260 385 HPYLSQYSDPN 395 (427)
Q Consensus 385 Hp~f~~~~~~~ 395 (427)
||||.....|.
T Consensus 272 ~~~~~~~~~~~ 282 (292)
T cd06658 272 HPFLKLAGPPS 282 (292)
T ss_pred ChhhhccCCcc
Confidence 99998765554
No 175
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.8e-36 Score=284.47 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=192.8
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.+|+|+||.||.+ .+..+|+.||+|.+............+.+|+++++.++||||+++++.+... ...
T Consensus 2 ~~~~~~l~~g~~~~v~~~-~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~ 74 (256)
T cd08529 2 FEILNKIGKGSFGVVFKV-VRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK------GKL 74 (256)
T ss_pred ceEeEEecCCCCeEEEEE-EEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC------CEE
Confidence 567788999999999965 4567899999999865544555667788999999999999999999987643 457
Q ss_pred EEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
|++++++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.....
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred EEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 8888877 7899988865 46889999999999999999999999999999999999999999999999988643221
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. ......|++.|+|||++.+.
T Consensus 155 ~~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 176 (256)
T cd08529 155 TN----------------------------------------------------------FANTIVGTPYYLSPELCEDK 176 (256)
T ss_pred cc----------------------------------------------------------hhhccccCccccCHHHhcCC
Confidence 00 00122456778888887776
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHH
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQ 381 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e 381 (427)
.+...+|+||+|++++.+.++..||................ .......+++++.++|.+||+.||++||++.|
T Consensus 177 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 249 (256)
T cd08529 177 PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-------FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQ 249 (256)
T ss_pred CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------CCCCccccCHHHHHHHHHHccCCcccCcCHHH
Confidence 67778899999999988866655553322111112111111 01111246788999999999999999999999
Q ss_pred HhcCCCC
Q psy8260 382 ALAHPYL 388 (427)
Q Consensus 382 ~L~Hp~f 388 (427)
+++|||+
T Consensus 250 ll~~~~~ 256 (256)
T cd08529 250 LLRNPSL 256 (256)
T ss_pred HhhCCCC
Confidence 9999995
No 176
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=9.9e-37 Score=290.98 Aligned_cols=261 Identities=20% Similarity=0.343 Sum_probs=187.2
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcccc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~ 140 (427)
..+.|++.+.+|.|+||.||.+ .+..+++.||+|.+... ......+..|+.+++++ +||||+++++++.......
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~-~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKG-RHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEE-EEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 3467888899999999999965 45678999999987542 22334567899999888 7999999999985432222
Q ss_pred CCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
.....|+++|++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 335678999988 5689888754 348888899999999999999999999999999999999999999999999986
Q ss_pred CCCCC---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 217 PTENE---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 217 ~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
..... .....|+..|+|||++.....
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~l~~~~~--------------------------------------------------- 198 (282)
T cd06636 170 QLDRTVGRRNTFIGTPYWMAPEVIACDEN--------------------------------------------------- 198 (282)
T ss_pred hhhccccCCCcccccccccCHhhcCcccC---------------------------------------------------
Confidence 43221 112334444444444321000
Q ss_pred chHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 294 APEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 294 APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
....+..++|+||+|++++.+.++..+|................+ . .......++++.+||.+||+.||
T Consensus 199 -----~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~li~~cl~~~p 267 (282)
T cd06636 199 -----PDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP---P---KLKSKKWSKKFIDFIEGCLVKNY 267 (282)
T ss_pred -----cCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC---C---CCcccccCHHHHHHHHHHhCCCh
Confidence 012245568999999999888666655543211111111111100 0 00112467899999999999999
Q ss_pred CCCCCHHHHhcCCCC
Q psy8260 374 EKRITAEQALAHPYL 388 (427)
Q Consensus 374 ~~R~ta~e~L~Hp~f 388 (427)
.+|||+.|+|+||||
T Consensus 268 ~~Rp~~~ell~~~~~ 282 (282)
T cd06636 268 LSRPSTEQLLKHPFI 282 (282)
T ss_pred hhCcCHHHHhcCCCC
Confidence 999999999999997
No 177
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.6e-36 Score=286.72 Aligned_cols=258 Identities=21% Similarity=0.304 Sum_probs=193.1
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC----HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS----AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
|.+++.+|.|+||.||.+.. .+|+.+|||.+...... ......+.+|+++++.++|+||+++++++...
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~--~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 74 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLT--NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD----- 74 (265)
T ss_pred ccccceEeccCCeEEEEEEE--cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-----
Confidence 66788999999999997643 47889999988643221 22334577899999999999999999987643
Q ss_pred CceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...++++|++ +++|.+++.. ..+++..+..++.|++.||+|||+.+|+|+||||+||+++.++.+||+|||++....
T Consensus 75 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 75 -NTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred -CeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 4578888887 7899988865 568999999999999999999999999999999999999999999999999876432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..... ++ .........|+..|+|||++.
T Consensus 154 ~~~~~--~~--------------------------------------------------~~~~~~~~~~~~~~~~pe~~~ 181 (265)
T cd06631 154 WVGLH--GT--------------------------------------------------HSNMLKSMHGTPYWMAPEVIN 181 (265)
T ss_pred hcccc--cc--------------------------------------------------ccccccccCCCccccChhhhc
Confidence 11000 00 000112345788899999988
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
+..+...+|+|++|++++.+-++..+|.................. ........+.++.+||.+||+.||.+|||+
T Consensus 182 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~ 256 (265)
T cd06631 182 ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL-----MPRLPDSFSAAAIDFVTSCLTRDQHERPSA 256 (265)
T ss_pred CCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-----CCCCCCCCCHHHHHHHHHHhcCCcccCCCH
Confidence 777778889999999998886666555432111111111111000 111223567899999999999999999999
Q ss_pred HHHhcCCCC
Q psy8260 380 EQALAHPYL 388 (427)
Q Consensus 380 ~e~L~Hp~f 388 (427)
.|+++||||
T Consensus 257 ~~~l~~~~~ 265 (265)
T cd06631 257 LQLLRHDFL 265 (265)
T ss_pred HHHhcCCCC
Confidence 999999997
No 178
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1e-36 Score=303.19 Aligned_cols=256 Identities=21% Similarity=0.295 Sum_probs=186.5
Q ss_pred cccCcceeeccccCcccccEEEEeEE----eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSAL----DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFH 134 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~----~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~ 134 (427)
.+....|++++.||+|+||.||.+.. +..++..||||++.... .......+.+|+++++.+ +|+|||++++.+.
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 45567899999999999999997543 23345689999986543 233455678999999999 8999999999876
Q ss_pred cCccccCCceEEEEeccC-CCCHHHHHhh---------------------------------------------------
Q psy8260 135 SNTCLADFKNVYMVTHLM-GADLNNILRT--------------------------------------------------- 162 (427)
Q Consensus 135 ~~~~~~~~~~~~lv~e~~-g~~L~~~l~~--------------------------------------------------- 162 (427)
.. ..++++|+++ +++|.++++.
T Consensus 113 ~~------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (374)
T cd05106 113 HG------GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRP 186 (374)
T ss_pred CC------CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCC
Confidence 53 4578999988 7899887743
Q ss_pred --------------------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 163 --------------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 163 --------------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~ 266 (374)
T cd05106 187 VSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS 266 (374)
T ss_pred ccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCc
Confidence 136778889999999999999999999999999999999999999999999986432110
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
... ...+..+++.|||||++.+..
T Consensus 267 ~~~--------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 290 (374)
T cd05106 267 NYV--------------------------------------------------------VKGNARLPVKWMAPESIFDCV 290 (374)
T ss_pred cee--------------------------------------------------------eccCCCCccceeCHHHhcCCC
Confidence 000 000112456788898887777
Q ss_pred CCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQ 381 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e 381 (427)
+..++|+||+|++++.|.+ +..||..........+......... .....++++.+||.+||+.||.+|||++|
T Consensus 291 ~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~RPs~~~ 364 (374)
T cd05106 291 YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS------RPDFAPPEIYSIMKMCWNLEPTERPTFSQ 364 (374)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc------CCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 8888999999999976532 3333332221122222221111000 11235789999999999999999999999
Q ss_pred Hhc
Q psy8260 382 ALA 384 (427)
Q Consensus 382 ~L~ 384 (427)
+++
T Consensus 365 l~~ 367 (374)
T cd05106 365 ISQ 367 (374)
T ss_pred HHH
Confidence 875
No 179
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.2e-36 Score=288.66 Aligned_cols=252 Identities=23% Similarity=0.377 Sum_probs=185.7
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|++.+.||.|+||.||++ .+..++..+|+|.+... .......+.+|+++++.++||||+++++++... ..
T Consensus 6 ~~~i~~~lg~g~~g~v~~~-~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~------~~ 76 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKA-QNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYE------NN 76 (282)
T ss_pred HHHHHhhcccCCCeEEEEE-EECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC------CE
Confidence 3567789999999999965 56678889999988543 334456678999999999999999999987653 35
Q ss_pred EEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.|++++++ +++|..++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 77 ~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 156 (282)
T cd06643 77 LWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 156 (282)
T ss_pred EEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc
Confidence 68888877 6788776643 56899999999999999999999999999999999999999999999999998643221
Q ss_pred ---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 222 ---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 222 ---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
..... ||+.|+|||++
T Consensus 157 ~~~~~~~~-------------------------------------------------------------~~~~y~aPE~~ 175 (282)
T cd06643 157 IQRRDSFI-------------------------------------------------------------GTPYWMAPEVV 175 (282)
T ss_pred cccccccc-------------------------------------------------------------ccccccCHhhc
Confidence 11123 44445555554
Q ss_pred h-----hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 299 L-----NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 299 ~-----~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
. +..+...+|+||+|++++.+.++..+|................+... ......+.++.+||.+||+.||
T Consensus 176 ~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p 250 (282)
T cd06643 176 MCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-----AQPSRWSSEFKDFLKKCLEKNV 250 (282)
T ss_pred cccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC-----CCccccCHHHHHHHHHHccCCh
Confidence 2 12244568999999999877655544433221111111111111100 0112357889999999999999
Q ss_pred CCCCCHHHHhcCCCCCCC
Q psy8260 374 EKRITAEQALAHPYLSQY 391 (427)
Q Consensus 374 ~~R~ta~e~L~Hp~f~~~ 391 (427)
.+|||++++++||||...
T Consensus 251 ~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 251 DARWTTTQLLQHPFVTVN 268 (282)
T ss_pred hhCcCHHHHhcCCCEecc
Confidence 999999999999999763
No 180
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.6e-37 Score=291.66 Aligned_cols=263 Identities=22% Similarity=0.353 Sum_probs=192.5
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|++.+.||+|+||.||. +.+..+|..||+|.+.... .......+.+|+.++++++||||+++++.+... ..
T Consensus 2 ~~~~~~~ig~g~~g~v~~-~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~ 73 (286)
T cd06622 2 EIEVLDELGKGNYGSVYK-VLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIE------GA 73 (286)
T ss_pred hhhhhhhhcccCCeEEEE-EEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC------Ce
Confidence 467889999999999996 4566789999999886432 333446678999999999999999999987653 46
Q ss_pred EEEEeccC-CCCHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRTQ----KLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~~----~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
.|+++|++ +++|..++... .+++..+..++.|++.||.|||+ .||+||||||+||+++.++.+||+|||++...
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 153 (286)
T cd06622 74 VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL 153 (286)
T ss_pred EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 78899888 67898888754 78999999999999999999996 59999999999999999999999999998754
Q ss_pred CCC-cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 219 ENE-MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 219 ~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
... .....++..|+|||.+.+....
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~------------------------------------------------------ 179 (286)
T cd06622 154 VASLAKTNIGCQSYMAPERIKSGGPN------------------------------------------------------ 179 (286)
T ss_pred cCCccccCCCccCccCcchhcCCCCC------------------------------------------------------
Confidence 322 2223455566666654321000
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
....+..++|+|++|++++.+.++..+|.................. .........++++.+||.+||+.||++||
T Consensus 180 -~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 254 (286)
T cd06622 180 -QNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDG----DPPTLPSGYSDDAQDFVAKCLNKIPNRRP 254 (286)
T ss_pred -ccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhc----CCCCCCcccCHHHHHHHHHHcccCcccCC
Confidence 0011345679999999998886665555322111111111100000 01112234688999999999999999999
Q ss_pred CHHHHhcCCCCCCCCCC
Q psy8260 378 TAEQALAHPYLSQYSDP 394 (427)
Q Consensus 378 ta~e~L~Hp~f~~~~~~ 394 (427)
|++|+++||||.....+
T Consensus 255 ~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 255 TYAQLLEHPWLVKYKNA 271 (286)
T ss_pred CHHHHhcChhhhhccCC
Confidence 99999999999876544
No 181
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-36 Score=291.92 Aligned_cols=256 Identities=20% Similarity=0.321 Sum_probs=195.7
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.+|.|+||.||.+ .+..+++.||+|.+..... .....+.+|+.+++.++||||+++++.|... .
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~-~~~~~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~------~ 90 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVG------D 90 (296)
T ss_pred cceeeEEEecCCCCeEEEEE-EECCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEEeC------C
Confidence 46788899999999999965 5677899999998865432 2345577899999999999999999987643 4
Q ss_pred eEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 144 NVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
..|++++++ +++|.+++....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 91 ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred EEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 678899887 7899999887789999999999999999999999999999999999999999999999999876432110
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. ......|++.|+|||.+.+..
T Consensus 171 ~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 192 (296)
T cd06654 171 S----------------------------------------------------------KRSTMVGTPYWMAPEVVTRKA 192 (296)
T ss_pred c----------------------------------------------------------ccCcccCCccccCHHHHcCCC
Confidence 0 001124667778888777666
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
+..++|+|++|++++.+-++..||.............. ..... ......+++.+.+||.+||+.||.+|||++|+
T Consensus 193 ~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ei 267 (296)
T cd06654 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPE----LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267 (296)
T ss_pred CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCCCC----CCCccccCHHHHHHHHHHCcCCcccCcCHHHH
Confidence 67788999999999888666666643321111111110 11000 01123467889999999999999999999999
Q ss_pred hcCCCCCCC
Q psy8260 383 LAHPYLSQY 391 (427)
Q Consensus 383 L~Hp~f~~~ 391 (427)
++||||...
T Consensus 268 l~~~~~~~~ 276 (296)
T cd06654 268 LQHQFLKIA 276 (296)
T ss_pred hhChhhhcc
Confidence 999999754
No 182
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.1e-36 Score=291.98 Aligned_cols=259 Identities=31% Similarity=0.462 Sum_probs=182.0
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||+|+||.||. +.+..+|..||+|.+...... .......+|+.+++.++|+||+++++++... .
T Consensus 5 ~~y~~~~~ig~g~~~~v~~-~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~ 76 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYK-GISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTK------E 76 (291)
T ss_pred ceeEEEEEEEecCCEEEEE-EEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecC------C
Confidence 4578889999999999995 456678899999998643221 1223456899999999999999999998653 3
Q ss_pred eEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..|++++++++++.+.+.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 77 TLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 5788999998888776643 45788889999999999999999999999999999999999999999999998643221
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
... .....+++.|+|||++.+.
T Consensus 157 ~~~----------------------------------------------------------~~~~~~~~~y~aPE~~~~~ 178 (291)
T cd07870 157 SQT----------------------------------------------------------YSSEVVTLWYRPPDVLLGA 178 (291)
T ss_pred CCC----------------------------------------------------------CCCccccccccCCceeecC
Confidence 100 0011245556666655432
Q ss_pred -cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHH--------------HhcCCC--------CCcccHHhhcC--
Q psy8260 302 -MHYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKY--------------INSLPL--------LTKKDFRQVFK-- 355 (427)
Q Consensus 302 -~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~--------------~~~~~~--------~~~~~~~~~~~-- 355 (427)
.+...+|+||+|++++.+.++..+|...... +...+. ....+. .........+.
T Consensus 179 ~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (291)
T cd07870 179 TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRL 258 (291)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhcccc
Confidence 2445579999998887775554444211100 000000 000010 00111112222
Q ss_pred CCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 356 GANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 356 ~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
..++++.|||.+||+.||++|||++|++.||||
T Consensus 259 ~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 259 SRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred CCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 135789999999999999999999999999998
No 183
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.4e-36 Score=285.11 Aligned_cols=260 Identities=24% Similarity=0.346 Sum_probs=194.0
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|++.+.+|.|+||.||.+. ...++..||+|++....... ....+.+|+.+++.++|+||+++++.+... ..
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~ 73 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAI-CLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVG------DE 73 (267)
T ss_pred cceeeeeecCCCCeEEEEEE-EcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeC------CE
Confidence 57888999999999999654 55688999999986543333 556678999999999999999999887543 46
Q ss_pred EEEEeccC-CCCHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
.+++++++ +++|.++++. ..+++..+..++.|++.||.|||++||+||||||+||++++++.+||+|||++....
T Consensus 74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~ 153 (267)
T cd06610 74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLA 153 (267)
T ss_pred EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence 78888888 7789888864 358999999999999999999999999999999999999999999999999876432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
...... ........|+..|+|||++.
T Consensus 154 ~~~~~~------------------------------------------------------~~~~~~~~~~~~y~~Pe~~~ 179 (267)
T cd06610 154 DGGDRT------------------------------------------------------RKVRKTFVGTPCWMAPEVME 179 (267)
T ss_pred cCcccc------------------------------------------------------ccccccccCChhhcChHHHc
Confidence 211000 00112234677888888876
Q ss_pred hc-cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NW-MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~-~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
.. ....++|+|++|++++.+-++..+|..........+.....+... .....+...+++++|||.+||+.||.+|||
T Consensus 180 ~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 257 (267)
T cd06610 180 QVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSL--ETGADYKKYSKSFRKMISLCLQKDPSKRPT 257 (267)
T ss_pred cccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCc--CCccccccccHHHHHHHHHHcCCChhhCcC
Confidence 65 566678999999999888666666543322222222221111100 000112356788999999999999999999
Q ss_pred HHHHhcCCCC
Q psy8260 379 AEQALAHPYL 388 (427)
Q Consensus 379 a~e~L~Hp~f 388 (427)
++|+++||||
T Consensus 258 ~~~ll~~p~~ 267 (267)
T cd06610 258 AEELLKHKFF 267 (267)
T ss_pred HHHHhhCCCC
Confidence 9999999998
No 184
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-36 Score=302.94 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=187.2
Q ss_pred cccCcceeeccccCcccccEEEEeEE----eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSAL----DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFH 134 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~----~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~ 134 (427)
.+..++|.+++.||+|+||.||.+.. +..++..||||++.... .....+.+.+|+.+|+.+ +|||||++++++.
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 45567899999999999999997643 34567789999986432 233445678999999999 8999999999876
Q ss_pred cCccccCCceEEEEeccC-CCCHHHHHhhC--------------------------------------------------
Q psy8260 135 SNTCLADFKNVYMVTHLM-GADLNNILRTQ-------------------------------------------------- 163 (427)
Q Consensus 135 ~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~-------------------------------------------------- 163 (427)
.. ...+++||++ +|+|.++++..
T Consensus 110 ~~------~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (375)
T cd05104 110 VG------GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKA 183 (375)
T ss_pred cC------CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccc
Confidence 54 3468888887 78998877531
Q ss_pred --------------------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 164 --------------------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 164 --------------------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 263 (375)
T cd05104 184 DKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 263 (375)
T ss_pred ccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCcccee
Confidence 367788889999999999999999999999999999999999999999999864
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
........ ......++..|+|||+
T Consensus 264 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~y~aPE~ 287 (375)
T cd05104 264 IRNDSNYV--------------------------------------------------------VKGNARLPVKWMAPES 287 (375)
T ss_pred ccCccccc--------------------------------------------------------ccCCCCCCcceeChhH
Confidence 32211000 0001124566888888
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
+.+..+..++|+||+|++++.+.+ +..+|..........+........ ......+.++++||.+||+.||++|
T Consensus 288 ~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~R 361 (375)
T cd05104 288 IFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM------LSPECAPSEMYDIMKSCWDADPLKR 361 (375)
T ss_pred hcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC------CCCCCCCHHHHHHHHHHccCChhHC
Confidence 887778888999999999877532 333332221111222222211000 0112346789999999999999999
Q ss_pred CCHHHHhcC
Q psy8260 377 ITAEQALAH 385 (427)
Q Consensus 377 ~ta~e~L~H 385 (427)
||+.|+++.
T Consensus 362 Ps~~eil~~ 370 (375)
T cd05104 362 PTFKQIVQL 370 (375)
T ss_pred cCHHHHHHH
Confidence 999999864
No 185
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.2e-36 Score=285.90 Aligned_cols=257 Identities=27% Similarity=0.409 Sum_probs=191.7
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-------HHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-------VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-------~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
|.++..||.|+||.||.+ .+..+++.||+|.+....... ...+.+.+|+.++++++||||+++++++...
T Consensus 2 ~~~~~~ig~g~~~~v~~a-~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (267)
T cd06628 2 WIKGALIGSGSFGSVYLG-MNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA-- 78 (267)
T ss_pred ccccceeecCCCeEEEEE-EecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--
Confidence 567889999999999965 466678999999886543221 1224567899999999999999999987653
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
...+++++++ +++|.++++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++
T Consensus 79 ----~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 79 ----DHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred ----CccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 3567888877 6799988865 568999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
......... . .........|++.|+|||
T Consensus 155 ~~~~~~~~~--~--------------------------------------------------~~~~~~~~~~~~~y~~pe 182 (267)
T cd06628 155 KLEANSLST--K--------------------------------------------------TNGARPSLQGSVFWMAPE 182 (267)
T ss_pred ccccccccC--C--------------------------------------------------ccccccccCCCcCccChh
Confidence 543211000 0 000111234778899999
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
++.+..+...+|+|++|++++.+-++..+|..........+..... ........+.++.+||.+||+.||.+|
T Consensus 183 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~R 255 (267)
T cd06628 183 VVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA-------SPEIPSNISSEAIDFLEKTFEIDHNKR 255 (267)
T ss_pred HhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC-------CCcCCcccCHHHHHHHHHHccCCchhC
Confidence 8877777778899999999988866655553321111111111100 011123467889999999999999999
Q ss_pred CCHHHHhcCCCC
Q psy8260 377 ITAEQALAHPYL 388 (427)
Q Consensus 377 ~ta~e~L~Hp~f 388 (427)
||+.|+++||||
T Consensus 256 p~~~~il~~~~~ 267 (267)
T cd06628 256 PTAAELLKHPFL 267 (267)
T ss_pred cCHHHHhhCCCC
Confidence 999999999997
No 186
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=8.7e-37 Score=295.83 Aligned_cols=148 Identities=32% Similarity=0.516 Sum_probs=122.4
Q ss_pred eeeccccCcccccEEEEeEEeCc--CCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSV--SGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~--~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
|.+.+.||.|+||.||.+. +.. +++.||+|.+..... .........+|+.++++++||||+++++++... ..
T Consensus 2 y~~~~~ig~g~~g~v~~~~-~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~ 76 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAK-RKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH----AD 76 (316)
T ss_pred ceEEEEeccCCcEEEEEEE-ecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC----CC
Confidence 5677889999999999755 444 789999999875321 122234567899999999999999999998653 12
Q ss_pred ceEEEEeccCCCCHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC----CCCEEEeeC
Q psy8260 143 KNVYMVTHLMGADLNNILRT------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE----DCELKILDF 212 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~----~~~~kl~DF 212 (427)
..+++++|++++++.+++.. ..+++..+..++.|++.||.|||+++|+||||||+|||++. ++.+||+||
T Consensus 77 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 77 KSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred ceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 46899999998888776632 25889999999999999999999999999999999999998 899999999
Q ss_pred CCCCCC
Q psy8260 213 GLARPT 218 (427)
Q Consensus 213 Gla~~~ 218 (427)
|+++..
T Consensus 157 g~~~~~ 162 (316)
T cd07842 157 GLARLF 162 (316)
T ss_pred cccccc
Confidence 998754
No 187
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.1e-36 Score=290.65 Aligned_cols=257 Identities=32% Similarity=0.546 Sum_probs=187.1
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++.+.||.|++|.||. +.+..+|..||||++..... ......+.+|+.+++.++||||+++++.+... ...
T Consensus 2 y~~~~~l~~g~~~~v~~-~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~ 73 (284)
T cd07836 2 FKQLEKLGEGTYATVYK-GRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTE------NKL 73 (284)
T ss_pred ceEeeeeccCCceEEEE-EEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC------CcE
Confidence 67788999999999996 55677899999999865422 22234567899999999999999999988653 457
Q ss_pred EEEeccCCCCHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 146 YMVTHLMGADLNNILRT----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
+++++++.++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.....
T Consensus 74 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 74 MLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred EEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 89999998888887754 35899999999999999999999999999999999999999999999999988643221
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
... .....+|+.|++||++.+.
T Consensus 154 ~~~----------------------------------------------------------~~~~~~~~~y~~PE~~~~~ 175 (284)
T cd07836 154 VNT----------------------------------------------------------FSNEVVTLWYRAPDVLLGS 175 (284)
T ss_pred ccc----------------------------------------------------------cccccccccccChHHhcCC
Confidence 000 0111245556666655432
Q ss_pred -cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh---------------------cCCCCCcccHHhhcCCCCh
Q psy8260 302 -MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN---------------------SLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 302 -~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~s~ 359 (427)
.+...+|+|++|++++.+.++..+|......+....... ..+...........+..++
T Consensus 176 ~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (284)
T cd07836 176 RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADP 255 (284)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCc
Confidence 234567999999988777555444432221111111110 0111111222334455688
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
+++++|.+||+.||.+|+|++|+++||||
T Consensus 256 ~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 256 LGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99999999999999999999999999998
No 188
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.2e-37 Score=292.39 Aligned_cols=258 Identities=32% Similarity=0.540 Sum_probs=186.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++.+.+|.|++|.||++ .+..+|..||+|++............+.+|+.+++.++||||+++++++... ...
T Consensus 1 y~~~~~l~~g~~~~vy~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~------~~~ 73 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKA-RDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE------NKL 73 (283)
T ss_pred CchheEecCCCCeEEEEE-EEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC------CeE
Confidence 345678999999999965 4566899999999865433333334577899999999999999999987643 467
Q ss_pred EEEeccCCCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 146 YMVTHLMGADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
|+++++++++|.+++... .+++..+..++.|++.||+|||+++++||||+|+||+++.++.++|+|||+++......
T Consensus 74 ~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 74 YLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred EEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 899999988898887653 58999999999999999999999999999999999999999999999999986432111
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW- 301 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~- 301 (427)
.. .....+++.|+|||++.+.
T Consensus 154 ~~----------------------------------------------------------~~~~~~~~~~~aPE~~~~~~ 175 (283)
T cd07835 154 RT----------------------------------------------------------YTHEVVTLWYRAPEILLGSR 175 (283)
T ss_pred cc----------------------------------------------------------cCccccccCCCCCceeecCc
Confidence 00 0011234556666655432
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHH---------------------HhcCCCCCcccHHhhcCCCChh
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY---------------------INSLPLLTKKDFRQVFKGANPQ 360 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~s~~ 360 (427)
.+..++|+||+|++++.+.++..+|..........+. ....+.............++++
T Consensus 176 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (283)
T cd07835 176 QYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDED 255 (283)
T ss_pred ccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHH
Confidence 2345679999999888775554433211100111111 1111112222233344567889
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 361 AIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 361 ~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
+.+||.+||+.||.+|||++|+++||||
T Consensus 256 ~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 256 GLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 9999999999999999999999999998
No 189
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.6e-36 Score=289.80 Aligned_cols=261 Identities=23% Similarity=0.348 Sum_probs=190.8
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.+.|++.+.+|.|+||.||.+ .+..+++.||+|.+... .....+.+.+|+.+++.++||||+++++.+...
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~-~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 81 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKA-KNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWD------ 81 (292)
T ss_pred chhhhhhheecCCCCeEEEEE-EECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC------
Confidence 356888999999999999965 56678999999998643 344556678899999999999999999987643
Q ss_pred ceEEEEeccC-CCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...|++++++ +++|..++. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 82 ~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 82 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV 161 (292)
T ss_pred CeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecc
Confidence 3578888887 677877664 3468999999999999999999999999999999999999999999999999876432
Q ss_pred CC---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 220 NE---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 220 ~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
.. .....++..|+|||++.+...
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~------------------------------------------------------ 187 (292)
T cd06644 162 KTLQRRDSFIGTPYWMAPEVVMCETM------------------------------------------------------ 187 (292)
T ss_pred ccccccceecCCccccCceeeccccc------------------------------------------------------
Confidence 21 122334455555554422000
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
....+...+|+||+|++++.|-++..++..........+.....+ + .......++.++.+||.+||+.||++|
T Consensus 188 --~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~li~~~l~~~p~~R 260 (292)
T cd06644 188 --KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP--P---TLSQPSKWSMEFRDFLKTALDKHPETR 260 (292)
T ss_pred --cCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCC--c---cCCCCcccCHHHHHHHHHHhcCCcccC
Confidence 011244567999999999888666655543221111111111111 0 001123457889999999999999999
Q ss_pred CCHHHHhcCCCCCCCCC
Q psy8260 377 ITAEQALAHPYLSQYSD 393 (427)
Q Consensus 377 ~ta~e~L~Hp~f~~~~~ 393 (427)
||++|+++||||.....
T Consensus 261 p~~~~il~~~~~~~~~~ 277 (292)
T cd06644 261 PSAAQLLEHPFVSSVTS 277 (292)
T ss_pred cCHHHHhcCcccccccc
Confidence 99999999999976543
No 190
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.9e-36 Score=288.76 Aligned_cols=256 Identities=23% Similarity=0.386 Sum_probs=189.7
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||.|+||.||.+. +..++..||+|.+... .....+.+.+|++++++++||||+++++.+... .
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~-~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 75 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQ-HKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE------N 75 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEE-EcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC------C
Confidence 457888999999999999764 4458899999988543 344456678999999999999999999988653 4
Q ss_pred eEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..|+++|++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 76 KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 578999988 6789888764 4689999999999999999999999999999999999999999999999998764321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... ......||+.|+|||++..
T Consensus 156 ~~~----------------------------------------------------------~~~~~~~~~~y~~PE~~~~ 177 (280)
T cd06611 156 TLQ----------------------------------------------------------KRDTFIGTPYWMAPEVVAC 177 (280)
T ss_pred ccc----------------------------------------------------------ccceeecchhhcCHHHHhh
Confidence 100 0011234455555555432
Q ss_pred -----ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 301 -----WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 301 -----~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
..+..++|+|++|++++.+.++..+|..........+.....+.. + ......+.++.+||.+||+.||.+
T Consensus 178 ~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~li~~~l~~~p~~ 252 (280)
T cd06611 178 ETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPT----L-DQPSKWSSSFNDFLKSCLVKDPDD 252 (280)
T ss_pred cccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCC----c-CCcccCCHHHHHHHHHHhccChhh
Confidence 224456899999999988866655554322111111111111000 0 111345789999999999999999
Q ss_pred CCCHHHHhcCCCCCCC
Q psy8260 376 RITAEQALAHPYLSQY 391 (427)
Q Consensus 376 R~ta~e~L~Hp~f~~~ 391 (427)
|||++++++||||.+.
T Consensus 253 Rps~~~il~~~~~~~~ 268 (280)
T cd06611 253 RPTAAELLKHPFVSDQ 268 (280)
T ss_pred CcCHHHHhcChhhccc
Confidence 9999999999999865
No 191
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-36 Score=292.64 Aligned_cols=257 Identities=20% Similarity=0.330 Sum_probs=195.1
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||.|+||.||.+ .+..+|+.||+|.+..... ...+.+.+|+.+++.++||||+++++++... .
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~-~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~ 89 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTA-IDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVG------D 89 (297)
T ss_pred hhceeeeeeccCCCeEEEEE-EECCCCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecC------C
Confidence 56788899999999999964 5677899999999865332 2335567899999999999999999988643 4
Q ss_pred eEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 144 NVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
..|++++++ +++|.+++....+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 90 ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred EEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 578888887 7899999888889999999999999999999999999999999999999999999999999876432110
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. ......|++.|+|||.+.+..
T Consensus 170 ~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 191 (297)
T cd06656 170 S----------------------------------------------------------KRSTMVGTPYWMAPEVVTRKA 191 (297)
T ss_pred c----------------------------------------------------------CcCcccCCccccCHHHHcCCC
Confidence 0 001123667788888777666
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
+..++|+|++|++++.+-++..+|.............. .. ..........++.+++||.+||+.||.+|||++++
T Consensus 192 ~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 266 (297)
T cd06656 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NG----TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKEL 266 (297)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CC----CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 66778999999999888666655543211110000000 00 00001123457789999999999999999999999
Q ss_pred hcCCCCCCCC
Q psy8260 383 LAHPYLSQYS 392 (427)
Q Consensus 383 L~Hp~f~~~~ 392 (427)
++||||....
T Consensus 267 l~~~~~~~~~ 276 (297)
T cd06656 267 LQHPFLKLAK 276 (297)
T ss_pred hcCchhcccc
Confidence 9999998654
No 192
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.1e-36 Score=286.10 Aligned_cols=260 Identities=22% Similarity=0.329 Sum_probs=191.2
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC----HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS----AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
|..++.||+|+||.||. +.+..+++.||+|++...... ......+.+|+.++++++|+||+++++++...
T Consensus 2 ~~~~~~lg~g~~~~v~~-~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 75 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQ-ARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED----- 75 (268)
T ss_pred ccccceecCcCceEEEE-EEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC-----
Confidence 56778999999999996 456788999999988643221 12345678999999999999999999997643
Q ss_pred CceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC-CEEEeeCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPT 218 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~-~~kl~DFGla~~~ 218 (427)
...+++++++ +++|.++++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|||++...
T Consensus 76 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 76 -SHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred -CeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 3567777776 7899988864 5689999999999999999999999999999999999998765 6999999998654
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
....... ........||..|+|||++
T Consensus 155 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~~~~PE~~ 180 (268)
T cd06630 155 AAKGTGA------------------------------------------------------GEFQGQLLGTIAFMAPEVL 180 (268)
T ss_pred ccccccC------------------------------------------------------CccccccccccceeCHhHh
Confidence 3211000 0000122467788888888
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
.+..+...+|+|++|++++.+.++..+|.................... ........++++.++|.+||+.||.+|||
T Consensus 181 ~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~R~~ 257 (268)
T cd06630 181 RGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT---APSIPEHLSPGLRDVTLRCLELQPEDRPP 257 (268)
T ss_pred ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC---CCCCchhhCHHHHHHHHHHcCCCcccCcC
Confidence 776677788999999999877666555532221111111111100000 01122346789999999999999999999
Q ss_pred HHHHhcCCCCC
Q psy8260 379 AEQALAHPYLS 389 (427)
Q Consensus 379 a~e~L~Hp~f~ 389 (427)
+.|+++||||.
T Consensus 258 ~~~ll~~~~~~ 268 (268)
T cd06630 258 SRELLKHPVFR 268 (268)
T ss_pred HHHHhcCcccC
Confidence 99999999984
No 193
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.1e-36 Score=287.08 Aligned_cols=255 Identities=29% Similarity=0.503 Sum_probs=181.8
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
|++.+.+|+|+||.||.+ .+..++..||+|++........ ....++|+.++.++. |+||+++++++... ....
T Consensus 1 y~~~~~lg~g~~~~v~~~-~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~----~~~~ 74 (282)
T cd07831 1 YKILGKIGEGTFSEVLKA-QSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDR----KTGR 74 (282)
T ss_pred CceEeeccccccceEEEE-EEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecC----CCCc
Confidence 456788999999999964 4567899999998865432222 234468999999885 99999999998653 1245
Q ss_pred EEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC-
Q psy8260 145 VYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE- 221 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~- 221 (427)
.++++|++++++.+.+.. ..+++..+..++.|++.||.|||++|++||||||+||+++. +.+||+|||+++.....
T Consensus 75 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 75 LALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 789999998888887764 45899999999999999999999999999999999999999 99999999998754321
Q ss_pred -cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 222 -MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 222 -~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
..... +++.|+|||++..
T Consensus 154 ~~~~~~-------------------------------------------------------------~~~~y~aPE~~~~ 172 (282)
T cd07831 154 PYTEYI-------------------------------------------------------------STRWYRAPECLLT 172 (282)
T ss_pred CcCCCC-------------------------------------------------------------CCcccCChhHhhc
Confidence 11222 3445555554432
Q ss_pred -ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc---------------------CCCCCcccHHhhcCCCC
Q psy8260 301 -WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS---------------------LPLLTKKDFRQVFKGAN 358 (427)
Q Consensus 301 -~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~s 358 (427)
..+...+|+||+|++++.+-++..+|......+........ .+..............+
T Consensus 173 ~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (282)
T cd07831 173 DGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNAS 252 (282)
T ss_pred CCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHccccc
Confidence 22345679999999887775444333221110110100000 00111111223334568
Q ss_pred hhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 359 PQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 359 ~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
.++.+||.+||++||++|||++|+++||||
T Consensus 253 ~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 253 AEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred HHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 999999999999999999999999999998
No 194
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.4e-36 Score=284.97 Aligned_cols=258 Identities=21% Similarity=0.317 Sum_probs=190.0
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC---CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ---SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
.|.+++.+|+|+||.||+ +.+..+|..||+|++..... .......+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~lg~g~~g~vy~-~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 77 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYL-CYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA---- 77 (266)
T ss_pred CccccceecCCCCEEEEE-EEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC----
Confidence 477889999999999996 45677899999998864322 2233456778999999999999999999876421
Q ss_pred CceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...++++++++ +++|.+.+.. ..+++.....++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++...
T Consensus 78 ~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 78 EKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 24577888877 6789888764 568999999999999999999999999999999999999999999999999986432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
...... .......++..|+|||++.
T Consensus 158 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~ 182 (266)
T cd06651 158 TICMSG-------------------------------------------------------TGIRSVTGTPYWMSPEVIS 182 (266)
T ss_pred cccccC-------------------------------------------------------CccccCCccccccCHHHhC
Confidence 110000 0011224677788888887
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
+..+...+|+||+|++++.+.++..+|..........+... .+... ......++.+++||+ ||..||++|||+
T Consensus 183 ~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~li~-~~~~~p~~Rp~~ 255 (266)
T cd06651 183 GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTNP-----QLPSHISEHARDFLG-CIFVEARHRPSA 255 (266)
T ss_pred CCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc-CCCCC-----CCchhcCHHHHHHHH-HhcCChhhCcCH
Confidence 76677788999999999888665555543221111211111 11100 111235788899994 666799999999
Q ss_pred HHHhcCCCCC
Q psy8260 380 EQALAHPYLS 389 (427)
Q Consensus 380 ~e~L~Hp~f~ 389 (427)
+|+++||||.
T Consensus 256 ~eil~hp~~~ 265 (266)
T cd06651 256 EELLRHPFAQ 265 (266)
T ss_pred HHHhcCcccc
Confidence 9999999995
No 195
>KOG4279|consensus
Probab=100.00 E-value=7.5e-38 Score=310.36 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=186.8
Q ss_pred ccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEec
Q psy8260 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e 150 (427)
+||+|.||.|| ++.|..|.+++|||.+... .....+-...||.+.++|+|.|||++++.+..+ ..+-|+||
T Consensus 582 VLGKGTYG~VY-A~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen------Gf~kIFME 652 (1226)
T KOG4279|consen 582 VLGKGTYGTVY-AARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN------GFFKIFME 652 (1226)
T ss_pred EeecCceeEEE-eeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccCCC------CeEEEEee
Confidence 69999999999 6789999999999998643 233344466899999999999999999886543 34556665
Q ss_pred -cCCCCHHHHHhh--CCC--CHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc-CCCCEEEeeCCCCCCCCCCccc
Q psy8260 151 -LMGADLNNILRT--QKL--SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELKILDFGLARPTENEMTG 224 (427)
Q Consensus 151 -~~g~~L~~~l~~--~~l--~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~-~~~~~kl~DFGla~~~~~~~~~ 224 (427)
..||+|.++++. +++ +|..+..|.+||++||+|||++.|||||||-+|+|++ ..|.+||+|||.++..-.-.
T Consensus 653 qVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-- 730 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-- 730 (1226)
T ss_pred cCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCC--
Confidence 559999999986 456 8889999999999999999999999999999999997 57999999999887532100
Q ss_pred ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc--c
Q psy8260 225 YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW--M 302 (427)
Q Consensus 225 ~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~--~ 302 (427)
....++.||..|||||||-.. .
T Consensus 731 --------------------------------------------------------P~TETFTGTLQYMAPEvIDqG~RG 754 (1226)
T KOG4279|consen 731 --------------------------------------------------------PCTETFTGTLQYMAPEVIDQGPRG 754 (1226)
T ss_pred --------------------------------------------------------ccccccccchhhhChHhhccCCcC
Confidence 011234456666666665432 2
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
|+...||||+||.+-+|.++.+||..--....+. + ... ..+....+...+|.+|+.||.+|+..||.+|++|.++
T Consensus 755 YG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM--F-kVG--myKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~L 829 (1226)
T KOG4279|consen 755 YGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM--F-KVG--MYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDL 829 (1226)
T ss_pred CCchhhhhhccceeEeeccCCCCeeecCChhHhh--h-hhc--ceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHh
Confidence 5556699999999988877777775422111111 0 000 1111223445578999999999999999999999999
Q ss_pred hcCCCCCCC
Q psy8260 383 LAHPYLSQY 391 (427)
Q Consensus 383 L~Hp~f~~~ 391 (427)
|+.||+...
T Consensus 830 L~DpFlq~~ 838 (1226)
T KOG4279|consen 830 LQDPFLQHN 838 (1226)
T ss_pred ccCcccccC
Confidence 999999754
No 196
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.5e-36 Score=283.82 Aligned_cols=251 Identities=24% Similarity=0.324 Sum_probs=191.7
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.||+|+||.+|. +.+..+|+.||+|.+............+.+|+.+++.++||||+++++++... ...
T Consensus 2 y~~~~~lg~g~~g~~~~-~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~ 74 (256)
T cd08218 2 YVKVKKIGEGSFGKAIL-VKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN------GNL 74 (256)
T ss_pred ceEEEEeccCCceEEEE-EEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC------CeE
Confidence 66788999999999996 45667899999999865433444556778999999999999999999987643 467
Q ss_pred EEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
+++++++ +++|.+.+.. ..+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++......
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 75 YIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 8888887 7789887754 25789999999999999999999999999999999999999999999999988643221
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. ......|++.|+|||++.+.
T Consensus 155 ~~----------------------------------------------------------~~~~~~~~~~~~~pe~~~~~ 176 (256)
T cd08218 155 VE----------------------------------------------------------LARTCIGTPYYLSPEICENR 176 (256)
T ss_pred hh----------------------------------------------------------hhhhccCCccccCHHHhCCC
Confidence 00 00012356677888887766
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHH
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQ 381 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e 381 (427)
....++|+|++|++++.+.++..++......+.......... .......+.++.++|.+||+.||.+|||+.|
T Consensus 177 ~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (256)
T cd08218 177 PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY-------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNS 249 (256)
T ss_pred CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC-------CCCcccCCHHHHHHHHHHhhCChhhCcCHHH
Confidence 666778999999999888666555543221122222211111 0112345788999999999999999999999
Q ss_pred HhcCCCC
Q psy8260 382 ALAHPYL 388 (427)
Q Consensus 382 ~L~Hp~f 388 (427)
+++||||
T Consensus 250 vl~~~~~ 256 (256)
T cd08218 250 ILEKNFI 256 (256)
T ss_pred HhhCcCC
Confidence 9999997
No 197
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.3e-36 Score=290.00 Aligned_cols=252 Identities=25% Similarity=0.372 Sum_probs=193.4
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|.+.+.||.|+||.||.+ .+..+++.||+|.+..... .......+.+|++++++++||||+++++++... .
T Consensus 2 ~y~~~~~ig~g~~~~vy~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 74 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLV-RHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD------S 74 (290)
T ss_pred ceEEEEEeecCCCeEEEEE-EEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC------C
Confidence 4677889999999999964 4566899999998864322 223345677999999999999999999988643 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
..|++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 75 NLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred eEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 678999998 8899988754 56899999999999999999999999999999999999999999999999998754332
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.... .|++.|+|||.+.+.
T Consensus 155 ~~~~-------------------------------------------------------------~~~~~y~aPE~~~~~ 173 (290)
T cd05580 155 TYTL-------------------------------------------------------------CGTPEYLAPEIILSK 173 (290)
T ss_pred CCCC-------------------------------------------------------------CCCccccChhhhcCC
Confidence 2122 355566666666555
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC----
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI---- 377 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~---- 377 (427)
....++|+|++|++++.|.++..+|................. .+....++.++++|.+||+.||.+|+
T Consensus 174 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ 245 (290)
T cd05580 174 GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV--------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLK 245 (290)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc--------cCCccCCHHHHHHHHHHccCCHHHccCccc
Confidence 566678999999999888766655533221111111111111 11234578999999999999999999
Q ss_pred -CHHHHhcCCCCCCCC
Q psy8260 378 -TAEQALAHPYLSQYS 392 (427)
Q Consensus 378 -ta~e~L~Hp~f~~~~ 392 (427)
+++|+++||||....
T Consensus 246 ~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 246 NGVNDIKNHPWFAGID 261 (290)
T ss_pred CCHHHHHcCcccccCC
Confidence 999999999998754
No 198
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-36 Score=287.66 Aligned_cols=254 Identities=22% Similarity=0.359 Sum_probs=195.1
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
+|.+.+.+|.|+||.||.+ .+..+++.||+|.+.... .......+.+|+++++.++|+||+++++.+... ..
T Consensus 2 ~y~~~~~lg~g~~~~v~~~-~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~ 73 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKA-IDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG------SK 73 (274)
T ss_pred hhhhhhhhcCCCCeEEEEE-EECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC------Ce
Confidence 4667789999999999965 456789999999886542 233445677899999999999999999987643 45
Q ss_pred EEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 145 VYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
.|++++++ +++|.+++....+++..+..++.|++.||.|||+++++||||+|+||+++.++.++|+|||+++.......
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred EEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 78888887 67999998877899999999999999999999999999999999999999999999999999865432110
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
......|++.|+|||++.+..+
T Consensus 154 ----------------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~ 175 (274)
T cd06609 154 ----------------------------------------------------------KRNTFVGTPFWMAPEVIKQSGY 175 (274)
T ss_pred ----------------------------------------------------------ccccccCCccccChhhhccCCC
Confidence 0112346677888888777667
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcC-CCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFK-GANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
..++|+|++|++++.+.++..+|................+. .... ..++++.++|.+||..||.+|||++++
T Consensus 176 ~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~i 248 (274)
T cd06609 176 DEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPP-------SLEGNKFSKPFKDFVSLCLNKDPKERPSAKEL 248 (274)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCC-------CCcccccCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 77889999999998886666555322111111111111110 0111 267889999999999999999999999
Q ss_pred hcCCCCCCC
Q psy8260 383 LAHPYLSQY 391 (427)
Q Consensus 383 L~Hp~f~~~ 391 (427)
++||||...
T Consensus 249 l~~~~~~~~ 257 (274)
T cd06609 249 LKHKFIKKA 257 (274)
T ss_pred hhChhhcCC
Confidence 999999764
No 199
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.6e-36 Score=282.77 Aligned_cols=251 Identities=25% Similarity=0.331 Sum_probs=193.0
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.+|.|+||.|+. +.+..+++.||+|.+.....+.....++.+|+.++++++|+||+++++++... ...
T Consensus 2 y~~~~~ig~g~~g~v~~-~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~~~ 74 (256)
T cd08221 2 YIPIRVLGKGAFGEATL-YRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD------NTL 74 (256)
T ss_pred ceEeeEecccCCceEEE-EEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC------CeE
Confidence 56778999999998885 45667899999999876544555566788999999999999999999998654 457
Q ss_pred EEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
+++++++ +++|.+++... .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||+++.....
T Consensus 75 ~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 75 LIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred EEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 8888887 68999888653 5899999999999999999999999999999999999999999999999988643221
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. ......|++.|+|||++.+.
T Consensus 155 ~~----------------------------------------------------------~~~~~~~~~~y~ape~~~~~ 176 (256)
T cd08221 155 YS----------------------------------------------------------MAETVVGTPYYMSPELCQGV 176 (256)
T ss_pred cc----------------------------------------------------------cccccCCCccccCHhhcCCC
Confidence 10 00122466778888877766
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHH
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQ 381 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e 381 (427)
.+..++|+||+|++++.+.++..+|............... ... ......+.++.++|.+||+.||.+|||++|
T Consensus 177 ~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ 249 (256)
T cd08221 177 KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYT-----PVVSVYSSELISLVHSLLQQDPEKRPTADE 249 (256)
T ss_pred CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC-----CCccccCHHHHHHHHHHcccCcccCCCHHH
Confidence 6667789999999998886554444322211222222111 111 111456789999999999999999999999
Q ss_pred HhcCCCC
Q psy8260 382 ALAHPYL 388 (427)
Q Consensus 382 ~L~Hp~f 388 (427)
+|+|||+
T Consensus 250 ll~~~~l 256 (256)
T cd08221 250 VLDQPLL 256 (256)
T ss_pred HhhCcCC
Confidence 9999996
No 200
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-36 Score=292.44 Aligned_cols=256 Identities=22% Similarity=0.357 Sum_probs=196.0
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.||.|+||.||. +.+..+|+.||+|.+..... .....+.+|+.+++.++||||+++++++... .
T Consensus 19 ~~y~~~~~lg~g~~g~vy~-~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~ 89 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFT-AIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVG------D 89 (296)
T ss_pred ceEEEEEEEecCCCeEEEE-EEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecC------c
Confidence 4578889999999999996 45677899999998864322 2345577899999999999999999988643 4
Q ss_pred eEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 144 NVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
.+|++++++ +++|..++....+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 90 ELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred eEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 578888887 7899998888889999999999999999999999999999999999999999999999999876432110
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. ......|++.|+|||++.+..
T Consensus 170 ~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 191 (296)
T cd06655 170 S----------------------------------------------------------KRSTMVGTPYWMAPEVVTRKA 191 (296)
T ss_pred c----------------------------------------------------------cCCCcCCCccccCcchhcCCC
Confidence 0 001123667778888776666
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
+..++|+||+|++++.+.++..+|.............. .... .......+++.+.+||.+||+.||.+|||+.++
T Consensus 192 ~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~i 266 (296)
T cd06655 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP----ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKEL 266 (296)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCc----ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence 67788999999999888666666543221111111111 1000 001123467899999999999999999999999
Q ss_pred hcCCCCCCC
Q psy8260 383 LAHPYLSQY 391 (427)
Q Consensus 383 L~Hp~f~~~ 391 (427)
++||||...
T Consensus 267 l~~~~~~~~ 275 (296)
T cd06655 267 LQHPFLKLA 275 (296)
T ss_pred hhChHhhhc
Confidence 999999754
No 201
>KOG1290|consensus
Probab=100.00 E-value=7.8e-37 Score=293.60 Aligned_cols=328 Identities=27% Similarity=0.346 Sum_probs=217.2
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-----CC---Cceeeeee
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-----HE---NVIGLLDV 132 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-----Hp---nIv~l~~~ 132 (427)
+..++|.+.+.||.|.|++|+. ++|..+.+.||+|+++.. ..-.+..+.||++|++++ |+ .||+|++.
T Consensus 75 F~~gRY~v~rKLGWGHFSTVWL-awDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~ 150 (590)
T KOG1290|consen 75 FNGGRYHVQRKLGWGHFSTVWL-AWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDH 150 (590)
T ss_pred ccCceEEEEEeccccccceeEE-EeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecc
Confidence 3448899999999999999995 789999999999998632 233456778999998873 43 59999999
Q ss_pred eecCccccCCceEEEEeccCCCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCCeEEcCC----
Q psy8260 133 FHSNTCLADFKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNED---- 204 (427)
Q Consensus 133 ~~~~~~~~~~~~~~lv~e~~g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~-~iiHrDLKp~NILl~~~---- 204 (427)
|.... ....+++||+|++|.+|..++.. ++++...++.|++||+.||+|||.. ||||-||||+|||+..+
T Consensus 151 FkhsG--pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~ 228 (590)
T KOG1290|consen 151 FKHSG--PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDP 228 (590)
T ss_pred ceecC--CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccch
Confidence 96533 34578999999999999998864 5799999999999999999999965 99999999999998533
Q ss_pred -------CCE-----EEeeCCCCCCC------------CC------------------C--------c------------
Q psy8260 205 -------CEL-----KILDFGLARPT------------EN------------------E--------M------------ 222 (427)
Q Consensus 205 -------~~~-----kl~DFGla~~~------------~~------------------~--------~------------ 222 (427)
+.+ +..+=+.+... .+ . .
T Consensus 229 ~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~ 308 (590)
T KOG1290|consen 229 AKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPR 308 (590)
T ss_pred hhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccC
Confidence 100 00000000000 00 0 0
Q ss_pred -ccc------------------cccccccchhhhhcccc--cC-CCCcceeeccC----------Ccccc-------ccc
Q psy8260 223 -TGY------------------VATRWYRAPEIMLNWMH--YN-QTGVPFYFQDL----------KPSNI-------AVN 263 (427)
Q Consensus 223 -~~~------------------~gt~~y~aPE~l~~~~~--~~-~~~~~~~~~d~----------~~~~~-------~~~ 263 (427)
... .....-.+||-..+... .. ......+..+. -..|- .-.
T Consensus 309 ~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~ 388 (590)
T KOG1290|consen 309 INGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPE 388 (590)
T ss_pred CCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCc
Confidence 000 00000111110000000 00 00000000000 00011 123
Q ss_pred ccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc----H--H---
Q psy8260 264 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS----D--S--- 334 (427)
Q Consensus 264 ~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~----~--~--- 334 (427)
.+..+||+|||.|++.....+.-+.|.+|+|||||.+..|....||||.+|+.++|.|+..-|...... + .
T Consensus 389 ~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~ 468 (590)
T KOG1290|consen 389 CDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL 468 (590)
T ss_pred cceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence 467789999999999999999999999999999999999999999999999999999988777543211 0 0
Q ss_pred ------------------HHHHHhcCCCCCc----ccH--Hh----hcC---CCChhHHHHHHHhcCCCCCCCCCHHHHh
Q psy8260 335 ------------------ARKYINSLPLLTK----KDF--RQ----VFK---GANPQAIDLLSLMLELDSEKRITAEQAL 383 (427)
Q Consensus 335 ------------------~~~~~~~~~~~~~----~~~--~~----~~~---~~s~~~~dLi~~mL~~dP~~R~ta~e~L 383 (427)
.+.+++....+.. +.| .+ .+. ....++.|||.-||+++|.||+||.++|
T Consensus 469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl 548 (590)
T KOG1290|consen 469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL 548 (590)
T ss_pred HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence 0111111111100 000 00 000 1134667999999999999999999999
Q ss_pred cCCCCCCCCCC
Q psy8260 384 AHPYLSQYSDP 394 (427)
Q Consensus 384 ~Hp~f~~~~~~ 394 (427)
+|||+.....|
T Consensus 549 ~hPwLn~~~~~ 559 (590)
T KOG1290|consen 549 KHPWLNPVAGP 559 (590)
T ss_pred cCccccCCCCC
Confidence 99999987776
No 202
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.5e-36 Score=290.67 Aligned_cols=258 Identities=19% Similarity=0.293 Sum_probs=184.3
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.+.....||+|+||.||. +.+..+|+.||+|.+..... ......+.+|+.++.++. ||||+++++++... .
T Consensus 5 ~~~~~~~lg~G~~g~vy~-~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~------~ 76 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNK-MLHKPSGTIMAVKRIRSTVD-EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE------G 76 (288)
T ss_pred HhHHHHHhCCCCceEEEE-EEECCCCCEEEEEEehhccC-hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC------C
Confidence 455667899999999996 55777899999999865432 234456789999999996 99999999987543 3
Q ss_pred eEEEEeccCCCCHHHHHh------hCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILR------TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~------~~~l~~~~~~~~~~qi~~aL~yLH~~-~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
..++++++++.++.++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 77 ~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 156 (288)
T cd06616 77 DCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISG 156 (288)
T ss_pred cEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhH
Confidence 568889998776655432 35689999999999999999999975 99999999999999999999999999986
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
....... .....|++.|+|||
T Consensus 157 ~~~~~~~-----------------------------------------------------------~~~~~~~~~y~aPE 177 (288)
T cd06616 157 QLVDSIA-----------------------------------------------------------KTRDAGCRPYMAPE 177 (288)
T ss_pred HhccCCc-----------------------------------------------------------cccccCccCccCHH
Confidence 4322100 01113455566666
Q ss_pred Hhhhc---cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 297 IMLNW---MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 297 vl~~~---~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
++.+. .+...+|+||+|++++.+-++..||.... .........................++++.+||.+||+.||
T Consensus 178 ~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 255 (288)
T cd06616 178 RIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDE 255 (288)
T ss_pred HhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCCh
Confidence 65543 35567899999999877744444443211 11111111110000000011113468899999999999999
Q ss_pred CCCCCHHHHhcCCCCCCC
Q psy8260 374 EKRITAEQALAHPYLSQY 391 (427)
Q Consensus 374 ~~R~ta~e~L~Hp~f~~~ 391 (427)
++|||++|+++||||...
T Consensus 256 ~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 256 SKRPKYKELLEHPFIKDY 273 (288)
T ss_pred hhCcCHHHHhcChhhhch
Confidence 999999999999999864
No 203
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.1e-36 Score=293.44 Aligned_cols=257 Identities=22% Similarity=0.399 Sum_probs=193.5
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
++....+|.|+||.||. +.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++.+... ...
T Consensus 23 ~~~~~~ig~g~~g~v~~-~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~------~~~ 93 (297)
T cd06659 23 LENYIKIGEGSTGIVCI-AREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVG------EEL 93 (297)
T ss_pred HHhhhhcCCCCceeEEE-EEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeC------CeE
Confidence 44556899999999996 45667899999999854322 2345577999999999999999999987653 457
Q ss_pred EEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccc
Q psy8260 146 YMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 224 (427)
|++++++ +++|..++....+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++........
T Consensus 94 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~- 172 (297)
T cd06659 94 WVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP- 172 (297)
T ss_pred EEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-
Confidence 8888877 67899888777899999999999999999999999999999999999999999999999998753321100
Q ss_pred ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCC
Q psy8260 225 YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHY 304 (427)
Q Consensus 225 ~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~ 304 (427)
......|++.|+|||++.+..+.
T Consensus 173 ---------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 195 (297)
T cd06659 173 ---------------------------------------------------------KRKSLVGTPYWMAPEVISRTPYG 195 (297)
T ss_pred ---------------------------------------------------------cccceecCccccCHHHHccCCCC
Confidence 00122466777788877766677
Q ss_pred CCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 305 NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 305 ~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
.++|+||+|++++.|.++..+|.......... .....+.. ........++++.+||.+||+.||.+|||++|+++
T Consensus 196 ~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 196 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDSPPP----KLKNAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhccCCC----CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 78899999999988866655553221111111 11111100 11122356788999999999999999999999999
Q ss_pred CCCCCCCCCC
Q psy8260 385 HPYLSQYSDP 394 (427)
Q Consensus 385 Hp~f~~~~~~ 394 (427)
||||.+...|
T Consensus 271 ~~~~~~~~~~ 280 (297)
T cd06659 271 HPFLLQTGLP 280 (297)
T ss_pred ChhhccCCCc
Confidence 9999875544
No 204
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.1e-36 Score=287.39 Aligned_cols=251 Identities=20% Similarity=0.357 Sum_probs=184.0
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHH-HhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRM-LKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~-l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+|.+.+.||+|+||.||+ +.+..+|+.||||++....... ...+...|+.+ ++.++||||+++++++... .
T Consensus 2 ~~~~~~~ig~g~~g~v~~-~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~------~ 73 (283)
T cd06617 2 DLEVIEELGRGAYGVVDK-MRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFRE------G 73 (283)
T ss_pred CceEEEEecccCCeEEEE-EEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecC------C
Confidence 467888999999999996 4566789999999987543322 23445566664 6677999999999988643 4
Q ss_pred eEEEEeccCCCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 144 NVYMVTHLMGADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~-~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.+|++++++.++|.+++.. ..+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++.
T Consensus 74 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~ 153 (283)
T cd06617 74 DVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGY 153 (283)
T ss_pred cEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 5799999998888877643 3589999999999999999999997 999999999999999999999999999875
Q ss_pred CCCCc--ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 218 TENEM--TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 218 ~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
..... +...++.. |+||
T Consensus 154 ~~~~~~~~~~~~~~~-------------------------------------------------------------y~aP 172 (283)
T cd06617 154 LVDSVAKTIDAGCKP-------------------------------------------------------------YMAP 172 (283)
T ss_pred cccccccccccCCcc-------------------------------------------------------------ccCh
Confidence 43211 11234444 5555
Q ss_pred HHhhh----ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHHHhc-CCCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 296 EIMLN----WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKYINS-LPLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 296 Evl~~----~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
|++.+ ..+..++|+|++|++++.+.++..||...... ......... .+..+ ...+++++.+||.+||
T Consensus 173 E~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~~l 245 (283)
T cd06617 173 ERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLP-------AEKFSPEFQDFVNKCL 245 (283)
T ss_pred hhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCC-------ccccCHHHHHHHHHHc
Confidence 54432 12445679999999998886665555321111 111111111 11111 1235788999999999
Q ss_pred CCCCCCCCCHHHHhcCCCCCCC
Q psy8260 370 ELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
..||.+|||++|+++||||.+.
T Consensus 246 ~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 246 KKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred cCChhhCcCHHHHhcCchhhhc
Confidence 9999999999999999999864
No 205
>KOG0670|consensus
Probab=100.00 E-value=5.3e-37 Score=296.26 Aligned_cols=285 Identities=32% Similarity=0.466 Sum_probs=209.7
Q ss_pred ccccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCC------CCceeee
Q psy8260 57 PYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNH------ENVIGLL 130 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~H------pnIv~l~ 130 (427)
...|+..+.|.+....|+|-|+.|+ .|.+...|+.||||+|.+. ..-.+.-++|+++|++|+. -++++|+
T Consensus 425 ~igE~LD~RY~V~~~~GkGvFs~Vv-ra~D~~r~~~vAiKIIRnN---E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 425 RIGELLDSRYEVQGYTGKGVFSTVV-RARDQARGQEVAIKIIRNN---EVMHKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred ehhhhhcceeEEEeccccceeeeee-eccccCCCCeeEEEEeecc---hHHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 4557778889999999999999999 5778888999999999753 3334556789999999963 3688888
Q ss_pred eeeecCccccCCceEEEEeccCCCCHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC-C
Q psy8260 131 DVFHSNTCLADFKNVYMVTHLMGADLNNILRT----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED-C 205 (427)
Q Consensus 131 ~~~~~~~~~~~~~~~~lv~e~~g~~L~~~l~~----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~-~ 205 (427)
-.|... .+++||+|.+.-+|..+++. -+|....++.|++|+..||..|...||+|.||||.|||+++. .
T Consensus 501 r~F~hk------nHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 501 RHFKHK------NHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN 574 (752)
T ss_pred HHhhhc------ceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc
Confidence 776543 57899999999999999875 358888999999999999999999999999999999999975 5
Q ss_pred CEEEeeCCCCCCC-CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccc
Q psy8260 206 ELKILDFGLARPT-ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMT 284 (427)
Q Consensus 206 ~~kl~DFGla~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~ 284 (427)
.+||||||.|... .++.+.|..+++|+|||+|+| ..|+... |+|++||.+++ .++
T Consensus 575 iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG-~~yd~~i------D~WSvgctLYE-----------------lYt 630 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENEITPYLVSRFYRAPEIILG-LPYDYPI------DTWSVGCTLYE-----------------LYT 630 (752)
T ss_pred eeeeccCccccccccccccHHHHHHhccCcceeec-CcccCCc------cceeeceeeEE-----------------eec
Confidence 7999999999765 457889999999999999998 4455444 99999999998 444
Q ss_pred cccccccccchHHhhhccCCCC-CCHHHHHHHHHHhCCCCHHHHhhcC--cHHHH---HH-------------HhcCCCC
Q psy8260 285 GYVATRWYRAPEIMLNWMHYNQ-TDIHQLNLIMEMLGTPPAEFMAKIS--SDSAR---KY-------------INSLPLL 345 (427)
Q Consensus 285 ~~~gt~~Y~APEvl~~~~~~~~-~d~~slg~i~~~lg~~~~~~~~~~~--~~~~~---~~-------------~~~~~~~ 345 (427)
|.+ +|++ +.-..|-+.+.+-|..|..+..+-. .+... ++ .......
T Consensus 631 GkI---------------lFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~v 695 (752)
T KOG0670|consen 631 GKI---------------LFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNV 695 (752)
T ss_pred cce---------------ecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEeccc
Confidence 443 3332 3444555555555655544432100 00000 00 0000011
Q ss_pred -CcccHHhhcCC----------CChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q psy8260 346 -TKKDFRQVFKG----------ANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQ 390 (427)
Q Consensus 346 -~~~~~~~~~~~----------~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~ 390 (427)
+.+.+...... +-.+++|||.+||.+||+||+|+.|+|+||||..
T Consensus 696 kPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 696 KPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred CcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 11222221111 1236789999999999999999999999999964
No 206
>KOG0614|consensus
Probab=100.00 E-value=1.4e-38 Score=306.38 Aligned_cols=264 Identities=22% Similarity=0.346 Sum_probs=210.2
Q ss_pred ccccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeec
Q psy8260 57 PYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 135 (427)
-+..+...++++...||-|+||.|=..+.+.. ...+|+|.+++... ...+.+..+.|-++|..++.|.||+||-.|..
T Consensus 413 e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~-~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd 491 (732)
T KOG0614|consen 413 EFAQVKLSDLKRIATLGVGGFGRVELVKVNSQ-KATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD 491 (732)
T ss_pred hhcccchhhhhhhhhcccCccceEEEEEeccc-chHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc
Confidence 34455556677888999999999986665432 22589998876432 34455667899999999999999999988865
Q ss_pred CccccCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCC
Q psy8260 136 NTCLADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 213 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFG 213 (427)
. .++||.||.| ||.+..+++. +.|++..++.++..+++|++|||++|||.|||||+|+|++.+|-+||.|||
T Consensus 492 ~------kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 492 S------KYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred c------hhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehh
Confidence 3 5788888865 9999999875 579999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 214 LARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 214 la~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
+|+...+. ...+++||||.|+
T Consensus 566 FAKki~~g-----------------------------------------------------------~KTwTFcGTpEYV 586 (732)
T KOG0614|consen 566 FAKKIGSG-----------------------------------------------------------RKTWTFCGTPEYV 586 (732)
T ss_pred hHHHhccC-----------------------------------------------------------CceeeecCCcccc
Confidence 99854322 1345778999999
Q ss_pred chHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 294 APEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 294 APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
|||++++..++..+|.|+||+.+++|.++.+||.....-.+...++.... .-.+.+.++..|.|||+++...+|
T Consensus 587 APEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid------~i~~Pr~I~k~a~~Lik~LCr~~P 660 (732)
T KOG0614|consen 587 APEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID------KIEFPRRITKTATDLIKKLCRDNP 660 (732)
T ss_pred cchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh------hhhcccccchhHHHHHHHHHhcCc
Confidence 99999988899999999999999999777777765433333333332222 112335578899999999999999
Q ss_pred CCCCC-----HHHHhcCCCCCCCC
Q psy8260 374 EKRIT-----AEQALAHPYLSQYS 392 (427)
Q Consensus 374 ~~R~t-----a~e~L~Hp~f~~~~ 392 (427)
..|+. +.++-+|-||....
T Consensus 661 ~ERLG~~~~gI~DIkkH~Wf~gfd 684 (732)
T KOG0614|consen 661 TERLGYQKGGINDIKKHRWFEGFD 684 (732)
T ss_pred HhhhccccCChHHHHhhhhhhcCC
Confidence 99985 89999999998654
No 207
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.7e-36 Score=285.57 Aligned_cols=255 Identities=20% Similarity=0.311 Sum_probs=184.4
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|++.+.||+|+||.||.+ .+..+|+.||+|++..... .....+.+|+.++++++||||+++++++...
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~-~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~------ 78 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKA-RNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSR------ 78 (267)
T ss_pred hhhcchhheeecCCCeEEEEE-EECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeC------
Confidence 456889999999999999965 4567889999998864322 2234567899999999999999999987643
Q ss_pred ceEEEEeccC-CCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
...++++|++ +++|.+++. ...+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 79 EKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 4578899988 578988775 45689999999999999999999999999999999999999999999999999864321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... ......|++.|+|||++..
T Consensus 159 ~~~----------------------------------------------------------~~~~~~~~~~y~~PE~~~~ 180 (267)
T cd06646 159 TIA----------------------------------------------------------KRKSFIGTPYWMAPEVAAV 180 (267)
T ss_pred ccc----------------------------------------------------------ccCccccCccccCHhHccc
Confidence 110 0011234455556665532
Q ss_pred ---ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 301 ---WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 301 ---~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
..+...+|+||+|++++.+.++..++............ .........+. .....+..+.|||++||+.||++||
T Consensus 181 ~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp 257 (267)
T cd06646 181 EKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM--SKSNFQPPKLK-DKTKWSSTFHNFVKISLTKNPKKRP 257 (267)
T ss_pred ccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee--ecCCCCCCCCc-cccccCHHHHHHHHHHhhCChhhCc
Confidence 22445679999999998885544444322111111000 01111111111 1124578999999999999999999
Q ss_pred CHHHHhcCCC
Q psy8260 378 TAEQALAHPY 387 (427)
Q Consensus 378 ta~e~L~Hp~ 387 (427)
|++++|+|+|
T Consensus 258 ~~~~il~~l~ 267 (267)
T cd06646 258 TAERLLTHLF 267 (267)
T ss_pred CHHHHhcCCC
Confidence 9999999998
No 208
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.4e-36 Score=288.69 Aligned_cols=260 Identities=29% Similarity=0.501 Sum_probs=185.8
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|++.+.||.|+||.||. +.+..+++.||||++............+.+|+++++.++|+||+++++++... ..
T Consensus 2 ~y~~~~~i~~g~~~~v~~-~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~ 74 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLK-CRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK------GR 74 (288)
T ss_pred ceeEEEEecccCCeeEEE-EEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC------CE
Confidence 578889999999999996 45667899999998865433334456678999999999999999999988653 46
Q ss_pred EEEEeccCCCCHHH-HHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 145 VYMVTHLMGADLNN-ILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 145 ~~lv~e~~g~~L~~-~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
.+++++++++.+.. +.+. ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 75 LYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 78999999655544 4433 458999999999999999999999999999999999999999999999999987543221
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW- 301 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~- 301 (427)
.. ......++.+|+|||++.+.
T Consensus 155 ~~---------------------------------------------------------~~~~~~~~~~~~~PE~~~~~~ 177 (288)
T cd07833 155 AS---------------------------------------------------------PLTDYVATRWYRAPELLVGDT 177 (288)
T ss_pred cc---------------------------------------------------------cccCcccccCCcCCchhcCCC
Confidence 00 00112345556666666554
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh--------------cCCC---------CCcccHHhhcCC-C
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN--------------SLPL---------LTKKDFRQVFKG-A 357 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~--------------~~~~---------~~~~~~~~~~~~-~ 357 (427)
.+..++|+||+|++++.+-++..+|......+....... ..+. .....+...++. .
T Consensus 178 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (288)
T cd07833 178 NYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKV 257 (288)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCcc
Confidence 455677999999988777554433321110000000000 0000 001111222222 4
Q ss_pred ChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 358 NPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 358 s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
++++++||.+||..||++|||++++++||||
T Consensus 258 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 258 SSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred chHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 8899999999999999999999999999998
No 209
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.6e-36 Score=290.85 Aligned_cols=270 Identities=31% Similarity=0.484 Sum_probs=189.9
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc---
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT--- 137 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--- 137 (427)
...+.|++.+.+|.|+||.||++. +..+|+.||||++..............+|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKAR-DKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEE-ECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 345678889999999999999754 5568899999998654322223345678999999999999999999876532
Q ss_pred -cccCCceEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCC
Q psy8260 138 -CLADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214 (427)
Q Consensus 138 -~~~~~~~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGl 214 (427)
...+...++++++++++++...+.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 83 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred hccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence 0112236899999998888877764 3689999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
+......... ......+++.|+|
T Consensus 163 ~~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~~ 185 (302)
T cd07864 163 ARLYNSEESR---------------------------------------------------------PYTNKVITLWYRP 185 (302)
T ss_pred cccccCCccc---------------------------------------------------------ccccceeccCccC
Confidence 8754321100 0001123445666
Q ss_pred hHHhhhc-cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc--------------CCCC--------CcccHH
Q psy8260 295 PEIMLNW-MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS--------------LPLL--------TKKDFR 351 (427)
Q Consensus 295 PEvl~~~-~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~--------------~~~~--------~~~~~~ 351 (427)
||++.+. .+...+|+|++|++++.+.++..+|............... .+.. ......
T Consensus 186 PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (302)
T cd07864 186 PELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLR 265 (302)
T ss_pred hHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchh
Confidence 6655432 2345678999998887774444333221111111111100 0000 001122
Q ss_pred hhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 352 QVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 352 ~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
..+...++.+.+||.+||+.||.+|||++|++.||||
T Consensus 266 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 266 EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 2344568899999999999999999999999999997
No 210
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2e-36 Score=289.08 Aligned_cols=259 Identities=30% Similarity=0.493 Sum_probs=185.1
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|.+.+.||.|+||.||.+ .+..+++.||+|++..........+.+.+|+++++.++||||+++++++... ..
T Consensus 2 ~y~~~~~lg~g~~~~vy~~-~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~ 74 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKC-KHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK------KR 74 (286)
T ss_pred ceeEeeeeccCCCeEEEEE-EECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC------Ce
Confidence 4677899999999999974 4566799999998865443333445677899999999999999999987543 46
Q ss_pred EEEEeccCC-CCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 145 VYMVTHLMG-ADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 145 ~~lv~e~~g-~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
.|++++++. +.|..+... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 75 LYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred EEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 789998884 566665543 458999999999999999999999999999999999999999999999999986432211
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW- 301 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~- 301 (427)
. ......++..|+|||++.+.
T Consensus 155 ~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 176 (286)
T cd07846 155 E----------------------------------------------------------VYTDYVATRWYRAPELLVGDT 176 (286)
T ss_pred c----------------------------------------------------------ccCcccceeeccCcHHhcccc
Confidence 0 00112345556666665432
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc----------------------CCCC-CcccHHhhcCCCC
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS----------------------LPLL-TKKDFRQVFKGAN 358 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~----------------------~~~~-~~~~~~~~~~~~s 358 (427)
.+..++|+||+|++++.+.++..+|......+...+.... .+.. ........++..+
T Consensus 177 ~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (286)
T cd07846 177 KYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLS 256 (286)
T ss_pred ccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcC
Confidence 2445679999999988775543333111100000000000 0000 0111223345678
Q ss_pred hhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 359 PQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 359 ~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
..+.+||.+||+.||.+|||++++++||||
T Consensus 257 ~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 257 GLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 899999999999999999999999999998
No 211
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.1e-36 Score=283.41 Aligned_cols=261 Identities=20% Similarity=0.373 Sum_probs=188.2
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~ 141 (427)
.++|++.+.||.|+||.||.+ .+..+++.||+|.+.... .....+.+|+.+++++ +|+||+++++++........
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~-~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKA-RHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEE-EECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 467889999999999999965 456678999999886432 2335577899999998 79999999999876443223
Q ss_pred CceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...++++++++ +++|.+++.. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 45678999988 5688877643 46899999999999999999999999999999999999999999999999988
Q ss_pred CCCCCC---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 216 RPTENE---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 216 ~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
...... .....++..|+|||++.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-------------------------------------------------- 190 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQ-------------------------------------------------- 190 (275)
T ss_pred eecccchhhhcCccccccccCHhHhccccc--------------------------------------------------
Confidence 643221 122334444555554321000
Q ss_pred cchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 293 RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 293 ~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
....+..++|+|++|++++.+.++..+|.................. ... .....++++++||.+||..|
T Consensus 191 ------~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~li~~~l~~d 259 (275)
T cd06608 191 ------PDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP----TLK-SPENWSKKFNDFISECLIKN 259 (275)
T ss_pred ------ccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC----CCC-chhhcCHHHHHHHHHHhhcC
Confidence 0012345679999999998886666555432211122221111110 000 01235678999999999999
Q ss_pred CCCCCCHHHHhcCCCC
Q psy8260 373 SEKRITAEQALAHPYL 388 (427)
Q Consensus 373 P~~R~ta~e~L~Hp~f 388 (427)
|.+|||++|+++|||+
T Consensus 260 p~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 260 YEQRPFMEELLEHPFI 275 (275)
T ss_pred hhhCcCHHHHhcCCCC
Confidence 9999999999999996
No 212
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=7e-36 Score=281.23 Aligned_cols=253 Identities=23% Similarity=0.368 Sum_probs=191.3
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++.+.+|.|+||.||+ +.+..+|..||+|.+..........+++.+|+++++.++||||+++++++... .....
T Consensus 2 y~~~~~lg~g~~~~v~~-~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~ 76 (265)
T cd08217 2 YEVLETIGKGSFGTVRK-VRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR----SNQTL 76 (265)
T ss_pred ceeeeeeccCCCeEEEE-eeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC----CCCEE
Confidence 56778999999999996 45667899999999876555555566788999999999999999999877532 12457
Q ss_pred EEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHH-----hcCceeccCCCCCeEEcCCCCEEEeeCCC
Q psy8260 146 YMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIH-----SAGIIHRDLKPSNIAVNEDCELKILDFGL 214 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH-----~~~iiHrDLKp~NILl~~~~~~kl~DFGl 214 (427)
++++|++ +++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+
T Consensus 77 ~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 77 YIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred EEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccc
Confidence 8889887 6789888753 46899999999999999999999 89999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
+........ ...+..|++.|+|
T Consensus 157 ~~~~~~~~~----------------------------------------------------------~~~~~~~~~~~~~ 178 (265)
T cd08217 157 AKILGHDSS----------------------------------------------------------FAKTYVGTPYYMS 178 (265)
T ss_pred cccccCCcc----------------------------------------------------------cccccccCCCccC
Confidence 875432110 0112235666777
Q ss_pred hHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 295 PEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 295 PEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
||++.+..+...+|+|++|++++.+.++..++..... .......... . ........++++.+||.+||+.||+
T Consensus 179 pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~-~-----~~~~~~~~~~~~~~l~~~~l~~~p~ 251 (265)
T cd08217 179 PEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-LQLASKIKEG-K-----FRRIPYRYSSELNEVIKSMLNVDPD 251 (265)
T ss_pred hhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-HHHHHHHhcC-C-----CCCCccccCHHHHHHHHHHccCCcc
Confidence 7777665566678999999998777555555433221 1111111111 1 1112234578999999999999999
Q ss_pred CCCCHHHHhcCCCC
Q psy8260 375 KRITAEQALAHPYL 388 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f 388 (427)
+|||++|+++|||+
T Consensus 252 ~Rp~~~~il~~~~~ 265 (265)
T cd08217 252 KRPSTEELLQLPLI 265 (265)
T ss_pred cCCCHHHHhhCCCC
Confidence 99999999999996
No 213
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.7e-36 Score=288.51 Aligned_cols=273 Identities=19% Similarity=0.270 Sum_probs=198.0
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.|++.+.+|+|+||.||. +.+..+++.||+|.+...... ......+.+|+++++.++||||+++++.+..+ .
T Consensus 2 ~y~~~~~l~~g~~~~v~~-~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~ 74 (305)
T cd05609 2 DFETIKLISNGAYGAVYL-VRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK------R 74 (305)
T ss_pred CceEeeEeecCCCeeEEE-EEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC------C
Confidence 467778999999999996 557778999999988654221 22345577899999999999999999987653 4
Q ss_pred eEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+|+++|++ |++|.++++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.....
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 75 HLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 678999988 6799988865 56899999999999999999999999999999999999999999999999998742211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
......... .+.+. .........|+..|+|||.+.+.
T Consensus 155 ~~~~~~~~~-~~~~~------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~ 191 (305)
T cd05609 155 LTTNLYEGH-IEKDT------------------------------------------REFLDKQVCGTPEYIAPEVILRQ 191 (305)
T ss_pred ccccccccc-cccch------------------------------------------hhccccCCccCccccCchhccCC
Confidence 110000000 00000 00011123578889999998887
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC---
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT--- 378 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t--- 378 (427)
.+..++|+||+|++++.+.++..+|...................+. .....++++.+||.+||+.||++|+|
T Consensus 192 ~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 266 (305)
T cd05609 192 GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE-----GDEALPADAQDLISRLLRQNPLERLGTGG 266 (305)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC-----ccccCCHHHHHHHHHHhccChhhccCccC
Confidence 7888899999999998886666555432211112211111111111 11246788999999999999999998
Q ss_pred HHHHhcCCCCCCCC
Q psy8260 379 AEQALAHPYLSQYS 392 (427)
Q Consensus 379 a~e~L~Hp~f~~~~ 392 (427)
+.|+|+||||....
T Consensus 267 ~~~ll~~~~~~~~~ 280 (305)
T cd05609 267 AFEVKQHRFFLGLD 280 (305)
T ss_pred HHHHHhCccccCCC
Confidence 89999999997643
No 214
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=8.3e-36 Score=282.94 Aligned_cols=258 Identities=23% Similarity=0.391 Sum_probs=188.0
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC--------HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS--------AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~--------~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
|.+.+.||.|+||.||.+. +..+|+.||+|.+...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~lg~g~~~~vy~~~-~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 80 (272)
T cd06629 3 WVKGELIGKGTYGRVYLAL-NVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE- 80 (272)
T ss_pred eeecceecccCceEEEEEe-ecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC-
Confidence 5678899999999999754 5667999999987532111 11224567899999999999999999987643
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...++++|++ +++|.++++. ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++
T Consensus 81 -----~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 81 -----EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred -----CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 4578888877 7899988865 56899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+......... ......|+..|+||
T Consensus 156 ~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~y~~P 179 (272)
T cd06629 156 KKSDDIYDND--------------------------------------------------------QNMSMQGSVFWMAP 179 (272)
T ss_pred cccccccccc--------------------------------------------------------ccccccCCccccCH
Confidence 6432110000 01122466778888
Q ss_pred HHhhhcc--CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 296 EIMLNWM--HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 296 Evl~~~~--~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
|++.... +..++|+|++|++++.+.++..++..........+...... ...........++.++.+||.+||..||
T Consensus 180 E~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p 257 (272)
T cd06629 180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRS--APPIPPDVSMNLSPVALDFLNACFTINP 257 (272)
T ss_pred HHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcccc--CCcCCccccccCCHHHHHHHHHHhcCCh
Confidence 8776544 56678999999999877666555532211111111111100 0000111223467899999999999999
Q ss_pred CCCCCHHHHhcCCCC
Q psy8260 374 EKRITAEQALAHPYL 388 (427)
Q Consensus 374 ~~R~ta~e~L~Hp~f 388 (427)
.+|||++|+|+||||
T Consensus 258 ~~Rps~~~il~~~~~ 272 (272)
T cd06629 258 DNRPTARELLQHPFI 272 (272)
T ss_pred hhCCCHHHHhhCCCC
Confidence 999999999999997
No 215
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.6e-36 Score=295.15 Aligned_cols=259 Identities=22% Similarity=0.297 Sum_probs=188.6
Q ss_pred ccccCcceeeccccCcccccEEEEeEE----eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSAL----DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVF 133 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~----~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~ 133 (427)
|++...+|++.+.||.|+||.||.+.. +..+++.||+|++.... .......+.+|+.++.++ +|+||+++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~ 80 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGAC 80 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence 456667899999999999999997643 33467899999886432 333445677899999999 899999999886
Q ss_pred ecCccccCCceEEEEeccC-CCCHHHHHhh--------------------------------------------------
Q psy8260 134 HSNTCLADFKNVYMVTHLM-GADLNNILRT-------------------------------------------------- 162 (427)
Q Consensus 134 ~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~-------------------------------------------------- 162 (427)
... ...++++++++ +++|.+++..
T Consensus 81 ~~~-----~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (337)
T cd05054 81 TKP-----GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD 155 (337)
T ss_pred ecC-----CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhh
Confidence 532 24577888877 7889887742
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccccccc
Q psy8260 163 ------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 230 (427)
Q Consensus 163 ------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~ 230 (427)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~------- 228 (337)
T cd05054 156 VEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------- 228 (337)
T ss_pred cccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-------
Confidence 2578888999999999999999999999999999999999999999999999875321100
Q ss_pred ccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHH
Q psy8260 231 YRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIH 310 (427)
Q Consensus 231 y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~ 310 (427)
.. ......+++.|+|||++.+..+..++|+|
T Consensus 229 -----~~--------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 259 (337)
T cd05054 229 -----YV--------------------------------------------RKGDARLPLKWMAPESIFDKVYTTQSDVW 259 (337)
T ss_pred -----hh--------------------------------------------hccCCCCCccccCcHHhcCCCCCccccHH
Confidence 00 00012345678888888877788889999
Q ss_pred HHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 311 QLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 311 slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
|+|++++.+.+ +..+|......+.....+...... ......++++.+++.+||+.||++|||++|+++|
T Consensus 260 SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 260 SFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999987532 333332211112111111111100 0113457889999999999999999999999986
No 216
>KOG0603|consensus
Probab=100.00 E-value=5.7e-37 Score=304.42 Aligned_cols=242 Identities=24% Similarity=0.369 Sum_probs=186.0
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~ 142 (427)
..+.+...+|.|+|+.|-+ +.+..+++..|+|++.+... ...+|+.++... +||||+++.+++...
T Consensus 322 ~~y~~~~~~~~gs~s~~~~-~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~~------ 388 (612)
T KOG0603|consen 322 ESYEFREELGEGSFSAVKY-CESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYEDG------ 388 (612)
T ss_pred hhhccccccCCCCccceee-eeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceecCC------
Confidence 4567777899999987764 56778899999999976521 233577555544 899999999998654
Q ss_pred ceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEE-cCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV-NEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl-~~~~~~kl~DFGla~~~~~ 220 (427)
.+.|+||+.+ |+.+.+-+...+.....+..|++||+.|+.|||++|||||||||+|||+ +..+.++|+|||.++....
T Consensus 389 ~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 389 KEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred ceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 5789999988 4444444444443347888999999999999999999999999999999 6889999999998875443
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... +.+-|..|.||||+..
T Consensus 469 ~~~-------------------------------------------------------------tp~~t~~y~APEvl~~ 487 (612)
T KOG0603|consen 469 SCD-------------------------------------------------------------TPALTLQYVAPEVLAI 487 (612)
T ss_pred hhc-------------------------------------------------------------ccchhhcccChhhhcc
Confidence 311 1234566778888777
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
..+...+||||||+++|.|.++..+|..........+.+. .+. ++ ..+|++|+|||++||++||.+|+|+.
T Consensus 488 ~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~-~~~-----~s---~~vS~~AKdLl~~LL~~dP~~Rl~~~ 558 (612)
T KOG0603|consen 488 QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ-MPK-----FS---ECVSDEAKDLLQQLLQVDPALRLGAD 558 (612)
T ss_pred CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc-CCc-----cc---cccCHHHHHHHHHhccCChhhCcChh
Confidence 7789999999999999999888877765543322222211 111 11 56899999999999999999999999
Q ss_pred HHhcCCCC
Q psy8260 381 QALAHPYL 388 (427)
Q Consensus 381 e~L~Hp~f 388 (427)
|++.||||
T Consensus 559 ~i~~h~w~ 566 (612)
T KOG0603|consen 559 EIGAHPWF 566 (612)
T ss_pred hhccCcch
Confidence 99999999
No 217
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.7e-36 Score=286.32 Aligned_cols=261 Identities=23% Similarity=0.296 Sum_probs=190.4
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|+..+.||.|++|.||.+ .+..+++.||+|.+.... ......++.+|+++++.++||||++++++|... ....
T Consensus 2 ~~~~~~~lg~g~~~~v~~~-~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~ 75 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKC-RLKNTGMIFALKTITTDP-NPDLQKQILRELEINKSCKSPYIVKYYGAFLDE----SSSS 75 (287)
T ss_pred ceEEEEEeccCCceEEEEE-EECCCCeEEEEEEEecCC-chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc----CCCe
Confidence 4677789999999999964 556689999999886542 234456688999999999999999999987542 2245
Q ss_pred EEEEeccC-CCCHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
+|++++++ +++|.+++. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 78999988 678887654 245889999999999999999999999999999999999999999999999987643
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
..... ....++..|+|||.+
T Consensus 156 ~~~~~------------------------------------------------------------~~~~~~~~y~~pE~~ 175 (287)
T cd06621 156 VNSLA------------------------------------------------------------GTFTGTSFYMAPERI 175 (287)
T ss_pred ccccc------------------------------------------------------------ccccCCccccCHHHh
Confidence 21100 011345567777777
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhc----CcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKI----SSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
.+..+..++|+|++|++++.+.++..++.... .......+...............-...++++.+||.+||+.||.
T Consensus 176 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 255 (287)
T cd06621 176 QGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPT 255 (287)
T ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcc
Confidence 66667778899999999988866655553321 11111112111111000000000012356889999999999999
Q ss_pred CCCCHHHHhcCCCCCCC
Q psy8260 375 KRITAEQALAHPYLSQY 391 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f~~~ 391 (427)
+|||+.|+++||||.+.
T Consensus 256 ~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 256 RRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred cCCCHHHHHhCcccccc
Confidence 99999999999999654
No 218
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1e-35 Score=281.83 Aligned_cols=252 Identities=18% Similarity=0.233 Sum_probs=187.4
Q ss_pred cCcceeeccccCcccccEEEEeEEe--CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~--~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
....|.+.+.||+|+||.||.+... ...+..||+|.+.... .......+.+|+.++++++||||+++++++...
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 78 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG--- 78 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC---
Confidence 4567889999999999999987654 3456789999987543 233445678999999999999999999987643
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
...+++||++ +++|.+++.. ..+++..+..++.|++.||+|||++|++||||||+|||++.++.+|++|||.+.
T Consensus 79 ---~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~ 155 (266)
T cd05064 79 ---NTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQ 155 (266)
T ss_pred ---CCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccc
Confidence 4578999988 6789988865 368999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
....... . ......++..|+|||
T Consensus 156 ~~~~~~~--------------~-------------------------------------------~~~~~~~~~~y~aPE 178 (266)
T cd05064 156 EDKSEAI--------------Y-------------------------------------------TTMSGKSPVLWAAPE 178 (266)
T ss_pred cccccch--------------h-------------------------------------------cccCCCCceeecCHH
Confidence 3211100 0 000123456788999
Q ss_pred HhhhccCCCCCCHHHHHHHHHH-hCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEM-LGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
++.+..+..++|+||+|++++. +.++..||........... ....... ......+..+.+++.+|++.||.+
T Consensus 179 ~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~li~~c~~~~p~~ 251 (266)
T cd05064 179 AIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKA-VEDGFRL------PAPRNCPNLLHQLMLDCWQKERGE 251 (266)
T ss_pred HHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH-HHCCCCC------CCCCCCCHHHHHHHHHHcCCCchh
Confidence 8887777788999999999876 4334444433221111111 1111111 112345678999999999999999
Q ss_pred CCCHHHHhc
Q psy8260 376 RITAEQALA 384 (427)
Q Consensus 376 R~ta~e~L~ 384 (427)
|||++|+++
T Consensus 252 RP~~~~i~~ 260 (266)
T cd05064 252 RPRFSQIHS 260 (266)
T ss_pred CCCHHHHHH
Confidence 999999875
No 219
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.4e-36 Score=282.57 Aligned_cols=257 Identities=19% Similarity=0.256 Sum_probs=187.5
Q ss_pred eeeccccCcccccEEEEeEEeC--cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 66 IDIGPTLSKESFDLIFSSALDS--VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~--~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
|.+++.+|+|+||.||.+.... .++..||||++............+.+|+.+++.++||||+++++++..........
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4578899999999999876533 34588999998765444555567889999999999999999999875443322334
Q ss_pred eEEEEeccC-CCCHHHHHhh-------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
..+++++++ +++|..++.. ..+++..+..++.|++.||.|||+++|+||||||+||++++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 467888776 7899887732 25889999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+......... ......++..|+||
T Consensus 161 ~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~p 184 (273)
T cd05035 161 KKIYSGDYYR--------------------------------------------------------QGRIAKMPVKWIAI 184 (273)
T ss_pred eecccccccc--------------------------------------------------------ccccccCCccccCH
Confidence 7543211000 00011234568888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+..+..++|+||+|++++.+.+ +..+|... ......+........ ......++++.++|.+||+.||.
T Consensus 185 e~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~ 257 (273)
T cd05035 185 ESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV-ENHEIYDYLRHGNRL------KQPEDCLDELYDLMYSCWRADPK 257 (273)
T ss_pred hhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCCCC------CCCcCCCHHHHHHHHHHcCCChh
Confidence 88877777788999999999988744 33333221 111121222111111 12235678999999999999999
Q ss_pred CCCCHHHHhcC
Q psy8260 375 KRITAEQALAH 385 (427)
Q Consensus 375 ~R~ta~e~L~H 385 (427)
+|||+.|++++
T Consensus 258 ~Rp~~~e~~~~ 268 (273)
T cd05035 258 DRPTFTKLREV 268 (273)
T ss_pred hCcCHHHHHHH
Confidence 99999999875
No 220
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.9e-36 Score=285.15 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=192.8
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
|.+.+.+|.|+||.||.+ .+..++..||+|.+.+.... ....+.+.+|++++++++||||+++++.+... ..
T Consensus 2 y~~~~~i~~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~ 74 (258)
T cd05578 2 FELLRVIGKGAFGKVCIV-QKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE------EN 74 (258)
T ss_pred ceEEEEeccCCCceEEEE-EEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC------Ce
Confidence 677889999999999964 56678999999998654322 23456778999999999999999999887643 45
Q ss_pred EEEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 145 VYMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
.+++++++ +++|...+... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 75 MYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred EEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 78888877 78999888765 79999999999999999999999999999999999999999999999999876432210
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
......|+..|+|||++.+..
T Consensus 155 -----------------------------------------------------------~~~~~~~~~~y~~PE~~~~~~ 175 (258)
T cd05578 155 -----------------------------------------------------------LTTSTSGTPGYMAPEVLCRQG 175 (258)
T ss_pred -----------------------------------------------------------cccccCCChhhcCHHHHcccC
Confidence 001123566777888777666
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH--H
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA--E 380 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta--~ 380 (427)
+..++|+|++|++++.+.++..++...... ....+...... .........++++.++|.+||+.||.+|+|+ +
T Consensus 176 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~ 250 (258)
T cd05578 176 YSVAVDWWSLGVTAYECLRGKRPYRGHSRT-IRDQIRAKQET----ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLK 250 (258)
T ss_pred CCCcccchhhHHHHHHHHhCCCCCCCCCcc-HHHHHHHHhcc----ccccCcccCcHHHHHHHHHHccCChhHcCCccHH
Confidence 777889999999998886666555433221 11111111110 0011223457899999999999999999999 9
Q ss_pred HHhcCCCC
Q psy8260 381 QALAHPYL 388 (427)
Q Consensus 381 e~L~Hp~f 388 (427)
|+++||||
T Consensus 251 ~l~~~~~~ 258 (258)
T cd05578 251 DLKNHPYF 258 (258)
T ss_pred HHhcCCCC
Confidence 99999998
No 221
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.9e-36 Score=285.67 Aligned_cols=252 Identities=22% Similarity=0.316 Sum_probs=187.3
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEec
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e 150 (427)
||+|+||.||. +.+..+|+.||+|.+...... ......+.+|+++++.++||||++++++|... ...|++++
T Consensus 1 lg~g~~g~vy~-~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~~lv~e 73 (277)
T cd05577 1 LGKGGFGEVCA-CQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK------DDLCLVMT 73 (277)
T ss_pred CCCCCceeEEE-EEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC------CeEEEEEe
Confidence 68999999995 556778999999988643222 22234456899999999999999999988653 45789998
Q ss_pred cC-CCCHHHHHhh-C--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccc
Q psy8260 151 LM-GADLNNILRT-Q--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 226 (427)
Q Consensus 151 ~~-g~~L~~~l~~-~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 226 (427)
++ +++|.+++.. . .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 74 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---- 149 (277)
T cd05577 74 LMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---- 149 (277)
T ss_pred cCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC----
Confidence 87 6799888754 3 58999999999999999999999999999999999999999999999999876432110
Q ss_pred ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCC
Q psy8260 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306 (427)
Q Consensus 227 gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~ 306 (427)
......++..|+|||++.+..+..+
T Consensus 150 -------------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~ 174 (277)
T cd05577 150 -------------------------------------------------------KIKGRAGTPGYMAPEVLQGEVYDFS 174 (277)
T ss_pred -------------------------------------------------------ccccccCCCCcCCHHHhcCCCCCch
Confidence 0011235566778887766666677
Q ss_pred CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-----CHHH
Q psy8260 307 TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-----TAEQ 381 (427)
Q Consensus 307 ~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-----ta~e 381 (427)
+|+|++|++++.+.++..+|.................. .........++++.+||.+||+.||.+|+ |+++
T Consensus 175 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ 250 (277)
T cd05577 175 VDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE----MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADE 250 (277)
T ss_pred hhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc----ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHH
Confidence 89999999998886665555332211111111111000 00112234688999999999999999999 9999
Q ss_pred HhcCCCCCCCCC
Q psy8260 382 ALAHPYLSQYSD 393 (427)
Q Consensus 382 ~L~Hp~f~~~~~ 393 (427)
+++||||.+...
T Consensus 251 ll~h~~~~~~~~ 262 (277)
T cd05577 251 VREHPLFKDLNW 262 (277)
T ss_pred HHhChhhhcCCh
Confidence 999999986544
No 222
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-35 Score=284.35 Aligned_cols=256 Identities=21% Similarity=0.437 Sum_probs=192.7
Q ss_pred eeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEE
Q psy8260 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVY 146 (427)
Q Consensus 67 ~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 146 (427)
...+.||.|++|.||+ +.+..+++.||+|++... .....+.+.+|+.+++.++||||+++++++... ...+
T Consensus 22 ~~~~~lg~g~~g~v~~-~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~------~~~~ 92 (285)
T cd06648 22 DNFVKIGEGSTGIVCI-ATDKSTGRQVAVKKMDLR--KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG------DELW 92 (285)
T ss_pred hcceEeccCCCeEEEE-EEECCCCCEEEEEEEecc--chhHHHHHHHHHHHHHHcCCCChheEEEEEEcC------CeEE
Confidence 3346899999999996 456678899999988542 223345577999999999999999999987643 3567
Q ss_pred EEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 147 MVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 147 lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
++++++ +++|.+++....+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++........
T Consensus 93 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-- 170 (285)
T cd06648 93 VVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-- 170 (285)
T ss_pred EEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--
Confidence 888877 78999988878899999999999999999999999999999999999999999999999998753321100
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
......|++.|+|||++.+..+..
T Consensus 171 --------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ 194 (285)
T cd06648 171 --------------------------------------------------------RRKSLVGTPYWMAPEVISRLPYGT 194 (285)
T ss_pred --------------------------------------------------------ccccccCCccccCHHHhcCCCCCC
Confidence 001224667788888777666777
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
++|+|++|++++.+.++..+|................+.. ......+++.+.+||.+||+.||.+|||+.++++|
T Consensus 195 ~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 195 EVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPK-----LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred cccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCC-----CcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 8899999999988766555553322111111111111100 01112367889999999999999999999999999
Q ss_pred CCCCCCCCC
Q psy8260 386 PYLSQYSDP 394 (427)
Q Consensus 386 p~f~~~~~~ 394 (427)
|||.+...|
T Consensus 270 ~~~~~~~~~ 278 (285)
T cd06648 270 PFLAKAGPP 278 (285)
T ss_pred cccccCCCc
Confidence 999886544
No 223
>KOG4645|consensus
Probab=100.00 E-value=2.6e-38 Score=332.52 Aligned_cols=259 Identities=25% Similarity=0.342 Sum_probs=197.4
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.-+..+|.|.||.|| -+.+..+|...|+|-+..............+|..++..++|||+|+.|++=.+. +.+
T Consensus 1237 Wqrg~~Ig~G~fG~VY-tavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR------ekv 1309 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVY-TAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR------EKV 1309 (1509)
T ss_pred eccccccCCcceeeeE-EeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH------HHH
Confidence 4556789999999999 467889999999998875444433445567899999999999999999984432 467
Q ss_pred EEEeccC-CCCHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 146 YMVTHLM-GADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~~-l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
||.|||| ||+|.++++.++ .++...+.+..|++.|+.|||++|||||||||+||+++.+|.+|++|||.|+...+...
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence 8999999 889999997654 66777788899999999999999999999999999999999999999999975544321
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc-
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM- 302 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~- 302 (427)
+ +++| +.+..|||.||||||+.+..
T Consensus 1390 ~-------~~~e-----------------------------------------------l~~~~GT~~YMAPEvit~t~~ 1415 (1509)
T KOG4645|consen 1390 T-------MPGE-----------------------------------------------LQSMMGTPMYMAPEVITGTKG 1415 (1509)
T ss_pred c-------CCHH-----------------------------------------------HHhhcCCchhcCchhhccccc
Confidence 1 1222 22446888888888887543
Q ss_pred --CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 303 --HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 303 --~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
.+...|||||||++-+|.++..||..-... -.-=|.-.... .+++...+|++++|||.+||+-||++|+|+.
T Consensus 1416 kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~aIMy~V~~gh-----~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~ 1489 (1509)
T KOG4645|consen 1416 KGHGGAADIWSLGCVVLEMATGKRPWAELDNE-WAIMYHVAAGH-----KPQIPERLSSEGRDFLEHCLEQDPKMRWTAS 1489 (1509)
T ss_pred CCCCcchhhhcccceEEEeecCCCchhhccch-hHHHhHHhccC-----CCCCchhhhHhHHHHHHHHHhcCchhhhHHH
Confidence 445569999999998888887776432211 11111111111 1123344899999999999999999999999
Q ss_pred HHhcCCCCCCC
Q psy8260 381 QALAHPYLSQY 391 (427)
Q Consensus 381 e~L~Hp~f~~~ 391 (427)
|+|+|-|-+..
T Consensus 1490 qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1490 QLLEHAFGKSC 1500 (1509)
T ss_pred HHHHhhccccc
Confidence 99999997643
No 224
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8e-36 Score=280.02 Aligned_cols=250 Identities=24% Similarity=0.327 Sum_probs=189.1
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.||.|+||.||. +.+..+++.+|||.+............+.+|+++++.++||||+++++.+... ...
T Consensus 2 y~~~~~lg~g~~~~v~~-~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~~ 74 (256)
T cd08220 2 YEKIRVVGRGAFGIVHL-CRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED------KAL 74 (256)
T ss_pred ceEEEEecccCceEEEE-EEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC------CEE
Confidence 56778999999999996 45667899999999876544445566788999999999999999999887543 457
Q ss_pred EEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC-CCEEEeeCCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARPTEN 220 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~-~~~kl~DFGla~~~~~ 220 (427)
+++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.+ +.+||+|||++.....
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 75 MIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 8888887 6799998864 248999999999999999999999999999999999999854 5689999999865422
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... .....|++.|+|||++.+
T Consensus 155 ~~~-----------------------------------------------------------~~~~~~~~~y~aPE~~~~ 175 (256)
T cd08220 155 KSK-----------------------------------------------------------AYTVVGTPCYISPELCEG 175 (256)
T ss_pred Ccc-----------------------------------------------------------ccccccCCcccCchhccC
Confidence 110 001235666777777766
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
..+..++|+||+|++++.+.++..+|................ ........++++.+||.+||+.||.+|||++
T Consensus 176 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 248 (256)
T cd08220 176 KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-------FAPISDRYSPDLRQLILSMLNLDPSKRPQLS 248 (256)
T ss_pred CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC-------CCCCCCCcCHHHHHHHHHHccCChhhCCCHH
Confidence 666677899999999988755544443222111111111111 0112234678999999999999999999999
Q ss_pred HHhcCCCC
Q psy8260 381 QALAHPYL 388 (427)
Q Consensus 381 e~L~Hp~f 388 (427)
|+++||||
T Consensus 249 ~ll~~p~~ 256 (256)
T cd08220 249 QIMAQPIC 256 (256)
T ss_pred HHhhCCCC
Confidence 99999997
No 225
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=9.1e-36 Score=284.39 Aligned_cols=262 Identities=32% Similarity=0.514 Sum_probs=188.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC---CCCCceeeeeeeecCccccCC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM---NHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l---~HpnIv~l~~~~~~~~~~~~~ 142 (427)
|++.+.||.|+||.||.+. +..+++.||+|++............+.+|+.+++++ +||||+++++++..... ...
T Consensus 1 y~~~~~l~~g~~~~v~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~-~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKAR-DLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT-DRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEE-ECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC-CCC
Confidence 4567889999999999765 455799999999875433333334456787776655 69999999999875422 122
Q ss_pred ceEEEEeccCCCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..+++++++++++|.+++.. ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.+||+|||++....
T Consensus 79 ~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 79 LKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred ceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 34789999998888887754 258999999999999999999999999999999999999999999999999886432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
... ......+++.|+|||++.
T Consensus 159 ~~~-----------------------------------------------------------~~~~~~~~~~~~~PE~~~ 179 (287)
T cd07838 159 FEM-----------------------------------------------------------ALTSVVVTLWYRAPEVLL 179 (287)
T ss_pred CCc-----------------------------------------------------------ccccccccccccChHHhc
Confidence 110 001123566777777777
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcC-------------------CCCCcccHHhhcCCCChh
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSL-------------------PLLTKKDFRQVFKGANPQ 360 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~s~~ 360 (427)
+..+..++|+|++|++++.|.++..+|......+...+..... +......+....+..+++
T Consensus 180 ~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (287)
T cd07838 180 QSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEE 259 (287)
T ss_pred cCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHH
Confidence 6667778899999999987755444443222111111111100 011111222333456788
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 361 AIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 361 ~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
+.+||.+||+.||.+|||++|+++||||
T Consensus 260 ~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 260 GLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred HHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 9999999999999999999999999997
No 226
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.5e-36 Score=285.75 Aligned_cols=258 Identities=36% Similarity=0.570 Sum_probs=188.2
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.+|.|+||.||.+ ....+++.||+|.+............+.+|+.+++.++|+||+++++++... ...
T Consensus 1 y~~~~~ig~g~~~~vy~~-~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~~ 73 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKA-RDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE------RKL 73 (282)
T ss_pred CeeehcccccCcceEEEe-eecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC------Cce
Confidence 345678999999999964 4566799999999876543333345667899999999999999999987643 467
Q ss_pred EEEeccCCCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 146 YMVTHLMGADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
++++++++++|.+++... .+++..+..++.|++.||.|||++||+||||+|+||+++.++.+||+|||+++.......
T Consensus 74 ~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 74 YLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred EEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 899999988999988764 799999999999999999999999999999999999999999999999999875432110
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-c
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-M 302 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-~ 302 (427)
. .....++..|+|||++... .
T Consensus 154 ~----------------------------------------------------------~~~~~~~~~~~aPE~~~~~~~ 175 (282)
T cd07829 154 T----------------------------------------------------------YTHEVVTLWYRAPEILLGSKH 175 (282)
T ss_pred c----------------------------------------------------------cCccccCcCcCChHHhcCCcC
Confidence 0 0011234455566655433 3
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHH---------------------HhcCCCCCcccHHhhcCCCChhH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKY---------------------INSLPLLTKKDFRQVFKGANPQA 361 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~s~~~ 361 (427)
+..+.|+|++|++++.+.++..+|..........+. ....+..........++..+.++
T Consensus 176 ~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (282)
T cd07829 176 YSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEG 255 (282)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHH
Confidence 455678999998887665544333221111110000 00112222223334455668899
Q ss_pred HHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 362 IDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 362 ~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
.++|.+||+.||++|||++|+++||||
T Consensus 256 ~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 256 IDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred HHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 999999999999999999999999998
No 227
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=9.4e-36 Score=282.42 Aligned_cols=255 Identities=20% Similarity=0.249 Sum_probs=182.5
Q ss_pred eeccccCcccccEEEEeEEeCcCC--cEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 67 DIGPTLSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 67 ~~~~~lg~g~fg~v~~~~~~~~~g--~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.+++.||+|+||.||.+... .++ ..||+|.+............+.+|+++++.++||||+++++++...........
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~-~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLN-QDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEc-cCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 56789999999999987653 334 369999887654455556778899999999999999999987543221112234
Q ss_pred EEEEeccC-CCCHHHHHhh-------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT-------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~-------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
.+++++++ +++|.+++.. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 56677766 6898877631 247899999999999999999999999999999999999999999999999987
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
.......... .....+++.|+|||
T Consensus 161 ~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~pe 184 (272)
T cd05075 161 KIYNGDYYRQ--------------------------------------------------------GRIAKMPVKWIAIE 184 (272)
T ss_pred ccCcccceec--------------------------------------------------------CCcccCCcccCCHH
Confidence 5432110000 00112456688888
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
++.+..+...+|+||+|++++.+.+ +..+|... ............... ......+..+.++|.+||+.||.+
T Consensus 185 ~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~ 257 (272)
T cd05075 185 SLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV-ENSEIYDYLRQGNRL------KQPPDCLDGLYSLMSSCWLLNPKD 257 (272)
T ss_pred HccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHcCCCC------CCCCCCCHHHHHHHHHHcCCCccc
Confidence 8877777778899999999987744 33333221 111222222211111 111345678999999999999999
Q ss_pred CCCHHHHhcC
Q psy8260 376 RITAEQALAH 385 (427)
Q Consensus 376 R~ta~e~L~H 385 (427)
|||+++++++
T Consensus 258 Rps~~~l~~~ 267 (272)
T cd05075 258 RPSFETLRCE 267 (272)
T ss_pred CcCHHHHHHH
Confidence 9999999864
No 228
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.6e-36 Score=287.56 Aligned_cols=257 Identities=40% Similarity=0.641 Sum_probs=188.2
Q ss_pred eeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEE
Q psy8260 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVY 146 (427)
Q Consensus 67 ~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 146 (427)
.+.+.||.|++|.||. +.+..+|+.+|+|.+............+.+|+++++.++|+||+++++++... ...+
T Consensus 2 ~~~~~i~~g~~~~v~~-~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~~ 74 (283)
T cd05118 2 QKLGKIGEGTYGVVYK-ARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK------GDLY 74 (283)
T ss_pred ccceeeecCCCceEEE-EEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC------CCEE
Confidence 4567899999999996 45667899999999876544434456678899999999999999999987643 4678
Q ss_pred EEeccCCCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccc
Q psy8260 147 MVTHLMGADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224 (427)
Q Consensus 147 lv~e~~g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 224 (427)
++++++++++.+.+... .+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||.+........
T Consensus 75 ~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~- 153 (283)
T cd05118 75 LVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR- 153 (283)
T ss_pred EEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc-
Confidence 99999988988887653 789999999999999999999999999999999999999999999999998764432110
Q ss_pred ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-cC
Q psy8260 225 YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-MH 303 (427)
Q Consensus 225 ~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-~~ 303 (427)
......++..|+|||++.+. .+
T Consensus 154 ---------------------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~ 176 (283)
T cd05118 154 ---------------------------------------------------------PYTHYVVTRWYRAPELLLGDKGY 176 (283)
T ss_pred ---------------------------------------------------------cccCccCcccccCcHHHhcCCCC
Confidence 00011245556666666544 45
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc----------------------CCCCCcccHHhhcCCCChhH
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS----------------------LPLLTKKDFRQVFKGANPQA 361 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~s~~~ 361 (427)
..++|+|++|++++.+-++..+|......+...+.... .+...........+..++++
T Consensus 177 ~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (283)
T cd05118 177 STPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQA 256 (283)
T ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHH
Confidence 55679999998887775544333221111111111100 11111112223445578899
Q ss_pred HHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 362 IDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 362 ~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
.+||.+||+.||.+||+++|+++||||
T Consensus 257 ~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 257 LDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred HHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 999999999999999999999999997
No 229
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=7.3e-36 Score=280.29 Aligned_cols=252 Identities=23% Similarity=0.414 Sum_probs=189.3
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.+.|++.+.+|.|+||.||.+. ...+++.||+|.+.... ....+.+|+++++.++||||+++++.+...
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~-~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~------ 70 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAI-HKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKN------ 70 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEE-EcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecC------
Confidence 3567888999999999999754 45578999999885431 256678999999999999999999988654
Q ss_pred ceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...|++++++ +++|.+++.. ..+++..+..++.|++.||.|||+.+|+||||+|+||+++.++.+||+|||++....
T Consensus 71 ~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~ 150 (256)
T cd06612 71 TDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLT 150 (256)
T ss_pred CcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcc
Confidence 4578888887 5789988853 468999999999999999999999999999999999999999999999999986432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... ......|+..|+|||++.
T Consensus 151 ~~~~----------------------------------------------------------~~~~~~~~~~y~~PE~~~ 172 (256)
T cd06612 151 DTMA----------------------------------------------------------KRNTVIGTPFWMAPEVIQ 172 (256)
T ss_pred cCcc----------------------------------------------------------ccccccCCccccCHHHHh
Confidence 2110 000123566788888777
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
+..+..++|+||+|++++.+.++..++........ ... ........+ ......+.++.+||.+||+.||.+|||+
T Consensus 173 ~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~---~~~-~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rps~ 247 (256)
T cd06612 173 EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA---IFM-IPNKPPPTL-SDPEKWSPEFNDFVKKCLVKDPEERPSA 247 (256)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh---hhh-hccCCCCCC-CchhhcCHHHHHHHHHHHhcChhhCcCH
Confidence 76677788999999999877555444432111111 110 000000000 1112356789999999999999999999
Q ss_pred HHHhcCCCC
Q psy8260 380 EQALAHPYL 388 (427)
Q Consensus 380 ~e~L~Hp~f 388 (427)
.|+|+||||
T Consensus 248 ~~il~~~~~ 256 (256)
T cd06612 248 IQLLQHPFI 256 (256)
T ss_pred HHHhcCCCC
Confidence 999999997
No 230
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=6e-36 Score=293.10 Aligned_cols=277 Identities=32% Similarity=0.473 Sum_probs=195.6
Q ss_pred eccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH------------HHHHHHHHHHHHhcCCCCCceeeeeeeec
Q psy8260 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV------------HAKRTYRELRMLKHMNHENVIGLLDVFHS 135 (427)
Q Consensus 68 ~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~------------~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 135 (427)
+.+.||.|+||.||+ +.+..+++.||||++........ ....+.+|+++++.++||||+++++++..
T Consensus 13 ~~~~ig~G~~g~vy~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 91 (335)
T PTZ00024 13 KGAHLGEGTYGKVEK-AYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE 91 (335)
T ss_pred hhhcccCCCceeEEE-EEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec
Confidence 467899999999996 45667899999998864322110 01236689999999999999999999864
Q ss_pred CccccCCceEEEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCC
Q psy8260 136 NTCLADFKNVYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGl 214 (427)
. ...++++|++.++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 92 ~------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 92 G------DFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred C------CcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccc
Confidence 3 46789999998899888754 4689999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
++........ .... . +... ..........+++.|+|
T Consensus 166 ~~~~~~~~~~--~~~~----------------~------~~~~--------------------~~~~~~~~~~~~~~y~a 201 (335)
T PTZ00024 166 ARRYGYPPYS--DTLS----------------K------DETM--------------------QRREEMTSKVVTLWYRA 201 (335)
T ss_pred eeeccccccc--cccc----------------c------cccc--------------------cccccccccccccCCCC
Confidence 8754321100 0000 0 0000 00001223456888999
Q ss_pred hHHhhhcc-CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcC--------------C------CCCcccHHhh
Q psy8260 295 PEIMLNWM-HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSL--------------P------LLTKKDFRQV 353 (427)
Q Consensus 295 PEvl~~~~-~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~--------------~------~~~~~~~~~~ 353 (427)
||++.+.. +...+|+||+|++++.+.++..+|......+......... + ......+...
T Consensus 202 PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (335)
T PTZ00024 202 PELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTI 281 (335)
T ss_pred ChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHh
Confidence 99886543 4556799999999987755444432211111111110000 0 0111223344
Q ss_pred cCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q psy8260 354 FKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDPN 395 (427)
Q Consensus 354 ~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~ 395 (427)
+...++++.+||.+||+.||++|+|++|+|.||||.....+.
T Consensus 282 ~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~ 323 (335)
T PTZ00024 282 FPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPC 323 (335)
T ss_pred CcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCC
Confidence 556788999999999999999999999999999998765543
No 231
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=7.9e-36 Score=284.91 Aligned_cols=250 Identities=21% Similarity=0.309 Sum_probs=179.2
Q ss_pred ccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHH-HHHHHHHHH---HHhcCCCCCceeeeeeeecCccccCCceEE
Q psy8260 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVH-AKRTYRELR---MLKHMNHENVIGLLDVFHSNTCLADFKNVY 146 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~-~~~~~~Ei~---~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 146 (427)
.||+|+||.||. +.+..+|+.||+|.+.+....... .....+|.. ++...+||||+.+++.+... ...+
T Consensus 1 ~lg~G~~g~Vy~-~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~ 73 (279)
T cd05633 1 IIGRGGFGEVYG-CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP------DKLC 73 (279)
T ss_pred CcccCCCeEEEE-EEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC------CeEE
Confidence 479999999996 456678999999988654322121 222334443 34445899999999888653 3467
Q ss_pred EEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccc
Q psy8260 147 MVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224 (427)
Q Consensus 147 lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 224 (427)
+++|++ +++|..++.. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 74 lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~- 152 (279)
T cd05633 74 FILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (279)
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc-
Confidence 888877 7899887754 5699999999999999999999999999999999999999999999999998863321100
Q ss_pred ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-ccC
Q psy8260 225 YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN-WMH 303 (427)
Q Consensus 225 ~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~-~~~ 303 (427)
....||+.|+|||++.. ..+
T Consensus 153 -----------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~ 173 (279)
T cd05633 153 -----------------------------------------------------------HASVGTHGYMAPEVLQKGTAY 173 (279)
T ss_pred -----------------------------------------------------------cCcCCCcCccCHHHhcCCCCC
Confidence 01235667777776642 345
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-----C
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-----T 378 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-----t 378 (427)
..++|+||+|++++.+-++..+|........ .......... . .......++++.+||.+||+.||++|+ |
T Consensus 174 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~-~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 248 (279)
T cd05633 174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTV-N---VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRG 248 (279)
T ss_pred CchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhcC-C---cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCC
Confidence 6678999999999888666666543221111 1110000000 0 112345688999999999999999999 6
Q ss_pred HHHHhcCCCCCCCC
Q psy8260 379 AEQALAHPYLSQYS 392 (427)
Q Consensus 379 a~e~L~Hp~f~~~~ 392 (427)
++|+++||||....
T Consensus 249 ~~~~~~h~~~~~~~ 262 (279)
T cd05633 249 AQEVKEHVFFKGID 262 (279)
T ss_pred HHHHHhCccccCCC
Confidence 99999999998753
No 232
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-35 Score=279.51 Aligned_cols=258 Identities=19% Similarity=0.307 Sum_probs=190.6
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC---CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ---SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
.|.+++.+|+|+||.||. +.+..+|..||||.+..... .......+.+|+++++.++||||+++++++....
T Consensus 3 ~~~~~~~l~~g~~g~v~~-~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 77 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYL-CYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM---- 77 (265)
T ss_pred cceEeeEEecCCceEEEE-EEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC----
Confidence 577889999999999996 45677899999998753221 2233456778999999999999999999875421
Q ss_pred CceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...++++++++ +++|.+++.. ..+++..+..++.|++.||.|||+++|+|+||||+||+++.++.+||+|||+++...
T Consensus 78 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 78 ERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred CceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 23577888887 6799988765 468999999999999999999999999999999999999999999999999887432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..... . .......|+..|+|||++.
T Consensus 158 ~~~~~---------~----------------------------------------------~~~~~~~~~~~y~aPE~~~ 182 (265)
T cd06652 158 TICLS---------G----------------------------------------------TGMKSVTGTPYWMSPEVIS 182 (265)
T ss_pred ccccc---------c----------------------------------------------cccccCCCCccccChhhhc
Confidence 11000 0 0011234677888888887
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
+......+|+||+|++++.+-++..+|............. ..+... ......+..+.++|++||. +|++|||+
T Consensus 183 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~i~~~l~-~p~~Rp~~ 255 (265)
T cd06652 183 GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA-TQPTNP-----VLPPHVSDHCRDFLKRIFV-EAKLRPSA 255 (265)
T ss_pred CCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh-cCCCCC-----CCchhhCHHHHHHHHHHhc-ChhhCCCH
Confidence 7667778899999999988866555543221111111111 111111 1123457789999999995 99999999
Q ss_pred HHHhcCCCCC
Q psy8260 380 EQALAHPYLS 389 (427)
Q Consensus 380 ~e~L~Hp~f~ 389 (427)
+|+++|||+.
T Consensus 256 ~~il~~~~~~ 265 (265)
T cd06652 256 DELLRHTFVH 265 (265)
T ss_pred HHHhcCcccC
Confidence 9999999984
No 233
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.2e-35 Score=279.74 Aligned_cols=255 Identities=23% Similarity=0.360 Sum_probs=187.5
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|++.+.+|.|+||.||.+ .+..+++.+|+|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 72 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKA-RDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLRR------ 72 (262)
T ss_pred ccceEEEEEecCCCceEEEEe-EecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEeC------
Confidence 356888899999999999964 4566788999999865422 2456678999999999999999999987643
Q ss_pred ceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..+|++++++ +++|..++.. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++....
T Consensus 73 ~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 73 DKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred CEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhh
Confidence 4578999988 5688887754 479999999999999999999999999999999999999999999999999886432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... ......++..|+|||++.
T Consensus 153 ~~~~----------------------------------------------------------~~~~~~~~~~y~~Pe~~~ 174 (262)
T cd06613 153 ATIA----------------------------------------------------------KRKSFIGTPYWMAPEVAA 174 (262)
T ss_pred hhhh----------------------------------------------------------ccccccCCccccCchhhc
Confidence 2110 001123455566666654
Q ss_pred hc---cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 300 NW---MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 300 ~~---~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
.. .+...+|+||+|++++.|.++..++................ ...... ......+.++.+||.+||+.||..|
T Consensus 175 ~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R 251 (262)
T cd06613 175 VERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSN--FPPPKL-KDKEKWSPVFHDFIKKCLTKDPKKR 251 (262)
T ss_pred ccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--CCCccc-cchhhhhHHHHHHHHHHcCCChhhC
Confidence 44 45567899999999988865555543322111111111110 000000 0112346789999999999999999
Q ss_pred CCHHHHhcCCC
Q psy8260 377 ITAEQALAHPY 387 (427)
Q Consensus 377 ~ta~e~L~Hp~ 387 (427)
||+.+++.|||
T Consensus 252 pt~~~il~~~~ 262 (262)
T cd06613 252 PTATKLLQHPF 262 (262)
T ss_pred CCHHHHhcCCC
Confidence 99999999998
No 234
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.3e-36 Score=282.87 Aligned_cols=256 Identities=25% Similarity=0.397 Sum_probs=191.3
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|++.+.||.|+||.||. +.+..+++.||+|.+..... .....++.+|+++++.++||||+++++.+... ..
T Consensus 2 ~~~~~~~ig~g~~~~v~~-~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~ 73 (265)
T cd06605 2 DLEYLGELGAGNSGVVSK-VLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNN------GD 73 (265)
T ss_pred cchHHHHhcCCCCeEEEE-EEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecC------CE
Confidence 466778999999999996 45667899999999876432 34456678999999999999999999887654 45
Q ss_pred EEEEeccCC-CCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 145 VYMVTHLMG-ADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 145 ~~lv~e~~g-~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.++++++++ ++|.+++.. ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++.+||+|||.+.....
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 74 ISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred EEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 788998884 899998864 568999999999999999999999 9999999999999999999999999998754321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... ....|+..|+|||++.+
T Consensus 154 ~~~------------------------------------------------------------~~~~~~~~y~~PE~~~~ 173 (265)
T cd06605 154 SLA------------------------------------------------------------KTFVGTSSYMAPERIQG 173 (265)
T ss_pred HHh------------------------------------------------------------hcccCChhccCHHHHcC
Confidence 100 00235666777777766
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcC-cHHHHHHHhcCCCCCcccHHhhcC-CCChhHHHHHHHhcCCCCCCCCC
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKIS-SDSARKYINSLPLLTKKDFRQVFK-GANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
..+...+|+|++|++++.+-++..++..... ................. .... ..++++++||.+||..||.+|||
T Consensus 174 ~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt 250 (265)
T cd06605 174 NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP---RLPSGKFSPDFQDFVNLCLIKDPRERPS 250 (265)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC---CCChhhcCHHHHHHHHHHcCCCchhCcC
Confidence 6677778999999998777655444432210 00111111100000000 0011 16788999999999999999999
Q ss_pred HHHHhcCCCCCCC
Q psy8260 379 AEQALAHPYLSQY 391 (427)
Q Consensus 379 a~e~L~Hp~f~~~ 391 (427)
+.|++.||||.++
T Consensus 251 ~~~ll~~~~~~~~ 263 (265)
T cd06605 251 YKELLEHPFIKKY 263 (265)
T ss_pred HHHHhhCchhhcc
Confidence 9999999999875
No 235
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=7.1e-36 Score=310.10 Aligned_cols=284 Identities=20% Similarity=0.266 Sum_probs=180.3
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcC----CcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVS----GVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~----g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
..+.|.+.+.||+|+||.||++. +..+ +..||||++...... +....| .++...+.++..+...|....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~-~~~~~~~~~~~vAvK~~~~~~~~----e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKAS-LVNKQSKKEGKYVLKKATEYGAV----EIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEE-EcCCccccCcEEEEEEecccchh----HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 45679999999999999999754 4456 889999987542211 111111 122223333433333222111
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhhCCC---------------------CHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRTQKL---------------------SDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~~~l---------------------~~~~~~~~~~qi~~aL~yLH~~~iiHrDLK 195 (427)
........+++++|+ +++|.+++....+ .+..+..++.|++.||.|||++||+|||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 112345678888888 5788888764322 133466789999999999999999999999
Q ss_pred CCCeEEcC-CCCEEEeeCCCCCCCCC----CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhh
Q psy8260 196 PSNIAVNE-DCELKILDFGLARPTEN----EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKI 270 (427)
Q Consensus 196 p~NILl~~-~~~~kl~DFGla~~~~~----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki 270 (427)
|+|||++. ++.+||+|||+|+.... .....++|+.|+|||.+.......
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~-------------------------- 336 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTP-------------------------- 336 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCC--------------------------
Confidence 99999985 58999999999985432 234568899999999865321100
Q ss_pred hccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc---------HHHHHHHhc
Q psy8260 271 LDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS---------DSARKYINS 341 (427)
Q Consensus 271 ~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~---------~~~~~~~~~ 341 (427)
.....++..+++|++... .+..+.|+||+|+++++|.+++.+....... .....+...
T Consensus 337 ------------~~~~~~~~~~~sp~l~~~-~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 403 (566)
T PLN03225 337 ------------SAPSAPVATALSPVLWQL-NLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKL 403 (566)
T ss_pred ------------CCccccccccccchhccc-cCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHh
Confidence 001122334566765433 3566789999999999988766533211100 000011111
Q ss_pred CCCCCcccHH---hhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 342 LPLLTKKDFR---QVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 342 ~~~~~~~~~~---~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
.+........ +.+...+..+.|||.+||++||.+|||++|+|+||||.+.
T Consensus 404 ~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~ 456 (566)
T PLN03225 404 VEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDRE 456 (566)
T ss_pred hccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCC
Confidence 1100111111 1122234456799999999999999999999999999864
No 236
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.8e-36 Score=290.82 Aligned_cols=267 Identities=20% Similarity=0.277 Sum_probs=185.5
Q ss_pred eccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 68 ~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+++.+|.|+++.|+. +..+|+.||||++............+.+|+++++.++||||++++++|... ...|+
T Consensus 6 i~~~~~~~~~v~~~~---~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~------~~~~~ 76 (314)
T cd08216 6 IGKCFEDLMIVHLAK---HKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD------SELYV 76 (314)
T ss_pred hhHhhcCCceEEEEE---ecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC------CeEEE
Confidence 445555565555543 445899999999876544455667788999999999999999999988653 45788
Q ss_pred EeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 148 VTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
+++++ +++|.+++.. ..+++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||.+........
T Consensus 77 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~ 156 (314)
T cd08216 77 VSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK 156 (314)
T ss_pred EEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccc
Confidence 88887 5789888864 3589999999999999999999999999999999999999999999999998764321100
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc--
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-- 301 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-- 301 (427)
. .... ........++..|+|||++...
T Consensus 157 ~--------~~~~-------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~ 185 (314)
T cd08216 157 R--------QRVV-------------------------------------------HDFPKSSVKNLPWLSPEVLQQNLQ 185 (314)
T ss_pred c--------cccc-------------------------------------------ccccccccccccccCHHHhcCCCC
Confidence 0 0000 0011123467788889888653
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh-cCCC-------------CC------------cccHHhhcC
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN-SLPL-------------LT------------KKDFRQVFK 355 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~-~~~~-------------~~------------~~~~~~~~~ 355 (427)
.+..++|+||+|++++.+.++..+|.............. ..+. .. .........
T Consensus 186 ~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (314)
T cd08216 186 GYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTR 265 (314)
T ss_pred CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhh
Confidence 355678999999999877555444432111100000000 0000 00 000000112
Q ss_pred CCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q psy8260 356 GANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 356 ~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
..++++.+||.+||++||++|||++|+|+||||.+...+
T Consensus 266 ~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~ 304 (314)
T cd08216 266 TFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRR 304 (314)
T ss_pred HHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhccc
Confidence 235788999999999999999999999999999987644
No 237
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.6e-36 Score=292.59 Aligned_cols=265 Identities=20% Similarity=0.306 Sum_probs=184.3
Q ss_pred ccCcc--cccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEE
Q psy8260 71 TLSKE--SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 71 ~lg~g--~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv 148 (427)
.||+| +|+.||. +.+..+|+.||||.+..........+.+.+|+.+++.++||||++++++|... ...+++
T Consensus 5 ~ig~g~~~~~~v~~-a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~------~~~~~v 77 (328)
T cd08226 5 EIGRGFCNLTSVYL-ARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG------SWLWVI 77 (328)
T ss_pred HhCCcccCceeEEE-EEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC------CceEEE
Confidence 45555 8888986 56778999999999876544555556778999999999999999999998754 356888
Q ss_pred eccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccc
Q psy8260 149 THLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224 (427)
Q Consensus 149 ~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 224 (427)
++++ ++++.+++.. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+|++|||.+.........
T Consensus 78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 8887 6788888764 35899999999999999999999999999999999999999999999999854321110000
Q ss_pred ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc--c
Q psy8260 225 YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW--M 302 (427)
Q Consensus 225 ~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~--~ 302 (427)
.+..+..| ....++..|+|||++.+. .
T Consensus 158 --~~~~~~~~-------------------------------------------------~~~~~~~~y~aPE~~~~~~~~ 186 (328)
T cd08226 158 --AKVVYDFP-------------------------------------------------QFSTSVLPWLSPELLRQDLYG 186 (328)
T ss_pred --cccccccc-------------------------------------------------ccccCccCccChhhhcCCCCC
Confidence 00000000 011245568899988653 2
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCC------------------------------------
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLT------------------------------------ 346 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 346 (427)
+...+|+||+|++++.+.++..+|................+..+
T Consensus 187 ~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (328)
T cd08226 187 YNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQT 266 (328)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccc
Confidence 45678999999999877554444432211111111110000000
Q ss_pred --cccH-HhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q psy8260 347 --KKDF-RQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQYSD 393 (427)
Q Consensus 347 --~~~~-~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 393 (427)
...+ .......+++++|||++||++||++|||++|+|+||||.+...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 267 MTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred cccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence 0000 0011234678999999999999999999999999999986543
No 238
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.4e-36 Score=285.11 Aligned_cols=243 Identities=15% Similarity=0.146 Sum_probs=179.9
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH-HHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV-HAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv 148 (427)
..+|+|+++.||++.. +|+.||||++........ ..+.+.+|+.+|++++|||||++++++... ......++++
T Consensus 26 ~~i~~g~~~~v~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~--~~~~~~~~lv 100 (283)
T PHA02988 26 VLIKENDQNSIYKGIF---NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI--VDDLPRLSLI 100 (283)
T ss_pred eEEeeCCceEEEEEEE---CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec--ccCCCceEEE
Confidence 5689999999998765 688999999876433322 235677999999999999999999987541 0122457889
Q ss_pred eccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 149 THLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 149 ~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~-~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+|++ +++|.++++. +.+++.....++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.........
T Consensus 101 ~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~ 180 (283)
T PHA02988 101 LEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKN 180 (283)
T ss_pred EEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccc
Confidence 9888 6899998865 4688999999999999999999984 99999999999999999999999999987543222222
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh--ccC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN--WMH 303 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~--~~~ 303 (427)
. ||+.|+|||++.+ ..+
T Consensus 181 ~-------------------------------------------------------------~~~~y~aPE~~~~~~~~~ 199 (283)
T PHA02988 181 V-------------------------------------------------------------NFMVYFSYKMLNDIFSEY 199 (283)
T ss_pred c-------------------------------------------------------------CcccccCHHHhhhccccc
Confidence 3 4445555555543 346
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHh
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQAL 383 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L 383 (427)
..++|+||+|++++.+-++..||......+............. .....++++++||.+||+.||.+|||++|++
T Consensus 200 ~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell 273 (283)
T PHA02988 200 TIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK------LPLDCPLEIKCIVEACTSHDSIKRPNIKEIL 273 (283)
T ss_pred cchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 6678999999999988666555543322222222211111111 1124578899999999999999999999998
Q ss_pred c
Q psy8260 384 A 384 (427)
Q Consensus 384 ~ 384 (427)
+
T Consensus 274 ~ 274 (283)
T PHA02988 274 Y 274 (283)
T ss_pred H
Confidence 5
No 239
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.9e-35 Score=282.11 Aligned_cols=263 Identities=20% Similarity=0.300 Sum_probs=190.0
Q ss_pred ccccCcceeeccccCcccccEEEEeEEe----CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALD----SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFH 134 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~----~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~ 134 (427)
|++...+|.+.+.||+|+||.||.+... ...+..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 3566788999999999999999976432 1345689999886432 2333445778999999999999999999875
Q ss_pred cCccccCCceEEEEeccC-CCCHHHHHhhC-----------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc
Q psy8260 135 SNTCLADFKNVYMVTHLM-GADLNNILRTQ-----------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202 (427)
Q Consensus 135 ~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~-----------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~ 202 (427)
.. ...|+++|++ +++|.++++.. .++...+..++.|++.||.|||+++|+||||||+|||++
T Consensus 80 ~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~ 153 (288)
T cd05061 80 KG------QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA 153 (288)
T ss_pred CC------CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc
Confidence 43 3468888887 78999988631 235667888999999999999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccc
Q psy8260 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE 282 (427)
Q Consensus 203 ~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~ 282 (427)
.++.+||+|||+++......... .
T Consensus 154 ~~~~~~L~Dfg~~~~~~~~~~~~--------------------------------------------------------~ 177 (288)
T cd05061 154 HDFTVKIGDFGMTRDIYETDYYR--------------------------------------------------------K 177 (288)
T ss_pred CCCcEEECcCCcccccccccccc--------------------------------------------------------c
Confidence 99999999999987432110000 0
Q ss_pred cccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhH
Q psy8260 283 MTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQA 361 (427)
Q Consensus 283 ~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 361 (427)
.....++..|+|||.+.+..+..++|+||+|++++.+.+ +..+|.. .......+........ ......++.+
T Consensus 178 ~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~ 250 (288)
T cd05061 178 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG-LSNEQVLKFVMDGGYL------DQPDNCPERV 250 (288)
T ss_pred cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCC------CCCCCCCHHH
Confidence 001124556888888776667778899999999987643 2223322 1112222222111111 1112346789
Q ss_pred HHHHHHhcCCCCCCCCCHHHHhc------CCCCCCC
Q psy8260 362 IDLLSLMLELDSEKRITAEQALA------HPYLSQY 391 (427)
Q Consensus 362 ~dLi~~mL~~dP~~R~ta~e~L~------Hp~f~~~ 391 (427)
.++|.+||+.||++|||+.|+++ ||||...
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 251 TDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 99999999999999999999987 9999764
No 240
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.4e-35 Score=279.32 Aligned_cols=251 Identities=24% Similarity=0.358 Sum_probs=181.4
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
+.....||+|+||.||.+ .+..+++.||+|.+... .....+.+.+|+.+++.++|+||+++++++... ...
T Consensus 10 ~~~~~~lg~g~~g~v~~~-~~~~~~~~v~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~ 80 (268)
T cd06624 10 NGERVVLGKGTYGIVYAA-RDLSTQVRIAIKEIPER--DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN------GFF 80 (268)
T ss_pred CCceEEEecCCceEEEEe-EecCCCcEEEEEEecCC--CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC------CEE
Confidence 334457999999999965 45668899999988643 233455678999999999999999999987654 457
Q ss_pred EEEeccC-CCCHHHHHhh--CCC--CHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-CCCEEEeeCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRT--QKL--SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFGLARPTE 219 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~--~~l--~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-~~~~kl~DFGla~~~~ 219 (427)
+++++++ +++|.+++.. ..+ ++..+..++.|++.||.|||++||+||||||+||+++. ++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 8888877 7899998864 345 78888899999999999999999999999999999986 6799999999886432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... ......|++.|+|||++.
T Consensus 161 ~~~~----------------------------------------------------------~~~~~~~~~~~~aPE~~~ 182 (268)
T cd06624 161 GINP----------------------------------------------------------CTETFTGTLQYMAPEVID 182 (268)
T ss_pred cCCC----------------------------------------------------------ccccCCCCccccChhhhc
Confidence 1100 000112455666666654
Q ss_pred hcc--CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 300 NWM--HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 300 ~~~--~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
... +..++|+||+|++++.+.++..++...... ....+..... .....+....++++++||.+||+.||.+||
T Consensus 183 ~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 257 (268)
T cd06624 183 KGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP-QAAMFKVGMF----KIHPEIPESLSAEAKNFILRCFEPDPDKRA 257 (268)
T ss_pred cccccCCchhhhHHHHHHHHHHHhCCCCCccccCh-hhhHhhhhhh----ccCCCCCcccCHHHHHHHHHHcCCCchhCC
Confidence 322 456779999999998886555444321111 1111100000 000112234678999999999999999999
Q ss_pred CHHHHhcCCCC
Q psy8260 378 TAEQALAHPYL 388 (427)
Q Consensus 378 ta~e~L~Hp~f 388 (427)
|+.|++.||||
T Consensus 258 t~~~ll~~~~~ 268 (268)
T cd06624 258 SAHDLLQDPFL 268 (268)
T ss_pred CHHHHHhCCCC
Confidence 99999999997
No 241
>KOG0197|consensus
Probab=100.00 E-value=3.5e-36 Score=294.03 Aligned_cols=251 Identities=26% Similarity=0.328 Sum_probs=187.7
Q ss_pred ccccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecC
Q psy8260 57 PYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSN 136 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~ 136 (427)
.-+++.+..+.+.+.||+|.||.|+.+.++.. .+||+|.++.... ....+.+|+++|++|+|+|||+|+++...+
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~--~~vavk~ik~~~m---~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGS--TKVAVKTIKEGSM---SPEAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcCC--CcccceEEecccc---ChhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 34577777788889999999999999988643 4799998875433 235577999999999999999999997643
Q ss_pred ccccCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeC
Q psy8260 137 TCLADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DF 212 (427)
..+||||||+ .|+|.++|+. ..++......++.|||+||+||+++++|||||.++|||++++..+||+||
T Consensus 274 ------~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDF 347 (468)
T KOG0197|consen 274 ------EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDF 347 (468)
T ss_pred ------CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccc
Confidence 3689999998 6899999975 46899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCc-ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccc
Q psy8260 213 GLARPTENEM-TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291 (427)
Q Consensus 213 Gla~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~ 291 (427)
||||...++. +...|..+ -.-
T Consensus 348 GLAr~~~d~~Y~~~~~~kf----------------------------------------------------------PIk 369 (468)
T KOG0197|consen 348 GLARLIGDDEYTASEGGKF----------------------------------------------------------PIK 369 (468)
T ss_pred ccccccCCCceeecCCCCC----------------------------------------------------------Cce
Confidence 9999543321 11111110 134
Q ss_pred ccchHHhhhccCCCCCCHHHHHHHHHHhCCC-CHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcC
Q psy8260 292 YRAPEIMLNWMHYNQTDIHQLNLIMEMLGTP-PAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLE 370 (427)
Q Consensus 292 Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~ 370 (427)
|.|||.+....+..++|+||+|+.++++.+- ..|+. .......-..+..--.++ .....+++..+++..|-.
T Consensus 370 WtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~-~msn~ev~~~le~GyRlp------~P~~CP~~vY~lM~~CW~ 442 (468)
T KOG0197|consen 370 WTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP-GMSNEEVLELLERGYRLP------RPEGCPDEVYELMKSCWH 442 (468)
T ss_pred ecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC-CCCHHHHHHHHhccCcCC------CCCCCCHHHHHHHHHHhh
Confidence 6677777777788899999999998776432 22211 111111111221111111 123457788999999999
Q ss_pred CCCCCCCCHHHHh
Q psy8260 371 LDSEKRITAEQAL 383 (427)
Q Consensus 371 ~dP~~R~ta~e~L 383 (427)
.+|++|||.+.+.
T Consensus 443 ~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 443 EDPEDRPTFETLR 455 (468)
T ss_pred CCcccCCCHHHHH
Confidence 9999999988654
No 242
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.1e-36 Score=285.61 Aligned_cols=261 Identities=20% Similarity=0.250 Sum_probs=192.3
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|++.+.||+|+||.||.+ .+..+|+.||+|++.... .....+.+.+|+++++.++||||+++++.+...
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~-~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------ 75 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKV-KHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE------ 75 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEE-EEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC------
Confidence 456788899999999999964 556789999999876432 233456678999999999999999999988654
Q ss_pred ceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..+++++|++ +++|..++.. +.+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++....
T Consensus 76 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~ 155 (284)
T cd06620 76 NNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI 155 (284)
T ss_pred CEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence 4678999888 6789888765 468999999999999999999997 689999999999999999999999999875321
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... ....||..|+|||++.
T Consensus 156 ~~~~------------------------------------------------------------~~~~~~~~~~aPE~~~ 175 (284)
T cd06620 156 NSIA------------------------------------------------------------DTFVGTSTYMSPERIQ 175 (284)
T ss_pred hhcc------------------------------------------------------------CccccCcccCCHHHHc
Confidence 1100 0123566777777776
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-------HHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS-------DSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
+..+..++|+||+|++++.+.++..+|...... .................+. ....+.++.+||.+||+.|
T Consensus 176 ~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~d 253 (284)
T cd06620 176 GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP--SSDFPEDLRDFVDACLLKD 253 (284)
T ss_pred cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC--chhcCHHHHHHHHHHhcCC
Confidence 666677889999999998775555555322211 0000111110000000000 0124678999999999999
Q ss_pred CCCCCCHHHHhcCCCCCCCCC
Q psy8260 373 SEKRITAEQALAHPYLSQYSD 393 (427)
Q Consensus 373 P~~R~ta~e~L~Hp~f~~~~~ 393 (427)
|.+|||++|+++||||.+...
T Consensus 254 p~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 254 PTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred cccCcCHHHHhcCcccccccc
Confidence 999999999999999976443
No 243
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=9.3e-36 Score=283.77 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=193.2
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|...+.||.|+||.||.+ .+..++..||||.+.... .......+.+|+.++++++||||+++++++... ..
T Consensus 5 ~y~~~~~lg~g~~~~vy~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~ 76 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG------TK 76 (277)
T ss_pred hhhhhhhcccCCCeEEEEE-EEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC------CE
Confidence 4566788999999999965 556678999999886432 234456678999999999999999999998654 45
Q ss_pred EEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 145 VYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
.|+++|++ +++|.++++.+.+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++........
T Consensus 77 ~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 77 LWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 78999888 67999988888899999999999999999999999999999999999999999999999998864322100
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
......++..|+|||++.+...
T Consensus 157 ----------------------------------------------------------~~~~~~~~~~y~apE~~~~~~~ 178 (277)
T cd06640 157 ----------------------------------------------------------KRNTFVGTPFWMAPEVIQQSAY 178 (277)
T ss_pred ----------------------------------------------------------ccccccCcccccCHhHhccCCC
Confidence 0011235667778887766666
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHh
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQAL 383 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L 383 (427)
..++|+||+|++++.+.++..++.......... .. .... ........+.++.+||.+||+.||++|||+++++
T Consensus 179 ~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-~~---~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06640 179 DSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-LI---PKNN---PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELL 251 (277)
T ss_pred ccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-hh---hcCC---CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHH
Confidence 677899999999988866655553322111111 00 0000 0111223567889999999999999999999999
Q ss_pred cCCCCCCC
Q psy8260 384 AHPYLSQY 391 (427)
Q Consensus 384 ~Hp~f~~~ 391 (427)
+||||.+.
T Consensus 252 ~~~~~~~~ 259 (277)
T cd06640 252 KHKFIVKN 259 (277)
T ss_pred hChHhhhc
Confidence 99999754
No 244
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.6e-36 Score=285.78 Aligned_cols=254 Identities=20% Similarity=0.321 Sum_probs=192.3
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|...+.||.|+||.||.+ .+..+++.||+|.+.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~y~~~~~l~~g~~~~vy~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~ 76 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKG-IDNRTKEVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG------TK 76 (277)
T ss_pred HHHHHHHhcCCCCeeEEEE-EEcCCCeEEEEEEecccc-chHHHHHHHHHHHHHHcCCCCccHhhhcccccC------Cc
Confidence 4556678999999999965 456688999999886432 233445678999999999999999999987643 45
Q ss_pred EEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 145 VYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
.|+++|++ +++|.+++..+.+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++........
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 77 LWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred eEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 78999988 67899988888899999999999999999999999999999999999999999999999998864322100
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
......|+..|+|||++.+..+
T Consensus 157 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 178 (277)
T cd06642 157 ----------------------------------------------------------KRNTFVGTPFWMAPEVIKQSAY 178 (277)
T ss_pred ----------------------------------------------------------hhhcccCcccccCHHHhCcCCC
Confidence 0011235677888888776666
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHh
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQAL 383 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L 383 (427)
..++|+||+|++++.+.++..++.......... .. .... ........+.++.|||.+||+.||.+|||+.+++
T Consensus 179 ~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-~~---~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06642 179 DFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-LI---PKNS---PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELL 251 (277)
T ss_pred chhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-hh---hcCC---CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 778899999999988866555443221111110 10 0000 0011123567899999999999999999999999
Q ss_pred cCCCCCCC
Q psy8260 384 AHPYLSQY 391 (427)
Q Consensus 384 ~Hp~f~~~ 391 (427)
+||||..+
T Consensus 252 ~~~~~~~~ 259 (277)
T cd06642 252 KHKFITRY 259 (277)
T ss_pred HhHHHHHH
Confidence 99999764
No 245
>KOG0194|consensus
Probab=100.00 E-value=2.8e-36 Score=298.87 Aligned_cols=283 Identities=22% Similarity=0.296 Sum_probs=204.2
Q ss_pred hhhhhccccCCCCCCCc----cccccCCCccccccCcceeeccccCcccccEEEEeEEeCcCC---cEEEEEEccCc-CC
Q psy8260 32 SIVRLWTVYPASKLPSR----RLHDHFNQPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSG---VKVAIKKIARP-FQ 103 (427)
Q Consensus 32 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g---~~vAvK~i~~~-~~ 103 (427)
++..++..|.....+-. .+...+..+.|++.+.++.+++.||+|+||.||.|.+....+ ..||||..+.. ..
T Consensus 121 si~~li~~~~~~~~~~~~~~~~L~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~ 200 (474)
T KOG0194|consen 121 TISELVNYYKFSKLEITGKNFFLKRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSEL 200 (474)
T ss_pred cHHHHHHHHHhcccceeccceeecccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccc
Confidence 45555555554443331 255666777889999999999999999999999999877654 33899988753 34
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEeccC-CCCHHHHHhhCC--CCHHHHHHHHHHHHHH
Q psy8260 104 SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQK--LSDDHVQFLVYQILRG 180 (427)
Q Consensus 104 ~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~~--l~~~~~~~~~~qi~~a 180 (427)
.......+++|+++|++++|||||++||+.... ..+|++||++ ||+|.++|+..+ ++..+...++.+++.|
T Consensus 201 ~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~------~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~G 274 (474)
T KOG0194|consen 201 TKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE------EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARG 274 (474)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC------CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhH
Confidence 566778899999999999999999999987643 5689999998 789999998654 9999999999999999
Q ss_pred HHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccc
Q psy8260 181 LKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNI 260 (427)
Q Consensus 181 L~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~ 260 (427)
|+|||++++|||||..+|+|++.++.+||+|||+++..........
T Consensus 275 l~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~---------------------------------- 320 (474)
T KOG0194|consen 275 LEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKF---------------------------------- 320 (474)
T ss_pred HHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccc----------------------------------
Confidence 9999999999999999999999999999999999875431100000
Q ss_pred cccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHH
Q psy8260 261 AVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYI 339 (427)
Q Consensus 261 ~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~ 339 (427)
..-.-..|+|||.+....+..++|+|++|+.+++.-. +..|+......+...+..
T Consensus 321 ------------------------~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~ 376 (474)
T KOG0194|consen 321 ------------------------LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV 376 (474)
T ss_pred ------------------------cccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH
Confidence 0001235677777776667788899999987754422 222332221112222221
Q ss_pred hcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 340 NSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
...-..+ .......+...++.+|...||++|+|+.++.+
T Consensus 377 ~~~~r~~------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 377 KNGYRMP------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred hcCccCC------CCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 2111111 01123456778899999999999999988753
No 246
>KOG0584|consensus
Probab=100.00 E-value=1.3e-36 Score=300.69 Aligned_cols=252 Identities=25% Similarity=0.388 Sum_probs=193.0
Q ss_pred eeccccCcccccEEEEeEEeCcCCcEEEEEEc--cCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKI--ARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 67 ~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i--~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.....||+|+|-+||+ ++|..+|..||.-.+ ..-.+++...+++..|+.+|+.|+|||||++|+.|.+... ..
T Consensus 43 k~~evLGrGafKtVYk-a~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n----~~ 117 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYK-AFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN----KT 117 (632)
T ss_pred ehhhhcccccceeeee-ccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC----ce
Confidence 4557899999999995 788999999995433 2333456667889999999999999999999999876432 45
Q ss_pred EEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCCeEEcC-CCCEEEeeCCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNE-DCELKILDFGLARPTE 219 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~--iiHrDLKp~NILl~~-~~~~kl~DFGla~~~~ 219 (427)
+.+++|++ .|+|..++++ ++++...++.|++||++||.|||++. |||||||.+||+|+. .|.|||+|+|||....
T Consensus 118 in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred eeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 77788877 8999998865 67999999999999999999999884 999999999999975 5899999999997543
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
... ....+|||.|||||+..
T Consensus 198 ~s~------------------------------------------------------------aksvIGTPEFMAPEmYE 217 (632)
T KOG0584|consen 198 KSH------------------------------------------------------------AKSVIGTPEFMAPEMYE 217 (632)
T ss_pred ccc------------------------------------------------------------cceeccCccccChHHHh
Confidence 321 11235666666666655
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcC-cHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKIS-SDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
..|...+|+||+|+.+-+|.|...|+..-.. ....++. .....+..+. +--+|++++||.+||.. .+.|+|
T Consensus 218 -E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV---~SGiKP~sl~---kV~dPevr~fIekCl~~-~~~R~s 289 (632)
T KOG0584|consen 218 -ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV---TSGIKPAALS---KVKDPEVREFIEKCLAT-KSERLS 289 (632)
T ss_pred -hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH---HcCCCHHHhh---ccCCHHHHHHHHHHhcC-chhccC
Confidence 4477778999999988888887777654321 1222222 2222222222 33489999999999998 899999
Q ss_pred HHHHhcCCCCCCC
Q psy8260 379 AEQALAHPYLSQY 391 (427)
Q Consensus 379 a~e~L~Hp~f~~~ 391 (427)
|.|+|+||||..-
T Consensus 290 a~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 290 AKELLKDPFFDED 302 (632)
T ss_pred HHHHhhChhhccc
Confidence 9999999999863
No 247
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.1e-35 Score=281.88 Aligned_cols=252 Identities=21% Similarity=0.266 Sum_probs=187.0
Q ss_pred cCcceeeccccCcccccEEEEeEE----eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSAL----DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~----~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
.+..|.+.+.+|.|+||.||.+.. +..++..||+|.+... .......+.+|+.++++++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 79 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEG- 79 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-
Confidence 456788999999999999997653 2345677999988643 233455678999999999999999999987643
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhhC--------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRTQ--------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~~--------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~ 202 (427)
...+++++++ +++|.+++... .+++..+..++.|++.||+|||++|++||||||+|||++
T Consensus 80 -----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~ 154 (288)
T cd05093 80 -----DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG 154 (288)
T ss_pred -----CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc
Confidence 3568888887 68999888642 389999999999999999999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccc
Q psy8260 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE 282 (427)
Q Consensus 203 ~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~ 282 (427)
.++.+||+|||+++......... .
T Consensus 155 ~~~~~kl~dfg~~~~~~~~~~~~--------------------------------------------------------~ 178 (288)
T cd05093 155 ENLLVKIGDFGMSRDVYSTDYYR--------------------------------------------------------V 178 (288)
T ss_pred cCCcEEeccCCccccccCCceee--------------------------------------------------------c
Confidence 99999999999986432211000 0
Q ss_pred cccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhH
Q psy8260 283 MTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQA 361 (427)
Q Consensus 283 ~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 361 (427)
.....+++.|+|||++.+..+..++|+||+|++++.|.+ +..+|................. .......++++
T Consensus 179 ~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l 251 (288)
T cd05093 179 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV-------LQRPRTCPKEV 251 (288)
T ss_pred CCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHH
Confidence 011235677888888887777778999999999987754 4444432211111222211111 01123467899
Q ss_pred HHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 362 IDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 362 ~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
.+||.+||+.||.+|||++|+++
T Consensus 252 ~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 252 YDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999999999999854
No 248
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.6e-35 Score=281.61 Aligned_cols=257 Identities=21% Similarity=0.321 Sum_probs=186.5
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcccc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~ 140 (427)
..+.|.+...||.|+||.||.+ .+..+++.||+|.+.... .....+.+|+.+++++ +||||+++++++..... .
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~-~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~-~ 94 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKV-TNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK-L 94 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEE-EECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc-c
Confidence 3567899999999999999964 566789999999885432 1234566899999988 89999999999864321 1
Q ss_pred CCceEEEEeccC-CCCHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGl 214 (427)
.....|++++++ +++|.++++ ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~ 174 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGV 174 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeeccc
Confidence 124578888887 679988764 24689999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccc
Q psy8260 215 ARPTENE---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291 (427)
Q Consensus 215 a~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~ 291 (427)
++..... .....| +..
T Consensus 175 ~~~~~~~~~~~~~~~~-------------------------------------------------------------~~~ 193 (291)
T cd06639 175 SAQLTSTRLRRNTSVG-------------------------------------------------------------TPF 193 (291)
T ss_pred chhcccccccccCccC-------------------------------------------------------------Ccc
Confidence 8753221 111233 444
Q ss_pred ccchHHhhhc-----cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHH
Q psy8260 292 YRAPEIMLNW-----MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLS 366 (427)
Q Consensus 292 Y~APEvl~~~-----~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~ 366 (427)
|+|||++... .+..++|+||+|++++.+.++..++................+. . . ......+.++.+||.
T Consensus 194 y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~~~~l~~li~ 268 (291)
T cd06639 194 WMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPP-T---L-LHPEKWCRSFNHFIS 268 (291)
T ss_pred ccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCC-C---C-CcccccCHHHHHHHH
Confidence 5555544322 1456789999999998886665555332211111111111110 0 0 011235678999999
Q ss_pred HhcCCCCCCCCCHHHHhcCCCCC
Q psy8260 367 LMLELDSEKRITAEQALAHPYLS 389 (427)
Q Consensus 367 ~mL~~dP~~R~ta~e~L~Hp~f~ 389 (427)
+||+.||.+|||+.|+++||||+
T Consensus 269 ~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 269 QCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHhhcChhhCcCHHHHhcCcccC
Confidence 99999999999999999999984
No 249
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.6e-35 Score=277.49 Aligned_cols=252 Identities=19% Similarity=0.294 Sum_probs=188.7
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
++....|.+.+.||.|+||.||.+. +..+++.||+|.+... ......+.+|+++++.++||||+++++++...
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~-~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 74 (263)
T cd05052 2 EMERTDITMKHKLGGGQYGEVYEGV-WKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--- 74 (263)
T ss_pred CCchHHeEEeeecCCcccceEEEEE-EecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcCC---
Confidence 4556678899999999999999754 5567899999988643 22345678999999999999999999987643
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
..++++++++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+|||+++++.+||+|||++
T Consensus 75 ---~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~ 151 (263)
T cd05052 75 ---PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 151 (263)
T ss_pred ---CCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccc
Confidence 3567888877 7899988754 34889999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+........ ......+++.|+||
T Consensus 152 ~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~aP 174 (263)
T cd05052 152 RLMTGDTYT---------------------------------------------------------AHAGAKFPIKWTAP 174 (263)
T ss_pred cccccceee---------------------------------------------------------ccCCCCCccccCCH
Confidence 653221100 00011235678888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+..+..++|+||+|++++.|-+ +..++......+.......... . ......++++.+||.+||+.||+
T Consensus 175 E~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~li~~cl~~~p~ 247 (263)
T cd05052 175 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---M----ERPEGCPPKVYELMRACWQWNPS 247 (263)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC---C----CCCCCCCHHHHHHHHHHccCCcc
Confidence 88877777778899999999988754 4444432221111111111110 0 11245678999999999999999
Q ss_pred CCCCHHHHhcC
Q psy8260 375 KRITAEQALAH 385 (427)
Q Consensus 375 ~R~ta~e~L~H 385 (427)
+|||+.|+++.
T Consensus 248 ~Rp~~~~l~~~ 258 (263)
T cd05052 248 DRPSFAEIHQA 258 (263)
T ss_pred cCCCHHHHHHH
Confidence 99999998753
No 250
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.6e-35 Score=281.13 Aligned_cols=253 Identities=19% Similarity=0.265 Sum_probs=186.8
Q ss_pred CcceeeccccCcccccEEEEeEEeC----cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDS----VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
..+|.+.+.||+|+||.||.+.... .+...||+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~-- 80 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE-- 80 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC--
Confidence 3568889999999999999765432 23468999988643 2334455678999999999999999999987543
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeE
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT-----------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIA 200 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~-----------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 200 (427)
...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+
T Consensus 81 ----~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil 156 (283)
T cd05048 81 ----QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCL 156 (283)
T ss_pred ----CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEE
Confidence 3567888887 6899888754 34788889999999999999999999999999999999
Q ss_pred EcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCc
Q psy8260 201 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTE 280 (427)
Q Consensus 201 l~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~ 280 (427)
++.++.+||+|||+++........
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~-------------------------------------------------------- 180 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYY-------------------------------------------------------- 180 (283)
T ss_pred EcCCCcEEECCCcceeeccccccc--------------------------------------------------------
Confidence 999999999999998643211000
Q ss_pred cccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 281 NEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 281 ~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
.......+++.|+|||++.+..+..++|+||+|++++.|-+ +..+|......+.... +...... ......++
T Consensus 181 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~-i~~~~~~------~~~~~~~~ 253 (283)
T cd05048 181 RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM-IRSRQLL------PCPEDCPA 253 (283)
T ss_pred cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHcCCcC------CCcccCCH
Confidence 00112245677888888777677778899999999988743 4444433222222211 1111110 11234678
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
++.+|+.+||+.||.+|||+.|+++|
T Consensus 254 ~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 254 RVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999999999999875
No 251
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.5e-35 Score=279.66 Aligned_cols=256 Identities=20% Similarity=0.297 Sum_probs=185.9
Q ss_pred cccCcceeeccccCcccccEEEEeEEe----CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeec
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALD----SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~----~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 135 (427)
++..++|++.+.+|+|+||.||.+... ..++..||||++... ........+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 455677999999999999999976542 235678999988543 233345567899999999999999999998754
Q ss_pred CccccCCceEEEEeccC-CCCHHHHHhhC-----------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC
Q psy8260 136 NTCLADFKNVYMVTHLM-GADLNNILRTQ-----------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE 203 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~-g~~L~~~l~~~-----------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~ 203 (427)
. ...++++|++ +++|.++++.. .++...+..++.|++.||.|||++|++||||||+|||++.
T Consensus 81 ~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 81 G------QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 154 (277)
T ss_pred C------CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC
Confidence 3 3567888876 68999887542 2466788889999999999999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccc
Q psy8260 204 DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEM 283 (427)
Q Consensus 204 ~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~ 283 (427)
++.+||+|||+++......... ..
T Consensus 155 ~~~~~l~dfg~~~~~~~~~~~~--------------------------------------------------------~~ 178 (277)
T cd05062 155 DFTVKIGDFGMTRDIYETDYYR--------------------------------------------------------KG 178 (277)
T ss_pred CCCEEECCCCCccccCCcceee--------------------------------------------------------cC
Confidence 9999999999986432211000 00
Q ss_pred ccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHH
Q psy8260 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAI 362 (427)
Q Consensus 284 ~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 362 (427)
....+++.|+|||++.+..+...+|+||+|++++.+.+ +..+|... ......+....... .......++.+.
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~ 251 (277)
T cd05062 179 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM-SNEQVLRFVMEGGL------LDKPDNCPDMLF 251 (277)
T ss_pred CCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHcCCc------CCCCCCCCHHHH
Confidence 01134667888888877777778899999999987744 22233221 11111111111110 011234567899
Q ss_pred HHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 363 DLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 363 dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
+||.+||+.||++|||+.|++++
T Consensus 252 ~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 252 ELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999999999875
No 252
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.7e-35 Score=283.23 Aligned_cols=253 Identities=21% Similarity=0.423 Sum_probs=189.4
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEe
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~ 149 (427)
..||+|+||.||.+ ....+|..||||++... .......+.+|+.+++.++|+||+++++.|... ...++++
T Consensus 26 ~~lg~g~~g~v~~~-~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~ 96 (292)
T cd06657 26 IKIGEGSTGIVCIA-TVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG------DELWVVM 96 (292)
T ss_pred HHcCCCCCeEEEEE-EEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEeC------CEEEEEE
Confidence 57999999999965 45568999999987532 223345677999999999999999999988653 4678899
Q ss_pred ccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccccc
Q psy8260 150 HLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228 (427)
Q Consensus 150 e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt 228 (427)
|++ +++|.+++....+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++........
T Consensus 97 e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~----- 171 (292)
T cd06657 97 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----- 171 (292)
T ss_pred ecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc-----
Confidence 887 67898888777899999999999999999999999999999999999999999999999998753321100
Q ss_pred ccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCC
Q psy8260 229 RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD 308 (427)
Q Consensus 229 ~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d 308 (427)
......|++.|+|||.+....+..++|
T Consensus 172 -----------------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~D 198 (292)
T cd06657 172 -----------------------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVD 198 (292)
T ss_pred -----------------------------------------------------cccccccCccccCHHHhcCCCCCchhh
Confidence 001123566777777776555667789
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 309 IHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 309 ~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
+||+|++++.+.++..+|................+.. + .....+++++.++|.+||+.||.+|+|+.|+++||||
T Consensus 199 v~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~ 273 (292)
T cd06657 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK----L-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273 (292)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc----c-CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHH
Confidence 9999999987765544443221111111111111110 1 1123467889999999999999999999999999999
Q ss_pred CCCCCC
Q psy8260 389 SQYSDP 394 (427)
Q Consensus 389 ~~~~~~ 394 (427)
.+...|
T Consensus 274 ~~~~~~ 279 (292)
T cd06657 274 AKAGPP 279 (292)
T ss_pred hccCCC
Confidence 887544
No 253
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3e-35 Score=294.60 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=185.8
Q ss_pred ccccCcceeeccccCcccccEEEEeEEe----CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALD----SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVF 133 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~----~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~ 133 (427)
++..++.|.+++.||+|+||.||.+... ..++..||||++... ......+.+.+|+++|++++ |||||++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT-ARSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC-CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 3566788999999999999999976542 234567999998643 23344566889999999996 99999999998
Q ss_pred ecCccccCCceEEEEeccC-CCCHHHHHhh--------------------------------------------------
Q psy8260 134 HSNTCLADFKNVYMVTHLM-GADLNNILRT-------------------------------------------------- 162 (427)
Q Consensus 134 ~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~-------------------------------------------------- 162 (427)
... ..+|++||++ +++|.+++..
T Consensus 111 ~~~------~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (400)
T cd05105 111 TKS------GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQAD 184 (400)
T ss_pred ccC------CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccc
Confidence 643 4578999988 7898877642
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q psy8260 163 -----------------------------------------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195 (427)
Q Consensus 163 -----------------------------------------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLK 195 (427)
..+++..+..++.|++.||+|||+++|+|||||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dik 264 (400)
T cd05105 185 TTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLA 264 (400)
T ss_pred ccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence 136777888999999999999999999999999
Q ss_pred CCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCC
Q psy8260 196 PSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGL 275 (427)
Q Consensus 196 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~ 275 (427)
|+|||++.++.+||+|||+++........ .
T Consensus 265 p~Nill~~~~~~kL~DfGla~~~~~~~~~-------~------------------------------------------- 294 (400)
T cd05105 265 ARNVLLAQGKIVKICDFGLARDIMHDSNY-------V------------------------------------------- 294 (400)
T ss_pred hHhEEEeCCCEEEEEeCCcceeccccccc-------c-------------------------------------------
Confidence 99999999999999999998643211000 0
Q ss_pred CCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHh---CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHh
Q psy8260 276 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML---GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQ 352 (427)
Q Consensus 276 ~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (427)
......+++.|+|||++.+..+..++|+||+|++++.+ |..|.+ .................. .
T Consensus 295 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~--~~~~~~~~~~~~~~~~~~------~ 360 (400)
T cd05105 295 ------SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP--GMIVDSTFYNKIKSGYRM------A 360 (400)
T ss_pred ------ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCc--ccchhHHHHHHHhcCCCC------C
Confidence 00112356678888888777777888999999998765 444432 211111111111111000 0
Q ss_pred hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 353 VFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 353 ~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
.....++++.+||.+||+.||++|||+.++.+
T Consensus 361 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 361 KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 11345788999999999999999999998765
No 254
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.9e-35 Score=280.39 Aligned_cols=254 Identities=20% Similarity=0.323 Sum_probs=192.6
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|.+.+.||.|+||.||++ .+..++..||||.+.... .......+.+|+.+++.++||||+++++.+..+ ..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~-~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~ 76 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD------TK 76 (277)
T ss_pred hhhhheeEeecCCeEEEEE-EECCCCcEEEEEEecccc-chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC------Ce
Confidence 4667788999999999964 556678999999875432 233445677899999999999999999988653 45
Q ss_pred EEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 145 VYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
.|+++|++ +++|..++....+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 77 ~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 77 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 78999888 67899888878899999999999999999999999999999999999999999999999998764322100
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
......|+..|+|||.+.....
T Consensus 157 ----------------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~ 178 (277)
T cd06641 157 ----------------------------------------------------------KRNTFVGTPFWMAPEVIKQSAY 178 (277)
T ss_pred ----------------------------------------------------------hhccccCCccccChhhhccCCC
Confidence 0011235666777777766556
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHh
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQAL 383 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L 383 (427)
...+|+||+|++++.+.++..++.......... ..... . ........+.++.|+|.+||+.||.+||++.|++
T Consensus 179 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~---~---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l 251 (277)
T cd06641 179 DSKADIWSLGITAIELAKGEPPHSELHPMKVLF-LIPKN---N---PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 251 (277)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCCccchHHHHH-HHhcC---C---CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 667899999999988866665553221111111 11000 0 0111234578899999999999999999999999
Q ss_pred cCCCCCCC
Q psy8260 384 AHPYLSQY 391 (427)
Q Consensus 384 ~Hp~f~~~ 391 (427)
+||||.+.
T Consensus 252 ~~~~~~~~ 259 (277)
T cd06641 252 KHKFIVRF 259 (277)
T ss_pred hCHHHhhh
Confidence 99999864
No 255
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.5e-35 Score=282.63 Aligned_cols=261 Identities=32% Similarity=0.532 Sum_probs=186.6
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++.+.+|.|+||.||++ .+..+|+.||+|++............+.+|+++++.++|||++++++++.... ....
T Consensus 1 y~~~~~l~~g~~~~vy~~-~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~ 75 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKA-RNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG----KGSI 75 (287)
T ss_pred CeeeEEeccCCCeEEEEE-EECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC----CCcE
Confidence 456788999999999965 45667899999998765323334456778999999999999999999876431 2468
Q ss_pred EEEeccCCCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 146 YMVTHLMGADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 146 ~lv~e~~g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
++++++++++|..++... .+++..+..++.|++.||+|||++|++|+||||+||++++++.+||+|||++........
T Consensus 76 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 76 YMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred EEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 999999988998887654 689999999999999999999999999999999999999999999999999875432210
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-c
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-M 302 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-~ 302 (427)
. ......++..|+|||++.+. .
T Consensus 156 ~---------------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~ 178 (287)
T cd07840 156 A---------------------------------------------------------DYTNRVITLWYRPPELLLGATR 178 (287)
T ss_pred c---------------------------------------------------------cccccccccccCCceeeEcccc
Confidence 0 00112234455556544332 2
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCC----------------------CCCcccHHhhcCCC-Ch
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLP----------------------LLTKKDFRQVFKGA-NP 359 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~-s~ 359 (427)
+..++|+|++|++++.+.++..++................. ......+...+... ++
T Consensus 179 ~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (287)
T cd07840 179 YGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDP 258 (287)
T ss_pred CChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCH
Confidence 44567889999888777555444432211111111110000 00011122233343 88
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
++.++|.+||+.||.+|||++++++||||
T Consensus 259 ~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 259 SALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 99999999999999999999999999997
No 256
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.8e-35 Score=280.02 Aligned_cols=249 Identities=21% Similarity=0.321 Sum_probs=178.6
Q ss_pred ccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHH---HHHHhcCCCCCceeeeeeeecCccccCCceEE
Q psy8260 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRE---LRMLKHMNHENVIGLLDVFHSNTCLADFKNVY 146 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~E---i~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 146 (427)
.||+|+||.||. +.+..+|+.||+|.+.+..... ........| +..++..+||||++++++|... ...+
T Consensus 1 ~ig~g~~g~Vy~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~ 73 (278)
T cd05606 1 IIGRGGFGEVYG-CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP------DKLS 73 (278)
T ss_pred CcccCCCeEEEE-EEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC------CEEE
Confidence 479999999995 5566789999999886543221 111122233 4455567899999999888654 4578
Q ss_pred EEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccc
Q psy8260 147 MVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224 (427)
Q Consensus 147 lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 224 (427)
+++|++ |++|..++.. ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||+++.......
T Consensus 74 ~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~- 152 (278)
T cd05606 74 FILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (278)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC-
Confidence 888877 7889887754 4689999999999999999999999999999999999999999999999999864321100
Q ss_pred ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-cC
Q psy8260 225 YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-MH 303 (427)
Q Consensus 225 ~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-~~ 303 (427)
....|+..|+|||++.+. .+
T Consensus 153 -----------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~ 173 (278)
T cd05606 153 -----------------------------------------------------------HASVGTHGYMAPEVLQKGVAY 173 (278)
T ss_pred -----------------------------------------------------------cCcCCCcCCcCcHHhcCCCCC
Confidence 012356667777776532 35
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC-----C
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI-----T 378 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~-----t 378 (427)
...+|+||+|++++.+.++..+|......... ........ .. .......++++.|||.+||..||.+|+ |
T Consensus 174 ~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~-~~---~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~ 248 (278)
T cd05606 174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLT-MA---VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRG 248 (278)
T ss_pred CcccchHhHHHHHHHHHhCCCCCCCCCccchH-HHHHHhhc-cC---CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCC
Confidence 66789999999998876665555432111110 00000000 00 011234588999999999999999999 9
Q ss_pred HHHHhcCCCCCCC
Q psy8260 379 AEQALAHPYLSQY 391 (427)
Q Consensus 379 a~e~L~Hp~f~~~ 391 (427)
++++++||||...
T Consensus 249 ~~~ll~~~~~~~~ 261 (278)
T cd05606 249 AQEVKEHPFFRSL 261 (278)
T ss_pred HHHHHhCccccCC
Confidence 9999999999865
No 257
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5e-35 Score=279.65 Aligned_cols=257 Identities=20% Similarity=0.321 Sum_probs=185.1
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~ 139 (427)
....+|++.+.||+|+||.||+ +.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++++.... .
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~-~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~-~ 89 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFK-VLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD-V 89 (286)
T ss_pred CcccceeeeeeeccCCCcEEEE-EEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc-c
Confidence 3456788999999999999996 4566789999999875421 1224566899999998 7999999999874321 1
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 213 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFG 213 (427)
......|+++|++ +++|.+++.. ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg 169 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFG 169 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCC
Confidence 2234678899887 7889887642 458899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC---cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccc
Q psy8260 214 LARPTENE---MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR 290 (427)
Q Consensus 214 la~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~ 290 (427)
+++..... ..... |++
T Consensus 170 ~~~~~~~~~~~~~~~~-------------------------------------------------------------~~~ 188 (286)
T cd06638 170 VSAQLTSTRLRRNTSV-------------------------------------------------------------GTP 188 (286)
T ss_pred ceeecccCCCcccccc-------------------------------------------------------------CCC
Confidence 98643221 11123 444
Q ss_pred cccchHHhhh-----ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHH
Q psy8260 291 WYRAPEIMLN-----WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLL 365 (427)
Q Consensus 291 ~Y~APEvl~~-----~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi 365 (427)
.|+|||++.. ..+..++|+||+|++++.|.++..++..........+..... .... ......+.++.+||
T Consensus 189 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~li 263 (286)
T cd06638 189 FWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP----PPTL-HQPELWSNEFNDFI 263 (286)
T ss_pred cccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC----CCcc-cCCCCcCHHHHHHH
Confidence 5555555432 124556799999999998877665553321111111110000 0000 01122467899999
Q ss_pred HHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 366 SLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 366 ~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
.+||+.||.+|||++|+++||||
T Consensus 264 ~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 264 RKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HHHccCCcccCCCHHHHhhcccC
Confidence 99999999999999999999997
No 258
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.4e-35 Score=275.12 Aligned_cols=251 Identities=23% Similarity=0.362 Sum_probs=186.4
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC---CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ---SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
|..++.||.|+||.||.+ .+..++..||+|.+..... .....+.+.+|+.+++.++|+||+++++++...
T Consensus 2 ~~~~~~ig~g~~~~vy~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 74 (258)
T cd06632 2 WRKGELLGSGSFGSVYEG-LNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE------ 74 (258)
T ss_pred ccccceeeecCCceEEEE-EEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC------
Confidence 556788999999999965 4556889999998754321 233456678999999999999999999987543
Q ss_pred ceEEEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..+|+++|++ +++|.+++... .+++..+..++.|++.||.|||+.||+|+||||+||+++.++.+||+|||++.....
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 75 DNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred CeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 4578888888 67999888654 489999999999999999999999999999999999999999999999998764322
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... .....|++.|+|||.+..
T Consensus 155 ~~~-----------------------------------------------------------~~~~~~~~~y~~pe~~~~ 175 (258)
T cd06632 155 FSF-----------------------------------------------------------AKSFKGSPYWMAPEVIAQ 175 (258)
T ss_pred ccc-----------------------------------------------------------ccccCCCcceeCHHHhcC
Confidence 110 011235566666666654
Q ss_pred cc-CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 301 WM-HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 301 ~~-~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
.. +...+|+|++|++++.+-++..+|..........+..... ........+++++.+||.+||+.||.+|||+
T Consensus 176 ~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 249 (258)
T cd06632 176 QGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK------ELPPIPDHLSDEAKDFILKCLQRDPSLRPTA 249 (258)
T ss_pred CCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc------cCCCcCCCcCHHHHHHHHHHhhcCcccCcCH
Confidence 44 5567899999999877755544443221111111111100 0112234568899999999999999999999
Q ss_pred HHHhcCCCC
Q psy8260 380 EQALAHPYL 388 (427)
Q Consensus 380 ~e~L~Hp~f 388 (427)
+|++.|||+
T Consensus 250 ~~~l~~~~~ 258 (258)
T cd06632 250 AELLEHPFV 258 (258)
T ss_pred HHHhcCCCC
Confidence 999999996
No 259
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3.8e-35 Score=276.86 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=186.2
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEec
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e 150 (427)
||.|+||.||.+ .+..+++.||+|++.+.... ....+.+.+|+.+++.++||||+++++.+... ..+|++++
T Consensus 1 lg~g~~~~v~~~-~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e 73 (262)
T cd05572 1 LGVGGFGRVELV-KVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK------KYIYMLME 73 (262)
T ss_pred CCCCCceEEEEE-EECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC------CccEEEEe
Confidence 689999999965 45668999999998654332 23445678999999999999999999987654 35788888
Q ss_pred cC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccccc
Q psy8260 151 LM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228 (427)
Q Consensus 151 ~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt 228 (427)
++ +++|.+++.. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||+++.......
T Consensus 74 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~----- 148 (262)
T cd05572 74 YCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK----- 148 (262)
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc-----
Confidence 86 7899998865 4689999999999999999999999999999999999999999999999999875432110
Q ss_pred ccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCC
Q psy8260 229 RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD 308 (427)
Q Consensus 229 ~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d 308 (427)
.....|++.|+|||++.+..+..++|
T Consensus 149 ------------------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~D 174 (262)
T cd05572 149 ------------------------------------------------------TWTFCGTPEYVAPEIILNKGYDFSVD 174 (262)
T ss_pred ------------------------------------------------------cccccCCcCccChhHhcCCCCCChhh
Confidence 00113556677777766555667789
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcC--cHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC-----HHH
Q psy8260 309 IHQLNLIMEMLGTPPAEFMAKIS--SDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT-----AEQ 381 (427)
Q Consensus 309 ~~slg~i~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t-----a~e 381 (427)
+|++|++++.+.++..++..... .....+........ ......++++.+||.+||+.||.+|+| ++|
T Consensus 175 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~ 248 (262)
T cd05572 175 YWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL------EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKD 248 (262)
T ss_pred hhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC------CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHH
Confidence 99999999877555555543221 11111111100000 111234788999999999999999999 999
Q ss_pred HhcCCCCCCC
Q psy8260 382 ALAHPYLSQY 391 (427)
Q Consensus 382 ~L~Hp~f~~~ 391 (427)
+++||||.++
T Consensus 249 l~~~~~~~~~ 258 (262)
T cd05572 249 IKKHKWFNGF 258 (262)
T ss_pred HhcChhhhCC
Confidence 9999999875
No 260
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.1e-35 Score=283.05 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=188.5
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC-CCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF-QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
..|.+.+.||.|+||.||.+. +..+|+.||+|++.... ........+.+|+.+++.++||||+++++++...
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------ 87 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFAR-DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE------ 87 (307)
T ss_pred hhhhhheeecCCCCeEEEEEE-EcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC------
Confidence 457778899999999999654 55678999999886432 2333445678999999999999999999988653
Q ss_pred ceEEEEeccCCCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
...|++++++.+++.+++. ...+++..+..++.|++.||.|||++||+||||+|+||+++.++.+||+|||++.....
T Consensus 88 ~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 88 HTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred CeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 4578999999888877664 35689999999999999999999999999999999999999999999999998864322
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
. ....++..|+|||++.+. ..
T Consensus 168 ~-~~~~~~~~y~aPE~~~~~----------------------------------------------------------~~ 188 (307)
T cd06607 168 A-NSFVGTPYWMAPEVILAM----------------------------------------------------------DE 188 (307)
T ss_pred C-CCccCCccccCceeeecc----------------------------------------------------------CC
Confidence 1 223444455555543210 01
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc-CCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS-LPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
..+..++|+|++|++++.+.++..++............... .+... ....+.++++||.+||..||++|||+
T Consensus 189 ~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~ 261 (307)
T cd06607 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLS-------SNDWSDYFRNFVDSCLQKIPQDRPSS 261 (307)
T ss_pred CCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCC-------chhhCHHHHHHHHHHhcCChhhCcCH
Confidence 12445689999999998886665555332111111111111 11111 11246789999999999999999999
Q ss_pred HHHhcCCCCCCCC
Q psy8260 380 EQALAHPYLSQYS 392 (427)
Q Consensus 380 ~e~L~Hp~f~~~~ 392 (427)
.+++.||||....
T Consensus 262 ~~il~~~~~~~~~ 274 (307)
T cd06607 262 EELLKHRFVLRER 274 (307)
T ss_pred HHHhcChhhcccC
Confidence 9999999998643
No 261
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.8e-35 Score=276.53 Aligned_cols=251 Identities=26% Similarity=0.368 Sum_probs=187.0
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.+|.|+||.||.+ .+..+|..||+|.+............+.+|+++++.++|+||+++++.+... ...
T Consensus 2 ~~~~~~l~~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~------~~~ 74 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLA-KAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN------GRL 74 (257)
T ss_pred ceEEEEecCCCcceEEEE-EEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC------CeE
Confidence 677889999999999964 4566889999999865433333445677999999999999999999887543 457
Q ss_pred EEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC-CEEEeeCCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTEN 220 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~-~~kl~DFGla~~~~~ 220 (427)
++++|++ +++|.+++... .+++..+..++.|++.||.|||+++++|+||||+||+++.++ .+||+|||.+.....
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 75 FIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 8888888 77998887542 478999999999999999999999999999999999998875 569999998764322
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
... ......|++.|+|||++.+
T Consensus 155 ~~~----------------------------------------------------------~~~~~~~~~~~~ape~~~~ 176 (257)
T cd08225 155 SME----------------------------------------------------------LAYTCVGTPYYLSPEICQN 176 (257)
T ss_pred Ccc----------------------------------------------------------cccccCCCccccCHHHHcC
Confidence 110 0001236677888887766
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
..+...+|+|++|++++.+-++..++............... .+.......+.++.++|.+||+.||++|||++
T Consensus 177 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~ 249 (257)
T cd08225 177 RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG-------YFAPISPNFSRDLRSLISQLFKVSPRDRPSIT 249 (257)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-------cCCCCCCCCCHHHHHHHHHHhccChhhCcCHH
Confidence 66667789999999997775544444222111111111110 01112234678899999999999999999999
Q ss_pred HHhcCCCC
Q psy8260 381 QALAHPYL 388 (427)
Q Consensus 381 e~L~Hp~f 388 (427)
|+++||||
T Consensus 250 ~ll~~~~~ 257 (257)
T cd08225 250 SILKRPFL 257 (257)
T ss_pred HHhhCCCC
Confidence 99999997
No 262
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=8.8e-35 Score=272.42 Aligned_cols=251 Identities=24% Similarity=0.384 Sum_probs=192.0
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.+|.|+||.||.+. +..++..||+|++............+.+|+++++.++|||++++.+.+... ...
T Consensus 2 y~~~~~l~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~------~~~ 74 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVR-RKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK------GKL 74 (258)
T ss_pred ceEEeeeccCCCeEEEEEE-EcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC------CEE
Confidence 6677899999999999654 566899999999876554445566788999999999999999999987653 457
Q ss_pred EEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
+++++++ +++|...++. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 154 (258)
T cd08215 75 CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLS 154 (258)
T ss_pred EEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecc
Confidence 8888887 5789888764 568999999999999999999999999999999999999999999999999876432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... ......|++.|+|||.+.
T Consensus 155 ~~~~----------------------------------------------------------~~~~~~~~~~y~~pe~~~ 176 (258)
T cd08215 155 STVD----------------------------------------------------------LAKTVVGTPYYLSPELCQ 176 (258)
T ss_pred cCcc----------------------------------------------------------eecceeeeecccChhHhc
Confidence 2110 001124667788888777
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
+......+|+|++|++++.+.++..++................ ........+.++.++|.+||..||++|||+
T Consensus 177 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~ 249 (258)
T cd08215 177 NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-------YPPIPSQYSSELRNLVSSLLQKDPEERPSI 249 (258)
T ss_pred cCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 7667778899999999877755544443221111111111111 111122467889999999999999999999
Q ss_pred HHHhcCCCC
Q psy8260 380 EQALAHPYL 388 (427)
Q Consensus 380 ~e~L~Hp~f 388 (427)
.|+|+||||
T Consensus 250 ~~ll~~~~~ 258 (258)
T cd08215 250 AQILQSPFI 258 (258)
T ss_pred HHHhcCCCC
Confidence 999999997
No 263
>KOG0608|consensus
Probab=100.00 E-value=2.7e-36 Score=296.86 Aligned_cols=303 Identities=21% Similarity=0.293 Sum_probs=213.6
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
+.+.-|-..+.||-|+||.|...+ ...|...+|+|.+.+... ...+..-...|-.||..-+.+-||+||..|++.
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~-KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk--- 701 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVR-KVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK--- 701 (1034)
T ss_pred ccccceEEEeeecccccceeEEEe-ecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC---
Confidence 344556677899999999998644 445678899998875432 122233456788999999999999999888765
Q ss_pred cCCceEEEEeccC-CCCHHHHH-hhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNIL-RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l-~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.++|+||+|. |||+-.+| +.+-|.|+.+++|+.++.+|+++.|..|+|||||||+|||||.+|++||.||||+.-
T Consensus 702 ---dnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 702 ---DNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred ---CceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccccc
Confidence 4578999887 88988765 667899999999999999999999999999999999999999999999999999864
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCc-cccccccccccccchH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTE-NEMTGYVATRWYRAPE 296 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~-~~~~~~~gt~~Y~APE 296 (427)
+.-.. .+.+|- ...+. ....+...+.|+..- ..+|++.+.-.+... -.....+||+.|+|||
T Consensus 779 fRWTH----dskYYq------~gdH~--RqDSmep~~e~~d~~-----~~lkvL~~ra~~~h~r~~ahslvgt~nyiape 841 (1034)
T KOG0608|consen 779 FRWTH----DSKYYQ------EGDHH--RQDSMEPSPEWADIS-----KCLKVLERRAMRQHQRILAHSLVGTPNYIAPE 841 (1034)
T ss_pred ceecc----cccccc------CCCcc--ccccCCCchhhcccc-----ccchHHHHHHHhhhhhhhhhhhcCCCcccChH
Confidence 32111 011111 00111 111233334454321 114444443222111 1234678999999999
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
||....+..-+|||+.|+|+++|..+..+|.+....++..+.+++...+ .. ..-..+|+++.|||.++. .++++|
T Consensus 842 vl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l-~~---~~~~~ls~e~~~li~kLc-~sad~R 916 (1034)
T KOG0608|consen 842 VLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFL-HI---PYQGNLSKEALDLIQKLC-CSADSR 916 (1034)
T ss_pred HhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhcc-cc---ccccccCHHHHHHHHHHh-cChhhh
Confidence 9999989999999999999999988777787654433332222211000 00 011357999999999977 589999
Q ss_pred C---CHHHHhcCCCCCCCC
Q psy8260 377 I---TAEQALAHPYLSQYS 392 (427)
Q Consensus 377 ~---ta~e~L~Hp~f~~~~ 392 (427)
+ .++|+..||||+.+.
T Consensus 917 LGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 917 LGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred hcccchhhhhcCccccccc
Confidence 8 478899999998653
No 264
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.3e-35 Score=274.35 Aligned_cols=258 Identities=26% Similarity=0.389 Sum_probs=190.6
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.||.|+||.||.+ .+..+++.||+|.+............+.+|+.+++.++|+||+++++.+... ..+
T Consensus 2 y~~~~~lg~G~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~------~~~ 74 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTA-VNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR------EKV 74 (264)
T ss_pred ceeeeEeecCCCcEEEEE-EECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC------CEE
Confidence 667889999999999965 4556789999999876544444567788999999999999999999986543 457
Q ss_pred EEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 146 YMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
+++++++ +++|.+++... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 75 YIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred EEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 8888887 68999988654 488999999999999999999999999999999999999999999999999875432211
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc-
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM- 302 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~- 302 (427)
.. + .......+++.|+|||++.+..
T Consensus 155 ~~-~-----------------------------------------------------~~~~~~~~~~~~~~PE~~~~~~~ 180 (264)
T cd06626 155 TM-G-----------------------------------------------------EEVQSLAGTPAYMAPEVITGGKG 180 (264)
T ss_pred cc-c-----------------------------------------------------ccccCCcCCcCccChhhccCCCC
Confidence 00 0 0011234566777777776554
Q ss_pred --CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 303 --HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 303 --~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
...++|+|++|++++.+.++..+|........ ..+...... ...+ .....+++.+.+||.+||+.||.+|||++
T Consensus 181 ~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~--~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 256 (264)
T cd06626 181 KGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-IMFHVGAGH--KPPI-PDSLQLSPEGKDFLDRCLESDPKKRPTAS 256 (264)
T ss_pred CCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-HHHHHhcCC--CCCC-CcccccCHHHHHHHHHHccCCcccCCCHH
Confidence 56678999999999777555555532211111 111111100 0000 01123578899999999999999999999
Q ss_pred HHhcCCCC
Q psy8260 381 QALAHPYL 388 (427)
Q Consensus 381 e~L~Hp~f 388 (427)
|+++|||+
T Consensus 257 ~i~~~~~~ 264 (264)
T cd06626 257 ELLQHPFV 264 (264)
T ss_pred HHhcCCCC
Confidence 99999996
No 265
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.5e-35 Score=281.35 Aligned_cols=260 Identities=19% Similarity=0.214 Sum_probs=184.1
Q ss_pred cCcceeeccccCcccccEEEEeEEeC---------------cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDS---------------VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~---------------~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnI 126 (427)
..++|++.+.||+|+||.||.+.... ..+..||+|.+.... .......+.+|++++++++||||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCE
Confidence 34678899999999999999754322 123568999886542 33445667899999999999999
Q ss_pred eeeeeeeecCccccCCceEEEEeccC-CCCHHHHHhhC------------CCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q psy8260 127 IGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRD 193 (427)
Q Consensus 127 v~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrD 193 (427)
+++++++... ...+++++++ +++|.+++... .+++..+..++.|++.||.|||++||+|||
T Consensus 82 ~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~d 155 (296)
T cd05051 82 ARLLGVCTVD------PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRD 155 (296)
T ss_pred eEEEEEEecC------CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 9999987653 3567888876 68999888643 488999999999999999999999999999
Q ss_pred CCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhcc
Q psy8260 194 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDF 273 (427)
Q Consensus 194 LKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~ 273 (427)
|||+||+++.++.++|+|||+++........
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------- 186 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYY------------------------------------------------- 186 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcce-------------------------------------------------
Confidence 9999999999999999999988643221000
Q ss_pred CCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC--CCHHHHhhcCcHHHHHHHhcCCCCCcccHH
Q psy8260 274 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT--PPAEFMAKISSDSARKYINSLPLLTKKDFR 351 (427)
Q Consensus 274 g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (427)
.......+++.|+|||++.+..+..++|+||+|++++.+.+ +..++.........................
T Consensus 187 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (296)
T cd05051 187 -------RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYL 259 (296)
T ss_pred -------eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccC
Confidence 00012235667888888877667788899999999986632 333332211111111111100000000000
Q ss_pred hhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 352 QVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 352 ~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
......++++.+||.+||+.||.+|||+.|+++
T Consensus 260 ~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 260 PRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 111235678999999999999999999999965
No 266
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.1e-35 Score=278.04 Aligned_cols=252 Identities=18% Similarity=0.254 Sum_probs=186.0
Q ss_pred cceeeccccCcccccEEEEeEE---eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSAL---DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~---~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
..+++.+.||+|+||.||++.. +..+++.||+|.+.... .......+.+|+++++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE---- 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC----
Confidence 5678889999999999998764 33467899999986432 334445677899999999999999999987654
Q ss_pred CCceEEEEeccC-CCCHHHHHhh------------------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEE
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT------------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~------------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl 201 (427)
...|+++|++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus 80 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili 157 (283)
T cd05090 80 --QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI 157 (283)
T ss_pred --CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE
Confidence 3568888887 6799888742 236788889999999999999999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcc
Q psy8260 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTEN 281 (427)
Q Consensus 202 ~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~ 281 (427)
+.++.+||+|||+++.........
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~~~-------------------------------------------------------- 181 (283)
T cd05090 158 GEQLHVKISDLGLSREIYSADYYR-------------------------------------------------------- 181 (283)
T ss_pred cCCCcEEeccccccccccCCccee--------------------------------------------------------
Confidence 999999999999987542211000
Q ss_pred ccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChh
Q psy8260 282 EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQ 360 (427)
Q Consensus 282 ~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 360 (427)
......++..|+|||++.+..+...+|+||+|++++.|-+ +..+|.... .............. ......+++
T Consensus 182 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~ 254 (283)
T cd05090 182 VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS-NQEVIEMVRKRQLL------PCSEDCPPR 254 (283)
T ss_pred cccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcC------CCCCCCCHH
Confidence 0011234566888888776667778899999999987644 333332211 11111112111111 122346788
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 361 AIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 361 ~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
+.+||.+||+.||.+||++.+++++
T Consensus 255 ~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 255 MYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHHHHHcccCcccCcCHHHHHHH
Confidence 9999999999999999999999876
No 267
>KOG0193|consensus
Probab=100.00 E-value=4.1e-36 Score=295.61 Aligned_cols=258 Identities=24% Similarity=0.306 Sum_probs=194.6
Q ss_pred CccccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeec
Q psy8260 56 QPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135 (427)
Q Consensus 56 ~~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 135 (427)
..+|++..+.+.++..||.|+||+||++.++. .||||+++.......+.+.|.+|+.++++-+|.||+-+.+++..
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG----dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG----DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc----ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 35788888999999999999999999988865 69999998877778888999999999999999999999998764
Q ss_pred CccccCCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeC
Q psy8260 136 NTCLADFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DF 212 (427)
. .+.|+.-+| |.+|+.+++- .+|.....+.|++||++||.|||.++|||||||..||++.+++.|||+||
T Consensus 460 p-------~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 460 P-------PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred C-------ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecc
Confidence 3 246777777 6689988853 56889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
||+.... +|+.. .....-.|...|
T Consensus 533 GLatvk~---------~w~g~-----------------------------------------------~q~~qp~gsilw 556 (678)
T KOG0193|consen 533 GLATVKT---------RWSGE-----------------------------------------------QQLEQPHGSLLW 556 (678)
T ss_pred cceeeee---------eeccc-----------------------------------------------cccCCCccchhh
Confidence 9985321 11000 000111234445
Q ss_pred cchHHhhh---ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCC-CCcccHHhhcCCCChhHHHHHHHh
Q psy8260 293 RAPEIMLN---WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPL-LTKKDFRQVFKGANPQAIDLLSLM 368 (427)
Q Consensus 293 ~APEvl~~---~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~dLi~~m 368 (427)
|||||++- .+|...+|+|++|+++|+|.++..|+....... ++..... +...+.......-..+.++|+..|
T Consensus 557 mAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq----IifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C 632 (678)
T KOG0193|consen 557 MAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ----IIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDC 632 (678)
T ss_pred hcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh----eEEEecccccCccchhhhccCHHHHHHHHHHH
Confidence 55555542 246667899999999999988887776332221 1111111 111122222222334889999999
Q ss_pred cCCCCCCCCCHHHHhc
Q psy8260 369 LELDSEKRITAEQALA 384 (427)
Q Consensus 369 L~~dP~~R~ta~e~L~ 384 (427)
+.+||+.||+..++|.
T Consensus 633 ~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 633 WKFDREERPLFPQLLS 648 (678)
T ss_pred HhcCcccCccHHHHHH
Confidence 9999999999999886
No 268
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.9e-35 Score=278.33 Aligned_cols=243 Identities=20% Similarity=0.239 Sum_probs=177.3
Q ss_pred eeeccc--cCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhc-CCCCCceeeeeeeecCccccCC
Q psy8260 66 IDIGPT--LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKH-MNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 66 ~~~~~~--lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
+++.+. +|.|+||.||. +.+..++..+|+|.+....... .|+..... .+||||+++++.|...
T Consensus 16 ~~~~~~~~lg~g~~g~v~~-~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~------ 81 (267)
T PHA03390 16 CEIVKKLKLIDGKFGKVSV-LKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTL------ 81 (267)
T ss_pred hccccceeecCCCceEEEE-EEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecC------
Confidence 344444 59999999996 4567789999999886432211 12222221 2799999999998654
Q ss_pred ceEEEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC-CEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~-~~kl~DFGla~~~~ 219 (427)
..+|+++|++ +++|.++++.. .+++..+..++.|++.||.|||+.|++||||||+||+++.++ .++|+|||+++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 3578899887 78999988764 799999999999999999999999999999999999999888 99999999876432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
... ...|+..|+|||++.
T Consensus 162 ~~~--------------------------------------------------------------~~~~~~~y~aPE~~~ 179 (267)
T PHA03390 162 TPS--------------------------------------------------------------CYDGTLDYFSPEKIK 179 (267)
T ss_pred CCc--------------------------------------------------------------cCCCCCcccChhhhc
Confidence 110 112556677777776
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHH-HHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDS-ARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
+..+..++|+||+|++++.+.++..||........ ......... . .....+..++.+.+||.+||+.||.+|++
T Consensus 180 ~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~li~~~l~~~p~~R~~ 254 (267)
T PHA03390 180 GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ-K----KLPFIKNVSKNANDFVQSMLKYNINYRLT 254 (267)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc-c----cCCcccccCHHHHHHHHHHhccChhhCCc
Confidence 66667778999999999888665555532211111 111111110 0 01122357899999999999999999996
Q ss_pred -HHHHhcCCCCC
Q psy8260 379 -AEQALAHPYLS 389 (427)
Q Consensus 379 -a~e~L~Hp~f~ 389 (427)
.+|+|+||||.
T Consensus 255 ~~~~~l~h~~~~ 266 (267)
T PHA03390 255 NYNEIIKHPFLK 266 (267)
T ss_pred hHHHHhcCCccc
Confidence 59999999996
No 269
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6.1e-35 Score=278.02 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=187.4
Q ss_pred CcceeeccccCcccccEEEEeEEe----CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALD----SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~----~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
...|.+.+.||+|+||.||.+... ..+++.||||.+.... .......+.+|+++|+.++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEG-- 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC--
Confidence 456788899999999999976542 2456889999886542 233456778999999999999999999988654
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhC---------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQ---------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~---------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~ 202 (427)
...+++++++ +++|.++++.. .+++..+..++.|++.||.|||++|++||||||+||+++
T Consensus 81 ----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~ 156 (280)
T cd05049 81 ----DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG 156 (280)
T ss_pred ----CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc
Confidence 4578888877 78999888642 378888999999999999999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccc
Q psy8260 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE 282 (427)
Q Consensus 203 ~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~ 282 (427)
.++.+||+|||+++......... .
T Consensus 157 ~~~~~kl~d~g~~~~~~~~~~~~--------------------------------------------------------~ 180 (280)
T cd05049 157 YDLVVKIGDFGMSRDVYTTDYYR--------------------------------------------------------V 180 (280)
T ss_pred CCCeEEECCcccceecccCccee--------------------------------------------------------c
Confidence 99999999999986432110000 0
Q ss_pred cccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhH
Q psy8260 283 MTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQA 361 (427)
Q Consensus 283 ~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 361 (427)
.....+++.|+|||++.+..+...+|+||+|++++.+.+ +..+|................. .......+.++
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 253 (280)
T cd05049 181 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRL-------LQRPRTCPSEV 253 (280)
T ss_pred CCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHH
Confidence 011234677888888887778888999999999977654 4444433222222221111111 11123467899
Q ss_pred HHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 362 IDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 362 ~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
++||.+||+.||.+|||++|+++
T Consensus 254 ~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 254 YDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999999999999985
No 270
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=5.4e-35 Score=275.50 Aligned_cols=249 Identities=25% Similarity=0.385 Sum_probs=181.1
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHH-HhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRM-LKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~-l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.+|.|+||.||. +.+..+|+.||||.+.+..... ........|..+ ....+|+||+++++++... ...|+
T Consensus 2 ~~l~~g~~~~v~~-a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~------~~~~l 74 (260)
T cd05611 2 KPISKGAFGSVYL-AKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK------DYLYL 74 (260)
T ss_pred ccCCcCCCeeEEE-EEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC------CeEEE
Confidence 4689999999996 4566789999999986532211 122334455544 4456999999999998653 45788
Q ss_pred EeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
++|++ +++|.++++. ..+++..+..++.|++.||.|||+.+++||||+|+||+++.++.+||+|||+++..... .
T Consensus 75 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-~-- 151 (260)
T cd05611 75 VMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN-K-- 151 (260)
T ss_pred EEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceecccc-c--
Confidence 98888 7899998865 56899999999999999999999999999999999999999999999999987642210 1
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
...|++.|+|||.+.+..+..
T Consensus 152 -----------------------------------------------------------~~~~~~~y~~pe~~~~~~~~~ 172 (260)
T cd05611 152 -----------------------------------------------------------KFVGTPDYLAPETILGVGDDK 172 (260)
T ss_pred -----------------------------------------------------------cCCCCcCccChhhhcCCCCcc
Confidence 113455677777766655666
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH---HHH
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA---EQA 382 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta---~e~ 382 (427)
++|+|++|++++.+.++..+|..................... ......++++.++|.+||+.||++|+|+ +|+
T Consensus 173 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 173 MSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPE----EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred hhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCC----cccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 789999999998886555555332211111111111111111 1223568899999999999999999955 799
Q ss_pred hcCCCCCCC
Q psy8260 383 LAHPYLSQY 391 (427)
Q Consensus 383 L~Hp~f~~~ 391 (427)
|+||||.+.
T Consensus 249 l~~~~~~~~ 257 (260)
T cd05611 249 KSHPFFKSI 257 (260)
T ss_pred HcChHhhcC
Confidence 999999765
No 271
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.9e-35 Score=274.45 Aligned_cols=247 Identities=24% Similarity=0.334 Sum_probs=186.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++.+.||.|+||.||.+ .+..+++.||+|.+.... .....+...+|+.+++.++||||+++++.+... ..+
T Consensus 2 y~~~~~lg~g~~g~v~~~-~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~ 73 (255)
T cd08219 2 YNVLRVVGEGSFGRALLV-QHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD------GHL 73 (255)
T ss_pred ceEEEEeeccCCeEEEEE-EEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC------CEE
Confidence 667889999999999964 567789999999886432 233455677899999999999999999988654 467
Q ss_pred EEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
|++++++ +++|.+.+.. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++.....
T Consensus 74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 8999888 6788887753 35899999999999999999999999999999999999999999999999987643211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.. ......|++.|+|||++.+.
T Consensus 154 ~~----------------------------------------------------------~~~~~~~~~~~~aPE~~~~~ 175 (255)
T cd08219 154 GA----------------------------------------------------------YACTYVGTPYYVPPEIWENM 175 (255)
T ss_pred cc----------------------------------------------------------ccccccCCccccCHHHHccC
Confidence 00 00122466778888887776
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHH
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQ 381 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e 381 (427)
.+..++|+|++|++++.+.++..+|................ . .......+.++.+||.+||+.||.+|||+.+
T Consensus 176 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 248 (255)
T cd08219 176 PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS--Y-----KPLPSHYSYELRSLIKQMFKRNPRSRPSATT 248 (255)
T ss_pred CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC--C-----CCCCcccCHHHHHHHHHHHhCCcccCCCHHH
Confidence 67778899999999988866655554322111111111110 0 0112346788999999999999999999999
Q ss_pred HhcC
Q psy8260 382 ALAH 385 (427)
Q Consensus 382 ~L~H 385 (427)
+++-
T Consensus 249 il~~ 252 (255)
T cd08219 249 ILSR 252 (255)
T ss_pred Hhhc
Confidence 9863
No 272
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=8e-35 Score=279.96 Aligned_cols=261 Identities=19% Similarity=0.221 Sum_probs=183.4
Q ss_pred ccCcceeeccccCcccccEEEEeEEeC-------------cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCce
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDS-------------VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVI 127 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~-------------~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv 127 (427)
+...+|.+.+.||+|+||.||.+.... .+...||+|.+... ........+.+|++++++++||||+
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcC
Confidence 345678999999999999999654321 12245899988653 2334455678999999999999999
Q ss_pred eeeeeeecCccccCCceEEEEeccC-CCCHHHHHhhC-------------CCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q psy8260 128 GLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ-------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRD 193 (427)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~-------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrD 193 (427)
++++++... ...++++|++ +++|.+++... .+++..+..++.|++.||.|||++|++|||
T Consensus 81 ~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 154 (295)
T cd05097 81 RLLGVCVSD------DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRD 154 (295)
T ss_pred eEEEEEcCC------CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 999998643 3568888877 68998887532 267788889999999999999999999999
Q ss_pred CCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhcc
Q psy8260 194 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDF 273 (427)
Q Consensus 194 LKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~ 273 (427)
|||+||+++.++.+||+|||+++........
T Consensus 155 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------------- 185 (295)
T cd05097 155 LATRNCLVGNHYTIKIADFGMSRNLYSGDYY------------------------------------------------- 185 (295)
T ss_pred cChhhEEEcCCCcEEecccccccccccCcce-------------------------------------------------
Confidence 9999999999999999999998643211000
Q ss_pred CCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHh--CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHH
Q psy8260 274 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFR 351 (427)
Q Consensus 274 g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~l--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (427)
.......+++.|+|||++.+..+..++|+||+|++++.+ +.+..+|.......................+.
T Consensus 186 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (295)
T cd05097 186 -------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYL 258 (295)
T ss_pred -------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccC
Confidence 000112346678888888777777888999999999877 33443333211111111110000000000001
Q ss_pred hhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 352 QVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 352 ~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
...+..++.+.|||.+||+.||.+|||++++++
T Consensus 259 ~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 259 SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 112235688999999999999999999999975
No 273
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.6e-35 Score=277.53 Aligned_cols=255 Identities=18% Similarity=0.353 Sum_probs=188.4
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC---CCCceeeeeeeecCccccCC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN---HENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~~~~~~~~ 142 (427)
|++.+.+|.|+||.||.+. +..+++.||+|.+.... .......+.+|+.+++.++ |||++++++++...
T Consensus 3 y~~~~~l~~g~~g~v~~~~-~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~------ 74 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGK-HVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG------ 74 (277)
T ss_pred hhhhhheeccCCceEEEEE-EcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC------
Confidence 5667889999999999754 56789999999886532 2333456778999999886 99999999987543
Q ss_pred ceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
...+++++++ +++|.++++.+.+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++......
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 75 PRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred CEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 4578888877 779999988888999999999999999999999999999999999999999999999999988643221
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN- 300 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~- 300 (427)
.. ......|+..|+|||++.+
T Consensus 155 ~~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 176 (277)
T cd06917 155 SS----------------------------------------------------------KRSTFVGTPYWMAPEVITEG 176 (277)
T ss_pred cc----------------------------------------------------------ccccccCCcceeCHHHhccC
Confidence 10 0011235566777776643
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
..+...+|+|++|++++.+.++..+|....... ............+. ....++++.+||.+||+.||++|||+.
T Consensus 177 ~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~ 250 (277)
T cd06917 177 KYYDTKADIWSLGITIYEMATGNPPYSDVDAFR----AMMLIPKSKPPRLE--DNGYSKLLREFVAACLDEEPKERLSAE 250 (277)
T ss_pred CccccchhHHHHHHHHHHHHhCCCCCCCCChhh----hhhccccCCCCCCC--cccCCHHHHHHHHHHcCCCcccCcCHH
Confidence 234567899999999987755555543221111 11111000000000 112578899999999999999999999
Q ss_pred HHhcCCCCCCCC
Q psy8260 381 QALAHPYLSQYS 392 (427)
Q Consensus 381 e~L~Hp~f~~~~ 392 (427)
|+++||||++..
T Consensus 251 ~il~~~~~~~~~ 262 (277)
T cd06917 251 ELLKSKWIKAHS 262 (277)
T ss_pred HHhhChHhhccc
Confidence 999999997654
No 274
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.7e-34 Score=272.99 Aligned_cols=258 Identities=20% Similarity=0.337 Sum_probs=191.5
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC---CCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF---QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
..|.+++.||+|+||.||. +.+..+|..||+|.+.... ........+.+|++++++++||||+++++.+....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~-~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--- 77 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYL-CYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE--- 77 (264)
T ss_pred CceeeeeeEccCCCeEEEE-EEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC---
Confidence 3578899999999999996 4567789999999875321 12234456778999999999999999999875431
Q ss_pred CCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
...+++++|++ +++|.+.+.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++..
T Consensus 78 -~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 78 -EKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred -CCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 23567888877 6789888764 56899999999999999999999999999999999999999999999999998753
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
...... . .......|+..|+|||++
T Consensus 157 ~~~~~~---------~----------------------------------------------~~~~~~~~~~~y~aPE~~ 181 (264)
T cd06653 157 QTICMS---------G----------------------------------------------TGIKSVTGTPYWMSPEVI 181 (264)
T ss_pred cccccc---------C----------------------------------------------ccccccCCcccccCHhhh
Confidence 211000 0 001123467778888888
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
.+......+|+|++|++++.+-++..+|..........+.. ..+.. .......++++.|||.+||+ +|.+|||
T Consensus 182 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~-----~~~p~~~~~~~~~~i~~~l~-~~~~r~~ 254 (264)
T cd06653 182 SGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA-TQPTK-----PMLPDGVSDACRDFLKQIFV-EEKRRPT 254 (264)
T ss_pred cCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH-cCCCC-----CCCCcccCHHHHHHHHHHhc-CcccCcc
Confidence 77667778899999999988865555553221111111111 11110 11234578899999999999 5799999
Q ss_pred HHHHhcCCCC
Q psy8260 379 AEQALAHPYL 388 (427)
Q Consensus 379 a~e~L~Hp~f 388 (427)
+.++++|||.
T Consensus 255 ~~~~~~~~~~ 264 (264)
T cd06653 255 AEFLLRHPFV 264 (264)
T ss_pred HHHHhcCCCC
Confidence 9999999994
No 275
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.3e-35 Score=277.92 Aligned_cols=271 Identities=25% Similarity=0.366 Sum_probs=197.1
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~ 142 (427)
.|.+.+.||.|+||.||.+ .+..+|+.||+|++..... .......+.+|+.++++++ ||||+++++++...
T Consensus 2 ~y~~~~~lg~g~~~~vy~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~------ 74 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLA-KEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE------ 74 (280)
T ss_pred CceEeeeecCCCceEEEEE-EEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC------
Confidence 4778889999999999965 4566899999998865322 2233456778999999998 99999999887543
Q ss_pred ceEEEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
...+++++++ +++|.+++... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 75 ENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred ceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 4678999988 88999888664 799999999999999999999999999999999999999999999999999875543
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
..........|+.+. ..............|+..|+|||++..
T Consensus 155 ~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~Pe~~~~ 196 (280)
T cd05581 155 NSSPESNKGDATNID--------------------------------------SQIEKNRRRFASFVGTAEYVSPELLNE 196 (280)
T ss_pred ccccccCCCCCcccc--------------------------------------ccccccccccccccCCccccCHHHhCC
Confidence 221110000111000 000000011234467889999999887
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH-
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA- 379 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta- 379 (427)
......+|+|++|++++.+-++..++................. ......++.+.+||.+||+.||.+|||+
T Consensus 197 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 268 (280)
T cd05581 197 KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY--------SFPPNFPPDAKDLIEKLLVLDPQDRLGVN 268 (280)
T ss_pred CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC--------CCCCccCHHHHHHHHHHhcCCHhhCCCcc
Confidence 7777788999999998777555444432211111111111100 1123457889999999999999999999
Q ss_pred ---HHHhcCCCC
Q psy8260 380 ---EQALAHPYL 388 (427)
Q Consensus 380 ---~e~L~Hp~f 388 (427)
+|+|+||||
T Consensus 269 ~~~~~ll~~~~~ 280 (280)
T cd05581 269 EGYDELKAHPFF 280 (280)
T ss_pred cCHHHHhcCCCC
Confidence 999999998
No 276
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8e-35 Score=277.66 Aligned_cols=254 Identities=37% Similarity=0.590 Sum_probs=181.7
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
|.+.+.||.|+||.||.+ ....+++.||||++...... .......+|+..+++++ ||||+++++++... ..
T Consensus 1 y~~~~~ig~g~~g~v~~~-~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~------~~ 72 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLA-RNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFREN------DE 72 (283)
T ss_pred CeeheeeccCCceEEEEE-EECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcC------Cc
Confidence 457788999999999975 45667899999998654332 22334567999999999 99999999987653 46
Q ss_pred EEEEeccCCCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 145 VYMVTHLMGADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.++++++++++|.+.+... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 73 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 73 LYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred EEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 7899999999998877543 6899999999999999999999999999999999999999999999999998654321
Q ss_pred --cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 222 --MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 222 --~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.+...++. .|+|||++.
T Consensus 153 ~~~~~~~~~~-------------------------------------------------------------~~~aPE~~~ 171 (283)
T cd07830 153 PPYTDYVSTR-------------------------------------------------------------WYRAPEILL 171 (283)
T ss_pred CCcCCCCCcc-------------------------------------------------------------cccCceeee
Confidence 12233444 455555442
Q ss_pred h-ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh----------------------cCCCCCcccHHhhcCC
Q psy8260 300 N-WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN----------------------SLPLLTKKDFRQVFKG 356 (427)
Q Consensus 300 ~-~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~ 356 (427)
+ ..+..++|+||+|++++.+.++..+|......+...+... ..+..........+..
T Consensus 172 ~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (283)
T cd07830 172 RSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPN 251 (283)
T ss_pred cCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHccc
Confidence 2 2244567888888887766444333321111111111100 0011111122333444
Q ss_pred CChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 357 ANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 357 ~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
.++++++||.+||+.||.+|||++|++.||||
T Consensus 252 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 252 ASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred CCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 57889999999999999999999999999997
No 277
>KOG0983|consensus
Probab=100.00 E-value=1.2e-35 Score=267.17 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=194.2
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.++...+|.|+-|.|++ +..+++|...|||.+.+.. +....++++..+.++.+.+ .|.||+.+++|..+ ..
T Consensus 94 l~~l~dlGsGtcG~V~k-~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n------~d 165 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWK-MRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN------TD 165 (391)
T ss_pred hhhHHhhcCCCccceEE-EEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC------ch
Confidence 44556899999999995 5567899999999997653 4556677888888776654 79999999999865 34
Q ss_pred EEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 145 VYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
+.+.||+|+..+..+++. +.++|..+-.+...++.||.||.. +||||||+||+|||+|+.|++|+||||++..+...
T Consensus 166 V~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 166 VFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc
Confidence 678899998888887764 679999999999999999999975 58999999999999999999999999998765432
Q ss_pred --cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 222 --MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 222 --~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.+...|-+.|||||-|.-. .
T Consensus 246 kAhtrsAGC~~YMaPERidp~----------------------------------------------------------~ 267 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPP----------------------------------------------------------D 267 (391)
T ss_pred cccccccCCccccCccccCCC----------------------------------------------------------C
Confidence 2334555666666654210 0
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
+..|+-.+|+||||+.+++|.++..|+...... +...+.++..|...+ .-.+.|+++.+|+..||++|+.+||.
T Consensus 268 ~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~-----~~~gFSp~F~~fv~~CL~kd~r~RP~ 342 (391)
T KOG0983|consen 268 KPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLP-----GHMGFSPDFQSFVKDCLTKDHRKRPK 342 (391)
T ss_pred CCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCC-----cccCcCHHHHHHHHHHhhcCcccCcc
Confidence 112445679999999999998888777543222 223344444332111 11236999999999999999999999
Q ss_pred HHHHhcCCCCCCCC
Q psy8260 379 AEQALAHPYLSQYS 392 (427)
Q Consensus 379 a~e~L~Hp~f~~~~ 392 (427)
-.++|+|||+..+.
T Consensus 343 Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 343 YNKLLEHPFIKRYE 356 (391)
T ss_pred hHHHhcCcceeecc
Confidence 99999999998764
No 278
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.6e-34 Score=273.30 Aligned_cols=253 Identities=21% Similarity=0.289 Sum_probs=186.8
Q ss_pred CcceeeccccCcccccEEEEeEEeC--cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDS--VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~--~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
.++|++.+.||+|+||.||++.... .+...||||.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS---- 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC----
Confidence 4568899999999999999876643 245689999886543 344455678999999999999999999987643
Q ss_pred CCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 78 --~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 78 --RPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred --CceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 3468888877 6799998854 3689999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
........ ......+++.|+|||.
T Consensus 156 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~y~~Pe~ 179 (266)
T cd05033 156 LEDSEATY--------------------------------------------------------TTKGGKIPIRWTAPEA 179 (266)
T ss_pred ccccccce--------------------------------------------------------eccCCCCCccccChhh
Confidence 43111000 0001123566888888
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
+.+..+...+|+|++|++++.+.+ +..++.......... ........ ......++.+.+|+.+||+.||++|
T Consensus 180 ~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~R 252 (266)
T cd05033 180 IAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIK-AVEDGYRL------PPPMDCPSALYQLMLDCWQKDRNER 252 (266)
T ss_pred hccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHH-HHHcCCCC------CCCCCCCHHHHHHHHHHcCCCcccC
Confidence 777667778899999999887533 333333221111111 11111000 0113457889999999999999999
Q ss_pred CCHHHHhcC
Q psy8260 377 ITAEQALAH 385 (427)
Q Consensus 377 ~ta~e~L~H 385 (427)
||++|++++
T Consensus 253 p~~~ei~~~ 261 (266)
T cd05033 253 PTFSQIVST 261 (266)
T ss_pred cCHHHHHHH
Confidence 999999875
No 279
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=7.1e-35 Score=286.67 Aligned_cols=256 Identities=20% Similarity=0.316 Sum_probs=185.3
Q ss_pred cccCcceeeccccCcccccEEEEeEE----eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSAL----DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFH 134 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~----~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~ 134 (427)
++..++|.+.+.||+|+||.||.+.. +..+++.||||.+.... .......+.+|+.+|.++ +||||+++++++.
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 55667899999999999999997653 34578899999986432 233345678999999999 6899999998764
Q ss_pred cCccccCCceEEEEeccC-CCCHHHHHhhC--------------------------------------------------
Q psy8260 135 SNTCLADFKNVYMVTHLM-GADLNNILRTQ-------------------------------------------------- 163 (427)
Q Consensus 135 ~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~-------------------------------------------------- 163 (427)
.. ...+++++||+ +++|.+++...
T Consensus 82 ~~-----~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (343)
T cd05103 82 KP-----GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEK 156 (343)
T ss_pred cC-----CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCC
Confidence 32 23578888888 78998877531
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 164 ------------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 164 ------------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 234 (343)
T cd05103 157 SLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-- 234 (343)
T ss_pred ccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc--
Confidence 256777888999999999999999999999999999999999999999999864321100
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.. ......+++.|+|||++.+..+..
T Consensus 235 ----------~~--------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ 260 (343)
T cd05103 235 ----------YV--------------------------------------------RKGDARLPLKWMAPETIFDRVYTI 260 (343)
T ss_pred ----------hh--------------------------------------------hcCCCCCCcceECcHHhcCCCCCc
Confidence 00 000112456688888887777778
Q ss_pred CCCHHHHHHHHHHh---CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 306 QTDIHQLNLIMEML---GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 306 ~~d~~slg~i~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
++|+|++|++++.+ |..|.+ .................. ......++++.+++.+||+.||++|||+.|+
T Consensus 261 ~~Di~slG~~l~el~~~g~~p~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~cl~~~p~~Rps~~ei 332 (343)
T cd05103 261 QSDVWSFGVLLWEIFSLGASPYP--GVKIDEEFCRRLKEGTRM------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 332 (343)
T ss_pred hhhHHHHHHHHHHHHHCCCCCCC--CccccHHHHHHHhccCCC------CCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 88999999998765 444432 111111111111111111 0112357789999999999999999999999
Q ss_pred hcC
Q psy8260 383 LAH 385 (427)
Q Consensus 383 L~H 385 (427)
++|
T Consensus 333 l~~ 335 (343)
T cd05103 333 VEH 335 (343)
T ss_pred HHH
Confidence 987
No 280
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.2e-35 Score=309.53 Aligned_cols=270 Identities=24% Similarity=0.306 Sum_probs=192.0
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
++|.+.+.||+|+||.||. +.+..+|+.||||++..... .....+++.+|+++++.++||||+++++++...
T Consensus 2 grYeIi~~LGkGgfG~VYl-A~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~------ 74 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYL-AYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG------ 74 (932)
T ss_pred CCeEEEEEEecCCCEEEEE-EEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC------
Confidence 5688999999999999996 56778899999999865432 233456688999999999999999999987643
Q ss_pred ceEEEEeccC-CCCHHHHHhh------------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEE
Q psy8260 143 KNVYMVTHLM-GADLNNILRT------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl 209 (427)
...|++|+++ |++|.+++.. ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 75 ~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKL 154 (932)
T PRK13184 75 DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVI 154 (932)
T ss_pred CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEE
Confidence 4578889887 7899888753 12455677889999999999999999999999999999999999999
Q ss_pred eeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccc
Q psy8260 210 LDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 289 (427)
Q Consensus 210 ~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt 289 (427)
+|||+++........ ..+.....+. ..+ .........+||
T Consensus 155 iDFGLAk~i~~~~~~-~~~l~~~~~~------------------s~~---------------------s~~t~~g~~vGT 194 (932)
T PRK13184 155 LDWGAAIFKKLEEED-LLDIDVDERN------------------ICY---------------------SSMTIPGKIVGT 194 (932)
T ss_pred EecCcceeccccccc-cccccccccc------------------ccc---------------------cccccCCCCCCC
Confidence 999999754221100 0000000000 000 000011234699
Q ss_pred ccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 290 RWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 290 ~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
+.|+|||++.+..+..++|+||+|++++.|.++..||........... ... ...... ..+..+++.+.+++.+||
T Consensus 195 ~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~--~~i--~~P~~~-~p~~~iP~~L~~LI~rcL 269 (932)
T PRK13184 195 PDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR--DVI--LSPIEV-APYREIPPFLSQIAMKAL 269 (932)
T ss_pred CCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh--hhc--cChhhc-cccccCCHHHHHHHHHHc
Confidence 999999999988888889999999999888766666543221111100 000 000000 112356788999999999
Q ss_pred CCCCCCCCCHHHHhcC
Q psy8260 370 ELDSEKRITAEQALAH 385 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~H 385 (427)
+.||++|++..+.+.+
T Consensus 270 ~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 270 AVDPAERYSSVQELKQ 285 (932)
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999987666544
No 281
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.5e-34 Score=271.18 Aligned_cols=244 Identities=22% Similarity=0.290 Sum_probs=177.9
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEe
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~ 149 (427)
+.||+|+||.||.+ .+..+|+.||+|.+... ........+.+|+++++.++||||+++++++... ...++++
T Consensus 1 ~~lg~g~~g~vy~~-~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~ 72 (252)
T cd05084 1 ERIGRGNFGEVFSG-RLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK------QPIYIVM 72 (252)
T ss_pred CccCcccCccEEEE-EEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC------CCeEEEE
Confidence 36899999999974 45668899999987643 2334456678999999999999999999987653 3578888
Q ss_pred ccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccc
Q psy8260 150 HLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 226 (427)
Q Consensus 150 e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 226 (427)
|++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 73 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~- 151 (252)
T cd05084 73 ELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS- 151 (252)
T ss_pred eeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccc-
Confidence 877 7799988854 358999999999999999999999999999999999999999999999999986432110000
Q ss_pred ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCC
Q psy8260 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306 (427)
Q Consensus 227 gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~ 306 (427)
......++..|+|||.+.+..+...
T Consensus 152 -------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~ 176 (252)
T cd05084 152 -------------------------------------------------------TGGMKQIPVKWTAPEALNYGRYSSE 176 (252)
T ss_pred -------------------------------------------------------cCCCCCCceeecCchhhcCCCCChH
Confidence 0000112356888888877667777
Q ss_pred CCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 307 TDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 307 ~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
+|+||+|++++.+-+ +..++.... .............. ......+.++.+||.+||+.||++|||++|+++
T Consensus 177 ~Dv~slG~il~e~~~~~~~p~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 177 SDVWSFGILLWEAFSLGAVPYANLS-NQQTREAIEQGVRL------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccC-HHHHHHHHHcCCCC------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 899999999976532 333332211 11111121111100 112245788999999999999999999999874
No 282
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.6e-34 Score=279.04 Aligned_cols=256 Identities=23% Similarity=0.311 Sum_probs=187.8
Q ss_pred cccCcceeeccccCcccccEEEEeEE----eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSAL----DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFH 134 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~----~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~ 134 (427)
.+...+|.+.+.||+|+||.||.+.. ...++..||||.+.... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 45667899999999999999997653 23456789999886542 233445678999999999 8999999999876
Q ss_pred cCccccCCceEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEe
Q psy8260 135 SNTCLADFKNVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKIL 210 (427)
Q Consensus 135 ~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~ 210 (427)
.. ...|+++|++ +++|.++++.. .+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+
T Consensus 110 ~~------~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~ 183 (302)
T cd05055 110 IG------GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKIC 183 (302)
T ss_pred cC------CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEEC
Confidence 53 3578888887 68999888643 28999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccc
Q psy8260 211 DFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR 290 (427)
Q Consensus 211 DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~ 290 (427)
|||+++......... ......+++
T Consensus 184 dfg~~~~~~~~~~~~--------------------------------------------------------~~~~~~~~~ 207 (302)
T cd05055 184 DFGLARDIMNDSNYV--------------------------------------------------------VKGNARLPV 207 (302)
T ss_pred CCcccccccCCCcee--------------------------------------------------------ecCCCCccc
Confidence 999986432211000 000123466
Q ss_pred cccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 291 WYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 291 ~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
.|+|||++.+..+...+|+||+|++++.+.+ +..++..........+........ ......++++.+||.+||
T Consensus 208 ~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl 281 (302)
T cd05055 208 KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM------AQPEHAPAEIYDIMKTCW 281 (302)
T ss_pred ccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC------CCCCCCCHHHHHHHHHHc
Confidence 7888888877777778899999999977532 222332211111121221111000 011245789999999999
Q ss_pred CCCCCCCCCHHHHhc
Q psy8260 370 ELDSEKRITAEQALA 384 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~ 384 (427)
..||++|||+.|+++
T Consensus 282 ~~~p~~Rpt~~ell~ 296 (302)
T cd05055 282 DADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCchhCcCHHHHHH
Confidence 999999999999985
No 283
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.5e-35 Score=282.46 Aligned_cols=257 Identities=21% Similarity=0.353 Sum_probs=192.2
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.|.+.+.+|.|+||.||.+ .+..++..||+|.+.... ....+.+.+|+.+++.++||||+++++.+... .
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~-~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~------~ 89 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTA-IDVATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVG------D 89 (293)
T ss_pred hhceeeeEecCCCCeEEEEE-EEcCCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeeeC------C
Confidence 56788899999999999965 566678999999885432 22345578999999999999999999987643 4
Q ss_pred eEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 144 NVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
..|++++++ +++|.+++....+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 90 ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred cEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 578888887 7899999988789999999999999999999999999999999999999999999999999875322110
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. ......|++.|+|||++....
T Consensus 170 ~----------------------------------------------------------~~~~~~~~~~y~~PE~~~~~~ 191 (293)
T cd06647 170 S----------------------------------------------------------KRSTMVGTPYWMAPEVVTRKA 191 (293)
T ss_pred c----------------------------------------------------------ccccccCChhhcCchhhccCC
Confidence 0 001123566677777766555
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
+...+|+|++|++++.+.++..+|.......... .........+ .....+++..+|||.+||..||.+|||++|+
T Consensus 192 ~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~i 266 (293)
T cd06647 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY----LIATNGTPEL-QNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 266 (293)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee----ehhcCCCCCC-CCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 6667899999999988866655553221111000 0000000000 1122356789999999999999999999999
Q ss_pred hcCCCCCCCC
Q psy8260 383 LAHPYLSQYS 392 (427)
Q Consensus 383 L~Hp~f~~~~ 392 (427)
++||||....
T Consensus 267 l~h~~~~~~~ 276 (293)
T cd06647 267 LQHPFLKIAK 276 (293)
T ss_pred hcCHHHhcCc
Confidence 9999997653
No 284
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.5e-34 Score=272.36 Aligned_cols=255 Identities=27% Similarity=0.389 Sum_probs=192.7
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.|++.+.||.|++|.||++ .+..+++.||||++...... .....+.+|+..+..++|+||+++++++... ..
T Consensus 2 ~~~~~~~i~~g~~~~v~~~-~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~ 73 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKV-RHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKE------GE 73 (264)
T ss_pred cceeeeeeeecCCeEEEEE-EEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC------Ce
Confidence 4678899999999999965 55568999999998654322 4456688999999999999999999987654 45
Q ss_pred EEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
.+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+ +|++||||+|+||+++.++.++|+|||++......
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 74 ISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 78888887 5899998865 678999999999999999999999 99999999999999999999999999988644321
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
... .....++..|+|||++...
T Consensus 154 ~~~----------------------------------------------------------~~~~~~~~~y~~pE~~~~~ 175 (264)
T cd06623 154 LDQ----------------------------------------------------------CNTFVGTVTYMSPERIQGE 175 (264)
T ss_pred CCc----------------------------------------------------------ccceeecccccCHhhhCCC
Confidence 100 0112355667777776666
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhc--CcHHHHHHHhcCCCCCcccHHhhcCC-CChhHHHHHHHhcCCCCCCCCC
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKI--SSDSARKYINSLPLLTKKDFRQVFKG-ANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~dLi~~mL~~dP~~R~t 378 (427)
.+...+|+|++|++++.+.++..++.... ......+........ ..... .+..+.+||.+||..||++|||
T Consensus 176 ~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~R~~ 249 (264)
T cd06623 176 SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPP------SLPAEEFSPEFRDFISACLQKDPKKRPS 249 (264)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCC------CCCcccCCHHHHHHHHHHccCChhhCCC
Confidence 56677899999999988866554443221 111111111111100 11122 5788999999999999999999
Q ss_pred HHHHhcCCCCCCC
Q psy8260 379 AEQALAHPYLSQY 391 (427)
Q Consensus 379 a~e~L~Hp~f~~~ 391 (427)
++|+++||||+..
T Consensus 250 ~~~ll~~~~~~~~ 262 (264)
T cd06623 250 AAELLQHPFIKKA 262 (264)
T ss_pred HHHHHhCHHHHhc
Confidence 9999999999764
No 285
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2e-34 Score=280.31 Aligned_cols=257 Identities=21% Similarity=0.297 Sum_probs=188.1
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
.+..|...+.||+|+||.||++ .+..+|..||+|++..... .......+.+|+++++.++|||++++++++...
T Consensus 23 ~~~~f~~~~~lg~G~~~~v~~~-~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 97 (317)
T cd06635 23 PEKLFTDLREIGHGSFGAVYFA-RDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE---- 97 (317)
T ss_pred chhhhhhhheeccCCCeEEEEE-EEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC----
Confidence 3445777889999999999965 4566889999999864322 233445678999999999999999999987653
Q ss_pred CCceEEEEeccCCCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
...+++++++.++|.+++. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 98 --~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~ 175 (317)
T cd06635 98 --HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIA 175 (317)
T ss_pred --CeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCcccc
Confidence 3578999999888877764 356899999999999999999999999999999999999999999999999987643
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
.. .....++..|+|||++...
T Consensus 176 ~~-~~~~~~~~~y~aPE~~~~~---------------------------------------------------------- 196 (317)
T cd06635 176 SP-ANSFVGTPYWMAPEVILAM---------------------------------------------------------- 196 (317)
T ss_pred CC-cccccCCccccChhhhhcC----------------------------------------------------------
Confidence 21 1222344445555543210
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcC-CCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSL-PLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
.......++|+|++|++++.+.++..+|................ +... ....++.+++||.+||+.||.+||
T Consensus 197 ~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rp 269 (317)
T cd06635 197 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ-------SNEWSDYFRNFVDSCLQKIPQDRP 269 (317)
T ss_pred CCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCC-------CccccHHHHHHHHHHccCCcccCc
Confidence 11124456799999999988855555443322112222221111 1110 123567899999999999999999
Q ss_pred CHHHHhcCCCCCCC
Q psy8260 378 TAEQALAHPYLSQY 391 (427)
Q Consensus 378 ta~e~L~Hp~f~~~ 391 (427)
|++|+++|||+...
T Consensus 270 t~~~il~~~~~~~~ 283 (317)
T cd06635 270 TSEELLKHMFVLRE 283 (317)
T ss_pred CHHHHHhChhhhcc
Confidence 99999999999653
No 286
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-34 Score=276.99 Aligned_cols=253 Identities=18% Similarity=0.213 Sum_probs=183.4
Q ss_pred CcceeeccccCcccccEEEEeEEeC----cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDS----VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
...|.+.+.||+|+||.||.+.... .+++.||||++.... .......+.+|+.++..++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-- 80 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE-- 80 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--
Confidence 3457788999999999999876432 346789999987442 333445677899999999999999999987654
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeE
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT-----------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIA 200 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~-----------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 200 (427)
...+++++++ +++|..++.. ..+++..+..++.|++.||.|||++||+||||||+|||
T Consensus 81 ----~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil 156 (283)
T cd05091 81 ----QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVL 156 (283)
T ss_pred ----CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheE
Confidence 3467777776 6788887742 24788889999999999999999999999999999999
Q ss_pred EcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCc
Q psy8260 201 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTE 280 (427)
Q Consensus 201 l~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~ 280 (427)
+++++.+||+|||+++........
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------------------- 180 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYY-------------------------------------------------------- 180 (283)
T ss_pred ecCCCceEecccccccccccchhe--------------------------------------------------------
Confidence 999999999999998753211000
Q ss_pred cccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 281 NEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 281 ~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
.......+++.|+|||++.+..+...+|+||+|++++.+.+ +..++......+.... ....... ......+.
T Consensus 181 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-i~~~~~~------~~~~~~~~ 253 (283)
T cd05091 181 KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM-IRNRQVL------PCPDDCPA 253 (283)
T ss_pred eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHcCCcC------CCCCCCCH
Confidence 00011234667888888876667778899999999987644 3333322211111111 1111110 11234577
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
+..+|+.+||+.||.+|||++|+++.
T Consensus 254 ~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 254 WVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 88999999999999999999999864
No 287
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.7e-34 Score=272.96 Aligned_cols=252 Identities=21% Similarity=0.291 Sum_probs=185.6
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC-CCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF-QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
+.|.+.+.+|.|+||.||.+ .+..+++.||||.+.... ........+.+|+++++.++||||+++++++...
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~-~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRA-TCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED------ 74 (267)
T ss_pred cceeeeeeeccCCCeeEEEE-EEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC------
Confidence 46788999999999999964 466689999999875432 2334445677899999999999999999987643
Q ss_pred ceEEEEeccC-CCCHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
...+++++++ +++|.+++. ...+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 75 NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccce
Confidence 4578888888 578887764 2347899999999999999999999999999999999999999999999999876
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
....... ......|++.|+|||
T Consensus 155 ~~~~~~~----------------------------------------------------------~~~~~~~~~~~~aPE 176 (267)
T cd08228 155 FFSSKTT----------------------------------------------------------AAHSLVGTPYYMSPE 176 (267)
T ss_pred eccchhH----------------------------------------------------------HHhcCCCCccccChh
Confidence 4322100 001123566777888
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
++.+......+|+|++|++++.+-++..++...... .......... ..+.. .....+.++.+||.+||+.||.+
T Consensus 177 ~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~li~~cl~~~p~~ 251 (267)
T cd08228 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC-DYPPL----PTEHYSEKLRELVSMCIYPDPDQ 251 (267)
T ss_pred hhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC-CCCCC----ChhhcCHHHHHHHHHHCCCCccc
Confidence 776666667789999999998886555444322111 1111111111 11110 01235678999999999999999
Q ss_pred CCCHHHHhcC
Q psy8260 376 RITAEQALAH 385 (427)
Q Consensus 376 R~ta~e~L~H 385 (427)
|||+.++++.
T Consensus 252 Rp~~~~vl~~ 261 (267)
T cd08228 252 RPDIGYVHQI 261 (267)
T ss_pred CcCHHHHHHH
Confidence 9999999874
No 288
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.4e-35 Score=274.67 Aligned_cols=257 Identities=29% Similarity=0.422 Sum_probs=189.2
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEec
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e 150 (427)
+|.|+||.||.+ .+..+|+.||+|.+...... ......+.+|+++++.++||||+++++.+... ...|++++
T Consensus 1 lg~g~~~~vy~~-~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~~~~lv~e 73 (265)
T cd05579 1 ISKGAYGRVFLA-KKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK------KNLYLVME 73 (265)
T ss_pred CCCCCceEEEEE-EECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC------cEEEEEEe
Confidence 589999999965 45668999999988654221 23345677899999999999999998877543 46788888
Q ss_pred cC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccccc
Q psy8260 151 LM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228 (427)
Q Consensus 151 ~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt 228 (427)
++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.+||+|||++...........
T Consensus 74 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-- 151 (265)
T cd05579 74 YLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL-- 151 (265)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc--
Confidence 88 6799988865 5689999999999999999999999999999999999999999999999998764321110000
Q ss_pred ccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCC
Q psy8260 229 RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD 308 (427)
Q Consensus 229 ~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d 308 (427)
.++ ........+++.|+|||++........+|
T Consensus 152 ----~~~--------------------------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D 183 (265)
T cd05579 152 ----NDD--------------------------------------------EKEDKRIVGTPDYIAPEVILGQGHSKTVD 183 (265)
T ss_pred ----ccc--------------------------------------------cccccCcccCccccCHHHhcCCCCCcchh
Confidence 000 00112234677899999987777777889
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH---HHHhcC
Q psy8260 309 IHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA---EQALAH 385 (427)
Q Consensus 309 ~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta---~e~L~H 385 (427)
+|++|++++.+.++..+|.................. +... ...++++.+||.+||+.||++|||+ .|+|+|
T Consensus 184 v~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 184 WWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE-----WPED-VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC-----CCcc-ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 999999998886655554332211111111111111 1111 1247899999999999999999999 999999
Q ss_pred CCCCCC
Q psy8260 386 PYLSQY 391 (427)
Q Consensus 386 p~f~~~ 391 (427)
|||+..
T Consensus 258 ~~~~~~ 263 (265)
T cd05579 258 PFFKGI 263 (265)
T ss_pred ccccCC
Confidence 999864
No 289
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.8e-34 Score=272.10 Aligned_cols=250 Identities=22% Similarity=0.291 Sum_probs=185.7
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
++....|.+.+.+|.|+||.||.+.. .++..||+|.+.... ...+.+.+|+.+++.++|+||+++++.+...
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 73 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYY--NNSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKE--- 73 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEe--cCCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC---
Confidence 45567899999999999999997653 356789999876432 2345678999999999999999999887543
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++
T Consensus 74 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 74 ---EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred ---CCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccc
Confidence 4568888887 7899988754 45788899999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+........ ...+..++..|+||
T Consensus 151 ~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~aP 173 (261)
T cd05072 151 RVIEDNEYT---------------------------------------------------------AREGAKFPIKWTAP 173 (261)
T ss_pred eecCCCcee---------------------------------------------------------ccCCCccceecCCH
Confidence 754321100 00112245668888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+..+...+|+||+|++++.+.+ +..+|............. ..... ......+.++.+||.+||..||+
T Consensus 174 E~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~li~~~l~~~p~ 246 (261)
T cd05072 174 EAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQ-RGYRM------PRMENCPDELYDIMKTCWKEKAE 246 (261)
T ss_pred HHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHH-cCCCC------CCCCCCCHHHHHHHHHHccCCcc
Confidence 88776666677899999999987754 444443221111111111 11111 11234678899999999999999
Q ss_pred CCCCHHHHhc
Q psy8260 375 KRITAEQALA 384 (427)
Q Consensus 375 ~R~ta~e~L~ 384 (427)
+|||++++++
T Consensus 247 ~Rp~~~~i~~ 256 (261)
T cd05072 247 ERPTFDYLQS 256 (261)
T ss_pred cCcCHHHHHH
Confidence 9999999864
No 290
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.6e-34 Score=273.30 Aligned_cols=255 Identities=20% Similarity=0.299 Sum_probs=187.8
Q ss_pred cccCcceeeccccCcccccEEEEeEEeC----cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeec
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDS----VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 135 (427)
++...+|.+.+.||.|+||.||.+.... .++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 4566788999999999999999765532 345789999986432 33344567799999999999999999999765
Q ss_pred CccccCCceEEEEeccC-CCCHHHHHhhC-----------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC
Q psy8260 136 NTCLADFKNVYMVTHLM-GADLNNILRTQ-----------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE 203 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~-g~~L~~~l~~~-----------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~ 203 (427)
. ...++++|++ +++|.+++... .+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus 81 ~------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~ 154 (277)
T cd05032 81 G------QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE 154 (277)
T ss_pred C------CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC
Confidence 3 4578888887 68999887532 2577888999999999999999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccc
Q psy8260 204 DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEM 283 (427)
Q Consensus 204 ~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~ 283 (427)
++.+||+|||+++........ . ..
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~-------------------~-------------------------------------~~ 178 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDYY-------------------R-------------------------------------KG 178 (277)
T ss_pred CCCEEECCcccchhhccCccc-------------------c-------------------------------------cC
Confidence 999999999998643221000 0 00
Q ss_pred ccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHH
Q psy8260 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAI 362 (427)
Q Consensus 284 ~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 362 (427)
....+|..|+|||++.+..+..++|+|++|++++.+.+ +..++.... .....+........ ......+.++.
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~ 251 (277)
T cd05032 179 GKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS-NEEVLKFVIDGGHL------DLPENCPDKLL 251 (277)
T ss_pred CCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC-HHHHHHHHhcCCCC------CCCCCCCHHHH
Confidence 11234667888888877667778899999999987754 333333221 12222222211111 11233578899
Q ss_pred HHHHHhcCCCCCCCCCHHHHhc
Q psy8260 363 DLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 363 dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
+||.+||+.||++|||+.|+++
T Consensus 252 ~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 252 ELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHHcCCChhhCCCHHHHHH
Confidence 9999999999999999999985
No 291
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.5e-34 Score=268.20 Aligned_cols=251 Identities=25% Similarity=0.440 Sum_probs=191.1
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.||.|++|.||.+ .+..+++.||+|.+............+.+|++++++++|||++++++++... ...
T Consensus 2 y~~~~~l~~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~ 74 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKG-LNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS------DSL 74 (254)
T ss_pred ceeeeEEcccCCeEEEEE-EEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC------CEE
Confidence 667889999999999964 4567889999999876554445566788999999999999999999987653 457
Q ss_pred EEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 146 YMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
+++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++........
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 75 YIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred EEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 8888887 6789888754 5789999999999999999999999999999999999999999999999999865432111
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
. .....|+..|+|||.+.+...
T Consensus 155 ~----------------------------------------------------------~~~~~~~~~y~~pe~~~~~~~ 176 (254)
T cd06627 155 D----------------------------------------------------------DASVVGTPYWMAPEVIEMSGA 176 (254)
T ss_pred c----------------------------------------------------------ccccccchhhcCHhhhcCCCC
Confidence 0 011235667778877766656
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHh
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQAL 383 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L 383 (427)
...+|+|++|++++.+-++..++..........+... . ........+++++.+||.+||..||++|||+.|++
T Consensus 177 ~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 249 (254)
T cd06627 177 STASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ--D-----DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLL 249 (254)
T ss_pred CcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--c-----CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHh
Confidence 6678999999998777554444432211111111110 0 01112235678999999999999999999999999
Q ss_pred cCCCC
Q psy8260 384 AHPYL 388 (427)
Q Consensus 384 ~Hp~f 388 (427)
+||||
T Consensus 250 ~~~~~ 254 (254)
T cd06627 250 KHPWI 254 (254)
T ss_pred cCCCC
Confidence 99997
No 292
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2e-34 Score=280.04 Aligned_cols=254 Identities=18% Similarity=0.229 Sum_probs=183.1
Q ss_pred ccCcceeeccccCcccccEEEEeEEeC---cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDS---VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
+...+|.+.+.||+|+||.||++.... ..+..||||.+... ......+.+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 345668889999999999999876432 12335999988643 3344456678999999999999999999987542
Q ss_pred cccCCceEEEEecc-CCCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCC
Q psy8260 138 CLADFKNVYMVTHL-MGADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214 (427)
Q Consensus 138 ~~~~~~~~~lv~e~-~g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGl 214 (427)
..++++++ .+++|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 82 ------~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~ 155 (316)
T cd05108 82 ------TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGL 155 (316)
T ss_pred ------CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccc
Confidence 23445554 588998888653 588889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
++......... ...+..++..|+|
T Consensus 156 a~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~y~a 179 (316)
T cd05108 156 AKLLGADEKEY--------------------------------------------------------HAEGGKVPIKWMA 179 (316)
T ss_pred cccccCCCcce--------------------------------------------------------eccCCccceeecC
Confidence 87543211000 0011234567888
Q ss_pred hHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 295 PEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 295 PEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
||++.+..+..++|+||+|++++.+.+ +..++... ...............+ .....+.++.++|.+||+.||
T Consensus 180 pE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~~p 252 (316)
T cd05108 180 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP------QPPICTIDVYMIMVKCWMIDA 252 (316)
T ss_pred hHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHhCCCCCC------CCCCCCHHHHHHHHHHccCCh
Confidence 888877778888999999999987532 33333221 1111112221111111 112356788999999999999
Q ss_pred CCCCCHHHHhcC
Q psy8260 374 EKRITAEQALAH 385 (427)
Q Consensus 374 ~~R~ta~e~L~H 385 (427)
.+|||+.+++.+
T Consensus 253 ~~Rps~~~l~~~ 264 (316)
T cd05108 253 DSRPKFRELIIE 264 (316)
T ss_pred hhCcCHHHHHHH
Confidence 999999999987
No 293
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3.7e-34 Score=277.98 Aligned_cols=250 Identities=20% Similarity=0.315 Sum_probs=185.5
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
|.....+|+|+||.||.+ .+..+|+.||+|++..... .......+.+|+++++.++|||++++++++... ..
T Consensus 23 ~~~~~~lg~g~~g~v~~~-~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 95 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFA-TNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE------HT 95 (313)
T ss_pred hhcceeeccCCCeEEEEE-EECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC------CE
Confidence 445567999999999975 5667899999999864322 233345677899999999999999999988653 45
Q ss_pred EEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 145 VYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
.|++++++.+++.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..... .
T Consensus 96 ~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-~ 174 (313)
T cd06633 96 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-A 174 (313)
T ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-C
Confidence 789999998888877743 4689999999999999999999999999999999999999999999999998753211 1
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh---
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML--- 299 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~--- 299 (427)
....|+ ..|+|||++.
T Consensus 175 ~~~~~~-------------------------------------------------------------~~y~aPE~~~~~~ 193 (313)
T cd06633 175 NSFVGT-------------------------------------------------------------PYWMAPEVILAMD 193 (313)
T ss_pred CCcccc-------------------------------------------------------------ccccChhhccccC
Confidence 122344 4455555542
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc-CCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS-LPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
...+...+|+||+|++++.+.++..|+..........+.... .+.. .....+..+++||.+||++||.+|||
T Consensus 194 ~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~P~~Rp~ 266 (313)
T cd06633 194 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL-------QSNEWTDSFRGFVDYCLQKIPQERPA 266 (313)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-------CccccCHHHHHHHHHHccCChhhCcC
Confidence 122445679999999998886665555433211222211111 1111 11234677999999999999999999
Q ss_pred HHHHhcCCCCCCC
Q psy8260 379 AEQALAHPYLSQY 391 (427)
Q Consensus 379 a~e~L~Hp~f~~~ 391 (427)
++++++||||...
T Consensus 267 ~~~~l~~~~~~~~ 279 (313)
T cd06633 267 SAELLRHDFVRRD 279 (313)
T ss_pred HHHHhcCcccCCC
Confidence 9999999999864
No 294
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.6e-34 Score=270.40 Aligned_cols=246 Identities=22% Similarity=0.278 Sum_probs=182.0
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|++.+.||+|+||.||.+.. .++..+|+|.+..... ....+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~--~~~~~~a~K~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 72 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKW--RAQIKVAIKAINEGAM---SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ------K 72 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEe--ccCceEEEEecccCCc---cHHHHHHHHHHHHHCCCCCceeEEEEEccC------C
Confidence 4578889999999999997654 3456899998764322 234577899999999999999999987543 4
Q ss_pred eEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..+++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 73 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~ 152 (256)
T cd05114 73 PLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLD 152 (256)
T ss_pred CEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCC
Confidence 578888888 6899988864 3589999999999999999999999999999999999999999999999998864321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.... ...+..++..|+|||++.+
T Consensus 153 ~~~~---------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 175 (256)
T cd05114 153 DEYT---------------------------------------------------------SSSGAKFPVKWSPPEVFNF 175 (256)
T ss_pred Ccee---------------------------------------------------------ccCCCCCchhhCChhhccc
Confidence 1000 0011224556888888877
Q ss_pred ccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
..+..++|+||+|++++.+-+ +..+|......+............ .....++++.+||.+|++.||.+|||+
T Consensus 176 ~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~li~~c~~~~p~~Rps~ 248 (256)
T cd05114 176 SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY-------RPKLASMTVYEVMYSCWHEKPEGRPTF 248 (256)
T ss_pred CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC-------CCCCCCHHHHHHHHHHccCCcccCcCH
Confidence 667778899999999987744 333443222112222221111100 112346789999999999999999999
Q ss_pred HHHhc
Q psy8260 380 EQALA 384 (427)
Q Consensus 380 ~e~L~ 384 (427)
+|+++
T Consensus 249 ~~l~~ 253 (256)
T cd05114 249 AELLR 253 (256)
T ss_pred HHHHH
Confidence 99985
No 295
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.3e-34 Score=276.19 Aligned_cols=258 Identities=22% Similarity=0.304 Sum_probs=188.4
Q ss_pred cccccCcceeeccccCcccccEEEEeEEeC----cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeee
Q psy8260 58 YSEICRGVIDIGPTLSKESFDLIFSSALDS----VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDV 132 (427)
Q Consensus 58 ~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~ 132 (427)
..++..+.|++.+.||+|+||.||++.... .....||+|.+.... .......+.+|+.+++++ +|+||++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 356777889999999999999999865432 234679999886542 334445678999999999 89999999998
Q ss_pred eecCccccCCceEEEEeccC-CCCHHHHHhh-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccC
Q psy8260 133 FHSNTCLADFKNVYMVTHLM-GADLNNILRT-----------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDL 194 (427)
Q Consensus 133 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~-----------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDL 194 (427)
+... ..++++++++ +++|..+++. ..+++..+..++.|++.||+|||++||+||||
T Consensus 85 ~~~~------~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dl 158 (293)
T cd05053 85 CTQE------GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDL 158 (293)
T ss_pred EcCC------CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence 7643 3468888876 7899988753 34788899999999999999999999999999
Q ss_pred CCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccC
Q psy8260 195 KPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFG 274 (427)
Q Consensus 195 Kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g 274 (427)
||+|||++.++.+||+|||+++.........
T Consensus 159 kp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~------------------------------------------------- 189 (293)
T cd05053 159 AARNVLVTEDHVMKIADFGLARDIHHIDYYR------------------------------------------------- 189 (293)
T ss_pred ceeeEEEcCCCeEEeCcccccccccccccee-------------------------------------------------
Confidence 9999999999999999999987543211000
Q ss_pred CCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhh
Q psy8260 275 LARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQV 353 (427)
Q Consensus 275 ~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (427)
......+++.|+|||++.+..+..++|+||+|++++.+-+ +..++..... ....+........ ..
T Consensus 190 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~------~~ 255 (293)
T cd05053 190 -------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-EELFKLLKEGYRM------EK 255 (293)
T ss_pred -------ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH-HHHHHHHHcCCcC------CC
Confidence 0001123456888888877777788899999999976532 3333322211 1111111111110 11
Q ss_pred cCCCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 354 FKGANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 354 ~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
....+.++.+||.+||..||.+|||++|++++
T Consensus 256 ~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 256 PQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred CCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 12457789999999999999999999999875
No 296
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.9e-34 Score=269.44 Aligned_cols=245 Identities=18% Similarity=0.269 Sum_probs=181.1
Q ss_pred ccCcccccEEEEeEE-eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEe
Q psy8260 71 TLSKESFDLIFSSAL-DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~-~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~ 149 (427)
.||+|+||.||.+.. ...++..||+|++..........+.+.+|+.+++.++||||+++++++.. ...++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~lv~ 74 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-------ESWMLVM 74 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-------CCcEEEE
Confidence 589999999998754 34578899999987554445556678899999999999999999988643 2457788
Q ss_pred ccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccc
Q psy8260 150 HLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA 227 (427)
Q Consensus 150 e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~g 227 (427)
+++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..........
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~- 153 (257)
T cd05116 75 ELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK- 153 (257)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee-
Confidence 877 5789888854 5689999999999999999999999999999999999999999999999999875432211000
Q ss_pred cccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCC
Q psy8260 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQT 307 (427)
Q Consensus 228 t~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~ 307 (427)
......+++.|+|||++.+..+...+
T Consensus 154 ------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 179 (257)
T cd05116 154 ------------------------------------------------------AKTHGKWPVKWYAPECMNYYKFSSKS 179 (257)
T ss_pred ------------------------------------------------------ecCCCCCCccccCHhHhccCCcCchh
Confidence 00011235678888887766667788
Q ss_pred CHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 308 DIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 308 d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
|+||+|++++.+-+ +..+|......... ..+...... ......++++.|||.+||+.||++|||++++.+
T Consensus 180 Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~i~~~~~~------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 180 DVWSFGVLMWEAFSYGQKPYKGMKGNEVT-QMIESGERM------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHCCCCC------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 99999999987643 43344322111111 122211111 122356889999999999999999999998864
No 297
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3e-34 Score=277.20 Aligned_cols=257 Identities=22% Similarity=0.298 Sum_probs=187.4
Q ss_pred ccccCcceeeccccCcccccEEEEeEEe------CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeee
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALD------SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLD 131 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~------~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~ 131 (427)
+++....|.+++.||+|+||.||.+... ..++..||+|.+... ........+.+|+.+++.+ +||||+++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 4667788999999999999999976531 234568999988643 2234456678999999999 8999999999
Q ss_pred eeecCccccCCceEEEEeccC-CCCHHHHHhhC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q psy8260 132 VFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ-----------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRD 193 (427)
Q Consensus 132 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~-----------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrD 193 (427)
++... ...|++++++ +++|.+++... .++...+..++.|++.||.|||++||+|||
T Consensus 89 ~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~d 162 (304)
T cd05101 89 ACTQD------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRD 162 (304)
T ss_pred EEecC------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 87653 4578888887 67999888542 367788899999999999999999999999
Q ss_pred CCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhcc
Q psy8260 194 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDF 273 (427)
Q Consensus 194 LKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~ 273 (427)
|||+|||++.++.+||+|||+++.........
T Consensus 163 lkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~------------------------------------------------ 194 (304)
T cd05101 163 LAARNVLVTENNVMKIADFGLARDVNNIDYYK------------------------------------------------ 194 (304)
T ss_pred cccceEEEcCCCcEEECCCccceecccccccc------------------------------------------------
Confidence 99999999999999999999987542211000
Q ss_pred CCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHh
Q psy8260 274 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQ 352 (427)
Q Consensus 274 g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (427)
......+++.|+|||++.+..+..++|+||+|++++.+-+ +..++.... .....+........ .
T Consensus 195 --------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~------~ 259 (304)
T cd05101 195 --------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRM------D 259 (304)
T ss_pred --------cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-HHHHHHHHHcCCcC------C
Confidence 0011234567888888877777778899999999877633 222232111 11111111111110 0
Q ss_pred hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 353 VFKGANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 353 ~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
.....+.++++||.+||..+|.+|||+.|+++.
T Consensus 260 ~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 260 KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 123457889999999999999999999999875
No 298
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.4e-34 Score=271.35 Aligned_cols=250 Identities=22% Similarity=0.279 Sum_probs=185.9
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
++.+..|.+.+.||+|++|.||++.. .+++.||+|.+..... ..+.+.+|+.++++++||||+++++++...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 73 (261)
T cd05068 2 EIDRTSIQLLRKLGAGQFGEVWEGLW--NNTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLE--- 73 (261)
T ss_pred ccchhheeeEEEecccCCccEEEEEe--cCCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecC---
Confidence 56677899999999999999997654 3457899999865322 235577899999999999999999987643
Q ss_pred cCCceEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...+++++++ +++|.+++... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus 74 ---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 74 ---EPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred ---CCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceE
Confidence 4578889888 88999988643 5899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+........ ...+..++..|+||
T Consensus 151 ~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~aP 173 (261)
T cd05068 151 RVIKEDIYE---------------------------------------------------------AREGAKFPIKWTAP 173 (261)
T ss_pred EEccCCccc---------------------------------------------------------ccCCCcCceeccCc
Confidence 654311000 00111234568888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+..+..++|+||+|++++.+-+ +..+|.... .............. ......+..+.++|.+||+.||.
T Consensus 174 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~P~ 246 (261)
T cd05068 174 EAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT-NAEVLQQVDQGYRM------PCPPGCPKELYDIMLDCWKEDPD 246 (261)
T ss_pred cccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCC------CCCCcCCHHHHHHHHHHhhcCcc
Confidence 88777667778899999999987644 333332211 11111111111100 01134578899999999999999
Q ss_pred CCCCHHHHhc
Q psy8260 375 KRITAEQALA 384 (427)
Q Consensus 375 ~R~ta~e~L~ 384 (427)
+|||++++++
T Consensus 247 ~Rp~~~~l~~ 256 (261)
T cd05068 247 DRPTFETLQW 256 (261)
T ss_pred cCCCHHHHHH
Confidence 9999999874
No 299
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.6e-34 Score=270.74 Aligned_cols=249 Identities=23% Similarity=0.322 Sum_probs=183.3
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
++..+.|.+.+.||+|+||.||.+.. ..+ ..||+|++...... ...+.+|+++++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~---- 72 (262)
T cd05071 2 EIPRESLRLEVKLGQGCFGEVWMGTW-NGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE---- 72 (262)
T ss_pred CCChHHeeEeeecCCCCCCcEEEEEe-cCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC----
Confidence 45667899999999999999997644 333 46999998753322 2457789999999999999999987643
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||++
T Consensus 73 ---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~ 149 (262)
T cd05071 73 ---EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 149 (262)
T ss_pred ---CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCce
Confidence 2357888887 6799988864 34789999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+........ ...+..++..|+||
T Consensus 150 ~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~~P 172 (262)
T cd05071 150 RLIEDNEYT---------------------------------------------------------ARQGAKFPIKWTAP 172 (262)
T ss_pred eeccccccc---------------------------------------------------------cccCCcccceecCH
Confidence 643221100 00012245668888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+..+...+|+||+|++++.+.+ +..+|................+. ......+..+.+||.+||+.||+
T Consensus 173 E~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~ 245 (262)
T cd05071 173 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-------PCPPECPESLHDLMCQCWRKEPE 245 (262)
T ss_pred hHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC-------CCccccCHHHHHHHHHHccCCcc
Confidence 88777667778899999999987754 33333222111111111111110 01124577899999999999999
Q ss_pred CCCCHHHHhc
Q psy8260 375 KRITAEQALA 384 (427)
Q Consensus 375 ~R~ta~e~L~ 384 (427)
+|||++++++
T Consensus 246 ~Rp~~~~~~~ 255 (262)
T cd05071 246 ERPTFEYLQA 255 (262)
T ss_pred cCCCHHHHHH
Confidence 9999999864
No 300
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.8e-34 Score=268.90 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=182.6
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..|.+.+.+|+|+||.||.+.. ..+..||||.+..... ....+.+|+.++++++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~--~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 72 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ------R 72 (256)
T ss_pred HHeEEeeEecCcccceEEEEEe--cCCCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEccC------C
Confidence 4678889999999999997643 2345699998864322 234578899999999999999999987543 3
Q ss_pred eEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
.+++++|++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++....
T Consensus 73 ~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~ 152 (256)
T cd05113 73 PIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLD 152 (256)
T ss_pred CcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCC
Confidence 468888887 6789988864 3589999999999999999999999999999999999999999999999998764321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.... ...+..++..|+|||++.+
T Consensus 153 ~~~~---------------------------------------------------------~~~~~~~~~~y~~pe~~~~ 175 (256)
T cd05113 153 DEYT---------------------------------------------------------SSVGSKFPVRWSPPEVLLY 175 (256)
T ss_pred Ccee---------------------------------------------------------ecCCCccChhhCCHHHHhc
Confidence 1000 0012235567888888877
Q ss_pred ccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
..+..++|+||+|++++.+-+ +..+|................... .....++.+++++.+||+.||.+|||+
T Consensus 176 ~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~li~~cl~~~p~~Rp~~ 248 (256)
T cd05113 176 SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY-------RPHLASEKVYAIMYSCWHEKAEERPTF 248 (256)
T ss_pred CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC-------CCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence 677778899999999987644 433332211111111121111110 112357889999999999999999999
Q ss_pred HHHhcC
Q psy8260 380 EQALAH 385 (427)
Q Consensus 380 ~e~L~H 385 (427)
.+++++
T Consensus 249 ~~ll~~ 254 (256)
T cd05113 249 QQLLSS 254 (256)
T ss_pred HHHHHh
Confidence 999875
No 301
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.1e-34 Score=273.84 Aligned_cols=252 Identities=20% Similarity=0.278 Sum_probs=185.1
Q ss_pred CcceeeccccCcccccEEEEeEEe----CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALD----SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~----~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
.+.|.+.+.||+|+||.||.+... ..++..||+|.+... .....+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 79 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGDG-- 79 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc--cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC--
Confidence 456888899999999999976542 245677999988543 233345677999999999999999999987643
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeE
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQ-----------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIA 200 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~-----------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NIL 200 (427)
...+++++++ +++|.+++... .+++..+..++.|++.||.|||++||+||||||+|||
T Consensus 80 ----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 155 (291)
T cd05094 80 ----DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL 155 (291)
T ss_pred ----CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEE
Confidence 3468888887 78999988542 3788999999999999999999999999999999999
Q ss_pred EcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCc
Q psy8260 201 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTE 280 (427)
Q Consensus 201 l~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~ 280 (427)
++.++.+||+|||+++.........
T Consensus 156 ~~~~~~~~l~dfg~a~~~~~~~~~~------------------------------------------------------- 180 (291)
T cd05094 156 VGANLLVKIGDFGMSRDVYSTDYYR------------------------------------------------------- 180 (291)
T ss_pred EccCCcEEECCCCcccccCCCceee-------------------------------------------------------
Confidence 9999999999999986432110000
Q ss_pred cccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 281 NEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 281 ~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
......+++.|+|||++.+..+..++|+||+|++++.|-+ +..+|.......... .... .... ......+.
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~~-~~~~-----~~~~~~~~ 252 (291)
T cd05094 181 -VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE-CITQ-GRVL-----ERPRVCPK 252 (291)
T ss_pred -cCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHhC-CCCC-----CCCccCCH
Confidence 0011235677888888877777778999999999987654 444443221111111 1111 1110 11223567
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
++.+||.+||+.||.+|||++++++.
T Consensus 253 ~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 253 EVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHH
Confidence 89999999999999999999998753
No 302
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-34 Score=275.71 Aligned_cols=260 Identities=21% Similarity=0.316 Sum_probs=186.6
Q ss_pred eeeccccCcccccEEEEeEEe--CcCCcEEEEEEccCcCC--CHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcccc
Q psy8260 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQ--SAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~--~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~ 140 (427)
|.+.+.||.|+||.||.+... ..+|..||+|++..... .....+.+.+|+++++++ +|+||+++++.|..+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~---- 77 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD---- 77 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC----
Confidence 567889999999999975432 24789999999864322 122335567899999999 689999999887653
Q ss_pred CCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
..+|++++++ +++|.+.+.. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+++..
T Consensus 78 --~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 78 --TKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred --CeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 4578888888 6788887754 56899999999999999999999999999999999999999999999999998653
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
...... ......|+..|+|||++
T Consensus 156 ~~~~~~---------------------------------------------------------~~~~~~~~~~y~aPE~~ 178 (290)
T cd05613 156 HEDEVE---------------------------------------------------------RAYSFCGTIEYMAPDIV 178 (290)
T ss_pred cccccc---------------------------------------------------------ccccccCCcccCChhhc
Confidence 221000 00112355566666665
Q ss_pred hhc--cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 299 LNW--MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 299 ~~~--~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
... .+....|+|++|++++.+.++..++.................... . ......++.+.+||.+||+.||++|
T Consensus 179 ~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~ll~~~l~~~p~~R 254 (290)
T cd05613 179 RGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-P---PYPQEMSALAKDIIQRLLMKDPKKR 254 (290)
T ss_pred cCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC-C---CCCccCCHHHHHHHHHHhcCCHHHh
Confidence 432 244567999999999888666555432111111111111110000 0 1123467889999999999999999
Q ss_pred C-----CHHHHhcCCCCCCCC
Q psy8260 377 I-----TAEQALAHPYLSQYS 392 (427)
Q Consensus 377 ~-----ta~e~L~Hp~f~~~~ 392 (427)
+ +++++++||||....
T Consensus 255 ~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 255 LGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred cCCCCCCHHHHHcCcccccCC
Confidence 7 899999999998764
No 303
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.4e-34 Score=268.73 Aligned_cols=249 Identities=22% Similarity=0.319 Sum_probs=188.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|++.+.+|.|+||.||.+ .+..+++.+|+|.+............+.+|+++++.++|+||+++++++... ...
T Consensus 2 y~~~~~i~~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~ 74 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKV-KRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG------NKL 74 (256)
T ss_pred ceEeeeecCCCceeEEEE-EECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC------CEE
Confidence 667788999999999965 4667899999999876544445556677999999999999999999887643 457
Q ss_pred EEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
|++++++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++....
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~ 154 (256)
T cd08530 75 CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLK 154 (256)
T ss_pred EEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhc
Confidence 8888887 7799888754 468999999999999999999999999999999999999999999999999886432
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... ....|++.|+|||.+.
T Consensus 155 ~~~~------------------------------------------------------------~~~~~~~~~~~Pe~~~ 174 (256)
T cd08530 155 KNMA------------------------------------------------------------KTQIGTPHYMAPEVWK 174 (256)
T ss_pred cCCc------------------------------------------------------------ccccCCccccCHHHHC
Confidence 2100 0123556677777776
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
+..+...+|+|++|++++.+.++..+|..... ........ ..... ......+.+++++|.+||+.||.+|||+
T Consensus 175 ~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~-~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 247 (256)
T cd08530 175 GRPYSYKSDIWSLGCLLYEMATFAPPFEARSM-QDLRYKVQ-RGKYP-----PIPPIYSQDLQNFIRSMLQVKPKLRPNC 247 (256)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHh-cCCCC-----CCchhhCHHHHHHHHHHcCCCcccCCCH
Confidence 66666678999999999877555544432211 11111111 11111 1112457889999999999999999999
Q ss_pred HHHhcCCCC
Q psy8260 380 EQALAHPYL 388 (427)
Q Consensus 380 ~e~L~Hp~f 388 (427)
.|+++||++
T Consensus 248 ~~~l~~p~~ 256 (256)
T cd08530 248 DKILASPAV 256 (256)
T ss_pred HHHhcCCCC
Confidence 999999985
No 304
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.8e-34 Score=275.61 Aligned_cols=248 Identities=18% Similarity=0.252 Sum_probs=180.2
Q ss_pred cceeeccccCcccccEEEEeEEeCcCC--cEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcccc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g--~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~ 140 (427)
+.|.+.+.||+|+||.||.+.. ..++ ..+|+|.+... ......+.+.+|+++++++ +||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~---- 75 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMI-KKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENR---- 75 (297)
T ss_pred ccceeeeeecCCCcceEEEEEe-cCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC----
Confidence 3578889999999999997654 3344 35788887632 2334456678999999999 799999999987643
Q ss_pred CCceEEEEeccC-CCCHHHHHhhC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRTQ-----------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~~-----------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~ 202 (427)
...|++++++ +++|.+++... .+++..+..++.|++.||+|||++||+||||||+|||++
T Consensus 76 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~ 153 (297)
T cd05089 76 --GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG 153 (297)
T ss_pred --CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC
Confidence 3467888877 68999888542 378889999999999999999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccc
Q psy8260 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE 282 (427)
Q Consensus 203 ~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~ 282 (427)
.++.+||+|||++..........
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~--------------------------------------------------------- 176 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYVKKT--------------------------------------------------------- 176 (297)
T ss_pred CCCeEEECCcCCCccccceeccC---------------------------------------------------------
Confidence 99999999999875321100000
Q ss_pred cccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhH
Q psy8260 283 MTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQA 361 (427)
Q Consensus 283 ~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 361 (427)
....+..|+|||++.+..+..++|+||+|++++.|-+ +..+|..........+...... .......++++
T Consensus 177 --~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 247 (297)
T cd05089 177 --MGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-------MEKPRNCDDEV 247 (297)
T ss_pred --CCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC-------CCCCCCCCHHH
Confidence 0012345788887776667778899999999987743 4444432221111111111100 01123467899
Q ss_pred HHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 362 IDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 362 ~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
.+||.+||+.||.+|||++|+++.
T Consensus 248 ~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 248 YELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999999999765
No 305
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=5.5e-34 Score=271.56 Aligned_cols=255 Identities=19% Similarity=0.287 Sum_probs=185.2
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCc----CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecC
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSV----SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSN 136 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~----~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~ 136 (427)
+....|.+.+.||+|+||.||.+..... +++.||+|.+... ........+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 3446688899999999999997655321 6788999987543 2233345678999999999999999999987543
Q ss_pred ccccCCceEEEEeccC-CCCHHHHHhhC--------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC--
Q psy8260 137 TCLADFKNVYMVTHLM-GADLNNILRTQ--------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-- 205 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~-g~~L~~~l~~~--------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~-- 205 (427)
...+++++++ +++|.+++... .+++..+..++.||+.||.|||+++++||||||+|||++.++
T Consensus 82 ------~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~ 155 (277)
T cd05036 82 ------LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPG 155 (277)
T ss_pred ------CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCC
Confidence 3457888877 78999988643 478899999999999999999999999999999999998654
Q ss_pred -CEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccc
Q psy8260 206 -ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMT 284 (427)
Q Consensus 206 -~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~ 284 (427)
.+||+|||+++......... ...
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~--------------------------------------------------------~~~ 179 (277)
T cd05036 156 RVAKIADFGMARDIYRASYYR--------------------------------------------------------KGG 179 (277)
T ss_pred cceEeccCccccccCCcccee--------------------------------------------------------cCC
Confidence 59999999987542110000 000
Q ss_pred cccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHH
Q psy8260 285 GYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAID 363 (427)
Q Consensus 285 ~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d 363 (427)
....++.|+|||++.+..+..++|+||+|++++.+.+ +..+|..... ....+........ ......++++.+
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~ 252 (277)
T cd05036 180 RAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN-QEVMEFVTGGGRL------DPPKGCPGPVYR 252 (277)
T ss_pred CCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcC------CCCCCCCHHHHH
Confidence 1122456888998877778888999999999987543 3333332211 1111222111111 112345788999
Q ss_pred HHHHhcCCCCCCCCCHHHHhcC
Q psy8260 364 LLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 364 Li~~mL~~dP~~R~ta~e~L~H 385 (427)
+|.+||+.||++|||+.++++|
T Consensus 253 ~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 253 IMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999999999999987
No 306
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.7e-34 Score=276.56 Aligned_cols=257 Identities=22% Similarity=0.299 Sum_probs=188.3
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC-CCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF-QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
....|...+.+|.|+||.||.+. +..++..||+|.+.... .......++.+|+++++.++|+|++++++++...
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 87 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFAR-DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE---- 87 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEE-EcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC----
Confidence 34456777889999999999754 56688999999886432 2333445677899999999999999999987653
Q ss_pred CCceEEEEeccCCCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
...+++++++.+++.+++. ...+++..+..++.|++.||.|||+++++||||||+|||++.++.+||+|||++...
T Consensus 88 --~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 165 (308)
T cd06634 88 --HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165 (308)
T ss_pred --CeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceee
Confidence 4578999998888877664 345899999999999999999999999999999999999999999999999987643
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
... ....++ +.|+|||++
T Consensus 166 ~~~-~~~~~~-------------------------------------------------------------~~y~aPE~~ 183 (308)
T cd06634 166 APA-NXFVGT-------------------------------------------------------------PYWMAPEVI 183 (308)
T ss_pred cCc-ccccCC-------------------------------------------------------------ccccCHHHH
Confidence 221 122334 445555554
Q ss_pred hh---ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc-CCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 299 LN---WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS-LPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 299 ~~---~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
.+ .....++|+||+|++++.+-++..++............... .+... ....+..+.+||.+||+.||.
T Consensus 184 ~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~li~~cl~~~P~ 256 (308)
T cd06634 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ-------SGHWSEYFRNFVDSCLQKIPQ 256 (308)
T ss_pred hhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcC-------cccccHHHHHHHHHHhhCCcc
Confidence 31 22445679999999998885555444322111111111111 11110 124577899999999999999
Q ss_pred CCCCHHHHhcCCCCCCCCCC
Q psy8260 375 KRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f~~~~~~ 394 (427)
+|||++++++|||+.....+
T Consensus 257 ~Rp~~~~ll~~~~~~~~~~~ 276 (308)
T cd06634 257 DRPTSEVLLKHRFVLRERPP 276 (308)
T ss_pred cCCCHHHHhhCccccccCCh
Confidence 99999999999999875443
No 307
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-34 Score=273.50 Aligned_cols=256 Identities=20% Similarity=0.232 Sum_probs=183.9
Q ss_pred eeccccCcccccEEEEeEE---eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 67 DIGPTLSKESFDLIFSSAL---DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 67 ~~~~~lg~g~fg~v~~~~~---~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.+.+.||+|+||.||.... ...++..||+|.+.... .......+.+|+++++.++||||+++++++... ...
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~ 81 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ----GGK 81 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC----CCc
Confidence 6778999999999986543 34578899999886542 233455677999999999999999999886532 123
Q ss_pred eEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 144 NVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
.++++++++ +++|.+++....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 161 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 161 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence 578888877 6899999888889999999999999999999999999999999999999999999999999987543211
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
... . ......++..|+|||++.+..
T Consensus 162 ~~~------~-------------------------------------------------~~~~~~~~~~~~~PE~~~~~~ 186 (283)
T cd05080 162 EYY------R-------------------------------------------------VREDGDSPVFWYAVECLKENK 186 (283)
T ss_pred hhh------c-------------------------------------------------cCCCCCCCceeeCHhHhcccC
Confidence 000 0 000112455688888887777
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc-CCCCCcccH---------HhhcCCCChhHHHHHHHhcCCC
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS-LPLLTKKDF---------RQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~s~~~~dLi~~mL~~d 372 (427)
+..++|+||+|++++.|.++..|+..... ........ ........+ .......+.++.+|+.+||+.|
T Consensus 187 ~~~~~Di~slG~~l~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 264 (283)
T cd05080 187 FSYASDVWSFGVTLYELLTHCDSKQSPPK--KFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETE 264 (283)
T ss_pred CCcccccHHHHHHHHHHHhCCCCCCCCcc--hhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccC
Confidence 77788999999999888554333211100 00000000 000000000 0012335678999999999999
Q ss_pred CCCCCCHHHHhc
Q psy8260 373 SEKRITAEQALA 384 (427)
Q Consensus 373 P~~R~ta~e~L~ 384 (427)
|++|||++++++
T Consensus 265 p~~Rps~~~i~~ 276 (283)
T cd05080 265 AKFRPTFRSLIP 276 (283)
T ss_pred hhhCCCHHHHHH
Confidence 999999999985
No 308
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-34 Score=276.86 Aligned_cols=257 Identities=22% Similarity=0.294 Sum_probs=187.3
Q ss_pred ccccCcceeeccccCcccccEEEEeEEeC------cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeee
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALDS------VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLD 131 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~------~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~ 131 (427)
+++..+.|.+++.||+|+||.||.+.... .++..||+|.+... ........+.+|+.+++.+ +||||+++++
T Consensus 13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (307)
T cd05098 13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLG 91 (307)
T ss_pred ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC-CChHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 35666789999999999999999764321 23467999988653 2334456678899999999 7999999999
Q ss_pred eeecCccccCCceEEEEeccC-CCCHHHHHhhC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q psy8260 132 VFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ-----------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRD 193 (427)
Q Consensus 132 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~-----------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrD 193 (427)
++... ...|++++++ +++|.+++... .+++..+..++.|++.||+|||++|++|||
T Consensus 92 ~~~~~------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~d 165 (307)
T cd05098 92 ACTQD------GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRD 165 (307)
T ss_pred EEecC------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 87653 3578888888 67999888642 378888999999999999999999999999
Q ss_pred CCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhcc
Q psy8260 194 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDF 273 (427)
Q Consensus 194 LKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~ 273 (427)
|||+|||++.++.+||+|||+++.........
T Consensus 166 lkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~------------------------------------------------ 197 (307)
T cd05098 166 LAARNVLVTEDNVMKIADFGLARDIHHIDYYK------------------------------------------------ 197 (307)
T ss_pred ccHHheEEcCCCcEEECCCcccccccccchhh------------------------------------------------
Confidence 99999999999999999999886432110000
Q ss_pred CCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHh
Q psy8260 274 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQ 352 (427)
Q Consensus 274 g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (427)
......+++.|+|||++.+..+...+|+||+|++++.|.+ +..++... ............... .
T Consensus 198 --------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~------~ 262 (307)
T cd05098 198 --------KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRM------D 262 (307)
T ss_pred --------ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CHHHHHHHHHcCCCC------C
Confidence 0001123467888888877777778899999999987743 32233221 111222222111110 1
Q ss_pred hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 353 VFKGANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 353 ~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
.....+.++.+||.+||..||.+|||+.|++++
T Consensus 263 ~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 263 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 123457899999999999999999999999865
No 309
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.9e-34 Score=267.84 Aligned_cols=257 Identities=26% Similarity=0.372 Sum_probs=193.1
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.+|+|++|.||.+ .+..+++.|++|++............+.+|+.++++++||||+++++.+.... ....
T Consensus 2 ~~~~~~i~~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~ 76 (260)
T cd06606 2 WTRGELLGRGSFGSVYLA-LDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE----KNTL 76 (260)
T ss_pred ceeeeEeeecCceEEEEE-EECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC----CCeE
Confidence 566788999999999965 45568999999998765444455667789999999999999999998876531 1457
Q ss_pred EEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 146 YMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
+++++++ +++|.+++... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||.+........
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 77 NIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 8888888 78999988654 789999999999999999999999999999999999999999999999998764432210
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
. .......++..|+|||.+.....
T Consensus 157 ~--------------------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~ 180 (260)
T cd06606 157 G--------------------------------------------------------EGTGSVRGTPYWMAPEVIRGEEY 180 (260)
T ss_pred c--------------------------------------------------------ccccCCCCCccccCHhhhcCCCC
Confidence 0 00112245667778887766666
Q ss_pred CCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHh
Q psy8260 304 YNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQAL 383 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L 383 (427)
..++|+|++|++++.+.++..+|..... .......... ...........++++.+||.+||+.||.+|||+.|++
T Consensus 181 ~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll 255 (260)
T cd06606 181 GRAADIWSLGCTVIEMATGKPPWSELGN--PMAALYKIGS---SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELL 255 (260)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHHhccc---cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHh
Confidence 7778999999999877555444432211 1111111000 0111122334578999999999999999999999999
Q ss_pred cCCCC
Q psy8260 384 AHPYL 388 (427)
Q Consensus 384 ~Hp~f 388 (427)
+||||
T Consensus 256 ~~~~~ 260 (260)
T cd06606 256 QHPFL 260 (260)
T ss_pred hCCCC
Confidence 99997
No 310
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.6e-34 Score=274.80 Aligned_cols=257 Identities=19% Similarity=0.234 Sum_probs=181.2
Q ss_pred cCcceeeccccCcccccEEEEeEE---------------eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSAL---------------DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENV 126 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~---------------~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnI 126 (427)
..++|.+.+.||+|+||.||.+.. ...++..||+|.+... ........+.+|+++++.++|+||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCc
Confidence 456789999999999999996531 1223457999988643 233445667899999999999999
Q ss_pred eeeeeeeecCccccCCceEEEEeccC-CCCHHHHHhhC------------CCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q psy8260 127 IGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRD 193 (427)
Q Consensus 127 v~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrD 193 (427)
+++++++... ...+++++++ +++|.+++... .+++..+..++.|++.||+|||++|++|||
T Consensus 82 ~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 155 (296)
T cd05095 82 IRLLAVCITS------DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD 155 (296)
T ss_pred ceEEEEEecC------CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 9999988654 3468888877 68999887542 256778999999999999999999999999
Q ss_pred CCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhcc
Q psy8260 194 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDF 273 (427)
Q Consensus 194 LKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~ 273 (427)
|||+|||++.++.+||+|||+++.........
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~------------------------------------------------ 187 (296)
T cd05095 156 LATRNCLVGKNYTIKIADFGMSRNLYSGDYYR------------------------------------------------ 187 (296)
T ss_pred CChheEEEcCCCCEEeccCcccccccCCccee------------------------------------------------
Confidence 99999999999999999999986432210000
Q ss_pred CCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC--CCHHHHhhcCcHHHHH---HHhcCCCCCcc
Q psy8260 274 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT--PPAEFMAKISSDSARK---YINSLPLLTKK 348 (427)
Q Consensus 274 g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 348 (427)
......+++.|+|||+..+..+..++|+||+|++++.+-+ +..++......+.... +...... .
T Consensus 188 --------~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~- 256 (296)
T cd05095 188 --------IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGR--Q- 256 (296)
T ss_pred --------ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccc--c-
Confidence 0001123566888888776667778899999999987632 3333322111111111 1100000 0
Q ss_pred cHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 349 DFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 349 ~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
.........++.+.+||.+||+.||.+|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 257 VYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 000111234678899999999999999999999864
No 311
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.1e-34 Score=271.23 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=183.9
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC-CHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ-SAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
+.|.+.+.||.|+||.||.+ .+..+|..||||.+..... .......+.+|+.+++.++||||+++++++...
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~-~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 74 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRA-TCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED------ 74 (267)
T ss_pred chhhhhhhhcccCCeEEEEE-eecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC------
Confidence 35778899999999999965 4566899999998764322 233445677999999999999999999887643
Q ss_pred ceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
...+++++++ +++|.++++. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 4577888877 6789887752 458999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
....... ...+..|++.|+|||
T Consensus 155 ~~~~~~~----------------------------------------------------------~~~~~~~~~~~~ape 176 (267)
T cd08229 155 FFSSKTT----------------------------------------------------------AAHSLVGTPYYMSPE 176 (267)
T ss_pred ccccCCc----------------------------------------------------------ccccccCCcCccCHH
Confidence 4322110 001223566777777
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
++.+..+...+|+||+|++++.+.++..||...... ....+..... ..... .....++++.+||.+||+.||.+
T Consensus 177 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~li~~~l~~~p~~ 251 (267)
T cd08229 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-DYPPL----PSDHYSEELRQLVNMCINPDPEK 251 (267)
T ss_pred HhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC-CCCCC----CcccccHHHHHHHHHhcCCCccc
Confidence 776666666789999999998886655555322111 0111111100 00000 11235778999999999999999
Q ss_pred CCCHHHHhc
Q psy8260 376 RITAEQALA 384 (427)
Q Consensus 376 R~ta~e~L~ 384 (427)
|||+.++++
T Consensus 252 Rpt~~~i~~ 260 (267)
T cd08229 252 RPDITYVYD 260 (267)
T ss_pred CCCHHHHHH
Confidence 999997764
No 312
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.8e-34 Score=269.17 Aligned_cols=249 Identities=23% Similarity=0.294 Sum_probs=183.0
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
++...+|.+.+.+|+|+||.||.+.. ..+..||+|.+...... ...+.+|+.++++++|+||+++++++..
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~--~~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~---- 72 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTW--NGNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE---- 72 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEe--cCCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC----
Confidence 45566788999999999999997643 35677999988654332 2457799999999999999999987642
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...|++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus 73 ---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~ 149 (260)
T cd05070 73 ---EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLA 149 (260)
T ss_pred ---CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceee
Confidence 2357888877 6799988864 34899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
......... ...+..++..|+||
T Consensus 150 ~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~aP 172 (260)
T cd05070 150 RLIEDNEYT---------------------------------------------------------ARQGAKFPIKWTAP 172 (260)
T ss_pred eeccCcccc---------------------------------------------------------cccCCCCCccccCh
Confidence 643211000 00111244568888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+..+...+|+||+|++++.+.+ +..+|......+...... ..... ......+.++.+||.+||+.||.
T Consensus 173 E~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~li~~~l~~~p~ 245 (260)
T cd05070 173 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE-RGYRM------PCPQDCPISLHELMLQCWKKDPE 245 (260)
T ss_pred HHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCC------CCCCcCCHHHHHHHHHHcccCcc
Confidence 88776667778899999999987744 333343221111122111 11111 11234678899999999999999
Q ss_pred CCCCHHHHhc
Q psy8260 375 KRITAEQALA 384 (427)
Q Consensus 375 ~R~ta~e~L~ 384 (427)
+|||++++.+
T Consensus 246 ~Rpt~~~l~~ 255 (260)
T cd05070 246 ERPTFEYLQS 255 (260)
T ss_pred cCcCHHHHHH
Confidence 9999999863
No 313
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.1e-34 Score=275.17 Aligned_cols=260 Identities=21% Similarity=0.327 Sum_probs=187.2
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTC 138 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~ 138 (427)
.+..+.|++.+.+|.|+||.||.+ .+..+++.||||.+..... ........+|+.++.+. +||||+++++++...
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~-~~~~~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-- 86 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKM-RFKKTGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFITD-- 86 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEE-EECCCCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeeecC--
Confidence 344567888999999999999965 4556799999999865432 22344566777766666 599999999987653
Q ss_pred ccCCceEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 139 LADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 139 ~~~~~~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...|++++++++++.++... ..+++..+..++.|++.||.|||+ .||+||||||+||+++.++.+||+|||++
T Consensus 87 ----~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~ 162 (296)
T cd06618 87 ----SDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGIS 162 (296)
T ss_pred ----CeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccc
Confidence 46899999998888877654 468999999999999999999997 59999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
......... ....+++.|+||
T Consensus 163 ~~~~~~~~~-----------------------------------------------------------~~~~~~~~y~aP 183 (296)
T cd06618 163 GRLVDSKAK-----------------------------------------------------------TRSAGCAAYMAP 183 (296)
T ss_pred hhccCCCcc-----------------------------------------------------------cCCCCCccccCH
Confidence 643221100 011234455555
Q ss_pred HHhhhcc----CCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHHHhcC-CCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 296 EIMLNWM----HYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKYINSL-PLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 296 Evl~~~~----~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
|++.+.. +..++|+||+|++++.+-++..+|...... +......... +... .....++++.+||.+||
T Consensus 184 E~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l 257 (296)
T cd06618 184 ERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLP------PNEGFSPDFCSFVDLCL 257 (296)
T ss_pred hhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCC------CCCCCCHHHHHHHHHHc
Confidence 5554332 455789999999998886655555321111 1111111111 1111 01135778999999999
Q ss_pred CCCCCCCCCHHHHhcCCCCCCCC
Q psy8260 370 ELDSEKRITAEQALAHPYLSQYS 392 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~Hp~f~~~~ 392 (427)
..||.+|||++++++||||....
T Consensus 258 ~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 258 TKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred cCChhhCCCHHHHhcChhhhccc
Confidence 99999999999999999998653
No 314
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.6e-34 Score=264.11 Aligned_cols=248 Identities=27% Similarity=0.452 Sum_probs=184.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.+.+.+|.|++|.||.+ .+..++..||+|++..... .....+.+|+.+++.++|+||+++++++... ...
T Consensus 2 y~~~~~l~~g~~~~v~~~-~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~ 72 (253)
T cd05122 2 FEILEKIGKGGFGEVYKA-RHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKK------DEL 72 (253)
T ss_pred ceeeeeeccCCceEEEEE-EECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC------CeE
Confidence 567788999999999965 4556889999999865432 3456678999999999999999999988654 356
Q ss_pred EEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 146 YMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
+++++++ +++|.+++... .+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+.......
T Consensus 73 ~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 73 WIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 7888887 58999988664 78999999999999999999999999999999999999999999999999886543221
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. .....|+..|+|||++.+..
T Consensus 153 ~-----------------------------------------------------------~~~~~~~~~~~~PE~~~~~~ 173 (253)
T cd05122 153 A-----------------------------------------------------------RNTMVGTPYWMAPEVINGKP 173 (253)
T ss_pred c-----------------------------------------------------------ccceecCCcccCHHHHcCCC
Confidence 0 00123455566666665555
Q ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhc-CCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHH
Q psy8260 303 HYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINS-LPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQ 381 (427)
Q Consensus 303 ~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e 381 (427)
...++|+|++|++++.+.++..++............... .+.... ....+.++.++|.+||+.||++|||+.|
T Consensus 174 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~l~~~p~~R~t~~~ 247 (253)
T cd05122 174 YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRN------PEKWSDEFKDFLKKCLQKNPEKRPTAEQ 247 (253)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCc------ccccCHHHHHHHHHHccCChhhCCCHHH
Confidence 556789999999998776555444322111111111110 011100 0113678999999999999999999999
Q ss_pred HhcCCC
Q psy8260 382 ALAHPY 387 (427)
Q Consensus 382 ~L~Hp~ 387 (427)
+|+|||
T Consensus 248 ~l~~~~ 253 (253)
T cd05122 248 LLKHPF 253 (253)
T ss_pred HhcCCC
Confidence 999999
No 315
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1e-33 Score=268.56 Aligned_cols=257 Identities=19% Similarity=0.221 Sum_probs=182.7
Q ss_pred eeeccccCcccccEEEEeEEe--CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 66 IDIGPTLSKESFDLIFSSALD--SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~--~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
|.+.+.||+|+||.||.+... ..+++.||||.+..........+++.+|+++++.++||||+++++++..........
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456789999999999987653 346789999998765555556677889999999999999999999875432111112
Q ss_pred eEEEEeccC-CCCHHHHHhh-------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT-------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~-------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
..+++++++ +++|..++.. ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 235666665 7888876532 14788899999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+......... ......+++.|++|
T Consensus 161 ~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~p 184 (273)
T cd05074 161 KKIYSGDYYR--------------------------------------------------------QGCASKLPVKWLAL 184 (273)
T ss_pred ccccCCccee--------------------------------------------------------cCCCccCchhhcCH
Confidence 7532211000 00011234568888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|.+.+..+...+|+||+|++++.+-+ +..++... ................ .....++.+.+++.+||..||+
T Consensus 185 e~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~l~~~p~ 257 (273)
T cd05074 185 ESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV-ENSEIYNYLIKGNRLK------QPPDCLEDVYELMCQCWSPEPK 257 (273)
T ss_pred hHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC-CHHHHHHHHHcCCcCC------CCCCCCHHHHHHHHHHcCCChh
Confidence 88877777778899999999987633 22223211 1111222221111100 1123567899999999999999
Q ss_pred CCCCHHHHhcC
Q psy8260 375 KRITAEQALAH 385 (427)
Q Consensus 375 ~R~ta~e~L~H 385 (427)
+|||+.|++++
T Consensus 258 ~Rps~~~~~~~ 268 (273)
T cd05074 258 CRPSFQHLRDQ 268 (273)
T ss_pred hCcCHHHHHHH
Confidence 99999999864
No 316
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=8e-34 Score=266.52 Aligned_cols=246 Identities=24% Similarity=0.349 Sum_probs=183.2
Q ss_pred cccCcccccEEEEeEEeC--cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDS--VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~--~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||.+.... .++..||+|.+....... ....+.+|+++++.++|+||+++++++... ..+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~~~l 73 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEE------EPLYL 73 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCC------CceEE
Confidence 368999999999765432 237899999987654333 456778999999999999999999987652 45789
Q ss_pred EeccC-CCCHHHHHhh----------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 148 VTHLM-GADLNNILRT----------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~----------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
+++++ +++|.+++.. ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||.++
T Consensus 74 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~ 153 (262)
T cd00192 74 VLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSR 153 (262)
T ss_pred EEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccc
Confidence 99988 8999998865 468999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
........ .......+++.|+|||
T Consensus 154 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE 177 (262)
T cd00192 154 DVYDDDYY--------------------------------------------------------RKKTGGKLPIRWMAPE 177 (262)
T ss_pred cccccccc--------------------------------------------------------ccccCCCcCccccCHH
Confidence 54321100 0011234567788888
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
++....+...+|+||+|++++.+.+ +..+|.... ............. .......++++.++|.+||+.||.+
T Consensus 178 ~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~ 250 (262)
T cd00192 178 SLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-NEEVLEYLRKGYR------LPKPEYCPDELYELMLSCWQLDPED 250 (262)
T ss_pred HhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCC------CCCCccCChHHHHHHHHHccCCccc
Confidence 8776667778899999999987633 233332221 1111111111100 0112345789999999999999999
Q ss_pred CCCHHHHhcC
Q psy8260 376 RITAEQALAH 385 (427)
Q Consensus 376 R~ta~e~L~H 385 (427)
|||++|+++|
T Consensus 251 Rps~~~l~~~ 260 (262)
T cd00192 251 RPTFSELVER 260 (262)
T ss_pred CcCHHHHHHh
Confidence 9999999976
No 317
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.3e-33 Score=267.39 Aligned_cols=253 Identities=22% Similarity=0.291 Sum_probs=186.4
Q ss_pred CcceeeccccCcccccEEEEeEEeCc--CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSV--SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~--~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
.++|++.+.||+|+||.||.+..... .+..||+|.+.... .......+.+|+.++++++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS---- 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC----
Confidence 35688899999999999998754322 33479999886543 334456778999999999999999999988643
Q ss_pred CCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
...|+++|++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+++.
T Consensus 78 --~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 78 --KPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred --CccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 3578888888 6799998865 3589999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
......... ...+..+++.|+|||+
T Consensus 156 ~~~~~~~~~-------------------------------------------------------~~~~~~~~~~y~~pe~ 180 (267)
T cd05066 156 LEDDPEAAY-------------------------------------------------------TTRGGKIPIRWTAPEA 180 (267)
T ss_pred cccccceee-------------------------------------------------------ecCCCccceeecCHhH
Confidence 432110000 0011123567889998
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
+.+..+..++|+|++|++++.+.+ +..+|......+...... ..... ......++.+.+|+.+||+.||.+|
T Consensus 181 ~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~li~~~l~~~p~~R 253 (267)
T cd05066 181 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE-EGYRL------PAPMDCPAALHQLMLDCWQKDRNER 253 (267)
T ss_pred hccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh-CCCcC------CCCCCCCHHHHHHHHHHcccCchhC
Confidence 887777788899999999987433 444443322122111111 11000 1123457789999999999999999
Q ss_pred CCHHHHhc
Q psy8260 377 ITAEQALA 384 (427)
Q Consensus 377 ~ta~e~L~ 384 (427)
||+.++++
T Consensus 254 p~~~~i~~ 261 (267)
T cd05066 254 PKFEQIVS 261 (267)
T ss_pred CCHHHHHH
Confidence 99999875
No 318
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.1e-33 Score=266.24 Aligned_cols=245 Identities=18% Similarity=0.217 Sum_probs=179.8
Q ss_pred cccCcccccEEEEeEEeCcC--CcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVS--GVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~--g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||++.....+ +..||+|.+...... ...+.+.+|+++++.++|||||++++++.. ...++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~ 72 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG-------EPLML 72 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-------CceEE
Confidence 46899999999987654433 378999998754332 345567899999999999999999988643 24678
Q ss_pred EeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+++++ +++|.+++... .+++..+..++.|++.||+|||+++++||||||+|||++.++.+||+|||+++.........
T Consensus 73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 73 VMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred EEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 88876 67999988654 59999999999999999999999999999999999999999999999999986432211000
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
. ...+..++..|+|||++.+..+..
T Consensus 153 ~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ 177 (257)
T cd05060 153 R-------------------------------------------------------ATTAGRWPLKWYAPECINYGKFSS 177 (257)
T ss_pred c-------------------------------------------------------cccCccccccccCHHHhcCCCCCc
Confidence 0 001112455788888887777777
Q ss_pred CCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 306 QTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
.+|+||+|++++.+.+ +..+|.... .....+........ ......++.++|+|.+||..||.+|||+.++++
T Consensus 178 ~~Di~slG~~l~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 178 KSDVWSYGVTLWEAFSYGAKPYGEMK-GAEVIAMLESGERL------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred cchHHHHHHHHHHHHcCCCCCcccCC-HHHHHHHHHcCCcC------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 8999999999876643 333343221 11222222211111 122346788999999999999999999999875
No 319
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.9e-34 Score=274.96 Aligned_cols=256 Identities=23% Similarity=0.299 Sum_probs=185.4
Q ss_pred ccccCcceeeccccCcccccEEEEeEEe------CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeee
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALD------SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLD 131 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~------~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~ 131 (427)
+.+..++|.+++.||+|+||.||.+... ...+..||+|.+... ........+.+|+++++.+ +||||+++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN-ATDKDLADLISEMELMKLIGKHKNIINLLG 85 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC-CChHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence 3566688999999999999999976431 123567999988643 2344456678999999999 6999999999
Q ss_pred eeecCccccCCceEEEEeccC-CCCHHHHHhh-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q psy8260 132 VFHSNTCLADFKNVYMVTHLM-GADLNNILRT-----------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRD 193 (427)
Q Consensus 132 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~-----------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrD 193 (427)
++... ..+|++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+|||
T Consensus 86 ~~~~~------~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~d 159 (314)
T cd05099 86 VCTQE------GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRD 159 (314)
T ss_pred EEccC------CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 87543 3578888887 6899988853 2378888999999999999999999999999
Q ss_pred CCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhcc
Q psy8260 194 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDF 273 (427)
Q Consensus 194 LKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~ 273 (427)
|||+|||++.++.+||+|||+++.........
T Consensus 160 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~------------------------------------------------ 191 (314)
T cd05099 160 LAARNVLVTEDNVMKIADFGLARGVHDIDYYK------------------------------------------------ 191 (314)
T ss_pred ccceeEEEcCCCcEEEcccccccccccccccc------------------------------------------------
Confidence 99999999999999999999987542210000
Q ss_pred CCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHh
Q psy8260 274 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQ 352 (427)
Q Consensus 274 g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (427)
......+++.|+|||++.+..+...+|+||+|++++.+.+ +..+|.... .............. .
T Consensus 192 --------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~------~ 256 (314)
T cd05099 192 --------KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP-VEELFKLLREGHRM------D 256 (314)
T ss_pred --------ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCC------C
Confidence 0001123456888888877777778899999999877643 223332211 11122221111100 1
Q ss_pred hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 353 VFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 353 ~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
.....+.++++||.+||..||++|||+.|+++
T Consensus 257 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 257 KPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 12345678999999999999999999999886
No 320
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.8e-34 Score=267.25 Aligned_cols=247 Identities=21% Similarity=0.277 Sum_probs=182.1
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.++.+.+.+|+|+||.||.+.. .++..+|+|.+...... ...+.+|+++++.++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~--~~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~ 72 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKW--RGKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQ------R 72 (256)
T ss_pred HHcchhhhhccCCCceEEEeEe--cCCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCC------C
Confidence 3577889999999999997643 35678999988643322 23567899999999999999999887543 3
Q ss_pred eEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..|+++|++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...+
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~ 152 (256)
T cd05059 73 PIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLD 152 (256)
T ss_pred ceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccc
Confidence 578888887 7889988854 3589999999999999999999999999999999999999999999999999864322
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.... ...+..++..|+|||++.+
T Consensus 153 ~~~~---------------------------------------------------------~~~~~~~~~~y~~Pe~~~~ 175 (256)
T cd05059 153 DQYT---------------------------------------------------------SSQGTKFPVKWAPPEVFDY 175 (256)
T ss_pred cccc---------------------------------------------------------ccCCCCCCccccCHHHhcc
Confidence 1100 0001123456888888777
Q ss_pred ccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
..+..++|+||+|++++.+-+ +..+|......+.......... . ......++++.+++.+||..||++|||+
T Consensus 176 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~li~~cl~~~p~~Rpt~ 248 (256)
T cd05059 176 SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR-L------YRPKLAPTEVYTIMYSCWHEKPEDRPAF 248 (256)
T ss_pred CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc-C------CCCCCCCHHHHHHHHHHhcCChhhCcCH
Confidence 667778899999999987644 3333322111111111111111 0 1123467899999999999999999999
Q ss_pred HHHhcC
Q psy8260 380 EQALAH 385 (427)
Q Consensus 380 ~e~L~H 385 (427)
+|+++.
T Consensus 249 ~~~l~~ 254 (256)
T cd05059 249 KKLLSQ 254 (256)
T ss_pred HHHHHH
Confidence 999864
No 321
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.5e-34 Score=278.72 Aligned_cols=259 Identities=22% Similarity=0.303 Sum_probs=188.2
Q ss_pred ccccccCcceeeccccCcccccEEEEeEEeC------cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceee
Q psy8260 57 PYSEICRGVIDIGPTLSKESFDLIFSSALDS------VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGL 129 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~------~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l 129 (427)
|.+++....|.+++.||+|+||.||.+.... ..+..||+|.+... ........+.+|+++++++ +||||+++
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 5678888889999999999999999764321 12347999987643 2344456788999999999 89999999
Q ss_pred eeeeecCccccCCceEEEEeccC-CCCHHHHHhhC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCcee
Q psy8260 130 LDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ-----------------KLSDDHVQFLVYQILRGLKYIHSAGIIH 191 (427)
Q Consensus 130 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~-----------------~l~~~~~~~~~~qi~~aL~yLH~~~iiH 191 (427)
++++... ..++++++++ +++|.+++... .++...+..++.|++.||.|||++||+|
T Consensus 84 ~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH 157 (334)
T cd05100 84 LGACTQD------GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIH 157 (334)
T ss_pred eEEEccC------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 9987543 3567888877 67999887532 3677888889999999999999999999
Q ss_pred ccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhh
Q psy8260 192 RDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKIL 271 (427)
Q Consensus 192 rDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~ 271 (427)
|||||+|||++.++.+||+|||+++.........
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~---------------------------------------------- 191 (334)
T cd05100 158 RDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK---------------------------------------------- 191 (334)
T ss_pred cccccceEEEcCCCcEEECCcccceecccccccc----------------------------------------------
Confidence 9999999999999999999999987432210000
Q ss_pred ccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccH
Q psy8260 272 DFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDF 350 (427)
Q Consensus 272 d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (427)
......++..|+|||++.+..+...+|+|++|++++.|-+ +..+|.... .....+........
T Consensus 192 ----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~----- 255 (334)
T cd05100 192 ----------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGHRM----- 255 (334)
T ss_pred ----------cccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCC-----
Confidence 0001123456888888877777788899999999877633 222332211 11111111111100
Q ss_pred HhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 351 RQVFKGANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 351 ~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
......+.++.+||.+||+.||.+|||+.|++++
T Consensus 256 -~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 256 -DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred -CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 1123457789999999999999999999999987
No 322
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8.9e-34 Score=270.63 Aligned_cols=250 Identities=19% Similarity=0.268 Sum_probs=183.3
Q ss_pred cceeeccccCcccccEEEEeEE----eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSAL----DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~----~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
.++.+...||+|+||.||.+.. +..++..||+|.+... .......+.+|+++++.++|+||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEG--- 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC---
Confidence 4567788999999999997643 3346778999987643 334456688999999999999999999987653
Q ss_pred cCCceEEEEeccC-CCCHHHHHhhC----------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRTQ----------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~~----------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~ 202 (427)
...+++++++ +++|.+++... .+++..+..++.|++.||.|||++|++||||||+|||++
T Consensus 80 ---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 ---RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG 156 (280)
T ss_pred ---CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc
Confidence 3467888877 78999887642 378899999999999999999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccc
Q psy8260 203 EDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENE 282 (427)
Q Consensus 203 ~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~ 282 (427)
+++.+||+|||+++........ . .
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~-------------------~-------------------------------------~ 180 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYY-------------------R-------------------------------------V 180 (280)
T ss_pred CCCCEEECCCCceeEcCCCcee-------------------e-------------------------------------c
Confidence 9999999999998643211000 0 0
Q ss_pred cccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhH
Q psy8260 283 MTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQA 361 (427)
Q Consensus 283 ~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 361 (427)
.....+++.|+|||++.+..+..++|+||+|++++.+-+ +..+|......+.........+. ......++.+
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 253 (280)
T cd05092 181 GGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGREL-------ERPRTCPPEV 253 (280)
T ss_pred CCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccC-------CCCCCCCHHH
Confidence 011224567888888877777778899999999887643 33333222111111111111111 1123467889
Q ss_pred HHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 362 IDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 362 ~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
.+||.+||+.||.+|||++|+++
T Consensus 254 ~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 254 YAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999999999999875
No 323
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.3e-33 Score=266.22 Aligned_cols=245 Identities=18% Similarity=0.246 Sum_probs=178.3
Q ss_pred ccCcccccEEEEeEEe-CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEe
Q psy8260 71 TLSKESFDLIFSSALD-SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~-~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~ 149 (427)
.||+|+||.||.+... ..++..||+|.+... ......+.+.+|+.++++++||||+++++++.. ...++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-------~~~~lv~ 73 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE-NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-------EALMLVM 73 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccc-cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-------CCeEEEE
Confidence 3899999999987654 335667999988654 233444567899999999999999999998643 2467888
Q ss_pred ccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccc
Q psy8260 150 HLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 226 (427)
Q Consensus 150 e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 226 (427)
|++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+++..........
T Consensus 74 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 74 EMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred EeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 877 7899988853 4689999999999999999999999999999999999999999999999999864322110000
Q ss_pred ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCC
Q psy8260 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306 (427)
Q Consensus 227 gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~ 306 (427)
......+++.|+|||++....+..+
T Consensus 154 -------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~ 178 (257)
T cd05115 154 -------------------------------------------------------ARSAGKWPLKWYAPECINFRKFSSR 178 (257)
T ss_pred -------------------------------------------------------ccCCCCCCcccCCHHHHccCCCCch
Confidence 0011123567888888877667778
Q ss_pred CCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 307 TDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 307 ~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
+|+||+|++++.+-+ +..||..... ............. ......++++.+||.+|++.||++||+++++.+.
T Consensus 179 ~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 179 SDVWSYGITMWEAFSYGQKPYKKMKG-PEVMSFIEQGKRL------DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred hhHHHHHHHHHHHhcCCCCCcCcCCH-HHHHHHHHCCCCC------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 899999999886532 4444432211 1111111111100 1123457899999999999999999999998753
No 324
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.3e-34 Score=268.74 Aligned_cols=249 Identities=21% Similarity=0.280 Sum_probs=187.0
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
.....|.+.+.||.|+||.||.+.. .. ++.||+|.+.... ......+.+|+++++.++||||+++++++...
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~-~~-~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 74 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLW-KN-RVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVG---- 74 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEe-cC-CCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecC----
Confidence 4456788999999999999997554 33 8899999986532 22345577899999999999999999987654
Q ss_pred CCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus 75 --~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~ 152 (261)
T cd05148 75 --EPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLAR 152 (261)
T ss_pred --CCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchh
Confidence 3568888887 6799998864 358999999999999999999999999999999999999999999999999886
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
....... ...+..+++.|+|||
T Consensus 153 ~~~~~~~----------------------------------------------------------~~~~~~~~~~~~~PE 174 (261)
T cd05148 153 LIKEDVY----------------------------------------------------------LSSDKKIPYKWTAPE 174 (261)
T ss_pred hcCCccc----------------------------------------------------------cccCCCCceEecCHH
Confidence 4322100 000122456788888
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
++....+..++|+|++|++++.+.+ +..+|......+.......... . ......++.+.++|.+||+.||.+
T Consensus 175 ~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~i~~~l~~~p~~ 247 (261)
T cd05148 175 AASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR-M------PCPAKCPQEIYKIMLECWAAEPED 247 (261)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc-C------CCCCCCCHHHHHHHHHHcCCCchh
Confidence 8877667778899999999988754 4444432221222222211110 0 112346788999999999999999
Q ss_pred CCCHHHHhc
Q psy8260 376 RITAEQALA 384 (427)
Q Consensus 376 R~ta~e~L~ 384 (427)
|||++++++
T Consensus 248 Rpt~~~l~~ 256 (261)
T cd05148 248 RPSFKALRE 256 (261)
T ss_pred CcCHHHHHH
Confidence 999999875
No 325
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.9e-34 Score=272.51 Aligned_cols=255 Identities=24% Similarity=0.432 Sum_probs=192.0
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|.+.+.+|.|+||.||.+. +..++..||+|++..... ....+.+|+++++.++|+||+++++.+...
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 87 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKAT-DRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVG------ 87 (286)
T ss_pred cccchHhHhccCCCCeEEEEEE-EccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC------
Confidence 3457778899999999999754 556789999999865322 445677999999999999999999988654
Q ss_pred ceEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
...|++++++ +++|.+++... .+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++....
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 88 DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 4578888888 58999998765 79999999999999999999999999999999999999999999999999865322
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
.... ......+++.|+|||++.
T Consensus 168 ~~~~----------------------------------------------------------~~~~~~~~~~y~~PE~~~ 189 (286)
T cd06614 168 KEKS----------------------------------------------------------KRNSVVGTPYWMAPEVIK 189 (286)
T ss_pred cchh----------------------------------------------------------hhccccCCcccCCHhHhc
Confidence 1100 001123566788888877
Q ss_pred hccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
+..+..++|+|++|++++.+-++..++........... ...... .. . ......+.++++||.+||+.||.+|||+
T Consensus 190 ~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~-~~~~~~-~~--~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~ 264 (286)
T cd06614 190 RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFL-ITTKGI-PP--L-KNPEKWSPEFKDFLNKCLVKDPEKRPSA 264 (286)
T ss_pred CCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcCC-CC--C-cchhhCCHHHHHHHHHHhccChhhCcCH
Confidence 76677788999999999888555444432211111111 111110 00 0 0112357789999999999999999999
Q ss_pred HHHhcCCCCCC
Q psy8260 380 EQALAHPYLSQ 390 (427)
Q Consensus 380 ~e~L~Hp~f~~ 390 (427)
.|+++||||.+
T Consensus 265 ~~il~~~~~~~ 275 (286)
T cd06614 265 EELLQHPFLKK 275 (286)
T ss_pred HHHhhChHhhc
Confidence 99999999987
No 326
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=9.3e-34 Score=267.24 Aligned_cols=249 Identities=23% Similarity=0.307 Sum_probs=184.5
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
++....|.+.+.||.|+||.||++.. .+++.||+|.+...... ...+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~--~~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 72 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYY--NGHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ---- 72 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeec--CCCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc----
Confidence 56677899999999999999998653 45788999988654332 3467789999999999999999988643
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...+++++++ +++|.+++.. ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++
T Consensus 73 ---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 73 ---EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred ---CCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcce
Confidence 2467888877 7899888753 35889999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
......... ...+..++..|+||
T Consensus 150 ~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~~p 172 (260)
T cd05067 150 RLIEDNEYT---------------------------------------------------------AREGAKFPIKWTAP 172 (260)
T ss_pred eecCCCCcc---------------------------------------------------------cccCCcccccccCH
Confidence 643211000 00112345668888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++....+..++|+||+|++++.+.+ +..+|.......... ........ ......+.++.+||.+||..||+
T Consensus 173 e~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~ 245 (260)
T cd05067 173 EAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ-NLERGYRM------PRPDNCPEELYELMRLCWKEKPE 245 (260)
T ss_pred HHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH-HHHcCCCC------CCCCCCCHHHHHHHHHHccCChh
Confidence 88776667778899999999876644 444443222111111 11111110 11234567899999999999999
Q ss_pred CCCCHHHHhc
Q psy8260 375 KRITAEQALA 384 (427)
Q Consensus 375 ~R~ta~e~L~ 384 (427)
+|||++++++
T Consensus 246 ~Rp~~~~l~~ 255 (260)
T cd05067 246 ERPTFEYLRS 255 (260)
T ss_pred hCCCHHHHHH
Confidence 9999999875
No 327
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.6e-34 Score=284.84 Aligned_cols=258 Identities=22% Similarity=0.275 Sum_probs=186.4
Q ss_pred ccccCcceeeccccCcccccEEEEeEEe----CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALD----SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVF 133 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~----~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~ 133 (427)
+++....+.+++.||+|+||.||.+... ..++..||||++.... .....+.+.+|+.+|..+. |||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 4666778889999999999999976542 3456789999997543 2333456789999999997 99999999987
Q ss_pred ecCccccCCceEEEEeccC-CCCHHHHHhhC-------------------------------------------------
Q psy8260 134 HSNTCLADFKNVYMVTHLM-GADLNNILRTQ------------------------------------------------- 163 (427)
Q Consensus 134 ~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~------------------------------------------------- 163 (427)
... ..+++++|++ +++|.++++..
T Consensus 111 ~~~------~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T cd05107 111 TKG------GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKD 184 (401)
T ss_pred ccC------CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCc
Confidence 653 3578899887 78998887532
Q ss_pred --------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q psy8260 164 --------------------------------------------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRD 193 (427)
Q Consensus 164 --------------------------------------------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrD 193 (427)
.+++..+..++.|++.||.|||+++|+|||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrd 264 (401)
T cd05107 185 ESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRD 264 (401)
T ss_pred cccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCccc
Confidence 246667788999999999999999999999
Q ss_pred CCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhcc
Q psy8260 194 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDF 273 (427)
Q Consensus 194 LKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~ 273 (427)
|||+|||++.++.+||+|||+++.........
T Consensus 265 lkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~------------------------------------------------ 296 (401)
T cd05107 265 LAARNVLICEGKLVKICDFGLARDIMRDSNYI------------------------------------------------ 296 (401)
T ss_pred CCcceEEEeCCCEEEEEecCcceecccccccc------------------------------------------------
Confidence 99999999999999999999986432110000
Q ss_pred CCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHh
Q psy8260 274 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQ 352 (427)
Q Consensus 274 g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (427)
......+++.|+|||++.+..+...+|+||+|++++.+.+ +..|+......+............ .
T Consensus 297 --------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~------~ 362 (401)
T cd05107 297 --------SKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRM------A 362 (401)
T ss_pred --------cCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCC------C
Confidence 0011235677888888877667777899999999876532 222222111111111111111000 1
Q ss_pred hcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 353 VFKGANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 353 ~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
.....++++.+||.+|++.||.+|||++|+++.
T Consensus 363 ~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 363 KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 123467899999999999999999999999864
No 328
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.2e-34 Score=274.62 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=180.8
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCc--EEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGV--KVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~--~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~ 139 (427)
-+.|.+.+.||+|+||.||.+.. ..+|. .+|+|.+... ........+.+|+.++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~-~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~--- 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARI-KKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--- 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEE-ccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC---
Confidence 45688889999999999997654 44554 4678776532 2334455677899999999 899999999987643
Q ss_pred cCCceEEEEeccC-CCCHHHHHhhC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEE
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRTQ-----------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 201 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~~-----------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl 201 (427)
...|++++++ +++|.++++.. .+++..+..++.|++.||+|||++||+||||||+|||+
T Consensus 81 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili 157 (303)
T cd05088 81 ---GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 157 (303)
T ss_pred ---CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe
Confidence 3578888887 78999888532 47888999999999999999999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcc
Q psy8260 202 NEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTEN 281 (427)
Q Consensus 202 ~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~ 281 (427)
+.++.+||+|||+++........
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------------------- 180 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVYVKK--------------------------------------------------------- 180 (303)
T ss_pred cCCCcEEeCccccCcccchhhhc---------------------------------------------------------
Confidence 99999999999987532110000
Q ss_pred ccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChh
Q psy8260 282 EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQ 360 (427)
Q Consensus 282 ~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 360 (427)
....++..|+|||++.+..+...+|+||+|++++.+.+ +..+|......+... ........ ......+++
T Consensus 181 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~ 251 (303)
T cd05088 181 --TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE-KLPQGYRL------EKPLNCDDE 251 (303)
T ss_pred --ccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHH-HHhcCCcC------CCCCCCCHH
Confidence 00112456888887777667778899999999987743 333343221111111 11110000 111235788
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 361 AIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 361 ~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
+.+||.+||+.||.+|||+++++++
T Consensus 252 ~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 252 VYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999999986
No 329
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-33 Score=265.99 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=184.9
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC-CCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF-QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
+.|++.+.||.|+||.||.+ .+..+|+.||+|.+.... ........+.+|++++++++|+||+++++.+...
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~------ 74 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKA-ICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN------ 74 (267)
T ss_pred CceeeeeeeccCCceEEEEE-EEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC------
Confidence 46888999999999999965 455789999999886432 2233456678999999999999999999988653
Q ss_pred ceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
...+++++++ +++|..++.. ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceee
Confidence 4578888887 6799888753 348899999999999999999999999999999999999999999999999876
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchH
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPE 296 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APE 296 (427)
....... ......|++.|+|||
T Consensus 155 ~~~~~~~----------------------------------------------------------~~~~~~~~~~y~apE 176 (267)
T cd08224 155 FFSSKTT----------------------------------------------------------AAHSLVGTPYYMSPE 176 (267)
T ss_pred eccCCCc----------------------------------------------------------ccceecCCccccCHH
Confidence 4322100 001223566788888
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 297 IMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 297 vl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
++.+..+...+|+|++|++++.+-++..++...... ......... ....... ....+.+..++|.+||..||++
T Consensus 177 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~i~~cl~~~p~~ 251 (267)
T cd08224 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK-CDYPPLP----ADHYSEELRDLVSRCINPDPEK 251 (267)
T ss_pred HhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc-CCCCCCC----hhhcCHHHHHHHHHHcCCCccc
Confidence 777666777889999999998775444444221110 001011100 0000000 1145678999999999999999
Q ss_pred CCCHHHHhc
Q psy8260 376 RITAEQALA 384 (427)
Q Consensus 376 R~ta~e~L~ 384 (427)
|||+.++++
T Consensus 252 Rp~~~~il~ 260 (267)
T cd08224 252 RPDISYVLQ 260 (267)
T ss_pred CCCHHHHHH
Confidence 999999874
No 330
>KOG0696|consensus
Probab=100.00 E-value=1.5e-35 Score=279.26 Aligned_cols=262 Identities=21% Similarity=0.262 Sum_probs=201.9
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHHHhcC-CCCCceeeeeeeecCc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRMLKHM-NHENVIGLLDVFHSNT 137 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~ 137 (427)
-+...+|.+..+||+|+||.|..+. .+.|.+.+|||++++...-+ .+.+-...|-++|... +-|.+++|+.+|++.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLae-rkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm- 422 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAE-RKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM- 422 (683)
T ss_pred ceeecccceEEEeccCccceeeeec-ccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh-
Confidence 3445678899999999999999654 45577899999987653221 1233345677777766 457889998777654
Q ss_pred cccCCceEEEEeccC-CCCHHH-HHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNN-ILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~-~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
+.+|+||||+ ||+|-. +.+-++|.|..+..|+.+|+-||-|||++|||.||||.+|||+|.+|++||+|||++
T Consensus 423 -----DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmc 497 (683)
T KOG0696|consen 423 -----DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMC 497 (683)
T ss_pred -----hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccc
Confidence 5689999998 778754 445588999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+.---. .....++||||.|+||
T Consensus 498 KEni~~----------------------------------------------------------~~TTkTFCGTPdYiAP 519 (683)
T KOG0696|consen 498 KENIFD----------------------------------------------------------GVTTKTFCGTPDYIAP 519 (683)
T ss_pred cccccC----------------------------------------------------------CcceeeecCCCccccc
Confidence 731100 0023467899999999
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
|++...+|...+|||+.|+++|+|..+.+||..+...+....+...+.. +.+..|.+|.++...+|...|.+
T Consensus 520 EIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs--------yPKslSkEAv~ickg~ltK~P~k 591 (683)
T KOG0696|consen 520 EIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS--------YPKSLSKEAVAICKGLLTKHPGK 591 (683)
T ss_pred ceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc--------CcccccHHHHHHHHHHhhcCCcc
Confidence 9998888999999999999999886666666655433333333322222 23467899999999999999999
Q ss_pred CCCH-----HHHhcCCCCCCCCCC
Q psy8260 376 RITA-----EQALAHPYLSQYSDP 394 (427)
Q Consensus 376 R~ta-----~e~L~Hp~f~~~~~~ 394 (427)
|+.+ +++-.||||+.+...
T Consensus 592 RLGcg~~ge~di~~H~FFR~iDWe 615 (683)
T KOG0696|consen 592 RLGCGPEGERDIREHPFFRRIDWE 615 (683)
T ss_pred ccCCCCccccchhhCcchhhccHH
Confidence 9854 689999999976543
No 331
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.9e-33 Score=267.98 Aligned_cols=251 Identities=21% Similarity=0.241 Sum_probs=181.4
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCc----EEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGV----KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~----~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
....|++.+.||.|+||.||++... .+|. .||+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~- 81 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWI-PDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS- 81 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEe-cCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-
Confidence 3456888899999999999976543 2333 5899988643 2334456678999999999999999999886532
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGl 214 (427)
..+++++++ +++|.++++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 82 ------~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~ 155 (279)
T cd05109 82 ------TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGL 155 (279)
T ss_pred ------CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCc
Confidence 245566655 7899888864 3589999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
++......... ...+..+++.|+|
T Consensus 156 ~~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~y~~ 179 (279)
T cd05109 156 ARLLDIDETEY--------------------------------------------------------HADGGKVPIKWMA 179 (279)
T ss_pred eeeccccccee--------------------------------------------------------ecCCCccchhhCC
Confidence 87543211000 0011224566888
Q ss_pred hHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 295 PEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 295 PEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
||++.+..+..++|+||+|++++.+.+ +..++... ........+...... ......++++.++|.+||+.||
T Consensus 180 PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dp 252 (279)
T cd05109 180 LESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI-PAREIPDLLEKGERL------PQPPICTIDVYMIMVKCWMIDS 252 (279)
T ss_pred HHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHCCCcC------CCCccCCHHHHHHHHHHcCCCh
Confidence 888777667778899999999987533 33333211 111122222211111 1123457889999999999999
Q ss_pred CCCCCHHHHhc
Q psy8260 374 EKRITAEQALA 384 (427)
Q Consensus 374 ~~R~ta~e~L~ 384 (427)
++|||+.++++
T Consensus 253 ~~Rp~~~~l~~ 263 (279)
T cd05109 253 ECRPRFRELVD 263 (279)
T ss_pred hhCcCHHHHHH
Confidence 99999999984
No 332
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.1e-34 Score=273.40 Aligned_cols=255 Identities=19% Similarity=0.279 Sum_probs=185.9
Q ss_pred ceeeccccCcccccEEEEeEEe---CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALD---SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~---~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
.|.+.+.||+|+||.||.+..+ ..++..||+|.+... ........+.+|+++++.++||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~ 79 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE-SGGNHIADLKKEIEILRNLYHENIVKYKGICTED----G 79 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC----C
Confidence 3567789999999999977643 457889999998643 2344456688999999999999999999987543 1
Q ss_pred CceEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
....++++|++ |++|.+++... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++..
T Consensus 80 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 80 GNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred CCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccc
Confidence 24578888888 78999988543 4899999999999999999999999999999999999999999999999998754
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
....... . ......|+..|+|||++
T Consensus 160 ~~~~~~~------~-------------------------------------------------~~~~~~~~~~y~apE~~ 184 (284)
T cd05079 160 ETDKEYY------T-------------------------------------------------VKDDLDSPVFWYAPECL 184 (284)
T ss_pred ccCccce------e-------------------------------------------------ecCCCCCCccccCHHHh
Confidence 2211000 0 00122356678888888
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHH-------hhc----Cc---HHHHHHHhcCCCCCcccHHhhcCCCChhHHHH
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFM-------AKI----SS---DSARKYINSLPLLTKKDFRQVFKGANPQAIDL 364 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~-------~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 364 (427)
.+..+...+|+||+|++++.+.+...+.. ... .. ....+...... ........++++.+|
T Consensus 185 ~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l 258 (284)
T cd05079 185 IQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK------RLPRPPNCPEEVYQL 258 (284)
T ss_pred ccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc------cCCCCCCCCHHHHHH
Confidence 77777778899999999987754221110 000 00 00000000000 011234567899999
Q ss_pred HHHhcCCCCCCCCCHHHHhcC
Q psy8260 365 LSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 365 i~~mL~~dP~~R~ta~e~L~H 385 (427)
|.+||+.||.+|||+++++++
T Consensus 259 i~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 259 MRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHHccCCcccCcCHHHHHHH
Confidence 999999999999999999864
No 333
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.3e-33 Score=270.32 Aligned_cols=254 Identities=20% Similarity=0.241 Sum_probs=184.6
Q ss_pred ccCcceeeccccCcccccEEEEeEEe----CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecC
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALD----SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSN 136 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~----~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~ 136 (427)
+..++|++.+.||.|+||.||.+... ..++..||+|.+.... .......+.+|+.++++++||||+++++++...
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 34567889999999999999976542 2467899999886432 334445677899999999999999999987643
Q ss_pred ccccCCceEEEEeccC-CCCHHHHHhhC-----------------------CCCHHHHHHHHHHHHHHHHHHHhcCceec
Q psy8260 137 TCLADFKNVYMVTHLM-GADLNNILRTQ-----------------------KLSDDHVQFLVYQILRGLKYIHSAGIIHR 192 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~-g~~L~~~l~~~-----------------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHr 192 (427)
...++++|++ +++|.+++... .+++..+..++.|++.||.|||+++++||
T Consensus 81 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~ 154 (288)
T cd05050 81 ------KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHR 154 (288)
T ss_pred ------CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 3568888887 67999888532 36778889999999999999999999999
Q ss_pred cCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhc
Q psy8260 193 DLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILD 272 (427)
Q Consensus 193 DLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d 272 (427)
||||+||+++.++.+||+|||+++....... +.
T Consensus 155 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-------~~---------------------------------------- 187 (288)
T cd05050 155 DLATRNCLVGENMVVKIADFGLSRNIYSADY-------YK---------------------------------------- 187 (288)
T ss_pred cccHhheEecCCCceEECccccceecccCcc-------cc----------------------------------------
Confidence 9999999999999999999998764321100 00
Q ss_pred cCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHH
Q psy8260 273 FGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFR 351 (427)
Q Consensus 273 ~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (427)
......+++.|+|||++.+..+..++|+||+|++++.+-+ +..+|......+......... ..
T Consensus 188 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~-~~------ 251 (288)
T cd05050 188 ---------ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGN-VL------ 251 (288)
T ss_pred ---------ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CC------
Confidence 0001123456889998887777888999999999877743 332332211111111111111 00
Q ss_pred hhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 352 QVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 352 ~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
......++++.+||.+||+.||.+|||++|+++
T Consensus 252 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 252 SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 111245688999999999999999999999874
No 334
>KOG2345|consensus
Probab=100.00 E-value=4.3e-35 Score=260.31 Aligned_cols=260 Identities=21% Similarity=0.247 Sum_probs=184.6
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
-++..+|.+.+.+|+|||.-|+.. .+..++..+|+|++.-. +....+..++|++..++++||||++++++......
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV-~~~s~~~~YAlKkI~c~--~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~- 92 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLV-KGLSTGHLYALKKILCH--SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK- 92 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeee-cccCcccchhhheeecc--chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc-
Confidence 355678999999999999999964 46788999999999654 34566778999999999999999999887432211
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCCeEEcCCCCEEEee
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNEDCELKILD 211 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~--iiHrDLKp~NILl~~~~~~kl~D 211 (427)
+.....|+++.+. .|+|.+.++. ..+++.++..++.+|++||++||+.. ..||||||.|||+.+.+.++|.|
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D 172 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMD 172 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEe
Confidence 1234577777655 6788776642 35899999999999999999999998 99999999999999999999999
Q ss_pred CCCCCCCCCCc------------ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCC
Q psy8260 212 FGLARPTENEM------------TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPT 279 (427)
Q Consensus 212 FGla~~~~~~~------------~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~ 279 (427)
||.+....-.. ..-..|..|+|||++.- +
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~v----------------k----------------------- 213 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNV----------------K----------------------- 213 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheec----------------c-----------------------
Confidence 99987543211 11233445555555321 0
Q ss_pred ccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCCh
Q psy8260 280 ENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANP 359 (427)
Q Consensus 280 ~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 359 (427)
.+.....++|+||||+.+|.+-.+..||.....+...-.+.-..+.. .+.+. ...|.
T Consensus 214 -------------------~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~---s~P~~-~~yse 270 (302)
T KOG2345|consen 214 -------------------SHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQI---SIPNS-SRYSE 270 (302)
T ss_pred -------------------cCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeecccc---ccCCC-CCccH
Confidence 01224567899999999987755444443322111000000001110 11111 12678
Q ss_pred hHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 360 QAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 360 ~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
....||+.||+.||.+|||+.+++.+
T Consensus 271 ~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 271 ALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 88999999999999999999999875
No 335
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.5e-33 Score=265.96 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=181.8
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
++..+.+.+...||+|+||.||.+.. . .+..||+|.+..... ..+.+.+|+++++.++|||++++++++..
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~-~-~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 72 (260)
T cd05069 2 EIPRESLRLDVKLGQGCFGEVWMGTW-N-GTTKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE---- 72 (260)
T ss_pred cCChHHeeeeeeecCcCCCeEEEEEE-c-CCceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC----
Confidence 45567788999999999999997643 2 334699998764322 23457789999999999999999988643
Q ss_pred cCCceEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...+++|+++ +++|.+++... .+++..+..++.|++.||.|||++|++||||||+||++++++.+||+|||++
T Consensus 73 ---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~ 149 (260)
T cd05069 73 ---EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLA 149 (260)
T ss_pred ---CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccc
Confidence 2357888877 57999888642 3788999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+........ ...+..++..|+||
T Consensus 150 ~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~~P 172 (260)
T cd05069 150 RLIEDNEYT---------------------------------------------------------ARQGAKFPIKWTAP 172 (260)
T ss_pred eEccCCccc---------------------------------------------------------ccCCCccchhhCCH
Confidence 643211000 00111245668888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+......+|+||+|++++.+-+ +..++............. ..... ......+..+.+||.+||..||.
T Consensus 173 e~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~li~~~l~~~p~ 245 (260)
T cd05069 173 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE-RGYRM------PCPQGCPESLHELMKLCWKKDPD 245 (260)
T ss_pred HHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCC------CCCcccCHHHHHHHHHHccCCcc
Confidence 88777667777899999999987754 444443322111111111 11111 11234578899999999999999
Q ss_pred CCCCHHHHhc
Q psy8260 375 KRITAEQALA 384 (427)
Q Consensus 375 ~R~ta~e~L~ 384 (427)
+|||++++++
T Consensus 246 ~Rp~~~~i~~ 255 (260)
T cd05069 246 ERPTFEYIQS 255 (260)
T ss_pred cCcCHHHHHH
Confidence 9999999874
No 336
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.6e-33 Score=267.11 Aligned_cols=255 Identities=20% Similarity=0.249 Sum_probs=186.6
Q ss_pred ccCcceeeccccCcccccEEEEeEEeC---cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDS---VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
+....|.+.+.||+|+||.||++.... .++..||+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~- 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED- 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-
Confidence 345678899999999999999877654 23688999987643 3445566678999999999999999999976432
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhh---------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCE
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRT---------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCEL 207 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~---------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~ 207 (427)
....+++++++ +++|..++.. ..+++..+..++.|++.||.|||+++++||||||+||+++.++.+
T Consensus 81 ----~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 81 ----GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred ----CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcE
Confidence 13457777776 6899888754 348899999999999999999999999999999999999999999
Q ss_pred EEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccc
Q psy8260 208 KILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 287 (427)
Q Consensus 208 kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~ 287 (427)
||+|||+++......... ......
T Consensus 157 kl~d~g~~~~~~~~~~~~--------------------------------------------------------~~~~~~ 180 (280)
T cd05043 157 KITDNALSRDLFPMDYHC--------------------------------------------------------LGDNEN 180 (280)
T ss_pred EECCCCCcccccCCceEE--------------------------------------------------------eCCCCC
Confidence 999999987532211000 000112
Q ss_pred ccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHH
Q psy8260 288 ATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLS 366 (427)
Q Consensus 288 gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~ 366 (427)
++..|+|||++.+..+..++|+||+|++++.+-+ +..||.... ............... .....++++.+++.
T Consensus 181 ~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~li~ 253 (280)
T cd05043 181 RPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID-PFEMAAYLKDGYRLA------QPINCPDELFAVMA 253 (280)
T ss_pred cchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC-HHHHHHHHHcCCCCC------CCCcCCHHHHHHHH
Confidence 4566888888877777778899999999877644 444443221 112222221111110 11234678999999
Q ss_pred HhcCCCCCCCCCHHHHhc
Q psy8260 367 LMLELDSEKRITAEQALA 384 (427)
Q Consensus 367 ~mL~~dP~~R~ta~e~L~ 384 (427)
+|++.||++|||+.|+++
T Consensus 254 ~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 254 CCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHcCCChhhCCCHHHHHH
Confidence 999999999999999985
No 337
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.3e-33 Score=265.46 Aligned_cols=243 Identities=21% Similarity=0.317 Sum_probs=179.8
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
....|++.+.+|.|+||.||.+.. .|+.||||.+..... ..+++.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~---~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 72 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDY---RGQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQG----- 72 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEe---cCcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCC-----
Confidence 345678889999999999997653 478999999865422 456688999999999999999999987642
Q ss_pred CceEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
...+++++++ +++|.++++.. .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.
T Consensus 73 -~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~ 151 (256)
T cd05039 73 -NPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151 (256)
T ss_pred -CCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccc
Confidence 4578888888 57999988653 589999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
......... ++..|+|||+
T Consensus 152 ~~~~~~~~~-------------------------------------------------------------~~~~~~ape~ 170 (256)
T cd05039 152 ASQGQDSGK-------------------------------------------------------------LPVKWTAPEA 170 (256)
T ss_pred cccccccCC-------------------------------------------------------------CcccccCchh
Confidence 422211111 2234666666
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
+....+...+|+||+|++++.+-+ +..+|... ............... ......++++.|||.+||..||++|
T Consensus 171 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~R 243 (256)
T cd05039 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPHVEKGYRM------EAPEGCPPEVYKVMKDCWELDPAKR 243 (256)
T ss_pred hcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHhcCCCC------CCccCCCHHHHHHHHHHhccChhhC
Confidence 655555667899999999865522 22223221 111111111111100 1123457899999999999999999
Q ss_pred CCHHHHhc
Q psy8260 377 ITAEQALA 384 (427)
Q Consensus 377 ~ta~e~L~ 384 (427)
||++|+++
T Consensus 244 p~~~~l~~ 251 (256)
T cd05039 244 PTFKQLRE 251 (256)
T ss_pred cCHHHHHH
Confidence 99999985
No 338
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2e-33 Score=268.38 Aligned_cols=254 Identities=21% Similarity=0.300 Sum_probs=183.5
Q ss_pred cceeeccccCcccccEEEEeEE---eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSAL---DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~---~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
..+.+.+.||+|+||.||.+.. +..++..||||++... .....+.+.+|+++++.++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---- 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC----
Confidence 3577889999999999998764 4567899999998643 334456678999999999999999999876432
Q ss_pred CCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
+...++++++++ +++|.+++.. ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 78 GRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred CCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 223578889887 7899998864 3589999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
......... ......++..|+|||+
T Consensus 158 ~~~~~~~~~-------------------------------------------------------~~~~~~~~~~y~aPE~ 182 (284)
T cd05081 158 LPQDKEYYK-------------------------------------------------------VREPGESPIFWYAPES 182 (284)
T ss_pred ccCCCccee-------------------------------------------------------ecCCCCCceEeeCHHH
Confidence 432111000 0000113345888888
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHH-------HHhhcCcH-----H---HHHHHhcCCCCCcccHHhhcCCCChhHH
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAE-------FMAKISSD-----S---ARKYINSLPLLTKKDFRQVFKGANPQAI 362 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~-------~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 362 (427)
+.+..+...+|+||+|++++.+.+...+ +....... . .......... .......++++.
T Consensus 183 ~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 256 (284)
T cd05081 183 LTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGR------LPAPPGCPAEIY 256 (284)
T ss_pred hccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCc------CCCCCCCCHHHH
Confidence 8776677788999999999877543211 11100000 0 0000000000 011234567899
Q ss_pred HHHHHhcCCCCCCCCCHHHHhc
Q psy8260 363 DLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 363 dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
+||.+||..||++|||++|+++
T Consensus 257 ~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 257 AIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999999999976
No 339
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.2e-33 Score=272.03 Aligned_cols=267 Identities=15% Similarity=0.174 Sum_probs=182.1
Q ss_pred ccccCcceeeccccCcccccEEEEeEEeCcC---CcEEEEEEccCcCCCHHH---------HHHHHHHHHHHhcCCCCCc
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVS---GVKVAIKKIARPFQSAVH---------AKRTYRELRMLKHMNHENV 126 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~---g~~vAvK~i~~~~~~~~~---------~~~~~~Ei~~l~~l~HpnI 126 (427)
.++....|.+.+.||+|+||.||++.. ..+ +..+|+|+.......... ......+...+..++|+||
T Consensus 7 ~~i~~~~y~i~~~LG~G~fG~Vy~~~~-~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i 85 (294)
T PHA02882 7 IDITGKEWKIDKLIGCGGFGCVYETQC-ASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI 85 (294)
T ss_pred eccCCCceEEeeEEecCCCceEEEEEE-cCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence 355567899999999999999997654 334 556777754322111100 0112234455677899999
Q ss_pred eeeeeeeecCccccCCceEEEEeccCCCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC
Q psy8260 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205 (427)
Q Consensus 127 v~l~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~ 205 (427)
+++++......+. ....+++++....++.+++... ..++..+..++.|++.||+|||+++|+||||||+|||++.++
T Consensus 86 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 86 PKYYGCGSFKRCR--MYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN 163 (294)
T ss_pred CcEEEeeeEecCC--ceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 9999875443221 1234667777766777666543 478888999999999999999999999999999999999999
Q ss_pred CEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccc
Q psy8260 206 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG 285 (427)
Q Consensus 206 ~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~ 285 (427)
.+||+|||+|+........ ..|. ......
T Consensus 164 ~~~l~DFGla~~~~~~~~~----~~~~-----------------------------------------------~~~~~~ 192 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKH----IEYS-----------------------------------------------KEQKDL 192 (294)
T ss_pred cEEEEEcCCceeeccCCcc----cccc-----------------------------------------------cccccc
Confidence 9999999998754321100 0000 001122
Q ss_pred ccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHH-----HHHhcCCCCCcccHHhhcCCCChh
Q psy8260 286 YVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSAR-----KYINSLPLLTKKDFRQVFKGANPQ 360 (427)
Q Consensus 286 ~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~~ 360 (427)
..||+.|+|||+..+..+..++|+||+|++++.+.++..||.......... .+...... . +......+++
T Consensus 193 ~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~ 267 (294)
T PHA02882 193 HRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHE---G--KIKIKNANKF 267 (294)
T ss_pred cCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhh---h--hhccCCCCHH
Confidence 358999999999988888888999999999988876666664331111110 11111100 0 0012344678
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 361 AIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 361 ~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
+.|+++.|+..||.+||+.+++++
T Consensus 268 ~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 268 IYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999999999999999999875
No 340
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.3e-33 Score=265.54 Aligned_cols=243 Identities=21% Similarity=0.297 Sum_probs=177.9
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
....|.+.+.+|+|+||.||.+.. .|..||+|.+... ...+.+.+|+.+++.++|+|++++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~---~~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 71 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----- 71 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEE---cCCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-----
Confidence 345678889999999999997643 4788999988542 1234577999999999999999999875432
Q ss_pred CceEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
....|++++++ +++|.++++.. .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCcccee
Confidence 23578889888 67999888643 378899999999999999999999999999999999999999999999998864
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
........ .++..|+|||+
T Consensus 152 ~~~~~~~~-------------------------------------------------------------~~~~~y~aPE~ 170 (256)
T cd05082 152 ASSTQDTG-------------------------------------------------------------KLPVKWTAPEA 170 (256)
T ss_pred ccccCCCC-------------------------------------------------------------ccceeecCHHH
Confidence 32211111 12345777777
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
+.+..+...+|+|++|++++.+-+ +..++......... ....... . ....+..++.+.++|.+||+.||++|
T Consensus 171 ~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~-~~~~~~~--~----~~~~~~~~~~~~~li~~~l~~~p~~R 243 (256)
T cd05082 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-PRVEKGY--K----MDAPDGCPPVVYDVMKQCWHLDAATR 243 (256)
T ss_pred HccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHhcCC--C----CCCCCCCCHHHHHHHHHHhcCChhhC
Confidence 666666677899999999876632 32233211111111 1111100 0 01223567889999999999999999
Q ss_pred CCHHHHhc
Q psy8260 377 ITAEQALA 384 (427)
Q Consensus 377 ~ta~e~L~ 384 (427)
||+.++++
T Consensus 244 pt~~~l~~ 251 (256)
T cd05082 244 PSFLQLRE 251 (256)
T ss_pred cCHHHHHH
Confidence 99999975
No 341
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4.2e-34 Score=266.36 Aligned_cols=227 Identities=21% Similarity=0.282 Sum_probs=168.3
Q ss_pred ccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEeccC-C
Q psy8260 75 ESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-G 153 (427)
Q Consensus 75 g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-g 153 (427)
|.||.||. +.+..+|+.||+|++.... ...+|...+....||||+++++++... ...++++|++ +
T Consensus 4 g~~~~v~~-~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~lv~e~~~~ 69 (237)
T cd05576 4 GVIDKVLL-VMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSE------DSVFLVLQHAEG 69 (237)
T ss_pred cccceEEE-EEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecC------CeEEEEEecCCC
Confidence 78899985 6788899999999986532 123455555566899999999987643 4578888887 6
Q ss_pred CCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccccccccc
Q psy8260 154 ADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 232 (427)
Q Consensus 154 ~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~ 232 (427)
++|.+.+.. ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++++|||++........+..+
T Consensus 70 ~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~----- 144 (237)
T cd05576 70 GKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAV----- 144 (237)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCc-----
Confidence 789887644 56999999999999999999999999999999999999999999999999987544332222223
Q ss_pred chhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHH
Q psy8260 233 APEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQL 312 (427)
Q Consensus 233 aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~sl 312 (427)
+..|+|||.+.+..+..++|+||+
T Consensus 145 --------------------------------------------------------~~~y~aPE~~~~~~~~~~~Dvwsl 168 (237)
T cd05576 145 --------------------------------------------------------ENMYCAPEVGGISEETEACDWWSL 168 (237)
T ss_pred --------------------------------------------------------CccccCCcccCCCCCCchhhHHHH
Confidence 344555655544445667899999
Q ss_pred HHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH-----HHHhcCCC
Q psy8260 313 NLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA-----EQALAHPY 387 (427)
Q Consensus 313 g~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta-----~e~L~Hp~ 387 (427)
|++++.+-++..++..... . ..... . .......++++++||.+||+.||++|+|+ +|+++|||
T Consensus 169 G~il~el~~g~~~~~~~~~--~----~~~~~---~---~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~ 236 (237)
T cd05576 169 GAILFELLTGKTLVECHPS--G----INTHT---T---LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPF 236 (237)
T ss_pred HHHHHHHHHCcchhhcCch--h----ccccc---c---cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCC
Confidence 9999877555443321110 0 00000 0 01123468899999999999999999996 99999999
Q ss_pred C
Q psy8260 388 L 388 (427)
Q Consensus 388 f 388 (427)
|
T Consensus 237 ~ 237 (237)
T cd05576 237 F 237 (237)
T ss_pred C
Confidence 8
No 342
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=8.4e-34 Score=271.70 Aligned_cols=257 Identities=22% Similarity=0.334 Sum_probs=186.3
Q ss_pred eeeccccCcccccEEEEeEE--eCcCCcEEEEEEccCcCCC--HHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcccc
Q psy8260 66 IDIGPTLSKESFDLIFSSAL--DSVSGVKVAIKKIARPFQS--AVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~--~~~~g~~vAvK~i~~~~~~--~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~ 140 (427)
|.+.+.||+|+||.||.+.. +..++..||||.+.+.... ......+.+|+.++.++ +||||+++++.+...
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~---- 77 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD---- 77 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC----
Confidence 56778999999999997543 2457789999988643221 22334567899999999 699999999887643
Q ss_pred CCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
...|++++++ +++|.+.+.. ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++..
T Consensus 78 --~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 78 --TKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred --CEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 4578899888 6788887754 56899999999999999999999999999999999999999999999999998643
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
...... ......|++.|+|||++
T Consensus 156 ~~~~~~---------------------------------------------------------~~~~~~~~~~y~aPE~~ 178 (288)
T cd05583 156 LAEEEE---------------------------------------------------------RAYSFCGTIEYMAPEVI 178 (288)
T ss_pred cccccc---------------------------------------------------------ccccccCCccccCHHHh
Confidence 221100 00112355667777766
Q ss_pred hhcc--CCCCCCHHHHHHHHHHhCCCCHHHHhhcCc----HHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 299 LNWM--HYNQTDIHQLNLIMEMLGTPPAEFMAKISS----DSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 299 ~~~~--~~~~~d~~slg~i~~~lg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
.+.. ...++|+|++|++++.+-++..++...... ..........+ ......++++.+||.+||+.|
T Consensus 179 ~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~~ 250 (288)
T cd05583 179 RGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP--------PFPKTMSAEARDFIQKLLEKD 250 (288)
T ss_pred cCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCC--------CCCcccCHHHHHHHHHHhcCC
Confidence 5443 455679999999998876655444321111 11111111111 112345788999999999999
Q ss_pred CCCCCC---HHHHhcCCCCCCCCC
Q psy8260 373 SEKRIT---AEQALAHPYLSQYSD 393 (427)
Q Consensus 373 P~~R~t---a~e~L~Hp~f~~~~~ 393 (427)
|++||| +.++|+||||+....
T Consensus 251 p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 251 PKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred HhhccCcchHHHHhcCcccccCCH
Confidence 999998 567799999987644
No 343
>KOG4721|consensus
Probab=100.00 E-value=3.3e-35 Score=286.33 Aligned_cols=243 Identities=21% Similarity=0.248 Sum_probs=185.8
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
++....+.-..-||.|+-|.||.+.++ ++.||||+++.- -..+|+.|++|+||||+.+.+++....
T Consensus 120 eiPFe~IsELeWlGSGaQGAVF~Grl~---netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCtqsP-- 185 (904)
T KOG4721|consen 120 EIPFEEISELEWLGSGAQGAVFLGRLH---NETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCTQSP-- 185 (904)
T ss_pred cCCHHHhhhhhhhccCcccceeeeecc---CceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeecCCc--
Confidence 333333334466999999999988764 568999988521 125889999999999999999976554
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.++|+|||| .|-|..+|+. +.+.......|..+|+.||.|||.+.|||||||.-||||..+..|||+|||.++.
T Consensus 186 ----cyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e 261 (904)
T KOG4721|consen 186 ----CYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKE 261 (904)
T ss_pred ----eeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHh
Confidence 468999998 6899999976 4688899999999999999999999999999999999999999999999998764
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
..... -...++||..||||||
T Consensus 262 ~~~~S-----------------------------------------------------------TkMSFaGTVaWMAPEv 282 (904)
T KOG4721|consen 262 LSDKS-----------------------------------------------------------TKMSFAGTVAWMAPEV 282 (904)
T ss_pred hhhhh-----------------------------------------------------------hhhhhhhhHhhhCHHH
Confidence 32211 1235789999999999
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCC-CChhHHHHHHHhcCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKG-ANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~dLi~~mL~~dP~~R 376 (427)
|++.+...++||||+|+++.+|.|...|+.+-.........- ...+.-..+. ...-++=||++|++-.|..|
T Consensus 283 IrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG-------sNsL~LpvPstcP~GfklL~Kqcw~sKpRNR 355 (904)
T KOG4721|consen 283 IRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG-------SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNR 355 (904)
T ss_pred hhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc-------CCcccccCcccCchHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999988776664332211110000 0000001112 23346678999999999999
Q ss_pred CCHHHHhcCC
Q psy8260 377 ITAEQALAHP 386 (427)
Q Consensus 377 ~ta~e~L~Hp 386 (427)
|+..|+|.|=
T Consensus 356 PSFrqil~Hl 365 (904)
T KOG4721|consen 356 PSFRQILLHL 365 (904)
T ss_pred ccHHHHHHHH
Confidence 9999999993
No 344
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.7e-33 Score=266.25 Aligned_cols=237 Identities=14% Similarity=0.187 Sum_probs=166.4
Q ss_pred cccCcccccEEEEeEEeCc-----------CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 70 PTLSKESFDLIFSSALDSV-----------SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~-----------~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
+.||+|+||.||++..... ....||+|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~-- 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS--HRDISLAFFETASMMRQVSHKHIVLLYGVCVRD-- 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh--hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 3689999999998875422 2346899987543 222334567899999999999999999987643
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCC-------EE
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE-------LK 208 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~-------~k 208 (427)
...+++++++ +++|..++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++. +|
T Consensus 77 ----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 77 ----VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred ----CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeE
Confidence 3457888887 5778777753 45899999999999999999999999999999999999986654 89
Q ss_pred EeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccc
Q psy8260 209 ILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA 288 (427)
Q Consensus 209 l~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~g 288 (427)
++|||++...... .... |
T Consensus 153 l~d~g~~~~~~~~-~~~~-------------------------------------------------------------~ 170 (262)
T cd05077 153 LSDPGIPITVLSR-QECV-------------------------------------------------------------E 170 (262)
T ss_pred eCCCCCCccccCc-cccc-------------------------------------------------------------c
Confidence 9999987543211 1122 3
Q ss_pred cccccchHHhh-hccCCCCCCHHHHHHHHHHhC-CCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHH
Q psy8260 289 TRWYRAPEIML-NWMHYNQTDIHQLNLIMEMLG-TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLS 366 (427)
Q Consensus 289 t~~Y~APEvl~-~~~~~~~~d~~slg~i~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~ 366 (427)
+..|+|||++. +..+...+|+||+|++++.+. .+..++..... .....+...... .....++++.+||.
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~li~ 241 (262)
T cd05077 171 RIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-AEKERFYEGQCM--------LVTPSCKELADLMT 241 (262)
T ss_pred cccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHhcCcc--------CCCCChHHHHHHHH
Confidence 44555666554 233555679999999998763 22333322111 111111111110 11223567899999
Q ss_pred HhcCCCCCCCCCHHHHhcC
Q psy8260 367 LMLELDSEKRITAEQALAH 385 (427)
Q Consensus 367 ~mL~~dP~~R~ta~e~L~H 385 (427)
+||+.||.+|||..|++++
T Consensus 242 ~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 242 HCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHcCCChhhCcCHHHHHHh
Confidence 9999999999999999975
No 345
>KOG1187|consensus
Probab=100.00 E-value=4e-34 Score=280.85 Aligned_cols=259 Identities=22% Similarity=0.298 Sum_probs=179.2
Q ss_pred CccccccC--cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeee
Q psy8260 56 QPYSEICR--GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVF 133 (427)
Q Consensus 56 ~~~~~~~~--~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~ 133 (427)
+.|.++.. +.|.-.+.||+|+||.||++.++. |+.||||++....... ..++.+|+.++.+++|||+|+|++++
T Consensus 65 fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~--~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 65 FSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD--GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred eeHHHHHHHHhCCchhcceecCCCeEEEEEEECC--CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 44555544 456666899999999999988854 4899999886543322 34589999999999999999999986
Q ss_pred ecCccccCCceEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcC---ceeccCCCCCeEEcCCCC
Q psy8260 134 HSNTCLADFKNVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCE 206 (427)
Q Consensus 134 ~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~---iiHrDLKp~NILl~~~~~ 206 (427)
... ....++|.||+ +|+|.+.+... .++|....+|+.++++||+|||... ||||||||+|||+|++..
T Consensus 141 ~e~-----~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 141 LEG-----GEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred ecC-----CceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 532 22467788877 68999988653 6899999999999999999999753 999999999999999999
Q ss_pred EEEeeCCCCCCCCC-CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccc
Q psy8260 207 LKILDFGLARPTEN-EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG 285 (427)
Q Consensus 207 ~kl~DFGla~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~ 285 (427)
+||+|||+|+.... ..... .
T Consensus 216 aKlsDFGLa~~~~~~~~~~~-----------------------------------------------------------~ 236 (361)
T KOG1187|consen 216 AKLSDFGLAKLGPEGDTSVS-----------------------------------------------------------T 236 (361)
T ss_pred EEccCccCcccCCcccccee-----------------------------------------------------------e
Confidence 99999999965432 11100 0
Q ss_pred c-cccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhc--CcHHHHHH----HhcC--CCCCcccHHhhcCC
Q psy8260 286 Y-VATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKI--SSDSARKY----INSL--PLLTKKDFRQVFKG 356 (427)
Q Consensus 286 ~-~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~--~~~~~~~~----~~~~--~~~~~~~~~~~~~~ 356 (427)
. .||.+|+|||.+.......++|++|+|+++.++.++..+..... .......+ +... ..+.+..+.. ..
T Consensus 237 ~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~--~~ 314 (361)
T KOG1187|consen 237 TVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKE--GE 314 (361)
T ss_pred ecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccC--CC
Confidence 1 46666666666655557778899999998866544443222111 01111111 1110 0000000000 01
Q ss_pred CC-----hhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 357 AN-----PQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 357 ~s-----~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
.. ..+..+..+|++.+|.+||++.|+++
T Consensus 315 ~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 315 YPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred CChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 11 12557888999999999999999753
No 346
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.1e-33 Score=264.52 Aligned_cols=244 Identities=28% Similarity=0.431 Sum_probs=183.6
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEec
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e 150 (427)
||.|+||.||.+. +..+++.||+|.+...... ......+.+|+.+++.++||||+++++.+..+ ...|++++
T Consensus 1 lg~G~~~~v~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~~v~e 73 (250)
T cd05123 1 LGKGSFGKVLLVR-KKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE------EKLYLVLE 73 (250)
T ss_pred CCCCCceEEEEEE-ECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC------CeeEEEEe
Confidence 6899999999754 5567899999988654322 22445677899999999999999999887643 46789998
Q ss_pred cC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccccc
Q psy8260 151 LM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 228 (427)
Q Consensus 151 ~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt 228 (427)
++ +++|.+++... .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++........
T Consensus 74 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~----- 148 (250)
T cd05123 74 YAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS----- 148 (250)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC-----
Confidence 88 88999888654 689999999999999999999999999999999999999999999999998864322100
Q ss_pred ccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCC
Q psy8260 229 RWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTD 308 (427)
Q Consensus 229 ~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d 308 (427)
......++..|+|||.+.+......+|
T Consensus 149 -----------------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D 175 (250)
T cd05123 149 -----------------------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVD 175 (250)
T ss_pred -----------------------------------------------------cccCCcCCccccChHHhCCCCCCchhh
Confidence 001123555667777666555666789
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH---HHHhcC
Q psy8260 309 IHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA---EQALAH 385 (427)
Q Consensus 309 ~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta---~e~L~H 385 (427)
+|++|++++.+.++..+|................. ......+.+..+||.+||..||.+|||+ +++++|
T Consensus 176 ~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 176 WWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPL--------RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC--------CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 99999998877666655532211111111111000 1122347789999999999999999999 999999
Q ss_pred CCC
Q psy8260 386 PYL 388 (427)
Q Consensus 386 p~f 388 (427)
|||
T Consensus 248 ~~f 250 (250)
T cd05123 248 PFF 250 (250)
T ss_pred CCC
Confidence 998
No 347
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.6e-33 Score=266.24 Aligned_cols=254 Identities=20% Similarity=0.257 Sum_probs=183.4
Q ss_pred cCcceeeccccCcccccEEEEeEEeC----cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDS----VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
+...|.+...+|.|+||.||.+.... .+.+.||+|.+.... .......+.+|++++++++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 80 (275)
T cd05046 3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREA- 80 (275)
T ss_pred ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCC-
Confidence 34567788899999999999776432 245679999875432 223456688999999999999999999987543
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhhC----------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRTQ----------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~~----------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~ 206 (427)
...+++++++ +++|.+++... .+++..+..++.|++.||.|||+++|+||||||+|||++.++.
T Consensus 81 -----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~ 155 (275)
T cd05046 81 -----EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQRE 155 (275)
T ss_pred -----CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCc
Confidence 3468888888 68999988642 4899999999999999999999999999999999999999999
Q ss_pred EEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccc
Q psy8260 207 LKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 286 (427)
Q Consensus 207 ~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~ 286 (427)
++++|||+++....... ......
T Consensus 156 ~~l~~~~~~~~~~~~~~---------------------------------------------------------~~~~~~ 178 (275)
T cd05046 156 VKVSLLSLSKDVYNSEY---------------------------------------------------------YKLRNA 178 (275)
T ss_pred EEEcccccccccCcccc---------------------------------------------------------cccCCc
Confidence 99999998763221100 001122
Q ss_pred cccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHH
Q psy8260 287 VATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLL 365 (427)
Q Consensus 287 ~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi 365 (427)
.+++.|+|||.+.+......+|+||+|++++.+-+ +..+|.................... .....++.+.++|
T Consensus 179 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~i 252 (275)
T cd05046 179 LIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP------VPEGCPSRLYKLM 252 (275)
T ss_pred eeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCC------CCCCCCHHHHHHH
Confidence 34566888888776666677899999999876533 3333322111111111110010010 1234567899999
Q ss_pred HHhcCCCCCCCCCHHHHhcC
Q psy8260 366 SLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 366 ~~mL~~dP~~R~ta~e~L~H 385 (427)
.+||+.||.+|||+.|++++
T Consensus 253 ~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 253 TRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHHcCCCcccCCCHHHHHHH
Confidence 99999999999999999864
No 348
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.7e-33 Score=268.16 Aligned_cols=236 Identities=14% Similarity=0.151 Sum_probs=166.8
Q ss_pred ccCcccccEEEEeEEeC-----------------------cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCce
Q psy8260 71 TLSKESFDLIFSSALDS-----------------------VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVI 127 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~-----------------------~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv 127 (427)
.||+|+||.||.+.... .....||+|.+... .......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCee
Confidence 68999999999886532 12246899988542 222345577899999999999999
Q ss_pred eeeeeeecCccccCCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC
Q psy8260 128 GLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 204 (427)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~ 204 (427)
++++++... ...+++|||+ +++|..+++. +.+++..+..++.|++.||+|||++||+||||||+|||++..
T Consensus 80 ~~~~~~~~~------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 80 FVHGVCVRG------SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARL 153 (274)
T ss_pred eEEEEEEeC------CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEecc
Confidence 999987643 3467888888 6788888754 468999999999999999999999999999999999999754
Q ss_pred C-------CEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCC
Q psy8260 205 C-------ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLAR 277 (427)
Q Consensus 205 ~-------~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~ 277 (427)
+ .+|++|||++...... ...
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~-~~~---------------------------------------------------- 180 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR-EER---------------------------------------------------- 180 (274)
T ss_pred CcccCccceeeecCCccccccccc-ccc----------------------------------------------------
Confidence 3 4899999987532111 111
Q ss_pred CCccccccccccccccchHHhhh-ccCCCCCCHHHHHHHHHHh-CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcC
Q psy8260 278 PTENEMTGYVATRWYRAPEIMLN-WMHYNQTDIHQLNLIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFK 355 (427)
Q Consensus 278 ~~~~~~~~~~gt~~Y~APEvl~~-~~~~~~~d~~slg~i~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (427)
.++..|+|||++.+ ..+..++|+||+|++++.+ .++..++..... .....+....... ..
T Consensus 181 ---------~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~--------~~ 242 (274)
T cd05076 181 ---------VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP-SEKERFYEKKHRL--------PE 242 (274)
T ss_pred ---------ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh-HHHHHHHHhccCC--------CC
Confidence 23445666665543 2355677999999988765 233333332211 1111121111111 12
Q ss_pred CCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 356 GANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 356 ~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
..++++.+||.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 243 PSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 245789999999999999999999999975
No 349
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.6e-33 Score=266.39 Aligned_cols=251 Identities=17% Similarity=0.188 Sum_probs=178.7
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCc----EEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGV----KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~----~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
.+.|++.+.||+|+||.||.+.. ..+|. +||+|.+... .......++..|+.++++++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~-~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~--- 80 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIW-IPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG--- 80 (279)
T ss_pred HhhceeccccCccCCcceEEEEE-cCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC---
Confidence 45678889999999999997654 33443 5788877532 223334566788889999999999999998642
Q ss_pred ccCCceEEEEecc-CCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 139 LADFKNVYMVTHL-MGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 139 ~~~~~~~~lv~e~-~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...++++++ .+++|.+++.. ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++
T Consensus 81 ----~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~ 156 (279)
T cd05111 81 ----ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVA 156 (279)
T ss_pred ----CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccc
Confidence 123455555 57899998854 46899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+......... ......++..|+||
T Consensus 157 ~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~y~~p 180 (279)
T cd05111 157 DLLYPDDKKY--------------------------------------------------------FYSEHKTPIKWMAL 180 (279)
T ss_pred eeccCCCccc--------------------------------------------------------ccCCCCCcccccCH
Confidence 6432110000 00112355678888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+..+..++|+||+|++++.+.+ +..++... ......+.......... ....+.+..+++.+|+..||+
T Consensus 181 E~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~li~~c~~~~p~ 253 (279)
T cd05111 181 ESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGM-RPHEVPDLLEKGERLAQ------PQICTIDVYMVMVKCWMIDEN 253 (279)
T ss_pred HHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHCCCcCCC------CCCCCHHHHHHHHHHcCCCcc
Confidence 88877677778899999999987743 43333221 11112222221111110 122456788999999999999
Q ss_pred CCCCHHHHhcC
Q psy8260 375 KRITAEQALAH 385 (427)
Q Consensus 375 ~R~ta~e~L~H 385 (427)
+|||++|+++.
T Consensus 254 ~Rps~~el~~~ 264 (279)
T cd05111 254 VRPTFKELANE 264 (279)
T ss_pred cCcCHHHHHHH
Confidence 99999999763
No 350
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=8.9e-34 Score=267.21 Aligned_cols=251 Identities=22% Similarity=0.320 Sum_probs=180.0
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCc---CCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP---FQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~---~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
+|.+.+.||+|+||.||.+. +..++..+++|.++.. ........++.+|+.+++.++||||+++++++...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 74 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVK-DKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER----- 74 (260)
T ss_pred CceeeeeecCCCCceEEEEE-ecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC-----
Confidence 36778899999999999754 4455666666655432 11222334566899999999999999999887543
Q ss_pred CceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...+++++++ +++|..++.. ..+++..+..++.|++.||.|||++|++|+||||+||+++. +.+||+|||++
T Consensus 75 -~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~ 152 (260)
T cd08222 75 -DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVS 152 (260)
T ss_pred -CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCce
Confidence 3567888877 6788877642 46899999999999999999999999999999999999975 56999999987
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+....... ......|++.|+||
T Consensus 153 ~~~~~~~~----------------------------------------------------------~~~~~~~~~~~~~p 174 (260)
T cd08222 153 RLLMGSCD----------------------------------------------------------LATTFTGTPYYMSP 174 (260)
T ss_pred eecCCCcc----------------------------------------------------------cccCCCCCcCccCH
Confidence 64321100 00112356677888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEK 375 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~ 375 (427)
|.+.+..+..++|+|++|++++.+-++..++..........+...... .......++++.|||.+||+.||++
T Consensus 175 e~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~ 247 (260)
T cd08222 175 EALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPT-------PSLPETYSRQLNSIMQSMLNKDPSL 247 (260)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCC-------CCCcchhcHHHHHHHHHHhcCChhh
Confidence 877666666778999999999877555444432211111111111100 0112345789999999999999999
Q ss_pred CCCHHHHhcCCCC
Q psy8260 376 RITAEQALAHPYL 388 (427)
Q Consensus 376 R~ta~e~L~Hp~f 388 (427)
||+++|+++||||
T Consensus 248 Rp~~~~il~~~~~ 260 (260)
T cd08222 248 RPSAAEILRNPFI 260 (260)
T ss_pred CcCHHHHhhCCCC
Confidence 9999999999997
No 351
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.5e-33 Score=263.14 Aligned_cols=250 Identities=23% Similarity=0.317 Sum_probs=185.4
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
++....|.+.+.||.|+||.||++.. . .++.||||.+..... ....+.+|+.++++++||||+++++++...
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~-~-~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 73 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTW-N-GTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEE--- 73 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEE-c-CCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecC---
Confidence 56678899999999999999997653 3 457899998865332 234577899999999999999999987643
Q ss_pred cCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++
T Consensus 74 ---~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 74 ---EPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred ---CceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccc
Confidence 3468888877 6799988864 35899999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+........ ...+..++..|+||
T Consensus 151 ~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~~P 173 (261)
T cd05034 151 RLIEDDEYT---------------------------------------------------------AREGAKFPIKWTAP 173 (261)
T ss_pred eeccchhhh---------------------------------------------------------hhhccCCCccccCH
Confidence 643221000 00011234568888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|.+.+......+|+||+|++++.+-+ +..+|..........+....... ......++++.+++.+||+.||.
T Consensus 174 E~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~~p~ 246 (261)
T cd05034 174 EAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM-------PRPPNCPEELYDLMLQCWDKDPE 246 (261)
T ss_pred HHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------CCCCCCCHHHHHHHHHHcccCcc
Confidence 88877667777899999999877654 44444322111112222111110 11123467899999999999999
Q ss_pred CCCCHHHHhc
Q psy8260 375 KRITAEQALA 384 (427)
Q Consensus 375 ~R~ta~e~L~ 384 (427)
+|||++++.+
T Consensus 247 ~Rp~~~~l~~ 256 (261)
T cd05034 247 ERPTFEYLQS 256 (261)
T ss_pred cCCCHHHHHH
Confidence 9999999864
No 352
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.7e-33 Score=267.61 Aligned_cols=249 Identities=20% Similarity=0.283 Sum_probs=179.6
Q ss_pred eeeccccCcccccEEEEeEEeC----cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDS----VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
|.+.+.||+|+||.||++.... .....||+|.+... .......++.+|+.+++.++||||+++++.+...
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 75 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD----- 75 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC-CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-----
Confidence 5677899999999999875432 23356889887643 2344456788999999999999999999987643
Q ss_pred CceEEEEeccC-CCCHHHHHhh-------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRT-------------------------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~-------------------------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLK 195 (427)
...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||++||+|||||
T Consensus 76 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 76 -GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred -CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 3457777777 6889887753 236788889999999999999999999999999
Q ss_pred CCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCC
Q psy8260 196 PSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGL 275 (427)
Q Consensus 196 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~ 275 (427)
|+|||+++++.+||+|||+++........ .
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~-------------------~------------------------------- 184 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSY-------------------V------------------------------- 184 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccch-------------------h-------------------------------
Confidence 99999999999999999998643221100 0
Q ss_pred CCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhc
Q psy8260 276 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVF 354 (427)
Q Consensus 276 ~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (427)
......++..|+|||++.+..+...+|+||+|++++.|.+ +..+|.... .............. ...
T Consensus 185 ------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~------~~~ 251 (290)
T cd05045 185 ------KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA-PERLFNLLKTGYRM------ERP 251 (290)
T ss_pred ------cccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHhCCCCC------CCC
Confidence 0001123556888888777667778899999999877654 443342221 11111222111000 012
Q ss_pred CCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 355 KGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 355 ~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
...+.++.+||.+||+.||.+|||++|+++
T Consensus 252 ~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 252 ENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 346788999999999999999999999875
No 353
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.8e-33 Score=264.37 Aligned_cols=248 Identities=21% Similarity=0.247 Sum_probs=168.2
Q ss_pred cccCcccccEEEEeEEe-CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEE
Q psy8260 70 PTLSKESFDLIFSSALD-SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~-~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv 148 (427)
+.||+|+||.||.+... ......+|+|.+... ........+.+|+.+++.++||||+++++.+... ...|++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~------~~~~lv 73 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES------IPYLLV 73 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC------CceEEE
Confidence 35899999999987543 335567999987543 2333445677999999999999999999987643 457889
Q ss_pred eccC-CCCHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 149 THLM-GADLNNILRTQ------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 149 ~e~~-g~~L~~~l~~~------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
+|++ +++|.+++... ..++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 153 (269)
T cd05042 74 LEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE 153 (269)
T ss_pred EEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccc
Confidence 9888 68999988643 2457778899999999999999999999999999999999999999999998643211
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN- 300 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~- 300 (427)
.... ......+++.|+|||++..
T Consensus 154 ~~~~--------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 177 (269)
T cd05042 154 DYYI--------------------------------------------------------TKDCHAVPLRWLAPELVEIR 177 (269)
T ss_pred hhee--------------------------------------------------------ccCCCCCcccccCHHHHhhc
Confidence 0000 0001122344555555432
Q ss_pred ------ccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCC-CCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 301 ------WMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLP-LLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 301 ------~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
..+..++|+||+|++++.+-+ +..+|......+...+...... ..... ......++...+++..|+ .|
T Consensus 178 ~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~d 253 (269)
T cd05042 178 GQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKP---QLDLKYSDRWYEVMQFCW-LD 253 (269)
T ss_pred cccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCC---cccccCCHHHHHHHHHHh-cC
Confidence 123456799999999877643 3333322111112222221111 11111 122345778889998888 59
Q ss_pred CCCCCCHHHHhc
Q psy8260 373 SEKRITAEQALA 384 (427)
Q Consensus 373 P~~R~ta~e~L~ 384 (427)
|++|||++|+++
T Consensus 254 p~~Rpt~~~v~~ 265 (269)
T cd05042 254 PETRPTAEEVHE 265 (269)
T ss_pred cccccCHHHHHH
Confidence 999999999875
No 354
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.9e-33 Score=265.36 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=183.6
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCc--CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSV--SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~--~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
+....+.+.+.+|.|+||.||.+..... +...||||...... .....+.+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--- 78 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE--- 78 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC---
Confidence 4456688899999999999998765332 24568999875432 24455678899999999999999999998754
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...|++++++ +++|.+++... .+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++
T Consensus 79 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 79 ----NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred ----CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCcee
Confidence 2356777777 78999988653 4899999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+....... + ......+++.|+||
T Consensus 155 ~~~~~~~~-~--------------------------------------------------------~~~~~~~~~~y~aP 177 (270)
T cd05056 155 RYLEDESY-Y--------------------------------------------------------KASKGKLPIKWMAP 177 (270)
T ss_pred eecccccc-e--------------------------------------------------------ecCCCCccccccCh
Confidence 64322100 0 00011234568888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++....+...+|+||+|++++.+.+ +..+|................ .. ......++++.+||.+||..||.
T Consensus 178 E~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~li~~~l~~~P~ 250 (270)
T cd05056 178 ESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE-RL------PMPPNCPPTLYSLMTKCWAYDPS 250 (270)
T ss_pred hhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-cC------CCCCCCCHHHHHHHHHHcCCChh
Confidence 88776667778899999999876432 333332221111111111111 01 12245678999999999999999
Q ss_pred CCCCHHHHhcC
Q psy8260 375 KRITAEQALAH 385 (427)
Q Consensus 375 ~R~ta~e~L~H 385 (427)
+|||+.+++..
T Consensus 251 ~Rpt~~~~~~~ 261 (270)
T cd05056 251 KRPRFTELKAQ 261 (270)
T ss_pred hCcCHHHHHHH
Confidence 99999998864
No 355
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.1e-33 Score=262.69 Aligned_cols=255 Identities=22% Similarity=0.300 Sum_probs=184.4
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCc--CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSV--SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~--~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
+....|+..+.+|+|+||.||++..... ....||+|.+.... .......+.+|++++++++||||+++.+++...
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF-- 78 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC--
Confidence 3445678889999999999997665322 22479999886432 334456678999999999999999999987643
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
...|+++|++ +++|.+++.. ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++
T Consensus 79 ----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~ 154 (268)
T cd05063 79 ----KPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLS 154 (268)
T ss_pred ----CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccc
Confidence 4578888877 6789888864 45899999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
........... .......++.|+||
T Consensus 155 ~~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~y~~P 179 (268)
T cd05063 155 RVLEDDPEGTY-------------------------------------------------------TTSGGKIPIRWTAP 179 (268)
T ss_pred eecccccccce-------------------------------------------------------eccCCCcCceecCH
Confidence 64322110000 00011124568888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+..+..++|+||+|++++.+.+ +..||......+ ....+......+ .....+.++.+||.+||+.||.
T Consensus 180 E~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-~~~~i~~~~~~~------~~~~~~~~~~~li~~c~~~~p~ 252 (268)
T cd05063 180 EAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-VMKAINDGFRLP------APMDCPSAVYQLMLQCWQQDRA 252 (268)
T ss_pred HHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhcCCCCC------CCCCCCHHHHHHHHHHcCCCcc
Confidence 88877667778899999999987533 444443322111 111111111000 1123567889999999999999
Q ss_pred CCCCHHHHhc
Q psy8260 375 KRITAEQALA 384 (427)
Q Consensus 375 ~R~ta~e~L~ 384 (427)
+||+++++++
T Consensus 253 ~Rp~~~~i~~ 262 (268)
T cd05063 253 RRPRFVDIVN 262 (268)
T ss_pred cCcCHHHHHH
Confidence 9999999985
No 356
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.5e-33 Score=261.24 Aligned_cols=247 Identities=24% Similarity=0.354 Sum_probs=181.0
Q ss_pred eeccccCcccccEEEEeEEeCc---CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 67 DIGPTLSKESFDLIFSSALDSV---SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 67 ~~~~~lg~g~fg~v~~~~~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.+.+.+|.|+||.||.+..... ++..||+|.+.... .......+.+|+.+++.++|+||+++++++... .
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~ 74 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE------E 74 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC------C
Confidence 4678899999999997655432 24889999986543 222456778999999999999999999987653 3
Q ss_pred eEEEEeccC-CCCHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRTQK---LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~---l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..+++++++ +++|.+++.... +++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++...
T Consensus 75 ~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred eeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecc
Confidence 578888877 789998886432 8999999999999999999999999999999999999999999999999986443
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..... ......+++.|+|||.+.
T Consensus 155 ~~~~~---------------------------------------------------------~~~~~~~~~~y~~Pe~~~ 177 (258)
T smart00219 155 DDDYY---------------------------------------------------------KKKGGKLPIRWMAPESLK 177 (258)
T ss_pred ccccc---------------------------------------------------------ccccCCCcccccChHHhc
Confidence 22000 000112566788888887
Q ss_pred hccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
+..+..++|+|++|++++.+.+ +..++............. ..... ......+.++.++|.+||..||.+|||
T Consensus 178 ~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~i~~~l~~~p~~Rpt 250 (258)
T smart00219 178 DGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLK-KGYRL------PKPENCPPEIYKLMLQCWAEDPEDRPT 250 (258)
T ss_pred cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCC------CCCCcCCHHHHHHHHHHCcCChhhCcC
Confidence 6667778899999999876633 222332211111111111 11110 111236788999999999999999999
Q ss_pred HHHHhc
Q psy8260 379 AEQALA 384 (427)
Q Consensus 379 a~e~L~ 384 (427)
+.|+++
T Consensus 251 ~~~ll~ 256 (258)
T smart00219 251 FSELVE 256 (258)
T ss_pred HHHHHh
Confidence 999986
No 357
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.6e-33 Score=262.76 Aligned_cols=256 Identities=20% Similarity=0.270 Sum_probs=184.8
Q ss_pred CcceeeccccCcccccEEEEeEEeCc--CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSV--SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~--~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
.+.+++.+.||+|+||.||++..... ++..||||.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---- 77 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS---- 77 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC----
Confidence 35678899999999999997654322 23479999886542 344556788999999999999999999987643
Q ss_pred CCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
...++++|++ +++|.++++. +.+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.
T Consensus 78 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~ 155 (269)
T cd05065 78 --RPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 155 (269)
T ss_pred --CceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccc
Confidence 3568888887 6789988864 4589999999999999999999999999999999999999999999999998864
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
....... ..+. ...+...+..|+|||+
T Consensus 156 ~~~~~~~----~~~~-------------------------------------------------~~~~~~~~~~y~~PE~ 182 (269)
T cd05065 156 LEDDTSD----PTYT-------------------------------------------------SSLGGKIPIRWTAPEA 182 (269)
T ss_pred cccCccc----cccc-------------------------------------------------cccCCCcceeecCHhH
Confidence 3221100 0000 0001112456889998
Q ss_pred hhhccCCCCCCHHHHHHHHHHhC-CCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLG-TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
+.+..+...+|+||+|++++.+. .+..+|....... ..+........+ .....++.+.+++.+||+.||.+|
T Consensus 183 ~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-~~~~i~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~R 255 (269)
T cd05065 183 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-VINAIEQDYRLP------PPMDCPTALHQLMLDCWQKDRNAR 255 (269)
T ss_pred hccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-HHHHHHcCCcCC------CcccCCHHHHHHHHHHcCCChhhC
Confidence 88777777889999999987643 2434443322111 111111110000 112456788999999999999999
Q ss_pred CCHHHHhcC
Q psy8260 377 ITAEQALAH 385 (427)
Q Consensus 377 ~ta~e~L~H 385 (427)
||++++++.
T Consensus 256 p~~~~i~~~ 264 (269)
T cd05065 256 PKFGQIVST 264 (269)
T ss_pred cCHHHHHHH
Confidence 999999863
No 358
>KOG0587|consensus
Probab=100.00 E-value=4.6e-34 Score=291.03 Aligned_cols=265 Identities=20% Similarity=0.370 Sum_probs=201.9
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcccc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~ 140 (427)
..+.|+|-.++|+|.+|.||+ +.++++|+.+|||++..... ..+.+..|.++|+.+ .|||++.++++|..... .
T Consensus 17 p~d~~ei~evig~Gtygkv~k-~k~~~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~-~ 91 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYK-GRHVKTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP-G 91 (953)
T ss_pred CCCccEEEEEEeeccceeEEE-EeeeecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEecC-C
Confidence 456788899999999999995 67888999999998764322 223455688888876 79999999999864333 2
Q ss_pred CCceEEEEeccC-CCCHHHHHh---hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILR---TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~---~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
..+.+++|||+| ||+..++++ ..++.|..+..|++.++.||.+||.+.+||||+|-.|||++.++.|||+|||++.
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSA 171 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeee
Confidence 345789999999 578887775 4679999999999999999999999999999999999999999999999999987
Q ss_pred CCCC---CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 217 PTEN---EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 217 ~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
.... ...+.+||++|||||++.....++.
T Consensus 172 QldsT~grRnT~iGtP~WMAPEViac~e~~d~------------------------------------------------ 203 (953)
T KOG0587|consen 172 QLDSTVGRRNTFIGTPYWMAPEVIACDESPDA------------------------------------------------ 203 (953)
T ss_pred eeecccccccCcCCCcccccceeeecccCCCC------------------------------------------------
Confidence 6543 3456788888888888754221111
Q ss_pred chHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 294 APEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 294 APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
.|...+|+||||++.-+||-+++|+.+--. .+..+ ..|.-++..+ ..+...+.++.|||+.||..|-
T Consensus 204 --------tyd~R~D~WsLGITaIEladG~PPl~DmHP---mraLF-~IpRNPPPkL-krp~kWs~~FndFIs~cL~Kd~ 270 (953)
T KOG0587|consen 204 --------TYDYRSDLWSLGITAIEMAEGAPPLCDMHP---MRALF-LIPRNPPPKL-KRPKKWSKKFNDFISTCLVKDY 270 (953)
T ss_pred --------CcccccchhhccceeehhcCCCCCccCcch---hhhhc-cCCCCCCccc-cchhhHHHHHHHHHHHHHhhcc
Confidence 144457999999999999888877654321 12111 1221111111 1123447788999999999999
Q ss_pred CCCCCHHHHhcCCCCCCCC
Q psy8260 374 EKRITAEQALAHPYLSQYS 392 (427)
Q Consensus 374 ~~R~ta~e~L~Hp~f~~~~ 392 (427)
.+||+..++|+|||+.+..
T Consensus 271 e~RP~~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 271 EQRPSTEELLKHPFITEQP 289 (953)
T ss_pred ccCcchhhhccCCcccccc
Confidence 9999999999999998543
No 359
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7.2e-33 Score=261.19 Aligned_cols=249 Identities=20% Similarity=0.248 Sum_probs=175.0
Q ss_pred cccCcccccEEEEeEEeC--cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDS--VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~--~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||+|+||.||++.... ..+..||||.+... ........+.+|+.+++.++||||+++++++... ....++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~~l 74 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-----EGSPLV 74 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-----CCCcEE
Confidence 368999999999876432 24567999987532 2334456678999999999999999999875432 133567
Q ss_pred EeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccc
Q psy8260 148 VTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTG 224 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 224 (427)
+++++ +++|.+++.. ...++..+..++.|++.||.|||+++++||||||+|||++.++.+||+|||+++........
T Consensus 75 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 75 VLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 77776 7899998864 34677788889999999999999999999999999999999999999999998643221100
Q ss_pred ccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCC
Q psy8260 225 YVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHY 304 (427)
Q Consensus 225 ~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~ 304 (427)
.+ ....+..++..|+|||++.+..+.
T Consensus 155 --------~~----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~ 180 (262)
T cd05058 155 --------SV----------------------------------------------HNHTGAKLPVKWMALESLQTQKFT 180 (262)
T ss_pred --------ee----------------------------------------------cccccCcCCccccChhHhccCccc
Confidence 00 000112345678888888776677
Q ss_pred CCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHh
Q psy8260 305 NQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQAL 383 (427)
Q Consensus 305 ~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L 383 (427)
.++|+||+|++++.+.+ +..++... ................ .....++.+.+++.+||+.||++|||+.|++
T Consensus 181 ~~~Di~slG~~l~el~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il 253 (262)
T cd05058 181 TKSDVWSFGVLLWELMTRGAPPYPDV-DSFDITVYLLQGRRLL------QPEYCPDPLYEVMLSCWHPKPEMRPTFSELV 253 (262)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHhcCCCCC------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 78899999999987733 22222211 1111111111110000 0123467899999999999999999999998
Q ss_pred cC
Q psy8260 384 AH 385 (427)
Q Consensus 384 ~H 385 (427)
+.
T Consensus 254 ~~ 255 (262)
T cd05058 254 SR 255 (262)
T ss_pred HH
Confidence 64
No 360
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.6e-33 Score=261.53 Aligned_cols=250 Identities=21% Similarity=0.276 Sum_probs=184.5
Q ss_pred ccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
+++..+.+.+.+.+|+|+||.||.+.. ..+..||+|.+... ......+.+|+++++.++|+||+++++.+..
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~--~~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 72 (260)
T cd05073 1 WEIPRESLKLEKKLGAGQFGEVWMATY--NKHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--- 72 (260)
T ss_pred CcccccceeEEeEecCccceEEEEEEe--cCCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC---
Confidence 366778899999999999999997653 34567999987643 2334567889999999999999999988754
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGl 214 (427)
...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||+
T Consensus 73 ----~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~ 148 (260)
T cd05073 73 ----EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGL 148 (260)
T ss_pred ----CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcc
Confidence 2468888887 6799988864 2478888999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
+......... ...+..++..|+|
T Consensus 149 ~~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~~ 171 (260)
T cd05073 149 ARVIEDNEYT---------------------------------------------------------AREGAKFPIKWTA 171 (260)
T ss_pred eeeccCCCcc---------------------------------------------------------cccCCcccccccC
Confidence 8643211000 0011224566888
Q ss_pred hHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 295 PEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 295 PEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
||++....+...+|+|++|++++.+-+ +..+|.......... ........ ......+.++.+++.+||+.||
T Consensus 172 PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~i~~~l~~~p 244 (260)
T cd05073 172 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-ALERGYRM------PRPENCPEELYNIMMRCWKNRP 244 (260)
T ss_pred HhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHhCCCCC------CCcccCCHHHHHHHHHHcccCc
Confidence 888876666777899999999876654 444443221111111 11111111 1123467889999999999999
Q ss_pred CCCCCHHHHhc
Q psy8260 374 EKRITAEQALA 384 (427)
Q Consensus 374 ~~R~ta~e~L~ 384 (427)
++|||+.++++
T Consensus 245 ~~Rp~~~~l~~ 255 (260)
T cd05073 245 EERPTFEYIQS 255 (260)
T ss_pred ccCcCHHHHHH
Confidence 99999998864
No 361
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=7.7e-33 Score=260.22 Aligned_cols=246 Identities=22% Similarity=0.239 Sum_probs=180.2
Q ss_pred cccCcccccEEEEeEEeCcCC--cEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSG--VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g--~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.||.|++|.||++......+ ..||||.+...... ...+.+.+|++++++++||||+++++++.. ...++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~ 72 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-------HPLMM 72 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-------CeEEE
Confidence 368999999999876644344 36999998765432 455678899999999999999999998754 34688
Q ss_pred EeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc
Q psy8260 148 VTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMT 223 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~ 223 (427)
++|++ +++|.+.+... .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.......
T Consensus 73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 73 VTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred EEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc
Confidence 88887 78999888653 488999999999999999999999999999999999999999999999999875432110
Q ss_pred cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccC
Q psy8260 224 GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 303 (427)
Q Consensus 224 ~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~ 303 (427)
. | . ......++..|+|||++.+..+
T Consensus 153 ~------~------------~-------------------------------------~~~~~~~~~~y~~pE~~~~~~~ 177 (257)
T cd05040 153 H------Y------------V-------------------------------------MEEHLKVPFAWCAPESLRTRTF 177 (257)
T ss_pred c------e------------e-------------------------------------cccCCCCCceecCHHHhcccCc
Confidence 0 0 0 0001235667889998877777
Q ss_pred CCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 304 YNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 304 ~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
...+|+||+|++++.+-+ +..++......+............. .....+.++.+|+.+||+.||++|||++|+
T Consensus 178 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 251 (257)
T cd05040 178 SHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE------RPEACPQDIYNVMLQCWAHNPADRPTFAAL 251 (257)
T ss_pred CchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC------CCccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence 788999999999987733 3333321111111111111111110 112356789999999999999999999998
Q ss_pred hc
Q psy8260 383 LA 384 (427)
Q Consensus 383 L~ 384 (427)
++
T Consensus 252 ~~ 253 (257)
T cd05040 252 RE 253 (257)
T ss_pred HH
Confidence 75
No 362
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.6e-33 Score=265.49 Aligned_cols=237 Identities=12% Similarity=0.170 Sum_probs=168.4
Q ss_pred cccCcccccEEEEeEEeC------cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 70 PTLSKESFDLIFSSALDS------VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~------~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.||.|+||.||++.... .....||+|.+... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~------~ 72 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG------D 72 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC------C
Confidence 368999999999765432 12345888877532 223345677899999999999999999998653 3
Q ss_pred eEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCC--------EEEeeC
Q psy8260 144 NVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE--------LKILDF 212 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~--------~kl~DF 212 (427)
..++++|++ +++|..+++.. .+++..+..++.||+.||.|||++||+||||||+|||++.++. +|++||
T Consensus 73 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 73 ESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred CcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccc
Confidence 467888888 67999988653 4899999999999999999999999999999999999987654 688898
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
|++...... .. ..+++.|
T Consensus 153 g~~~~~~~~-~~-------------------------------------------------------------~~~~~~y 170 (258)
T cd05078 153 GISITVLPK-EI-------------------------------------------------------------LLERIPW 170 (258)
T ss_pred ccccccCCc-hh-------------------------------------------------------------ccccCCc
Confidence 876532211 11 1244556
Q ss_pred cchHHhhhc-cCCCCCCHHHHHHHHHHhCCCC-HHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcC
Q psy8260 293 RAPEIMLNW-MHYNQTDIHQLNLIMEMLGTPP-AEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLE 370 (427)
Q Consensus 293 ~APEvl~~~-~~~~~~d~~slg~i~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~ 370 (427)
+|||++.+. .+...+|+||+|++++.+.++. .++.. ............... .....++++.+||.+||+
T Consensus 171 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~ 241 (258)
T cd05078 171 VPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSA-LDSQKKLQFYEDRHQ--------LPAPKWTELANLINQCMD 241 (258)
T ss_pred cCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhh-ccHHHHHHHHHcccc--------CCCCCcHHHHHHHHHHhc
Confidence 666666542 3455689999999998775542 22221 111111111111111 112345788999999999
Q ss_pred CCCCCCCCHHHHhcC
Q psy8260 371 LDSEKRITAEQALAH 385 (427)
Q Consensus 371 ~dP~~R~ta~e~L~H 385 (427)
.||++|||++++++.
T Consensus 242 ~~p~~Rps~~~il~~ 256 (258)
T cd05078 242 YEPDFRPSFRAIIRD 256 (258)
T ss_pred cChhhCCCHHHHHHh
Confidence 999999999999864
No 363
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.3e-33 Score=266.60 Aligned_cols=248 Identities=21% Similarity=0.341 Sum_probs=179.3
Q ss_pred eeccccCcccccEEEEeEEe---CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 67 DIGPTLSKESFDLIFSSALD---SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 67 ~~~~~lg~g~fg~v~~~~~~---~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.+.+.||.|.||.||.+.+. ...+..||||.+.. .......+.+.+|++.+++++||||+++++++... .
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~------~ 74 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN------E 74 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS------S
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeeccccccccccccccccccccccc------c
Confidence 45678999999999988876 23467899999854 33445577889999999999999999999998632 3
Q ss_pred eEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
..++++|++ +++|.+++... .+++.....++.||+.||.|||+++++|+||+++|||++.++.+||+|||+++...
T Consensus 75 ~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~ 154 (259)
T PF07714_consen 75 PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPIS 154 (259)
T ss_dssp SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 477888887 58999988765 69999999999999999999999999999999999999999999999999986441
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..... .......+...|+|||++.
T Consensus 155 ~~~~~--------------------------------------------------------~~~~~~~~~~~~~aPE~~~ 178 (259)
T PF07714_consen 155 EKSKY--------------------------------------------------------KNDSSQQLPLRYLAPEVLK 178 (259)
T ss_dssp TSSSE--------------------------------------------------------EESTTSESGGGGS-HHHHH
T ss_pred ccccc--------------------------------------------------------ccccccccccccccccccc
Confidence 11000 0011123456788888888
Q ss_pred hccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
+..+..++|+||+|++++++-+ +..++......+...+. ..... .......+....++|.+|+..||.+|||
T Consensus 179 ~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~li~~C~~~~p~~RPs 251 (259)
T PF07714_consen 179 DGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-KQGQR------LPIPDNCPKDIYSLIQQCWSHDPEKRPS 251 (259)
T ss_dssp HSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-HTTEE------TTSBTTSBHHHHHHHHHHT-SSGGGS--
T ss_pred cccccccccccccccccccccccccccccccccccccccc-ccccc------ceeccchhHHHHHHHHHHcCCChhhCcC
Confidence 7777778899999999877755 44444332211212222 11111 0112345778899999999999999999
Q ss_pred HHHHhc
Q psy8260 379 AEQALA 384 (427)
Q Consensus 379 a~e~L~ 384 (427)
++++++
T Consensus 252 ~~~i~~ 257 (259)
T PF07714_consen 252 FQEILQ 257 (259)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999975
No 364
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.2e-33 Score=260.68 Aligned_cols=247 Identities=20% Similarity=0.279 Sum_probs=180.8
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
..+.+.+.+|.|+||.||++... .+..+|+|.+...... ...+.+|++++++++||||+++++++... .
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~--~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~ 72 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL--EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTER------S 72 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe--CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccC------C
Confidence 45778899999999999976542 4678999988654332 23577899999999999999999987543 3
Q ss_pred eEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..+++++++ +++|.+++.. ..+++..+..++.|++.||+|||+++++||||||+||+++.++.+||+|||+++....
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 152 (256)
T cd05112 73 PICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLD 152 (256)
T ss_pred ceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeeccc
Confidence 567888877 6789888864 3589999999999999999999999999999999999999999999999998764321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
.... ...+..++..|+|||++.+
T Consensus 153 ~~~~---------------------------------------------------------~~~~~~~~~~~~aPe~~~~ 175 (256)
T cd05112 153 DQYT---------------------------------------------------------SSTGTKFPVKWSSPEVFSF 175 (256)
T ss_pred Cccc---------------------------------------------------------ccCCCccchhhcCHhHhcc
Confidence 1000 0012234567888888776
Q ss_pred ccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH
Q psy8260 301 WMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA 379 (427)
Q Consensus 301 ~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta 379 (427)
..+...+|+||+|++++.+-+ +..+|................... .....+..+.+|+.+||+.||++|||+
T Consensus 176 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 248 (256)
T cd05112 176 SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLY-------KPRLASQSVYELMQHCWKERPEDRPSF 248 (256)
T ss_pred CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCC-------CCCCCCHHHHHHHHHHcccChhhCCCH
Confidence 667777899999999877643 333443221111111111100000 012246789999999999999999999
Q ss_pred HHHhcC
Q psy8260 380 EQALAH 385 (427)
Q Consensus 380 ~e~L~H 385 (427)
+|++++
T Consensus 249 ~~~l~~ 254 (256)
T cd05112 249 SLLLHQ 254 (256)
T ss_pred HHHHHh
Confidence 999874
No 365
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.2e-32 Score=257.87 Aligned_cols=242 Identities=21% Similarity=0.302 Sum_probs=177.2
Q ss_pred ccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEec
Q psy8260 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTH 150 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e 150 (427)
.||.|+||.||.+.. .++..||+|.+.... .......+.+|+++++.++||||+++++++... ...++++|
T Consensus 2 ~ig~g~~g~vy~~~~--~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e 72 (250)
T cd05085 2 LLGKGNFGEVFKGTL--KDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQR------QPIYIVME 72 (250)
T ss_pred ccCCCCCceEEEEEe--cCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC------CccEEEEE
Confidence 689999999998753 367899999886543 333445678999999999999999999987643 34688888
Q ss_pred cC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccc
Q psy8260 151 LM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA 227 (427)
Q Consensus 151 ~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~g 227 (427)
++ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.........
T Consensus 73 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-- 150 (250)
T cd05085 73 LVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS-- 150 (250)
T ss_pred CCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccccc--
Confidence 77 7899888754 357899999999999999999999999999999999999999999999999886422110000
Q ss_pred cccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCC
Q psy8260 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQT 307 (427)
Q Consensus 228 t~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~ 307 (427)
.....+++.|+|||++.+..+..++
T Consensus 151 -------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~ 175 (250)
T cd05085 151 -------------------------------------------------------SGLKQIPIKWTAPEALNYGRYSSES 175 (250)
T ss_pred -------------------------------------------------------CCCCCCcccccCHHHhccCCCCchh
Confidence 0001234568888887766667778
Q ss_pred CHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcC
Q psy8260 308 DIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAH 385 (427)
Q Consensus 308 d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~H 385 (427)
|+||+|++++.+.+ +..||...... ............ ......++++.+|+.+||..||.+|||+.|+++.
T Consensus 176 Di~slG~ll~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 176 DVWSYGILLWETFSLGVCPYPGMTNQ-QAREQVEKGYRM------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHH-HHHHHHHcCCCC------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 99999999887643 33334222111 111111111110 1123467899999999999999999999999753
No 366
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.2e-32 Score=257.92 Aligned_cols=243 Identities=21% Similarity=0.295 Sum_probs=177.8
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEe
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~ 149 (427)
+.||.|+||.||.+.. .. ++.||+|.+..... ......+.+|++++++++||||+++++++... ...++++
T Consensus 1 ~~lg~g~~g~v~~~~~-~~-~~~v~~K~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~~~v~ 71 (251)
T cd05041 1 EKIGKGNFGDVYKGVL-KG-NTEVAVKTCRSTLP-PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK------QPIYIVM 71 (251)
T ss_pred CccccCCCceEEEEEE-eC-CCcEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC------CCeEEEE
Confidence 3689999999997654 44 89999998865433 23456678999999999999999999987654 3567888
Q ss_pred ccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCccccc
Q psy8260 150 HLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYV 226 (427)
Q Consensus 150 e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 226 (427)
+++ +++|.+++.. ..+++..+..++.|++.||.|||+++++||||||+|||++.++.+||+|||+++.........
T Consensus 72 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~- 150 (251)
T cd05041 72 ELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV- 150 (251)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCccee-
Confidence 877 7889888854 357888999999999999999999999999999999999999999999999986432111000
Q ss_pred ccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCC
Q psy8260 227 ATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ 306 (427)
Q Consensus 227 gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~ 306 (427)
......++..|+|||++.+..+...
T Consensus 151 -------------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~ 175 (251)
T cd05041 151 -------------------------------------------------------SDGLKQIPIKWTAPEALNYGRYTSE 175 (251)
T ss_pred -------------------------------------------------------ccccCcceeccCChHhhccCCCCcc
Confidence 0001123456888888776667778
Q ss_pred CCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 307 TDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 307 ~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
+|+||+|++++.+-+ +..+|..... .............. .....+.+..|||.+||+.||.+|||++|+++
T Consensus 176 ~Di~slG~i~~~l~t~~~~p~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 176 SDVWSYGILLWETFSLGDTPYPGMSN-QQTRERIESGYRMP------APQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred hhHHHHHHHHHHHHhccCCCCccCCH-HHHHHHHhcCCCCC------CCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 899999999987654 3333322111 11111111111110 12345778999999999999999999999986
No 367
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.2e-32 Score=260.68 Aligned_cols=251 Identities=21% Similarity=0.259 Sum_probs=182.5
Q ss_pred cCcceeeccccCcccccEEEEeEEeCcCC----cEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 62 CRGVIDIGPTLSKESFDLIFSSALDSVSG----VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 62 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~g----~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
..+.|.+.+.||+|+||.||++... .+| ..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 80 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWI-PEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS-- 80 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEe-cCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--
Confidence 3467888999999999999976643 233 368999876542 34445667899999999999999999998754
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 214 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGl 214 (427)
...+++++++ +++|.+.+.. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 81 -----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~ 155 (279)
T cd05057 81 -----SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGL 155 (279)
T ss_pred -----CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcc
Confidence 2467777776 7899988865 3589999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
++......... ...+..++..|+|
T Consensus 156 ~~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~y~~ 179 (279)
T cd05057 156 AKLLDVDEKEY--------------------------------------------------------HAEGGKVPIKWMA 179 (279)
T ss_pred cccccCcccce--------------------------------------------------------ecCCCcccccccC
Confidence 87543211000 0001123456888
Q ss_pred hHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 295 PEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 295 PEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
||.+....+...+|+|++|++++.+-+ +..+|.... .............. ......+.++.++|.+||..||
T Consensus 180 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~p 252 (279)
T cd05057 180 LESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-AVEIPDLLEKGERL------PQPPICTIDVYMVLVKCWMIDA 252 (279)
T ss_pred HHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-HHHHHHHHhCCCCC------CCCCCCCHHHHHHHHHHcCCCh
Confidence 888876667778899999999877543 333332221 11111111111111 1112356788999999999999
Q ss_pred CCCCCHHHHhc
Q psy8260 374 EKRITAEQALA 384 (427)
Q Consensus 374 ~~R~ta~e~L~ 384 (427)
.+|||+.++++
T Consensus 253 ~~Rp~~~~l~~ 263 (279)
T cd05057 253 ESRPTFKELIN 263 (279)
T ss_pred hhCCCHHHHHH
Confidence 99999999864
No 368
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.7e-32 Score=260.27 Aligned_cols=240 Identities=21% Similarity=0.284 Sum_probs=173.8
Q ss_pred ccCcccccEEEEeEEeCcCCc--EEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCceEEE
Q psy8260 71 TLSKESFDLIFSSALDSVSGV--KVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~~~g~--~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
.||+|+||.||.+.. ..++. .+|+|.+... ........+.+|+++++++ +||||+++++++... ...|+
T Consensus 2 ~lg~g~~g~v~~~~~-~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~------~~~~l 73 (270)
T cd05047 2 VIGEGNFGQVLKARI-KKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR------GYLYL 73 (270)
T ss_pred cCCCCCCceEEEEEE-cCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC------CCceE
Confidence 589999999997654 34554 5788887632 2334445677899999999 899999999988653 34688
Q ss_pred EeccC-CCCHHHHHhhC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEE
Q psy8260 148 VTHLM-GADLNNILRTQ-----------------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~~-----------------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl 209 (427)
+++++ +++|.+++... .+++..+..++.|++.||+|||++|++||||||+|||++.++.+||
T Consensus 74 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl 153 (270)
T cd05047 74 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 153 (270)
T ss_pred EEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEE
Confidence 88877 78999888542 3788899999999999999999999999999999999999999999
Q ss_pred eeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccc
Q psy8260 210 LDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 289 (427)
Q Consensus 210 ~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt 289 (427)
+|||+++........ .....+
T Consensus 154 ~dfgl~~~~~~~~~~-----------------------------------------------------------~~~~~~ 174 (270)
T cd05047 154 ADFGLSRGQEVYVKK-----------------------------------------------------------TMGRLP 174 (270)
T ss_pred CCCCCccccchhhhc-----------------------------------------------------------cCCCCc
Confidence 999987521100000 001124
Q ss_pred ccccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHh
Q psy8260 290 RWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLM 368 (427)
Q Consensus 290 ~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~m 368 (427)
..|+|||++....+..++|+||+|++++.+.+ +..+|............. ..... ......+.++.+||.+|
T Consensus 175 ~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~li~~~ 247 (270)
T cd05047 175 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRL------EKPLNCDDEVYDLMRQC 247 (270)
T ss_pred cccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHh-CCCCC------CCCCcCCHHHHHHHHHH
Confidence 56888888877667778899999999877743 444443221111111111 10000 11223577899999999
Q ss_pred cCCCCCCCCCHHHHhc
Q psy8260 369 LELDSEKRITAEQALA 384 (427)
Q Consensus 369 L~~dP~~R~ta~e~L~ 384 (427)
|..||.+|||++|+++
T Consensus 248 l~~~p~~Rps~~~il~ 263 (270)
T cd05047 248 WREKPYERPSFAQILV 263 (270)
T ss_pred cccChhhCCCHHHHHH
Confidence 9999999999999975
No 369
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.9e-32 Score=259.68 Aligned_cols=248 Identities=17% Similarity=0.193 Sum_probs=168.0
Q ss_pred cccCcccccEEEEeEEe-CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEE
Q psy8260 70 PTLSKESFDLIFSSALD-SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~-~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv 148 (427)
+.||+|+||.||.+... ..++..+|+|.+.... .......+.+|+.++++++||||+++++++... ..++++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~lv 73 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA-SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV------TPYLLV 73 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC------CCcEEE
Confidence 35899999999987653 4567789999886543 233344677899999999999999999987543 346888
Q ss_pred eccC-CCCHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 149 THLM-GADLNNILRTQ------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 149 ~e~~-g~~L~~~l~~~------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
+|++ +++|.+++... ..++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.....
T Consensus 74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc
Confidence 8887 68999888532 3466778889999999999999999999999999999999999999999998643221
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.... ......|++.|+|||++.+.
T Consensus 154 ~~~~--------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 177 (269)
T cd05087 154 DYYV--------------------------------------------------------TPDQLWVPLRWIAPELVDEV 177 (269)
T ss_pred ceee--------------------------------------------------------cCCCcCCcccccCHhHhccc
Confidence 1000 00011234445555554321
Q ss_pred -------cCCCCCCHHHHHHHHHHhC-CCCHHHHhhcCcHHHHHHHhc-CCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 302 -------MHYNQTDIHQLNLIMEMLG-TPPAEFMAKISSDSARKYINS-LPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 302 -------~~~~~~d~~slg~i~~~lg-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
.+..++|+||+|++++.+. .+..||......+........ ....... ......++...+++.+|+ .|
T Consensus 178 ~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~c~-~~ 253 (269)
T cd05087 178 HGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKP---RLKLPLSDRWYEVMQFCW-LQ 253 (269)
T ss_pred cccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCC---ccCCCCChHHHHHHHHHh-cC
Confidence 1345679999999887653 233333221111111111111 1111110 111235678899999998 69
Q ss_pred CCCCCCHHHHhc
Q psy8260 373 SEKRITAEQALA 384 (427)
Q Consensus 373 P~~R~ta~e~L~ 384 (427)
|.+|||++|++.
T Consensus 254 P~~Rpt~~~l~~ 265 (269)
T cd05087 254 PEQRPSAEEVHL 265 (269)
T ss_pred cccCCCHHHHHH
Confidence 999999999874
No 370
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.6e-33 Score=282.91 Aligned_cols=288 Identities=20% Similarity=0.266 Sum_probs=181.9
Q ss_pred ccCcceeeccccCcccccEEEEeEE---------------eCcCCcEEEEEEccCcCCCHH------------HHHHHHH
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSAL---------------DSVSGVKVAIKKIARPFQSAV------------HAKRTYR 113 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~---------------~~~~g~~vAvK~i~~~~~~~~------------~~~~~~~ 113 (427)
...+.|.+.+.||+|+||.||++.. +...++.||||++........ ..+....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 3567899999999999999998753 123457899999864321110 0112234
Q ss_pred HHHHHhcCCCCCc-----eeeeeeeecCc--cccCCceEEEEeccC-CCCHHHHHhhC----------------------
Q psy8260 114 ELRMLKHMNHENV-----IGLLDVFHSNT--CLADFKNVYMVTHLM-GADLNNILRTQ---------------------- 163 (427)
Q Consensus 114 Ei~~l~~l~HpnI-----v~l~~~~~~~~--~~~~~~~~~lv~e~~-g~~L~~~l~~~---------------------- 163 (427)
|+.++.+++|.|+ +++++++.... ........++|++|+ +++|.+++...
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 7777777777654 56666654321 011124578888888 67888776531
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC--ccc--ccccccccchhh
Q psy8260 164 ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE--MTG--YVATRWYRAPEI 236 (427)
Q Consensus 164 ---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~--~~~--~~gt~~y~aPE~ 236 (427)
.+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++..... ... ..+|+.|+|||+
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE 381 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence 2345678889999999999999999999999999999999999999999999754321 112 234789999999
Q ss_pred hhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHH
Q psy8260 237 MLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIM 316 (427)
Q Consensus 237 l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~ 316 (427)
+.....+... +.+ .+....+|... ........|+||+|+++
T Consensus 382 l~~~~~~~~~-------~~~-------------------------------~~~~~l~~~~~-~yg~~~~~DvwSlGvil 422 (507)
T PLN03224 382 LVMPQSCPRA-------PAP-------------------------------AMAALLSPFAW-LYGRPDLFDSYTAGVLL 422 (507)
T ss_pred hcCCCCCCcc-------chh-------------------------------hhhhhhhhhHH-hcCCCCccchhhHHHHH
Confidence 8642111100 000 00001111111 01122346999999999
Q ss_pred HHhCCCCH-HHHh------hcC--cHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC---CCCCCHHHHhc
Q psy8260 317 EMLGTPPA-EFMA------KIS--SDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS---EKRITAEQALA 384 (427)
Q Consensus 317 ~~lg~~~~-~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP---~~R~ta~e~L~ 384 (427)
+.|.++.. ++.. ... ......+..... ....+ ..++..++.++|||.+||+.|| .+|+|++|+|+
T Consensus 423 ~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~--~~~~~-~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 423 MQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG--QKYDF-SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred HHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc--cCCCc-ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 88866532 2211 000 000001100000 01111 1355678999999999999876 68999999999
Q ss_pred CCCCCC
Q psy8260 385 HPYLSQ 390 (427)
Q Consensus 385 Hp~f~~ 390 (427)
||||..
T Consensus 500 Hp~f~~ 505 (507)
T PLN03224 500 HRFFLP 505 (507)
T ss_pred CCCcCC
Confidence 999964
No 371
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.1e-32 Score=258.96 Aligned_cols=240 Identities=23% Similarity=0.342 Sum_probs=177.0
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|.+.+.+|+|+||.||.+. .+++.||+|.+.... ....+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~---~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 71 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE---YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN------ 71 (254)
T ss_pred HHHceeeeeeccCCCCceEecc---cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC------
Confidence 3568899999999999999653 478889999885421 234577899999999999999999987542
Q ss_pred ceEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
..+++++++ +++|.+++... .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++...
T Consensus 72 -~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 72 -GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVG 150 (254)
T ss_pred -CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceec
Confidence 357888877 68999988642 4789999999999999999999999999999999999999999999999988642
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
....... ..+..|+|||++
T Consensus 151 ~~~~~~~-------------------------------------------------------------~~~~~y~~pe~~ 169 (254)
T cd05083 151 SMGVDNS-------------------------------------------------------------KLPVKWTAPEAL 169 (254)
T ss_pred cccCCCC-------------------------------------------------------------CCCceecCHHHh
Confidence 2111111 123457777776
Q ss_pred hhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
.+..+..++|+||+|++++.+.+ +..+|.... .............. ......++++.+||.+||+.||.+||
T Consensus 170 ~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp 242 (254)
T cd05083 170 KHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-LKEVKECVEKGYRM------EPPEGCPADVYVLMTSCWETEPKKRP 242 (254)
T ss_pred ccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-HHHHHHHHhCCCCC------CCCCcCCHHHHHHHHHHcCCChhhCc
Confidence 66566677899999999877632 233332211 11111111111100 01234678899999999999999999
Q ss_pred CHHHHhc
Q psy8260 378 TAEQALA 384 (427)
Q Consensus 378 ta~e~L~ 384 (427)
|++++++
T Consensus 243 ~~~~l~~ 249 (254)
T cd05083 243 SFHKLRE 249 (254)
T ss_pred CHHHHHH
Confidence 9999875
No 372
>KOG4250|consensus
Probab=100.00 E-value=7.4e-34 Score=284.50 Aligned_cols=253 Identities=24% Similarity=0.328 Sum_probs=181.6
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.|...+.||+|+||.||.+ .++.||+.||||..+... .....++..+|+++|++++|||||+++++=++....-...
T Consensus 13 y~W~~~e~LG~Ga~g~V~rg-rnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRG-RNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred cceeehhhhcCCccceeeee-cccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 45677789999999999964 578899999999887543 3344566789999999999999999998854432111123
Q ss_pred eEEEEeccC-CCCHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc--CCC--CEEEeeCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRT----QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN--EDC--ELKILDFGL 214 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~----~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~--~~~--~~kl~DFGl 214 (427)
.-.++|||| ||+|...++. .++++.+...+...++.||.|||++||+||||||.||++- .+| .-||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 345666666 8999999964 4799999999999999999999999999999999999973 334 479999999
Q ss_pred CCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccc
Q psy8260 215 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 294 (427)
Q Consensus 215 a~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~A 294 (427)
||...+.. ...+..||+.|.+
T Consensus 171 Arel~d~s-----------------------------------------------------------~~~S~vGT~~YLh 191 (732)
T KOG4250|consen 171 ARELDDNS-----------------------------------------------------------LFTSLVGTEEYLH 191 (732)
T ss_pred cccCCCCC-----------------------------------------------------------eeeeecCchhhcC
Confidence 98654431 2334567777777
Q ss_pred hHHhhh-ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcH----HHHHHHhcCCCC----------CcccHHhhcC---C
Q psy8260 295 PEIMLN-WMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSD----SARKYINSLPLL----------TKKDFRQVFK---G 356 (427)
Q Consensus 295 PEvl~~-~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~----~~~~~~~~~~~~----------~~~~~~~~~~---~ 356 (427)
||+... ..+...+|.||+|+++|.+.|+..||...-... .....+...+.. .+..|+..++ .
T Consensus 192 Pel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~ 271 (732)
T KOG4250|consen 192 PELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNH 271 (732)
T ss_pred hHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCccc
Confidence 777763 455566799999999999999988886543221 111111111110 0111222221 1
Q ss_pred CCh----hHHHHHHHhcCCCCCCCC
Q psy8260 357 ANP----QAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 357 ~s~----~~~dLi~~mL~~dP~~R~ 377 (427)
.++ ..-..|..||..||.+|.
T Consensus 272 Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 272 LSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred ccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 222 334788899999999999
No 373
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.3e-32 Score=258.75 Aligned_cols=233 Identities=18% Similarity=0.195 Sum_probs=165.8
Q ss_pred cccCcccccEEEEeEEeCcCC----------cEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccc
Q psy8260 70 PTLSKESFDLIFSSALDSVSG----------VKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g----------~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 139 (427)
+.||+|+||.||++.... ++ ..||+|.+.... .....+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~-~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRV-QSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVR---- 72 (259)
T ss_pred CcccccccceEEEEEEec-cCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEec----
Confidence 368999999999766543 33 457888765332 114667899999999999999999998654
Q ss_pred cCCceEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC-------CEEE
Q psy8260 140 ADFKNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-------ELKI 209 (427)
Q Consensus 140 ~~~~~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~-------~~kl 209 (427)
...+++++++ +++|.+++... .+++..+..++.|++.||+|||++||+||||||+|||++.++ .+||
T Consensus 73 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 73 ---DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred ---CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEe
Confidence 2347788877 78999888643 589999999999999999999999999999999999999877 7999
Q ss_pred eeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccc
Q psy8260 210 LDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 289 (427)
Q Consensus 210 ~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt 289 (427)
+|||+++.... ..... ++
T Consensus 150 ~Dfg~a~~~~~-~~~~~-------------------------------------------------------------~~ 167 (259)
T cd05037 150 SDPGIPITVLS-REERV-------------------------------------------------------------ER 167 (259)
T ss_pred CCCCccccccc-ccccc-------------------------------------------------------------cC
Confidence 99999875322 11112 23
Q ss_pred ccccchHHhhhc--cCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHH
Q psy8260 290 RWYRAPEIMLNW--MHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLS 366 (427)
Q Consensus 290 ~~Y~APEvl~~~--~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~ 366 (427)
..|+|||++.+. .+..++|+||+|++++.+.+ +..++...........+ ...... ......++.+||.
T Consensus 168 ~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~li~ 238 (259)
T cd05037 168 IPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY-QDQHRL--------PMPDCAELANLIN 238 (259)
T ss_pred CCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHH-hcCCCC--------CCCCchHHHHHHH
Confidence 345555555443 35566799999999877643 23333222111111111 111100 0112368899999
Q ss_pred HhcCCCCCCCCCHHHHhc
Q psy8260 367 LMLELDSEKRITAEQALA 384 (427)
Q Consensus 367 ~mL~~dP~~R~ta~e~L~ 384 (427)
+||..||.+|||+.|+++
T Consensus 239 ~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 239 QCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHhccChhhCCCHHHHHH
Confidence 999999999999999985
No 374
>KOG0695|consensus
Probab=100.00 E-value=6.8e-34 Score=262.04 Aligned_cols=266 Identities=19% Similarity=0.299 Sum_probs=194.6
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhc-CCCCCceeeeeeeecCc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKH-MNHENVIGLLDVFHSNT 137 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~ 137 (427)
.+...+|++..+||+|++..|+. +...+|.+.+|+|++++.-.+ .+...=...|-.+..+ -+||.+|.|+.+|+++.
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~-~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes 324 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLL-VRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES 324 (593)
T ss_pred ccccccceeeeeecCcchhhhhh-eehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc
Confidence 45567899999999999999985 445678999999998765322 2222223344444444 38999999998887653
Q ss_pred cccCCceEEEEeccC-CCCHHH-HHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNN-ILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~-~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
.+++|.||. ||+|-- ..+..++++++++.+...|+.||.|||++|||.||||.+|+|+|..|.+||.|+|++
T Consensus 325 ------rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmc 398 (593)
T KOG0695|consen 325 ------RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMC 398 (593)
T ss_pred ------eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchh
Confidence 345555554 788754 445578999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+..-... ....++||||.|.||
T Consensus 399 ke~l~~g----------------------------------------------------------d~tstfcgtpnyiap 420 (593)
T KOG0695|consen 399 KEGLGPG----------------------------------------------------------DTTSTFCGTPNYIAP 420 (593)
T ss_pred hcCCCCC----------------------------------------------------------cccccccCCCcccch
Confidence 6321100 123467899999999
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCCCCHHHH--h-hcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFM--A-KISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
|++++..|...+|||+||+++++|-.+..||. . .+.......|+........ -.+.+..|-.|-..|+..|.+|
T Consensus 421 eilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq---iriprslsvkas~vlkgflnkd 497 (593)
T KOG0695|consen 421 EILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ---IRIPRSLSVKASHVLKGFLNKD 497 (593)
T ss_pred hhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc---ccccceeehhhHHHHHHhhcCC
Confidence 99999999999999999999877744444442 2 1122223333322111100 1234567888999999999999
Q ss_pred CCCCC------CHHHHhcCCCCCCCCC
Q psy8260 373 SEKRI------TAEQALAHPYLSQYSD 393 (427)
Q Consensus 373 P~~R~------ta~e~L~Hp~f~~~~~ 393 (427)
|+.|+ ...++..||||+....
T Consensus 498 p~erlgc~~~~g~~dik~h~ffr~idw 524 (593)
T KOG0695|consen 498 PKERLGCRPQTGFSDIKSHAFFRSIDW 524 (593)
T ss_pred cHHhcCCCcccchhhhhcchhhhhCCH
Confidence 99997 4689999999986544
No 375
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=4.1e-32 Score=262.31 Aligned_cols=251 Identities=20% Similarity=0.240 Sum_probs=179.8
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCc----EEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGV----KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~----~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
...|+..+.||.|+||.||.+.. ..+|. .||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIW-VPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEE-ecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC--
Confidence 45677888999999999997543 33443 57999876432 233344577999999999999999999987542
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
..+++++++ +++|.+++... .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 82 -----~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~ 156 (303)
T cd05110 82 -----TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 156 (303)
T ss_pred -----CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccc
Confidence 234566655 68898887643 5889999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 216 RPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 216 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
+......... ...+..++..|+||
T Consensus 157 ~~~~~~~~~~--------------------------------------------------------~~~~~~~~~~y~~P 180 (303)
T cd05110 157 RLLEGDEKEY--------------------------------------------------------NADGGKMPIKWMAL 180 (303)
T ss_pred ccccCccccc--------------------------------------------------------ccCCCccccccCCH
Confidence 7532211000 00112345678888
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|++.+..+..++|+||+|++++.+.+ +..++... ................ .....+.++.++|.+|+..||+
T Consensus 181 E~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~c~~~~p~ 253 (303)
T cd05110 181 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-PTREIPDLLEKGERLP------QPPICTIDVYMVMVKCWMIDAD 253 (303)
T ss_pred HHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHCCCCCC------CCCCCCHHHHHHHHHHcCCChh
Confidence 88877777778899999998877532 22333211 1112222222211111 1123567899999999999999
Q ss_pred CCCCHHHHhcC
Q psy8260 375 KRITAEQALAH 385 (427)
Q Consensus 375 ~R~ta~e~L~H 385 (427)
+|||++++++.
T Consensus 254 ~Rp~~~~l~~~ 264 (303)
T cd05110 254 SRPKFKELAAE 264 (303)
T ss_pred hCcCHHHHHHH
Confidence 99999998775
No 376
>KOG1026|consensus
Probab=100.00 E-value=4.9e-33 Score=284.58 Aligned_cols=254 Identities=23% Similarity=0.342 Sum_probs=191.4
Q ss_pred ccccCcceeeccccCcccccEEEEeEEeC----cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALDS----VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFH 134 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~ 134 (427)
.++.+..+.+.+.||+|.||.||.+.... ...+.||||.++.. .+....++|.||+++|..++|||||+|+++..
T Consensus 481 ~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 481 LEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred eEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 46778888899999999999999876532 34467999998754 44556778999999999999999999999975
Q ss_pred cCccccCCceEEEEeccC-CCCHHHHHhh-----------CC----CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCC
Q psy8260 135 SNTCLADFKNVYMVTHLM-GADLNNILRT-----------QK----LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSN 198 (427)
Q Consensus 135 ~~~~~~~~~~~~lv~e~~-g~~L~~~l~~-----------~~----l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~N 198 (427)
.+ +.+||++||+ .|||.++|+. .. ++..+...++.||+.||.||-++.+|||||..+|
T Consensus 560 ~~------~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRN 633 (774)
T KOG1026|consen 560 EG------DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRN 633 (774)
T ss_pred cC------CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhh
Confidence 43 5689999998 6999999863 12 7788899999999999999999999999999999
Q ss_pred eEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCC
Q psy8260 199 IAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARP 278 (427)
Q Consensus 199 ILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~ 278 (427)
+||+++..|||+||||+|...+.. +|+. .+
T Consensus 634 CLVge~l~VKIsDfGLsRdiYssD-------YYk~------------~~------------------------------- 663 (774)
T KOG1026|consen 634 CLVGENLVVKISDFGLSRDIYSSD-------YYKV------------RG------------------------------- 663 (774)
T ss_pred ceeccceEEEecccccchhhhhhh-------hhcc------------cC-------------------------------
Confidence 999999999999999998543321 1110 00
Q ss_pred CccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHh-CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCC
Q psy8260 279 TENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGA 357 (427)
Q Consensus 279 ~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (427)
...--+.||+||-|+...+..++|+||.|+++.+. -.+.-|+. ....+..-.+++.-..+ +..+.-
T Consensus 664 ------~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~-glSn~EVIe~i~~g~lL------~~Pe~C 730 (774)
T KOG1026|consen 664 ------NTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY-GLSNQEVIECIRAGQLL------SCPENC 730 (774)
T ss_pred ------CceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc-ccchHHHHHHHHcCCcc------cCCCCC
Confidence 00113568888888888899999999999988444 22322222 22223333333221111 122445
Q ss_pred ChhHHHHHHHhcCCCCCCCCCHHHH
Q psy8260 358 NPQAIDLLSLMLELDSEKRITAEQA 382 (427)
Q Consensus 358 s~~~~dLi~~mL~~dP~~R~ta~e~ 382 (427)
.++..+|+..|-+.+|++|||..|+
T Consensus 731 P~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 731 PTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred CHHHHHHHHHHhhcCcccCCCHHHH
Confidence 6788999999999999999999986
No 377
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.4e-32 Score=258.67 Aligned_cols=245 Identities=23% Similarity=0.299 Sum_probs=174.7
Q ss_pred cccCcccccEEEEeEEeC-----cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 70 PTLSKESFDLIFSSALDS-----VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~-----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
+.+|+|+||.||.+.... ..++.||||.+.... .......+.+|+++++.++||||+++++++... ..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~ 73 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN------EP 73 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC------CC
Confidence 368999999999765421 233689999875432 223445678999999999999999999987543 34
Q ss_pred EEEEeccC-CCCHHHHHhh--------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC-----CEEEe
Q psy8260 145 VYMVTHLM-GADLNNILRT--------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-----ELKIL 210 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~--------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~-----~~kl~ 210 (427)
.+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+++++|+||||+||+++.++ .+||+
T Consensus 74 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~ 153 (269)
T cd05044 74 QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIG 153 (269)
T ss_pred eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEEC
Confidence 68888876 7899988753 2377888999999999999999999999999999999999877 89999
Q ss_pred eCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccc
Q psy8260 211 DFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR 290 (427)
Q Consensus 211 DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~ 290 (427)
|||+++........ . ......++.
T Consensus 154 dfg~~~~~~~~~~~--------~------------------------------------------------~~~~~~~~~ 177 (269)
T cd05044 154 DFGLARDIYKSDYY--------R------------------------------------------------KEGEGLLPV 177 (269)
T ss_pred Cccccccccccccc--------c------------------------------------------------cCcccCCCc
Confidence 99998643211000 0 000112456
Q ss_pred cccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 291 WYRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 291 ~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
.|+|||++.+..+..++|+||+|++++.+.+ +..+|.... .............. ......++++.+||.+||
T Consensus 178 ~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l 250 (269)
T cd05044 178 RWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN-NQEVLQHVTAGGRL------QKPENCPDKIYQLMTNCW 250 (269)
T ss_pred cccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC-HHHHHHHHhcCCcc------CCcccchHHHHHHHHHHc
Confidence 7888888877777778899999999987533 322332211 11111111111111 112345788999999999
Q ss_pred CCCCCCCCCHHHHhc
Q psy8260 370 ELDSEKRITAEQALA 384 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~ 384 (427)
+.||.+|||++++++
T Consensus 251 ~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 251 AQDPSERPTFDRIQE 265 (269)
T ss_pred CCCcccCCCHHHHHH
Confidence 999999999999875
No 378
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.7e-32 Score=256.52 Aligned_cols=249 Identities=17% Similarity=0.201 Sum_probs=167.6
Q ss_pred ccCcccccEEEEeEEeC-cCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEe
Q psy8260 71 TLSKESFDLIFSSALDS-VSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVT 149 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~-~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~ 149 (427)
.||+|+||.||++.... .....+++|.+... ........+.+|+.+++.++||||+++++.+... ...|+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~------~~~~lv~ 74 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN-ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA------IPYLLVF 74 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC-CChHHHHHHHHHHHHHhccCCcchhheEEEecCC------CccEEEE
Confidence 58999999999875432 23445677776543 2233456788999999999999999999987643 3578899
Q ss_pred ccC-CCCHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC---
Q psy8260 150 HLM-GADLNNILRTQ-----KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN--- 220 (427)
Q Consensus 150 e~~-g~~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~--- 220 (427)
|++ +++|.+++... .+++..+..++.||+.||+|||+++++||||||+|||++.++.+||+|||++.....
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh
Confidence 888 67999888642 356677888999999999999999999999999999999999999999999764221
Q ss_pred --CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 221 --EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 221 --~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
......++..|+|||++.+... +.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~------------------------------------------~~------------ 180 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHG------------------------------------------GL------------ 180 (268)
T ss_pred hhcccCCcCcccccCchhcccccC------------------------------------------cc------------
Confidence 1122345555666665431000 00
Q ss_pred hhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcC-CCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSL-PLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
....+..++|+||+|++++.|-+ +..++..........+..... ..... .......++...++|..|+ .||.+|
T Consensus 181 ~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~c~-~~P~~R 256 (268)
T cd05086 181 ITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFK---PQLELPYSERWYEVLQFCW-LSPEKR 256 (268)
T ss_pred ccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCC---CccCCCCcHHHHHHHHHHh-hCcccC
Confidence 00113456799999999877632 222332111111122221111 11111 1112346788899999998 689999
Q ss_pred CCHHHHhc
Q psy8260 377 ITAEQALA 384 (427)
Q Consensus 377 ~ta~e~L~ 384 (427)
||++|+++
T Consensus 257 p~~~~i~~ 264 (268)
T cd05086 257 ATAEEVHR 264 (268)
T ss_pred CCHHHHHH
Confidence 99999874
No 379
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.8e-32 Score=261.28 Aligned_cols=255 Identities=20% Similarity=0.269 Sum_probs=183.5
Q ss_pred cceeeccccCcccccEEEEeEEe---CcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALD---SVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~---~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
..+.+.+.||+|+||.||.+..+ ..++..||||.+...... .....+.+|+++++.++||||+++++++...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---- 78 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKP---- 78 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecC----
Confidence 34667789999999999987754 346889999998754332 3456688999999999999999999887542
Q ss_pred CCceEEEEeccC-CCCHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~~~--l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.....+++++++ +++|.+++.... +++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++..
T Consensus 79 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 79 GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 124578888887 789999887644 89999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
.......+.. .....++..|+|||.
T Consensus 159 ~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~Pe~ 183 (284)
T cd05038 159 LPEDKDYYYV-------------------------------------------------------KEPGESPIFWYAPEC 183 (284)
T ss_pred cccCCcceec-------------------------------------------------------cCCCCCcccccCcHH
Confidence 4322110000 001123345777777
Q ss_pred hhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcH--------------HHHHHHhcCCCCCcccHHhhcCCCChhHHH
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSD--------------SARKYINSLPLLTKKDFRQVFKGANPQAID 363 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d 363 (427)
+.+..+...+|+||+|++++.+-++..++....... ............. .....+.++.+
T Consensus 184 ~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 257 (284)
T cd05038 184 LRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP------RPPSCPDEVYD 257 (284)
T ss_pred HccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCC------CCccCCHHHHH
Confidence 766666667899999999988865443332111000 0000111100000 01234568899
Q ss_pred HHHHhcCCCCCCCCCHHHHhc
Q psy8260 364 LLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 364 Li~~mL~~dP~~R~ta~e~L~ 384 (427)
|+.+||+.||.+|||+.|+++
T Consensus 258 li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 258 LMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHHhccChhhCCCHHHHHH
Confidence 999999999999999999975
No 380
>KOG1027|consensus
Probab=100.00 E-value=1.3e-33 Score=286.53 Aligned_cols=246 Identities=25% Similarity=0.337 Sum_probs=174.0
Q ss_pred ccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccCCceEEE
Q psy8260 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 69 ~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
.+.+|.|+-|+|++... -.|+.||||++... ......|||..|+.- +|||||++++.-. +....||
T Consensus 514 ~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~------d~qF~YI 580 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGV--YEGREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQ------DRQFLYI 580 (903)
T ss_pred HHHcccCCCCcEEEEEe--eCCceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeecc------CCceEEE
Confidence 45788998877664332 35789999988542 234567999999887 7999999987633 3367899
Q ss_pred EeccCCCCHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC---C--CCEEEeeCCCCCC
Q psy8260 148 VTHLMGADLNNILRTQK-----LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE---D--CELKILDFGLARP 217 (427)
Q Consensus 148 v~e~~g~~L~~~l~~~~-----l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~---~--~~~kl~DFGla~~ 217 (427)
..|+|..+|.++++... ........++.|++.||++||+.+||||||||.||||+. + ..++|+|||+++.
T Consensus 581 alELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 581 ALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred EehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 99999999999997631 111334677889999999999999999999999999975 2 4789999999986
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
.....+.+ ....+..||-+|+|||+
T Consensus 661 l~~~~sS~-------------------------------------------------------~r~s~~sGt~GW~APE~ 685 (903)
T KOG1027|consen 661 LAGGKSSF-------------------------------------------------------SRLSGGSGTSGWQAPEQ 685 (903)
T ss_pred cCCCcchh-------------------------------------------------------hcccCCCCcccccCHHH
Confidence 54322110 01334567888888888
Q ss_pred hhhccCCCCCCHHHHHHHHHHh-CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC
Q psy8260 298 MLNWMHYNQTDIHQLNLIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 298 l~~~~~~~~~d~~slg~i~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R 376 (427)
++...-...+|++++||+++.. -.+.-||-+....+ -+++..... +...-...+.+|.|||.+||.+||.+|
T Consensus 686 L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~~-----L~~L~~~~d~eA~dLI~~ml~~dP~~R 758 (903)
T KOG1027|consen 686 LREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNYT-----LVHLEPLPDCEAKDLISRMLNPDPQLR 758 (903)
T ss_pred HhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCccc-----eeeeccCchHHHHHHHHHhcCCCcccC
Confidence 8776666678999999998544 33344553322111 111111111 111111112289999999999999999
Q ss_pred CCHHHHhcCCCCC
Q psy8260 377 ITAEQALAHPYLS 389 (427)
Q Consensus 377 ~ta~e~L~Hp~f~ 389 (427)
|||.++|+||+|=
T Consensus 759 Psa~~VL~HPlFW 771 (903)
T KOG1027|consen 759 PSATDVLNHPLFW 771 (903)
T ss_pred CCHHHHhCCCccC
Confidence 9999999999993
No 381
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.1e-32 Score=254.78 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=182.2
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC--------CCHHHHHHHHHHHHHHhc-CCCCCceeeeeeeecC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF--------QSAVHAKRTYRELRMLKH-MNHENVIGLLDVFHSN 136 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~--------~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~ 136 (427)
|.+.+.||+|+||.||.+.....+++.+|+|.+.... .......++.+|+.++.+ ++||||+++++++...
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 5677899999999999877655578899999875321 122334556789988865 7999999999987643
Q ss_pred ccccCCceEEEEeccC-CCCHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEE
Q psy8260 137 TCLADFKNVYMVTHLM-GADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKI 209 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~-g~~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl 209 (427)
...++++|++ +++|.+++. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||
T Consensus 82 ------~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l 155 (269)
T cd08528 82 ------DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTI 155 (269)
T ss_pred ------CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEE
Confidence 4578888887 678887763 2458999999999999999999996 78999999999999999999999
Q ss_pred eeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccc
Q psy8260 210 LDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 289 (427)
Q Consensus 210 ~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt 289 (427)
+|||++....... ......|+
T Consensus 156 ~dfg~~~~~~~~~-----------------------------------------------------------~~~~~~~~ 176 (269)
T cd08528 156 TDFGLAKQKQPES-----------------------------------------------------------KLTSVVGT 176 (269)
T ss_pred ecccceeeccccc-----------------------------------------------------------ccccccCc
Confidence 9999986432210 00122356
Q ss_pred ccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 290 RWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 290 ~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
..|+|||++.+..+..++|+||+|++++.+.++..+|.............. ..... ......++++.+||.+||
T Consensus 177 ~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~l~~li~~cl 250 (269)
T cd08528 177 ILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE--AVYEP----LPEGMYSEDVTDVITSCL 250 (269)
T ss_pred ccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh--ccCCc----CCcccCCHHHHHHHHHHC
Confidence 678888877766666778999999999888666555533211111111111 11100 011245789999999999
Q ss_pred CCCCCCCCCHHHHhcC
Q psy8260 370 ELDSEKRITAEQALAH 385 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~H 385 (427)
+.||.+|||+.|+..+
T Consensus 251 ~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 251 TPDAEARPDIIQVSAM 266 (269)
T ss_pred CCCCccCCCHHHHHHH
Confidence 9999999999998764
No 382
>KOG1151|consensus
Probab=100.00 E-value=1.6e-33 Score=267.71 Aligned_cols=267 Identities=25% Similarity=0.340 Sum_probs=191.9
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH-----HHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV-----HAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~-----~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
..+|-+...||+|+|+.|| .++|....+.||||+-........ -.+-..||.+|.+.|+||.||++|++|.-+.
T Consensus 462 n~RYLlLhLLGrGGFSEVy-KAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVY-KAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred HHHHHHHHHhccccHHHHH-HhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3556677899999999999 578888889999997644332221 1234568999999999999999999996432
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhc--CceeccCCCCCeEEcC---CCCEEEe
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSA--GIIHRDLKPSNIAVNE---DCELKIL 210 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~--~iiHrDLKp~NILl~~---~~~~kl~ 210 (427)
..++-|.||| |.+|.-+++.. -+++.+++.|+-||+.||.||... .|||-||||.|||+.. .|.+||.
T Consensus 541 -----dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 541 -----DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred -----ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEee
Confidence 4577888888 77898888754 589999999999999999999866 5999999999999853 4789999
Q ss_pred eCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccc
Q psy8260 211 DFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATR 290 (427)
Q Consensus 211 DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~ 290 (427)
||||++.+..+....+ .| .....-..||.
T Consensus 616 DFGLSKIMdddSy~~v----------------------------------------------dG-----meLTSQgAGTY 644 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSV----------------------------------------------DG-----MELTSQGAGTY 644 (775)
T ss_pred ecchhhhccCCccCcc----------------------------------------------cc-----eeeecccCcee
Confidence 9999997755321100 00 00112234555
Q ss_pred cccchHHhh-hc---cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCC--CCcccHHhhcCCCChhHHHH
Q psy8260 291 WYRAPEIML-NW---MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPL--LTKKDFRQVFKGANPQAIDL 364 (427)
Q Consensus 291 ~Y~APEvl~-~~---~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~dL 364 (427)
||+.||++. +. ....++|+||+|+|+|-+..+..||-...... +++..+.. .....|.. -+.++++|++|
T Consensus 645 WYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ---dILqeNTIlkAtEVqFP~-KPvVsseAkaF 720 (775)
T KOG1151|consen 645 WYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ---DILQENTILKATEVQFPP-KPVVSSEAKAF 720 (775)
T ss_pred eecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH---HHHhhhchhcceeccCCC-CCccCHHHHHH
Confidence 555555432 11 23457799999999998877777774332222 22221111 11111111 13579999999
Q ss_pred HHHhcCCCCCCCCCHHHHhcCCCCCC
Q psy8260 365 LSLMLELDSEKRITAEQALAHPYLSQ 390 (427)
Q Consensus 365 i~~mL~~dP~~R~ta~e~L~Hp~f~~ 390 (427)
|++||.+--..|+.+.|+-.||||..
T Consensus 721 IRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 721 IRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred HHHHHHhhhhhhhhHHHHccCccccc
Confidence 99999999999999999999999975
No 383
>KOG1095|consensus
Probab=99.98 E-value=1.3e-31 Score=283.29 Aligned_cols=252 Identities=21% Similarity=0.338 Sum_probs=188.8
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCc----EEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeec
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGV----KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~----~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 135 (427)
++....+++.+.||+|+||.||.+.+....|. .||||.+.+. .+......+++|..+|++++|||||+++++.-.
T Consensus 688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 45677889999999999999999988766664 5999998764 456667789999999999999999999998533
Q ss_pred CccccCCceEEEEeccC-CCCHHHHHhhC--------CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCC
Q psy8260 136 NTCLADFKNVYMVTHLM-GADLNNILRTQ--------KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE 206 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~-g~~L~~~l~~~--------~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~ 206 (427)
....+|++||| ||||..++++. .++..+...++.||++|++||+++++|||||..+|+||+....
T Consensus 767 ------~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~ 840 (1025)
T KOG1095|consen 767 ------SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRV 840 (1025)
T ss_pred ------CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCc
Confidence 23456777776 89999999764 4888999999999999999999999999999999999999999
Q ss_pred EEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccc
Q psy8260 207 LKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 286 (427)
Q Consensus 207 ~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~ 286 (427)
|||+|||+||...... .|... +.
T Consensus 841 VKIaDFGlArDiy~~~-------------------yyr~~--------------------------------------~~ 863 (1025)
T KOG1095|consen 841 VKIADFGLARDIYDKD-------------------YYRKH--------------------------------------GE 863 (1025)
T ss_pred EEEcccchhHhhhhch-------------------heecc--------------------------------------Cc
Confidence 9999999998432211 01100 00
Q ss_pred -cccccccchHHhhhccCCCCCCHHHHHHHHHHh---CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHH
Q psy8260 287 -VATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML---GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAI 362 (427)
Q Consensus 287 -~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 362 (427)
.--.-|||||.+....+..++|+||+|+++.++ |..|.+-.. ..+....+...- .+.. .........
T Consensus 864 a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~--n~~v~~~~~~gg-RL~~------P~~CP~~ly 934 (1025)
T KOG1095|consen 864 AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS--NFEVLLDVLEGG-RLDP------PSYCPEKLY 934 (1025)
T ss_pred cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc--hHHHHHHHHhCC-ccCC------CCCCChHHH
Confidence 011357888888877788899999999987544 555543221 111111122211 1111 112334567
Q ss_pred HHHHHhcCCCCCCCCCHHHHhc
Q psy8260 363 DLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 363 dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
+++.+|.+-||++||+...+++
T Consensus 935 ~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 935 QLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHHccCChhhCccHHHHHh
Confidence 9999999999999999999886
No 384
>KOG1167|consensus
Probab=99.97 E-value=2.7e-32 Score=259.11 Aligned_cols=300 Identities=25% Similarity=0.336 Sum_probs=192.7
Q ss_pred cceeeccccCcccccEEEEeEEeCc--CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCcccc
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSV--SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~--~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~ 140 (427)
..|.+.+.+|.|.|++||.+..-.. .++.||+|.+.... +..+..+|+++|..+ .+.||+++.+++..+
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn---- 107 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCFRNN---- 107 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhhccC----
Confidence 4577889999999999996543322 67889999986532 235578999999988 689999999888654
Q ss_pred CCceEEEEeccCC-CCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-CCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLMG-ADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~g-~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-~~~~kl~DFGla~~~ 218 (427)
+.+.+++++.+ ....+++. .++...++.+++.++.||.++|.+|||||||||+|+|.+. .+.-.|+|||+|...
T Consensus 108 --d~v~ivlp~~~H~~f~~l~~--~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 108 --DQVAIVLPYFEHDRFRDLYR--SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred --CeeEEEecccCccCHHHHHh--cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence 46788888885 46667665 4678889999999999999999999999999999999984 578899999999732
Q ss_pred CCCcccccccccccchhhhh-cccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 219 ENEMTGYVATRWYRAPEIML-NWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
..... .-.+..|+.|-.-. ....+....+.. .-.+.|... +. ......+...+.||++|+||||
T Consensus 184 d~~~~-~~~s~~~~~~~~~~~~g~~~~~~~~~~---~~~p~g~~~---------~~--~~~r~~~~anrAGT~GfRaPEv 248 (418)
T KOG1167|consen 184 DGYQQ-TEHSRSYSGRHATPAMGKDVHCQSVAT---ASKPAGYYR---------RC--NDGRPSERANRAGTPGFRAPEV 248 (418)
T ss_pred Hhhhh-hhhhhhhhcccCCccccCccccccccc---ccCCCCcee---------cc--CCCccceecccCCCCCCCchHH
Confidence 11100 00111222220000 000000000000 000111110 00 1122345667899999999999
Q ss_pred hhhccCCC-CCCHHHHHHHHHHhCCCCHHHHhhcC-------------cHHHHHHHhcCCC---CC--------------
Q psy8260 298 MLNWMHYN-QTDIHQLNLIMEMLGTPPAEFMAKIS-------------SDSARKYINSLPL---LT-------------- 346 (427)
Q Consensus 298 l~~~~~~~-~~d~~slg~i~~~lg~~~~~~~~~~~-------------~~~~~~~~~~~~~---~~-------------- 346 (427)
+.+.+... ..|+||.|+|+..+.+...||..... ....++....... +.
T Consensus 249 L~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f 328 (418)
T KOG1167|consen 249 LFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNF 328 (418)
T ss_pred HhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhch
Confidence 98766544 55999999998666555555532211 1111111000000 00
Q ss_pred -----------cc--cHHhhc-CCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q psy8260 347 -----------KK--DFRQVF-KGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQ 390 (427)
Q Consensus 347 -----------~~--~~~~~~-~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~ 390 (427)
.. .....+ ...+..+.||+.+||+.||.+|+||+++|+||||..
T Consensus 329 ~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 329 ETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred hccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 00 000011 123458899999999999999999999999999984
No 385
>KOG1006|consensus
Probab=99.97 E-value=8.4e-33 Score=247.90 Aligned_cols=258 Identities=19% Similarity=0.287 Sum_probs=183.4
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhc-CCCCCceeeeeeeecCccccCCce
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKH-MNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
..-...||.|.||+|.+ -.++.+|+..|||+|.... .....++++.|....++ -+.||||++|+....+ ..
T Consensus 66 Lqdlg~iG~G~fG~V~K-M~hk~sg~~mAVKrIr~~n-~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E------Gd 137 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNK-MLHKPSGKLMAVKRIRSNN-IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE------GD 137 (361)
T ss_pred HHHHHHhcCCcchhhhh-hhcCccCcEEEEEEeeecc-chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC------Cc
Confidence 33345799999999995 5678899999999997543 34556778888876554 4789999999874332 23
Q ss_pred EEEEeccCCCCHHHHHh------hCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 145 VYMVTHLMGADLNNILR------TQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 145 ~~lv~e~~g~~L~~~l~------~~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.++.||+|..+|..+.+ ...++|..+-.+....+.||+||.. ..|||||+||+|||++..|.+||||||++..
T Consensus 138 cWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 138 CWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred eeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHh
Confidence 57899999888776543 3569999888888889999999975 5899999999999999999999999999865
Q ss_pred CCCC--cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccch
Q psy8260 218 TENE--MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAP 295 (427)
Q Consensus 218 ~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~AP 295 (427)
..+. .+.-.|-+.|||||-|...
T Consensus 218 Lv~SiAkT~daGCrpYmAPERi~p~------------------------------------------------------- 242 (361)
T KOG1006|consen 218 LVDSIAKTVDAGCRPYMAPERIDPS------------------------------------------------------- 242 (361)
T ss_pred HHHHHHhhhccCCccccChhccCCc-------------------------------------------------------
Confidence 4432 1222344445555544210
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHh--hcCcHHHHHHHhc-CCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 296 EIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMA--KISSDSARKYINS-LPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 296 Evl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
...+.-.+|+||||+.+++..++.+|+.. ....+.. ..... .|.+. +...--..|..+++||.-||.+|
T Consensus 243 ----~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~-~Vv~gdpp~l~---~~~~~~~~s~~~~~fintCl~Kd 314 (361)
T KOG1006|consen 243 ----DKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLC-QVVIGDPPILL---FDKECVHYSFSMVRFINTCLIKD 314 (361)
T ss_pred ----cCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHH-HHHcCCCCeec---CcccccccCHHHHHHHHHHhhcc
Confidence 11245567999999999888777766532 2111111 11111 11111 11111236889999999999999
Q ss_pred CCCCCCHHHHhcCCCCCCCCCC
Q psy8260 373 SEKRITAEQALAHPYLSQYSDP 394 (427)
Q Consensus 373 P~~R~ta~e~L~Hp~f~~~~~~ 394 (427)
-+.||+-.+++++||++.+...
T Consensus 315 ~~~Rpky~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 315 RSDRPKYDDLKKFPFYRMYAVE 336 (361)
T ss_pred cccCcchhhhhcCchhhhhhhc
Confidence 9999999999999999876543
No 386
>KOG1094|consensus
Probab=99.97 E-value=1.3e-30 Score=255.29 Aligned_cols=262 Identities=21% Similarity=0.292 Sum_probs=186.4
Q ss_pred CccccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeec
Q psy8260 56 QPYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135 (427)
Q Consensus 56 ~~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 135 (427)
.+-.++++....+++.||+|.||.|..+..+. +.+||||.++.. ........+.+||++|.+|+|||||.|++++..
T Consensus 530 ~al~EfPRs~L~~~ekiGeGqFGEVhLCeveg--~lkVAVK~Lr~~-a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~ 606 (807)
T KOG1094|consen 530 PALVEFPRSRLRFKEKIGEGQFGEVHLCEVEG--PLKVAVKILRPD-ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ 606 (807)
T ss_pred cchhhcchhheehhhhhcCcccceeEEEEecC--ceEEEEeecCcc-cchhHHHHHHHHHHHHhccCCCCeeEEEeeeec
Confidence 34457788889999999999999999776543 689999998653 233345778899999999999999999999654
Q ss_pred CccccCCceEEEEeccC-CCCHHHHHhhCCC---CHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEee
Q psy8260 136 NTCLADFKNVYMVTHLM-GADLNNILRTQKL---SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILD 211 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~-g~~L~~~l~~~~l---~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~D 211 (427)
+ +.+++++||+ .|+|.+++..... .......++.||+.||+||.+.++|||||.+.|||++.++++||+|
T Consensus 607 D------ePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiad 680 (807)
T KOG1094|consen 607 D------DPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIAD 680 (807)
T ss_pred C------CchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecC
Confidence 3 4567888888 7999999876532 3344566999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccc
Q psy8260 212 FGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291 (427)
Q Consensus 212 FGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~ 291 (427)
||++|...... .|++ .-..+-.+.
T Consensus 681 fgmsR~lysg~-------yy~v-------------------------------------------------qgr~vlpiR 704 (807)
T KOG1094|consen 681 FGMSRNLYSGD-------YYRV-------------------------------------------------QGRAVLPIR 704 (807)
T ss_pred cccccccccCC-------ceee-------------------------------------------------ecceeeeee
Confidence 99998543211 0100 001123456
Q ss_pred ccchHHhhhccCCCCCCHHHHHHHHHHh----CCCCHH-HHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHH
Q psy8260 292 YRAPEIMLNWMHYNQTDIHQLNLIMEML----GTPPAE-FMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLS 366 (427)
Q Consensus 292 Y~APEvl~~~~~~~~~d~~slg~i~~~l----g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~ 366 (427)
|||||.|....+.+++|+|++|+.++++ -..|.. ..++.--+....+ .+....................|+.
T Consensus 705 wmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~---~~~~~~~~~l~~P~~cp~~lyelml 781 (807)
T KOG1094|consen 705 WMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEF---FRDQGRQVVLSRPPACPQGLYELML 781 (807)
T ss_pred ehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhh---cCCCCcceeccCCCcCcHHHHHHHH
Confidence 8888887777788899999999876544 223321 1111000111111 1111111112222334567789999
Q ss_pred HhcCCCCCCCCCHHHHhcC
Q psy8260 367 LMLELDSEKRITAEQALAH 385 (427)
Q Consensus 367 ~mL~~dP~~R~ta~e~L~H 385 (427)
+|..+|.++|||.+++-.|
T Consensus 782 ~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 782 RCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred HHhchhhhcCCCHHHHHHH
Confidence 9999999999999998543
No 387
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=9.5e-30 Score=235.35 Aligned_cols=242 Identities=37% Similarity=0.530 Sum_probs=177.0
Q ss_pred cccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEeccCCC-
Q psy8260 76 SFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGA- 154 (427)
Q Consensus 76 ~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~g~- 154 (427)
+||.||.+. ...+|+.||+|++........ ...+.+|++.++.++|+||+++++.+... ...++++++.++
T Consensus 1 ~~g~v~~~~-~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~------~~~~l~~e~~~~~ 72 (244)
T smart00220 1 SFGKVYLAR-DKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDE------DKLYLVMEYCDGG 72 (244)
T ss_pred CceEEEEEE-ECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeC------CEEEEEEeCCCCC
Confidence 478888654 455789999999865432221 46678999999999999999999887543 457888888854
Q ss_pred CHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccc
Q psy8260 155 DLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRA 233 (427)
Q Consensus 155 ~L~~~l~~~~-l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~a 233 (427)
+|..++.... +++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 73 ~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----------- 141 (244)
T smart00220 73 DLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----------- 141 (244)
T ss_pred CHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-----------
Confidence 9999886654 8999999999999999999999999999999999999999999999999886433210
Q ss_pred hhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHH
Q psy8260 234 PEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLN 313 (427)
Q Consensus 234 PE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg 313 (427)
......++..|++||.+....+..++|+|++|
T Consensus 142 ------------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG 173 (244)
T smart00220 142 ------------------------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLG 173 (244)
T ss_pred ------------------------------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHH
Confidence 00112355667777776655566678999999
Q ss_pred HHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 314 LIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 314 ~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
++++.+.++..++................... ........+.++.+++.+||..||++|||+.|+++||||
T Consensus 174 ~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 174 VILYELLTGKPPFPGDDQLLELFKKIGKPKPP----FPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC----CccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 99877766554443311112221221111110 001111156789999999999999999999999999997
No 388
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=4.5e-31 Score=286.38 Aligned_cols=221 Identities=16% Similarity=0.198 Sum_probs=161.2
Q ss_pred cCCC-CCceeeeeeeecCcccc-CCceEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q psy8260 120 HMNH-ENVIGLLDVFHSNTCLA-DFKNVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLK 195 (427)
Q Consensus 120 ~l~H-pnIv~l~~~~~~~~~~~-~~~~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLK 195 (427)
.++| +||+.++++|....... ....++.++|+++++|.++++. ..+++.++..+++||+.||+|||++||||||||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 3455 58888888874332111 1235677788889999999964 359999999999999999999999999999999
Q ss_pred CCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCC
Q psy8260 196 PSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGL 275 (427)
Q Consensus 196 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~ 275 (427)
|+||||+..+.+|++|||++..... ..++.+|++|||+
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~------------------------------------------~~~~~~ki~DfG~ 145 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGS------------------------------------------DEDATTKSREIGS 145 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccc------------------------------------------cccCccccccccc
Confidence 9999999999999999998763211 1123567788887
Q ss_pred CCCCcc-------------------ccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHH
Q psy8260 276 ARPTEN-------------------EMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSAR 336 (427)
Q Consensus 276 ~~~~~~-------------------~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~ 336 (427)
++.... .....+||++|||||++.+..+..++|+||+|+++++|.++..++..... ...
T Consensus 146 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~ 223 (793)
T PLN00181 146 SRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMS 223 (793)
T ss_pred ccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHH
Confidence 753211 01124689999999999988888899999999999998766554432110 111
Q ss_pred HHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 337 KYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
..... ..+. ......+++.+++.+||+.||.+|||+.|+|+||||.+.
T Consensus 224 ~~~~~--~~~~-----~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 224 SLRHR--VLPP-----QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred HHHHh--hcCh-----hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 11000 0011 011225677899999999999999999999999999764
No 389
>KOG4257|consensus
Probab=99.97 E-value=2e-30 Score=255.36 Aligned_cols=249 Identities=22% Similarity=0.360 Sum_probs=183.7
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCc-CCc--EEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecC
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSV-SGV--KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSN 136 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~-~g~--~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~ 136 (427)
++.+..+.+++.||.|.||.||.|.+... .|. .||||.-+... .....+.++.|.-+|++++|||||+|++++..
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e- 462 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE- 462 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-
Confidence 56677788889999999999999987543 343 48889776543 34457889999999999999999999999764
Q ss_pred ccccCCceEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCC
Q psy8260 137 TCLADFKNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 213 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFG 213 (427)
..++++||++ -|.|..+++.+ .++......|+.||+.||.|||+.++|||||..+|||+.....|||+|||
T Consensus 463 ------~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFG 536 (974)
T KOG4257|consen 463 ------QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFG 536 (974)
T ss_pred ------cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccc
Confidence 3578999988 58999999754 47888888999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 214 LARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 214 la~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
|+|-.+.+.. |.| + .+ .-.+-||
T Consensus 537 LSR~~ed~~y-------Yka------------S-------------------------------------~~-kLPIKWm 559 (974)
T KOG4257|consen 537 LSRYLEDDAY-------YKA------------S-------------------------------------RG-KLPIKWM 559 (974)
T ss_pred hhhhccccch-------hhc------------c-------------------------------------cc-ccceeec
Confidence 9986554311 110 0 00 0124588
Q ss_pred chHHhhhccCCCCCCHHHHHHHH-HHh--CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcC
Q psy8260 294 APEIMLNWMHYNQTDIHQLNLIM-EML--GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLE 370 (427)
Q Consensus 294 APEvl~~~~~~~~~d~~slg~i~-~~l--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~ 370 (427)
|||-+....+...+|+|.+|+.+ .+| |..|+..... ++-. ..+....-....+...|.+..|.++|-.
T Consensus 560 aPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN--sDVI-------~~iEnGeRlP~P~nCPp~LYslmskcWa 630 (974)
T KOG4257|consen 560 APESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN--SDVI-------GHIENGERLPCPPNCPPALYSLMSKCWA 630 (974)
T ss_pred CccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc--cceE-------EEecCCCCCCCCCCCChHHHHHHHHHhc
Confidence 88888877788889999999655 444 5544322211 1100 0000000001223456778899999999
Q ss_pred CCCCCCCCHHHH
Q psy8260 371 LDSEKRITAEQA 382 (427)
Q Consensus 371 ~dP~~R~ta~e~ 382 (427)
+||.+||+..|+
T Consensus 631 yeP~kRPrftei 642 (974)
T KOG4257|consen 631 YEPSKRPRFTEI 642 (974)
T ss_pred cCcccCCcHHHH
Confidence 999999987654
No 390
>KOG0576|consensus
Probab=99.97 E-value=1.3e-31 Score=265.75 Aligned_cols=259 Identities=22% Similarity=0.342 Sum_probs=189.7
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
+.+|++..++|.|.+|.||+ +.|..++...|||.++...... ..-...|+-+++..+|||||.+++-|-..
T Consensus 14 ~ddyellqrvgsgTygdvyK-aRd~~s~elaavkvVkLep~dd--~~~iqqei~~~~dc~h~nivay~gsylr~------ 84 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYK-ARDKRSGELAAVKVVKLEPGDD--FSGIQQEIGMLRDCRHPNIVAYFGSYLRR------ 84 (829)
T ss_pred ccchhheeeecCCcccchhh-hcccccCchhhheeeeccCCcc--ccccccceeeeecCCCcChHHHHhhhhhh------
Confidence 45688889999999999995 7788999999999997653332 33456799999999999999999876433
Q ss_pred ceEEEEeccC-CCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
..+.+.|||| ||+|+++.. .+.+++.++..+++..+.||+|||++|-+|||||-.|||+++.|.+|++|||.+.....
T Consensus 85 dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 85 DKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred cCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh
Confidence 3578999999 568888765 36799999999999999999999999999999999999999999999999998754321
Q ss_pred CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh--
Q psy8260 221 EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM-- 298 (427)
Q Consensus 221 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl-- 298 (427)
. -.....+.|||+||||||-
T Consensus 165 t----------------------------------------------------------i~KrksfiGtpywmapEvaav 186 (829)
T KOG0576|consen 165 T----------------------------------------------------------IAKRKSFIGTPYWMAPEVAAV 186 (829)
T ss_pred h----------------------------------------------------------hhhhhcccCCccccchhHHHH
Confidence 1 0123445666666666653
Q ss_pred -hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC
Q psy8260 299 -LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI 377 (427)
Q Consensus 299 -~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ 377 (427)
+...|...+|+|++|+..-++|....|..+........-..++.+ .+..+++. ...++.+-+|++.+|..+|+|||
T Consensus 187 erkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~--qpp~lkDk-~kws~~fh~fvK~altknpKkRp 263 (829)
T KOG0576|consen 187 ERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGF--QPPTLKDK-TKWSEFFHNFVKGALTKNPKKRP 263 (829)
T ss_pred HhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCC--CCCcccCC-ccchHHHHHHHHHHhcCCCccCC
Confidence 223466678999999777677654444332211111111111111 11111110 12356778999999999999999
Q ss_pred CHHHHhcCCCCCCC
Q psy8260 378 TAEQALAHPYLSQY 391 (427)
Q Consensus 378 ta~e~L~Hp~f~~~ 391 (427)
|++.+|+|||+++.
T Consensus 264 taeklL~h~fvs~~ 277 (829)
T KOG0576|consen 264 TAEKLLQHPFVSQT 277 (829)
T ss_pred Chhhheeceeeccc
Confidence 99999999999854
No 391
>KOG4278|consensus
Probab=99.97 E-value=4e-30 Score=252.93 Aligned_cols=252 Identities=19% Similarity=0.314 Sum_probs=185.5
Q ss_pred ccccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecC
Q psy8260 57 PYSEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSN 136 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~ 136 (427)
.-||+.+.++.+...||.|+||.||.+.+.+. .--||||.++. +....+.|++|+.+|+.++|||+|+|++++..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKky-slTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeecc-ceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 45788899999999999999999999998764 34689998864 345677899999999999999999999996543
Q ss_pred ccccCCceEEEEeccC-CCCHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeC
Q psy8260 137 TCLADFKNVYMVTHLM-GADLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~-g~~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DF 212 (427)
..+||+.||| .|+|.++|+.. .++.-....++.||..||.||..+++|||||...|+|+.++..|||+||
T Consensus 336 ------pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADF 409 (1157)
T KOG4278|consen 336 ------PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADF 409 (1157)
T ss_pred ------CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeecc
Confidence 4578888877 78999999753 3566666778889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCc-ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccc
Q psy8260 213 GLARPTENEM-TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291 (427)
Q Consensus 213 Gla~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~ 291 (427)
||+|.+..+. +...|..+ .+-
T Consensus 410 GLsRlMtgDTYTAHAGAKF----------------------------------------------------------PIK 431 (1157)
T KOG4278|consen 410 GLSRLMTGDTYTAHAGAKF----------------------------------------------------------PIK 431 (1157)
T ss_pred chhhhhcCCceecccCccC----------------------------------------------------------ccc
Confidence 9999875542 32333221 123
Q ss_pred ccchHHhhhccCCCCCCHHHHHHHHHHhCC-CCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcC
Q psy8260 292 YRAPEIMLNWMHYNQTDIHQLNLIMEMLGT-PPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLE 370 (427)
Q Consensus 292 Y~APEvl~~~~~~~~~d~~slg~i~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~ 370 (427)
|.|||-+-...+.-++|+|++|+++.+..+ +..|+. .+........+..--.. +...+..+....|++.|.+
T Consensus 432 WTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYP-GidlSqVY~LLEkgyRM------~~PeGCPpkVYeLMraCW~ 504 (1157)
T KOG4278|consen 432 WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYGLLEKGYRM------DGPEGCPPKVYELMRACWN 504 (1157)
T ss_pred ccCcccccccccccchhhHHHHHHHHHHHhcCCCCCC-CccHHHHHHHHhccccc------cCCCCCCHHHHHHHHHHhc
Confidence 455555544446667899999988865522 222221 11111122222111111 1124566788999999999
Q ss_pred CCCCCCCCHHHHh
Q psy8260 371 LDSEKRITAEQAL 383 (427)
Q Consensus 371 ~dP~~R~ta~e~L 383 (427)
++|+.||+.+|+-
T Consensus 505 WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 505 WSPSDRPSFAEIH 517 (1157)
T ss_pred CCcccCccHHHHH
Confidence 9999999988763
No 392
>KOG0196|consensus
Probab=99.96 E-value=4e-30 Score=259.11 Aligned_cols=258 Identities=22% Similarity=0.320 Sum_probs=194.7
Q ss_pred ccccCcceeeccccCcccccEEEEeEEeCc--CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecC
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALDSV--SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSN 136 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~--~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~ 136 (427)
.|+.-..+.|.++||.|.||.|+.+.+... ....||||.++.. ..+.+...|+.|+.||-+++||||++|-++....
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks 702 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS 702 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC
Confidence 366677789999999999999999987643 3456999999754 4566778899999999999999999999998643
Q ss_pred ccccCCceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCC
Q psy8260 137 TCLADFKNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 213 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFG 213 (427)
..+.|+.||| +|.|+.+|+. +.|+..++.-+.+.|+.||+||-++|.|||||...|||++.+..+|++|||
T Consensus 703 ------~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFG 776 (996)
T KOG0196|consen 703 ------KPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFG 776 (996)
T ss_pred ------ceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEecccc
Confidence 4678888888 7999999975 468888999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 214 LARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 214 la~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
|+|..+++......| .+ |++ -..|.
T Consensus 777 LSRvledd~~~~ytt-----------------~G-------------------------------------GKI-PiRWT 801 (996)
T KOG0196|consen 777 LSRVLEDDPEAAYTT-----------------LG-------------------------------------GKI-PIRWT 801 (996)
T ss_pred ceeecccCCCccccc-----------------cC-------------------------------------Ccc-ceeec
Confidence 999776543111111 00 111 24577
Q ss_pred chHHhhhccCCCCCCHHHHHHHH-HHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 294 APEIMLNWMHYNQTDIHQLNLIM-EMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 294 APEvl~~~~~~~~~d~~slg~i~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
|||.|....+...+|+||.|+++ ..|-.+..|+|+-...+-.+ -+..--.++. ...-...+..|+..|-++|
T Consensus 802 APEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIk-aIe~gyRLPp------PmDCP~aL~qLMldCWqkd 874 (996)
T KOG0196|consen 802 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK-AIEQGYRLPP------PMDCPAALYQLMLDCWQKD 874 (996)
T ss_pred ChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHH-HHHhccCCCC------CCCCcHHHHHHHHHHHHHH
Confidence 88888777788888999999876 55666666666543222221 1111111111 0112234568899999999
Q ss_pred CCCCCCHHHHhcC
Q psy8260 373 SEKRITAEQALAH 385 (427)
Q Consensus 373 P~~R~ta~e~L~H 385 (427)
-.+||+..|++++
T Consensus 875 R~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 875 RNRRPKFAQIVST 887 (996)
T ss_pred hhcCCCHHHHHHH
Confidence 9999999998875
No 393
>KOG3653|consensus
Probab=99.96 E-value=9.3e-29 Score=237.56 Aligned_cols=252 Identities=23% Similarity=0.365 Sum_probs=172.4
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHh--cCCCCCceeeeeeeecCccccCC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK--HMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~--~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...+...+|+|.||.||++.++ ++.||||++.. .+.+.+..|-+|.+ .++|+||+++++.-.. +..+.
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~---~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr--~t~~~ 280 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD---NRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKR--GTADR 280 (534)
T ss_pred chhhHHHhhcCccceeehhhcc---CceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhcc--CCccc
Confidence 3456688999999999987764 58999998842 33445666655554 5799999999987443 22334
Q ss_pred ceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHh---------cCceeccCCCCCeEEcCCCCEEEeeC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHS---------AGIIHRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~---------~~iiHrDLKp~NILl~~~~~~kl~DF 212 (427)
..+.+|++|. .|+|.++|+...+++....+++..+++||+|||+ ..|+|||||..|||+.+|+.+.|+||
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 5677888876 7999999999999999999999999999999995 35999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
|||........ .....+.+||..|
T Consensus 361 GLAl~~~p~~~--------------------------------------------------------~~d~~~qVGT~RY 384 (534)
T KOG3653|consen 361 GLALRLEPGKP--------------------------------------------------------QGDTHGQVGTRRY 384 (534)
T ss_pred ceeEEecCCCC--------------------------------------------------------Ccchhhhhhhhhh
Confidence 99975432100 0012234555555
Q ss_pred cchHHhhhccCC------CCCCHHHHHHHHHHhCC--------CCH----HHHhhcCc----HHHHHH---HhcCCCCCc
Q psy8260 293 RAPEIMLNWMHY------NQTDIHQLNLIMEMLGT--------PPA----EFMAKISS----DSARKY---INSLPLLTK 347 (427)
Q Consensus 293 ~APEvl~~~~~~------~~~d~~slg~i~~~lg~--------~~~----~~~~~~~~----~~~~~~---~~~~~~~~~ 347 (427)
|||||+.+..-+ ...|++++|+++.++.+ ++. +|-.++.. +..+.. .+..|.++
T Consensus 385 MAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p- 463 (534)
T KOG3653|consen 385 MAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIP- 463 (534)
T ss_pred cCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCCh-
Confidence 555555543332 34599999999876621 111 22222221 111111 11223222
Q ss_pred ccHHhhcCC--CChhHHHHHHHhcCCCCCCCCCHHHH------hcCCC
Q psy8260 348 KDFRQVFKG--ANPQAIDLLSLMLELDSEKRITAEQA------LAHPY 387 (427)
Q Consensus 348 ~~~~~~~~~--~s~~~~dLi~~mL~~dP~~R~ta~e~------L~Hp~ 387 (427)
+.|.. .-..+++.|..|-..||+.|+||.-+ |.|+|
T Consensus 464 ----~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 464 ----DAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred ----hhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 22222 12356799999999999999999654 56766
No 394
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=1.6e-28 Score=272.56 Aligned_cols=240 Identities=19% Similarity=0.269 Sum_probs=169.3
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
+...+.+|+|+||.||++ ....+|+.||||++...... ..+|++++++++|||||++++++... ...
T Consensus 692 ~~~~~~ig~G~~g~Vy~~-~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~------~~~ 758 (968)
T PLN00113 692 LKEENVISRGKKGASYKG-KSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSE------KGA 758 (968)
T ss_pred CCcccEEccCCCeeEEEE-EECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcC------CCC
Confidence 455678999999999975 45568899999988643211 12468899999999999999998654 346
Q ss_pred EEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH---hcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 146 YMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH---~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
|++|||+ +++|.++++ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++..++. ||.+......
T Consensus 759 ~lv~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~ 835 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLR--NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD 835 (968)
T ss_pred EEEEeCCCCCcHHHHHh--cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC
Confidence 8888888 789999986 4889999999999999999999 6799999999999999988888775 5544321100
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
. ...||+.|+|||++.+.
T Consensus 836 -~-------------------------------------------------------------~~~~t~~y~aPE~~~~~ 853 (968)
T PLN00113 836 -T-------------------------------------------------------------KCFISSAYVAPETRETK 853 (968)
T ss_pred -C-------------------------------------------------------------CccccccccCcccccCC
Confidence 0 11356677777777666
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCc-HHHHHHHhc-----------CCCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISS-DSARKYINS-----------LPLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
.+..++|+||+|++++++-++..|+...... .....+... .+..... . ........++.+++.+|+
T Consensus 854 ~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~~Cl 931 (968)
T PLN00113 854 DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD-V-SVNQNEIVEVMNLALHCT 931 (968)
T ss_pred CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC-C-CccHHHHHHHHHHHHhhC
Confidence 6777889999999998886655544221110 111111110 0000000 0 000001135679999999
Q ss_pred CCCCCCCCCHHHHhcC
Q psy8260 370 ELDSEKRITAEQALAH 385 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~H 385 (427)
+.||++|||++|+++.
T Consensus 932 ~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 932 ATDPTARPCANDVLKT 947 (968)
T ss_pred cCCchhCcCHHHHHHH
Confidence 9999999999999876
No 395
>KOG0199|consensus
Probab=99.96 E-value=1.1e-28 Score=245.89 Aligned_cols=259 Identities=21% Similarity=0.213 Sum_probs=193.3
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCc--EEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGV--KVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNT 137 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~--~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 137 (427)
.|..+.+.+.+.||.|.||.|..+.++..+|+ .||||.+....... ....|++|+.+|.+|+|||+++||+++-+
T Consensus 106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-- 182 (1039)
T KOG0199|consen 106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-- 182 (1039)
T ss_pred eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc--
Confidence 35566778889999999999999999887664 58999997654433 56789999999999999999999999764
Q ss_pred cccCCceEEEEeccC-CCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCC
Q psy8260 138 CLADFKNVYMVTHLM-GADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 213 (427)
Q Consensus 138 ~~~~~~~~~lv~e~~-g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFG 213 (427)
..+.||+|++ .|+|.+.|+. ..|.......|+.||+.||.||.++++|||||...|+|+-....|||||||
T Consensus 183 -----qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 183 -----QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred -----chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeeccc
Confidence 3467899988 6888877765 347888899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 214 LARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 214 la~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
|.|.+......|+ |+|- +.--.-|-
T Consensus 258 LmRaLg~ned~Yv-----m~p~--------------------------------------------------rkvPfAWC 282 (1039)
T KOG0199|consen 258 LMRALGENEDMYV-----MAPQ--------------------------------------------------RKVPFAWC 282 (1039)
T ss_pred ceeccCCCCcceE-----ecCC--------------------------------------------------CcCccccc
Confidence 9997665433221 1110 00112367
Q ss_pred chHHhhhccCCCCCCHHHHHHHHHHhC-CCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 294 APEIMLNWMHYNQTDIHQLNLIMEMLG-TPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 294 APEvl~~~~~~~~~d~~slg~i~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
|||.|+...+..++|+|+.|+.+.+|- .+..+|.......... .+.....++ ..+..+.+..+++.+|-..+
T Consensus 283 aPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~-~iD~~erLp------RPk~csedIY~imk~cWah~ 355 (1039)
T KOG0199|consen 283 APESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILK-NIDAGERLP------RPKYCSEDIYQIMKNCWAHN 355 (1039)
T ss_pred CHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHH-hccccccCC------CCCCChHHHHHHHHHhccCC
Confidence 888888888888999999999876654 3444443322222222 111111111 12345677889999999999
Q ss_pred CCCCCCHHHHhcCCCC
Q psy8260 373 SEKRITAEQALAHPYL 388 (427)
Q Consensus 373 P~~R~ta~e~L~Hp~f 388 (427)
|++|+|...+.+.-+.
T Consensus 356 paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 356 PADRPTFSAIREDLVL 371 (1039)
T ss_pred ccccccHHHHHHhHHH
Confidence 9999999887644433
No 396
>KOG0984|consensus
Probab=99.96 E-value=1.1e-28 Score=214.05 Aligned_cols=170 Identities=24% Similarity=0.399 Sum_probs=130.9
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhc-CCCCCceeeeeeeecCcc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKH-MNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~ 138 (427)
++..........||+|++|.|- ...+..+|+..|+|.+.... ..+..++.++|+.+.++ ...|.+|.+|+.+...
T Consensus 42 eV~ad~L~~i~elGrGayG~ve-kmrh~~sg~imAvKri~~tv-n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re-- 117 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVE-KMRHIQSGTIMAVKRIRATV-NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE-- 117 (282)
T ss_pred ccchhhhhhhhhhcCCccchhh-heeeccCCeEEEEeeehhhc-ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc--
Confidence 3444445556789999998765 45567899999999997543 34555677889987655 4789999999875432
Q ss_pred ccCCceEEEEeccCCCCHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCCeEEcCCCCEEEeeC
Q psy8260 139 LADFKNVYMVTHLMGADLNNILR-----TQKLSDDHVQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 139 ~~~~~~~~lv~e~~g~~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~yLH~~-~iiHrDLKp~NILl~~~~~~kl~DF 212 (427)
..+.+.||.+..+|..+.+ ++.++|..+-+++..|+.||.|||++ .|||||+||+||||+.+|.||+|||
T Consensus 118 ----gdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDF 193 (282)
T KOG0984|consen 118 ----GDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDF 193 (282)
T ss_pred ----ccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccc
Confidence 4588999999988887653 35699999999999999999999976 8999999999999999999999999
Q ss_pred CCCCCCCCCc--ccccccccccchhhh
Q psy8260 213 GLARPTENEM--TGYVATRWYRAPEIM 237 (427)
Q Consensus 213 Gla~~~~~~~--~~~~gt~~y~aPE~l 237 (427)
|++....+.. +.-.|-..|||||.+
T Consensus 194 GIsG~L~dSiAkt~daGCkpYmaPEri 220 (282)
T KOG0984|consen 194 GISGYLVDSIAKTMDAGCKPYMAPERI 220 (282)
T ss_pred ccceeehhhhHHHHhcCCCccCChhhc
Confidence 9987554432 112344455555554
No 397
>KOG1152|consensus
Probab=99.96 E-value=9.4e-29 Score=242.02 Aligned_cols=189 Identities=25% Similarity=0.428 Sum_probs=150.7
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH------HHHHHHHHHHHHhcCC---CCCceeeeeeeec
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV------HAKRTYRELRMLKHMN---HENVIGLLDVFHS 135 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~------~~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~ 135 (427)
.|...+.+|.|+||.|..+ .++.....|+||.|.+...-.. ..-..--||+||..++ |+||++++++|+.
T Consensus 562 ~yttlq~lG~GAyGkV~la-i~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLA-IHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred cceeeeeccccccceEEEe-eecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 4777889999999999964 5556688999999876432110 0111335999999997 9999999999976
Q ss_pred CccccCCceEEEEeccCC--CCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeC
Q psy8260 136 NTCLADFKNVYMVTHLMG--ADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~g--~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DF 212 (427)
+ +++|++++..| -||.+++.. ..++|.+++.+++||+.|+++||++||||||||-||+.++.+|-+||+||
T Consensus 641 d------d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 D------DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred C------CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeec
Confidence 4 57899999874 588998875 56999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
|.|.... ++ ....++||..|
T Consensus 715 gsaa~~k--------------------------sg----------------------------------pfd~f~gtv~~ 734 (772)
T KOG1152|consen 715 GSAAYTK--------------------------SG----------------------------------PFDVFVGTVDY 734 (772)
T ss_pred cchhhhc--------------------------CC----------------------------------Ccceeeeeccc
Confidence 9864221 11 23456788888
Q ss_pred cchHHhhhccCCCC-CCHHHHHHHHHHhC
Q psy8260 293 RAPEIMLNWMHYNQ-TDIHQLNLIMEMLG 320 (427)
Q Consensus 293 ~APEvl~~~~~~~~-~d~~slg~i~~~lg 320 (427)
.|||++.+..|-.+ .|||+||+++|..-
T Consensus 735 aapevl~g~~y~gk~qdiwalgillytiv 763 (772)
T KOG1152|consen 735 AAPEVLGGEKYLGKPQDIWALGILLYTIV 763 (772)
T ss_pred cchhhhCCCccCCCcchhhhhhheeeEEE
Confidence 88888887776654 49999999887553
No 398
>KOG0200|consensus
Probab=99.95 E-value=3.8e-27 Score=247.15 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=187.1
Q ss_pred cccccCcceeeccccCcccccEEEEeEEeCcC------CcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeee
Q psy8260 58 YSEICRGVIDIGPTLSKESFDLIFSSALDSVS------GVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLL 130 (427)
Q Consensus 58 ~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~------g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~ 130 (427)
.+++.+....+++.+|.|.||.|+++...... ...||||.++..... .+.+.+..|+++|+.+ .|+||+.++
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 46777777788899999999999988754222 457999988765443 5667788999999998 599999999
Q ss_pred eeeecCccccCCceEEEEeccC-CCCHHHHHhhCC-----------------CCHHHHHHHHHHHHHHHHHHHhcCceec
Q psy8260 131 DVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQK-----------------LSDDHVQFLVYQILRGLKYIHSAGIIHR 192 (427)
Q Consensus 131 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~~-----------------l~~~~~~~~~~qi~~aL~yLH~~~iiHr 192 (427)
++... ...++++.|++ .|+|.++++..+ ++..+...++.||+.|++||++.++|||
T Consensus 369 G~~t~------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHR 442 (609)
T KOG0200|consen 369 GACTQ------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHR 442 (609)
T ss_pred eeecc------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccch
Confidence 98654 24466666666 799999998766 8889999999999999999999999999
Q ss_pred cCCCCCeEEcCCCCEEEeeCCCCCCCCCCcc-cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhh
Q psy8260 193 DLKPSNIAVNEDCELKILDFGLARPTENEMT-GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKIL 271 (427)
Q Consensus 193 DLKp~NILl~~~~~~kl~DFGla~~~~~~~~-~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~ 271 (427)
||..+|||+..+..+||+|||+||....... ...++.
T Consensus 443 DLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~------------------------------------------ 480 (609)
T KOG0200|consen 443 DLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSA------------------------------------------ 480 (609)
T ss_pred hhhhhhEEecCCCEEEEccccceeccCCCCceEecCCC------------------------------------------
Confidence 9999999999999999999999985332210 000000
Q ss_pred ccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHh---CCCCHHHHhhcCcHHHHHHHhcCCCCCcc
Q psy8260 272 DFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML---GTPPAEFMAKISSDSARKYINSLPLLTKK 348 (427)
Q Consensus 272 d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (427)
++ --..|||||.+....+..++|+||.|+.++++ |..|.+-+. .......+++.--..
T Consensus 481 -------------~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~--~~~~l~~~l~~G~r~--- 541 (609)
T KOG0200|consen 481 -------------GT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP--PTEELLEFLKEGNRM--- 541 (609)
T ss_pred -------------Cc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC--cHHHHHHHHhcCCCC---
Confidence 00 01237788877777788889999999987654 544443211 011222222211111
Q ss_pred cHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 349 DFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 349 ~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
......+++..++++.|-..||++||+..|+.+
T Consensus 542 ---~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 542 ---EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred ---CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 011234788999999999999999999988753
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=3e-26 Score=206.46 Aligned_cols=210 Identities=36% Similarity=0.598 Sum_probs=166.8
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEecc
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHL 151 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~ 151 (427)
||.|++|.||++.. ..+|+.+++|+........ ....+.+|++.++.++|++|+++++++... ...++++++
T Consensus 1 l~~g~~~~v~~~~~-~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~------~~~~~~~e~ 72 (215)
T cd00180 1 LGEGGFGTVYLARD-KKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDE------NHLYLVMEY 72 (215)
T ss_pred CCcCCceEEEEEEe-cCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecC------CeEEEEEec
Confidence 68999999997554 4478999999987543221 345678999999999999999999987653 457888888
Q ss_pred CC-CCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-CCCEEEeeCCCCCCCCCCcccccc
Q psy8260 152 MG-ADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDFGLARPTENEMTGYVA 227 (427)
Q Consensus 152 ~g-~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~g 227 (427)
++ ++|.+++... .++...+..++.+++.+|.|||++|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 73 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---- 148 (215)
T cd00180 73 CEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---- 148 (215)
T ss_pred CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----
Confidence 85 8999998765 6899999999999999999999999999999999999998 89999999998864432210
Q ss_pred cccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-cCCCC
Q psy8260 228 TRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-MHYNQ 306 (427)
Q Consensus 228 t~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-~~~~~ 306 (427)
......++..|++||++... .....
T Consensus 149 ------------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~ 174 (215)
T cd00180 149 ------------------------------------------------------LLKTIVGTPAYMAPEVLLGKGYYSEK 174 (215)
T ss_pred ------------------------------------------------------hhhcccCCCCccChhHhcccCCCCch
Confidence 00011234456666665544 45566
Q ss_pred CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCC
Q psy8260 307 TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHP 386 (427)
Q Consensus 307 ~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp 386 (427)
.|+|++|++++.+ ....++|.+||+.||++|+|++++++|+
T Consensus 175 ~D~~~lg~~~~~l---------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 175 SDIWSLGVILYEL---------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred hhhHHHHHHHHHH---------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 7999999998776 3457999999999999999999999986
No 400
>KOG2052|consensus
Probab=99.95 E-value=1.4e-27 Score=227.91 Aligned_cols=166 Identities=25% Similarity=0.430 Sum_probs=131.4
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHh--cCCCCCceeeeeeeecCccccC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLK--HMNHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~--~l~HpnIv~l~~~~~~~~~~~~ 141 (427)
..+.+.+.+|+|.||.|+.|.+ .|..||||++.. .+....+||.+|.+ .|+|+||+.+++.-..+. ..
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w---rGe~VAVKiF~s-----rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~--gs 280 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW---RGEDVAVKIFSS-----RDERSWFRETEIYQTVMLRHENILGFIAADNKDN--GS 280 (513)
T ss_pred heeEEEEEecCccccceeeccc---cCCceEEEEecc-----cchhhhhhHHHHHHHHHhccchhhhhhhccccCC--Cc
Confidence 4567889999999999998877 478999998853 22345777777765 469999999987633221 11
Q ss_pred CceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhc--------CceeccCCCCCeEEcCCCCEEEeeC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSA--------GIIHRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~--------~iiHrDLKp~NILl~~~~~~kl~DF 212 (427)
-..++++.+|. .|+|+++|....++...+.+++..+++||++||-. .|.|||||..|||+..++.+.|+|+
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 24588999887 79999999999999999999999999999999942 4999999999999999999999999
Q ss_pred CCCCCCCCC-------cccccccccccchhhhhc
Q psy8260 213 GLARPTENE-------MTGYVATRWYRAPEIMLN 239 (427)
Q Consensus 213 Gla~~~~~~-------~~~~~gt~~y~aPE~l~~ 239 (427)
|||....+. .+..+||..|||||+|.+
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLde 394 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDE 394 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhh
Confidence 999654322 234567777777777654
No 401
>KOG1345|consensus
Probab=99.94 E-value=1.2e-27 Score=215.44 Aligned_cols=260 Identities=22% Similarity=0.297 Sum_probs=190.5
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeee-eecCccccC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDV-FHSNTCLAD 141 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~-~~~~~~~~~ 141 (427)
..|+|.+.+|+|.||.+-. +-++.+.+.+++|.+.++. ...+.+.||...--.| .|.||+.-|++ |++
T Consensus 24 d~y~I~k~lgeG~FgkIlL-~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt------ 93 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILL-AEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQT------ 93 (378)
T ss_pred hhhhHHHHhcccceeeEEe-eeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhc------
Confidence 5688999999999999985 5677889999999987643 3456688898766666 58899998876 333
Q ss_pred CceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc--CCCCEEEeeCCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN--EDCELKILDFGLARPT 218 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~--~~~~~kl~DFGla~~~ 218 (427)
.+.+++++|++ -|+|.+-+...++.|.-.+.++.|+++|+.|||++++||||||.+||||- +..++||||||+++..
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred CceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 24566788887 68999888778899999999999999999999999999999999999984 3458999999998765
Q ss_pred CCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 219 ENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 219 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
+......--+..|.|||+..... .+
T Consensus 174 g~tV~~~~~~~~y~~pe~~~~~~---------------------ne---------------------------------- 198 (378)
T KOG1345|consen 174 GTTVKYLEYVNNYHAPELCDTVV---------------------NE---------------------------------- 198 (378)
T ss_pred CceehhhhhhcccCCcHHHhhcc---------------------cc----------------------------------
Confidence 54333333345577888754210 00
Q ss_pred hhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcC-cHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCC-
Q psy8260 299 LNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKIS-SDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKR- 376 (427)
Q Consensus 299 ~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R- 376 (427)
.....+.+|+|++|+|++.+.++.+|+-.... ......+......... ...+.|+..|+.|..+.++-|..+|++|
T Consensus 199 -~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~-~~P~~F~~fs~~a~r~Fkk~lt~~~~drc 276 (378)
T KOG1345|consen 199 -KLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP-ALPKKFNPFSEKALRLFKKSLTPRFKDRC 276 (378)
T ss_pred -ceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc-cCchhhcccCHHHHHHHHHhcCCcccccc
Confidence 00133456999999999888777777653321 1222223222221111 2345577789999999999999999999
Q ss_pred --CCHHHHhcCCCCCC
Q psy8260 377 --ITAEQALAHPYLSQ 390 (427)
Q Consensus 377 --~ta~e~L~Hp~f~~ 390 (427)
.++......-|...
T Consensus 277 ki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 277 KIWTAKKMRKCLWKEK 292 (378)
T ss_pred hhHHHHHHHHHHHHHh
Confidence 77788888888753
No 402
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=2.2e-25 Score=217.86 Aligned_cols=161 Identities=22% Similarity=0.286 Sum_probs=124.0
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCC---CHHHHHHHHHHHHHHhcCCCCCcee-eeeeeecCcc
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQ---SAVHAKRTYRELRMLKHMNHENVIG-LLDVFHSNTC 138 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~-l~~~~~~~~~ 138 (427)
.+.|.+++.||+|+||.||++.....+++.||||++..... .......+.+|+++|++++|+||+. ++++
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~------ 90 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT------ 90 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc------
Confidence 45689999999999999997655545788899998753211 2334456789999999999999985 4432
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccC-CCCCeEEcCCCCEEEeeCCCCC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDL-KPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDL-Kp~NILl~~~~~~kl~DFGla~ 216 (427)
...|++||++ |++|.. .. ... ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+
T Consensus 91 ----~~~~LVmE~~~G~~L~~-~~--~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHL-AR--PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred ----CCcEEEEEccCCCCHHH-hC--ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 2368999988 667763 21 111 1467889999999999999999999 9999999999999999999998
Q ss_pred CCCCC-----------cccccccccccchhhhhc
Q psy8260 217 PTENE-----------MTGYVATRWYRAPEIMLN 239 (427)
Q Consensus 217 ~~~~~-----------~~~~~gt~~y~aPE~l~~ 239 (427)
..... .++..++..|+|||.+..
T Consensus 161 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 161 VFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 54332 234567888999999864
No 403
>KOG0590|consensus
Probab=99.93 E-value=1.3e-26 Score=240.61 Aligned_cols=264 Identities=25% Similarity=0.281 Sum_probs=180.7
Q ss_pred eccccCcccccEEEEeEEeCcCCcEEEEEEccC---cCCCHHH-HHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 68 IGPTLSKESFDLIFSSALDSVSGVKVAIKKIAR---PFQSAVH-AKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 68 ~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~---~~~~~~~-~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.+..+|.|++|.|+. +.........+.|.... ....... ...+..|..+-..+.|||++..+..+... .
T Consensus 322 ~~~~~g~ga~g~~~~-~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~------~ 394 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRI-AKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI------D 394 (601)
T ss_pred ccceeeecccCceEE-EEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc------c
Confidence 456788899886653 33444444444443321 1112222 22255678788889999998777665432 2
Q ss_pred eEEEEeccCCCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 144 NVYMVTHLMGADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 144 ~~~lv~e~~g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
..+-.||++.+||..++... .+...++..+++|++.|++|||+.||.||||||+|+++..+|.+||+|||.+.......
T Consensus 395 ~~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 395 GILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cchhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 23344888866999888765 79999999999999999999999999999999999999999999999999875322110
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 302 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~ 302 (427)
. . ......+.+|+-.|+|||++.+..
T Consensus 475 e----------------------------------~--------------------~~~~~~g~~gS~pY~apE~~~~~~ 500 (601)
T KOG0590|consen 475 E----------------------------------K--------------------NIHESSGIVGSDPYLAPEVLTGKE 500 (601)
T ss_pred c----------------------------------h--------------------hhhhhcCcccCCcCcCcccccccc
Confidence 0 0 001345667888888888887777
Q ss_pred CCCC-CCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHh-cCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHH
Q psy8260 303 HYNQ-TDIHQLNLIMEMLGTPPAEFMAKISSDSARKYIN-SLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAE 380 (427)
Q Consensus 303 ~~~~-~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~ 380 (427)
|... .|+|+.|+|+..|-++..+|......+....... ............++..+....+.+|.+||++||.+|+|++
T Consensus 501 ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~ 580 (601)
T KOG0590|consen 501 YDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIE 580 (601)
T ss_pred cCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHH
Confidence 7764 4999999988777666666543322221101110 0111111223345555677889999999999999999999
Q ss_pred HHhcCCCCCCCC
Q psy8260 381 QALAHPYLSQYS 392 (427)
Q Consensus 381 e~L~Hp~f~~~~ 392 (427)
++++.+||+...
T Consensus 581 ~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 581 QILNDEWIRSIE 592 (601)
T ss_pred HHhhChHhhhcc
Confidence 999999998764
No 404
>KOG1025|consensus
Probab=99.93 E-value=1.9e-25 Score=226.32 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=182.0
Q ss_pred eeeccccCcccccEEEEeEEeCc---CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSV---SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
..-.++||.|+||.||+|.+-.+ -..+||||++.. +........++.|+-+|.+++|||+++|+++....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~-~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------ 770 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIE-FTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------ 770 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeec-cCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------
Confidence 34567999999999999988544 124689998754 34555567788999999999999999999986542
Q ss_pred ceEEEEeccC-CCCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~ 219 (427)
.+-+++.++ .|.|.++++. .++.......|..||++||.|||.++++||||..+|||+.....+||.|||+|+...
T Consensus 771 -~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 771 -TLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred -hHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 244566665 7899998865 468888999999999999999999999999999999999999999999999998654
Q ss_pred CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 220 NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 220 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
..... |.||+ ..-.+-|||-|.++
T Consensus 850 ~d~~e------y~~~~--------------------------------------------------gK~pikwmale~i~ 873 (1177)
T KOG1025|consen 850 PDEKE------YSAPG--------------------------------------------------GKVPIKWMALESIR 873 (1177)
T ss_pred ccccc------ccccc--------------------------------------------------cccCcHHHHHHHhh
Confidence 43221 11211 01235688899999
Q ss_pred hccCCCCCCHHHHHHHHHHh-CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCC
Q psy8260 300 NWMHYNQTDIHQLNLIMEML-GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRIT 378 (427)
Q Consensus 300 ~~~~~~~~d~~slg~i~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~t 378 (427)
...+..++|+|+.|+.+.++ .++..|.. .+..++..+.++.-..+.. .+.-+-+..-++.+|+-.|+..||+
T Consensus 874 ~~~~thqSDVWsfGVtiWElmTFGa~Py~-gi~~~eI~dlle~geRLsq------PpiCtiDVy~~mvkCwmid~~~rp~ 946 (1177)
T KOG1025|consen 874 IRKYTHQSDVWSFGVTIWELMTFGAKPYD-GIPAEEIPDLLEKGERLSQ------PPICTIDVYMVMVKCWMIDADSRPT 946 (1177)
T ss_pred ccCCCchhhhhhhhhhHHHHHhcCCCccC-CCCHHHhhHHHhccccCCC------CCCccHHHHHHHHHHhccCcccCcc
Confidence 98999999999999877554 33333332 2333333333332111111 1234567778999999999999999
Q ss_pred HHHHh
Q psy8260 379 AEQAL 383 (427)
Q Consensus 379 a~e~L 383 (427)
++++-
T Consensus 947 fkel~ 951 (1177)
T KOG1025|consen 947 FKELA 951 (1177)
T ss_pred HHHHH
Confidence 98864
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=9.8e-25 Score=193.51 Aligned_cols=164 Identities=21% Similarity=0.249 Sum_probs=117.1
Q ss_pred CCHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccc
Q psy8260 154 ADLNNILRT--QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 231 (427)
Q Consensus 154 ~~L~~~l~~--~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y 231 (427)
|+|.++++. ..+++..+..++.|++.||.|||+++ ||+|||++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--------- 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ--------- 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecccc---------
Confidence 578888864 45999999999999999999999998 999999999999999 99876432110
Q ss_pred cchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHH
Q psy8260 232 RAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQ 311 (427)
Q Consensus 232 ~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~s 311 (427)
..||+.|||||++.+..+..++|+||
T Consensus 64 ------------------------------------------------------~~g~~~y~aPE~~~~~~~~~~~DiwS 89 (176)
T smart00750 64 ------------------------------------------------------SRVDPYFMAPEVIQGQSYTEKADIYS 89 (176)
T ss_pred ------------------------------------------------------CCCcccccChHHhcCCCCcchhhHHH
Confidence 13567777777777767777889999
Q ss_pred HHHHHHHhCCCCHHHHhhcC-cHHHHHHHhcCCCCCcccHHhhcCCCCh--hHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 312 LNLIMEMLGTPPAEFMAKIS-SDSARKYINSLPLLTKKDFRQVFKGANP--QAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 312 lg~i~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
+|++++.+.++..+|..... .................. .......+. ++++||.+||..||.+|||+.|+++|+|+
T Consensus 90 lG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 90 LGITLYEALDYELPYNEERELSAILEILLNGMPADDPRD-RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccc-cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 99999988766655543221 112222221111110000 000111222 68999999999999999999999999997
Q ss_pred C
Q psy8260 389 S 389 (427)
Q Consensus 389 ~ 389 (427)
.
T Consensus 169 ~ 169 (176)
T smart00750 169 L 169 (176)
T ss_pred H
Confidence 5
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.90 E-value=1.1e-22 Score=186.26 Aligned_cols=197 Identities=33% Similarity=0.542 Sum_probs=150.0
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceE
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNV 145 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~ 145 (427)
|.++..+|.|++|.||.+. ...+++.+|+|.+...... .....+.+|++.++.++|+|++++++.+... ...
T Consensus 1 ~~~~~~i~~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~------~~~ 72 (225)
T smart00221 1 YELGKKLGEGAFGKVYLAR-DKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDP------EPL 72 (225)
T ss_pred CceeeEeecCCCeEEEEEE-EcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecC------Cce
Confidence 3567889999999999754 4557889999998754332 2455677899999999999999999887543 356
Q ss_pred EEEeccC-CCCHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCc
Q psy8260 146 YMVTHLM-GADLNNILRTQK--LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEM 222 (427)
Q Consensus 146 ~lv~e~~-g~~L~~~l~~~~--l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~ 222 (427)
+++++++ +++|.+++.... +++..+..++.|++.++.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 73 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 73 YLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred EEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 7888877 459999886643 8999999999999999999999999999999999999999999999999886543221
Q ss_pred ccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh-hhc
Q psy8260 223 TGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM-LNW 301 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl-~~~ 301 (427)
.. ......++..|++||++ ...
T Consensus 153 ~~---------------------------------------------------------~~~~~~~~~~~~~pe~~~~~~ 175 (225)
T smart00221 153 AA---------------------------------------------------------LLKTVKGTPFYLAPEVLLGGK 175 (225)
T ss_pred cc---------------------------------------------------------cccceeccCCcCCHhHhcCCC
Confidence 00 00112344556666665 333
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHH
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFM 327 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~ 327 (427)
.+...+|+|++|++++.+.++..+|.
T Consensus 176 ~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 176 GYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 34457799999999887766666663
No 407
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=3e-21 Score=184.79 Aligned_cols=265 Identities=29% Similarity=0.440 Sum_probs=180.9
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHH-HHHHHHHHHHHHhcCCCC-CceeeeeeeecCccccCCc
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAV-HAKRTYRELRMLKHMNHE-NVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~Ei~~l~~l~Hp-nIv~l~~~~~~~~~~~~~~ 143 (427)
|.+...+|.|+|+.||.+... ..+|+|.+........ ....+.+|+.++..+.|+ ||+.+.+.+... .
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~------~ 71 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR----KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE------G 71 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec----cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC------C
Confidence 456778999999877765433 7899999876544433 466788999999999988 799999998443 2
Q ss_pred eEEEEeccC-CCCHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC-CEEEeeCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRTQ----KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-ELKILDFGLARP 217 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~----~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~-~~kl~DFGla~~ 217 (427)
..+++++++ ++++.+++... .+++..+..++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||+++.
T Consensus 72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~ 151 (384)
T COG0515 72 SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKL 151 (384)
T ss_pred EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCccee
Confidence 357777776 67888777654 689999999999999999999999999999999999999888 799999999873
Q ss_pred CCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHH
Q psy8260 218 TENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEI 297 (427)
Q Consensus 218 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEv 297 (427)
........... .......||..|+|||+
T Consensus 152 ~~~~~~~~~~~----------------------------------------------------~~~~~~~~t~~~~~pe~ 179 (384)
T COG0515 152 LPDPGSTSSIP----------------------------------------------------ALPSTSVGTPGYMAPEV 179 (384)
T ss_pred cCCCCcccccc----------------------------------------------------ccccccccccccCCHHH
Confidence 32211000000 01234457777777777
Q ss_pred hhh---ccCCCCCCHHHHHHHHHHhCCCCHHHHhhcC---cHHHHHHHhcCCCC--CcccHHhhcCCCChhHHHHHHHhc
Q psy8260 298 MLN---WMHYNQTDIHQLNLIMEMLGTPPAEFMAKIS---SDSARKYINSLPLL--TKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 298 l~~---~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
+.+ .......|+|++|++++.+..+..++..... .............. ...............+.+++.+++
T Consensus 180 ~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (384)
T COG0515 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLL 259 (384)
T ss_pred hcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHH
Confidence 766 3455567999999777655443333322221 11111222111110 000000000111247889999999
Q ss_pred CCCCCCCCCHHHHhcCCCCCCCC
Q psy8260 370 ELDSEKRITAEQALAHPYLSQYS 392 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~Hp~f~~~~ 392 (427)
..+|..|.+..+...++|.....
T Consensus 260 ~~~~~~r~~~~~~~~~~~~~~~~ 282 (384)
T COG0515 260 AKDPKNRLSSSSDLSHDLLAHLK 282 (384)
T ss_pred hcCchhcCCHHHHhhchHhhCcc
Confidence 99999999999999998776543
No 408
>KOG1024|consensus
Probab=99.88 E-value=3.2e-22 Score=188.50 Aligned_cols=254 Identities=17% Similarity=0.259 Sum_probs=179.8
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCc----CCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeec
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSV----SGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHS 135 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~----~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 135 (427)
.+.+.++.+...+.+|.||.||++.+... +.+.|-+|.++. ..++.+...++.|...+..+.|||+..+.++...
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 45566788889999999999999966432 235577887754 3456677778899999999999999999988543
Q ss_pred CccccCCceEEEEeccCC-CCHHHHHhh---------CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC
Q psy8260 136 NTCLADFKNVYMVTHLMG-ADLNNILRT---------QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 205 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~g-~~L~~~l~~---------~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~ 205 (427)
+....++...+.| |+|..++.- +.++..+...++.|++.|++|||++||||.||..+|++||+..
T Consensus 359 -----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 359 -----DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQL 433 (563)
T ss_pred -----ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhe
Confidence 2233455555554 789988861 2366677888999999999999999999999999999999999
Q ss_pred CEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccc
Q psy8260 206 ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTG 285 (427)
Q Consensus 206 ~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~ 285 (427)
.+||+|=.++|..........|-.
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDn-------------------------------------------------------- 457 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDN-------------------------------------------------------- 457 (563)
T ss_pred eEEeccchhccccCcccccccCCC--------------------------------------------------------
Confidence 999999888875432110000000
Q ss_pred ccccccccchHHhhhccCCCCCCHHHHHHHHHHh---CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHH
Q psy8260 286 YVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEML---GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAI 362 (427)
Q Consensus 286 ~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 362 (427)
.--..-||+||-+.+..+..++|+|++|+.+.+| |..|. .+++..+...++..--.+ .+- -+..++.-
T Consensus 458 EnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Py---aeIDPfEm~~ylkdGyRl-----aQP-~NCPDeLf 528 (563)
T KOG1024|consen 458 ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPY---AEIDPFEMEHYLKDGYRL-----AQP-FNCPDELF 528 (563)
T ss_pred CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCc---cccCHHHHHHHHhcccee-----cCC-CCCcHHHH
Confidence 0012458899988888888999999999988655 33331 122223333343321111 111 12345677
Q ss_pred HHHHHhcCCCCCCCCCHHHHhc
Q psy8260 363 DLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 363 dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
..+..|-..+|++||+.+|+..
T Consensus 529 ~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 529 TVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHHHHHhcCcccCCCHHHHHH
Confidence 8899999999999999999764
No 409
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.87 E-value=5e-22 Score=178.60 Aligned_cols=139 Identities=18% Similarity=0.255 Sum_probs=104.3
Q ss_pred ccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHH------------------------HHHHHHHHHHHhcCCCC
Q psy8260 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVH------------------------AKRTYRELRMLKHMNHE 124 (427)
Q Consensus 69 ~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~------------------------~~~~~~Ei~~l~~l~Hp 124 (427)
...||.|+||.||.+.. . +|+.||||++......... .....+|++++.++.++
T Consensus 2 ~~~ig~G~~~~Vy~a~~-~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATT-A-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA 79 (190)
T ss_pred CCccccccceEEEEEEC-C-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 36799999999997644 4 8999999998654211100 11224599999999888
Q ss_pred CceeeeeeeecCccccCCceEEEEeccCCC-CHHHH-HhhCCCCHHHHHHHHHHHHHHHHHH-HhcCceeccCCCCCeEE
Q psy8260 125 NVIGLLDVFHSNTCLADFKNVYMVTHLMGA-DLNNI-LRTQKLSDDHVQFLVYQILRGLKYI-HSAGIIHRDLKPSNIAV 201 (427)
Q Consensus 125 nIv~l~~~~~~~~~~~~~~~~~lv~e~~g~-~L~~~-l~~~~l~~~~~~~~~~qi~~aL~yL-H~~~iiHrDLKp~NILl 201 (427)
++.....+.. ...+++||++++ ++... +....+++..+..++.|++.+|.|+ |+.||+||||||+|||+
T Consensus 80 ~v~~p~~~~~--------~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli 151 (190)
T cd05147 80 GIPCPEPILL--------KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY 151 (190)
T ss_pred CCCCCcEEEe--------cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 7643332211 123789998854 44433 4556799999999999999999999 79999999999999999
Q ss_pred cCCCCEEEeeCCCCCCC
Q psy8260 202 NEDCELKILDFGLARPT 218 (427)
Q Consensus 202 ~~~~~~kl~DFGla~~~ 218 (427)
+ ++.++|+|||+|...
T Consensus 152 ~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 152 H-DGKLYIIDVSQSVEH 167 (190)
T ss_pred E-CCcEEEEEccccccC
Confidence 8 478999999998754
No 410
>KOG0603|consensus
Probab=99.87 E-value=3.4e-23 Score=206.47 Aligned_cols=239 Identities=21% Similarity=0.323 Sum_probs=176.4
Q ss_pred ccCcccccEEEEeE--EeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCCceEEE
Q psy8260 71 TLSKESFDLIFSSA--LDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 71 ~lg~g~fg~v~~~~--~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
++|.|.||.|+... -....|..+|+|+..+.............|-.++..++ ||.+|++...|+.+ ...++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~------~kl~l 74 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTD------GKLYL 74 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccc------cchhH
Confidence 36889999888432 23456778999988765332222223345777788886 99999999888765 34567
Q ss_pred EeccC-CCCHHHHHh-hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccc
Q psy8260 148 VTHLM-GADLNNILR-TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 225 (427)
Q Consensus 148 v~e~~-g~~L~~~l~-~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 225 (427)
+.++. |++|...+. ...+.+...+.+...++.|++++|+.+|+|||+|++||+++.+|.+|+.|||+++..-....
T Consensus 75 ~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-- 152 (612)
T KOG0603|consen 75 ILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-- 152 (612)
T ss_pred hhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh--
Confidence 77766 667766554 45678888889999999999999999999999999999999999999999999874322111
Q ss_pred cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCC
Q psy8260 226 VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYN 305 (427)
Q Consensus 226 ~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~ 305 (427)
.|||..||||||+. .+..
T Consensus 153 ------------------------------------------------------------~cgt~eymApEI~~--gh~~ 170 (612)
T KOG0603|consen 153 ------------------------------------------------------------ACGTYEYRAPEIIN--GHLS 170 (612)
T ss_pred ------------------------------------------------------------cccchhhhhhHhhh--ccCC
Confidence 15666666666666 3566
Q ss_pred CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCH-----H
Q psy8260 306 QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITA-----E 380 (427)
Q Consensus 306 ~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta-----~ 380 (427)
..|+|++|.+++.|.++..+|.. +..+.+....... .+..+.+|++++..|+..+|.+|.-+ .
T Consensus 171 a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~--------p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~ 238 (612)
T KOG0603|consen 171 AADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEM--------PRELSAEARSLFRQLFKRNPENRLGAGPDGVD 238 (612)
T ss_pred cccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCC--------chhhhHHHHHHHHHHHhhCHHHHhccCcchhH
Confidence 67999999999999888877755 2222222211111 23467899999999999999999854 8
Q ss_pred HHhcCCCCCCC
Q psy8260 381 QALAHPYLSQY 391 (427)
Q Consensus 381 e~L~Hp~f~~~ 391 (427)
|+++|+||...
T Consensus 239 eik~h~f~~~i 249 (612)
T KOG0603|consen 239 EIKQHEFFQSI 249 (612)
T ss_pred HHhccchheee
Confidence 99999999864
No 411
>KOG1165|consensus
Probab=99.87 E-value=3.9e-21 Score=177.97 Aligned_cols=204 Identities=22% Similarity=0.363 Sum_probs=148.8
Q ss_pred ccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccc
Q psy8260 61 ICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCL 139 (427)
Q Consensus 61 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~ 139 (427)
+..-.|.+|+.||+|+||..+.+ .+.-+++.||||.=.+ .....+.. -|.+..+.| .-++|.+.|.+-. |
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G-~Nl~nne~VAIKfEPr-kS~APQLr---dEYr~YKlL~g~~GIP~vYYFGq---e- 95 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLG-KNLYNNEPVAIKFEPR-KSEAPQLR---DEYRTYKLLGGTEGIPQVYYFGQ---E- 95 (449)
T ss_pred EecccceeccccccCcceeeecc-cccccCceEEEEeccc-cCCcchHH---HHHHHHHHHcCCCCCCceeeecc---c-
Confidence 44556899999999999999975 4667899999995432 22333333 344444444 4578888775422 1
Q ss_pred cCCceEEEEeccCCCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC-----CCEEEeeC
Q psy8260 140 ADFKNVYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED-----CELKILDF 212 (427)
Q Consensus 140 ~~~~~~~lv~e~~g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~-----~~~kl~DF 212 (427)
..+-.+|++++|.+|.++.. ..+|+...+..++.|++.-++|+|++.+|.|||||+|+||+.. ..+.|+||
T Consensus 96 --G~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 96 --GKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred --cchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEec
Confidence 13346899999999998864 5679999999999999999999999999999999999999743 46899999
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
|+|+. |+.|+.-.. ..|. ......||-.|
T Consensus 174 GmAK~-------------YrDp~TkqH-IPYr-------------------------------------E~KSLsGTARY 202 (449)
T KOG1165|consen 174 GMAKE-------------YRDPKTKQH-IPYR-------------------------------------EHKSLSGTARY 202 (449)
T ss_pred cchhh-------------hcCcccccc-Cccc-------------------------------------cccccccceee
Confidence 99974 455543211 1111 23345688888
Q ss_pred cchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHH
Q psy8260 293 RAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEF 326 (427)
Q Consensus 293 ~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~ 326 (427)
|+.-.-++..-....|+.+||-++..+..+..||
T Consensus 203 MSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPW 236 (449)
T KOG1165|consen 203 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 236 (449)
T ss_pred eEeeccccchhhhhhhHHHhhhhhhhhccCCCcc
Confidence 8887777777777789999997765554455554
No 412
>KOG1164|consensus
Probab=99.86 E-value=1.3e-20 Score=183.71 Aligned_cols=260 Identities=23% Similarity=0.291 Sum_probs=170.5
Q ss_pred ceeeccccCcccccEEEEeEEeCcC-CcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCC----CCceeeeeeeecCccc
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVS-GVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNH----ENVIGLLDVFHSNTCL 139 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~-g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~H----pnIv~l~~~~~~~~~~ 139 (427)
.|.+.+.||+|+||.||.+. +..+ ...+|+|......... ...+..|+.++..+.. +++..+++....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~-~~~~~~~~~a~K~e~~~~~~~--~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~---- 91 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVS-DKSEKNKEYAKKLEKKELGSK--PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRS---- 91 (322)
T ss_pred ceEEeeeccccCCceEEEEE-ecCCCCeeEEEEEEEecccCC--CccchhHHHHHHHHhhhcCCCCCCEEEEeccC----
Confidence 78999999999999999754 4333 4678888765432111 1135568888887763 578888877631
Q ss_pred cCCceEEEEeccCCCCHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC-----CCEEEee
Q psy8260 140 ADFKNVYMVTHLMGADLNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED-----CELKILD 211 (427)
Q Consensus 140 ~~~~~~~lv~e~~g~~L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~-----~~~kl~D 211 (427)
....-|+||.+.|.+|.++.+. +.++...+..++.|++.+|++||+.|+|||||||+|++++.. ..+.|.|
T Consensus 92 -~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 92 -TEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred -CCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 1235689999999999998753 569999999999999999999999999999999999999854 4699999
Q ss_pred CCCCCCCC--CCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccc
Q psy8260 212 FGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 289 (427)
Q Consensus 212 FGla~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt 289 (427)
||+|+... ...... .+.| ......+.||
T Consensus 171 fGlar~~~~~~~~~~~-----~~~~---------------------------------------------r~~~~~~rGT 200 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGN-----LRPP---------------------------------------------RPQKGLFRGT 200 (322)
T ss_pred cCCCccccccCCCCcc-----cccC---------------------------------------------CCCccCCCCc
Confidence 99998322 111000 0000 0012345689
Q ss_pred ccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 290 RWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 290 ~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
..|.++.+-.+.......|+||+..++..+..+..|+..........++.......... ........+..++...+-
T Consensus 201 ~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 277 (322)
T KOG1164|consen 201 LRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTD---RFGDLKPEEFAKILEYID 277 (322)
T ss_pred cccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccc---cccCCChHHHHHHHHHhh
Confidence 99999999888888899999999877655544433332111111111111100000000 011112345556666666
Q ss_pred CCCCCCCCCHHHHhcC
Q psy8260 370 ELDSEKRITAEQALAH 385 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~H 385 (427)
..+...+|.-..+.+.
T Consensus 278 ~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 278 SLDYEDKPDYEKLAEL 293 (322)
T ss_pred ccCCcCCCCHHHHHHH
Confidence 6788888877766555
No 413
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=3.4e-21 Score=173.43 Aligned_cols=141 Identities=20% Similarity=0.248 Sum_probs=108.0
Q ss_pred ccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC----------------------HH--HHHHHHHHHHHHhcCCCC
Q psy8260 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS----------------------AV--HAKRTYRELRMLKHMNHE 124 (427)
Q Consensus 69 ~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~----------------------~~--~~~~~~~Ei~~l~~l~Hp 124 (427)
...||.|+||.||.+.. . +|+.||||++...... .. ......+|.+.+.++.|+
T Consensus 2 ~~~ig~G~~~~Vy~a~~-~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHART-G-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CceeecCCCcEEEEEEc-C-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 46799999999997654 3 8999999998754211 00 012235799999999999
Q ss_pred CceeeeeeeecCccccCCceEEEEeccCCCC-H-HHHHhhCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEE
Q psy8260 125 NVIGLLDVFHSNTCLADFKNVYMVTHLMGAD-L-NNILRTQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAV 201 (427)
Q Consensus 125 nIv~l~~~~~~~~~~~~~~~~~lv~e~~g~~-L-~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl 201 (427)
+|.....+... ..|++||++++. + ...+....+++..+..++.|++.+|.++|+ +||+||||||+|||+
T Consensus 80 ~i~~p~~~~~~--------~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll 151 (190)
T cd05145 80 GVPVPEPILLK--------KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY 151 (190)
T ss_pred CCCCceEEEec--------CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE
Confidence 87544433221 137899998543 3 344556678889999999999999999999 999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCC
Q psy8260 202 NEDCELKILDFGLARPTEN 220 (427)
Q Consensus 202 ~~~~~~kl~DFGla~~~~~ 220 (427)
+ ++.++|+|||+++....
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 88999999999976543
No 414
>KOG1163|consensus
Probab=99.86 E-value=6.9e-21 Score=169.30 Aligned_cols=149 Identities=23% Similarity=0.376 Sum_probs=117.0
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCC-CCceeeeeeeecCcc
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNH-ENVIGLLDVFHSNTC 138 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~H-pnIv~l~~~~~~~~~ 138 (427)
.+..+.|.+.+.||.|+||-+|. +....+|..||||.=...... -+...|..+.+.|+| ..|..+..++...
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~-~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~-- 83 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYL-GISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEK-- 83 (341)
T ss_pred heeccceEEEEeecCCchhheee-eeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhcccc--
Confidence 45678899999999999999996 467789999999964322111 235568888887766 3455544443322
Q ss_pred ccCCceEEEEeccCCCCHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC---CCCEEEeeCC
Q psy8260 139 LADFKNVYMVTHLMGADLNNILR--TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE---DCELKILDFG 213 (427)
Q Consensus 139 ~~~~~~~~lv~e~~g~~L~~~l~--~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~---~~~~kl~DFG 213 (427)
.+-.+||++.|.+|.++.. ...|+...+..++.|++.-++|+|.+++|||||||+|+|++- ...+-++|||
T Consensus 84 ----~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG 159 (341)
T KOG1163|consen 84 ----DYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG 159 (341)
T ss_pred ----ccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEecc
Confidence 3347899999999998874 467999999999999999999999999999999999999864 3578999999
Q ss_pred CCCCCC
Q psy8260 214 LARPTE 219 (427)
Q Consensus 214 la~~~~ 219 (427)
+|+...
T Consensus 160 LaKky~ 165 (341)
T KOG1163|consen 160 LAKKYR 165 (341)
T ss_pred chhhhc
Confidence 998543
No 415
>PRK10345 hypothetical protein; Provisional
Probab=99.85 E-value=9.9e-21 Score=172.05 Aligned_cols=135 Identities=18% Similarity=0.258 Sum_probs=104.9
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-----CCCCceeeeeeeecCccccCCce
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-----NHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
..||+|+|+.||. +..++.+ +||++..... ...+.+.+|+.+++.+ +||||++++++++++.. ...
T Consensus 8 ~~LG~G~~~~Vy~---hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g---~g~ 78 (210)
T PRK10345 8 SPLGTGRHRKCYA---HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG---TGY 78 (210)
T ss_pred ceecCCCceEEEE---CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC---CeE
Confidence 6799999999993 5566666 6998865322 2345678999999999 67999999999987521 123
Q ss_pred EE-EEeccCC---CCHHHHHhhCCCCHHHHHHHHHHHHHHH-HHHHhcCceeccCCCCCeEEcC----CCCEEEeeCCCC
Q psy8260 145 VY-MVTHLMG---ADLNNILRTQKLSDDHVQFLVYQILRGL-KYIHSAGIIHRDLKPSNIAVNE----DCELKILDFGLA 215 (427)
Q Consensus 145 ~~-lv~e~~g---~~L~~~l~~~~l~~~~~~~~~~qi~~aL-~yLH~~~iiHrDLKp~NILl~~----~~~~kl~DFGla 215 (427)
++ +++++.| ++|.++++...+++. ..++.|++.++ +|||+++|+||||||+|||++. +..++|+||+.+
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 34 6788865 799999987777766 35678888888 9999999999999999999974 237999995444
No 416
>KOG0606|consensus
Probab=99.85 E-value=1.2e-21 Score=204.44 Aligned_cols=238 Identities=20% Similarity=0.289 Sum_probs=160.2
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
...|+..+.+..|++|.||. ..++.+.+++|+ ++++... +.|- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavyl-vrh~~trqrfa~-kiNkq~l-------ilRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYL-VRHKETRQRFAM-KINKQNL-------ILRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceee-eeccccccchhh-cccccch-------hhhc--cccccCCccee---------------
Confidence 45677788999999999996 557788899999 4543211 1111 22223333333
Q ss_pred ceEEEEeccCCCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC
Q psy8260 143 KNVYMVTHLMGADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE 221 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~ 221 (427)
||-..+++. +.++. +.+.+++|||+-||+|||+||+|.||..-|.+|+.|||+++...-.
T Consensus 136 -----------gDc~tllk~~g~lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 -----------GDCATLLKNIGPLPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred -----------chhhhhcccCCCCcc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 222233332 23443 2378999999999999999999999999999999999998743221
Q ss_pred cccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc
Q psy8260 222 MTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 222 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.++ . +.+ +.++. | ..+..-.+.+|||.|+||||+...
T Consensus 197 ~at----n--------------------------------l~e-g~I~k-~-----t~Ef~dKqvcgTPeyiaPeVilrq 233 (1205)
T KOG0606|consen 197 LAT----N--------------------------------LKE-GHIEK-D-----THEFQDKQVCGTPEYIAPEVILRQ 233 (1205)
T ss_pred ccc----h--------------------------------hhh-cchHH-H-----HHHhhhccccCCccccChhhhhhh
Confidence 111 0 000 00000 0 001122456899999999999998
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCC---C
Q psy8260 302 MHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRI---T 378 (427)
Q Consensus 302 ~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~---t 378 (427)
.|+..+|||++|+|+|++..+-.+|.....++....++.....++. .-....+|++|+|.+||+.+|..|. .
T Consensus 234 gygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE-----~dea~p~Ea~dli~~LL~qnp~~Rlgt~g 308 (1205)
T KOG0606|consen 234 GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE-----EDEALPPEAQDLIEQLLRQNPLCRLGTGG 308 (1205)
T ss_pred ccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc-----cCcCCCHHHHHHHHHHHHhChHhhcccch
Confidence 9999999999999999887766666655433333333333222322 2345689999999999999999997 5
Q ss_pred HHHHhcCCCCCCCCC
Q psy8260 379 AEQALAHPYLSQYSD 393 (427)
Q Consensus 379 a~e~L~Hp~f~~~~~ 393 (427)
+-++.+|+||..+..
T Consensus 309 a~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 309 ALEVKQHGFFQLLDW 323 (1205)
T ss_pred hhhhhhccceeeccc
Confidence 778899999986543
No 417
>KOG4158|consensus
Probab=99.80 E-value=2.7e-19 Score=169.35 Aligned_cols=201 Identities=21% Similarity=0.308 Sum_probs=135.5
Q ss_pred CCCCceeeeeeeecCc---------------------cccCCceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy8260 122 NHENVIGLLDVFHSNT---------------------CLADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRG 180 (427)
Q Consensus 122 ~HpnIv~l~~~~~~~~---------------------~~~~~~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~a 180 (427)
+|||||++..+|.+.- .......+|++|.-...+|..++..+..+....+.++.|+++|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~~s~r~~~~~laQlLEa 353 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRHRSYRTGRVILAQLLEA 353 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 6999999998875421 1123456899999989999999998888888888899999999
Q ss_pred HHHHHhcCceeccCCCCCeEEc--CCC--CEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCC
Q psy8260 181 LKYIHSAGIIHRDLKPSNIAVN--EDC--ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLK 256 (427)
Q Consensus 181 L~yLH~~~iiHrDLKp~NILl~--~~~--~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~ 256 (427)
+.|||++||.|||||.+|||+. +++ .+.|+|||.+-...+..- -++|.
T Consensus 354 v~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGl-----------------------qlpy~----- 405 (598)
T KOG4158|consen 354 VTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGL-----------------------QLPYE----- 405 (598)
T ss_pred HHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecccccc-----------------------ccccc-----
Confidence 9999999999999999999983 443 578999997643221100 00000
Q ss_pred cccccccccchhhhhccCCCCCCccccccccccccccchHHhhhcc------CCCCCCHHHHHHHHHHhCCCCHHHHhhc
Q psy8260 257 PSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWM------HYNQTDIHQLNLIMEMLGTPPAEFMAKI 330 (427)
Q Consensus 257 ~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~------~~~~~d~~slg~i~~~lg~~~~~~~~~~ 330 (427)
.......|.-.-|||||..-.+ -+.+.|.|+.|.+.|+.-....||...-
T Consensus 406 ------------------------S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG 461 (598)
T KOG4158|consen 406 ------------------------SDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG 461 (598)
T ss_pred ------------------------cccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc
Confidence 0001112333345555554322 2456799999999877755556665411
Q ss_pred C-cHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHH
Q psy8260 331 S-SDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQ 381 (427)
Q Consensus 331 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e 381 (427)
. .-+.+. +....+......+.|.+++|+..+|+.||+||++++=
T Consensus 462 em~L~~r~-------Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i 506 (598)
T KOG4158|consen 462 EMLLDTRT-------YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI 506 (598)
T ss_pred hheechhh-------hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence 0 001111 2222333344567899999999999999999998654
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1e-18 Score=159.69 Aligned_cols=148 Identities=18% Similarity=0.211 Sum_probs=112.3
Q ss_pred cccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHH-HHH------HHHHHHHHhcCCCCCceeeeee
Q psy8260 60 EICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVH-AKR------TYRELRMLKHMNHENVIGLLDV 132 (427)
Q Consensus 60 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~-~~~------~~~Ei~~l~~l~HpnIv~l~~~ 132 (427)
.+..+.|.+.+.+|.|+||.||. + +. ++..+|||.+......... ... +.+|++.+.++.||+|....++
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l-~-~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSL-I-DT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEE-E-ec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 44568899999999999999996 3 33 4778999998654433322 222 4689999999999999999888
Q ss_pred eecCcc--ccCCceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEE
Q psy8260 133 FHSNTC--LADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI 209 (427)
Q Consensus 133 ~~~~~~--~~~~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl 209 (427)
+..... .......+++||++ |.+|.++. .+++. ...+++.+|..||+.|++|||+||+||+++.+| ++|
T Consensus 104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~---~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~l 175 (232)
T PRK10359 104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMP---EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRI 175 (232)
T ss_pred eeecccccccccCCeEEEEEEECCccHHHhh---hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEE
Confidence 653211 11123578899988 55787763 23332 456999999999999999999999999999888 999
Q ss_pred eeCCCCCCC
Q psy8260 210 LDFGLARPT 218 (427)
Q Consensus 210 ~DFGla~~~ 218 (427)
+|||..+..
T Consensus 176 iDfg~~~~~ 184 (232)
T PRK10359 176 IDLSGKRCT 184 (232)
T ss_pred EECCCcccc
Confidence 999987654
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=2e-18 Score=154.74 Aligned_cols=133 Identities=21% Similarity=0.195 Sum_probs=101.0
Q ss_pred eeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC--HHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCCc
Q psy8260 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS--AVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 67 ~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~--~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~ 143 (427)
.+...|+.|+||.|+.. ...+.+++.+.+...... ......+.+|+++|++++ |++|++++++.
T Consensus 5 ~~~~~l~~~~f~~v~~~---~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------- 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLV---RGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------- 71 (218)
T ss_pred ccceeecCCCcceEEEe---ecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc----------
Confidence 45678999999999943 237888888777543221 112234678999999995 58899998761
Q ss_pred eEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccC-CCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDL-KPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDL-Kp~NILl~~~~~~kl~DFGla~~~ 218 (427)
..+++|++. |.+|.+.... . ...++.|++.+|.++|++||+|||| ||+|||++.++.++|+|||+|...
T Consensus 72 ~~~lvmeyI~G~~L~~~~~~-----~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~ 142 (218)
T PRK12274 72 GRHLDRSYLAGAAMYQRPPR-----G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRG 142 (218)
T ss_pred CEEEEEeeecCccHHhhhhh-----h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceec
Confidence 257888886 6677654321 1 1347789999999999999999999 799999999999999999999743
No 420
>smart00090 RIO RIO-like kinase.
Probab=99.77 E-value=1.3e-18 Score=161.80 Aligned_cols=147 Identities=18% Similarity=0.201 Sum_probs=107.5
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC--------------------HH--HHHHHHHHHHHHhcCC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS--------------------AV--HAKRTYRELRMLKHMN 122 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~--------------------~~--~~~~~~~Ei~~l~~l~ 122 (427)
.|.+.+.||+|+||.||.+..+..+|+.||||++...... .. ....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999976435678999999988643210 00 1123468999999997
Q ss_pred CCCceeeeeeeecCccccCCceEEEEeccCCC-CHHHHH-hhCCCCHHHHHHHHHHHHHHHHHHHhcC-ceeccCCCCCe
Q psy8260 123 HENVIGLLDVFHSNTCLADFKNVYMVTHLMGA-DLNNIL-RTQKLSDDHVQFLVYQILRGLKYIHSAG-IIHRDLKPSNI 199 (427)
Q Consensus 123 HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~g~-~L~~~l-~~~~l~~~~~~~~~~qi~~aL~yLH~~~-iiHrDLKp~NI 199 (427)
+.+ +....++... ..+++||++++ +|.... ....+....+..++.|++.+|.+||++| |+||||||+||
T Consensus 109 ~~~-i~~p~~~~~~-------~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NI 180 (237)
T smart00090 109 EAG-VPVPKPIAWR-------RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNI 180 (237)
T ss_pred hcC-CCCCeeeEec-------CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhE
Confidence 633 2222232211 23788888855 554433 3445666677889999999999999999 99999999999
Q ss_pred EEcCCCCEEEeeCCCCCCCCC
Q psy8260 200 AVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 200 Ll~~~~~~kl~DFGla~~~~~ 220 (427)
+++ ++.++|+|||.|.....
T Consensus 181 li~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred EEE-CCCEEEEEChhhhccCC
Confidence 999 88999999999875443
No 421
>KOG1240|consensus
Probab=99.77 E-value=5.6e-19 Score=184.90 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=169.7
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcC--CCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPF--QSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
.++..+.||.+.|-.|.++ .++ .|. |+||+.-+.. .+-....+.++|++ ...++|||.+.+..+-...
T Consensus 24 e~~~~~~LGstRFlKv~r~-k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~------ 93 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARA-KDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD------ 93 (1431)
T ss_pred ceeeecccCchhhhhhhhc-cCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh------
Confidence 5677889999999988853 332 454 8899875532 22333455567777 6677999999887554332
Q ss_pred ceEEEEeccCCCCHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCC--
Q psy8260 143 KNVYMVTHLMGADLNNILRTQK-LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTE-- 219 (427)
Q Consensus 143 ~~~~lv~e~~g~~L~~~l~~~~-l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~-- 219 (427)
...|||-.|...+|++-+..++ +...+-+.|+.|++.||.-||..||.|+|||.|||||+.=+.+.|+||..-+...
T Consensus 94 kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 94 KAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence 3467888888889998887766 5667788899999999999999999999999999999999999999998766432
Q ss_pred --CC--cc----cccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccc
Q psy8260 220 --NE--MT----GYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRW 291 (427)
Q Consensus 220 --~~--~~----~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~ 291 (427)
+. .+ +...-.+|.|||-+.....+... +...
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~-----------------------------------------~q~~ 212 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSV-----------------------------------------GQDA 212 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhcccccccc-----------------------------------------CCcc
Confidence 11 11 11223358888876542111000 0000
Q ss_pred ccchHHhhhccCCCCCCHHHHHHHHHHh---CCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHh
Q psy8260 292 YRAPEIMLNWMHYNQTDIHQLNLIMEML---GTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLM 368 (427)
Q Consensus 292 Y~APEvl~~~~~~~~~d~~slg~i~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~m 368 (427)
. .+.+.-||+|+||++.+| |.|++.... ...|...........+.+ -.++..+.||..|
T Consensus 213 ~---------~L~paMDIFS~GCViaELf~Eg~PlF~LSQ------L~aYr~~~~~~~e~~Le~---Ied~~~Rnlil~M 274 (1431)
T KOG1240|consen 213 P---------LLTPAMDIFSAGCVIAELFLEGRPLFTLSQ------LLAYRSGNADDPEQLLEK---IEDVSLRNLILSM 274 (1431)
T ss_pred c---------ccChhhhhhhhhHHHHHHHhcCCCcccHHH------HHhHhccCccCHHHHHHh---CcCccHHHHHHHH
Confidence 0 033345999999988666 666665432 112222111111111111 2356789999999
Q ss_pred cCCCCCCCCCHHHHhcC
Q psy8260 369 LELDSEKRITAEQALAH 385 (427)
Q Consensus 369 L~~dP~~R~ta~e~L~H 385 (427)
+++||++|++|++.|+-
T Consensus 275 i~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 275 IQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HccCchhccCHHHHHHh
Confidence 99999999999999976
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.75 E-value=1.3e-18 Score=163.63 Aligned_cols=245 Identities=18% Similarity=0.192 Sum_probs=136.4
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH-HHHHHHHHHHHHHhcCCC----------CCceeeeeeee
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA-VHAKRTYRELRMLKHMNH----------ENVIGLLDVFH 134 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~l~H----------pnIv~l~~~~~ 134 (427)
+..++.||.|+++.||. +.+..||+.+|||+........ ...+++.+|.-....+.+ -.++--++...
T Consensus 14 l~~~~~i~~g~~~~v~~-v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFE-VTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEETTEEEEE-EEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEccccccCCceEEEE-EEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 45678999999999994 6788999999999875443222 234555555544433322 11222222211
Q ss_pred ---------cCcc--ccCCceEEEEeccCCCCHHHHHhh----CCC--CH-HHH-HHHHHHHHHHHHHHHhcCceeccCC
Q psy8260 135 ---------SNTC--LADFKNVYMVTHLMGADLNNILRT----QKL--SD-DHV-QFLVYQILRGLKYIHSAGIIHRDLK 195 (427)
Q Consensus 135 ---------~~~~--~~~~~~~~lv~e~~g~~L~~~l~~----~~l--~~-~~~-~~~~~qi~~aL~yLH~~~iiHrDLK 195 (427)
.... .....+.++.+.-+.++|..++.. ... .. ..+ ..+..|+++.+++||+.||+|+|||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 1000 000114466777778888877542 222 11 222 3345799999999999999999999
Q ss_pred CCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCC
Q psy8260 196 PSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGL 275 (427)
Q Consensus 196 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~ 275 (427)
|+|++++.+|.+.|+||+..............+..|.+||.......|..
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~------------------------------ 222 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQ------------------------------ 222 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHH------------------------------
T ss_pred eeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCc------------------------------
Confidence 99999999999999999876654443332344566778886532111100
Q ss_pred CCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcC
Q psy8260 276 ARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFK 355 (427)
Q Consensus 276 ~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (427)
....+....|.|+||+++|.+-+...||....... . ....|...-
T Consensus 223 -----------------------~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~--------~---~~~~f~~C~- 267 (288)
T PF14531_consen 223 -----------------------NNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEA--------D---PEWDFSRCR- 267 (288)
T ss_dssp -----------------------SEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGS--------T---SGGGGTTSS-
T ss_pred -----------------------ccceeeeccCHHHHHHHHHHHHHccCCCCCCCccc--------c---ccccchhcC-
Confidence 00113345699999999987754444442111000 0 000222222
Q ss_pred CCChhHHHHHHHhcCCCCCCC
Q psy8260 356 GANPQAIDLLSLMLELDSEKR 376 (427)
Q Consensus 356 ~~s~~~~dLi~~mL~~dP~~R 376 (427)
.+....++||.+||++||.+|
T Consensus 268 ~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 268 DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp ---HHHHHHHHHHT-SSGGGS
T ss_pred CcCHHHHHHHHHHccCCcccC
Confidence 456788999999999999988
No 423
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=1.4e-17 Score=150.85 Aligned_cols=138 Identities=22% Similarity=0.243 Sum_probs=102.2
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCH--------------------HHHHHHHHHHHHHhcCCCCC
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSA--------------------VHAKRTYRELRMLKHMNHEN 125 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~--------------------~~~~~~~~Ei~~l~~l~Hpn 125 (427)
+.+.+.||.|+||.||.+.. .+|+.||||++....... .......+|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALD--PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEc--CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 66778999999999997654 379999999865432110 01123567899999998875
Q ss_pred --ceeeeeeeecCccccCCceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc
Q psy8260 126 --VIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202 (427)
Q Consensus 126 --Iv~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~ 202 (427)
+...++. ...+++|+++ |++|..+... .....++.+++.++.++|+.||+||||||+||+++
T Consensus 95 i~v~~~~~~----------~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~ 159 (198)
T cd05144 95 FPVPKPIDW----------NRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD 159 (198)
T ss_pred CCCCceeec----------CCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc
Confidence 3333321 2347788877 5677654321 34567888999999999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCC
Q psy8260 203 EDCELKILDFGLARPTEN 220 (427)
Q Consensus 203 ~~~~~kl~DFGla~~~~~ 220 (427)
.++.++|+|||++.....
T Consensus 160 ~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 160 DDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCCcEEEEECCccccCCC
Confidence 999999999999865443
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=5.5e-17 Score=148.19 Aligned_cols=135 Identities=26% Similarity=0.339 Sum_probs=104.6
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-H-----HHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCc
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-A-----VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~-----~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 143 (427)
+.||+|++|.||.+.. .|..|+||+....... . ....++.+|+.++..+.|+||.....++... .
T Consensus 2 ~~l~~G~~~~vy~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~------~ 72 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF---LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP------E 72 (211)
T ss_pred cccccCceEEEEEEee---CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC------C
Confidence 4689999999997654 6788999976532211 1 1224567899999999999887665554322 2
Q ss_pred eEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
..+++|+++ |++|.+++.... . ....++.+++.+|.++|+.|++|||++|+|||++ ++.++|+|||+++.
T Consensus 73 ~~~lv~e~~~G~~L~~~~~~~~--~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 73 NFIIVMEYIEGEPLKDLINSNG--M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCEEEEEEeCCcCHHHHHHhcc--H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 457788877 778988876432 2 7778899999999999999999999999999999 78999999999864
No 425
>KOG0590|consensus
Probab=99.72 E-value=3.6e-19 Score=185.17 Aligned_cols=263 Identities=22% Similarity=0.293 Sum_probs=186.9
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC-CCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN-HENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~ 142 (427)
..+.+.+.+|+|+|+.|........+...+|+|.+...............|..+-..+. |.|++.+++.....
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~------ 93 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSP------ 93 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCC------
Confidence 34556677999999999866555566778899988765433444445556887777776 99999999876543
Q ss_pred ceEEEEeccC-CCCHHHHH-hhC--CCCHHHHHHHHHHHHHHHHHHH-hcCceeccCCCCCeEEcCCC-CEEEeeCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNIL-RTQ--KLSDDHVQFLVYQILRGLKYIH-SAGIIHRDLKPSNIAVNEDC-ELKILDFGLAR 216 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l-~~~--~l~~~~~~~~~~qi~~aL~yLH-~~~iiHrDLKp~NILl~~~~-~~kl~DFGla~ 216 (427)
...++..++. |+++...+ ... ..+...+..++.|+..|+.|+| ..++.|||+||+|.+++..+ .+|++|||+|.
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhc
Confidence 3456777776 67777666 332 5778889999999999999999 99999999999999999999 99999999986
Q ss_pred CCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccc-cccccch
Q psy8260 217 PTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVA-TRWYRAP 295 (427)
Q Consensus 217 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~g-t~~Y~AP 295 (427)
....... ........+| ++.|+||
T Consensus 174 ~~~~~~g-------------------------------------------------------~~~~~~~~~g~s~~y~a~ 198 (601)
T KOG0590|consen 174 AYRNKNG-------------------------------------------------------AERSLKDRCGSSPPYGAP 198 (601)
T ss_pred cccccCC-------------------------------------------------------cceeeecccCCCCCCCCc
Confidence 4432100 0012223455 7778888
Q ss_pred HHhhhccCCC-CCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCC
Q psy8260 296 EIMLNWMHYN-QTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSE 374 (427)
Q Consensus 296 Evl~~~~~~~-~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~ 374 (427)
|+..+..+.. ..|+|++|+++..+.++..++......... +... ...........|...+..+.+++.++|..+|.
T Consensus 199 E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~ 275 (601)
T KOG0590|consen 199 EHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR--YSSW-KSNKGRFTQLPWNSISDQAHDLLHKILKENPS 275 (601)
T ss_pred ccccchhhcCCCcccccccccccccccCCCCcccccccccc--ceee-cccccccccCccccCChhhhhcccccccCCch
Confidence 8776644433 459999999887776666554332222111 1000 00000111234567889999999999999999
Q ss_pred CCCCHHHHhcCCCCCC
Q psy8260 375 KRITAEQALAHPYLSQ 390 (427)
Q Consensus 375 ~R~ta~e~L~Hp~f~~ 390 (427)
.|.+.+++-.+||+..
T Consensus 276 ~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 276 NRLSIEELKLDNWLSS 291 (601)
T ss_pred hccccccccccccccc
Confidence 9999999999999987
No 426
>KOG1033|consensus
Probab=99.72 E-value=3.9e-18 Score=167.52 Aligned_cols=215 Identities=29% Similarity=0.367 Sum_probs=147.2
Q ss_pred HHHHHHHHHHhcCCCCCceeeeee------eecCccccCCceEEEEeccC-CCCHHHHHhhC----CCCHHHHHHHHHHH
Q psy8260 109 KRTYRELRMLKHMNHENVIGLLDV------FHSNTCLADFKNVYMVTHLM-GADLNNILRTQ----KLSDDHVQFLVYQI 177 (427)
Q Consensus 109 ~~~~~Ei~~l~~l~HpnIv~l~~~------~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~----~l~~~~~~~~~~qi 177 (427)
...++++-.+....|-|..-+.+. ....+......++|+.|.+| ..+|.++++.. ..+...+..++.|+
T Consensus 289 ~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~ 368 (516)
T KOG1033|consen 289 KYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQI 368 (516)
T ss_pred hhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhh
Confidence 445567776666666555544441 11112222233578899988 57899998643 35667888999999
Q ss_pred HHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCc
Q psy8260 178 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKP 257 (427)
Q Consensus 178 ~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~ 257 (427)
+.|++| ++.||||+||.||....+..+||.|||+........+. +
T Consensus 369 ~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~--------~------------------------ 413 (516)
T KOG1033|consen 369 APAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETV--------A------------------------ 413 (516)
T ss_pred ccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCcc--------c------------------------
Confidence 999999 99999999999999998899999999987543221110 0
Q ss_pred ccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCC-CHHHHhhcCcHHHH
Q psy8260 258 SNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTP-PAEFMAKISSDSAR 336 (427)
Q Consensus 258 ~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~-~~~~~~~~~~~~~~ 336 (427)
......+...||.+||+||-|.+..|..++||++||+|+++|... ..++...
T Consensus 414 --------------------~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~------- 466 (516)
T KOG1033|consen 414 --------------------PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI------- 466 (516)
T ss_pred --------------------chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-------
Confidence 001134566899999999999999999999999999999877541 1111110
Q ss_pred HHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q psy8260 337 KYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYL 388 (427)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f 388 (427)
+... ......+.+.+..-.|+..+|+.+||...|.+||++.+.--|+|.
T Consensus 467 ~t~~---d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 467 ATLT---DIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred Hhhh---hhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 0000 011111222233345788899999999999999988888888775
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=9.8e-17 Score=145.22 Aligned_cols=131 Identities=27% Similarity=0.374 Sum_probs=98.0
Q ss_pred ccCcccccEEEEeEEeCcCCcEEEEEEccCcC-CCH-----HHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPF-QSA-----VHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~-~~~-----~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.||+|+||.||.+. .+|..|++|...... ... ....++.+|+++++.+.|+++....-++... ..
T Consensus 1 ~ig~G~~~~vy~~~---~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~------~~ 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGD---FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP------DN 71 (199)
T ss_pred CCCCCceEEEEEee---cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC------CC
Confidence 37999999999876 367889999854321 111 1234567899999999888654333222211 23
Q ss_pred EEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 145 VYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 145 ~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
.+++|+++ |++|.+++..... .++.|++.+|.+||+.|++|||+||+||+++ ++.++++|||+++.
T Consensus 72 ~~lv~e~~~g~~l~~~~~~~~~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 72 KTIVMEYIEGKPLKDVIEEGND------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CEEEEEEECCccHHHHHhhcHH------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 57788877 7788887654321 6889999999999999999999999999999 88999999999865
No 428
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1.7e-16 Score=164.98 Aligned_cols=135 Identities=25% Similarity=0.313 Sum_probs=101.0
Q ss_pred eeccccCcccccEEEEeEEeCcCCcEEEEEEcc-CcCCC-----HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcccc
Q psy8260 67 DIGPTLSKESFDLIFSSALDSVSGVKVAIKKIA-RPFQS-----AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLA 140 (427)
Q Consensus 67 ~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~-~~~~~-----~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 140 (427)
...+.||+|+||.||++.. .+..+++|+.. +.... ....+++.+|+++++.++|+|++....+....
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~---~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~---- 408 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEY---LGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP---- 408 (535)
T ss_pred CccceeccCCcEEEEEEee---cCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC----
Confidence 4568899999999998654 23344444322 11111 12234577999999999999998766554322
Q ss_pred CCceEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 141 DFKNVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 141 ~~~~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
...+++||++ |++|.+++. ....++.|++.+|.|||+.|++||||||+|||+ .++.++|+|||+++..
T Consensus 409 --~~~~lv~E~~~g~~L~~~l~-------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 409 --EEKTIVMEYIGGKDLKDVLE-------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred --CCCEEEEEecCCCcHHHHHH-------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 2356788877 778988775 356788999999999999999999999999999 5789999999998753
No 429
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.69 E-value=1.8e-16 Score=141.98 Aligned_cols=137 Identities=26% Similarity=0.334 Sum_probs=92.6
Q ss_pred ccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHH----------------------HHHHHHHHhcCCCCC-
Q psy8260 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKR----------------------TYRELRMLKHMNHEN- 125 (427)
Q Consensus 69 ~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~----------------------~~~Ei~~l~~l~Hpn- 125 (427)
++.||+|+||.||.+. +. +|+.||||++............ ...|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~-~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 2 GGPIGTGKEADVYLAL-DG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CcccccccceeEEEEE-CC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 5679999999999764 33 7999999987643222111111 124555555554432
Q ss_pred -ceeeeeeeecCccccCCceEEEEeccCCC-CHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEE
Q psy8260 126 -VIGLLDVFHSNTCLADFKNVYMVTHLMGA-DLN-NILRTQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAV 201 (427)
Q Consensus 126 -Iv~l~~~~~~~~~~~~~~~~~lv~e~~g~-~L~-~~l~~~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl 201 (427)
+.+.++. ...+++++++++ .+. ..+...... ..+..++.|++.++.++|+ .||+||||||+||++
T Consensus 80 ~~~~~~~~----------~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili 148 (187)
T cd05119 80 PVPKPIDL----------NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILV 148 (187)
T ss_pred CCCceEec----------CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE
Confidence 3333322 124788888754 221 112111111 6678899999999999999 999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCC
Q psy8260 202 NEDCELKILDFGLARPTE 219 (427)
Q Consensus 202 ~~~~~~kl~DFGla~~~~ 219 (427)
+ ++.++|+|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8999999999986543
No 430
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.68 E-value=6e-16 Score=144.13 Aligned_cols=139 Identities=19% Similarity=0.303 Sum_probs=100.1
Q ss_pred cccC-cccccEEEEeEEeCcCCcEEEEEEccCcCC-----------CHHHHHHHHHHHHHHhcCCCCCc--eeeeeeeec
Q psy8260 70 PTLS-KESFDLIFSSALDSVSGVKVAIKKIARPFQ-----------SAVHAKRTYRELRMLKHMNHENV--IGLLDVFHS 135 (427)
Q Consensus 70 ~~lg-~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~-----------~~~~~~~~~~Ei~~l~~l~HpnI--v~l~~~~~~ 135 (427)
..+| .|+.|+|+.... .+..+|||...+... ......++.+|++++..++|++| +..+++...
T Consensus 37 ~~lg~~~g~gtv~~v~~---~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT---PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred ceeecCCCCccEEEEEe---CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 4565 677777775433 377899997753211 11233457789999999998875 666665432
Q ss_pred CccccCCceEEEEeccC-C-CCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCC
Q psy8260 136 NTCLADFKNVYMVTHLM-G-ADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 213 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~-g-~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFG 213 (427)
.... ....+++++++ | .+|.+++....+++.. +.|++.+|.+||++||+||||||+|||++.++.++|+|||
T Consensus 114 ~~~~--~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 114 RHGL--FYRADILIERIEGARDLVALLQEAPLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred ecCc--ceeeeEEEEecCCCCCHHHHHhcCCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence 2111 11234777766 4 5898888776666653 5689999999999999999999999999988899999999
Q ss_pred CCCC
Q psy8260 214 LARP 217 (427)
Q Consensus 214 la~~ 217 (427)
.++.
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8864
No 431
>KOG1166|consensus
Probab=99.62 E-value=2.4e-15 Score=160.25 Aligned_cols=196 Identities=18% Similarity=0.248 Sum_probs=134.2
Q ss_pred ccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCC---CCCceeeeeeeec
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMN---HENVIGLLDVFHS 135 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~ 135 (427)
.++....|.|...+|+|+||.||.++-+. |+.||+|+=+.+...+. +-=.+++.+|+ -+-|..+...+..
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~--~~~~alK~e~P~~~WEf-----YI~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSN--GKLVALKVEKPPNPWEF-----YICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCC--CcEEEEEeecCCCceee-----eehHHHHHhhchhhhcchHHHHHHHcc
Confidence 35666789999999999999999877654 99999997655433221 11112233333 0122222222111
Q ss_pred CccccCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-------CCC
Q psy8260 136 NTCLADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-------DCE 206 (427)
Q Consensus 136 ~~~~~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-------~~~ 206 (427)
. ..-+++++|. -|+|.+++.. +.+++..+..+..|++.-++.||..+|||+||||+|+||.. .-.
T Consensus 766 ~------~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 766 Q------NASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred C------CcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccc
Confidence 1 2235666666 5888888864 46899999999999999999999999999999999999842 346
Q ss_pred EEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccc
Q psy8260 207 LKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGY 286 (427)
Q Consensus 207 ~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~ 286 (427)
++|+|||.+-.+.--.. | ....+.
T Consensus 840 l~lIDfG~siDm~lfp~---~-----------------------------------------------------~~F~~~ 863 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPD---G-----------------------------------------------------TKFKAV 863 (974)
T ss_pred eEEEecccceeeeEcCC---C-----------------------------------------------------cEEeee
Confidence 89999997743210000 0 023344
Q ss_pred cccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCC
Q psy8260 287 VATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPP 323 (427)
Q Consensus 287 ~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~ 323 (427)
++|-.+--+|+..+.++....|.+-++.+++.|.++.
T Consensus 864 ~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 864 WHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred eccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 5566666778888888888999999998888776554
No 432
>KOG0195|consensus
Probab=99.57 E-value=8.7e-15 Score=132.67 Aligned_cols=246 Identities=17% Similarity=0.224 Sum_probs=160.8
Q ss_pred ccccCcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCcc
Q psy8260 59 SEICRGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTC 138 (427)
Q Consensus 59 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 138 (427)
..+.-+..++.-.|.+..-|..+++.+. |..+++|++..........+.+..|.-.|+-+.||||+.+++.....
T Consensus 185 ~gid~~~lnl~tkl~e~hsgelwrgrwq---gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-- 259 (448)
T KOG0195|consen 185 TGIDVSSLNLITKLAESHSGELWRGRWQ---GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-- 259 (448)
T ss_pred cCcchhhhhhhhhhccCCCccccccccc---CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC--
Confidence 3344444455556666666888877663 44566777654433444445677788889999999999999876443
Q ss_pred ccCCceEEEEeccC-CCCHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhcC-ce-eccCCCCCeEEcCCCCEEEeeC
Q psy8260 139 LADFKNVYMVTHLM-GADLNNILRTQK---LSDDHVQFLVYQILRGLKYIHSAG-II-HRDLKPSNIAVNEDCELKILDF 212 (427)
Q Consensus 139 ~~~~~~~~lv~e~~-g~~L~~~l~~~~---l~~~~~~~~~~qi~~aL~yLH~~~-ii-HrDLKp~NILl~~~~~~kl~DF 212 (427)
.++.++..|+ -++|+.++..+. .+..++.+++.++++|+.|||+.. +| ---|....++||++...+|+-
T Consensus 260 ----pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarism- 334 (448)
T KOG0195|consen 260 ----PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISM- 334 (448)
T ss_pred ----CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheec-
Confidence 4556666665 689999997653 677889999999999999999874 33 335788889999887766541
Q ss_pred CCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCccccccccccccc
Q psy8260 213 GLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWY 292 (427)
Q Consensus 213 Gla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y 292 (427)
+-+++.. ... |+.-.|.|
T Consensus 335 ad~kfsf-qe~-------------------------------------------------------------gr~y~paw 352 (448)
T KOG0195|consen 335 ADTKFSF-QEV-------------------------------------------------------------GRAYSPAW 352 (448)
T ss_pred ccceeee-ecc-------------------------------------------------------------ccccCccc
Confidence 1011100 011 22233444
Q ss_pred cchHHhhhccCC---CCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 293 RAPEIMLNWMHY---NQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 293 ~APEvl~~~~~~---~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
|+||.+...+-. ..+|+||+++++.+|.+...||.+-..-+...+..-. .+ -..+.+++++..-.|++-|+
T Consensus 353 mspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale--gl----rv~ippgis~hm~klm~icm 426 (448)
T KOG0195|consen 353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE--GL----RVHIPPGISRHMNKLMNICM 426 (448)
T ss_pred CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc--cc----cccCCCCccHHHHHHHHHHh
Confidence 444444433222 2469999999999999888777543222332222110 00 11345678999999999999
Q ss_pred CCCCCCCCCHHHH
Q psy8260 370 ELDSEKRITAEQA 382 (427)
Q Consensus 370 ~~dP~~R~ta~e~ 382 (427)
.-||.|||..+++
T Consensus 427 nedpgkrpkfdmi 439 (448)
T KOG0195|consen 427 NEDPGKRPKFDMI 439 (448)
T ss_pred cCCCCcCCCccee
Confidence 9999999987664
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.54 E-value=6.7e-14 Score=119.61 Aligned_cols=130 Identities=20% Similarity=0.234 Sum_probs=100.4
Q ss_pred ccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCC--CCceeeeeeeecCccccCCceEE
Q psy8260 69 GPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNH--ENVIGLLDVFHSNTCLADFKNVY 146 (427)
Q Consensus 69 ~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~H--pnIv~l~~~~~~~~~~~~~~~~~ 146 (427)
.+.+|.|.++.||....+ +..++||....... ...+.+|+.+++.++| .++.+++.++... ...+
T Consensus 3 ~~~i~~g~~~~v~~~~~~---~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~------~~~~ 69 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK---DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESD------GWSY 69 (155)
T ss_pred ceecccccccceEEEEec---CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC------CccE
Confidence 467899999999976543 36899998865432 3456789999999976 4888888776432 3467
Q ss_pred EEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhc---CceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 147 MVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 147 lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~---~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
++++++ |..+..+ +......++.+++.+|.++|.. +++|+|+||+||+++..+.++++|||.++.
T Consensus 70 ~v~e~~~g~~~~~~------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 70 LLMEWIEGETLDEV------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEEecCCeecccC------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 788777 4444432 4556677889999999999985 799999999999999989999999998864
No 434
>KOG0601|consensus
Probab=99.53 E-value=1.2e-14 Score=145.64 Aligned_cols=264 Identities=23% Similarity=0.234 Sum_probs=180.8
Q ss_pred ccCcceeeccccCc--ccccEEEEeEE-eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecC
Q psy8260 61 ICRGVIDIGPTLSK--ESFDLIFSSAL-DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSN 136 (427)
Q Consensus 61 ~~~~~~~~~~~lg~--g~fg~v~~~~~-~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~ 136 (427)
.....+.+...+|. |++|.+|.+.. ...++..+|+|+-+...........-.+|+...+.+ .|+|.++.+..+.+.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC
Confidence 33455667788999 99999996543 367889999998665555555555567888877777 599999977666543
Q ss_pred ccccCCceEEEEeccCCCCHHHHHhh--CCCCHHHHHHHHHHHHH----HHHHHHhcCceeccCCCCCeEEcCC-CCEEE
Q psy8260 137 TCLADFKNVYMVTHLMGADLNNILRT--QKLSDDHVQFLVYQILR----GLKYIHSAGIIHRDLKPSNIAVNED-CELKI 209 (427)
Q Consensus 137 ~~~~~~~~~~lv~e~~g~~L~~~l~~--~~l~~~~~~~~~~qi~~----aL~yLH~~~iiHrDLKp~NILl~~~-~~~kl 209 (427)
...|+.+|+++.+|..+... .-+++..+...+.+... ||.++|+.+++|-|+||.||++..+ ..+++
T Consensus 191 ------~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~ 264 (524)
T KOG0601|consen 191 ------GILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKL 264 (524)
T ss_pred ------CcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeec
Confidence 56799999999999887754 23788888888888888 9999999999999999999999988 89999
Q ss_pred eeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccc
Q psy8260 210 LDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVAT 289 (427)
Q Consensus 210 ~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt 289 (427)
.|||+...+....-..+ . .....-.|.
T Consensus 265 ~df~~v~~i~~~~~~~~----------------------------------------------------~-~~~~r~~~~ 291 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSV----------------------------------------------------F-KVSKRPEGD 291 (524)
T ss_pred CCcceeEEccCCccccc----------------------------------------------------e-eeeecCCCC
Confidence 99998765443210000 0 000111345
Q ss_pred ccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhc
Q psy8260 290 RWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLML 369 (427)
Q Consensus 290 ~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL 369 (427)
.-|++||++.+. +....|+.++|.++-.-+............. |. .+... ..-.++..+.+......+.+|+
T Consensus 292 ~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~----W~-~~r~~--~ip~e~~~~~s~~l~~~~~~~~ 363 (524)
T KOG0601|consen 292 CIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSS----WS-QLRQG--YIPLEFCEGGSSSLRSVTSQML 363 (524)
T ss_pred ceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCC----cc-ccccc--cCchhhhcCcchhhhhHHHHhc
Confidence 567777777653 4445688999877644333322111110000 00 00000 0111233445555666999999
Q ss_pred CCCCCCCCCHHHHhcCCCCCCC
Q psy8260 370 ELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 370 ~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
+.||..|++++.+++|+++...
T Consensus 364 d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 364 DEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred CcchhhhhHHHHHhccccccch
Confidence 9999999999999999999743
No 435
>KOG1023|consensus
Probab=99.45 E-value=4.1e-13 Score=134.42 Aligned_cols=207 Identities=21% Similarity=0.241 Sum_probs=134.4
Q ss_pred HhcCCCCCceeeeeeeecCccccCCceEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhcCc-eecc
Q psy8260 118 LKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILRGLKYIHSAGI-IHRD 193 (427)
Q Consensus 118 l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~aL~yLH~~~i-iHrD 193 (427)
|+.+.|.|+.++++..... ..++++-++| .|+|.+.+... .++..-...++++|+.||.|+|+..| .|+-
T Consensus 1 l~~l~h~n~~~f~g~~~~~------~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG------PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecC------CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeee
Confidence 4678999999999986543 4567777777 68999998764 45555566788999999999998876 9999
Q ss_pred CCCCCeEEcCCCCEEEeeCCCCCCCCC-----CcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchh
Q psy8260 194 LKPSNIAVNEDCELKILDFGLARPTEN-----EMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCEL 268 (427)
Q Consensus 194 LKp~NILl~~~~~~kl~DFGla~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 268 (427)
|+..|+++|....+||+|||+...... ......-..-|.|||++.+.......
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~---------------------- 132 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLE---------------------- 132 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhccccccccc----------------------
Confidence 999999999999999999999765432 01111122235556655431100000
Q ss_pred hhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHH---HHHHHhcCCCC
Q psy8260 269 KILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDS---ARKYINSLPLL 345 (427)
Q Consensus 269 ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~---~~~~~~~~~~~ 345 (427)
.......|++|+|+|++++.+...+|........ .-..+......
T Consensus 133 --------------------------------~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~ 180 (484)
T KOG1023|consen 133 --------------------------------SALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSN 180 (484)
T ss_pred --------------------------------ccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCC
Confidence 0022346999999999888666555543222211 11112220110
Q ss_pred CcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhc
Q psy8260 346 TKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALA 384 (427)
Q Consensus 346 ~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~ 384 (427)
...+.-.......++...++.+|-.-+|..||+++++-.
T Consensus 181 ~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 181 PFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred CcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 011100111134557899999999999999999999753
No 436
>KOG0606|consensus
Probab=99.38 E-value=2e-13 Score=143.68 Aligned_cols=286 Identities=20% Similarity=0.185 Sum_probs=180.3
Q ss_pred cceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC-HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCC
Q psy8260 64 GVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS-AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADF 142 (427)
Q Consensus 64 ~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~ 142 (427)
..+.+.+-+..+.|+.++- +....+|-..++|.......- ....+...++-.++-...||-++....-| ...
T Consensus 804 d~~~i~~p~qS~sp~ss~p-~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~------~~r 876 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFP-ASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF------PCR 876 (1205)
T ss_pred ccceecccccCCCCccccc-CCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC------CCC
Confidence 3456666888999988884 334445545555543321110 00111122222232233445555443221 123
Q ss_pred ceEEEEeccC-CCCHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 143 KNVYMVTHLM-GADLNNILRTQ-KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 143 ~~~~lv~e~~-g~~L~~~l~~~-~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
...++++++. +++|...++.. ..+.+-++.+...+..+++|||+..++|||+||.|+|+..++..++.|||+.....-
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccc
Confidence 5678888887 67888888764 477777888888999999999999999999999999999999999999995543211
Q ss_pred --Ccccc-----cccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccccccccccccc
Q psy8260 221 --EMTGY-----VATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYR 293 (427)
Q Consensus 221 --~~~~~-----~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~ 293 (427)
..+.. .|+..-.++-. ...++... ....-....||+.|.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~--------------------------------~~~~l~~~--~~~~~~~~~~t~~~l 1002 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSE--------------------------------RRPQLSAD--EARRKHAVVGTPDYL 1002 (1205)
T ss_pred ccCcCCcccccccCccccccccc--------------------------------cccccccc--hhhccccccCCCccc
Confidence 11111 11111110000 00000000 000123457899999
Q ss_pred chHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCC
Q psy8260 294 APEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDS 373 (427)
Q Consensus 294 APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP 373 (427)
|||.+.+...+...|+|+.|.++....++..+|.+...+...+...+.. ..|.......++++++++.++|..+|
T Consensus 1003 aPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~-----~~~p~g~~~~s~~aq~~~~~ll~~~~ 1077 (1205)
T KOG0606|consen 1003 APEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRD-----IPWPEGPEEGSYEAQDLINRLLTEEP 1077 (1205)
T ss_pred CCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCC-----CCCCCCccccChhhhhhhhhhhccCc
Confidence 9999999999999999999999877766666665443333333222221 22333334568999999999999999
Q ss_pred CCCCCHH---HHhcCCCCCCCCCCC
Q psy8260 374 EKRITAE---QALAHPYLSQYSDPN 395 (427)
Q Consensus 374 ~~R~ta~---e~L~Hp~f~~~~~~~ 395 (427)
.+|.++. +.-.||||+......
T Consensus 1078 ~qr~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1078 TQRLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred hhccCcccccccccCCccCCCCccc
Confidence 9999988 899999999765543
No 437
>KOG0660|consensus
Probab=99.36 E-value=6.8e-13 Score=125.10 Aligned_cols=120 Identities=35% Similarity=0.508 Sum_probs=86.9
Q ss_pred eeeccCCcccccccccchhhhhccCCCCCC-----ccccccccccccccchHHhhhcc-CCCCCCHHHHHHHHHHhCCCC
Q psy8260 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT-----ENEMTGYVATRWYRAPEIMLNWM-HYNQTDIHQLNLIMEMLGTPP 323 (427)
Q Consensus 250 ~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~-----~~~~~~~~gt~~Y~APEvl~~~~-~~~~~d~~slg~i~~~lg~~~ 323 (427)
-.++|++++|..+.++|.+||+|||+|+.. ...+++.+.|.||+|||++.... |....|+||.|||+.+|.++.
T Consensus 146 ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gk 225 (359)
T KOG0660|consen 146 VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGK 225 (359)
T ss_pred ccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCC
Confidence 467899999999999999999999999977 45678999999999999987665 445569999999998886666
Q ss_pred HHHHhhcCcHHHHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCC
Q psy8260 324 AEFMAKISSDSARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELD 372 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~d 372 (427)
..|.....-+.........+......+.. -.|+.|+..|+++=+..
T Consensus 226 plFpG~d~v~Ql~lI~~~lGtP~~e~l~~---i~s~~ar~yi~slp~~p 271 (359)
T KOG0660|consen 226 PLFPGKDYVHQLQLILELLGTPSEEDLQK---IRSEKARPYIKSLPQIP 271 (359)
T ss_pred CCCCCCchHHHHHHHHHhcCCCCHHHHHH---hccHHHHHHHHhCCCCC
Confidence 65654433233333333344333322222 24677888888876553
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.36 E-value=4.3e-12 Score=128.33 Aligned_cols=141 Identities=22% Similarity=0.328 Sum_probs=92.7
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHH--------------------------------H------HHH
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVH--------------------------------A------KRT 111 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~--------------------------------~------~~~ 111 (427)
+.+|.|++|.||++.+ .+|+.||||+.......... . -.+
T Consensus 123 ~plasaSigQVh~A~l--~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 123 KPLAAASIAQVHRARL--VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred cceeeeehhheEEEEe--cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 5799999999998765 47999999987543110000 0 012
Q ss_pred HHHHHHHhcC----CCCCceeeeeeeecCccccCCceEEEEeccC-CCCHHHHHhhC--CCCHHHHHHHHHHHHH-HHHH
Q psy8260 112 YRELRMLKHM----NHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRTQ--KLSDDHVQFLVYQILR-GLKY 183 (427)
Q Consensus 112 ~~Ei~~l~~l----~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~~--~l~~~~~~~~~~qi~~-aL~y 183 (427)
.+|++.+.++ +|.+-+..-.++.. .| ..-+++||++ |.+|.++.... ..+ ...++.+++. .+..
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~----~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWD-RT----SERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQ 272 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehh-hc----CCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHH
Confidence 3455544444 34344444444422 11 2347888888 66777665422 222 2345555555 4678
Q ss_pred HHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 184 IHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 184 LH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
+|..|++|+|+||.||+++.++.++++|||++.....
T Consensus 273 l~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 273 VLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 8999999999999999999999999999999876543
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.26 E-value=5.1e-11 Score=106.71 Aligned_cols=139 Identities=19% Similarity=0.254 Sum_probs=95.3
Q ss_pred cccCcccccEEEEeEEeCc-----CCcEEEEEEccCcC----------------------CCHHHH--HHHHHHHHHHhc
Q psy8260 70 PTLSKESFDLIFSSALDSV-----SGVKVAIKKIARPF----------------------QSAVHA--KRTYRELRMLKH 120 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~-----~g~~vAvK~i~~~~----------------------~~~~~~--~~~~~Ei~~l~~ 120 (427)
..+|.|.=+.||.+.-... .+..+|||+..... .+.... .-..+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 4577777788887653221 35789999754210 011111 113489999998
Q ss_pred CCC--CCceeeeeeeecCccccCCceEEEEeccCCCC-H-HHHHhhCCCCHHHHHHHHHHHHHHHHHH-HhcCceeccCC
Q psy8260 121 MNH--ENVIGLLDVFHSNTCLADFKNVYMVTHLMGAD-L-NNILRTQKLSDDHVQFLVYQILRGLKYI-HSAGIIHRDLK 195 (427)
Q Consensus 121 l~H--pnIv~l~~~~~~~~~~~~~~~~~lv~e~~g~~-L-~~~l~~~~l~~~~~~~~~~qi~~aL~yL-H~~~iiHrDLK 195 (427)
+.. -++.+.+++. .-+++||+.+++ + ...++...+++.....+..|++.+|..| |+.||||+||+
T Consensus 83 l~~~Gv~vP~pi~~~----------~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVLK----------KHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEec----------CCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 853 4566666541 237889988653 2 2234444566667778889999999999 89999999999
Q ss_pred CCCeEEcCCCCEEEeeCCCCCCCC
Q psy8260 196 PSNIAVNEDCELKILDFGLARPTE 219 (427)
Q Consensus 196 p~NILl~~~~~~kl~DFGla~~~~ 219 (427)
+.|||++ ++.+.|+|||.+....
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeCC
Confidence 9999997 4689999999886543
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.26 E-value=5.9e-12 Score=129.08 Aligned_cols=142 Identities=24% Similarity=0.404 Sum_probs=90.2
Q ss_pred ceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC---------------------------H-----HHHHH--
Q psy8260 65 VIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS---------------------------A-----VHAKR-- 110 (427)
Q Consensus 65 ~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~---------------------------~-----~~~~~-- 110 (427)
.|+. ..+|.|++|.|+.+.+ ..+|+.||||++.+.... . ...+.
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l-~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARL-KDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEE-CCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 3555 6899999999997654 446999999998643100 0 00111
Q ss_pred ----HHHHHHHHhcC----CCCCceeeeeeeecCccccCCceEEEEeccC-CCCHHHH--HhhCC-----CCHHHHHHHH
Q psy8260 111 ----TYRELRMLKHM----NHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNI--LRTQK-----LSDDHVQFLV 174 (427)
Q Consensus 111 ----~~~Ei~~l~~l----~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~--l~~~~-----l~~~~~~~~~ 174 (427)
+.+|+..+.++ .+.+.+.+-.+|.. .| ..-+++||++ |+.+.++ +...+ +.+..+..++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d-~s----t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~ 273 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWD-YC----SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFF 273 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecc-cC----CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHH
Confidence 22344333333 24444444444432 12 2357888888 6677664 33333 4444455555
Q ss_pred HHHHHHHHHHHhcCceeccCCCCCeEEcCCC----CEEEeeCCCCCCCCC
Q psy8260 175 YQILRGLKYIHSAGIIHRDLKPSNIAVNEDC----ELKILDFGLARPTEN 220 (427)
Q Consensus 175 ~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~----~~kl~DFGla~~~~~ 220 (427)
.|++ ..|++|+|+||.||+++.++ .++++|||++.....
T Consensus 274 ~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 274 TQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 6654 58999999999999999887 999999999876543
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=3.1e-11 Score=106.02 Aligned_cols=126 Identities=18% Similarity=0.164 Sum_probs=86.5
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCce-eeeeeeecCccccCCceEEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVI-GLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv-~l~~~~~~~~~~~~~~~~~lv 148 (427)
+.++.|.++.||.... .|..|++|....... ......+|+.+++.+.+.+++ +++.+... ..+++
T Consensus 4 ~~l~~G~~~~vy~~~~---~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--------~~~lv 69 (170)
T cd05151 4 SPLKGGMTNKNYRVEV---ANKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDPE--------TGVLI 69 (170)
T ss_pred eecCCcccCceEEEEE---CCeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeCC--------CCeEE
Confidence 3567888899996543 377899998654321 112346788888888665544 44443211 13577
Q ss_pred eccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCc-----eeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 149 THLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGI-----IHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 149 ~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~i-----iHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
|+++ |..+... .......+.+++.+|..||+.++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 70 ~e~i~G~~l~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 70 TEFIEGSELLTE-------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred EEecCCCccccc-------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 7777 4454432 11123456799999999999885 9999999999999 67899999998763
No 442
>KOG0601|consensus
Probab=99.14 E-value=2.9e-11 Score=121.47 Aligned_cols=149 Identities=22% Similarity=0.258 Sum_probs=114.3
Q ss_pred CcceeeccccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcC-CCCCceeeeeeeecCccccC
Q psy8260 63 RGVIDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHM-NHENVIGLLDVFHSNTCLAD 141 (427)
Q Consensus 63 ~~~~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~ 141 (427)
.++|.....||.+.|+.|+....+..++..+|+|.+.+..........-+.|+.+...+ .|.+++.++..|...
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~----- 338 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL----- 338 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc-----
Confidence 46678888999999999997776667889999998876544444444445677766665 588888877655432
Q ss_pred CceEEEEeccC-CCCHHHH-HhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCC-CCEEEeeCCCCCC
Q psy8260 142 FKNVYMVTHLM-GADLNNI-LRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED-CELKILDFGLARP 217 (427)
Q Consensus 142 ~~~~~lv~e~~-g~~L~~~-l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~-~~~kl~DFGla~~ 217 (427)
+..|+-.|++ ++++..- .-...+.+...+....|++.|+.++|++.++|+|+||+||++..+ +..++.|||....
T Consensus 339 -r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 339 -RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred -ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence 4567888888 5544322 223568888899999999999999999999999999999999876 7889999997753
No 443
>KOG0593|consensus
Probab=99.11 E-value=2.3e-11 Score=112.29 Aligned_cols=78 Identities=35% Similarity=0.561 Sum_probs=67.5
Q ss_pred cceeeccCCcccccccccchhhhhccCCCCCC---ccccccccccccccchHHhhh-ccCCCCCCHHHHHHHHHHhCCCC
Q psy8260 248 VPFYFQDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGYVATRWYRAPEIMLN-WMHYNQTDIHQLNLIMEMLGTPP 323 (427)
Q Consensus 248 ~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~---~~~~~~~~gt~~Y~APEvl~~-~~~~~~~d~~slg~i~~~lg~~~ 323 (427)
..+.++|+++.|+++...+.+|++|||+|+.. ....+..++|.||+|||.+.+ ..|+..+|+|++||++.+|.++.
T Consensus 120 ~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~ 199 (396)
T KOG0593|consen 120 NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGE 199 (396)
T ss_pred cCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCC
Confidence 35889999999999999999999999999854 346778999999999999988 56777889999999998887665
Q ss_pred HH
Q psy8260 324 AE 325 (427)
Q Consensus 324 ~~ 325 (427)
+-
T Consensus 200 pL 201 (396)
T KOG0593|consen 200 PL 201 (396)
T ss_pred cC
Confidence 43
No 444
>KOG0661|consensus
Probab=99.03 E-value=1.7e-10 Score=112.46 Aligned_cols=95 Identities=37% Similarity=0.543 Sum_probs=70.9
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCcc--ccccccccccccchHHhhhcc-CCCCCCHHHHHHHHHHhCCCCHH
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTEN--EMTGYVATRWYRAPEIMLNWM-HYNQTDIHQLNLIMEMLGTPPAE 325 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~--~~~~~~gt~~Y~APEvl~~~~-~~~~~d~~slg~i~~~lg~~~~~ 325 (427)
.|+++|+++.|+++.....+||+|||+|+.... .++..+.|.||+||||++... |..+.|+|++|||++++-+..+-
T Consensus 130 GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPL 209 (538)
T KOG0661|consen 130 GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPL 209 (538)
T ss_pred CcccccCChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhccc
Confidence 588999999999999888999999999997543 567899999999999987655 44567999999999887544433
Q ss_pred HHhhcCcHHHHHHHhcCC
Q psy8260 326 FMAKISSDSARKYINSLP 343 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~ 343 (427)
|.....-+...+....+.
T Consensus 210 FPG~sE~Dqi~KIc~VLG 227 (538)
T KOG0661|consen 210 FPGASEIDQIYKICEVLG 227 (538)
T ss_pred CCCCcHHHHHHHHHHHhC
Confidence 433322233444444333
No 445
>KOG0659|consensus
Probab=99.02 E-value=1.5e-10 Score=105.14 Aligned_cols=70 Identities=40% Similarity=0.592 Sum_probs=57.9
Q ss_pred eeccCCcccccccccchhhhhccCCCCCC---ccccccccccccccchHHhhhc-cCCCCCCHHHHHHHHHHhC
Q psy8260 251 YFQDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGYVATRWYRAPEIMLNW-MHYNQTDIHQLNLIMEMLG 320 (427)
Q Consensus 251 ~~~d~~~~~~~~~~~~~~ki~d~g~~~~~---~~~~~~~~gt~~Y~APEvl~~~-~~~~~~d~~slg~i~~~lg 320 (427)
-++|+++.|.++..++.+|++|||+++.. .......+.|.||+|||.+.+. .|..++|+||.|||+.+|.
T Consensus 123 lHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELl 196 (318)
T KOG0659|consen 123 LHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELL 196 (318)
T ss_pred hcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHH
Confidence 45699999999999999999999999853 3334445789999999998765 4667889999999997663
No 446
>KOG0667|consensus
Probab=99.02 E-value=1e-10 Score=118.20 Aligned_cols=80 Identities=30% Similarity=0.493 Sum_probs=69.9
Q ss_pred CcceeeccCCcccccccc--cchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCH
Q psy8260 247 GVPFYFQDLKPSNIAVNE--DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPA 324 (427)
Q Consensus 247 ~~~~~~~d~~~~~~~~~~--~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~ 324 (427)
....+++|+++.|+++.. .+.+|++|||.++.........+.+..|+|||||++.+|..+.||||||||+.+|-++-+
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~P 386 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEP 386 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcc
Confidence 345789999999999765 567899999999988777779999999999999999999999999999999998866644
Q ss_pred HH
Q psy8260 325 EF 326 (427)
Q Consensus 325 ~~ 326 (427)
-|
T Consensus 387 Lf 388 (586)
T KOG0667|consen 387 LF 388 (586)
T ss_pred cc
Confidence 34
No 447
>KOG0594|consensus
Probab=99.00 E-value=1.8e-10 Score=108.93 Aligned_cols=93 Identities=33% Similarity=0.450 Sum_probs=71.3
Q ss_pred eeeccCCcccccccccchhhhhccCCCCCC---ccccccccccccccchHHhhhc-cCCCCCCHHHHHHHHHHhCCCCHH
Q psy8260 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT---ENEMTGYVATRWYRAPEIMLNW-MHYNQTDIHQLNLIMEMLGTPPAE 325 (427)
Q Consensus 250 ~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~---~~~~~~~~gt~~Y~APEvl~~~-~~~~~~d~~slg~i~~~lg~~~~~ 325 (427)
..++|+++-|++++..+.+|++|||+++.. ....+..++|.||+|||++.+. .|....|+||+|||+.+|-+...-
T Consensus 141 IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 141 ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred eecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 467899999999999999999999999853 2346678999999999999887 566678999999999888666555
Q ss_pred HHhhcCcHHHHHHHhcC
Q psy8260 326 FMAKISSDSARKYINSL 342 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~~~ 342 (427)
|......+......+..
T Consensus 221 FpG~se~~ql~~If~~l 237 (323)
T KOG0594|consen 221 FPGDSEIDQLFRIFRLL 237 (323)
T ss_pred CCCCcHHHHHHHHHHHc
Confidence 54433333333444333
No 448
>KOG0663|consensus
Probab=99.00 E-value=1.8e-10 Score=107.71 Aligned_cols=74 Identities=38% Similarity=0.522 Sum_probs=62.7
Q ss_pred eeeccCCcccccccccchhhhhccCCCCCCccc---cccccccccccchHHhhhcc-CCCCCCHHHHHHHHHHhCCCC
Q psy8260 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENE---MTGYVATRWYRAPEIMLNWM-HYNQTDIHQLNLIMEMLGTPP 323 (427)
Q Consensus 250 ~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~---~~~~~gt~~Y~APEvl~~~~-~~~~~d~~slg~i~~~lg~~~ 323 (427)
+.++|++++|.++...|.+||+|||+|+..... ++..+.|.||+|||.+++.. |....|+||+|||+.+|....
T Consensus 198 ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~k 275 (419)
T KOG0663|consen 198 ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQK 275 (419)
T ss_pred eEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcC
Confidence 567899999999999999999999999975444 67788999999999998765 556679999999997764443
No 449
>KOG1266|consensus
Probab=98.98 E-value=6e-10 Score=104.17 Aligned_cols=93 Identities=25% Similarity=0.368 Sum_probs=73.1
Q ss_pred HHhcCCCCCceeeeeeeecCccccCCceEEEEeccC-CCCHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhc--C
Q psy8260 117 MLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRT-----QKLSDDHVQFLVYQILRGLKYIHSA--G 188 (427)
Q Consensus 117 ~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~yLH~~--~ 188 (427)
-|-++.|-|||+++.++.+.. .++...+.+..+|+ .+.+.++|++ ..+.....++|+.||+.||.|||+. -
T Consensus 120 nllqlvHsnlvkfH~yw~d~K-~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKK-YEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccc-cccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 345668999999999886543 23344455555555 7899988864 3478888899999999999999987 4
Q ss_pred ceeccCCCCCeEEcCCCCEEEe
Q psy8260 189 IIHRDLKPSNIAVNEDCELKIL 210 (427)
Q Consensus 189 iiHrDLKp~NILl~~~~~~kl~ 210 (427)
|+|..+...-|++..+|-+|+.
T Consensus 199 iihgnlTc~tifiq~ngLIkig 220 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIG 220 (458)
T ss_pred cccCCcchhheeecCCceEEec
Confidence 9999999999999999888864
No 450
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.94 E-value=1.6e-08 Score=88.22 Aligned_cols=129 Identities=26% Similarity=0.392 Sum_probs=85.4
Q ss_pred cCcccccEEEEeEEeCcCCcEEEEEE-ccCcCCCH-----HHHHHHHHHHHHHhcCCC--CCceeeeeeeecCccccCCc
Q psy8260 72 LSKESFDLIFSSALDSVSGVKVAIKK-IARPFQSA-----VHAKRTYRELRMLKHMNH--ENVIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 72 lg~g~fg~v~~~~~~~~~g~~vAvK~-i~~~~~~~-----~~~~~~~~Ei~~l~~l~H--pnIv~l~~~~~~~~~~~~~~ 143 (427)
+.+|+=..++..-+ -|..+.+|. +.+....+ ....+..+|++++.++.- -|+..++++.. .
T Consensus 4 i~~GAEa~i~~~~~---~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~--------~ 72 (204)
T COG3642 4 IKQGAEAIIYLTDF---LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP--------D 72 (204)
T ss_pred hhCCcceeEEeeec---cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC--------C
Confidence 45566566664322 244566663 33332222 123557789999988754 34555565532 3
Q ss_pred eEEEEeccCCC-CHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 144 NVYMVTHLMGA-DLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 144 ~~~lv~e~~g~-~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
...++|++.+| .|.+.+... . ..+++.|-.-+.-||..||+|+||.++||++..++ +.++||||+...
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~--~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA--R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc--c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 45688888855 566677654 1 34566777777889999999999999999998654 999999998743
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.93 E-value=1.8e-08 Score=95.11 Aligned_cols=127 Identities=16% Similarity=0.206 Sum_probs=84.2
Q ss_pred CCcEEEEEEccCcCCCH---------HHHHHHHHHHHHHhcCCCCCc--eeeeeeeecCccccCCceEEEEeccCCC--C
Q psy8260 89 SGVKVAIKKIARPFQSA---------VHAKRTYRELRMLKHMNHENV--IGLLDVFHSNTCLADFKNVYMVTHLMGA--D 155 (427)
Q Consensus 89 ~g~~vAvK~i~~~~~~~---------~~~~~~~~Ei~~l~~l~HpnI--v~l~~~~~~~~~~~~~~~~~lv~e~~g~--~ 155 (427)
.|+.|.||......... .-...+.+|.+.+..|..-+| ...+.+...... ......++++++.++ +
T Consensus 44 ~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~-~~~~~s~LVte~l~~~~s 122 (268)
T PRK15123 44 AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSN-PATRTSFIITEDLAPTIS 122 (268)
T ss_pred CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCC-CccceeEEEEeeCCCCcc
Confidence 46678888653321100 001135678887777643332 333444322111 111345678887754 6
Q ss_pred HHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcC-------CCCEEEeeCCCCC
Q psy8260 156 LNNILRT---QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-------DCELKILDFGLAR 216 (427)
Q Consensus 156 L~~~l~~---~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~-------~~~~kl~DFGla~ 216 (427)
|.+++.. ...+......++.+++..+.-||+.||+|+||+++|||++. +..+.++||+.++
T Consensus 123 L~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 123 LEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 8888752 34566777889999999999999999999999999999975 4689999999875
No 452
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.91 E-value=1e-08 Score=93.88 Aligned_cols=142 Identities=20% Similarity=0.279 Sum_probs=94.2
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCC--CCceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNH--ENVIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~H--pnIv~l~~~~~~~~~~~~~~~~~l 147 (427)
..++.|..+.+|+.... .|..+++|........ .......+|+++++.+.+ .++.+++.+..... .....++
T Consensus 4 ~~l~~G~~n~~~~v~~~--~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~---~~~~~~~ 77 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG--GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS---VLGTPFY 77 (223)
T ss_pred eecCCCccceEEEEEec--CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC---ccCCceE
Confidence 35788999999976542 3688999987543221 123456789999998866 34566666543221 0123467
Q ss_pred EeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHh----------------------------------------
Q psy8260 148 VTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHS---------------------------------------- 186 (427)
Q Consensus 148 v~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~---------------------------------------- 186 (427)
+++++ |.++...+....+++.....++.+++.+|..||+
T Consensus 78 v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 78 VMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 78777 4455443321345666666667777777777763
Q ss_pred ----------------cCceeccCCCCCeEEcC--CCCEEEeeCCCCCC
Q psy8260 187 ----------------AGIIHRDLKPSNIAVNE--DCELKILDFGLARP 217 (427)
Q Consensus 187 ----------------~~iiHrDLKp~NILl~~--~~~~kl~DFGla~~ 217 (427)
..++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 24699999999999998 66789999998763
No 453
>KOG0600|consensus
Probab=98.90 E-value=6.5e-10 Score=109.14 Aligned_cols=74 Identities=35% Similarity=0.481 Sum_probs=62.4
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCC----ccccccccccccccchHHhhhcc-CCCCCCHHHHHHHHHHhCCC
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPT----ENEMTGYVATRWYRAPEIMLNWM-HYNQTDIHQLNLIMEMLGTP 322 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~----~~~~~~~~gt~~Y~APEvl~~~~-~~~~~d~~slg~i~~~lg~~ 322 (427)
..-++|++++|++++.++.+||+|||+|+.. ...++.++-|.||+|||.|++.. |..++|+||.|||+.+|-.+
T Consensus 238 gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~g 316 (560)
T KOG0600|consen 238 GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLG 316 (560)
T ss_pred CeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcC
Confidence 3567899999999999999999999999832 23578899999999999998865 55677999999999777443
No 454
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.89 E-value=9.3e-09 Score=91.77 Aligned_cols=99 Identities=29% Similarity=0.386 Sum_probs=65.8
Q ss_pred HHHHHHHHHHhcCCCC--CceeeeeeeecCccccCCceEEEEeccCC--CCHHHHHhhCCCCHHHHHHHHHHHHHHHHH-
Q psy8260 109 KRTYRELRMLKHMNHE--NVIGLLDVFHSNTCLADFKNVYMVTHLMG--ADLNNILRTQKLSDDHVQFLVYQILRGLKY- 183 (427)
Q Consensus 109 ~~~~~Ei~~l~~l~Hp--nIv~l~~~~~~~~~~~~~~~~~lv~e~~g--~~L~~~l~~~~l~~~~~~~~~~qi~~aL~y- 183 (427)
....+|.+.|.++..- ++.+.+++- .-+++||+.+ |.....+....++......++.+++..+..
T Consensus 53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~~----------~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~ 122 (188)
T PF01163_consen 53 EWAKKEFRNLKRLYEAGVPVPKPYDYN----------RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKM 122 (188)
T ss_dssp HHHHHHHHHHHHCCCTT-SS--EEEEE----------TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCccCCcEEEEe----------CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHH
Confidence 3456899999999765 566666552 1268888886 533333333333345566777888886665
Q ss_pred HHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCC
Q psy8260 184 IHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPT 218 (427)
Q Consensus 184 LH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~ 218 (427)
+|+.||+|+||.+.|||++++ .+.|+|||.+...
T Consensus 123 ~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 123 LHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp HHCTTEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred HHhcCceecCCChhhEEeecc-eEEEEecCcceec
Confidence 579999999999999999977 9999999987543
No 455
>PTZ00284 protein kinase; Provisional
Probab=98.77 E-value=5.5e-09 Score=107.23 Aligned_cols=79 Identities=29% Similarity=0.390 Sum_probs=66.7
Q ss_pred ceeeccCCcccccccccc----------------hhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHH
Q psy8260 249 PFYFQDLKPSNIAVNEDC----------------ELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQL 312 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~----------------~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~sl 312 (427)
...++|+++.|+++..++ .+|++|||.+..........+||+.|+|||++.+..+..++|+||+
T Consensus 252 gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSl 331 (467)
T PTZ00284 252 HLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSM 331 (467)
T ss_pred CeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHH
Confidence 577889999999997654 5899999988765555567889999999999999888888999999
Q ss_pred HHHHHHhCCCCHHHH
Q psy8260 313 NLIMEMLGTPPAEFM 327 (427)
Q Consensus 313 g~i~~~lg~~~~~~~ 327 (427)
|+++++|.++..+|.
T Consensus 332 Gvil~elltG~~pf~ 346 (467)
T PTZ00284 332 GCIIYELYTGKLLYD 346 (467)
T ss_pred HHHHHHHHhCCCCCC
Confidence 999998877666664
No 456
>KOG1243|consensus
Probab=98.75 E-value=7.7e-08 Score=98.17 Aligned_cols=121 Identities=23% Similarity=0.394 Sum_probs=95.1
Q ss_pred eCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEeccCCCCHHHHHhhCCC
Q psy8260 86 DSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNNILRTQKL 165 (427)
Q Consensus 86 ~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~l~~~~l 165 (427)
.+.++.+|.|........ .......+-++-|+.++||||+++++.+... ...|+++|-+. -|..+++. +
T Consensus 33 ~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~------~~~ylvTErV~-Pl~~~lk~--l 101 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEE------GTLYLVTERVR-PLETVLKE--L 101 (690)
T ss_pred eeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhccc------CceEEEeeccc-cHHHHHHH--h
Confidence 346788899988765433 4445567888999999999999999887654 46799999764 24444433 2
Q ss_pred CHHHHHHHHHHHHHHHHHHH-hcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 166 SDDHVQFLVYQILRGLKYIH-SAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 166 ~~~~~~~~~~qi~~aL~yLH-~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
....+..-+.||+.||.||| +.+++|.+|.-..|+++..|+.||++|-++..
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~ 154 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSK 154 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEec
Confidence 36667777899999999997 67899999999999999999999999987653
No 457
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.74 E-value=1.6e-07 Score=85.59 Aligned_cols=128 Identities=24% Similarity=0.365 Sum_probs=84.8
Q ss_pred cCCcEEEEEEccCcCCCH-----HHHHHHHHHHHHHhcCCCC--CceeeeeeeecCccccCCceEEEEeccC-C-CCHHH
Q psy8260 88 VSGVKVAIKKIARPFQSA-----VHAKRTYRELRMLKHMNHE--NVIGLLDVFHSNTCLADFKNVYMVTHLM-G-ADLNN 158 (427)
Q Consensus 88 ~~g~~vAvK~i~~~~~~~-----~~~~~~~~Ei~~l~~l~Hp--nIv~l~~~~~~~~~~~~~~~~~lv~e~~-g-~~L~~ 158 (427)
..++.+-+|......... ....+..+|...+..|..- .+.+.+++........ ...+++++.. + .+|.+
T Consensus 30 ~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~--~~s~lite~l~~~~~L~~ 107 (206)
T PF06293_consen 30 LVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGG--YRSYLITEALPGAQDLRD 107 (206)
T ss_pred ccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCc--eeEEEEEEeCCCcccHHH
Confidence 345566666543221111 1233466777777666432 2344444443321111 3346666665 4 37888
Q ss_pred HHhh-CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC---CEEEeeCCCCCC
Q psy8260 159 ILRT-QKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC---ELKILDFGLARP 217 (427)
Q Consensus 159 ~l~~-~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~---~~kl~DFGla~~ 217 (427)
++.. ...+......++.+++..+.-||++||+|+|+++.|||++.++ .+.++||+.++.
T Consensus 108 ~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 108 LLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 8865 3366777888999999999999999999999999999999876 899999997764
No 458
>KOG3087|consensus
Probab=98.73 E-value=1.5e-07 Score=81.93 Aligned_cols=137 Identities=20% Similarity=0.284 Sum_probs=87.8
Q ss_pred ccCcccccEEEEeEEeCcCCcEEEEEEcc-CcCCC-----HHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCce
Q psy8260 71 TLSKESFDLIFSSALDSVSGVKVAIKKIA-RPFQS-----AVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKN 144 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~~~g~~vAvK~i~-~~~~~-----~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 144 (427)
.+-+|+=+.|+.+. ..|+.+.||.-. +.... .....+..+|++.|.++.--.|..-.=+|.+. ..
T Consensus 14 likQGAEArv~~~~---~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~------~~ 84 (229)
T KOG3087|consen 14 LIKQGAEARVPRGS---FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT------YG 84 (229)
T ss_pred eeeccceeeEeeec---cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec------CC
Confidence 34455555565433 467888888532 21111 22345678899999887543332211112111 22
Q ss_pred EEEEeccCCC--CHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCC---CEEEeeCCCCC
Q psy8260 145 VYMVTHLMGA--DLNNILRTQ---KLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC---ELKILDFGLAR 216 (427)
Q Consensus 145 ~~lv~e~~g~--~L~~~l~~~---~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~---~~kl~DFGla~ 216 (427)
-.++||+..| ++.+++... .........++++|-+.+.-||.++|||+||..+||++..++ .+.++|||++.
T Consensus 85 ~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 85 GQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred CeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchh
Confidence 3577888765 677766532 222333367889999999999999999999999999997654 35899999975
No 459
>KOG0666|consensus
Probab=98.72 E-value=3.4e-09 Score=98.45 Aligned_cols=76 Identities=42% Similarity=0.636 Sum_probs=61.9
Q ss_pred eeccCCccccccccc----chhhhhccCCCCCCccc------cccccccccccchHHhhhccCCCCC-CHHHHHHHHHHh
Q psy8260 251 YFQDLKPSNIAVNED----CELKILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYNQT-DIHQLNLIMEML 319 (427)
Q Consensus 251 ~~~d~~~~~~~~~~~----~~~ki~d~g~~~~~~~~------~~~~~gt~~Y~APEvl~~~~~~~~~-d~~slg~i~~~l 319 (427)
.++|++++|+++..+ |.+||+|+|+++...+. ....+.|.||+|||.+++...+++. |+|++|||+.+|
T Consensus 154 lHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaEl 233 (438)
T KOG0666|consen 154 LHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAEL 233 (438)
T ss_pred eeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHH
Confidence 456999999998887 89999999999864433 2356779999999999998877765 999999999887
Q ss_pred CCCCHHH
Q psy8260 320 GTPPAEF 326 (427)
Q Consensus 320 g~~~~~~ 326 (427)
.+..+-|
T Consensus 234 Ltl~PlF 240 (438)
T KOG0666|consen 234 LTLEPLF 240 (438)
T ss_pred HccCccc
Confidence 6655444
No 460
>KOG0665|consensus
Probab=98.72 E-value=5.7e-09 Score=97.31 Aligned_cols=79 Identities=49% Similarity=0.696 Sum_probs=67.4
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCc--cccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHH
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTE--NEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEF 326 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~--~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~ 326 (427)
...++|+++.|+++..+|.+|++|||.++... .+.+..+.|..|+||||+.+..+...+||||+|||+-.|..+..-|
T Consensus 138 ~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf 217 (369)
T KOG0665|consen 138 GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLF 217 (369)
T ss_pred ceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEe
Confidence 35677999999999999999999999998543 3567899999999999999999888889999999998886665444
Q ss_pred H
Q psy8260 327 M 327 (427)
Q Consensus 327 ~ 327 (427)
.
T Consensus 218 ~ 218 (369)
T KOG0665|consen 218 P 218 (369)
T ss_pred c
Confidence 3
No 461
>KOG0664|consensus
Probab=98.70 E-value=4.1e-09 Score=96.21 Aligned_cols=73 Identities=41% Similarity=0.662 Sum_probs=59.5
Q ss_pred eeeccCCcccccccccchhhhhccCCCCCCc----cccccccccccccchHHhhhccCCC-CCCHHHHHHHHHHhCCC
Q psy8260 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTE----NEMTGYVATRWYRAPEIMLNWMHYN-QTDIHQLNLIMEMLGTP 322 (427)
Q Consensus 250 ~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~----~~~~~~~gt~~Y~APEvl~~~~~~~-~~d~~slg~i~~~lg~~ 322 (427)
.-++|++++|.+++.+|.+||+|||+++..+ ..++-.+.|.+|+|||++.+...+. ..|+||.|+|+.+|...
T Consensus 177 ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgR 254 (449)
T KOG0664|consen 177 ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQR 254 (449)
T ss_pred hhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhh
Confidence 3456999999999999999999999998643 2345567899999999999877655 55999999999666433
No 462
>PRK09902 hypothetical protein; Provisional
Probab=98.68 E-value=3.1e-07 Score=82.69 Aligned_cols=142 Identities=16% Similarity=0.203 Sum_probs=95.8
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC----HHHHHHHHHHHHHHhcCCCCC--ceeeeeeeecCccccCCc
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS----AVHAKRTYRELRMLKHMNHEN--VIGLLDVFHSNTCLADFK 143 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~----~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~~~~~~~~~~~~~~ 143 (427)
..-|+||-++|+.-.+ .|..+=+|+-...... +.-...+.+|...|..|..-+ +.+.. ++. ........
T Consensus 24 pN~~rgG~SgV~r~~~---~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~-~~k~~~~~ 98 (216)
T PRK09902 24 PNYRRNGMSGVQCVER---NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGE-AVKIEGEW 98 (216)
T ss_pred CCcCCCCcceEEEEEe---CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eee-eeccCCce
Confidence 3456788888986443 3446888876421110 112345778998888875433 33333 221 11111123
Q ss_pred eEEEEeccCC--CCHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCC--EEEeeCCCCC
Q psy8260 144 NVYMVTHLMG--ADLNNILRTQK---LSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE--LKILDFGLAR 216 (427)
Q Consensus 144 ~~~lv~e~~g--~~L~~~l~~~~---l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~--~kl~DFGla~ 216 (427)
..++|++-.+ .+|.+++.... .+......+..+++..+.-||+.|+.|+|+-+.|||++.++. ++++||--++
T Consensus 99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 4567777555 58988886644 466666789999999999999999999999999999986666 9999998665
No 463
>KOG3741|consensus
Probab=98.63 E-value=6.7e-07 Score=88.91 Aligned_cols=135 Identities=19% Similarity=0.289 Sum_probs=98.5
Q ss_pred ccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEeccC--CC
Q psy8260 77 FDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM--GA 154 (427)
Q Consensus 77 fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~--g~ 154 (427)
|...-+++....+|..|.+|++..... ....+...-++..+++.|+|||++.++|.+.. + ....+++|..|. .+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~--~~~nk~t~lve~wkkl~h~NvV~frevf~t~t-F-~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRD--QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT-F-GDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccc--cCcccchHHHHHHHHhccCceeehhhhhhhhc-c-CcceEEEEEecCCCCc
Confidence 544444678888999999999943211 11122334567789999999999999998432 2 224566666665 34
Q ss_pred CHHHHH-h---------------hCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 155 DLNNIL-R---------------TQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 155 ~L~~~l-~---------------~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
+|.++. . ..+.+|..+..|+.|+..||.++|+.|+.-+-|.|.+||++.+.+++|+--|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccce
Confidence 666543 1 124678899999999999999999999999999999999998888888766654
No 464
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.62 E-value=1.4e-08 Score=99.76 Aligned_cols=78 Identities=62% Similarity=0.936 Sum_probs=66.1
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh-ccCCCCCCHHHHHHHHHHhCCCCHHH
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN-WMHYNQTDIHQLNLIMEMLGTPPAEF 326 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~-~~~~~~~d~~slg~i~~~lg~~~~~~ 326 (427)
...++|+++.|+++..++.+|++|||++........+.+||+.|+|||++.+ ..+..++|+||+|++++.+.++..+|
T Consensus 138 ~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf 216 (343)
T cd07878 138 GIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALF 216 (343)
T ss_pred CeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCC
Confidence 4678899999999999999999999999877666677889999999999876 44666789999999998875555444
No 465
>KOG0658|consensus
Probab=98.61 E-value=2e-08 Score=95.41 Aligned_cols=80 Identities=31% Similarity=0.477 Sum_probs=61.6
Q ss_pred ceeeccCCccccccccc-chhhhhccCCCCCC--ccccccccccccccchHHhhhcc-CCCCCCHHHHHHHHHHhCCCCH
Q psy8260 249 PFYFQDLKPSNIAVNED-CELKILDFGLARPT--ENEMTGYVATRWYRAPEIMLNWM-HYNQTDIHQLNLIMEMLGTPPA 324 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~-~~~ki~d~g~~~~~--~~~~~~~~gt~~Y~APEvl~~~~-~~~~~d~~slg~i~~~lg~~~~ 324 (427)
...++|++|.|++++.+ +.+||+|||.|+.. ...-.+..-|.+|+|||.+.+.. |....|+||.||++.+|..+..
T Consensus 145 ~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p 224 (364)
T KOG0658|consen 145 GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP 224 (364)
T ss_pred CcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence 45678999999998876 88899999999853 22335666799999999998765 5556699999999987755544
Q ss_pred HHHh
Q psy8260 325 EFMA 328 (427)
Q Consensus 325 ~~~~ 328 (427)
-|..
T Consensus 225 lFpG 228 (364)
T KOG0658|consen 225 LFPG 228 (364)
T ss_pred ccCC
Confidence 4443
No 466
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.59 E-value=5.2e-08 Score=95.19 Aligned_cols=31 Identities=58% Similarity=0.979 Sum_probs=27.6
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCC
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPT 279 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~ 279 (427)
...++|+++.|+++..++.+|++|||++...
T Consensus 123 ~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 123 NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 4678899999999999999999999998643
No 467
>KOG2137|consensus
Probab=98.52 E-value=7.8e-08 Score=98.47 Aligned_cols=164 Identities=17% Similarity=0.249 Sum_probs=101.7
Q ss_pred HHHHHHHHHHhc-CceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeecc
Q psy8260 176 QILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQD 254 (427)
Q Consensus 176 qi~~aL~yLH~~-~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d 254 (427)
+++.||.|+|.. ++||+.|.|++|.++.++..||+.|+.+........ |= + +
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~-------~p-------~-------------~ 159 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE-------YP-------F-------------S 159 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc-------cc-------c-------------c
Confidence 455999999964 899999999999999999999999997754322111 00 0 1
Q ss_pred CCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHHHhhcCcHH
Q psy8260 255 LKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEFMAKISSDS 334 (427)
Q Consensus 255 ~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~~~~~~~~~ 334 (427)
.|..+.. .-..-...|.|||++.+.......|++|+|+.++..-....+.........
T Consensus 160 ~yd~~lp----------------------~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~ 217 (700)
T KOG2137|consen 160 EYDPPLP----------------------LLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL 217 (700)
T ss_pred cCCCCCC----------------------hhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcc
Confidence 1111100 001123568888888876666677999999766443211111111111111
Q ss_pred HHHHHhcCCCCCcccHHhhcCCCChhHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 335 ARKYINSLPLLTKKDFRQVFKGANPQAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
....-......... .+-..+.++.++=|.++|..|+..|+++.+++.-|||++.
T Consensus 218 ~~~~~~~~~~~~~~---~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~ 271 (700)
T KOG2137|consen 218 SYSFSRNLLNAGAF---GYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDP 271 (700)
T ss_pred hhhhhhcccccccc---cccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCc
Confidence 11111111111100 1114567899999999999999999999999999999864
No 468
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.48 E-value=1.3e-06 Score=80.84 Aligned_cols=135 Identities=24% Similarity=0.293 Sum_probs=93.3
Q ss_pred eeeccccCcccccEEEEeEEeCcCCcEEEEEEccCc------------------CCC--HHHHHHHHHHHHHHhcCCCC-
Q psy8260 66 IDIGPTLSKESFDLIFSSALDSVSGVKVAIKKIARP------------------FQS--AVHAKRTYRELRMLKHMNHE- 124 (427)
Q Consensus 66 ~~~~~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~------------------~~~--~~~~~~~~~Ei~~l~~l~Hp- 124 (427)
..++..||.|.=+.||.+. + ..|.++|||.-... ..+ ........+|.++|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~-~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAI-D-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HhhccccccCccceEEEEE-C-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 4688999999999999654 3 36899999964211 011 12334567899999998654
Q ss_pred -CceeeeeeeecCccccCCceEEEEeccCCC-CHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc
Q psy8260 125 -NVIGLLDVFHSNTCLADFKNVYMVTHLMGA-DLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202 (427)
Q Consensus 125 -nIv~l~~~~~~~~~~~~~~~~~lv~e~~g~-~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~ 202 (427)
.|.+.+++ +...++|++..| .|... +++......++..|+.-+.-.-..||||+|+.+=||+++
T Consensus 171 ~~VP~P~~~----------nRHaVvMe~ieG~eL~~~----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~ 236 (304)
T COG0478 171 VKVPKPIAW----------NRHAVVMEYIEGVELYRL----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT 236 (304)
T ss_pred CCCCCcccc----------ccceeeeehcccceeecc----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe
Confidence 66666655 335688888854 33322 223444444555566555555589999999999999999
Q ss_pred CCCCEEEeeCCCCC
Q psy8260 203 EDCELKILDFGLAR 216 (427)
Q Consensus 203 ~~~~~kl~DFGla~ 216 (427)
++|.+.++||--+.
T Consensus 237 ~dg~~~vIDwPQ~v 250 (304)
T COG0478 237 EDGDIVVIDWPQAV 250 (304)
T ss_pred cCCCEEEEeCcccc
Confidence 99999999996543
No 469
>KOG0671|consensus
Probab=98.38 E-value=3.5e-08 Score=94.11 Aligned_cols=62 Identities=31% Similarity=0.451 Sum_probs=54.1
Q ss_pred cchhhhhccCCCCCCccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHH
Q psy8260 265 DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEF 326 (427)
Q Consensus 265 ~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~ 326 (427)
+..+++.|||.|.-........+.|..|+||||+++-.+...+|+||+|||+.+|-++..-|
T Consensus 248 s~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LF 309 (415)
T KOG0671|consen 248 STAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLF 309 (415)
T ss_pred CcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceec
Confidence 56789999999987766678889999999999999999999999999999998886665544
No 470
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.38 E-value=4.1e-07 Score=90.46 Aligned_cols=80 Identities=41% Similarity=0.594 Sum_probs=63.8
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCc----cccccccccccccchHHhhhcc-CCCCCCHHHHHHHHHHhCCCC
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTE----NEMTGYVATRWYRAPEIMLNWM-HYNQTDIHQLNLIMEMLGTPP 323 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~----~~~~~~~gt~~Y~APEvl~~~~-~~~~~d~~slg~i~~~lg~~~ 323 (427)
...++|+++.|+++..++.+|++|||++.... .......+|+.|+|||++.+.. +..++|+||+|++++.|.++.
T Consensus 123 ~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 202 (372)
T cd07853 123 GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR 202 (372)
T ss_pred CeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCC
Confidence 46788999999999999999999999986432 1234457899999999998754 566779999999998887666
Q ss_pred HHHHh
Q psy8260 324 AEFMA 328 (427)
Q Consensus 324 ~~~~~ 328 (427)
.+|..
T Consensus 203 ~pf~~ 207 (372)
T cd07853 203 ILFQA 207 (372)
T ss_pred CCCCC
Confidence 65543
No 471
>KOG0669|consensus
Probab=98.30 E-value=4.7e-07 Score=82.12 Aligned_cols=78 Identities=33% Similarity=0.473 Sum_probs=63.2
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCC-------ccccccccccccccchHHhhhcc-CCCCCCHHHHHHHHHHhC
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPT-------ENEMTGYVATRWYRAPEIMLNWM-HYNQTDIHQLNLIMEMLG 320 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~-------~~~~~~~~gt~~Y~APEvl~~~~-~~~~~d~~slg~i~~~lg 320 (427)
.+.++|+++.|+++..++.+|++|||+++.. ....+.++.|.||+.||.+.+.. +....|+|..|||+..|-
T Consensus 144 kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMw 223 (376)
T KOG0669|consen 144 KILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMW 223 (376)
T ss_pred hHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHH
Confidence 4567799999999999999999999999642 22345678899999999988754 556679999999998887
Q ss_pred CCCHHH
Q psy8260 321 TPPAEF 326 (427)
Q Consensus 321 ~~~~~~ 326 (427)
+...-+
T Consensus 224 trspim 229 (376)
T KOG0669|consen 224 TRSPIM 229 (376)
T ss_pred ccCccc
Confidence 765433
No 472
>KOG0670|consensus
Probab=98.29 E-value=9.7e-08 Score=94.36 Aligned_cols=81 Identities=38% Similarity=0.498 Sum_probs=67.5
Q ss_pred ceeeccCCcccccccccc-hhhhhccCCCCC-CccccccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHH
Q psy8260 249 PFYFQDLKPSNIAVNEDC-ELKILDFGLARP-TENEMTGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEF 326 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~-~~ki~d~g~~~~-~~~~~~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~ 326 (427)
...++|+++.|+++.+.- .+|+||||.|.. .++.++.+..+..|+|||+|++.+|..+.|+||.||.+|+|=++..-|
T Consensus 556 ~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlF 635 (752)
T KOG0670|consen 556 GVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILF 635 (752)
T ss_pred CeeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceec
Confidence 456779999999999864 459999999975 455677778889999999999999999999999999999986666555
Q ss_pred Hhh
Q psy8260 327 MAK 329 (427)
Q Consensus 327 ~~~ 329 (427)
...
T Consensus 636 pG~ 638 (752)
T KOG0670|consen 636 PGR 638 (752)
T ss_pred CCC
Confidence 443
No 473
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.26 E-value=6.7e-07 Score=87.98 Aligned_cols=51 Identities=82% Similarity=1.329 Sum_probs=44.1
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhh
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIML 299 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~ 299 (427)
...++|+.+.|+++..++.++++|||++...........||+.|+|||++.
T Consensus 140 ~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~ 190 (345)
T cd07877 140 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 190 (345)
T ss_pred CeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHh
Confidence 467889999999999999999999999987665556678899999999863
No 474
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.25 E-value=4.5e-07 Score=87.59 Aligned_cols=50 Identities=44% Similarity=0.802 Sum_probs=40.8
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCcc---ccccccccccccchHHh
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTEN---EMTGYVATRWYRAPEIM 298 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~---~~~~~~gt~~Y~APEvl 298 (427)
...++|+++.|+++..++.+|++|||.+..... ......+|+.|+|||++
T Consensus 124 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~ 176 (309)
T cd07872 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVL 176 (309)
T ss_pred CeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHH
Confidence 467889999999999999999999999865322 23346789999999985
No 475
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.17 E-value=7.6e-07 Score=87.46 Aligned_cols=78 Identities=58% Similarity=0.957 Sum_probs=64.6
Q ss_pred eeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-cCCCCCCHHHHHHHHHHhCCCCHHHH
Q psy8260 250 FYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-MHYNQTDIHQLNLIMEMLGTPPAEFM 327 (427)
Q Consensus 250 ~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-~~~~~~d~~slg~i~~~lg~~~~~~~ 327 (427)
..++|+.+.|+++..++.++++|||++........+..+|+.|+|||++.+. .+..++|+||+|++++.|-++..+|.
T Consensus 138 i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 138 IIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence 5678999999999999999999999998765555667889999999998763 45667899999999988866555553
No 476
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.15 E-value=2.7e-06 Score=83.62 Aligned_cols=79 Identities=66% Similarity=0.991 Sum_probs=64.9
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhhc-cCCCCCCHHHHHHHHHHhCCCCHHHH
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNW-MHYNQTDIHQLNLIMEMLGTPPAEFM 327 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~-~~~~~~d~~slg~i~~~lg~~~~~~~ 327 (427)
...++|+++.|+++..++.++++|||.+...........+|+.|+|||++.+. .+..++|+||+|++++.+.++..+|.
T Consensus 138 gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~ 217 (343)
T cd07851 138 GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP 217 (343)
T ss_pred CeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 46778999999999999999999999998765556667889999999998753 45567899999999988866655553
No 477
>KOG0662|consensus
Probab=98.08 E-value=1e-06 Score=76.04 Aligned_cols=91 Identities=34% Similarity=0.553 Sum_probs=66.9
Q ss_pred ccccchhhhhcccccCCCCcce------eeccCCcccccccccchhhhhccCCCCCCcc---ccccccccccccchHHhh
Q psy8260 229 RWYRAPEIMLNWMHYNQTGVPF------YFQDLKPSNIAVNEDCELKILDFGLARPTEN---EMTGYVATRWYRAPEIML 299 (427)
Q Consensus 229 ~~y~aPE~l~~~~~~~~~~~~~------~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~---~~~~~~gt~~Y~APEvl~ 299 (427)
..|+.||+......---.+..+ -++|+++-|.++..+++.|++|||+++.-.- -....+.|.||+.|.|+.
T Consensus 95 ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlf 174 (292)
T KOG0662|consen 95 NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174 (292)
T ss_pred CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceee
Confidence 3578888755422111111111 3458999999999999999999999985322 245678899999999998
Q ss_pred hccCCCCC-CHHHHHHHHHHh
Q psy8260 300 NWMHYNQT-DIHQLNLIMEML 319 (427)
Q Consensus 300 ~~~~~~~~-d~~slg~i~~~l 319 (427)
+...+..+ |+||.|+|+.++
T Consensus 175 gakly~tsidmwsagcifael 195 (292)
T KOG0662|consen 175 GAKLYSTSIDMWSAGCIFAEL 195 (292)
T ss_pred eeehhccchHhhhcchHHHHH
Confidence 87766655 999999999877
No 478
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.03 E-value=4e-06 Score=82.43 Aligned_cols=50 Identities=74% Similarity=1.275 Sum_probs=43.6
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
.+.++|+.+.|+++..++.++++|||.+........+..+++.|+|||++
T Consensus 138 gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~ 187 (343)
T cd07880 138 GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVI 187 (343)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHH
Confidence 46788999999999999999999999998766555667889999999986
No 479
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.02 E-value=5.7e-06 Score=80.88 Aligned_cols=80 Identities=45% Similarity=0.671 Sum_probs=62.9
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCcc-------ccccccccccccchHHhhh-ccCCCCCCHHHHHHHHHHhC
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTEN-------EMTGYVATRWYRAPEIMLN-WMHYNQTDIHQLNLIMEMLG 320 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~-------~~~~~~gt~~Y~APEvl~~-~~~~~~~d~~slg~i~~~lg 320 (427)
...++|+.+.|+.+..++.+|++|||.+..... ...+..|+.+|+|||++.+ ..+..++|+|++|++++.+.
T Consensus 127 ~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~ 206 (334)
T cd07855 127 NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML 206 (334)
T ss_pred CeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHH
Confidence 367789999999999999999999999864321 1134578999999999865 34667789999999998886
Q ss_pred CCCHHHHh
Q psy8260 321 TPPAEFMA 328 (427)
Q Consensus 321 ~~~~~~~~ 328 (427)
++..+|..
T Consensus 207 ~g~~pf~~ 214 (334)
T cd07855 207 GRRQLFPG 214 (334)
T ss_pred cCCCccCC
Confidence 66666643
No 480
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.01 E-value=3.3e-06 Score=82.61 Aligned_cols=31 Identities=55% Similarity=0.932 Sum_probs=27.1
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCC
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPT 279 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~ 279 (427)
...++|+.+.|+.+..++.+|++|||++...
T Consensus 126 ~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 126 NVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred CeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 4677899999999999999999999988643
No 481
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=97.97 E-value=3.3e-06 Score=82.24 Aligned_cols=31 Identities=61% Similarity=0.962 Sum_probs=27.3
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCC
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPT 279 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~ 279 (427)
...++|+.+.|+++..++.++++|||.+...
T Consensus 123 gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 123 NVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred CeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 3678899999999999999999999988654
No 482
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=97.94 E-value=5.3e-06 Score=81.06 Aligned_cols=31 Identities=61% Similarity=0.948 Sum_probs=27.1
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCC
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPT 279 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~ 279 (427)
...++|+++.|+++..++.+|++|||.+...
T Consensus 125 givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 125 NVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred CcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 3577899999999999999999999988643
No 483
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=97.92 E-value=6.4e-06 Score=80.67 Aligned_cols=50 Identities=60% Similarity=1.059 Sum_probs=40.4
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCcc---ccccccccccccchHHh
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTEN---EMTGYVATRWYRAPEIM 298 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~---~~~~~~gt~~Y~APEvl 298 (427)
.+.++|+.+.|+++..++.+|++|||++..... ......+|..|+|||++
T Consensus 128 ~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~ 180 (337)
T cd07858 128 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELL 180 (337)
T ss_pred CEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHH
Confidence 467789999999999999999999999875432 22345789999999984
No 484
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.92 E-value=5e-06 Score=78.94 Aligned_cols=46 Identities=52% Similarity=0.806 Sum_probs=33.4
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCccc----cccccccccccc
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTENE----MTGYVATRWYRA 294 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~----~~~~~gt~~Y~A 294 (427)
...++|+.+.|+.+..++.++++|||.+...... .....|+..|+|
T Consensus 119 ~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~a 168 (286)
T cd07832 119 GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRA 168 (286)
T ss_pred CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccC
Confidence 3678899999999999999999999988754322 223445555543
No 485
>KOG1290|consensus
Probab=97.90 E-value=4.6e-06 Score=82.20 Aligned_cols=91 Identities=31% Similarity=0.391 Sum_probs=62.6
Q ss_pred CCCEEEeeCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCcccccccccchhhhhccCCCCCCcccc
Q psy8260 204 DCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIAVNEDCELKILDFGLARPTENEM 283 (427)
Q Consensus 204 ~~~~kl~DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~ 283 (427)
+..|||+|||-|+-.....|.-+.|+.|+|||+|+|..... ..|+||..|+.-| ..
T Consensus 390 di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~-------~ADiWS~AC~~FE-----------------La 445 (590)
T KOG1290|consen 390 DIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYST-------SADIWSTACMAFE-----------------LA 445 (590)
T ss_pred ceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCC-------chhHHHHHHHHHH-----------------hh
Confidence 45799999999998887888889999999999999864333 2399999998765 11
Q ss_pred ccccccccccchHHhhhccCCCCCCHHHHHHHHHHhCCCCHHH
Q psy8260 284 TGYVATRWYRAPEIMLNWMHYNQTDIHQLNLIMEMLGTPPAEF 326 (427)
Q Consensus 284 ~~~~gt~~Y~APEvl~~~~~~~~~d~~slg~i~~~lg~~~~~~ 326 (427)
+|.. .| .|- .+ -....|-..++.|+.+||.-|..+
T Consensus 446 TGDy---LF-ePh--sG--~~Y~rDEDHiA~i~ELLG~iPr~i 480 (590)
T KOG1290|consen 446 TGDY---LF-EPH--SG--ENYSRDEDHIALIMELLGKIPRKI 480 (590)
T ss_pred cCce---ee-cCC--CC--CCCCccHHHHHHHHHHHhhccHHH
Confidence 1111 00 000 00 011236778999999998877655
No 486
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=97.88 E-value=6.9e-06 Score=80.39 Aligned_cols=31 Identities=55% Similarity=0.921 Sum_probs=27.4
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCC
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPT 279 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~ 279 (427)
.+.++|+.+.|+.+..++.+|++|||.+...
T Consensus 127 ~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 127 NVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred CeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 4677899999999999999999999988654
No 487
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=97.84 E-value=4.9e-06 Score=81.29 Aligned_cols=50 Identities=66% Similarity=1.101 Sum_probs=42.5
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHh
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIM 298 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl 298 (427)
...++|+.+.|+++..++.++++|||.+........+..+++.|+|||++
T Consensus 128 ~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~ 177 (328)
T cd07856 128 GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIM 177 (328)
T ss_pred CcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceee
Confidence 35678999999999999999999999998665555567789999999975
No 488
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.82 E-value=0.00052 Score=61.85 Aligned_cols=131 Identities=20% Similarity=0.334 Sum_probs=82.1
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcC--------------CCHHHHHHHHHHHHHHhcCC------CCCceee
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPF--------------QSAVHAKRTYRELRMLKHMN------HENVIGL 129 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~--------------~~~~~~~~~~~Ei~~l~~l~------HpnIv~l 129 (427)
..+|.|+.=.||. +. ......||++.... .......+..+|+.....+. +..|.++
T Consensus 7 ~~i~~G~~R~cy~---HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 7 DLIAQGGERDCYQ---HP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred cccccCCCceEEE---CC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 4678888766663 22 22345677765433 01112344556665555444 7789999
Q ss_pred eeeeecCccccCCceEEEEeccC----C---CCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEc
Q psy8260 130 LDVFHSNTCLADFKNVYMVTHLM----G---ADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 202 (427)
Q Consensus 130 ~~~~~~~~~~~~~~~~~lv~e~~----g---~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~ 202 (427)
+++.+++.. .-+|+|.. | .+|.++++.+.+++ .... .+-.-.+||-+.+|+.+||+|.||++.
T Consensus 83 ~G~veT~~G------~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 83 YGFVETNLG------LGLVVELIRDADGNISPTLEDYLKEGGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQ 152 (199)
T ss_pred eEEEecCCc------eEEEEEEEECCCCCcCccHHHHHHcCCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEE
Confidence 999887532 23444432 2 36888888777777 3322 333445688899999999999999996
Q ss_pred CC--C--CEEEee-CCC
Q psy8260 203 ED--C--ELKILD-FGL 214 (427)
Q Consensus 203 ~~--~--~~kl~D-FGl 214 (427)
.. + .+.|+| ||-
T Consensus 153 ~~~~~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 153 RRDSGEFRLVLIDGLGE 169 (199)
T ss_pred ecCCCceEEEEEeCCCC
Confidence 32 2 588998 553
No 489
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.81 E-value=0.00024 Score=65.34 Aligned_cols=137 Identities=22% Similarity=0.220 Sum_probs=89.4
Q ss_pred ccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC--------------------HHHHH-H-HHHHHHHHhcCC--CCCc
Q psy8260 71 TLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS--------------------AVHAK-R-TYRELRMLKHMN--HENV 126 (427)
Q Consensus 71 ~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~--------------------~~~~~-~-~~~Ei~~l~~l~--HpnI 126 (427)
.|+.|.=..||.+.. .++..||||+....... ..... . ..+|..-|+++. +-.+
T Consensus 55 ~istGKEA~Vy~a~~--~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 55 CISTGKEANVYLAET--GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eecCCcceEEEeecc--CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 566666677886542 46789999986532111 11110 1 235777777663 3344
Q ss_pred eeeeeeeecCccccCCceEEEEeccCCCCHH--HHHhhCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCCeEEcC
Q psy8260 127 IGLLDVFHSNTCLADFKNVYMVTHLMGADLN--NILRTQKLSDDHVQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNE 203 (427)
Q Consensus 127 v~l~~~~~~~~~~~~~~~~~lv~e~~g~~L~--~~l~~~~l~~~~~~~~~~qi~~aL~yLH~-~~iiHrDLKp~NILl~~ 203 (427)
.+-+.++ .-.++||+.|.... -.|+.-.+...++..+..+++..+.-|-. .++||.||..=|||+.
T Consensus 133 P~Pi~~~----------~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~- 201 (268)
T COG1718 133 PEPIAFR----------NNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH- 201 (268)
T ss_pred CCceeec----------CCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-
Confidence 4444442 23688999875511 11222334444688888899999988865 8999999999999999
Q ss_pred CCCEEEeeCCCCCCCCC
Q psy8260 204 DCELKILDFGLARPTEN 220 (427)
Q Consensus 204 ~~~~kl~DFGla~~~~~ 220 (427)
++.+.|+|||-|.....
T Consensus 202 ~~~p~iID~~QaV~~~h 218 (268)
T COG1718 202 DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred CCeEEEEECccccccCC
Confidence 88999999998865543
No 490
>KOG0577|consensus
Probab=97.80 E-value=5.4e-06 Score=83.43 Aligned_cols=51 Identities=31% Similarity=0.501 Sum_probs=43.7
Q ss_pred ceeeccCCcccccccccchhhhhccCCCCCCccccccccccccccchHHhhh
Q psy8260 249 PFYFQDLKPSNIAVNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLN 300 (427)
Q Consensus 249 ~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~ 300 (427)
..++.|++++|+++.+.+.||++|||.+... ....+++|||+|||||||+-
T Consensus 146 ~~IHRDiKAGNILLse~g~VKLaDFGSAsi~-~PAnsFvGTPywMAPEVILA 196 (948)
T KOG0577|consen 146 NRIHRDIKAGNILLSEPGLVKLADFGSASIM-APANSFVGTPYWMAPEVILA 196 (948)
T ss_pred hHHhhhccccceEecCCCeeeeccccchhhc-CchhcccCCccccchhHhee
Confidence 3567899999999999999999999988542 34568999999999999865
No 491
>KOG1035|consensus
Probab=97.80 E-value=0.00015 Score=78.84 Aligned_cols=202 Identities=23% Similarity=0.290 Sum_probs=114.6
Q ss_pred HHHHHHHHHHhcCCCCCceeeeeeeecCccccCCceEEEEeccC-CCCHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHh
Q psy8260 109 KRTYRELRMLKHMNHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNILRT-QKLSDDHVQFLVYQILRGLKYIHS 186 (427)
Q Consensus 109 ~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~l~~-~~l~~~~~~~~~~qi~~aL~yLH~ 186 (427)
.....|+..+.+..|+|++.++.|--..-+.. -.+.+..+++ ..++...+.. +..+...++.+..++.+||.|+|+
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g--~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRG--IVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcch--HHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHH
Confidence 33456778888999999999887743221110 0122233444 4455555543 567888999999999999999999
Q ss_pred cCceeccCCCC---CeEEcCCCCEEEe--eCCCCCCCCCCcccccccccccchhhhhcccccCCCCcceeeccCCccccc
Q psy8260 187 AGIIHRDLKPS---NIAVNEDCELKIL--DFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQTGVPFYFQDLKPSNIA 261 (427)
Q Consensus 187 ~~iiHrDLKp~---NILl~~~~~~kl~--DFGla~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~~d~~~~~~~ 261 (427)
....|.=|-.+ +--.+..+.+.++ ||+..+........
T Consensus 305 ~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~------------------------------------- 347 (1351)
T KOG1035|consen 305 LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS------------------------------------- 347 (1351)
T ss_pred hccceeEEecccccccccCccceeecchhhhcccccCCCcccc-------------------------------------
Confidence 86555444333 2223334445555 66655433221110
Q ss_pred ccccchhhhhccCCCCCCccccccccccccccchHHhhhccCCCC--CCHHHHHHHHHHh--CCCCHHHHhhcCcHHHHH
Q psy8260 262 VNEDCELKILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYNQ--TDIHQLNLIMEML--GTPPAEFMAKISSDSARK 337 (427)
Q Consensus 262 ~~~~~~~ki~d~g~~~~~~~~~~~~~gt~~Y~APEvl~~~~~~~~--~d~~slg~i~~~l--g~~~~~~~~~~~~~~~~~ 337 (427)
....-+..+.|+|.........+ .|+|++|...--+ |........
T Consensus 348 ----------------------~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~--------- 396 (1351)
T KOG1035|consen 348 ----------------------FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA--------- 396 (1351)
T ss_pred ----------------------hhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCccccccc---------
Confidence 00011122334443332222222 4999998665322 222211100
Q ss_pred HHhcCCCCCcccHHhhcCCCCh-hHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q psy8260 338 YINSLPLLTKKDFRQVFKGANP-QAIDLLSLMLELDSEKRITAEQALAHPYLSQY 391 (427)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~s~-~~~dLi~~mL~~dP~~R~ta~e~L~Hp~f~~~ 391 (427)
....+....+. +..|++.+|+.-|+++|+++.+++.|||.+..
T Consensus 397 -----------~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~ 440 (1351)
T KOG1035|consen 397 -----------VPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFP 440 (1351)
T ss_pred -----------chhhhhccccchhhhhhhhhhcchhhhhccchhhhhhchhcccc
Confidence 00111112222 67799999999999999999999999999743
No 492
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.77 E-value=0.00023 Score=73.16 Aligned_cols=142 Identities=20% Similarity=0.327 Sum_probs=83.9
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCC---------------------------HH-H----HH------HH
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQS---------------------------AV-H----AK------RT 111 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~---------------------------~~-~----~~------~~ 111 (427)
..++.++-|.||.+.+. +|+.||||+....-.. .. . .+ ..
T Consensus 131 ~PiAsASIaQVH~A~L~--sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy 208 (517)
T COG0661 131 EPIASASIAQVHRAVLK--SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY 208 (517)
T ss_pred CchhhhhHhhheeEEec--CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence 46778888999988874 4999999986532100 00 0 01 12
Q ss_pred HHHHHHHhcC----CCCCceeeeeeeecCccccCCceEEEEeccC-CCCHHHH--HhhCCCCHHHHHHHHHHHHHHHHHH
Q psy8260 112 YRELRMLKHM----NHENVIGLLDVFHSNTCLADFKNVYMVTHLM-GADLNNI--LRTQKLSDDHVQFLVYQILRGLKYI 184 (427)
Q Consensus 112 ~~Ei~~l~~l----~HpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~--l~~~~l~~~~~~~~~~qi~~aL~yL 184 (427)
.+|...+.++ ++..=+.+-.+|.. .| ..-.++||+. |-.+.++ ++..+++.+.+.....++ -+.-+
T Consensus 209 ~~EA~n~~~~~~nf~~~~~v~VP~V~we-~t----~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~--f~~q~ 281 (517)
T COG0661 209 RREAANAERFRENFKDDPDVYVPKVYWE-YT----TRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRA--FLRQL 281 (517)
T ss_pred HHHHHHHHHHHHHcCCCCCeEeceeehh-cc----CCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHH--HHHHH
Confidence 2355444433 22222233333321 11 2236778877 5456555 445566643332222111 12223
Q ss_pred HhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCC
Q psy8260 185 HSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTEN 220 (427)
Q Consensus 185 H~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~ 220 (427)
-..|+.|.|..|.||+++.+|.+.+.|||+......
T Consensus 282 ~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 282 LRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 348999999999999999999999999999876554
No 493
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.63 E-value=0.00094 Score=60.71 Aligned_cols=66 Identities=27% Similarity=0.521 Sum_probs=48.7
Q ss_pred eEEEEeccC-CCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCC
Q psy8260 144 NVYMVTHLM-GADLNNILRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARP 217 (427)
Q Consensus 144 ~~~lv~e~~-g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~ 217 (427)
..++++|+. |..|.+... +++. +...+..++.-+|+.|+.|+|..|.|++++.+ .++++||+..+.
T Consensus 117 ~~~ll~EYIeG~~l~d~~~---i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~~~k~~ 183 (229)
T PF06176_consen 117 SYVLLMEYIEGVELNDIED---IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDTQGKRM 183 (229)
T ss_pred EEEEEEEEecCeecccchh---cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEECccccc
Confidence 456788888 545554321 3332 34567788999999999999999999999855 499999987653
No 494
>KOG0599|consensus
Probab=97.62 E-value=1.2e-05 Score=73.89 Aligned_cols=52 Identities=33% Similarity=0.504 Sum_probs=44.7
Q ss_pred eeeccCCcccccccccchhhhhccCCCCCC--ccccccccccccccchHHhhhc
Q psy8260 250 FYFQDLKPSNIAVNEDCELKILDFGLARPT--ENEMTGYVATRWYRAPEIMLNW 301 (427)
Q Consensus 250 ~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~--~~~~~~~~gt~~Y~APEvl~~~ 301 (427)
.-+.|+++.|++++++..+|++|||+++.. ...+...||||+|+|||++.=.
T Consensus 144 IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~ 197 (411)
T KOG0599|consen 144 IVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCS 197 (411)
T ss_pred hhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeee
Confidence 446799999999999999999999999864 3456789999999999998643
No 495
>KOG0576|consensus
Probab=97.58 E-value=1.4e-05 Score=81.54 Aligned_cols=150 Identities=17% Similarity=0.207 Sum_probs=90.7
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCC-ceeeeeeeecCccccCCceEEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN-VIGLLDVFHSNTCLADFKNVYMV 148 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~Hpn-Iv~l~~~~~~~~~~~~~~~~~lv 148 (427)
..+++++.+.++++ ....+...+ .+.+... ....-++++|.+++||| .+..++-+.. .....+.
T Consensus 248 h~fvK~altknpKk-RptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~------E~~~~i~ 312 (829)
T KOG0576|consen 248 HNFVKGALTKNPKK-RPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDG------EDYLWIP 312 (829)
T ss_pred HHHHHHHhcCCCcc-CCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCc------ccccchh
Confidence 45678888888853 233333333 5544321 22334888999999999 4444433222 2345677
Q ss_pred eccCCCC--HHHHH--hhCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCeEEcCCCCEEEeeCCCCCCCCCC--c
Q psy8260 149 THLMGAD--LNNIL--RTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTENE--M 222 (427)
Q Consensus 149 ~e~~g~~--L~~~l--~~~~l~~~~~~~~~~qi~~aL~yLH~~~iiHrDLKp~NILl~~~~~~kl~DFGla~~~~~~--~ 222 (427)
++++++. -.... ..-.+.+-......+.-.++++|+|+.--+||| |||..+ +..|..|||........ .
T Consensus 313 ~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~ 387 (829)
T KOG0576|consen 313 MRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKP 387 (829)
T ss_pred hhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccccc
Confidence 7777533 11100 011233333444566678899999998779999 877654 68899999988766544 3
Q ss_pred ccccccccccchhhhhc
Q psy8260 223 TGYVATRWYRAPEIMLN 239 (427)
Q Consensus 223 ~~~~gt~~y~aPE~l~~ 239 (427)
++..+|+.++|||++.+
T Consensus 388 ~t~~~~~~~~~pev~~~ 404 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQE 404 (829)
T ss_pred ccCCCCCCCCCchhhcc
Confidence 44566677777776544
No 496
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.50 E-value=0.00048 Score=61.62 Aligned_cols=95 Identities=21% Similarity=0.241 Sum_probs=71.6
Q ss_pred HHHHHHhcCCC-CCceeeeeeeecCccccCCceEEEEeccCCCCHHH----HHhhCCCCHHHHHHHHHHHHHHHHHHHh-
Q psy8260 113 RELRMLKHMNH-ENVIGLLDVFHSNTCLADFKNVYMVTHLMGADLNN----ILRTQKLSDDHVQFLVYQILRGLKYIHS- 186 (427)
Q Consensus 113 ~Ei~~l~~l~H-pnIv~l~~~~~~~~~~~~~~~~~lv~e~~g~~L~~----~l~~~~l~~~~~~~~~~qi~~aL~yLH~- 186 (427)
.|.-+|+.+++ +++.+++|.. +.+|++++...+.+.. +.+-...++....+++.|++..+.+++.
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C---------G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~ 78 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC---------GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHG 78 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC---------CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence 58888888876 6899999874 2356555544344421 1111235888999999999999999987
Q ss_pred --cCceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 187 --AGIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 187 --~~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
..+.-.|++|+|+-+++++.+|++|...+.
T Consensus 79 ~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~ 110 (188)
T PF12260_consen 79 PLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVF 110 (188)
T ss_pred CCCcEEEeecchHHeEEeCCCcEEEEechhcc
Confidence 357789999999999999999999987654
No 497
>KOG0984|consensus
Probab=97.48 E-value=3.2e-05 Score=68.57 Aligned_cols=80 Identities=25% Similarity=0.301 Sum_probs=63.8
Q ss_pred CcceeeccCCcccccccccchhhhhccCCCCCCcc-cccc-ccccccccchHHhhhc----cCCCCCCHHHHHHHHHHhC
Q psy8260 247 GVPFYFQDLKPSNIAVNEDCELKILDFGLARPTEN-EMTG-YVATRWYRAPEIMLNW----MHYNQTDIHQLNLIMEMLG 320 (427)
Q Consensus 247 ~~~~~~~d~~~~~~~~~~~~~~ki~d~g~~~~~~~-~~~~-~~gt~~Y~APEvl~~~----~~~~~~d~~slg~i~~~lg 320 (427)
....+++|++++|++++.++++|++|||.+.-... ...+ ..|...|||||.+... .|.-++|+||||+.+.+|.
T Consensus 167 kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA 246 (282)
T KOG0984|consen 167 KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMA 246 (282)
T ss_pred HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhh
Confidence 34567889999999999999999999999986533 3344 6889999999998643 4555789999999988886
Q ss_pred CCCHHH
Q psy8260 321 TPPAEF 326 (427)
Q Consensus 321 ~~~~~~ 326 (427)
+...|+
T Consensus 247 ~lr~PY 252 (282)
T KOG0984|consen 247 ILRFPY 252 (282)
T ss_pred hccccc
Confidence 665544
No 498
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.45 E-value=0.00078 Score=61.65 Aligned_cols=137 Identities=24% Similarity=0.305 Sum_probs=69.7
Q ss_pred cccCcccccEEEEeEEeCcCCcEEEEEEccCcCCCHHHHHHHHHHHHHHhcCCCCC--ceeeeeeeecCccccCCceEEE
Q psy8260 70 PTLSKESFDLIFSSALDSVSGVKVAIKKIARPFQSAVHAKRTYRELRMLKHMNHEN--VIGLLDVFHSNTCLADFKNVYM 147 (427)
Q Consensus 70 ~~lg~g~fg~v~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~~~~~~~~~~~~~~~~~l 147 (427)
+.++.|..+.||....+ +..+++|..... .......+|..+++.+.... +.+++....... .....++
T Consensus 3 ~~l~~G~~n~~~~v~~~---~~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~---~~~~~~~ 72 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTD---DGRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDE---FNGFPYL 72 (239)
T ss_dssp EEEEESSSSEEEEEEET---TSEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETE---ETSEEEE
T ss_pred ccCCCCCeeeEEEEEEC---CcEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeeccccc---ccccceE
Confidence 35677888889965432 248999986432 33455668888887775433 445554322111 1123566
Q ss_pred EeccC-CCCHHH----------------HHh---hC-----CCCHHH---H---HHH---------------HHHHHH-H
Q psy8260 148 VTHLM-GADLNN----------------ILR---TQ-----KLSDDH---V---QFL---------------VYQILR-G 180 (427)
Q Consensus 148 v~e~~-g~~L~~----------------~l~---~~-----~l~~~~---~---~~~---------------~~qi~~-a 180 (427)
++++. |..+.. .+. .. .+.... . ... ...+.. .
T Consensus 73 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (239)
T PF01636_consen 73 LMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERL 152 (239)
T ss_dssp EEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred EEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHH
Confidence 77766 444444 111 11 111000 0 000 001122 2
Q ss_pred HHHHH-------hcCceeccCCCCCeEEc-CCCCEEEeeCCCCC
Q psy8260 181 LKYIH-------SAGIIHRDLKPSNIAVN-EDCELKILDFGLAR 216 (427)
Q Consensus 181 L~yLH-------~~~iiHrDLKp~NILl~-~~~~~kl~DFGla~ 216 (427)
+..++ ...++|+|+.|.|||++ .++.+.|+||+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 153 LQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 33333 24599999999999999 66667899998764
No 499
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.43 E-value=0.0045 Score=55.63 Aligned_cols=133 Identities=23% Similarity=0.250 Sum_probs=83.8
Q ss_pred cceeeccccCcccc-cEEEEeEEeCcCCcEEEEEEccC---cC-------CC--H-------HHHHHHHHHHHHHhcC--
Q psy8260 64 GVIDIGPTLSKESF-DLIFSSALDSVSGVKVAIKKIAR---PF-------QS--A-------VHAKRTYRELRMLKHM-- 121 (427)
Q Consensus 64 ~~~~~~~~lg~g~f-g~v~~~~~~~~~g~~vAvK~i~~---~~-------~~--~-------~~~~~~~~Ei~~l~~l-- 121 (427)
..+++.+.||.|.- |.||+... .|+.+|+|.... .. .. . ....-+..|.+...+|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I---~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI---DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE---CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 67888999999999 99997654 577999998211 00 00 0 1122355677655544
Q ss_pred -CCCCc--eeeeeeeecCc--cc----------cCCceEEEEeccCCCCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8260 122 -NHENV--IGLLDVFHSNT--CL----------ADFKNVYMVTHLMGADLNNILRTQKLSDDHVQFLVYQILRGLKYIHS 186 (427)
Q Consensus 122 -~HpnI--v~l~~~~~~~~--~~----------~~~~~~~lv~e~~g~~L~~~l~~~~l~~~~~~~~~~qi~~aL~yLH~ 186 (427)
++.++ |+.++|+.-.. -. ......-||.++....- .+... -+.++.+-|..+|.
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------~~~~~----~~~~~~~dl~~~~k 182 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------PLQIR----DIPQMLRDLKILHK 182 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------ccchh----HHHHHHHHHHHHHH
Confidence 55666 88888863210 00 01122345555442111 12222 34577888899999
Q ss_pred cCceeccCCCCCeEEcCCCCEEEeeCCCC
Q psy8260 187 AGIIHRDLKPSNIAVNEDCELKILDFGLA 215 (427)
Q Consensus 187 ~~iiHrDLKp~NILl~~~~~~kl~DFGla 215 (427)
.||+-+|+|+.|.. .-||+|||.+
T Consensus 183 ~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 183 LGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred CCeeeccCcccccc-----CCEEEecccC
Confidence 99999999999986 3489999964
No 500
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.43 E-value=0.0021 Score=59.34 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=25.2
Q ss_pred CceeccCCCCCeEEcCCCCEEEeeCCCCC
Q psy8260 188 GIIHRDLKPSNIAVNEDCELKILDFGLAR 216 (427)
Q Consensus 188 ~iiHrDLKp~NILl~~~~~~kl~DFGla~ 216 (427)
.++|+|+.|.||+++.++ +.|+||+.+.
T Consensus 154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 478999999999999888 9999999765
Done!