BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8265
(630 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307200794|gb|EFN80847.1| Aryl hydrocarbon receptor [Harpegnathos saltator]
Length = 704
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/382 (65%), Positives = 272/382 (71%), Gaps = 57/382 (14%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+K+LHGQNRK EEPPLALFA+CTPFGPPSLLE+P KEVMFKSKHKLDL+LV+M
Sbjct: 74 RLDIRGRVKVLHGQNRKTEEPPLALFALCTPFGPPSLLEVPQKEVMFKSKHKLDLALVTM 133
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGKMLLGYSD EL N+GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT DGGWQ
Sbjct: 134 DQRGKMLLGYSDAELTNLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGGWQ 193
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFV+STHRPLMEEEGRDLLGKRTMDFKVSYLDAGL NSYFSDSD
Sbjct: 194 WLQTSSRLVYKNSKPDFVLSTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLTNSYFSDSDS 253
Query: 412 LTPSHQ--TLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKR-KMSAQHAAPPP 468
LT S TL P PQRVNRRYKTQLRDFLSTCR+KR K++AQ + PP
Sbjct: 254 LTGSVMTPTLPAQPA----------PQRVNRRYKTQLRDFLSTCRSKRTKLTAQSSVSPP 303
Query: 469 PTP-APPIEYL----------------------TP--PDAVAAAYSNMYTTGYSATTPEY 503
TP ++YL TP P AVAA+ TT Y T Y
Sbjct: 304 VTPTVASVDYLAADTSAAAAVAAAYSNLNTMYPTPYAPTAVAASTDPSLTT-YIGHTGNY 362
Query: 504 MSQSLY-----DNR---LPYENLFHQYRP---YYPEYQPYTVSNGF---SLPTYEVNK-- 547
Q+LY DNR ENLF QYRP YYPEY T NGF SLPTYE ++
Sbjct: 363 -HQTLYPATALDNRYLTAATENLF-QYRPLSSYYPEYHTGTTYNGFIDVSLPTYETHQLT 420
Query: 548 SNDCDKLYCHQTLTADQNSKGY 569
S DKLYC Q + + GY
Sbjct: 421 SKTEDKLYCQQLGSGESPKYGY 442
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 121/230 (52%), Gaps = 38/230 (16%)
Query: 23 YHFVLTPLNSVINLITHAI------YRP---YYPEYQPYTVSNGF---SLPTYEVNK--S 68
YH L P ++ N A YRP YYPEY T NGF SLPTYE ++ S
Sbjct: 362 YHQTLYPATALDNRYLTAATENLFQYRPLSSYYPEYHTGTTYNGFIDVSLPTYETHQLTS 421
Query: 69 NDCDKLYCHQTLTADQNSKGY----------SSPYITLPLCSDL---PQSHKLPSKSLNS 115
DKLYC Q + + GY SSPY P+ S P + + S
Sbjct: 422 KTEDKLYCQQLGSGESPKYGYVETRHPGSVSSSPYAASPVASASTMHPATTDINVVRAGS 481
Query: 116 K-SLDGLSSNDSS----PV--PSNHLVTPKVEDIKSESFNYSEVPRQTVLMWGSNPSRSP 168
+ SL+G +S+ +S PV +N ++TPK+ED+K E ++ ++ PRQTVLMWG+ PSR+P
Sbjct: 482 RHSLEGGASSSNSAGSSPVTGAANGVLTPKMEDVKPEVYSNNDAPRQTVLMWGAPPSRTP 541
Query: 169 P---ASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTI-GENKWKESPPV 214
P S P H + S GDPLKSLAEMN++ G+ KW+++ P
Sbjct: 542 PRNNGSYSPPTPHSTHSSTHSTNATGDPLKSLAEMNSMNGDCKWRQTSPT 591
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 49/58 (84%)
Query: 573 FESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSYLLERSFT 630
+SDIVHQSVYELVHSEDREELQRQLMWNSFLP ESA + L + ++S+LLERSFT
Sbjct: 2 LQSDIVHQSVYELVHSEDREELQRQLMWNSFLPAESASLPLHDALSPQHSHLLERSFT 59
>gi|332018425|gb|EGI59019.1| Aryl hydrocarbon receptor [Acromyrmex echinatior]
Length = 759
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/369 (66%), Positives = 265/369 (71%), Gaps = 55/369 (14%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+K+LHGQNRK EEPPLALFA+CTPFGPPSLLE+P KEVMFKSKHKLDL+LV+M
Sbjct: 47 RLDIRGRVKVLHGQNRKTEEPPLALFALCTPFGPPSLLEVPQKEVMFKSKHKLDLALVTM 106
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQ+GKMLLGYSD EL N+GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT DGGWQ
Sbjct: 107 DQKGKMLLGYSDAELTNLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGGWQ 166
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFV+STHRPLMEEEGRDLLGKRTMDFKVSYLDAGL NSYFSDSD
Sbjct: 167 WLQTSSRLVYKNSKPDFVLSTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLTNSYFSDSDT 226
Query: 412 LTPSHQ--TLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPP 469
LT S TL P PQRVNRRYKTQLRDFLS+CR KRK+S+Q + PP
Sbjct: 227 LTGSVMTPTLPAQPA----------PQRVNRRYKTQLRDFLSSCRNKRKLSSQSSVSPPA 276
Query: 470 TPAPPIEYL----------------------TP--PDAVAAAYSNMYTTGYSATTPEYMS 505
P ++YL TP P AVAA+ TT Y T Y
Sbjct: 277 PPVASVDYLAADTSTAAAVAAAYSNLNTMYPTPYAPTAVAASTDPSLTT-YIGHTGNY-H 334
Query: 506 QSLY-----DNR---LPYENLFHQYRP---YYPEYQPYTVSNGF---SLPTYEVNK--SN 549
Q+LY DNR ENLF QYRP YYPEY T NGF SLPTYE ++
Sbjct: 335 QTLYPASALDNRYLTAATENLF-QYRPLGSYYPEYHTGTAYNGFIDVSLPTYETHQLTGK 393
Query: 550 DCDKLYCHQ 558
+KLYC Q
Sbjct: 394 TEEKLYCQQ 402
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 120/230 (52%), Gaps = 39/230 (16%)
Query: 23 YHFVLTPLNSVINLITHAI------YRP---YYPEYQPYTVSNGF---SLPTYEVNK--S 68
YH L P +++ N A YRP YYPEY T NGF SLPTYE ++
Sbjct: 333 YHQTLYPASALDNRYLTAATENLFQYRPLGSYYPEYHTGTAYNGFIDVSLPTYETHQLTG 392
Query: 69 NDCDKLYCHQTLTADQNSKGY----------SSPYITLPLCSDL---PQSHKLPSKSLNS 115
+KLYC Q + + Y SPY P+ S P + + S
Sbjct: 393 KTEEKLYCQQLGSGESPKYSYVETRHPGSVSGSPYAASPVASASTMHPATTDMNVVRAGS 452
Query: 116 K-SLDGLSSNDSS----PVPS--NHLVTPKVEDIKSESFNYSEVPRQTVLMWGSNPSRSP 168
+ SL+G +S+ +S PV S N ++TPK+ED+KSE ++ +E PRQTVLMWG+ PSR+P
Sbjct: 453 RHSLEGGASSSNSAGSSPVTSAANGMLTPKIEDVKSEVYS-NEAPRQTVLMWGAPPSRTP 511
Query: 169 P---ASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTI-GENKWKESPPV 214
P S P H + S GDPLKSLAEMN++ G+ KW+++ P
Sbjct: 512 PRNNGSYSPPTPHSTHSSTHSTNTTGDPLKSLAEMNSMNGDCKWRQTSPT 561
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 599 MWNSFLPPESAGISLQECFLQENSYLLERSFT 630
MWNSFLP ESA + L + ++ +LLERSFT
Sbjct: 1 MWNSFLPAESASLPLHDALSPQHCHLLERSFT 32
>gi|328780897|ref|XP_394737.4| PREDICTED: LOW QUALITY PROTEIN: hypothetical protein LOC411264
[Apis mellifera]
Length = 1099
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/367 (68%), Positives = 273/367 (74%), Gaps = 49/367 (13%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+KILHGQNRK EEPPLALFA+CTPFGPPSLLE+P K+VMFKSKHKLDL+LVSM
Sbjct: 463 RLDIRGRVKILHGQNRKTEEPPLALFALCTPFGPPSLLEVPQKDVMFKSKHKLDLALVSM 522
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGKMLLGYSD ELAN+GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQ DGGWQ
Sbjct: 523 DQRGKMLLGYSDAELANLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQKKDGGWQ 582
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL NSYFSDSD
Sbjct: 583 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLTNSYFSDSDS 642
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKR-KMSAQHAAPPPPT 470
LT S + P+ S T QRVNRRYKTQLRDFLSTCR KR K+SAQ + PP T
Sbjct: 643 LTGS--VMTPTL------PSQPTSQRVNRRYKTQLRDFLSTCRNKRTKLSAQSSVSPPAT 694
Query: 471 P-APPIEYL----TPPDAVAAAYSN---MYTTGY-----SATTPEYMS----------QS 507
P ++YL + AVAAAYSN MY T Y +ATT ++ Q+
Sbjct: 695 PTVASVDYLAADTSAAAAVAAAYSNLNTMYPTAYAPTAVAATTDPSLTTYIGHTGNYHQT 754
Query: 508 LY-----DNR---LPYENLFHQYRP---YYPEYQPYTVSNGFS---LPTYEVNK--SNDC 551
LY DNR ENLF QYRP YYPEY T NGF LPTYE ++ S
Sbjct: 755 LYPATALDNRYLTAATENLF-QYRPLGTYYPEYHTSTAYNGFIDVPLPTYETHQLASKAE 813
Query: 552 DKLYCHQ 558
+KLYC Q
Sbjct: 814 EKLYCQQ 820
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD + A + + Y +SDIVHQSVYELVHSEDREELQRQLMWNSFLP ESA
Sbjct: 373 CDG----EVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLMWNSFLPSESAS 428
Query: 611 ISLQECFLQENSYLLERSFT 630
+ L + ++S+LLERSFT
Sbjct: 429 LPLHDALSPQHSHLLERSFT 448
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 111/246 (45%), Gaps = 60/246 (24%)
Query: 23 YHFVLTPLNSVINLITHAI------YRP---YYPEYQPYTVSNGFS---LPTYEVNK--S 68
YH L P ++ N A YRP YYPEY T NGF LPTYE ++ S
Sbjct: 751 YHQTLYPATALDNRYLTAATENLFQYRPLGTYYPEYHTSTAYNGFIDVPLPTYETHQLAS 810
Query: 69 NDCDKLYCHQT--------LTADQNSKGYSSPYITLPLCS-------------------- 100
+KLYC Q + S SPY + P+ +
Sbjct: 811 KAEEKLYCQQLGESPKYSYVETRHASSVSGSPYASSPVAATASTAMQQQQQQQQQQQHTT 870
Query: 101 DLPQSHKLPSKSLNSKSLDGLSSNDSSPV--PSNHLVTPKVEDIKSESFNYSEVPRQTVL 158
D+ SL +S SSPV +N ++TPK+ED+K E + E PRQTVL
Sbjct: 871 DIGIVRAGSRHSLEGGPGSSSNSAGSSPVTGATNGVLTPKIEDVKPEVYG-GEAPRQTVL 929
Query: 159 MWGSNPSRSPPASPILPNG----------HINYPSQEIKKYNGDPLKSLAEMNTI-GENK 207
MWG+ P+R+PP + NG H + S GDPLKSLAEMN++ GE K
Sbjct: 930 MWGAPPARTPPRN----NGSYSPPTPHSTHSSTHSTNATGGGGDPLKSLAEMNSMNGECK 985
Query: 208 WKESPP 213
W+++ P
Sbjct: 986 WRQASP 991
>gi|242012861|ref|XP_002427145.1| aryl hydrocarbon receptor, putative [Pediculus humanus corporis]
gi|212511416|gb|EEB14407.1| aryl hydrocarbon receptor, putative [Pediculus humanus corporis]
Length = 747
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/329 (74%), Positives = 262/329 (79%), Gaps = 29/329 (8%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIKILHGQNRK EEPPLALFAICTPFGPPSLLE+P KEVMFKSKHKLDL+LVSM
Sbjct: 204 RLDIRGRIKILHGQNRKTEEPPLALFAICTPFGPPSLLEVPQKEVMFKSKHKLDLALVSM 263
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGKMLLGYSD ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT +G WQ
Sbjct: 264 DQRGKMLLGYSDAELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTQNGQWQ 323
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL+NSYFSDSDQ
Sbjct: 324 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLSNSYFSDSDQ 383
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM-SAQHAAPPPPT 470
L + SP S +++TTPQRVNRRYKTQLRDFLSTCRTKRK+ S +
Sbjct: 384 L------IGSSPNSGT--TTTTTPQRVNRRYKTQLRDFLSTCRTKRKIQSQTTPTVTTTS 435
Query: 471 PAPPIEYLTPPDAVAAAYSNMYTTGYSATTPEYMS--------QSLY--DNR-LPYENLF 519
PA +EY+ PP+ V + + +YTTGYS T+ YM SLY DNR L LF
Sbjct: 436 PATTVEYVPPPETVYSNLNPVYTTGYSDTS--YMGHTVSSNFQHSLYPVDNRFLSTGELF 493
Query: 520 HQY--RPYYPEYQ-PYTVSNGFSLPTYEV 545
HQY R YYP+Y PY NGF LP YE
Sbjct: 494 HQYATRSYYPDYSTPY---NGF-LPAYET 518
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 53/73 (72%)
Query: 558 QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECF 617
+ A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLPP+S + L E
Sbjct: 117 EVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPPDSGSMGLGEAL 176
Query: 618 LQENSYLLERSFT 630
E+ +LLERSFT
Sbjct: 177 SPEHYHLLERSFT 189
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 98/210 (46%), Gaps = 46/210 (21%)
Query: 43 RPYYPEYQ-PYTVSNGFSLPTYE--VNKSNDCDKLYCHQTLTADQNSKGYSSPYITLPLC 99
R YYP+Y PY NGF LP YE V + C L T +++GY ++ P C
Sbjct: 499 RSYYPDYSTPY---NGF-LPAYETPVLAKDPCQSL-DQSKYTTVVDARGY---VVSSPRC 550
Query: 100 ---------SDLPQSHKLPSKSLNSKSLDGLSSNDSSPVPS-NHLVTPKVEDIKSE---S 146
SD+ + + +K +S SSP + N ++TPK++D+K++
Sbjct: 551 LDSTGYVMTSDISLGKHYTTATTPAKQSPASNSAGSSPTTTTNGIITPKIDDMKTDVTGH 610
Query: 147 FNYSEVP---RQTVLMWGSNPS--RSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMN 201
+YS RQTVLMWGS S RS P L NG P + DPLKSLAEMN
Sbjct: 611 MHYSPTAAQERQTVLMWGSTGSNNRSTPNKS-LTNGTSYGPESGV-----DPLKSLAEMN 664
Query: 202 TIGEN--KWKES---------PPVVSPKSY 220
+ G+ KW+ S + SPK Y
Sbjct: 665 STGDGTCKWQSSLGKGEPISPTRIASPKRY 694
>gi|307183517|gb|EFN70296.1| Aryl hydrocarbon receptor [Camponotus floridanus]
Length = 750
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/371 (66%), Positives = 266/371 (71%), Gaps = 57/371 (15%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+K+LHGQNRK EEPPLALFA+CTPFGPPSLLE+P KEVMFKSKHKLDL+LV+M
Sbjct: 47 RLDIRGRVKVLHGQNRKTEEPPLALFALCTPFGPPSLLEVPQKEVMFKSKHKLDLALVTM 106
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGKMLLGYSD EL N+GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT DGGWQ
Sbjct: 107 DQRGKMLLGYSDAELTNLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGGWQ 166
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFV+STHRPLMEEEGRDLLGKRTMDFKVSYLDAGL NSYFSDSD
Sbjct: 167 WLQTSSRLVYKNSKPDFVLSTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLTNSYFSDSDS 226
Query: 412 LTPSHQ--TLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKR-KMSAQHAAPPP 468
LT S TL P PQR NRRYKT LRDFLSTCR+KR K+SAQ + PP
Sbjct: 227 LTGSVMTPTLPAQPA----------PQRGNRRYKTHLRDFLSTCRSKRSKLSAQSSVSPP 276
Query: 469 PTP-APPIEYL----------------------TP--PDAVAAAYSNMYTTGYSATTPEY 503
TP ++YL TP P AVAA+ TT Y T Y
Sbjct: 277 VTPTVASVDYLAADTSAAAAVAAAYSNLNTMYPTPYAPTAVAASTDPSLTT-YIGHTGNY 335
Query: 504 MSQSLY-----DNR---LPYENLFHQYRP---YYPEYQPYTVSNGF---SLPTYEVNK-- 547
Q+LY DNR ENLF QYRP YYPEY T NGF SLPTYE ++
Sbjct: 336 -HQTLYPATALDNRYLTAATENLF-QYRPLGSYYPEYHTGTTYNGFIDVSLPTYETHQLT 393
Query: 548 SNDCDKLYCHQ 558
S +KLYC Q
Sbjct: 394 SKTEEKLYCQQ 404
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 116/231 (50%), Gaps = 42/231 (18%)
Query: 23 YHFVLTPLNSVINLITHAI------YRP---YYPEYQPYTVSNGF---SLPTYEVNK--S 68
YH L P ++ N A YRP YYPEY T NGF SLPTYE ++ S
Sbjct: 335 YHQTLYPATALDNRYLTAATENLFQYRPLGSYYPEYHTGTTYNGFIDVSLPTYETHQLTS 394
Query: 69 NDCDKLYCHQTLTADQNSKGYS------------SPYITLPLCS---------DLPQSHK 107
+KLYC Q L+++++ K YS SPY P+ S D+
Sbjct: 395 KTEEKLYCQQ-LSSNESPK-YSYVETRHPGSVSGSPYAASPVASASTMHPATTDMNVVRA 452
Query: 108 LPSKSLNSKSLDGLSSNDSSPVPSNHLVTPKVEDIKSESFNYSEVPRQTVLMWGSNPSRS 167
SL S + + +N ++TPK+ED+K E ++ +E PRQTVLMWG+ PSR+
Sbjct: 453 GSRHSLEGASSSNSAGSSPVTGAANGMLTPKIEDVKPEVYS-NEAPRQTVLMWGAPPSRT 511
Query: 168 PP---ASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTI-GENKWKESPPV 214
PP S P H + S GDPLKSLAEMN++ G+ KW+++ P
Sbjct: 512 PPRNNGSYSPPTPHSTHSSTHSTNTTGDPLKSLAEMNSMNGDCKWRQTSPT 562
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 599 MWNSFLPPESAGISLQECFLQENSYLLERSFT 630
MWNSFLP ESA + L + ++ +LLERSFT
Sbjct: 1 MWNSFLPAESASLPLHDALSPQHCHLLERSFT 32
>gi|91091736|ref|XP_967876.1| PREDICTED: similar to spineless CG6993-PA [Tribolium castaneum]
gi|270001263|gb|EEZ97710.1| spineless [Tribolium castaneum]
Length = 624
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/322 (71%), Positives = 246/322 (76%), Gaps = 28/322 (8%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+K+LHGQNRK +E PLALFAICTPFGPPSLLEIP KEVMFKSKHKLDL+LVSM
Sbjct: 199 RLDIRGRVKVLHGQNRKSDEAPLALFAICTPFGPPSLLEIPQKEVMFKSKHKLDLALVSM 258
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGKMLLGYSD+ELA MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT DG WQ
Sbjct: 259 DQRGKMLLGYSDSELATMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGQWQ 318
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL NSYFS+SD
Sbjct: 319 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLPNSYFSESDL 378
Query: 412 L-TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPT 470
L TP+ Q + TP RVNRRYKTQLRDFLSTCRTKRK+S PP
Sbjct: 379 LSTPTAQ------------QHNLTPSRVNRRYKTQLRDFLSTCRTKRKLSNSGQVTPPTN 426
Query: 471 PAPPIEYLTP-PDAVAAAYSNMYTTGYSATTPE--YMSQSLY------DNRLPY--ENLF 519
+P PD +A Y NMY+T Y TP+ YM S + DNR +NLF
Sbjct: 427 TTVTASVSSPLPDYIAPDY-NMYSTSYPTPTPDLSYMPHSNFYPTTPLDNRYLTTPDNLF 485
Query: 520 HQYRP---YYPEYQPYTVSNGF 538
HQYRP YYP+Y NGF
Sbjct: 486 HQYRPLGTYYPDYHSTPSYNGF 507
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + +GY +SDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA +
Sbjct: 107 LTCEGEVFFATHSIEGYLGFHQSDIVHQSVYELVHSEDREELQRQLMWNSFLPPESANMG 166
Query: 613 LQECFLQENSYLLERSFT 630
LQ+ L EN +LLERSFT
Sbjct: 167 LQDVLLPENCHLLERSFT 184
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 137 PKVEDIKSESFNY-SEVPRQTVLMWGSNPSRSPPASPILPN 176
PK+E K E Y E PRQTVLMWGSNP + S L N
Sbjct: 552 PKIEAPKMEEREYVGEAPRQTVLMWGSNPPTTSDESSELTN 592
>gi|197108534|gb|ACH42695.1| spineless [Tribolium castaneum]
Length = 582
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/322 (71%), Positives = 246/322 (76%), Gaps = 28/322 (8%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+K+LHGQNRK +E PLALFAICTPFGPPSLLEIP KEVMFKSKHKLDL+LVSM
Sbjct: 216 RLDIRGRVKVLHGQNRKSDEAPLALFAICTPFGPPSLLEIPQKEVMFKSKHKLDLALVSM 275
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGKMLLGYSD+ELA MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT DG WQ
Sbjct: 276 DQRGKMLLGYSDSELATMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGQWQ 335
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL NSYFS+SD
Sbjct: 336 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLPNSYFSESDL 395
Query: 412 L-TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPT 470
L TP+ Q + TP RVNRRYKTQLRDFLSTCRTKRK+S PP
Sbjct: 396 LSTPTAQ------------QHNLTPSRVNRRYKTQLRDFLSTCRTKRKLSNSGQVTPPTN 443
Query: 471 PAPPIEYLTP-PDAVAAAYSNMYTTGYSATTPE--YMSQSLY------DNRLPY--ENLF 519
+P PD +A Y NMY+T Y TP+ YM S + DNR +NLF
Sbjct: 444 TTVTASVSSPLPDYIAPDY-NMYSTSYPTPTPDLSYMPHSNFYPTTPLDNRYLTTPDNLF 502
Query: 520 HQYRP---YYPEYQPYTVSNGF 538
HQYRP YYP+Y NGF
Sbjct: 503 HQYRPLGTYYPDYHSTPSYNGF 524
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + +GY +SDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA +
Sbjct: 124 LTCEGEVFFATHSIEGYLGFHQSDIVHQSVYELVHSEDREELQRQLMWNSFLPPESANMG 183
Query: 613 LQECFLQENSYLLERSFT 630
LQ+ L EN +LLERSFT
Sbjct: 184 LQDVLLPENCHLLERSFT 201
>gi|345486455|ref|XP_001607569.2| PREDICTED: hypothetical protein LOC100123827 [Nasonia vitripennis]
Length = 903
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 245/394 (62%), Positives = 263/394 (66%), Gaps = 81/394 (20%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+KILHGQNRK EEPPLALFA+CTPFGPPSLLE+P KEVMFKSKHKLDL+LVSM
Sbjct: 223 RLDIRGRVKILHGQNRKTEEPPLALFALCTPFGPPSLLEVPQKEVMFKSKHKLDLALVSM 282
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGKMLLGYSD+ELAN+GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT D GWQ
Sbjct: 283 DQRGKMLLGYSDSELANLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDAGWQ 342
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL NSYFSDSD
Sbjct: 343 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLTNSYFSDSDS 402
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKR--KMSAQHAAPPP- 468
L + + S+ + PQRVNRRYKTQLRDFLSTCR+KR K++AQ + P
Sbjct: 403 LGGTGSCIGSQI------STQSQPQRVNRRYKTQLRDFLSTCRSKRTSKLAAQLSPLSPA 456
Query: 469 -----PTPA---------PPIEYL-----------TPPDAVAAAYSNMYT---------- 493
PT A P++YL AAAY N+ +
Sbjct: 457 TMGGTPTAASTASVGMGVAPVDYLGAAAVADSSAAAAAVVAAAAYGNLNSMYPGASYAPT 516
Query: 494 ----------TGYSATTPEYMSQSLY-----DNR--LPYENLFHQYRP---YYPEYQPYT 533
T Y T Y Q LY DNR ENLF QYRP YYPEY T
Sbjct: 517 AAAAGPEPALTSYIGHTGGYHHQGLYSPATLDNRYLTATENLF-QYRPLGSYYPEYHATT 575
Query: 534 VSNGF----SL-PTYEVNKSNDCDKLYCHQTLTA 562
NGF SL PTYE HQ LTA
Sbjct: 576 GYNGFIDAVSLPPTYE-----------SHQQLTA 598
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD + A + + Y +SDIVHQSVYELVHSEDREELQRQLMWNSFLP ESA
Sbjct: 133 CDG----EVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLMWNSFLPAESAS 188
Query: 611 ISLQECFLQENSYLLERSFT 630
++L E + +LLERSFT
Sbjct: 189 LALHETLTPQYGHLLERSFT 208
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 100/217 (46%), Gaps = 55/217 (25%)
Query: 42 YRP---YYPEYQPYTVSNGF----SLP-TYEVNKSNDCDKLYCHQTLTA---DQNSKGYS 90
YRP YYPEY T NGF SLP TYE HQ LTA D GY+
Sbjct: 561 YRPLGSYYPEYHATTGYNGFIDAVSLPPTYE-----------SHQQLTATAADSPKYGYA 609
Query: 91 SPYITLPLCSDLPQSHKLPSKSLNSKSLDGLSSND---------------SSPVPSNH-- 133
T P S + P+ ++++ ++ G + SSPV ++
Sbjct: 610 DVRNTAGYALSSPHSSE-PNLAVSAATISGSRAGSRHSLEAASVSSNSAGSSPVTNSSNN 668
Query: 134 -----LVTPKVEDIKSESFNYSEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQE--- 185
++TPK+ED+K + +N RQTVLMWG+ PS P P NG + P+
Sbjct: 669 NNNNGMLTPKLEDVKPDVYNSETGLRQTVLMWGAPPSSRTP--PTRSNGSYSPPTPNQLE 726
Query: 186 ----IKKYNGDPLKSLAEMNTI-GENKWKESPPVVSP 217
+ DPLKSL EMN+I GE KWK S PV +P
Sbjct: 727 RVILLVSARSDPLKSLQEMNSINGECKWKRSSPVDAP 763
>gi|157130624|ref|XP_001661947.1| aryl hydrocarbon receptor [Aedes aegypti]
gi|108871838|gb|EAT36063.1| AAEL011825-PB [Aedes aegypti]
Length = 753
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 250/325 (76%), Gaps = 25/325 (7%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+KILHGQNRK+EEPPLALFA CTPFGPPSLLEIP KE MFKSKHKLD +LVSM
Sbjct: 225 RLDIRGRVKILHGQNRKVEEPPLALFAFCTPFGPPSLLEIPQKENMFKSKHKLDFTLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQ+GKM LGYSD+ELANMGGYDLVH+DDLAYVASAHQELLKTGASGMIAYR+Q +G WQ
Sbjct: 285 DQKGKMTLGYSDSELANMGGYDLVHFDDLAYVASAHQELLKTGASGMIAYRYQKKNGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDF+I THR LMEEEGRDLLGKRTMDFKVSYLD GL ++YF+D+DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFIICTHRQLMEEEGRDLLGKRTMDFKVSYLDTGLTSTYFTDADQ 404
Query: 412 L--TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPP 469
L TPS SP +A + S+T QR NRRYKTQLRDFLSTCR+KRK+ Q
Sbjct: 405 LIVTPS-----GSPTAATTSPVSST-QRYNRRYKTQLRDFLSTCRSKRKLQ-QSPGGQVA 457
Query: 470 TPAPPIEYLTPPD-AVAAAYSN---MYTTG-YSATTPEYMSQSLYDNRL--PYENLFHQY 522
+P +EY+ P AVAAAYSN MYTT Y +T YM+ + + +N+FHQY
Sbjct: 458 SPVQMVEYVNDPAVAVAAAYSNLNPMYTTSPYVSTESMYMTPPAHSSNFYSVSDNIFHQY 517
Query: 523 R-----PYYPEY----QPYTVSNGF 538
R Y+PEY PY +NGF
Sbjct: 518 RLQGVGGYFPEYASTPAPYITNNGF 542
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + Y +SDIVHQSVYELVHSEDREELQRQL+WN+FLP + +G+
Sbjct: 133 LTCEGEVFFATHTIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNTFLPADLSGLQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L + + E S LLERSFT
Sbjct: 193 LTDALVPEKSTLLERSFT 210
>gi|157130620|ref|XP_001661945.1| aryl hydrocarbon receptor [Aedes aegypti]
gi|108871836|gb|EAT36061.1| AAEL011825-PC [Aedes aegypti]
Length = 690
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 250/325 (76%), Gaps = 25/325 (7%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+KILHGQNRK+EEPPLALFA CTPFGPPSLLEIP KE MFKSKHKLD +LVSM
Sbjct: 225 RLDIRGRVKILHGQNRKVEEPPLALFAFCTPFGPPSLLEIPQKENMFKSKHKLDFTLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQ+GKM LGYSD+ELANMGGYDLVH+DDLAYVASAHQELLKTGASGMIAYR+Q +G WQ
Sbjct: 285 DQKGKMTLGYSDSELANMGGYDLVHFDDLAYVASAHQELLKTGASGMIAYRYQKKNGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDF+I THR LMEEEGRDLLGKRTMDFKVSYLD GL ++YF+D+DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFIICTHRQLMEEEGRDLLGKRTMDFKVSYLDTGLTSTYFTDADQ 404
Query: 412 L--TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPP 469
L TPS SP +A + S+T QR NRRYKTQLRDFLSTCR+KRK+ Q
Sbjct: 405 LIVTPSG-----SPTAATTSPVSST-QRYNRRYKTQLRDFLSTCRSKRKLQ-QSPGGQVA 457
Query: 470 TPAPPIEYLTPPD-AVAAAYSN---MYTTG-YSATTPEYMSQSLYDNRL--PYENLFHQY 522
+P +EY+ P AVAAAYSN MYTT Y +T YM+ + + +N+FHQY
Sbjct: 458 SPVQMVEYVNDPAVAVAAAYSNLNPMYTTSPYVSTESMYMTPPAHSSNFYSVSDNIFHQY 517
Query: 523 R-----PYYPEY----QPYTVSNGF 538
R Y+PEY PY +NGF
Sbjct: 518 RLQGVGGYFPEYASTPAPYITNNGF 542
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + Y +SDIVHQSVYELVHSEDREELQRQL+WN+FLP + +G+
Sbjct: 133 LTCEGEVFFATHTIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNTFLPADLSGLQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L + + E S LLERSFT
Sbjct: 193 LTDALVPEKSTLLERSFT 210
>gi|157130622|ref|XP_001661946.1| aryl hydrocarbon receptor [Aedes aegypti]
gi|108871837|gb|EAT36062.1| AAEL011825-PA [Aedes aegypti]
Length = 536
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 245/318 (77%), Gaps = 21/318 (6%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+KILHGQNRK+EEPPLALFA CTPFGPPSLLEIP KE MFKSKHKLD +LVSM
Sbjct: 225 RLDIRGRVKILHGQNRKVEEPPLALFAFCTPFGPPSLLEIPQKENMFKSKHKLDFTLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQ+GKM LGYSD+ELANMGGYDLVH+DDLAYVASAHQELLKTGASGMIAYR+Q +G WQ
Sbjct: 285 DQKGKMTLGYSDSELANMGGYDLVHFDDLAYVASAHQELLKTGASGMIAYRYQKKNGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDF+I THR LMEEEGRDLLGKRTMDFKVSYLD GL ++YF+D+DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFIICTHRQLMEEEGRDLLGKRTMDFKVSYLDTGLTSTYFTDADQ 404
Query: 412 L--TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPP 469
L TPS SP +A + S+T QR NRRYKTQLRDFLSTCR+KRK+ Q
Sbjct: 405 LIVTPS-----GSPTAATTSPVSST-QRYNRRYKTQLRDFLSTCRSKRKLQ-QSPGGQVA 457
Query: 470 TPAPPIEYLTPPD-AVAAAYSN---MYTTG-YSATTPEYMSQSLYDNRL--PYENLFHQY 522
+P +EY+ P AVAAAYSN MYTT Y +T YM+ + + +N+FHQY
Sbjct: 458 SPVQMVEYVNDPAVAVAAAYSNLNPMYTTSPYVSTESMYMTPPAHSSNFYSVSDNIFHQY 517
Query: 523 R-----PYYPEYQPYTVS 535
R Y+PE T +
Sbjct: 518 RLQGVGGYFPEILAKTTT 535
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + Y +SDIVHQSVYELVHSEDREELQRQL+WN+FLP + +G+
Sbjct: 133 LTCEGEVFFATHTIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNTFLPADLSGLQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L + + E S LLERSFT
Sbjct: 193 LTDALVPEKSTLLERSFT 210
>gi|328724874|ref|XP_001946523.2| PREDICTED: hypothetical protein LOC100167590 [Acyrthosiphon pisum]
Length = 978
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/366 (61%), Positives = 249/366 (68%), Gaps = 55/366 (15%)
Query: 232 RLDIRGRIKILHGQNRKLEEPP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVS 290
RLD+RGRIK++HGQNRK +EPP L LFA+CTPFGPPSLLEIPHKEVMFKSKHKLDLSLVS
Sbjct: 241 RLDVRGRIKVIHGQNRKSDEPPPLGLFALCTPFGPPSLLEIPHKEVMFKSKHKLDLSLVS 300
Query: 291 MDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGW 350
MDQRGK+LLGY D+ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR QT G W
Sbjct: 301 MDQRGKLLLGYCDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRVQTKPGTW 360
Query: 351 QWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSD 410
QWLQTSSRLVYKNSKPDFVI THRPLMEEEGRDLLGKRTMDFKVSYLDAGL NSYFSDS+
Sbjct: 361 QWLQTSSRLVYKNSKPDFVIGTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLTNSYFSDSE 420
Query: 411 QLTPS----HQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAP 466
QL+ S + + + T P + RRYKT LRDFLSTCRTKRK+SA A P
Sbjct: 421 QLSGSLTTSTTAASTAGSGTTGSAGQTQPSQPRRRYKTHLRDFLSTCRTKRKLSASTATP 480
Query: 467 PPPTPAP-PIEY----------LTPPDAVAAAYSNMYTTGYSATTP-------------- 501
P A +EY PP Y+N+ T + P
Sbjct: 481 APTVAATVAVEYPAAVQAPSLPSVPPPTADVLYTNLNTAALYSAGPYNGAVVADNGGYHQ 540
Query: 502 EYMSQSLYDNRLPY----ENLFHQYRP---YYPEYQ-----PYTVSNGF----------- 538
Q+LYD R+PY +NLF QYRP YY EY PY + NGF
Sbjct: 541 SNFHQTLYDTRIPYLTATDNLF-QYRPLGNYYTEYHNPATTPY-MGNGFLDISPRGPVQC 598
Query: 539 SLPTYE 544
LPTY+
Sbjct: 599 GLPTYD 604
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPE--- 607
CD + A + Y +SDIVHQSVYELVHSEDREELQRQLMWNS +P E
Sbjct: 147 CDG----EVFFATHTIENYLGFHQSDIVHQSVYELVHSEDREELQRQLMWNSAIPTEPGS 202
Query: 608 -SAGISLQECFLQENSYLLERSFT 630
S I+L E +N LL+RSFT
Sbjct: 203 PSPSITLHEALHPDNGRLLQRSFT 226
>gi|195037953|ref|XP_001990425.1| GH18248 [Drosophila grimshawi]
gi|193894621|gb|EDV93487.1| GH18248 [Drosophila grimshawi]
Length = 1082
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/349 (65%), Positives = 254/349 (72%), Gaps = 46/349 (13%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIKILHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKILHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+DTEL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADTELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 LT--PSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMS--------- 460
L P+ +++P +A + TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 405 LVVPPTSASVSP---TAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQQQQQQQ 461
Query: 461 -----AQHAAPPPP--TPAPP-IEYL-TPPDAVAAAYSN---MYTTGYSATTPE--YMSQ 506
AQ ++P +PAP +EYL P AVAAAYSN MYTT AT + YM
Sbjct: 462 QQQLHAQQSSPLAQVGSPAPAVVEYLPDPAAAVAAAYSNLNPMYTTSPYATAADNLYMGS 521
Query: 507 SLYDNRL--PYENLFHQYR--------PYYPEYQPYT-------VSNGF 538
S+ N ENLFHQYR YY +Y P+T V+NGF
Sbjct: 522 SMPANAFYPVSENLFHQYRLQGAVGVGGYYTDY-PHTGAPASAYVANGF 569
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LSETLAPDKALYLERSFT 210
>gi|195389004|ref|XP_002053168.1| GJ23490 [Drosophila virilis]
gi|194151254|gb|EDW66688.1| GJ23490 [Drosophila virilis]
Length = 1099
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/350 (64%), Positives = 249/350 (71%), Gaps = 51/350 (14%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIKILHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKILHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 LT--PSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMS--------- 460
L P+ +++P +A + TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 405 LVVPPTSASVSP---TAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQQQQQQQ 461
Query: 461 ---------AQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTGYSATTPE--YMS 505
AQ +P P +EYL P AVAAAYSN MYTT AT + YM
Sbjct: 462 LQAQQSSPLAQVGSPAPAV----VEYLPDPAAAVAAAYSNLNPMYTTSPYATAADNLYMG 517
Query: 506 QSLYDNRL--PYENLFHQYR--------PYYPEYQPYT-------VSNGF 538
S+ N ENLFHQYR YY +Y P+T V+NGF
Sbjct: 518 SSMPANAFYPVSENLFHQYRLQGAVGVGGYYTDY-PHTGGPASAYVANGF 566
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LSETLAPDKALYLERSFT 210
>gi|357613177|gb|EHJ68357.1| hypothetical protein KGM_16693 [Danaus plexippus]
Length = 513
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 242/324 (74%), Gaps = 37/324 (11%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQN+K EEPPLALFAIC PFGPPSLLEIP KEVMFKSKHKLDLSLVSM
Sbjct: 129 RLDIRGRIKVLHGQNKKTEEPPLALFAICAPFGPPSLLEIPQKEVMFKSKHKLDLSLVSM 188
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK+LLGY+D EL+NMGGYDLVHY+DLAYVASAHQELLKTGASGMIAYRFQT DG WQ
Sbjct: 189 DQRGKLLLGYTDGELSNMGGYDLVHYEDLAYVASAHQELLKTGASGMIAYRFQTKDGLWQ 248
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL GKRTMDFKVSYLD GL + YFS+++Q
Sbjct: 249 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLHGKRTMDFKVSYLDTGLTSLYFSETEQ 308
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPTP 471
L+ T+ TTP R RRYKTQLRDFLSTCR KR++ A
Sbjct: 309 LSGCESTV-------------TTPPRAARRYKTQLRDFLSTCRNKRRVPTTPA------- 348
Query: 472 APPIEYLTPPDAVAAAYSNM---YTTGYS----ATTPEYMSQSLYDNRLPYENLFHQYRP 524
PP+EYL VAAAY+N+ YT Y A T Y L D+R +N+FHQY+P
Sbjct: 349 PPPVEYLAA--DVAAAYTNLNGTYTAPYGEYPPAPTLHYAPPPL-DDRFLSDNIFHQYKP 405
Query: 525 --YYPEYQPYTVSNGFSLPT-YEV 545
Y+ Y P NGF P YEV
Sbjct: 406 LSYHYTYPP----NGFLEPAPYEV 425
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 55/73 (75%)
Query: 558 QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECF 617
+ A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLPPE+ ++LQ+
Sbjct: 42 EVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPPEANTLTLQDVL 101
Query: 618 LQENSYLLERSFT 630
E +++LERSFT
Sbjct: 102 RSERAHMLERSFT 114
>gi|386765904|ref|NP_001247140.1| spineless, isoform C [Drosophila melanogaster]
gi|386765906|ref|NP_001163629.2| spineless, isoform D [Drosophila melanogaster]
gi|383292749|gb|AFH06458.1| spineless, isoform C [Drosophila melanogaster]
gi|383292750|gb|ACZ94925.2| spineless, isoform D [Drosophila melanogaster]
Length = 1015
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/339 (66%), Positives = 244/339 (71%), Gaps = 37/339 (10%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM-----------S 460
L T SP +A + TP R NRRYKTQLRDFLSTCR+KRK+ S
Sbjct: 405 LVVPPST---SP-TAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQNQPQTQQTS 460
Query: 461 AQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQSLYDNRL- 513
P PA +EYL P AVAAAYSN MYTT SA YM S+ N
Sbjct: 461 PLGGQVGSPAPAVAVEYLPDPAAAVAAAYSNLNPMYTTSPYASAADNLYMGSSMPANAFY 520
Query: 514 -PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
ENLFHQYR YY +Y P++ V+NGF
Sbjct: 521 PVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 558
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LAETLAPDKALYLERSFT 210
>gi|194901278|ref|XP_001980179.1| GG19993 [Drosophila erecta]
gi|190651882|gb|EDV49137.1| GG19993 [Drosophila erecta]
Length = 1057
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/346 (64%), Positives = 243/346 (70%), Gaps = 50/346 (14%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 L------TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM------ 459
L +P+ L P TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 405 LVVPPSTSPTAHALPP----------PVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQNQ 454
Query: 460 ------SAQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQS 507
S P PA +EYL P AVAAAYSN MYTT SA YM S
Sbjct: 455 PQTQQTSPLGGQVGSPAPAVAVEYLPDPAAAVAAAYSNLNPMYTTSPYASAADNLYMGSS 514
Query: 508 LYDNRL--PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
+ N ENLFHQYR YY +Y P++ V+NGF
Sbjct: 515 MPANAFYPVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 559
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LAETLAPDKALYLERSFT 210
>gi|195500996|ref|XP_002097612.1| GE26316 [Drosophila yakuba]
gi|194183713|gb|EDW97324.1| GE26316 [Drosophila yakuba]
Length = 1062
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/346 (64%), Positives = 243/346 (70%), Gaps = 50/346 (14%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 L------TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM------ 459
L +P+ L P TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 405 LVVPPSTSPTSHALPP----------PVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQNQ 454
Query: 460 ------SAQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQS 507
S P PA +EYL P AVAAAYSN MYTT SA YM S
Sbjct: 455 PQTQQTSPLGGQVGSPAPAVAVEYLPDPAAAVAAAYSNLNPMYTTSPYASAADNLYMGSS 514
Query: 508 LYDNRL--PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
+ N ENLFHQYR YY +Y P++ V+NGF
Sbjct: 515 MPANAFYPVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 559
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LAETLAPDKALYLERSFT 210
>gi|17136514|ref|NP_476748.1| spineless, isoform A [Drosophila melanogaster]
gi|7300141|gb|AAF55308.1| spineless, isoform A [Drosophila melanogaster]
Length = 884
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/339 (66%), Positives = 244/339 (71%), Gaps = 37/339 (10%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM-----------S 460
L T SP +A + TP R NRRYKTQLRDFLSTCR+KRK+ S
Sbjct: 405 LVVPPST---SP-TAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQNQPQTQQTS 460
Query: 461 AQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQSLYDNRL- 513
P PA +EYL P AVAAAYSN MYTT SA YM S+ N
Sbjct: 461 PLGGQVGSPAPAVAVEYLPDPAAAVAAAYSNLNPMYTTSPYASAADNLYMGSSMPANAFY 520
Query: 514 -PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
ENLFHQYR YY +Y P++ V+NGF
Sbjct: 521 PVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 558
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LAETLAPDKALYLERSFT 210
>gi|390178922|ref|XP_003736760.1| GA20013, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859640|gb|EIM52833.1| GA20013, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 1142
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/346 (65%), Positives = 242/346 (69%), Gaps = 50/346 (14%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIKILHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 215 RLDIRGRIKILHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 274
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 275 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 334
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFSD+DQ
Sbjct: 335 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSDADQ 394
Query: 412 L------TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM------ 459
L +P+ L P TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 395 LVVPPSASPTAHALPP----------PVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQQQ 444
Query: 460 ------SAQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQS 507
S P PA +EYL P AVAAAYSN MYT SA YM S
Sbjct: 445 QQNQQTSPLGGQVGSPAPAVAVEYLPDPAVAVAAAYSNLNPMYTASPYGSAADNLYMGSS 504
Query: 508 LYDNRL--PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
+ N ENLFHQYR YY +Y P++ V+NGF
Sbjct: 505 MPANAFYPVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 549
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 123 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 182
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 183 LSETLAPDKALYLERSFT 200
>gi|3132524|gb|AAD09205.1| Ahr homolog spineless [Drosophila melanogaster]
Length = 884
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/339 (66%), Positives = 244/339 (71%), Gaps = 37/339 (10%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM-----------S 460
L T SP +A + TP R NRRYKTQLRDFLSTCR+KRK+ S
Sbjct: 405 LVVPPST---SP-TAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQNQPQTQQTS 460
Query: 461 AQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQSLYDNRL- 513
P PA +EYL P AVAAAYSN MYTT SA YM S+ N
Sbjct: 461 PLGGQVGSPAPAVAVEYLPDPAAAVAAAYSNLNPMYTTSPYASAADNLYMGSSMPANAFY 520
Query: 514 -PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
ENLFHQYR YY +Y P++ V+NGF
Sbjct: 521 PVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 558
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFYATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LAETLAPDKALYLERSFT 210
>gi|195349386|ref|XP_002041226.1| GM15436 [Drosophila sechellia]
gi|194122831|gb|EDW44874.1| GM15436 [Drosophila sechellia]
Length = 1077
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/340 (66%), Positives = 244/340 (71%), Gaps = 38/340 (11%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 252 RLDIRGRIKVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 311
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 312 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 371
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 372 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 431
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM------------ 459
L T SP +A + TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 432 LVVPPST---SP-TAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQNQPQTQQT 487
Query: 460 SAQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQSLYDNRL 513
S P PA +EYL P AVAAAYSN MYTT SA YM S+ N
Sbjct: 488 SPLGGQVGSPAPAVAVEYLPDPAAAVAAAYSNLNPMYTTSPYASAADNLYMGSSMPANAF 547
Query: 514 --PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
ENLFHQYR YY +Y P++ V+NGF
Sbjct: 548 YPVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 586
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 160 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 219
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 220 LAETLAPDKALYLERSFT 237
>gi|390178920|ref|XP_001359453.3| GA20013, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859639|gb|EAL28599.3| GA20013, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 878
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/341 (65%), Positives = 243/341 (71%), Gaps = 40/341 (11%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIKILHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 185 RLDIRGRIKILHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 244
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 245 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 304
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFSD+DQ
Sbjct: 305 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSDADQ 364
Query: 412 LTPSHQTLAPSPG-SAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM----------- 459
L + PS +A + TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 365 L-----VVPPSASPTAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQQQQQNQQ 419
Query: 460 -SAQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQSLYDNR 512
S P PA +EYL P AVAAAYSN MYT SA YM S+ N
Sbjct: 420 TSPLGGQVGSPAPAVAVEYLPDPAVAVAAAYSNLNPMYTASPYGSAADNLYMGSSMPANA 479
Query: 513 L--PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
ENLFHQYR YY +Y P++ V+NGF
Sbjct: 480 FYPVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 519
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 45/58 (77%)
Query: 573 FESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSYLLERSFT 630
+SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + + L E + + LERSFT
Sbjct: 113 LQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQLSETLAPDKALYLERSFT 170
>gi|194744809|ref|XP_001954885.1| GF16518 [Drosophila ananassae]
gi|190627922|gb|EDV43446.1| GF16518 [Drosophila ananassae]
Length = 1071
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/346 (64%), Positives = 243/346 (70%), Gaps = 50/346 (14%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 250 RLDIRGRIKVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 309
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 310 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 369
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 370 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 429
Query: 412 L------TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAA 465
L +P+ L P TP R NRRYKTQLRDFLSTCR+KRK+ Q
Sbjct: 430 LVVPPSASPTAHALPP----------PVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQQQ 479
Query: 466 PP------------PPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQS 507
P+PA +EYL P AVAAAYSN MYT SA YM S
Sbjct: 480 QQSQQTSPLGGPVGSPSPAVAVEYLPDPAAAVAAAYSNLNPMYTASPYASAADNLYMGSS 539
Query: 508 LYDNRL--PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
+ N ENLFHQYR YY +Y P++ V+NGF
Sbjct: 540 MPANAFYPVSENLFHQYRLQGAVGGYYTDY-PHSGGPASAYVANGF 584
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 158 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 217
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 218 LAETLAPDKALYLERSFT 235
>gi|195570392|ref|XP_002103191.1| GD20292 [Drosophila simulans]
gi|194199118|gb|EDX12694.1| GD20292 [Drosophila simulans]
Length = 1075
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/340 (66%), Positives = 244/340 (71%), Gaps = 38/340 (11%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 254 RLDIRGRIKVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 313
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 314 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 373
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 374 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 433
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM------------ 459
L T SP +A + TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 434 LVVPPST---SP-TAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQNQPQTQQT 489
Query: 460 SAQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMSQSLYDNRL 513
S P PA +EYL P AVAAAYSN MYTT SA YM S+ N
Sbjct: 490 SPLGGQVGSPAPAVAVEYLPDPAAAVAAAYSNLNPMYTTSPYASAADNLYMGSSMPANAF 549
Query: 514 --PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
ENLFHQYR YY +Y P++ V+NGF
Sbjct: 550 YPVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 588
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 162 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 221
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 222 LAETLAPDKALYLERSFT 239
>gi|195152766|ref|XP_002017307.1| GL22243 [Drosophila persimilis]
gi|194112364|gb|EDW34407.1| GL22243 [Drosophila persimilis]
Length = 1100
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/348 (64%), Positives = 242/348 (69%), Gaps = 52/348 (14%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIKILHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKILHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 L------TPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM------ 459
L +P+ L P TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 405 LVVPPSASPTAHALPP----------PVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQQQ 454
Query: 460 --------SAQHAAPPPPTPAPPIEYL-TPPDAVAAAYSN---MYTTG--YSATTPEYMS 505
S P PA +EYL P AVAAAYSN MYT SA YM
Sbjct: 455 QQQQNQQTSPLGGQVGSPAPAVAVEYLPDPAVAVAAAYSNLNPMYTASPYGSAADNLYMG 514
Query: 506 QSLYDNRL--PYENLFHQYR------PYYPEYQPYT-------VSNGF 538
S+ N ENLFHQYR YY +Y P++ V+NGF
Sbjct: 515 SSMPANAFYPVSENLFHQYRLQGAVGGYYTDY-PHSGAPASAYVANGF 561
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LSETLAPDKALYLERSFT 210
>gi|195451109|ref|XP_002072771.1| GK13504 [Drosophila willistoni]
gi|194168856|gb|EDW83757.1| GK13504 [Drosophila willistoni]
Length = 1031
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/352 (64%), Positives = 244/352 (69%), Gaps = 50/352 (14%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIKILHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKILHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 LTPSHQTLAPSPG-SAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM----------- 459
L + PS +A S TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 405 L-----VVPPSASPTAHSLPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQQQQQQQQQ 459
Query: 460 ---------SAQHAAPPPPTPAPP-IEYL-TPPDAVAAAYSN---MYTTG--YSATTPEY 503
S+ A +PAP +EYL P AVAAAYSN MYTT SA Y
Sbjct: 460 QLQQQAGQQSSPLAGQLVGSPAPAVVEYLPDPAVAVAAAYSNLNPMYTTSPYASAADNLY 519
Query: 504 MS--QSLYDNRL--PYENLFHQYR------PYYPEY-------QPYTVSNGF 538
M S+ N ENLFHQYR YY +Y Y +NGF
Sbjct: 520 MGSCSSMPANAFYPVSENLFHQYRLQGAVGGYYTDYPHSGPPASAYVAANGF 571
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LSETLAPDKALYLERSFT 210
>gi|109689224|dbj|BAE96766.1| arylhydrocarbon receptor homolog a isoform [Anopheles stephensi]
Length = 981
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/335 (65%), Positives = 243/335 (72%), Gaps = 32/335 (9%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+KILHGQN+K EEPPLALFA CTPFGPPSLLEIP KE MFKSKHKLD SLVSM
Sbjct: 228 RLDIRGRVKILHGQNKKNEEPPLALFAFCTPFGPPSLLEIPPKENMFKSKHKLDFSLVSM 287
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
D +GK LGYSD+ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 288 DHKGKNTLGYSDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGAWQ 347
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LMEEEGRDLLGK TMDFKVSYLDAG++++YF +SDQ
Sbjct: 348 WLQTSSRLVYKNSKPDFVICTHRQLMEEEGRDLLGKCTMDFKVSYLDAGISSTYF-ESDQ 406
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPTP 471
L + S S+ S +T QR NRRYKTQLRDFLSTCR KRKM Q AA
Sbjct: 407 L------IVSSNNSSAPSSPTTFQQRANRRYKTQLRDFLSTCRHKRKMPNQCAAEQVSPS 460
Query: 472 APPIEYL--TPPDA-------VAAAYSNMYTTGYS------ATTPE--YMSQSLYD-NRL 513
++Y+ PP AAAYSN + YS T P+ YM+ ++ N
Sbjct: 461 VAVVDYIPGGPPGTAAAAAAVAAAAYSNSINSVYSPAAHFPGTGPDNVYMAGPVHSTNFY 520
Query: 514 PY-ENLFHQYR-----PYYPEYQPYTVSNGFSLPT 542
P +NLFHQYR YYPEY T ++ F +PT
Sbjct: 521 PMPDNLFHQYRLQGVSGYYPEYHTSTSASTF-VPT 554
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 47/57 (82%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSYLLERSFT 630
+SDI+HQSVYELVHSEDREELQ+QL+WNSFLP + +GI L E + E LLERSFT
Sbjct: 157 QSDIIHQSVYELVHSEDREELQKQLLWNSFLPADLSGIQLSEALVPEKDKLLERSFT 213
>gi|158299340|ref|XP_001238158.2| AGAP010259-PA [Anopheles gambiae str. PEST]
gi|157014317|gb|EAU76143.2| AGAP010259-PA [Anopheles gambiae str. PEST]
Length = 955
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/377 (59%), Positives = 261/377 (69%), Gaps = 32/377 (8%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+KILHGQN+K EEPPLALFA CTPFGPPSLLEIP KE MFKSKHKLD SLVSM
Sbjct: 228 RLDIRGRVKILHGQNKKNEEPPLALFAFCTPFGPPSLLEIPPKENMFKSKHKLDFSLVSM 287
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
D +GK LGYSD+ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 288 DHKGKNTLGYSDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGAWQ 347
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LMEEEGRDLLGKRTMDFKVSYLDAG++++YF +S+Q
Sbjct: 348 WLQTSSRLVYKNSKPDFVICTHRQLMEEEGRDLLGKRTMDFKVSYLDAGISSTYF-ESEQ 406
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPTP 471
L ++ S S+ S +T+ QR NRRYKTQLRDFLSTCR KRK+ Q AA
Sbjct: 407 L-----SIVSSNNSSAPSSPTTSQQRANRRYKTQLRDFLSTCRHKRKLPNQCAAEQVSPS 461
Query: 472 APPIEYL--TPPDA-------VAAAYSNMYTTGYS------ATTPE--YMSQSLY-DNRL 513
++Y+ PP AAAYSN + YS T P+ YM+ ++ N
Sbjct: 462 VSVVDYIPGGPPGTAAAAAAVAAAAYSNSINSVYSPAAHFPGTAPDNVYMTGPVHSSNFY 521
Query: 514 PY-ENLFHQYR-----PYYPEYQPYTVSNGFSLPTYEVNKSNDCDKLYCHQTLTADQNSK 567
P +NLFHQYR YYPEY T ++ F +PT + D + T+ + +K
Sbjct: 522 PMPDNLFHQYRLQGVSGYYPEYHTSTSASTF-VPTNGL-IPYDSYGITKEDTMRWHEGTK 579
Query: 568 GYSSPFESDIVHQSVYE 584
Y P ES H + E
Sbjct: 580 SYGPPGESGQSHPASAE 596
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 47/57 (82%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSYLLERSFT 630
+SDI+HQSVYELVHSEDREELQ+QL+WNSFLP + +GI L E + E LLERSFT
Sbjct: 157 QSDIIHQSVYELVHSEDREELQKQLLWNSFLPADLSGIQLSEALVPEKDKLLERSFT 213
>gi|109689226|dbj|BAE96767.1| arylhydrocarbon receptor homolog b isoform [Anopheles stephensi]
Length = 538
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/311 (67%), Positives = 233/311 (74%), Gaps = 26/311 (8%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+KILHGQN+K EEPPLALFA CTPFGPPSLLEIP KE MFKSKHKLD SLVSM
Sbjct: 228 RLDIRGRVKILHGQNKKNEEPPLALFAFCTPFGPPSLLEIPPKENMFKSKHKLDFSLVSM 287
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
D +GK LGYSD+ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 288 DHKGKNTLGYSDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGAWQ 347
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LMEEEGRDLLGKRTMDFKVSYLDAG++++YF +SDQ
Sbjct: 348 WLQTSSRLVYKNSKPDFVICTHRQLMEEEGRDLLGKRTMDFKVSYLDAGISSTYF-ESDQ 406
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPTP 471
L + S S+ S +T+ QR NRRYKTQLRDFLSTCR KRKM Q AA
Sbjct: 407 L------IVSSNNSSAPSSPTTSQQRANRRYKTQLRDFLSTCRHKRKMPNQCAAEQVSPS 460
Query: 472 APPIEYL--TPPDA-------VAAAYSNMYTTGYS------ATTPE--YMSQSLYD-NRL 513
++Y+ PP AAAYSN + YS T P+ YM+ ++ N
Sbjct: 461 VAVVDYIPGGPPGTAAAAAAVAAAAYSNSINSVYSPAAHFPGTGPDNVYMAGPVHSTNFY 520
Query: 514 PY-ENLFHQYR 523
P +NLFHQYR
Sbjct: 521 PMPDNLFHQYR 531
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + Y +SDI+HQSVYELVHSEDREELQ+QL+WNSFLP + +GI
Sbjct: 136 LTCEGEVFFATHTIESYLGFHQSDIIHQSVYELVHSEDREELQKQLLWNSFLPADLSGIQ 195
Query: 613 LQECFLQENSYLLERSFT 630
L E + E LLERSFT
Sbjct: 196 LSEALVPEKDKLLERSFT 213
>gi|158299342|ref|XP_319448.3| AGAP010259-PB [Anopheles gambiae str. PEST]
gi|157014318|gb|EAA14168.4| AGAP010259-PB [Anopheles gambiae str. PEST]
Length = 539
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/311 (66%), Positives = 234/311 (75%), Gaps = 25/311 (8%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+KILHGQN+K EEPPLALFA CTPFGPPSLLEIP KE MFKSKHKLD SLVSM
Sbjct: 228 RLDIRGRVKILHGQNKKNEEPPLALFAFCTPFGPPSLLEIPPKENMFKSKHKLDFSLVSM 287
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
D +GK LGYSD+ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 288 DHKGKNTLGYSDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGAWQ 347
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LMEEEGRDLLGKRTMDFKVSYLDAG++++YF +S+Q
Sbjct: 348 WLQTSSRLVYKNSKPDFVICTHRQLMEEEGRDLLGKRTMDFKVSYLDAGISSTYF-ESEQ 406
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPTP 471
L ++ S S+ S +T+ QR NRRYKTQLRDFLSTCR KRK+ Q AA
Sbjct: 407 L-----SIVSSNNSSAPSSPTTSQQRANRRYKTQLRDFLSTCRHKRKLPNQCAAEQVSPS 461
Query: 472 APPIEYL--TPPDA-------VAAAYSNMYTTGYS------ATTPE--YMSQSLY-DNRL 513
++Y+ PP AAAYSN + YS T P+ YM+ ++ N
Sbjct: 462 VSVVDYIPGGPPGTAAAAAAVAAAAYSNSINSVYSPAAHFPGTAPDNVYMTGPVHSSNFY 521
Query: 514 PY-ENLFHQYR 523
P +NLFHQYR
Sbjct: 522 PMPDNLFHQYR 532
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + Y +SDI+HQSVYELVHSEDREELQ+QL+WNSFLP + +GI
Sbjct: 136 LTCEGEVFFATHTIESYLGFHQSDIIHQSVYELVHSEDREELQKQLLWNSFLPADLSGIQ 195
Query: 613 LQECFLQENSYLLERSFT 630
L E + E LLERSFT
Sbjct: 196 LSEALVPEKDKLLERSFT 213
>gi|195107625|ref|XP_001998409.1| GI23647 [Drosophila mojavensis]
gi|193915003|gb|EDW13870.1| GI23647 [Drosophila mojavensis]
Length = 1064
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/230 (78%), Positives = 197/230 (85%), Gaps = 7/230 (3%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIKILHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKILHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDF +YLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDF--NYLDTGLASTYFSEADQ 402
Query: 412 LT--PSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKM 459
L P+ +++P +A + TP R NRRYKTQLRDFLSTCR+KRK+
Sbjct: 403 LVVPPTSASVSP---TAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKL 449
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LAETLAPDKALYLERSFT 210
>gi|321477475|gb|EFX88434.1| hypothetical protein DAPPUDRAFT_42139 [Daphnia pulex]
Length = 426
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/230 (75%), Positives = 200/230 (86%), Gaps = 12/230 (5%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGR+K+LHGQNRK+EEPPLALFAICTPFGPPSLLE+PHKE MFKSKH+LDL+LVSM
Sbjct: 206 RLDIRGRVKVLHGQNRKMEEPPLALFAICTPFGPPSLLELPHKESMFKSKHRLDLALVSM 265
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK LLG+SD EL+++GGYDLVH+DDLAYVASAHQELLKTGASG+IAYR QT DG +Q
Sbjct: 266 DQRGKALLGHSDAELSSLGGYDLVHFDDLAYVASAHQELLKTGASGLIAYRLQTKDGQFQ 325
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDF+ISTHRPLMEEEGRDL+GKRTMDFKVSYLDAGL ++YF+D +
Sbjct: 326 WLQTSSRLVYKNSKPDFIISTHRPLMEEEGRDLMGKRTMDFKVSYLDAGLTSNYFTDQE- 384
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTP---QRVNRRYKTQLRDFLSTCRTKRK 458
A S SA +G ++ P Q++ R+YK QLRDFL+ CRTKRK
Sbjct: 385 --------AGSAISATTGGTNAHPPGTQKIGRKYKNQLRDFLTNCRTKRK 426
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 558 QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECF 617
+ A + Y +SD+VHQSVYELVHSEDREELQRQL W+S LP +S G++L +
Sbjct: 120 EVFFATHTIESYLGFHQSDVVHQSVYELVHSEDREELQRQLTWSSQLPADS-GLTLLDAL 178
Query: 618 LQENSYLLERSFT 630
+N+ +LERSFT
Sbjct: 179 RPDNAMILERSFT 191
>gi|241562037|ref|XP_002401283.1| aryl hydrocarbon receptor, putative [Ixodes scapularis]
gi|215499835|gb|EEC09329.1| aryl hydrocarbon receptor, putative [Ixodes scapularis]
Length = 674
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 223/330 (67%), Gaps = 20/330 (6%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDI+G++++LHGQN K EEPPLALFA+CTPFGPPSLLE+P KE MFKSKHKLDL++VSM
Sbjct: 204 RLDIQGKVRVLHGQNHKTEEPPLALFAVCTPFGPPSLLEMPQKESMFKSKHKLDLAMVSM 263
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQR + LLGY+D++ + GGYDLVH+DDLAYVASAHQELLKTGASG+IAYR T DG WQ
Sbjct: 264 DQR-RQLLGYADSDFMSQGGYDLVHFDDLAYVASAHQELLKTGASGLIAYRLSTKDGKWQ 322
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTS+RLVYKNSKPDF++ THRPLMEEEGRDLLGKRTMDFKV+YLDAGL S S
Sbjct: 323 WLQTSARLVYKNSKPDFILCTHRPLMEEEGRDLLGKRTMDFKVTYLDAGLTTSSSCSSTS 382
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKR-KMSAQHAAPPPPT 470
+ + GS S + + NRRYK+Q+RD LS R KR K S AP PP
Sbjct: 383 SDRNGGS-----GSLLSENDFILRCQRNRRYKSQIRDLLS--RGKRGKTSPAGEAPTPPP 435
Query: 471 PAPPIEYLTPPDAVAAAYSNMYTTGYSATTPEYMSQSLY---DNRLPYENLFHQYRPYYP 527
PA +Y A ++ GY ++ S + +N L Y +L Y P YP
Sbjct: 436 PAYLEDYGNVYATTPYAAADNGLPGYGVPQNLFLDNSRFLAPENFLHYRHLSGYYTPEYP 495
Query: 528 EYQPYTVSNGFSLPT--YEVNKSNDCDKLY 555
+Y NGF PT Y + D DKLY
Sbjct: 496 QY-----GNGFLDPTARYPYQEQKD-DKLY 519
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD + A + Y +SDI HQSVYELVHSEDREELQR L+WNS LP + +
Sbjct: 114 CDG----EVFYASHTVETYLGFHQSDICHQSVYELVHSEDREELQRFLLWNSQLPSDRSA 169
Query: 611 ISLQECFLQENSYLLERSFT 630
I+LQE L LER+FT
Sbjct: 170 IALQEALLPGKGPYLERNFT 189
>gi|391327945|ref|XP_003738455.1| PREDICTED: aryl hydrocarbon receptor-like [Metaseiulus
occidentalis]
Length = 685
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/314 (54%), Positives = 206/314 (65%), Gaps = 21/314 (6%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDI+GRIK+L GQN K E+PPLALFA+CTPFGPPSLLE+P KE MFKSKHKLDLSLVSM
Sbjct: 247 RLDIQGRIKVLLGQNHKTEDPPLALFAVCTPFGPPSLLEMPQKESMFKSKHKLDLSLVSM 306
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
D RGK LL Y+D ++AN GGYDLVH+DDL YVASAHQELLKTGASG+IAYR DG WQ
Sbjct: 307 DARGKQLLNYTDQDIANFGGYDLVHHDDLEYVASAHQELLKTGASGLIAYRLSAKDGSWQ 366
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTS+RLVYKNSKPDF++ THRPLMEEEGRDLLGKRTMDFKV+YLD GLN Q
Sbjct: 367 WLQTSTRLVYKNSKPDFILCTHRPLMEEEGRDLLGKRTMDFKVTYLDTGLN--------Q 418
Query: 412 LTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDF-LSTCRTKRKMSAQHAAPPPPT 470
L + +P +Q ++ ++ R+YK + + ++ R K +S
Sbjct: 419 LLSGSISSPDTPPLSQDNTTRLESEKPRRKYKKESQSMQVAKKRIKTAISPDVCTGMQLP 478
Query: 471 PAPPIEYLTPPDAVAAAYSNMYTTGYSATTPEYMSQSLYDNRLPYE-------NLFHQYR 523
PAP +L D AY+++Y T Y L+DN P+ + H
Sbjct: 479 PAPAY-HLPTVDPSEPAYNSVYPTYTHPELSSYPQNFLFDNSRPFHLAAPEFLHYRHHLG 537
Query: 524 PYYP----EYQPYT 533
YYP +Y P+T
Sbjct: 538 GYYPSEYSQYSPFT 551
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD + A + Y +SDI HQSV+ELVHSEDR++L R LMWNS LP + A
Sbjct: 156 CDG----EVFFASHTVETYLGFHQSDICHQSVFELVHSEDRDDLLRYLMWNSQLPADRAN 211
Query: 611 ISLQECFLQ-ENSYLLERSFT 630
IS+Q E LER+FT
Sbjct: 212 ISVQHMLQSPELHRHLERNFT 232
>gi|7839662|gb|AAF70378.1|AF261769_1 aryl hydrocarbon receptor-like protein [Mya arenaria]
Length = 852
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 176/299 (58%), Gaps = 38/299 (12%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L+I G I+++HGQ + EEP LALFA C PFGP SL+++P +E+ FKSKHK+D S +SMD
Sbjct: 224 LEISGWIRVMHGQPNRSEEPHLALFATCCPFGPLSLMDLPSRELTFKSKHKMDFSPLSMD 283
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
RG+M+ GY D +LA GYDL+H DDL Y A+AH EL+KTG++G+IAYR+ T D W W
Sbjct: 284 NRGRMMFGYGDRDLATRSGYDLIHPDDLNYFAAAHGELIKTGSAGLIAYRWLTKDLQWIW 343
Query: 353 LQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY--LDAGLNNSYFSDSD 410
LQ+S +++YKNSKPDFVI+THR L E+EG+DL KR +FK+ Y LD + + SD
Sbjct: 344 LQSSCKVIYKNSKPDFVIATHRQLTEDEGQDLFHKRGNEFKLPYPLLDLDMCTGFDFPSD 403
Query: 411 QLTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRK----MSAQHAAP 466
L S G+ S ++ KTQ+RDFL R ++ ++ + A
Sbjct: 404 DLV-----------SKMKGNRS-------KKQKTQVRDFLQNNRKRKNGKEPVNGLYGAY 445
Query: 467 PPPTP------APPIEYLTPPDAVAAAYSNMY---TTGYSATTPEYMSQSLYDNRLPYE 516
P P Y P + +A + S++ T GY A + S+Y PY
Sbjct: 446 PAINGYENSEYKPEFLYHYPSNNIAGSESDLLYNRTPGYGA-----LGSSMYPGTDPYR 499
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD + + T +Q Y +SDI+HQSV EL+HSEDR+E +RQL WN+ LP + A
Sbjct: 133 CDSEVFYASRTVEQ----YLGFHQSDIIHQSVMELIHSEDRDEFKRQLTWNAMLPADKAN 188
Query: 611 ISLQECFLQENSYLLERSFT 630
++L E + EN + L RSFT
Sbjct: 189 LTLHEVMMPENYHYLHRSFT 208
>gi|443702175|gb|ELU00336.1| hypothetical protein CAPTEDRAFT_145851, partial [Capitella teleta]
Length = 599
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 130/164 (79%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L+I GR+K+L GQ+ K EEP LALFAIC PFGP LL++P ++ FKSKHK+D++ +SMD
Sbjct: 210 LEISGRLKMLIGQSLKGEEPQLALFAICCPFGPLPLLDVPPRDYTFKSKHKMDMAPISMD 269
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
RGK+L GYSD EL GYDL+H DDL+Y A+AHQEL+KTG+SG+IAYR T D W W
Sbjct: 270 PRGKLLFGYSDRELLERSGYDLIHPDDLSYYAAAHQELIKTGSSGLIAYRLMTKDFRWIW 329
Query: 353 LQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
LQTSS+++YKNSKPDFVI THR L E+EG DL+GKR +FK+ Y
Sbjct: 330 LQTSSKVIYKNSKPDFVICTHRHLTEDEGHDLVGKRGSEFKLPY 373
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD + A + + Y +SDI+HQS EL+HSEDREE + QL W + E
Sbjct: 119 CDG----EVFFASRTVEQYLGFHQSDIIHQSALELIHSEDREEFKNQLNWRHQMTQEHPD 174
Query: 611 ISLQECFLQENSYLLERSFT 630
+ Q+ L EN +LL+R FT
Sbjct: 175 WTPQQAMLPENQHLLQRCFT 194
>gi|405957204|gb|EKC23432.1| Aryl hydrocarbon receptor [Crassostrea gigas]
Length = 816
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 136/183 (74%), Gaps = 2/183 (1%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L+I G I++LHGQN + EEP LALFA C PFGP SL++IP +E+ FKSKHK+D S +SMD
Sbjct: 213 LEISGWIRVLHGQNVRTEEPQLALFATCCPFGPLSLMDIPSRELTFKSKHKMDFSPMSMD 272
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
RGK + G++D ELA GYDL+H DDL Y +SAHQEL+KTG+SG+IAYR+ T D W W
Sbjct: 273 NRGKAMFGFADRELATKSGYDLIHPDDLNYFSSAHQELIKTGSSGLIAYRWCTKDFRWLW 332
Query: 353 LQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY--LDAGLNNSYFSDSD 410
LQ+S +++YKNSKPDFVI THR L ++EG DL KR +FK+ Y LD + + + +D
Sbjct: 333 LQSSCKVIYKNSKPDFVICTHRQLTDDEGADLFHKRGNEFKLPYPLLDLDICSGFDFPND 392
Query: 411 QLT 413
++
Sbjct: 393 EIV 395
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD + + T +Q Y +SDI+HQSV EL+HSEDREE +RQL WNS LP + +
Sbjct: 122 CDGEVFYASRTVEQ----YLGFHQSDIIHQSVMELIHSEDREEFKRQLSWNSTLPQDKSS 177
Query: 611 ISLQECFLQENSYLLERSFT 630
+SL E + EN+ L RSFT
Sbjct: 178 MSLHELMMPENARYLHRSFT 197
>gi|73762523|gb|AAZ83700.1| aryl hydrocarbon receptor [Dreissena polymorpha]
Length = 846
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 150/227 (66%), Gaps = 20/227 (8%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L+I G I+++HGQ +EP LALFA C PFGP SL+++P +E+ FKSKHK+D + +SMD
Sbjct: 224 LEISGWIRVMHGQPNHSDEPQLALFATCCPFGPLSLMDLPSRELTFKSKHKMDFAPLSMD 283
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
RG+M+ GY D +LA + GYDL+H DDL Y A+AH EL+KTG++G+IAYR+ T D W W
Sbjct: 284 NRGRMMFGYGDRDLAMLSGYDLIHPDDLNYFAAAHGELIKTGSAGLIAYRWLTKDYQWLW 343
Query: 353 LQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY--LDAGLNNSYFSDSD 410
LQ+S +++YKNSKPDFVI+THR L E+EG+DL KR +FK+ Y LD + + S+
Sbjct: 344 LQSSCKVIYKNSKPDFVIATHRQLTEDEGQDLFHKRGNEFKLPYPLLDLDMCTGFDFPSE 403
Query: 411 QLTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKR 457
L P + N++ KTQ+RDFL + ++
Sbjct: 404 DLVPKMKG------------------NRNKKQKTQVRDFLQNNKKRK 432
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD + + T +Q Y +SDI+HQSV EL+HSEDR+E +RQL WNS LP + A
Sbjct: 133 CDSEVFYASRTVEQ----YLGFHQSDIIHQSVMELIHSEDRDEFKRQLTWNSMLPADKAT 188
Query: 611 ISLQECFLQENSYLLERSFT 630
++L E + EN + L RSFT
Sbjct: 189 LTLHEVMMPENYHYLHRSFT 208
>gi|227908937|gb|ACL80140.3| aryl hydrocarbon receptor [Azumapecten farreri]
Length = 821
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/182 (56%), Positives = 136/182 (74%), Gaps = 2/182 (1%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L+I G I++LHGQN + +EP LALFA C PFGP SLL++P +E+ FKSKHK+D S +SMD
Sbjct: 221 LEINGWIRVLHGQNVRTDEPQLALFATCCPFGPLSLLDLPSRELTFKSKHKMDFSPMSMD 280
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
RGKM+ +SD ELA GYDL+H DDL+Y A+AHQEL+KTG+SG+IAYR+ T D W W
Sbjct: 281 NRGKMMFSFSDRELATKSGYDLIHPDDLSYFAAAHQELIKTGSSGLIAYRWLTKDFRWLW 340
Query: 353 LQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY--LDAGLNNSYFSDSD 410
LQ+S +++ KNSKPDF+I THR L ++EG+DL KR +FK+ Y LD + + + SD
Sbjct: 341 LQSSCKVIXKNSKPDFIICTHRQLTDDEGQDLFHKRGNEFKLPYPLLDLDICSGFDFPSD 400
Query: 411 QL 412
L
Sbjct: 401 DL 402
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 558 QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECF 617
+ A + + Y +SDI+HQSV EL+HSEDR+E +RQL WNS LP + + + L E
Sbjct: 133 EVFFASRTVEQYLGFHQSDIIHQSVMELIHSEDRDEFKRQLTWNSALPSDKSTLPLHEAM 192
Query: 618 LQENSYLLERSFT 630
+ EN + + RSFT
Sbjct: 193 MPENYHHMHRSFT 205
>gi|336319053|gb|ADN84943.2| spineless [Biston betularia]
Length = 99
Score = 192 bits (487), Expect = 5e-46, Method: Composition-based stats.
Identities = 89/98 (90%), Positives = 93/98 (94%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQN+K EEPPLALFAIC PFGPPSLLEIP KEVMFKSKHKLDL+LVSM
Sbjct: 1 RLDIRGRIKVLHGQNKKTEEPPLALFAICAPFGPPSLLEIPQKEVMFKSKHKLDLALVSM 60
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
DQRGKMLLGY+D EL NMGGYDLVHYDDLAYVASAHQE
Sbjct: 61 DQRGKMLLGYTDAELGNMGGYDLVHYDDLAYVASAHQE 98
>gi|295149355|gb|ACM16807.3| aryl hydrocarbon receptor [Ruditapes philippinarum]
Length = 765
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 108/136 (79%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L+I G I+++HGQ + E+P LALFA C PFGP SL+++P +E+ FKSKHK+D S +SMD
Sbjct: 221 LEISGWIRVMHGQPNRSEDPQLALFATCCPFGPLSLMDLPSRELTFKSKHKMDFSPLSMD 280
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
RG+M+ GY D ELA+ GYDL+H DDL Y ++AH+EL+KTG++G+IAYR+ T D W W
Sbjct: 281 NRGRMMFGYGDRELASKSGYDLIHPDDLNYFSAAHEELIKTGSAGLIAYRWFTKDFQWVW 340
Query: 353 LQTSSRLVYKNSKPDF 368
LQ+S +++YKNSKPDF
Sbjct: 341 LQSSCKVIYKNSKPDF 356
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD + + T +Q Y +SDI+HQSV EL+HSEDREE +RQL WNS LP + +
Sbjct: 130 CDSEVFYASRTVEQ----YLGFHQSDIIHQSVMELIHSEDREEFKRQLTWNSMLPADKSN 185
Query: 611 ISLQECFLQENSYLLERSFT 630
++L E + EN + L RSFT
Sbjct: 186 LTLHEIMMPENYHYLHRSFT 205
>gi|417412689|gb|JAA52719.1| Putative aryl-hydrocarbon receptor, partial [Desmodus rotundus]
Length = 786
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 130/208 (62%), Gaps = 8/208 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 178 MNFQGRLKYLHGQNKKAKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 237
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM+ +R T
Sbjct: 238 PTGVDAKGKLILGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMVVFRLLTK 297
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M K+ ++ A +
Sbjct: 298 DNQWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNM--KLPFMFATGEAVLY 355
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
S+ P TL P + SG S T
Sbjct: 356 EISNPFPPMMDTLPVRPQNIASGQDSVT 383
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 64 NGFVLVV-----TTDAVVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 112
Query: 596 RQLMW 600
RQL W
Sbjct: 113 RQLHW 117
>gi|67459929|ref|NP_001019987.1| aryl hydrocarbon receptor [Danio rerio]
gi|66132539|gb|AAY42958.1| aryl hydrocarbon receptor 1B [Danio rerio]
Length = 940
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 119/170 (70%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQNR+L++ P LALFAI TP PPS++EI K ++F++KHKLD +
Sbjct: 234 LNFQGRLKFLHGQNRRLDDGGQMPPQLALFAIATPLQPPSIMEIRTKNMIFRTKHKLDFT 293
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 294 PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 353
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++I+T RPL+EEEG + L KR+M ++
Sbjct: 354 DNRWKWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTF 403
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 23/94 (24%)
Query: 554 LYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA---- 609
YC T+ Q+ G+ ++D++HQ+V+EL+H+ED++ +R L W PP S
Sbjct: 131 FYCSHTI---QDYLGF---HQTDVMHQNVFELIHTEDQQAFRRNLHWALNPPPASTQTED 184
Query: 610 ---------GISLQEC----FLQENSYLLERSFT 630
+SL C ENS LER+F
Sbjct: 185 SSEDGDPAPNMSLVLCNPDQLPPENSSFLERNFV 218
>gi|190338432|gb|AAI63508.1| Aryl hydrocarbon receptor 1b [Danio rerio]
Length = 940
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 119/170 (70%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQNR+L++ P LALFAI TP PPS++EI K ++F++KHKLD +
Sbjct: 234 LNFQGRLKFLHGQNRRLDDGGQMPPQLALFAIATPLQPPSIMEIRTKNMIFRTKHKLDFT 293
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 294 PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 353
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++I+T RPL+EEEG + L KR+M ++
Sbjct: 354 DNRWKWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTF 403
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 23/94 (24%)
Query: 554 LYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA---- 609
YC T+ Q+ G+ ++D++HQ+V+EL+H+ED++ +R L W PP S
Sbjct: 131 FYCSHTI---QDYLGF---HQTDVMHQNVFELIHTEDQQAFRRNLHWALNPPPASTQTED 184
Query: 610 ---------GISLQEC----FLQENSYLLERSFT 630
+SL C ENS LER+F
Sbjct: 185 SSEDGDPAPNMSLVLCNPDQLPPENSSFLERNFV 218
>gi|41350639|gb|AAS00540.1| aryl hydrocarbon receptor 1 beta, partial [Salmo salar]
Length = 947
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L ++GR+K LHGQN +L++ P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 199 LTLQGRLKFLHGQNCRLDDGCNVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 258
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 259 PMACDARGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 318
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++I+T RPL+EEEG + L KR+M ++
Sbjct: 319 DNRWRWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTF 368
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
++D++HQSV++L+H+ED++E +R L W
Sbjct: 111 QTDVMHQSVFDLIHTEDQQEFRRNLHW 137
>gi|350588840|ref|XP_003130237.3| PREDICTED: aryl hydrocarbon receptor [Sus scrofa]
Length = 900
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 133/214 (62%), Gaps = 8/214 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 286 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 345
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 346 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAEYHVRMIKTGESGMIVFRLLTK 405
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
D W W+Q+++RLVYKN +PD++I+T RPL +EEG++ L KRT+ K+ ++ A +
Sbjct: 406 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGKEHLRKRTL--KLPFMFATGEAVLY 463
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNR 440
+ TP+ L S +G S T +++
Sbjct: 464 EITSPFTPTVDPLPVRTKSGANGKDSATKSSLSK 497
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 173 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 221
Query: 596 RQLMW 600
RQL W
Sbjct: 222 RQLHW 226
>gi|45250034|gb|AAS55733.1| aryl hydrocarbon receptor 1b [Salmo salar]
Length = 815
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L ++GR+K LHGQN +L++ P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 118 LTLQGRLKFLHGQNCRLDDGCNVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 177
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 178 PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 237
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++I+T RPL+EEEG + L KR+M ++
Sbjct: 238 DNRWRWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTF 287
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
++D++HQSV++L+H+ED++E +R L W
Sbjct: 30 QTDVMHQSVFDLIHTEDQQEFRRNLHW 56
>gi|185133424|ref|NP_001117158.1| aryl hydrocarbon receptor 1 alpha [Salmo salar]
gi|41350637|gb|AAS00539.1| aryl hydrocarbon receptor 1 alpha [Salmo salar]
Length = 1029
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 117/170 (68%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L ++GR+K LHGQN L++ P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 241 LTLQGRLKFLHGQNCHLDDGCNVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 300
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 301 PMACDARGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 360
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++I+T RPL+EEEG + L KR+M ++
Sbjct: 361 DNRWRWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTF 410
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
++D++HQSV++L+H+ED++E +R L W
Sbjct: 153 QTDVMHQSVFDLIHTEDQQEFRRNLHW 179
>gi|83817015|ref|NP_001033051.1| aryl hydrocarbon receptor 1A [Takifugu rubripes]
gi|68349471|gb|AAY96629.1| aryl hydrocarbon receptor 1A [Takifugu rubripes]
Length = 973
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L I+GR+K LHGQN + E P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 232 LSIQGRLKFLHGQNHRQENGTKIPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 292 PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M +Y
Sbjct: 352 ENRWKWVQANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTY 401
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 20/75 (26%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQ------------------- 614
++D++HQSVYELVH+ED++EL+R L W + PP +A S Q
Sbjct: 142 QTDVMHQSVYELVHTEDQQELRRNLHW-ALNPPAAASTSSQDSPQEMEADSSSSLLTYSP 200
Query: 615 ECFLQENSYLLERSF 629
E ENS LER+F
Sbjct: 201 EHLPPENSSFLERNF 215
>gi|417515445|gb|JAA53551.1| aryl hydrocarbon receptor [Sus scrofa]
Length = 848
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 295 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAEYHVRMIKTGESGMIVFRLLTK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
D W W+Q+++RLVYKN +PD++I+T RPL +EEG++ L KRT+
Sbjct: 355 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGKEHLRKRTL 398
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQLHW 175
>gi|403180740|gb|AFR24092.1| aryl hydrocarbon receptor 1 [Squalus acanthias]
Length = 922
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 117/170 (68%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
LD +GR+K LHGQN+K E+ P LALFA+ TP PPS+LEI K ++F++KHKLD +
Sbjct: 232 LDFQGRLKFLHGQNKKAEDGAPIPPQLALFAVATPLQPPSILEIRTKNMIFRTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ + A H ++KTG SG+ +R T
Sbjct: 292 PLACDAKGKIVLGYTEAELRARGTGYQFIHAADMLHCAENHIRMIKTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR++ ++
Sbjct: 352 DNRWAWVQANARLVYKNGKPDYIIATQRPLVDEEGGEELRKRSLHLPFTF 401
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
++D++HQSV+EL+H+ED++E +R L W
Sbjct: 145 QTDVMHQSVFELIHTEDQQEFRRNLHW 171
>gi|329664848|ref|NP_001192955.1| aryl hydrocarbon receptor [Bos taurus]
gi|296488653|tpg|DAA30766.1| TPA: aryl hydrocarbon receptor [Bos taurus]
Length = 844
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL+ G GY VH D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTGCDAKGKLVLGYTEAELSMRGSGYQFVHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 356 DNRWAWVQSNARLVYKNGRPDYIIATQRPLTDEEGMEHLNKRNM 399
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 122 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 170
Query: 596 RQLMW 600
RQL W
Sbjct: 171 RQLHW 175
>gi|355667647|gb|AER93935.1| aryl hydrocarbon receptor [Mustela putorius furo]
Length = 683
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 112/166 (67%), Gaps = 6/166 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSLLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTACDAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDF 392
D W W+Q+++RLVYKN +PD++I+T RPL EEEG + L KR F
Sbjct: 356 DNRWAWVQSNARLVYKNGRPDYIIATQRPLTEEEGTEHLRKRNTKF 401
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 28/111 (25%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 122 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRGEFQ 170
Query: 596 RQLMWNSFLP----------------PESAGISLQECFLQENSYLLERSFT 630
RQL W + P P++ G + ENS ++ERSF
Sbjct: 171 RQLHW-TLNPSPCTDSGQRIDEANGLPQTVGCYTPDQLPPENSSVMERSFV 220
>gi|38385548|gb|AAR19365.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+I+GR+K LHGQN++ E P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 232 LNIQGRLKFLHGQNQQRENGGKATPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 292 PLACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M ++
Sbjct: 352 ENRWKWVQANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTF 401
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
++D++HQS YELVH+ED++EL+R L W + PP++A
Sbjct: 141 QTDVIHQSAYELVHTEDQQELRRNLHW-ALNPPQAA 175
>gi|306850284|gb|ADN06662.1| aryl hydrocarbon receptor [Sus scrofa]
Length = 340
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 132/214 (61%), Gaps = 8/214 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 32 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 91
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 92 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAEYHVRMIKTGESGMIVFRLLTK 151
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
D W W+Q+++RLVYKN +PD++I+T RPL +EEG++ L KRT+ K+ ++ A +
Sbjct: 152 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGKEHLRKRTL--KLPFMFATGEAVLY 209
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNR 440
+ P+ L S +G S T +++
Sbjct: 210 EITSPFPPTVDPLPVRTKSGANGKDSATKSSLSK 243
>gi|38385561|gb|AAR19366.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+I+GR+K LHGQN++ E P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 232 LNIQGRLKFLHGQNQQRENGGKATPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 292 PLACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M ++
Sbjct: 352 ENRWKWVQANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTF 401
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
++D++HQS YELVH+ED++EL+R L W + PP++A
Sbjct: 141 QTDVIHQSAYELVHTEDQQELRRNLHW-ALNPPQAA 175
>gi|38385608|gb|AAR19369.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+I+GR+K LHGQN++ E P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 232 LNIQGRLKFLHGQNQQRENGGKATPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 292 PLACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M ++
Sbjct: 352 ENRWKWVQANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTF 401
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
++D++HQS YELVH+ED++EL+R L W + PP++A
Sbjct: 141 QTDVIHQSAYELVHTEDQQELRRNLHW-ALNPPQAA 175
>gi|301764064|ref|XP_002917450.1| PREDICTED: aryl hydrocarbon receptor-like [Ailuropoda melanoleuca]
Length = 836
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGRLKYLHGQNKKGKDGSMLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 297 PTACDAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 357 DNRWAWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNM 400
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 30/112 (26%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 123 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRGEFQ 171
Query: 596 RQLMWNSFLPPESAGISLQE------------CFL-----QENSYLLERSFT 630
RQL W L P S Q C+ ENS L+ERSF
Sbjct: 172 RQLHWT--LNPSQCTDSGQRIDEANGLPQAVGCYTPDQPPPENSSLMERSFV 221
>gi|17232942|gb|AAC60334.3| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
gi|38385532|gb|AAR19364.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+I+GR+K LHGQN++ E P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 232 LNIQGRLKFLHGQNQQRENGGKATPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 292 PLACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M ++
Sbjct: 352 ENRWKWVQANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTF 401
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
++D++HQS YELVH+ED++EL+R L W + PP++A
Sbjct: 141 QTDVIHQSAYELVHTEDQQELRRNLHW-ALNPPQAA 175
>gi|38385576|gb|AAR19367.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+I+GR+K LHGQN++ E P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 232 LNIQGRLKFLHGQNQQRENGGKATPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 292 PLACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M ++
Sbjct: 352 ENRWKWVQANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTF 401
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
++D++HQS YELVH+ED++EL+R L W + PP++A
Sbjct: 141 QTDVIHQSAYELVHTEDQQELRRNLHW-ALNPPQAA 175
>gi|38385589|gb|AAR19368.1| aryl hydrocarbon receptor 1 [Fundulus heteroclitus]
Length = 944
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+I+GR+K LHGQN++ E P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 232 LNIQGRLKFLHGQNQQRENGGKATPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 292 PLACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M ++
Sbjct: 352 ENRWKWVQANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTF 401
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
++D++HQS YELVH+ED++EL+R L W + PP++A
Sbjct: 141 QTDVIHQSAYELVHTEDQQELRRNLHW-ALNPPQAA 175
>gi|118419961|gb|ABK88250.1| aryl hydrocarbon receptor [Megaptera novaeangliae]
Length = 851
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 128/205 (62%), Gaps = 11/205 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQNRK ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNRKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTGCDAKGRIVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMD--FKVSYLDAGL--- 401
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M F + +A L
Sbjct: 356 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNMKLPFMFTTGEAVLYEV 415
Query: 402 NNSYFSDSDQLTPSHQTLAPSPGSA 426
N + S D L +T A GSA
Sbjct: 416 TNPFPSIMDPLPIRTKTGAGGKGSA 440
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQLHW 175
>gi|45250057|gb|AAS55734.1| aryl hydrocarbon receptor 1b [Salmo salar]
Length = 526
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 117/170 (68%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L ++GR+K LHGQN L++ P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 2 LTLQGRLKFLHGQNCHLDDGCNVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 61
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 62 PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 121
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++I+T RPL+EEEG + L KR+M ++
Sbjct: 122 DNRWRWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTF 171
>gi|73976458|ref|XP_532485.2| PREDICTED: aryl hydrocarbon receptor [Canis lupus familiaris]
Length = 853
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 130/214 (60%), Gaps = 8/214 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTACDAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M K+ ++ +
Sbjct: 356 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNM--KLPFMFTTGEAVLY 413
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNR 440
++ P L + SG S T +N+
Sbjct: 414 EITNPFPPMMDPLPLRTKNGASGRDSATKSTLNK 447
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 37/72 (51%), Gaps = 15/72 (20%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN---SFLPPESAGISLQECFLQ----------- 619
+SD++HQSVYEL+H+EDR E QRQL W S G+ Q
Sbjct: 149 QSDVIHQSVYELIHTEDRGEFQRQLHWTLNPSQCTDSGQGVDDANGLPQPVVCYNPDQLP 208
Query: 620 -ENSYLLERSFT 630
ENS L+ERSF
Sbjct: 209 PENSSLMERSFV 220
>gi|281349200|gb|EFB24784.1| hypothetical protein PANDA_005677 [Ailuropoda melanoleuca]
Length = 814
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 215 MNFQGRLKYLHGQNKKGKDGSMLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 274
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 275 PTACDAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 334
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 335 DNRWAWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNM 378
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 30/112 (26%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 101 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRGEFQ 149
Query: 596 RQLMWNSFLPPESAGISLQE------------CFL-----QENSYLLERSFT 630
RQL W L P S Q C+ ENS L+ERSF
Sbjct: 150 RQLHWT--LNPSQCTDSGQRIDEANGLPQAVGCYTPDQPPPENSSLMERSFV 199
>gi|348539804|ref|XP_003457379.1| PREDICTED: aryl hydrocarbon receptor-like [Oreochromis niloticus]
Length = 925
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 117/170 (68%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+I+GR+K LHGQN+ E P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 216 LNIQGRLKFLHGQNQWQENGGKAAPLLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 275
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 276 PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTK 335
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M +Y
Sbjct: 336 ENQWKWVQANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTY 385
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 14/70 (20%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPP------------ESAGISLQ-ECFLQE 620
++D++HQSVYELVH+ED++EL+R L W + PP S+ +S E E
Sbjct: 132 QTDVMHQSVYELVHTEDQQELRRNLDW-ALNPPAPTSPKEMEFDSSSSVVSYNPEHLPPE 190
Query: 621 NSYLLERSFT 630
NS LERSF
Sbjct: 191 NSSFLERSFV 200
>gi|326922315|ref|XP_003207395.1| PREDICTED: aryl hydrocarbon receptor-like [Meleagris gallopavo]
Length = 915
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 119/170 (70%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+++GR++ LHGQN++ E+ P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 227 LNLQGRLRFLHGQNKRSEDGSALPPQLALFAISTPLQPPSILEIRTKNMIFRTKHKLDFT 286
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 287 PLACDAKGKIVLGYTEAELRMCGTGYQFIHAADMLYCAENHIRMMKTGESGLTVFRLLTK 346
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKNSKP+++I T RPL++EEG + L KR+M ++
Sbjct: 347 DKHWKWVQANARLVYKNSKPEYIIVTQRPLVDEEGGEHLRKRSMHLPFTF 396
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 23/27 (85%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
++D++HQS+++L+H+ED +E +R L W
Sbjct: 140 QTDVMHQSIFKLIHAEDHQEFRRNLHW 166
>gi|440908310|gb|ELR58343.1| Aryl hydrocarbon receptor [Bos grunniens mutus]
Length = 844
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL+ G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTGCDAKGKLVLGYTEAELSMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
D W W+Q+++RLVY+N +PD++I+T RPL +EEG + L KR M
Sbjct: 356 DNRWAWVQSNARLVYRNGRPDYIIATQRPLTDEEGMEHLNKRNM 399
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 26/110 (23%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 122 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 170
Query: 596 RQLMW--NSFLPPESA-------GISLQECFLQ------ENSYLLERSFT 630
RQL W N P+S G+S + ENS +ERSF
Sbjct: 171 RQLHWALNPQQCPDSGQRIDEANGLSQPAVYYNPDQIPPENSSFMERSFV 220
>gi|426227437|ref|XP_004007824.1| PREDICTED: aryl hydrocarbon receptor [Ovis aries]
Length = 842
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 117/177 (66%), Gaps = 8/177 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSMLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTGCDAKGKLVLGYTEAELCLRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMD--FKVSYLDAGL 401
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M F + DA L
Sbjct: 356 DNRWAWVQSNARLVYKNGRPDYIIATQRPLTDEEGMEHLNKRNMKLPFMFTTGDAVL 412
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQLHW 175
>gi|363735786|ref|XP_003641611.1| PREDICTED: aryl hydrocarbon receptor-like [Gallus gallus]
Length = 922
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 119/170 (70%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+++GR++ LHGQN++ E+ P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 227 LNLQGRLRFLHGQNKRSEDGSALPPQLALFAISTPLQPPSILEIRTKNMIFRTKHKLDFT 286
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 287 PLACDAKGKIVLGYTEAELRMCGTGYQFIHAADMLYCAENHIRMMKTGESGLTVFRLLTK 346
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKNSKP+++I T RPL++EEG + L KR+M ++
Sbjct: 347 DKHWKWVQANARLVYKNSKPEYIIVTQRPLVDEEGGEHLRKRSMHLPFTF 396
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 23/27 (85%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
++D++HQS+++L+H+ED +E +R L W
Sbjct: 140 QTDVMHQSIFKLIHTEDHQEFRRNLHW 166
>gi|47221953|emb|CAG08208.1| unnamed protein product [Tetraodon nigroviridis]
Length = 549
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+I+GR+K LHGQN + E LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 300 LNIQGRLKFLHGQNHRQENGTKIPSQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 359
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 360 PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTK 419
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M +Y
Sbjct: 420 DNRWKWVQANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTY 469
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQEC 616
++D++HQSVYELVH+ED++EL+R L W + PP + S Q+C
Sbjct: 210 QTDVMHQSVYELVHTEDQQELRRNLHW-ALNPPAAPSTSSQDC 251
>gi|82408364|gb|AAF15281.2|AF192503_1 aryl hydrocarbon receptor [Sterna hirundo]
Length = 859
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 148/274 (54%), Gaps = 28/274 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S ++P + N SQ YN D L S E N I +
Sbjct: 171 QRQLHWALNPAQSADSAPSVQGD--NGFSQPATYYNPDQLPPENSSFMERNFICRLRC-- 226
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 227 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQP 274
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY VH D+ Y A
Sbjct: 275 PSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCA 334
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 335 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEH 394
Query: 385 LGKRTMD--FKVSYLDAGLNNSYFSDSDQLTPSH 416
L KR M F + +A L F S + PS
Sbjct: 395 LRKRNMKLPFMFATGEAVLYEVSFPMSSLMDPSQ 428
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA
Sbjct: 150 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPAQSA 184
>gi|87116996|gb|ABD19784.1| aryl hydrocarbon receptor [Larus argentatus]
Length = 745
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 148/274 (54%), Gaps = 28/274 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S ++P + N SQ YN D L S E N I +
Sbjct: 116 QRQLHWALNPAQSADSAPSVQGD--NGFSQPATYYNPDQLPPENSSFMERNFICRLRC-- 171
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 172 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQP 219
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY VH D+ Y A
Sbjct: 220 PSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCA 279
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 280 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEH 339
Query: 385 LGKRTMD--FKVSYLDAGLNNSYFSDSDQLTPSH 416
L KR M F + +A L F S + PS
Sbjct: 340 LRKRNMKLPFMFATGEAVLYEVSFPMSSLMDPSQ 373
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA
Sbjct: 95 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPAQSA 129
>gi|312147016|dbj|BAJ33495.1| aryl hydrocarbon receptor [Falco peregrinus]
Length = 862
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 147/274 (53%), Gaps = 28/274 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S + P + N SQ YN D L S E N I +
Sbjct: 171 QRQLHWALNPAQSADSGPSIQGD--NGFSQPATYYNPDQLPPENSSFMERNFICRLRC-- 226
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 227 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQP 274
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY VH D+ Y A
Sbjct: 275 PSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCA 334
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 335 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEH 394
Query: 385 LGKRTMD--FKVSYLDAGLNNSYFSDSDQLTPSH 416
L KR M F + +A L F S + PS
Sbjct: 395 LRKRNMKLPFMFATGEAVLYEVSFPMSSLMDPSQ 428
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 17/72 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA--GISLQ--ECFLQ---------- 619
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA G S+Q F Q
Sbjct: 150 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPAQSADSGPSIQGDNGFSQPATYYNPDQL 208
Query: 620 --ENSYLLERSF 629
ENS +ER+F
Sbjct: 209 PPENSSFMERNF 220
>gi|262399170|dbj|BAI48787.1| Aryl hydrocarbon receptor [Apodemus speciosus]
Length = 849
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 115/164 (70%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGM A+R T
Sbjct: 295 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMTAFRLLTK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEG++ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGQEHLQKRSM 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 15/71 (21%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW--------NSFL-------PPESAGISLQECFL 618
+SD++HQSVYEL+H+EDR E QRQL W +S L PP+ A E
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQGTDSALGVDEAHGPPQPAIYYTPEQLP 207
Query: 619 QENSYLLERSF 629
EN+ +ER F
Sbjct: 208 PENTPFMERCF 218
>gi|7839652|gb|AAF70373.1|AF260832_1 aryl hydrocarbon receptor [Gallus gallus]
Length = 858
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 137/246 (55%), Gaps = 26/246 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S + P + N SQ YN D L S E N I +
Sbjct: 170 QRQLHWALNPTQSADSGPSVQGD--NGFSQPANYYNPDQLPPENSSFMERNFICRLRC-- 225
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 226 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQP 273
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY +H D+ Y A
Sbjct: 274 PSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCA 333
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++IST RPL +EEG +
Sbjct: 334 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIISTQRPLTDEEGAEH 393
Query: 385 LGKRTM 390
L KR M
Sbjct: 394 LRKRNM 399
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 17/72 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA--GISLQ--ECFLQ---------- 619
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA G S+Q F Q
Sbjct: 149 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPTQSADSGPSVQGDNGFSQPANYYNPDQL 207
Query: 620 --ENSYLLERSF 629
ENS +ER+F
Sbjct: 208 PPENSSFMERNF 219
>gi|45383874|ref|NP_989449.1| aryl hydrocarbon receptor [Gallus gallus]
gi|19343352|gb|AAF15280.2|AF192502_1 aryl hydrocarbon receptor [Gallus gallus]
Length = 858
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 137/246 (55%), Gaps = 26/246 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S + P + N SQ YN D L S E N I +
Sbjct: 170 QRQLHWALNPTQSADSGPSVQGD--NGFSQPANYYNPDQLPPENSSFMERNFICRLRC-- 225
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 226 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQP 273
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY +H D+ Y A
Sbjct: 274 PSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCA 333
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++IST RPL +EEG +
Sbjct: 334 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIISTQRPLTDEEGAEH 393
Query: 385 LGKRTM 390
L KR M
Sbjct: 394 LRKRNM 399
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 17/72 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA--GISLQ--ECFLQ---------- 619
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA G S+Q F Q
Sbjct: 149 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPTQSADSGPSVQGDNGFSQPANYYNPDQL 207
Query: 620 --ENSYLLERSF 629
ENS +ER+F
Sbjct: 208 PPENSSFMERNF 219
>gi|118419959|gb|ABK88249.1| aryl hydrocarbon receptor [Eubalaena glacialis]
Length = 850
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 112/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTGCDAKGRIVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 356 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNM 399
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQLHW 175
>gi|297189741|gb|ADI24457.1| aryl hydrocarbon receptor 1 [Phasianus colchicus]
Length = 860
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 138/246 (56%), Gaps = 26/246 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S + P + N SQ YN D L S E N I +
Sbjct: 170 QRQLHWALNPAQSSDSGPSVQGD--NGFSQPANYYNPDQLPPENSSFMERNFICRLRC-- 225
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 226 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGTALSPQLALFAVATPLQP 273
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + + D +GK++LGY++ EL G GY +H D+ Y A
Sbjct: 274 PSILEIRTKNFIFRTKHKLDFTPIGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCA 333
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 334 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEH 393
Query: 385 LGKRTM 390
L KR M
Sbjct: 394 LRKRNM 399
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SDI+HQSV+EL+H+EDR E QRQL W
Sbjct: 149 QSDIIHQSVFELIHTEDRPEFQRQLHW 175
>gi|326921855|ref|XP_003207170.1| PREDICTED: aryl hydrocarbon receptor [Meleagris gallopavo]
Length = 911
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 127/214 (59%), Gaps = 11/214 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 288 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 347
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 348 PIGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMMKTGESGMTVFRLLTK 407
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMD--FKVSYLDAGLNNS 404
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M F + +A L
Sbjct: 408 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNMKLPFMFATGEAVLYEV 467
Query: 405 YF---SDSDQLTPSHQTLAPSPGSAQSGSSSTTP 435
F S SD P +T A G S P
Sbjct: 468 TFPMSSLSDASQPRSKTTAGKGGKTALHGDSVDP 501
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 17/72 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA--GISLQ--ECFLQ---------- 619
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA G S+Q F Q
Sbjct: 201 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPAQSADSGPSVQGDNGFSQPANYYSPDQL 259
Query: 620 --ENSYLLERSF 629
ENS +ER+F
Sbjct: 260 PPENSSFMERNF 271
>gi|34850157|dbj|BAC87795.1| Aryl Hydrocarbon Receptor 1 [Phoebastria nigripes]
Length = 861
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 147/274 (53%), Gaps = 28/274 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S + P + N SQ YN D L S E N I +
Sbjct: 171 QRQLHWALNPAQSADSGPSVQGD--NGFSQPATYYNPDQLPPENSSFMERNFICRLRC-- 226
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 227 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQP 274
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY +H D+ Y A
Sbjct: 275 PSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCA 334
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 335 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEH 394
Query: 385 LGKRTMD--FKVSYLDAGLNNSYFSDSDQLTPSH 416
L KR M F + +A L F S + PS
Sbjct: 395 LRKRNMKLPFMFATGEAVLYEVSFPMSSLMDPSQ 428
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 17/72 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA--GISLQ--ECFLQ---------- 619
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA G S+Q F Q
Sbjct: 150 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPAQSADSGPSVQGDNGFSQPATYYNPDQL 208
Query: 620 --ENSYLLERSF 629
ENS +ER+F
Sbjct: 209 PPENSSFMERNF 220
>gi|21165537|dbj|BAB88683.2| aryl hydrocarbon receptor [Phoca sibirica]
Length = 843
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSVLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTACDAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 356 ENRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNM 399
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 17/73 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLP----------------PESAGISLQECF 617
+SD++HQSVYEL+H+EDR E QRQL W + P P++ G +
Sbjct: 149 QSDVIHQSVYELIHTEDRGEFQRQLHW-TLNPSQCTDSGQRIDAANGLPQAVGCHTPDQL 207
Query: 618 LQENSYLLERSFT 630
ENS +ERSF
Sbjct: 208 PPENSSCMERSFV 220
>gi|29337195|sp|P41738.2|AHR_RAT RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|158933889|emb|CAP16662.1| aryl hydrocarbon receptor [Rattus norvegicus]
Length = 853
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHW 174
>gi|149051128|gb|EDM03301.1| rCG61977, isoform CRA_a [Rattus norvegicus]
gi|149051130|gb|EDM03303.1| rCG61977, isoform CRA_a [Rattus norvegicus]
Length = 815
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHW 174
>gi|149051129|gb|EDM03302.1| rCG61977, isoform CRA_b [Rattus norvegicus]
Length = 853
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHW 174
>gi|507172|gb|AAA19451.1| Ah receptor [Rattus norvegicus]
Length = 853
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHW 174
>gi|3561054|gb|AAC35169.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|3561056|gb|AAC35170.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933881|emb|CAP16658.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933883|emb|CAP16659.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933885|emb|CAP16660.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933887|emb|CAP16661.1| aryl hydrocarbon receptor [Rattus norvegicus]
Length = 815
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHW 174
>gi|51870521|emb|CAH25391.1| aryl hydrocarbon receptor [Rattus norvegicus]
Length = 844
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 226 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 285
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 286 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 345
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 346 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 389
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 139 QSDVIHQSVYELIHTEDRAEFQRQLHW 165
>gi|145207984|ref|NP_037281.2| aryl hydrocarbon receptor precursor [Rattus norvegicus]
gi|510269|gb|AAA56897.1| Ah receptor [Rattus norvegicus]
Length = 853
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHW 174
>gi|3561052|gb|AAC35168.1| aryl hydrocarbon receptor [Rattus norvegicus]
gi|158933879|emb|CAP16657.1| aryl hydrocarbon receptor [Rattus norvegicus]
Length = 810
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHW 174
>gi|449270999|gb|EMC81635.1| Aryl hydrocarbon receptor, partial [Columba livia]
Length = 843
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 218 MNFQGRLKFLHGQNKKGKDGTTLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 277
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 278 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMMKTGESGMTVFRLLTK 337
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMD--FKVSYLDAGLNNS 404
+ W WLQ ++RLVYKN +PD++I+T RPL +EEG + L KR M F + +A L
Sbjct: 338 ENRWAWLQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNMKLPFMFATGEAVLYEV 397
Query: 405 YFSDSDQLTPSH 416
F S + PS
Sbjct: 398 SFPVSSLMDPSQ 409
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 17/72 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA--GISLQ--ECFLQ---------- 619
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA G S+Q F Q
Sbjct: 131 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPAQSADSGPSIQGDNGFSQPDTYYNPEQL 189
Query: 620 --ENSYLLERSF 629
ENS +ER+F
Sbjct: 190 PPENSSFMERNF 201
>gi|149051131|gb|EDM03304.1| rCG61977, isoform CRA_c [Rattus norvegicus]
Length = 810
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHW 174
>gi|38194176|dbj|BAD01477.1| aryl hydrocarbon receptor 1 [Phalacrocorax carbo]
Length = 860
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 154/293 (52%), Gaps = 31/293 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S + P + N SQ YN D L S E N I +
Sbjct: 171 QRQLHWALNPAQSADSGPSVQGD--NGFSQPATYYNPDQLPPENSSFMERNFICRLRC-- 226
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 227 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQP 274
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY VH D+ Y A
Sbjct: 275 PSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCA 334
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 335 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEH 394
Query: 385 LGKRTMD--FKVSYLDAGLNNSYFSDSDQLTPSHQTLAPSPGSAQSGSSSTTP 435
L KR M F + +A L F S + P+ + G G+ +T P
Sbjct: 395 LRKRNMKLPFMFATGEAVLYEVSFPMSSLMDPTQLKNKSTTG---KGAKATLP 444
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 17/72 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA--GISLQ--ECFLQ---------- 619
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA G S+Q F Q
Sbjct: 150 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPAQSADSGPSVQGDNGFSQPATYYNPDQL 208
Query: 620 --ENSYLLERSF 629
ENS +ER+F
Sbjct: 209 PPENSSFMERNF 220
>gi|346227234|ref|NP_001230919.1| aryl hydrocarbon receptor [Cricetulus griseus]
gi|27348124|dbj|BAC45237.1| Ah receptor [Cricetulus griseus]
Length = 941
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGTLLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGM +R
Sbjct: 296 PIGCDAKGQLVLGYTEVELCTRGSGYQFIHAADMLYCAESHVRMIKTGESGMTVFRLLAK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 356 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 399
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 30/84 (35%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN-----------------------------SFL 604
+SD++HQSVYEL+H+EDR E QRQL W L
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPAQCTDSAQAGDEAPGLWQPPAVHFNPEQL 207
Query: 605 PPESAGISLQECFLQENSYLLERS 628
PPESA L+ CF+ LL+ S
Sbjct: 208 PPESASF-LERCFICRLRCLLDNS 230
>gi|328943218|gb|ADI24458.2| aryl hydrocarbon receptor 1*2 [Coturnix japonica]
Length = 859
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 137/246 (55%), Gaps = 26/246 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S + P + N SQ YN D L S E N I +
Sbjct: 170 QRQLHWALNPAQSAYSGPSVQGD--NGFSQPANYYNPDQLPPENSSFMERNFICRLRC-- 225
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 226 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQP 273
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY VH D+ Y A
Sbjct: 274 PSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCA 333
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 334 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEH 393
Query: 385 LGKRTM 390
L KR M
Sbjct: 394 LRKRNM 399
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 17/72 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA--GISLQ--ECFLQ---------- 619
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA G S+Q F Q
Sbjct: 149 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPAQSAYSGPSVQGDNGFSQPANYYNPDQL 207
Query: 620 --ENSYLLERSF 629
ENS +ER+F
Sbjct: 208 PPENSSFMERNF 219
>gi|328943216|gb|ADI24459.2| aryl hydrocarbon receptor 1*1 [Coturnix japonica]
Length = 857
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 137/246 (55%), Gaps = 26/246 (10%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGENKWKE 210
Q L W NP++S + P + N SQ YN D L S E N I +
Sbjct: 170 QRQLHWALNPAQSAYSGPSVQGD--NGFSQPANYYNPDQLPPENSSFMERNFICRLRC-- 225
Query: 211 SPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGP 265
++ S + + N +GR+K LHGQN+K ++ P LALFA+ TP P
Sbjct: 226 ---LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQP 273
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
PS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY VH D+ Y A
Sbjct: 274 PSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCA 333
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
H ++KTG SGM +R T + W W+Q ++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 334 ENHVRMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEH 393
Query: 385 LGKRTM 390
L KR M
Sbjct: 394 LRKRNM 399
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 17/72 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA--GISLQ--ECFLQ---------- 619
+SDI+HQSV+EL+H+EDR E QRQL W + P +SA G S+Q F Q
Sbjct: 149 QSDIIHQSVFELIHTEDRPEFQRQLHW-ALNPAQSAYSGPSVQGDNGFSQPANYYNPDQL 207
Query: 620 --ENSYLLERSF 629
ENS +ER+F
Sbjct: 208 PPENSSFMERNF 219
>gi|15528541|dbj|BAB64569.1| aryl hydrocarbon receptor [Phoca vitulina]
Length = 843
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSVLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+I +R T
Sbjct: 296 PTACDAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGLIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 356 ENRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNM 399
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 17/73 (23%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLP----------------PESAGISLQECF 617
+SD++HQSVYEL+H+EDR E QRQL W + P P++ G +
Sbjct: 149 QSDVIHQSVYELIHTEDRGEFQRQLHW-TLNPSQCTDSGQRIDAANGLPQAVGCHTPDQL 207
Query: 618 LQENSYLLERSFT 630
ENS +ERSF
Sbjct: 208 PPENSSCMERSFV 220
>gi|126723509|ref|NP_001075674.1| aryl hydrocarbon receptor [Oryctolagus cuniculus]
gi|25089567|sp|O02747.1|AHR_RABIT RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR
gi|2094756|dbj|BAA19930.1| Ah receptor [Oryctolagus cuniculus]
Length = 847
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 8/208 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKFLHGQNKKGKDGSLLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SG+ +R T
Sbjct: 295 PTGCDAKGQIVLGYTEAELCMRGSGYQFIHAADMLYCAESHIRMIKTGESGLAVFRLLTK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
D W W+Q+++R +YKN +PDF+I+T RPL +EEGR+ L KR K+ ++ +
Sbjct: 355 DNRWAWVQSNARFIYKNGRPDFIIATQRPLTDEEGREHLLKRNT--KLPFMFTTGEAVLY 412
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
+ P L P S G S T
Sbjct: 413 EMTSPFPPIMDPLPIRPKSGTCGKDSAT 440
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQLHW 175
>gi|83817011|ref|NP_001033048.1| aryl hydrocarbon receptor 1B [Takifugu rubripes]
gi|68349473|gb|AAY96630.1| aryl hydrocarbon receptor 1B [Takifugu rubripes]
Length = 854
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 118/171 (69%), Gaps = 7/171 (4%)
Query: 233 LDIRGRIKILHGQNR-----KLEEPP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L+I+GR+K LHGQ+ K+ PP LALFAI TP PP++LEI + ++F++KHKLD
Sbjct: 231 LNIQGRLKFLHGQHHPQRSSKVSSPPQLALFAIATPLQPPTILEIRTRNMIFRTKHKLDF 290
Query: 287 SLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT 345
+ ++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 291 TPMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLT 350
Query: 346 NDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++++T RPL++EEG + L KR+M ++
Sbjct: 351 KDNRWKWVQANARLVYKNGKPDYIVATQRPLVDEEGGEHLRKRSMHLPFTF 401
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 24/107 (22%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + + + +C T+ + Y ++D++HQSV+E++H+ED++E +
Sbjct: 119 NGFVLVV-----TTEGNIFFCSHTI------RDYLGFHQTDVMHQSVFEMIHTEDQQEFR 167
Query: 596 RQLMWN----SFLPPESAGISLQECFL---------QENSYLLERSF 629
R L W PE+ G S+ L ++NS L+RSF
Sbjct: 168 RNLHWGPDTTPTAEPETDGESVSTSSLLSCDPDQPPRDNSSFLDRSF 214
>gi|297680933|ref|XP_002818226.1| PREDICTED: aryl hydrocarbon receptor isoform 1 [Pongo abelii]
gi|395738695|ref|XP_003777137.1| PREDICTED: aryl hydrocarbon receptor isoform 2 [Pongo abelii]
Length = 850
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGRLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T
Sbjct: 297 PIGCDAKGKIVLGYTEAELCTRGSGYQFLHAADMLYCAESHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR M
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIATQRPLTDEEGTEHLRKRNM 400
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|166092819|gb|ABY82367.1| aryl hydrocarbon receptor 1 [Sparus aurata]
Length = 404
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 116/169 (68%), Gaps = 5/169 (2%)
Query: 233 LDIRGRIKILHGQNRKLEE----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSL 288
L+I+GR+K LHGQ R E P LALFAI TP PP++LEI + ++F++KHKLD +
Sbjct: 44 LNIQGRLKFLHGQMRSDSEGSSPPQLALFAIATPLQPPAILEIRTRNMIFRTKHKLDFTP 103
Query: 289 VSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T D
Sbjct: 104 MACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTKD 163
Query: 348 GGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M ++
Sbjct: 164 NRWKWVQANARLVYKNGKPDYIIATQRPLVDEEGGEHLRKRSMHLPFTF 212
>gi|262189351|gb|ACY30370.1| aryl hydrocarbon receptor 1 beta-like protein [Salmo salar]
Length = 1166
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRK----LEEPP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L ++GR+K L GQN++ ++ PP LALFAI TP PS+LEI K + F++KHKLD +
Sbjct: 232 LSLQGRLKFLRGQNQRQDNGVKAPPQLALFAIATPLQTPSILEIRTKNMTFRTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 292 PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++I+T RPLMEEEG + L KR+M ++
Sbjct: 352 DNLWKWVQANARLVYKNGKPDYIIATQRPLMEEEGGEHLRKRSMHLPFTF 401
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 73/171 (42%), Gaps = 41/171 (23%)
Query: 475 IEYLTPPDAVAAAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFHQYRPYYPEYQPYTV 534
+ YL + A N G SA + + L D+ LP L Q
Sbjct: 70 VSYLRAKNFFTVALKNCSCNGGSADNSK--ATGLEDSWLPEGELLLQ------------A 115
Query: 535 SNGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREEL 594
NGF L +ND Y T+ Q+ G+ ++DI+HQSVYELVH+ED++EL
Sbjct: 116 LNGFVLVI-----TNDGTIFYSSHTI---QDYLGF---HQTDIMHQSVYELVHTEDQQEL 164
Query: 595 QRQLMW--------------NSFLPPESAGISL--QECFLQENSYLLERSF 629
+R L W +S + PES+ E ENS LER+F
Sbjct: 165 RRNLHWALSPPAIVDPLGESSSDVEPESSTTVTYNPEQLPPENSSFLERNF 215
>gi|348518131|ref|XP_003446585.1| PREDICTED: aryl hydrocarbon receptor-like [Oreochromis niloticus]
Length = 840
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 116/171 (67%), Gaps = 7/171 (4%)
Query: 233 LDIRGRIKILHGQNR------KLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L+I+GR+K LHGQ+R + P LALFAI TP PP++LEI + ++F++KHKLD
Sbjct: 234 LNIQGRLKFLHGQSRHQCDSDRTAPPQLALFAIATPLQPPAILEIRTRNMIFRTKHKLDF 293
Query: 287 SLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT 345
+ ++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 294 TPMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLT 353
Query: 346 NDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RL+YKN KPD++I+T RPL +EEG + L KR+M ++
Sbjct: 354 KDNRWKWVQANARLIYKNGKPDYIIATQRPLADEEGGEHLRKRSMHLPFTF 404
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 534 VSNGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREE 593
V NGF L + + +C T+ Q+ G+ ++D++HQSV+EL+H++D++E
Sbjct: 116 VLNGFVLVV-----TAEGIIFFCSHTI---QDYLGF---HQTDVMHQSVFELIHTDDQQE 164
Query: 594 LQRQLMWN---------SFLPPESAGISLQECFLQ--------ENSYLLERSFT 630
+R L W PP+ +S C + ENS LERSF
Sbjct: 165 FKRNLHWALNPPVSLEPPTDPPDGKSVSTSSCLVSYNPEQLPPENSSFLERSFV 218
>gi|224045215|ref|XP_002188964.1| PREDICTED: aryl hydrocarbon receptor [Taeniopygia guttata]
Length = 862
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 297 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMD--FKVSYLDAGLNNS 404
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M F + +A L
Sbjct: 357 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNMKLPFMFATGEAVLYEV 416
Query: 405 YFSDSDQLTPSH 416
F S + PS
Sbjct: 417 SFPMSSLMDPSQ 428
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L ++D Y T+ Q+ G+ +SDI+HQSV+EL+H+EDR E Q
Sbjct: 123 NGFVLVV-----TSDALVFYVSSTI---QDYLGFQ---QSDIIHQSVFELIHTEDRPEFQ 171
Query: 596 RQLMWNSFLPPESAGIS 612
RQL W L P +G S
Sbjct: 172 RQLHWA--LNPAQSGDS 186
>gi|269931465|gb|ACZ54252.1| aryl hydrocarbon receptor, partial [Stenella coeruleoalba]
Length = 662
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 112/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 185 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 244
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 245 PTGCDAKGRIVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 304
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR +
Sbjct: 305 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNL 348
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 71 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 119
Query: 596 RQLMW 600
RQL W
Sbjct: 120 RQLHW 124
>gi|34921320|sp|Q8R4S4.1|AHR_MUSSI RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526639|gb|AAL89734.1|AF405569_1 aryl-hydrocarbon receptor [Mus spicilegus]
Length = 854
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 15/71 (21%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW---------------NSFLPPESAGISLQECFL 618
+SD++HQSVYEL+H+EDR E QRQL W + PP++A +
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVDEAHGPPQAAVYYTPDQLP 207
Query: 619 QENSYLLERSF 629
EN+ +ER F
Sbjct: 208 PENASFMERCF 218
>gi|9188539|dbj|BAA99559.1| arylhydrocarbon receptor [Mesocricetus auratus]
Length = 920
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGTLLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLVLGYTEAELCTRGSGYQFIHAADMLYCAEFHVRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 30/84 (35%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN-----------------------------SFL 604
+SD++HQSVYEL+H+EDR E QRQL W L
Sbjct: 147 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPAQCTDSAQGGDESHGLSQPPAVYFNPDQL 206
Query: 605 PPESAGISLQECFLQENSYLLERS 628
PPESA L+ CF+ LL+ S
Sbjct: 207 PPESASF-LERCFICRLRCLLDNS 229
>gi|9438131|gb|AAF87578.1|AF275721_1 AH receptor [Mesocricetus auratus]
Length = 920
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGTLLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLVLGYTEAELCTRGSGYQFIHAADMLYCAEFHVRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 30/84 (35%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN-----------------------------SFL 604
+SD++HQSVYEL+H+EDR E QRQL W L
Sbjct: 147 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPAQCTDSAQGGDESHGLSQPPAVYFNPDQL 206
Query: 605 PPESAGISLQECFLQENSYLLERS 628
PPESA L+ CF+ LL+ S
Sbjct: 207 PPESASF-LERCFICRLRCLLDNS 229
>gi|34921317|sp|Q8R4S2.1|AHR_MUSSP RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526643|gb|AAL89736.1|AF405571_1 aryl-hydrocarbon receptor [Mus spretus]
Length = 854
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 15/71 (21%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW---------------NSFLPPESAGISLQECFL 618
+SD++HQSVYEL+H+EDR E QRQL W + PP++A +
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVDEAHGPPQAAVYYTPDQLP 207
Query: 619 QENSYLLERSF 629
EN+ +ER F
Sbjct: 208 PENASFMERCF 218
>gi|431908968|gb|ELK12559.1| Aryl hydrocarbon receptor [Pteropus alecto]
Length = 806
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 15/207 (7%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM+ +R
Sbjct: 295 PTGCDAKGKLVLGYTEAELCTKGSGYQFIHAADMLYCAEYHLRMIKTGESGMVVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMD--FKVSYLDAGLNNS 404
W W+Q+++RLVYKN +PD++I+T RPL EEEG + L KR + F + +A L
Sbjct: 355 GNRWTWVQSNARLVYKNGRPDYIIATQRPLTEEEGTEHLRKRNLKLPFMFTTGEAIL--- 411
Query: 405 YFSDSDQLTPSHQTLAPSPGSAQSGSS 431
+ +TP + P P +SG+S
Sbjct: 412 ----YEMITPFPPMVDPLPVGTKSGAS 434
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQLHW 175
>gi|449273278|gb|EMC82822.1| Aryl hydrocarbon receptor, partial [Columba livia]
Length = 519
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+++GR+K LHGQN+K E+ P LALFAI TP PPS+L+I K ++F++KHKLD +
Sbjct: 152 LNLQGRLKFLHGQNKKSEDGSVLPPQLALFAISTPLQPPSILQIRTKNMIFRTKHKLDFT 211
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SG+ +R T
Sbjct: 212 PLACDAKGKIVLGYTEAELRMCGTGYQFVHAADMLYCAENHVRMMKTGESGLTVFRLLTK 271
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q ++RLVYKN KP+++I T RPL++EEG + L KR+M ++
Sbjct: 272 EKRWKWVQANARLVYKNGKPEYIIVTQRPLVDEEGGEHLRKRSMHLPFTF 321
>gi|75048691|sp|Q95LD9.1|AHR_DELLE RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|15625347|gb|AAL04031.1|AF332999_1 aryl hydrocarbon receptor [Delphinapterus leucas]
Length = 845
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 112/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SG+I +R T
Sbjct: 296 PTGCDAKGRIVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGLIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR +
Sbjct: 356 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNL 399
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQLHW 175
>gi|223931236|gb|ACN25080.1| aryl hydrocarbon receptor 1 [Lagopus muta]
Length = 192
Score = 171 bits (433), Expect = 1e-39, Method: Composition-based stats.
Identities = 78/164 (47%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
V D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 86 PVGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|24210861|gb|AAN52083.1| aryl hydrocarbon receptor [Peromyscus maniculatus]
Length = 921
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 111/162 (68%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 VNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGM +R
Sbjct: 296 PIGCDAKGQLVLGYTEVELCTKGSGYQFIHAADMLYCAESHIRMIKTGESGMTVFRLLAK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
W+W+Q+++RL+Y+N +PD++I+T RPL EEEGR+ L KR
Sbjct: 356 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTEEEGREHLQKR 397
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHW 174
>gi|402864032|ref|XP_003896289.1| PREDICTED: aryl hydrocarbon receptor [Papio anubis]
Length = 850
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGRLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SG+I +R T
Sbjct: 297 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGLIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR M
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIATQRPLTDEEGSEHLRKRNM 400
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|187884632|gb|ACD37373.1| aryl hydrocarbon receptor 1 [Meleagris gallopavo]
gi|223931240|gb|ACN25082.1| aryl hydrocarbon receptor 1 [Bonasa umbellus]
gi|223931254|gb|ACN25089.1| aryl hydrocarbon receptor 1 [Lagopus lagopus]
Length = 192
Score = 171 bits (432), Expect = 1e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 86 PIGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|403295604|ref|XP_003938726.1| PREDICTED: aryl hydrocarbon receptor [Saimiri boliviensis
boliviensis]
Length = 848
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 112/162 (69%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGRLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T
Sbjct: 297 PIGCDAKGKIVLGYTEAELCTRGSGYQFLHAADMLYCAESHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR
Sbjct: 357 NNRWAWVQSNARLLYKNGRPDYIIATQRPLTDEEGNEHLRKR 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|355747795|gb|EHH52292.1| Aryl hydrocarbon receptor [Macaca fascicularis]
Length = 809
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGRLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SG+I +R T
Sbjct: 297 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGLIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR M
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIATQRPLTDEEGSEHLRKRNM 400
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|187884630|gb|ACD37372.1| aryl hydrocarbon receptor 1 [Phasianus colchicus]
gi|223931178|gb|ACN25051.1| aryl hydrocarbon receptor 1 [Colinus virginianus]
Length = 192
Score = 171 bits (432), Expect = 1e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGTALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 86 PIGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|68299588|dbj|BAE02824.1| aryl hydrocarbon receptor 1 [Pagrus major]
Length = 846
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 116/169 (68%), Gaps = 5/169 (2%)
Query: 233 LDIRGRIKILHGQNRKLEE----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSL 288
L+I+GR+K LHGQ + E P LALFAI TP PP++LEI + ++F++KHKLD +
Sbjct: 235 LNIQGRLKFLHGQMKSDSEGSSPPQLALFAIATPLQPPAILEIRTRNMIFRTKHKLDFTP 294
Query: 289 VSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T +
Sbjct: 295 MACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTKE 354
Query: 348 GGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W+W+Q ++RLVYKN KPD++I+T RPL++EEG + L KR+M ++
Sbjct: 355 NRWKWVQANARLVYKNGKPDYIIATQRPLVDEEGGEHLRKRSMHLPFTF 403
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 26/96 (27%)
Query: 554 LYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG--- 610
+C T+ Q+ G+ ++D++HQSV+EL+H+ED++E +R L W + PP G
Sbjct: 131 FFCSHTI---QDYLGF---HQTDVMHQSVFELIHTEDQQEFRRNLHW-ALNPPAGLGPPS 183
Query: 611 --------ISLQECFLQ--------ENSYLLERSFT 630
+S C + ENS LER F
Sbjct: 184 DPSTDGESVSTSSCLVSYNPDQLPPENSSFLERGFV 219
>gi|395830854|ref|XP_003788529.1| PREDICTED: aryl hydrocarbon receptor [Otolemur garnettii]
Length = 850
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 109/162 (67%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQRKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY VH D+ Y A +H ++KTG SGMI +R
Sbjct: 295 PTGCDAKGKIVLGYTEEELCTKGSGYQFVHAADMLYCAESHIRMIKTGESGMIVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
W WLQ+++RLVYKN +PD++I+T RPL EEEG + L KR
Sbjct: 355 TNRWTWLQSNARLVYKNGRPDYIIATQRPLTEEEGAEHLRKR 396
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 29/83 (34%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN----------------------------SFLP 605
+SD++HQS+YEL+H+EDR E QRQL W LP
Sbjct: 148 QSDVIHQSMYELIHTEDRAEFQRQLHWALNPSQSADSGQRIDEAHGLPQPGICYNPDLLP 207
Query: 606 PESAGISLQECFLQENSYLLERS 628
PE++ S++ CF+ LL+ S
Sbjct: 208 PENSS-SMERCFICRLRCLLDNS 229
>gi|334303197|gb|AEG75819.1| aryl hydrocarbon receptor [Dromaius novaehollandiae]
Length = 186
Score = 170 bits (431), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 18 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 77
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 78 PTGCDAKGKLVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMMKTGESGMTVFRLLTK 137
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 138 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 181
>gi|194209694|ref|XP_001496597.2| PREDICTED: aryl hydrocarbon receptor [Equus caballus]
Length = 947
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 129/214 (60%), Gaps = 8/214 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 341 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 400
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G ++LGY++ EL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 401 PIGCDAKGTIILGYTEAELCMRGSGYQFVHAADMLYCAEYHLRMIKTGESGMTVFRLLTK 460
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
+ W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR++ K+ ++ A +
Sbjct: 461 ENRWAWVQSNARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRSL--KLPFMFATGEAVLY 518
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNR 440
+ P L + SG S T +N+
Sbjct: 519 ELASPFPPVMDPLPLRSKNGASGRDSATKSTLNQ 552
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 227 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 275
Query: 596 RQLMW 600
RQL W
Sbjct: 276 RQLHW 280
>gi|345329324|ref|XP_001514645.2| PREDICTED: aryl hydrocarbon receptor-like [Ornithorhynchus
anatinus]
Length = 806
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 259 MNFQGRLKFLHGQNKKGKDGTAIAPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 318
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGYS+ EL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 319 PTGCDAKGKIVLGYSEAELCVRGSGYQFVHAADMLYCAENHIRMIKTGESGMTVFRLLTK 378
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR +
Sbjct: 379 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGMEHLRKRNL 422
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSV+EL+H+EDR E Q
Sbjct: 145 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVFELIHTEDRPEFQ 193
Query: 596 RQLMW 600
RQL W
Sbjct: 194 RQLHW 198
>gi|426355558|ref|XP_004045184.1| PREDICTED: aryl hydrocarbon receptor [Gorilla gorilla gorilla]
Length = 850
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +G++K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+S D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T
Sbjct: 297 PISCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIATQRPLTDEEGTEHLRKR 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|296209529|ref|XP_002751575.1| PREDICTED: aryl hydrocarbon receptor [Callithrix jacchus]
Length = 850
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 112/162 (69%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGRLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T
Sbjct: 297 PIGCDAKGRIVLGYTEAELCTRGSGYQFLHAADMLYCAESHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR
Sbjct: 357 NNRWAWVQSNARLLYKNGRPDYIIATQRPLTDEEGNEHLRKR 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|223931266|gb|ACN25095.1| aryl hydrocarbon receptor 1 [Sturnus vulgaris]
gi|223931272|gb|ACN25098.1| aryl hydrocarbon receptor 1 [Archilochus colubris]
Length = 192
Score = 169 bits (429), Expect = 3e-39, Method: Composition-based stats.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 86 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++IST RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIISTQRPLTDEEGAEHLRKRNM 189
>gi|34921326|sp|Q8R4S7.1|AHR_MUSCR RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526629|gb|AAL89729.1|AF405564_1 aryl-hydrocarbon receptor [Mus caroli]
Length = 854
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 112/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PSGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 15/71 (21%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW---------------NSFLPPESAGISLQECFL 618
+SD++HQSVYEL+H+EDR E QRQL W + PP++A +
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVDEAHGPPQTAVYYTPDQLP 207
Query: 619 QENSYLLERSF 629
EN+ +ER F
Sbjct: 208 PENASFMERCF 218
>gi|344270614|ref|XP_003407139.1| PREDICTED: aryl hydrocarbon receptor-like [Loxodonta africana]
Length = 847
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 296 PTGCDAKGRIILGYTEAELCMRGSGYQFLHAADMLYCAENHIRMIKTGESGMTVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q+++R+VYKN +PD++I+T RPL +EEG + L KR+M
Sbjct: 356 ENRWTWVQSNARIVYKNGRPDYIIATQRPLTDEEGAEHLRKRSM 399
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQLHW 175
>gi|187884625|gb|ACD37370.1| aryl hydrocarbon receptor 1 [Coturnix japonica]
gi|223931202|gb|ACN25063.1| aryl hydrocarbon receptor 1 [Ardea herodias]
Length = 192
Score = 169 bits (429), Expect = 3e-39, Method: Composition-based stats.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 86 PTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCAENHVRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|7304873|ref|NP_038492.1| aryl hydrocarbon receptor [Mus musculus]
gi|19526627|gb|AAL89728.1|AF405563_1 aryl-hydrocarbon receptor [Mus musculus]
gi|1215804|dbj|BAA07469.1| arylhydrocarbon receptor [Mus musculus]
gi|74148892|dbj|BAE32140.1| unnamed protein product [Mus musculus]
gi|157169880|gb|AAI52974.1| Aryl-hydrocarbon receptor [synthetic construct]
gi|162317858|gb|AAI56630.1| Aryl-hydrocarbon receptor [synthetic construct]
Length = 805
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADILHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|34921322|sp|Q8R4S5.1|AHR_MUSMM RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526637|gb|AAL89733.1|AF405568_1 aryl-hydrocarbon receptor [Mus musculus molossinus]
Length = 883
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|192101|gb|AAA02896.1| Ah-receptor [Mus musculus]
Length = 805
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADILHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|223931208|gb|ACN25066.1| aryl hydrocarbon receptor 1 [Dumetella carolinensis]
Length = 192
Score = 169 bits (428), Expect = 4e-39, Method: Composition-based stats.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 86 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++IST RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIISTQRPLTDEEGAEHLRKRNM 189
>gi|1094268|prf||2105366A aryl hydrocarbon receptor
Length = 805
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADILHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|403180742|gb|AFR24093.1| aryl hydrocarbon receptor 2a [Squalus acanthias]
Length = 1139
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 111/170 (65%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR++ LHGQN+K E+ P LALFA+ TP PPS+LE+ K ++F++KHKLD +
Sbjct: 243 LNFQGRLRFLHGQNKKAEDGAPIPPQLALFAVATPLQPPSILEVRTKTLIFQTKHKLDFT 302
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK +LGY++TEL G GY +H D+ Y A H +++KTG SGM +R T
Sbjct: 303 PLACDTKGKFVLGYTETELCMRGTGYQFIHAADMMYCADNHVKMIKTGESGMTVFRLLTK 362
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W W+Q+++RLVY+ +PD +I RPL EEG + L KR M ++
Sbjct: 363 QSSWVWVQSNARLVYRGGRPDSIICRQRPLTNEEGEEHLRKRIMQLPFNF 412
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD+VHQSV+EL+H++DR RQL W
Sbjct: 153 QSDVVHQSVFELIHTDDRPMFHRQLHW 179
>gi|396950358|gb|AFN89851.1| aryl hydrocarbon receptor, partial [Accipiter striatus]
Length = 173
Score = 169 bits (428), Expect = 4e-39, Method: Composition-based stats.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 4 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 63
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 64 PTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCAENHVRMMKTGESGMTVFRLLTK 123
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 124 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 167
>gi|187884616|gb|ACD37366.1| aryl hydrocarbon receptor 1 [Falco sparverius]
gi|187884621|gb|ACD37368.1| aryl hydrocarbon receptor 1 [Phalacrocorax auritus]
gi|223931162|gb|ACN25043.1| aryl hydrocarbon receptor 1 [Haliaeetus leucocephalus]
gi|223931168|gb|ACN25046.1| aryl hydrocarbon receptor 1 [Strix varia]
gi|223931170|gb|ACN25047.1| aryl hydrocarbon receptor 1 [Megaceryle alcyon]
gi|223931190|gb|ACN25057.1| aryl hydrocarbon receptor 1 [Colaptes auratus]
gi|223931194|gb|ACN25059.1| aryl hydrocarbon receptor 1 [Gavia immer]
gi|223931198|gb|ACN25061.1| aryl hydrocarbon receptor 1 [Picoides pubescens]
gi|223931200|gb|ACN25062.1| aryl hydrocarbon receptor 1 [Tyrannus tyrannus]
gi|223931204|gb|ACN25064.1| aryl hydrocarbon receptor 1 [Bubo virginianus]
gi|223931218|gb|ACN25071.1| aryl hydrocarbon receptor 1 [Charadrius vociferus]
gi|223931224|gb|ACN25074.1| aryl hydrocarbon receptor 1 [Pandion haliaetus]
gi|223931230|gb|ACN25077.1| aryl hydrocarbon receptor 1 [Buteo jamaicensis]
gi|223931234|gb|ACN25079.1| aryl hydrocarbon receptor 1 [Larus delawarensis]
gi|223931242|gb|ACN25083.1| aryl hydrocarbon receptor 1 [Megascops asio]
gi|223931248|gb|ACN25086.1| aryl hydrocarbon receptor 1 [Uria lomvia]
gi|223931260|gb|ACN25092.1| aryl hydrocarbon receptor 1 [Grus canadensis]
gi|223931264|gb|ACN25094.1| aryl hydrocarbon receptor 1 [Cathartes aura]
gi|223931270|gb|ACN25097.1| aryl hydrocarbon receptor 1 [Pagophila eburnea]
gi|300791265|gb|ADK34049.1| aryl hydrocarbon receptor 1 [Larus argentatus]
gi|300791267|gb|ADK34050.1| aryl hydrocarbon receptor 1 [Pagophila eburnea]
gi|309751868|gb|ADO84692.1| aryl hydrocarbon receptor 1 [Sterna paradisaea]
Length = 192
Score = 169 bits (428), Expect = 4e-39, Method: Composition-based stats.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 86 PTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCAENHVRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|187884618|gb|ACD37367.1| aryl hydrocarbon receptor 1 [Somateria mollissima]
gi|187884627|gb|ACD37371.1| aryl hydrocarbon receptor 1 [Anas platyrhynchos]
gi|187884634|gb|ACD37374.1| aryl hydrocarbon receptor 1 [Aix sponsa]
gi|223931182|gb|ACN25053.1| aryl hydrocarbon receptor 1 [Branta canadensis]
gi|223931206|gb|ACN25065.1| aryl hydrocarbon receptor 1 [Aythya marila]
gi|223931256|gb|ACN25090.1| aryl hydrocarbon receptor 1 [Hylocichla mustelina]
gi|223931268|gb|ACN25096.1| aryl hydrocarbon receptor 1 [Branta bernicla]
Length = 192
Score = 169 bits (428), Expect = 4e-39, Method: Composition-based stats.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGTTLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 86 PTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCAENHVRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|50347111|gb|AAT75231.1| aryl hydrocarbon receptor [Mus musculus]
Length = 420
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
+D +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MDFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLFAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 22/105 (20%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 121 NGFVLVV-----TADALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 169
Query: 596 RQLMW-----------NSFLPPESAGISLQECFLQENSYLLERSF 629
RQL W + PP++A + EN+ +ER F
Sbjct: 170 RQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENASFMERCF 214
>gi|157278096|ref|NP_001098148.1| aryl hydrocarbon receptor [Oryzias latipes]
gi|14669838|dbj|BAB62010.1| AHR1 alpha [Oryzias latipes]
gi|14669842|dbj|BAB62012.1| AHR1 alpha [Oryzias latipes]
Length = 879
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 117/172 (68%), Gaps = 8/172 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-------PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
L+I+GR+K LHGQ+R+ + P LALFAI TP PP++LEI K ++F++KHKLD
Sbjct: 232 LNIQGRLKFLHGQSRQPSDSERGSPPPQLALFAIATPLLPPAILEIRTKNMIFRTKHKLD 291
Query: 286 LSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQ 344
+ ++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R
Sbjct: 292 FTPMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLL 351
Query: 345 TNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
T + W+W+Q ++RLVYK+ KPD++I+T RPL EEEG + L KR+M ++
Sbjct: 352 TKENRWKWVQANARLVYKSGKPDYIIATQRPLAEEEGGEHLRKRSMHLPFTF 403
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 26/96 (27%)
Query: 554 LYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISL 613
+C T+ Q+ G+ ++D++HQSV+EL+H+ED++E +R L W + PP S G +
Sbjct: 128 FFCSHTI---QDYLGF---HQTDVMHQSVFELIHTEDQQEFRRNLHW-ALNPPVSTGPPI 180
Query: 614 Q-------------------ECFLQENSYLLERSFT 630
+ E ENS LER+F
Sbjct: 181 EPAGGDLVSSSSPCPVSYNPEQLPPENSSFLERAFV 216
>gi|432936020|ref|XP_004082081.1| PREDICTED: aryl hydrocarbon receptor-like [Oryzias latipes]
Length = 764
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 117/170 (68%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+++GR+K LH QNR+ E P LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 230 LNLQGRLKFLHRQNRQPENGGKRLPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT 289
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ + A H ++KTG SG+ +R T
Sbjct: 290 PTACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLHCAENHVRMIKTGESGLTVFRLLTK 349
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+ W+W+Q+++RLVYKN +PD++I+T RPL++EEG + L KR+M +Y
Sbjct: 350 ENRWKWVQSNARLVYKNGQPDYIIATQRPLLDEEGAEHLRKRSMLLPFTY 399
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 19/76 (25%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQ-------------- 619
++D++HQSVYE+VHSED++EL+R L W PP + Q+ +
Sbjct: 139 QTDVMHQSVYEMVHSEDQQELRRNLHWALNPPPAAESTISQDSHPETAPDSGAASVSYRP 198
Query: 620 -----ENSYLLERSFT 630
ENS LERSF
Sbjct: 199 NQLPPENSSFLERSFV 214
>gi|60729645|pir||JC7993 aryl hydrocarbon receptor - African clawed frog
Length = 834
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 127/210 (60%), Gaps = 13/210 (6%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALF + TP PS+LEI K +F++KHKLD +
Sbjct: 226 MNFQGRLKFLHGQNKKGKDGSILPPQLALFTLATPLQSPSILEIRAKNFIFRTKHKLDFT 285
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G M+LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 286 PIGCDAKGSMVLGYTEAELCVRGTGYQFIHAADMLYCAENHTRMIKTGESGMTVFRLLTR 345
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT--MDFKVSYLDAGLNNS 404
D GW W+Q ++RLVYKN +PD++I++ R L EEEG + L KR+ + F ++ +A L S
Sbjct: 346 DTGWVWVQANARLVYKNGRPDYIIASQRALTEEEGAEHLRKRSGKLPFLLTTGEAVLYES 405
Query: 405 YFSDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
F + +AP+ A S S++
Sbjct: 406 SFP-----LQTIMEVAPTKAKATSAKGSSS 430
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 141 QSDVIHQSVYELIHTEDRLEFQRQLHW 167
>gi|223931164|gb|ACN25044.1| aryl hydrocarbon receptor 1 [Icterus galbula]
gi|223931172|gb|ACN25048.1| aryl hydrocarbon receptor 1 [Mniotilta varia]
gi|223931174|gb|ACN25049.1| aryl hydrocarbon receptor 1 [Poecile atricapilla]
gi|223931180|gb|ACN25052.1| aryl hydrocarbon receptor 1 [Molothrus ater]
gi|223931186|gb|ACN25055.1| aryl hydrocarbon receptor 1 [Spizella passerina]
gi|223931192|gb|ACN25058.1| aryl hydrocarbon receptor 1 [Quiscalus quiscula]
gi|223931196|gb|ACN25060.1| aryl hydrocarbon receptor 1 [Geothlypis trichas]
gi|223931216|gb|ACN25070.1| aryl hydrocarbon receptor 1 [Passerina cyanea]
gi|223931222|gb|ACN25073.1| aryl hydrocarbon receptor 1 [Cardinalis cardinalis]
gi|223931226|gb|ACN25075.1| aryl hydrocarbon receptor 1 [Seiurus aurocapilla]
gi|223931232|gb|ACN25078.1| aryl hydrocarbon receptor 1 [Agelaius phoeniceus]
gi|223931238|gb|ACN25081.1| aryl hydrocarbon receptor 1 [Pheucticus ludovicianus]
gi|223931246|gb|ACN25085.1| aryl hydrocarbon receptor 1 [Melospiza georgiana]
gi|223931262|gb|ACN25093.1| aryl hydrocarbon receptor 1 [Baeolophus bicolor]
Length = 192
Score = 169 bits (427), Expect = 5e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 86 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|14669840|dbj|BAB62011.1| AHR1 beta [Oryzias latipes]
Length = 783
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 117/172 (68%), Gaps = 8/172 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-------PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
L+I+GR+K LHGQ+R+ + P LALFAI TP PP++LEI K ++F++KHKLD
Sbjct: 232 LNIQGRLKFLHGQSRQPSDSERGSPPPQLALFAIATPLLPPAILEIRTKNMIFRTKHKLD 291
Query: 286 LSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQ 344
+ ++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R
Sbjct: 292 FTPMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLL 351
Query: 345 TNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
T + W+W+Q ++RLVYK+ KPD++I+T RPL EEEG + L KR+M ++
Sbjct: 352 TKENRWKWVQANARLVYKSGKPDYIIATQRPLAEEEGGEHLRKRSMHLPFTF 403
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 43/175 (24%)
Query: 475 IEYLTPPDAVAAAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFHQYRPYYPEYQPYTV 534
+ YL + A + G + + + + D ++P L Q
Sbjct: 66 VSYLRTKSFFSVALKDQPPNGVTQQDGGFKAAAAADGQIPEGELLLQ------------A 113
Query: 535 SNGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREEL 594
NGF L + + +C T+ Q+ G+ ++D++HQSV+EL+H+ED++E
Sbjct: 114 LNGFVLVV-----TAEGIIFFCSHTI---QDYLGF---HQTDVMHQSVFELIHTEDQQEF 162
Query: 595 QRQLMWNSFLPPESAGISLQ-------------------ECFLQENSYLLERSFT 630
+R L W + PP S G ++ E ENS LER+F
Sbjct: 163 RRNLHW-ALNPPVSTGPPIEPAGGDLVSSSSPCPVSYNPEQLPPENSSFLERAFV 216
>gi|55275965|gb|AAV49748.1| aryl hydrocarbon receptor 1 beta [Xenopus laevis]
Length = 834
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 127/210 (60%), Gaps = 13/210 (6%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALF + TP PS+LEI K +F++KHKLD +
Sbjct: 226 MNFQGRLKFLHGQNKKGKDGSILPPQLALFTLATPLQSPSILEIRAKNFIFRTKHKLDFT 285
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G M+LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 286 PIGCDAKGSMVLGYTEAELCVRGTGYQFIHAADMLYCAENHTRMIKTGESGMTVFRLLTR 345
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT--MDFKVSYLDAGLNNS 404
D GW W+Q ++RLVYKN +PD++I++ R L EEEG + L KR+ + F ++ +A L S
Sbjct: 346 DTGWVWVQANARLVYKNGRPDYIIASQRALTEEEGAEHLRKRSGKLPFLLTTGEAVLYES 405
Query: 405 YFSDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
F + +AP+ A S S++
Sbjct: 406 SFP-----LQTIMEVAPTKAKATSAKGSSS 430
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 141 QSDVIHQSVYELIHTEDRLEFQRQLHW 167
>gi|148225118|ref|NP_001082693.1| aryl hydrocarbon receptor [Xenopus laevis]
gi|32469276|dbj|BAC79074.1| aryl hydrocarbon receptor [Xenopus laevis]
Length = 834
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 127/210 (60%), Gaps = 13/210 (6%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALF + TP PS+LEI K +F++KHKLD +
Sbjct: 226 MNFQGRLKFLHGQNKKGKDGSILPPQLALFTLATPLQSPSILEIRAKNFIFRTKHKLDFT 285
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G M+LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 286 PIGCDAKGSMVLGYTEAELCVRGTGYQFIHAADMLYCAENHTRMIKTGESGMTVFRLLTR 345
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT--MDFKVSYLDAGLNNS 404
D GW W+Q ++RLVYKN +PD++I++ R L EEEG + L KR+ + F ++ +A L S
Sbjct: 346 DTGWVWVQANARLVYKNGRPDYIIASQRALTEEEGAEHLRKRSGKLPFLLTTGEAVLYES 405
Query: 405 YFSDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
F + +AP+ A S S++
Sbjct: 406 SFP-----LQTIMEVAPTKAKATSAKGSSS 430
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 141 QSDVIHQSVYELIHTEDRLEFQRQLHW 167
>gi|223931220|gb|ACN25072.1| aryl hydrocarbon receptor 1 [Zenaida macroura]
Length = 192
Score = 169 bits (427), Expect = 5e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 86 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|213626945|gb|AAI70445.1| Aryl hydrocarbon receptor [Xenopus laevis]
gi|213626947|gb|AAI70447.1| Aryl hydrocarbon receptor [Xenopus laevis]
Length = 834
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 127/210 (60%), Gaps = 13/210 (6%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALF + TP PS+LEI K +F++KHKLD +
Sbjct: 226 MNFQGRLKFLHGQNKKGKDGSILPPQLALFTLATPLQSPSILEIRAKNFIFRTKHKLDFT 285
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G M+LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 286 PIGCDAKGSMVLGYTEAELCVRGTGYQFIHAADMLYCAENHTRMIKTGESGMTVFRLLTR 345
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT--MDFKVSYLDAGLNNS 404
D GW W+Q ++RLVYKN +PD++I++ R L EEEG + L KR+ + F ++ +A L S
Sbjct: 346 DTGWVWVQANARLVYKNGRPDYIIASQRALTEEEGAEHLRKRSGKLPFLLTTGEAVLYES 405
Query: 405 YFSDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
F + +AP+ A S S++
Sbjct: 406 SFP-----LQTIMEVAPTKAKATSAKGSSS 430
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 141 QSDVIHQSVYELIHTEDRLEFQRQLHW 167
>gi|29337198|sp|P30561.3|AHR_MOUSE RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526621|gb|AAL89725.1|AF405560_1 aryl-hydrocarbon receptor [Mus musculus]
gi|19526623|gb|AAL89726.1|AF405561_1 aryl-hydrocarbon receptor [Mus musculus]
gi|19526625|gb|AAL89727.1|AF405562_1 aryl-hydrocarbon receptor [Mus musculus]
gi|19526633|gb|AAL89731.1|AF405566_1 aryl-hydrocarbon receptor [Mus musculus]
Length = 848
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLFAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|355560780|gb|EHH17466.1| Aryl hydrocarbon receptor [Macaca mulatta]
Length = 809
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 112/162 (69%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGRLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SG+I +R T
Sbjct: 297 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGLIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIATQRPLTDEEGSEHLRKR 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|393191954|gb|AFN06398.1| aryl hydrocarbon receptor, partial [Accipiter cooperii]
Length = 170
Score = 169 bits (427), Expect = 6e-39, Method: Composition-based stats.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 3 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 62
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 63 PTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCAENHVRMMKTGESGMTVFRLLTK 122
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 123 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 166
>gi|332864783|ref|XP_003318385.1| PREDICTED: aryl hydrocarbon receptor [Pan troglodytes]
gi|410227486|gb|JAA10962.1| aryl hydrocarbon receptor [Pan troglodytes]
gi|410260280|gb|JAA18106.1| aryl hydrocarbon receptor [Pan troglodytes]
gi|410307164|gb|JAA32182.1| aryl hydrocarbon receptor [Pan troglodytes]
gi|410335507|gb|JAA36700.1| aryl hydrocarbon receptor [Pan troglodytes]
Length = 850
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 112/162 (69%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +G++K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T
Sbjct: 297 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIATQRPLTDEEGTEHLRKR 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|397509308|ref|XP_003825070.1| PREDICTED: aryl hydrocarbon receptor [Pan paniscus]
Length = 850
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 112/162 (69%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +G++K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T
Sbjct: 297 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIATQRPLTDEEGTEHLRKR 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|187884623|gb|ACD37369.1| aryl hydrocarbon receptor 1 [Sialia sialis]
gi|223931158|gb|ACN25041.1| aryl hydrocarbon receptor 1 [Carduelis tristis]
gi|223931160|gb|ACN25042.1| aryl hydrocarbon receptor 1 [Turdus migratorius]
gi|223931166|gb|ACN25045.1| aryl hydrocarbon receptor 1 [Riparia riparia]
gi|223931176|gb|ACN25050.1| aryl hydrocarbon receptor 1 [Cyanocitta cristata]
gi|223931184|gb|ACN25054.1| aryl hydrocarbon receptor 1 [Bombycilla cedrorum]
gi|223931188|gb|ACN25056.1| aryl hydrocarbon receptor 1 [Petrochelidon pyrrhonota]
gi|223931210|gb|ACN25067.1| aryl hydrocarbon receptor 1 [Carpodacus mexicanus]
gi|223931212|gb|ACN25068.1| aryl hydrocarbon receptor 1 [Passer domesticus]
gi|223931214|gb|ACN25069.1| aryl hydrocarbon receptor 1 [Troglodytes aedon]
gi|223931228|gb|ACN25076.1| aryl hydrocarbon receptor 1 [Vireo olivaceus]
gi|223931250|gb|ACN25087.1| aryl hydrocarbon receptor 1 [Tachycineta bicolor]
gi|223931252|gb|ACN25088.1| aryl hydrocarbon receptor 1 [Sitta carolinensis]
gi|223931258|gb|ACN25091.1| aryl hydrocarbon receptor 1 [Hirundo rustica]
Length = 192
Score = 168 bits (426), Expect = 6e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 86 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|148704916|gb|EDL36863.1| aryl-hydrocarbon receptor [Mus musculus]
Length = 917
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 300 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 359
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 360 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADILHCAESHIRMIKTGESGMTVFRLLAK 419
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 420 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 462
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 217 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 276
Query: 623 YLLERSF 629
+ER F
Sbjct: 277 SFMERCF 283
>gi|386277690|gb|AFJ04419.1| aryl hydrocarbon receptor, partial [Melospiza melodia]
Length = 171
Score = 168 bits (426), Expect = 7e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 3 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 62
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 63 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 122
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 123 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 166
>gi|393191952|gb|AFN06397.1| aryl hydrocarbon receptor, partial [Toxostoma rufum]
Length = 171
Score = 168 bits (426), Expect = 7e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 3 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 62
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 63 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMMKTGESGMTVFRLLTK 122
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 123 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 166
>gi|449506380|ref|XP_002190784.2| PREDICTED: aryl hydrocarbon receptor-like [Taeniopygia guttata]
Length = 847
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+++GR+K LHGQN + E+ P LALFAI TP P S+L+I K ++F++KHKLD +
Sbjct: 228 LNLQGRLKFLHGQNERSEDGSVLPPQLALFAISTPLQPLSILQIRTKNMIFRTKHKLDFT 287
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SG+ +R T
Sbjct: 288 PLACDAKGKVVLGYTEAELRMCGTGYQFVHAADMLYCAENHVRMMKTGESGLTVFRLLTK 347
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KP++++ T RPL++EEG + L KR+M ++
Sbjct: 348 DNCWKWVQANARLVYKNGKPEYIVVTQRPLVDEEGGEHLRKRSMHLPFTF 397
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 14/71 (19%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLP--PES----AGISLQ--------ECFLQ 619
++D++HQSV+EL+H+ED+ E +R L W +P PE AG SL + L
Sbjct: 142 QTDVIHQSVFELIHTEDQPEFRRNLHWALDVPHTPEGELSPAGKSLSSSAVIYKPDQLLP 201
Query: 620 ENSYLLERSFT 630
E+S LERSF
Sbjct: 202 ESSSFLERSFV 212
>gi|393191960|gb|AFN06401.1| aryl hydrocarbon receptor, partial [Zonotrichia albicollis]
Length = 170
Score = 168 bits (426), Expect = 7e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 3 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 62
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 63 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 122
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 123 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 166
>gi|74206832|dbj|BAE33231.1| unnamed protein product [Mus musculus]
Length = 848
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 111/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIVTQRPLTDEEGREHLQKRS 393
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|393191956|gb|AFN06399.1| aryl hydrocarbon receptor, partial [Catharus guttatus]
Length = 171
Score = 168 bits (425), Expect = 8e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 3 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 62
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 63 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 122
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 123 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 166
>gi|19526641|gb|AAL89735.1|AF405570_1 aryl-hydrocarbon receptor [Mus musculus]
Length = 848
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 111/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIVTQRPLTDEEGREHLQKRS 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|19526635|gb|AAL89732.1|AF405567_1 aryl-hydrocarbon receptor [Mus musculus]
gi|13160985|gb|AAK13443.1| aryl-hydrocarbon receptor [Mus musculus]
Length = 848
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 111/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIVTQRPLTDEEGREHLQKRS 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|633821|gb|AAB30431.1| aromatic hydrocarbon receptor, AhR=Ahrd allele product [mice,
DBA/2, D2, Peptide, 848 aa]
Length = 848
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 111/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADILHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIVTQRPLTDEEGREHLQKRS 393
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QR + W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRHVHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|765299|gb|AAB32339.1| arylhydrocarbon receptor, AhR=dioxin-activated transcriptional
factor [mice, DBA/2J, liver, Peptide, 848 aa]
Length = 848
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 111/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIVTQRPLTDEEGREHLQKRS 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|34921324|sp|Q8R4S6.1|AHR_MUSMC RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; Flags: Precursor
gi|19526631|gb|AAL89730.1|AF405565_1 aryl-hydrocarbon receptor [Mus musculus castaneus]
Length = 848
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 111/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIVTQRPLTDEEGREHLQKRS 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|393191958|gb|AFN06400.1| aryl hydrocarbon receptor, partial [Catharus fuscescens]
Length = 170
Score = 168 bits (425), Expect = 9e-39, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 3 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 62
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 63 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 122
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 123 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 166
>gi|297288759|ref|XP_001103903.2| PREDICTED: aryl hydrocarbon receptor [Macaca mulatta]
Length = 877
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 112/162 (69%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 264 MNFQGRLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 323
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SG+I +R T
Sbjct: 324 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGLIVFRLLTK 383
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I+T RPL +EEG + L KR
Sbjct: 384 NNRWTWVQSNARLLYKNGRPDYIIATQRPLTDEEGSEHLRKR 425
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 177 QSDVIHQSVYELIHTEDRAEFQRQLHW 203
>gi|393191948|gb|AFN06395.1| aryl hydrocarbon receptor, partial [Corvus brachyrhynchos]
Length = 175
Score = 168 bits (425), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 7 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 66
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 67 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 126
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 127 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 170
>gi|223931244|gb|ACN25084.1| aryl hydrocarbon receptor 1 [Actitis macularia]
gi|337263465|gb|AEI69353.1| aryl hydrocarbon receptor [Scolopax minor]
Length = 192
Score = 168 bits (425), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGAPLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 86 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMMKTGESGMTVFRLLTK 145
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 146 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 189
>gi|533324|dbj|BAA03857.1| Ah receptor [Homo sapiens]
Length = 808
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 111/162 (68%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +G++K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T
Sbjct: 297 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I T RPL +EEG + L KR
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIVTQRPLTDEEGTEHLRKR 398
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|4502003|ref|NP_001612.1| aryl hydrocarbon receptor precursor [Homo sapiens]
gi|3041653|sp|P35869.2|AHR_HUMAN RecName: Full=Aryl hydrocarbon receptor; Short=Ah receptor;
Short=AhR; AltName: Full=Class E basic helix-loop-helix
protein 76; Short=bHLHe76; Flags: Precursor
gi|416142|gb|AAA16210.1| AH-receptor [Homo sapiens]
gi|46854407|gb|AAH69390.1| Aryl hydrocarbon receptor [Homo sapiens]
gi|47682748|gb|AAH70080.1| AHR protein [Homo sapiens]
gi|51095037|gb|EAL24281.1| aryl hydrocarbon receptor [Homo sapiens]
gi|119614092|gb|EAW93686.1| aryl hydrocarbon receptor, isoform CRA_a [Homo sapiens]
gi|119614093|gb|EAW93687.1| aryl hydrocarbon receptor, isoform CRA_a [Homo sapiens]
gi|168275780|dbj|BAG10610.1| aryl hydrocarbon receptor precursor [synthetic construct]
Length = 848
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 111/162 (68%), Gaps = 6/162 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +G++K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T
Sbjct: 297 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I T RPL +EEG + L KR
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIVTQRPLTDEEGTEHLRKR 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|396950364|gb|AFN89853.1| aryl hydrocarbon receptor, partial [Corvus corax]
Length = 169
Score = 167 bits (424), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 3 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 62
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 63 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 122
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 123 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 166
>gi|83375598|gb|AAC60338.2| aryl hydrocarbon receptor [Petromyzon marinus]
Length = 1076
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 112/170 (65%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L ++GR+K LHGQNR+ L+ LALFA+ TP PS+LEI + ++F++KHKLD +
Sbjct: 247 LQMQGRLKFLHGQNRRSADGSLQPAQLALFAVATPLQSPSILEIRTRNIIFRTKHKLDFT 306
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ ELA G GY +H D+ + A H ++KTG SG+ +R T
Sbjct: 307 PIGCDAKGRIVLGYTELELAMRGTGYQFIHAADMLHCADNHVRMMKTGESGITIFRLLTK 366
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W W+Q ++RLVYKN +PD++I+T RPL EEG + L KR + F ++
Sbjct: 367 GNRWAWVQANARLVYKNGRPDYIIATQRPLSNEEGEEHLRKRALQFPFAF 416
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
+ D+VHQSVYELVHSEDR E RQL W + PP +A
Sbjct: 158 QCDVVHQSVYELVHSEDRYEFLRQLHW-ALKPPPAA 192
>gi|393191950|gb|AFN06396.1| aryl hydrocarbon receptor, partial [Setophaga ruticilla]
Length = 172
Score = 167 bits (423), Expect = 2e-38, Method: Composition-based stats.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 2 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 61
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 62 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHIRMMKTGESGMTVFRLLTK 121
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 122 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRNM 165
>gi|50347109|gb|AAT75230.1| aryl hydrocarbon receptor [Mus musculus]
Length = 420
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLFAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 22/105 (20%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 121 NGFVLVV-----TADALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 169
Query: 596 RQLMW-----------NSFLPPESAGISLQECFLQENSYLLERSF 629
RQL W + PP++A + EN+ +ER F
Sbjct: 170 RQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENASFMERCF 214
>gi|50347103|gb|AAT75227.1| aryl hydrocarbon receptor [Mus musculus]
Length = 420
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLFAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 22/105 (20%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 121 NGFVLVV-----TADALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 169
Query: 596 RQLMW-----------NSFLPPESAGISLQECFLQENSYLLERSF 629
RQL W + PP++A + EN+ +ER F
Sbjct: 170 RQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENASFMERCF 214
>gi|403180744|gb|AFR24094.1| aryl hydrocarbon receptor 3 [Squalus acanthias]
Length = 934
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 109/170 (64%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+I GR+K LHGQN++ E+ P LALFAI TP PS+LEI + +F++KHKLD S
Sbjct: 265 LNIEGRLKYLHGQNKRAEDGTLLPPQLALFAIATPLQVPSILEIRTRSALFQTKHKLDFS 324
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
V+ D + K++LGYS+ EL G GY +H DD+ Y A H L+KTG SGM +R T
Sbjct: 325 PVACDAKAKIVLGYSELELCMRGSGYQFIHADDMLYCADNHVRLMKTGESGMTIFRLLTK 384
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W W+Q ++RLVYKN +PD +I+ R L ++EG D KR M F + +
Sbjct: 385 QNMWIWVQANARLVYKNGQPDCIIAKQRLLTDKEGVDHFQKRAMPFPLPF 434
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMW 600
A + Y ++ ++HQ V+EL+H EDR+E +RQL W
Sbjct: 166 ASHTVQEYVGFHQTALLHQPVFELIHPEDRDEFRRQLHW 204
>gi|395536560|ref|XP_003770282.1| PREDICTED: aryl hydrocarbon receptor-like [Sarcophilus harrisii]
Length = 964
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 116/171 (67%), Gaps = 6/171 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L ++GR+K LHGQN + + P LALFAI TP P S+LEI K + F++KHKLD +
Sbjct: 214 LSLQGRLKPLHGQNHRSKNGSPVPPQLALFAISTPLQPASILEIRTKTLTFRTKHKLDFT 273
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
V+ D +GK++LGY++ EL G GY +H D+ Y A H +++TG SG+ +R T
Sbjct: 274 PVACDAKGKLVLGYTEAELRMRGTGYQFIHAADMLYCAEKHIRMMRTGESGLTVFRLLTK 333
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYL 397
+ W+W+Q+++RLVY+N KPD++I+T RPL++EEG + L KR++ ++L
Sbjct: 334 ENRWRWVQSNARLVYRNGKPDYIIATQRPLVDEEGGEHLQKRSLHHPFTFL 384
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 15/72 (20%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPE---------------SAGISLQECFL 618
++D++HQSV+EL+H+ED+ E +R L W P+ S E
Sbjct: 127 QTDVLHQSVFELIHTEDQPEFRRNLHWKLTSTPKPESDPTCSGETTSSPSGSSDKTEELP 186
Query: 619 QENSYLLERSFT 630
ENS LLERSF
Sbjct: 187 PENSALLERSFV 198
>gi|351711777|gb|EHB14696.1| Aryl hydrocarbon receptor [Heterocephalus glaber]
Length = 863
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 8/214 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
+ +GR+K LHGQN+K ++ P LALFAI TP PS+LEI K ++F++KHKLD +
Sbjct: 254 MKFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQSPSILEIRTKNLIFRTKHKLDFT 313
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D + +++LGY++ EL + G GY VH D+ Y A +H ++KTG SGM +R
Sbjct: 314 PIGCDAKAQIVLGYTEAELCSRGSGYQFVHAGDMLYCAESHIRMMKTGESGMTVFRLLLK 373
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
W W+Q+++R+VYKN +PD++I+T R L +EEGR+ L KR M F + +
Sbjct: 374 HNRWAWIQSNARVVYKNGRPDYIIATVRALTDEEGREHLQKRNMSFPFMFTTG--EAVLY 431
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNR 440
S+ P L S+ SG S T N+
Sbjct: 432 ETSNTFPPMMDPLPIRTKSSTSGQDSATKSTENK 465
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYE +H+EDR E Q
Sbjct: 141 NGFVLAV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYEFIHTEDRAEFQ 189
Query: 596 RQLMW 600
QL W
Sbjct: 190 HQLHW 194
>gi|334349161|ref|XP_003342158.1| PREDICTED: aryl hydrocarbon receptor-like [Monodelphis domestica]
Length = 833
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 113/163 (69%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 242 MNFQGRLKFLHGQNKKGKDGACLAPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 301
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +G+++LGY++ EL G GY ++H D+ Y A +H ++KTG SGM +R T
Sbjct: 302 PTGCDAKGRLVLGYTEAELCMRGSGYQILHAADMLYCADSHIXVIKTGESGMTVFRLLTK 361
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
+ W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR+
Sbjct: 362 ENRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGAEHLRKRS 404
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSV+EL+H+EDR E Q
Sbjct: 128 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVFELIHTEDRAEFQ 176
Query: 596 RQLMWN 601
RQL W
Sbjct: 177 RQLQWT 182
>gi|47571343|gb|AAT35817.1| aryl hydrocarbon receptor [Cavia porcellus]
Length = 846
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 125/208 (60%), Gaps = 8/208 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PS+LE+ K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSVLPPQLALFAIATPLQSPSILELRTKNFLFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A H ++KTG SGM +R T
Sbjct: 296 PIGCDAKGQIVLGYTEAELCAKGSGYQFIHAGDMLHCAEYHMRMIKTGESGMTVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
W W+Q+++R+VYKN +PD++I+T R L +EEGR+ L KR + K+ ++ +
Sbjct: 356 HNRWIWMQSNARVVYKNGRPDYIIATQRALTDEEGREHLRKRGV--KLPFMFTTGEAVLY 413
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
S P +L SA +G S T
Sbjct: 414 ETSKSFPPGMDSLPTQTKSATNGQGSAT 441
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 28/111 (25%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 122 NGFVLAV-----TTDALVFYVSSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 170
Query: 596 RQLMWNSFLPPESA---------------GIS-LQECFLQENSYLLERSFT 630
RQL W +F P + + G+S E ENS L+ER F
Sbjct: 171 RQLHW-AFNPSQCSDSGQAIPEPHGLPQPGVSYTTERLPPENSPLMERCFV 220
>gi|301607501|ref|XP_002933348.1| PREDICTED: aryl hydrocarbon receptor [Xenopus (Silurana)
tropicalis]
Length = 846
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 108/163 (66%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALF + TP PS+LEI K +F++KHKLD +
Sbjct: 230 MNFQGRLKFLHGQNKKGKDGAIIPPQLALFTLATPLQSPSILEIRTKNFIFRTKHKLDFT 289
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G ++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R T
Sbjct: 290 PIGCDTKGSVVLGYTEAELCVRGTGYQFIHAADMLYCADNHIRMIKTGESGMTVFRLLTK 349
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
+ GW W+Q ++RLVYKN +PD++I+T R L EEEG + L KR+
Sbjct: 350 EAGWVWVQANARLVYKNGRPDYIIATQRALTEEEGAEHLRKRS 392
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 16/72 (22%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLP----------PESAGISLQECFL----- 618
+SD++HQSVYEL+H+EDR E QRQL W +F P P+ S C+
Sbjct: 144 QSDVIHQSVYELIHTEDRVEFQRQLHW-AFDPSHPSNSVQRSPDENEFSAIPCYKPEHLP 202
Query: 619 QENSYLLERSFT 630
ENS +ER+F
Sbjct: 203 PENSSFMERNFV 214
>gi|27348120|dbj|BAC45235.1| arylhydrocarbon receptor [Cavia porcellus]
Length = 846
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 125/208 (60%), Gaps = 8/208 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PS+LE+ K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSVLPPQLALFAIATPLQSPSILELRTKNFLFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A H ++KTG SGM +R T
Sbjct: 296 PIGCDAKGQIVLGYTEAELCAKGSGYQFIHAGDMLHCAEYHMRMIKTGESGMTVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
W W+Q+++R+VYKN +PD++I+T R L +EEGR+ L KR + K+ ++ +
Sbjct: 356 HNRWIWMQSNARVVYKNGRPDYIIATQRALTDEEGREHLRKRGV--KLPFMFTTGEAVLY 413
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
S P +L SA +G S T
Sbjct: 414 ETSKSFPPGMDSLPTQTKSATNGQGSAT 441
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 28/111 (25%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 122 NGFVLAV-----TTDALVFYVSSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 170
Query: 596 RQLMWNSFLPPESA---------------GIS-LQECFLQENSYLLERSFT 630
RQL W +F P + + G+S E ENS L+ER F
Sbjct: 171 RQLHW-AFNPSQCSDSGQAIPEPHGLPQPGVSYTTERLPPENSPLMERCFV 220
>gi|290563759|ref|NP_001166525.1| aryl hydrocarbon receptor [Cavia porcellus]
gi|15080956|gb|AAK27312.1| aryl hydrocarbon receptor [Cavia porcellus]
Length = 846
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 125/208 (60%), Gaps = 8/208 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PS+LE+ K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSVLPPQLALFAIATPLQSPSILELRTKNFLFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A H ++KTG SGM +R T
Sbjct: 296 PIGCDAKGQIVLGYTEAELCAKGSGYQFIHAGDMLHCAEYHMRMIKTGESGMTVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
W W+Q+++R+VYKN +PD++I+T R L +EEGR+ L KR + K+ ++ +
Sbjct: 356 HNRWIWMQSNARVVYKNGRPDYIIATQRALTDEEGREHLRKRGV--KLPFMFTTGEAVLY 413
Query: 407 SDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
S P +L SA +G S T
Sbjct: 414 ETSKSFPPGMDSLPTQTKSATNGQGSAT 441
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 28/111 (25%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 122 NGFVLAV-----TTDALVFYVSSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 170
Query: 596 RQLMWNSFLPPESA---------------GIS-LQECFLQENSYLLERSFT 630
RQL W +F P + + G+S E ENS L+ER F
Sbjct: 171 RQLHW-AFNPSQCSDSGQAIPEPHGLPQPGVSYTTERLPPENSPLMERCFV 220
>gi|50347107|gb|AAT75229.1| aryl hydrocarbon receptor [Mus musculus]
Length = 420
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 111/163 (68%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNSQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLRCAESHIRMIKTGESGMTVFRLFAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-----------NSFLPPESAGISLQECFLQENS 622
+SD++HQSVYEL+H+EDR E QRQL W + PP++A + EN+
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENA 207
Query: 623 YLLERSF 629
+ER F
Sbjct: 208 SFMERCF 214
>gi|359051978|gb|AEV12205.1| aryl hydrocarbon receptor 1, partial [Coturnix japonica]
Length = 165
Score = 165 bits (417), Expect = 9e-38, Method: Composition-based stats.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 6/159 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 6 MNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 65
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 66 PTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCAENHVRMMKTGESGMTVFRLLTK 125
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLL 385
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG + L
Sbjct: 126 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAEHL 164
>gi|396950361|gb|AFN89852.1| aryl hydrocarbon receptor, partial [Aegolius acadicus]
Length = 160
Score = 164 bits (415), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/157 (47%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 4 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 63
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 64 PTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADMLYCAENHVRMMKTGESGMTVFRLLTK 123
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRD 383
+ W W+Q ++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 124 ENRWAWVQANARLVYKNGRPDYIIATQRPLTDEEGAE 160
>gi|284813555|ref|NP_001165383.1| aryl hydrocarbon receptor 1a [Xenopus laevis]
gi|55275963|gb|AAV49747.1| aryl hydrocarbon receptor 1 alpha [Xenopus laevis]
Length = 836
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 10/213 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALF + TP PS+LEI K +F++KH+LD +
Sbjct: 224 MNFQGRLKFLHGQNKKGKDGSTLPPQLALFTLATPLQSPSILEIRTKNFIFRTKHRLDFT 283
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G ++LGY++ EL G GY +H D+ Y A H ++KTG SGM +R +
Sbjct: 284 PIGCDAKGSVVLGYTEAELCVRGTGYQFIHAADMLYCAENHVRMIKTGESGMTVFRLLSR 343
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT--MDFKVSYLDAGLNNS 404
D GW W+Q ++RLVYKN +PD++I+ R L EEEG + L KR+ + F + +A L +
Sbjct: 344 DTGWIWVQANARLVYKNGRPDYIIAAQRALTEEEGAEHLRKRSSKLPFLFTTGEAVLYEA 403
Query: 405 YF--SDSDQLTPSHQTLAPSPGSAQSGSSSTTP 435
F ++TP+ + GS+ S P
Sbjct: 404 SFPLQTIMEVTPTKAKTTSAKGSSSKNESPVNP 436
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 15/70 (21%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQE--------CFL-----QE 620
+SD++HQSVYEL+H+EDR E QRQL W P SLQ CF E
Sbjct: 141 QSDVIHQSVYELIHTEDRIEFQRQLHWA--FDPAHPSSSLQRSPDDTALTCFKPEQLPPE 198
Query: 621 NSYLLERSFT 630
NS +ER+F
Sbjct: 199 NSSFMERNFV 208
>gi|410952410|ref|XP_003982873.1| PREDICTED: aryl hydrocarbon receptor [Felis catus]
Length = 858
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTGCDAKGKLVLGYTEAELCMRGSGYQFIHAVDMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRD 383
D W W+Q+++RLVYKN +PD++I+T RPL + D
Sbjct: 356 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTQVHAPD 392
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 19/74 (25%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQE------------CFL--- 618
+SD++HQSVYEL+H+EDR E QRQL W L P S Q C+
Sbjct: 149 QSDVIHQSVYELIHTEDRPEFQRQLHWT--LNPTQCADSGQRIDEANGLPQPAVCYNPDQ 206
Query: 619 --QENSYLLERSFT 630
ENS L+ERSF
Sbjct: 207 LPPENSSLMERSFV 220
>gi|345315165|ref|XP_001513826.2| PREDICTED: hypothetical protein LOC100083243 [Ornithorhynchus
anatinus]
Length = 1147
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 107/170 (62%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K LHGQN++ E+ P LALFAI TP P S+LE+ K +F++KHKLD +
Sbjct: 244 LNFNGRLKFLHGQNKRSEDGSLVPPQLALFAIATPLQPLSILELRTKTFIFQTKHKLDFT 303
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK++LGY++TEL G GY VH D+ Y A H ++KTG SGM +R T
Sbjct: 304 PMACDSRGKVVLGYTETELCMRGSGYQFVHAADMMYCAENHVRMMKTGESGMTVFRLLTK 363
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
GW W+Q ++RLVYK PD +I+ R L EEG + L KR + ++
Sbjct: 364 KTGWVWVQANARLVYKGGHPDCIIARQRALSNEEGEEHLRKRALQLPFNF 413
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 21/76 (27%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPP-------ESAGISLQECFLQ------- 619
+SDI++QSV+EL+H++DR + QL W S PP +S + E L
Sbjct: 153 QSDIIYQSVFELIHTDDRAMFRCQLHW-SLNPPSYSESDQDSGALPRNENLLNSSATTYD 211
Query: 620 ------ENSYLLERSF 629
ENS LERSF
Sbjct: 212 PQHLPPENSSFLERSF 227
>gi|239924050|gb|ACS34985.1| AHR2 protein [Chrysemys picta]
Length = 1035
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 108/166 (65%), Gaps = 6/166 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K+LHGQ ++ E+ P LALFAI TP P S+LE+ K +F++KHKLD +
Sbjct: 240 LNFHGRLKLLHGQQKRTEDGTLRPPQLALFAIATPLQPLSILELRTKTFIFQTKHKLDFT 299
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
V+ D RGK++LGY++TEL G GY VH D+ + A H +++KTG SG+ +R T
Sbjct: 300 PVACDSRGKVVLGYTETELCMRGSGYQFVHAADMMHCAENHVKIMKTGESGITVFRLLTK 359
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDF 392
GW W+Q ++RLVYK +PD +IS R L EEG + L KR++
Sbjct: 360 KAGWLWVQANARLVYKGGQPDCIISRQRALSNEEGEEHLCKRSLQL 405
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPP 606
+SDI++QSV+EL+H++DR Q QL W+ LPP
Sbjct: 152 QSDIIYQSVFELIHTDDRAMFQCQLRWSLNLPP 184
>gi|350588838|ref|XP_003482727.1| PREDICTED: aryl hydrocarbon receptor-like [Sus scrofa]
Length = 385
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 295 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAEYHVRMIKTGESGMIVFRLLTK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPL 376
D W W+Q+++RLVYKN +PD++I+T RPL
Sbjct: 355 DNRWTWVQSNARLVYKNGRPDYIIATQRPL 384
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 122 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 170
Query: 596 RQLMW 600
RQL W
Sbjct: 171 RQLHW 175
>gi|348518213|ref|XP_003446626.1| PREDICTED: aryl hydrocarbon receptor-like [Oreochromis niloticus]
Length = 960
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 109/170 (64%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ RGR+K +HGQNR E+ P LALFAI TP PS+LEI K +MF++KHK+D +
Sbjct: 263 LNFRGRLKFVHGQNRVSEDGSLVPPQLALFAIATPMQQPSILEIRTKTLMFQTKHKMDFT 322
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D R K++LGYS+ E++ G GY+ +H D+ Y A H ++KTG SG+ +R T
Sbjct: 323 PIGVDARAKLVLGYSEIEISRKGSGYNFIHAADMLYCAENHVRMMKTGESGITIFRLLTK 382
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q ++RL+ KN KP+F+++ R L EEG + L R + ++
Sbjct: 383 AGRWVWVQANARLIIKNGKPEFIVAQQRALTNEEGEEQLRLRRLQVPFNF 432
>gi|83817021|ref|NP_001033052.1| aryl hydrocarbon receptor 2B [Takifugu rubripes]
gi|68349477|gb|AAY96632.1| aryl hydrocarbon receptor 2B [Takifugu rubripes]
Length = 981
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 109/170 (64%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K +HGQNR E+ P LALFA+ TP PPS++EI K ++F++KHKLD +
Sbjct: 261 LNFHGRLKFIHGQNRMAEDGTLVHPQLALFAVATPMQPPSIVEIRAKTLIFQTKHKLDFT 320
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGKM+LGY++ EL G GY+ +H D+ Y A H +++KTG SG +R
Sbjct: 321 PMGIDTRGKMVLGYNEVELCMKGSGYNFIHAADMMYCADNHIKMIKTGESGFTVFRLLAK 380
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q ++RLV+K+ KPDF+++ + L EEG + L R + ++
Sbjct: 381 SGSWIWVQANARLVFKDGKPDFIVARQKALTNEEGEEQLHLRRLQLPFNF 430
>gi|190339818|gb|AAI63711.1| Aryl hydrocarbon receptor 2 [Danio rerio]
Length = 1027
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 6/166 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQN+ E+ P LALF I TP PPS+LEI K ++F++KHKLD +
Sbjct: 242 LNFQGRLKYLHGQNKLAEDGTLAHPQLALFIIATPLQPPSILEIRSKTLLFQTKHKLDFT 301
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 302 PMGIDTRGKVVLGYTEIELCMRGSGYQFIHAADMMYCADNHIRMIKTGESGLTVFRLLSK 361
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDF 392
G W W+Q ++RLVYK +PDF+I+ R L EEG + L +R +
Sbjct: 362 GGTWIWVQANARLVYKAGRPDFIIARQRALTNEEGEEHLRQRKLQL 407
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 22/25 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQL 598
+SD+VHQSV+EL+H++DR +RQL
Sbjct: 154 QSDVVHQSVFELIHTDDRAMFRRQL 178
>gi|18858261|ref|NP_571339.1| aryl hydrocarbon receptor 2 [Danio rerio]
gi|4321819|gb|AAD15838.1| aryl hydrocarbon receptor [Danio rerio]
Length = 1027
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 6/166 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQN+ E+ P LALF I TP PPS+LEI K ++F++KHKLD +
Sbjct: 242 LNFQGRLKYLHGQNKLAEDGTLAHPQLALFIIATPLQPPSILEIRSKTLLFQTKHKLDFT 301
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 302 PMGIDTRGKVVLGYTEIELCMRGSGYQFIHAADMMYCADNHIRMIKTGESGLTVFRLLSK 361
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDF 392
G W W+Q ++RLVYK +PDF+I+ R L EEG + L +R +
Sbjct: 362 GGTWIWVQANARLVYKAGRPDFIIARQRALTNEEGEEHLRQRKLQL 407
>gi|312147018|dbj|BAJ33496.1| aryl hydrocarbon receptor 2 [Falco peregrinus]
Length = 291
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
Query: 233 LDIRGRIKILHGQNR-KLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
L+ RGR+K L GQ + L++ PLALFA+ T P S+LE+ K ++F++KHKLD + V+
Sbjct: 120 LNFRGRLKFLLGQQKSALDKSPLALFAVATLLQPLSILELRTKMLIFQTKHKLDFTPVAC 179
Query: 292 DQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGW 350
D RGK++LGY++TEL G GY VH D+ + A H ++KTG SG+ +R T GGW
Sbjct: 180 DSRGKVVLGYTETELCRRGSGYQFVHVADMMHCAENHVRMMKTGESGLTVFRLLTKKGGW 239
Query: 351 QWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W+Q ++RLVYK KPD +I+ R L EEG + L KR + S+
Sbjct: 240 VWVQANARLVYKAGKPDCIIARQRALSNEEGEEHLRKRNLQLPFSF 285
>gi|254728273|gb|ACT79401.1| aryl hydrocarbon receptor 2 [Carassius auratus]
Length = 1025
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 107/169 (63%), Gaps = 6/169 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K LHGQN+ E+ P LALF I TP PPS+LEI K ++F++KHK+D +
Sbjct: 243 LNFHGRLKYLHGQNKLAEDGTLAHPQLALFVIATPLQPPSILEIRSKTLLFQTKHKMDFT 302
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGY++ EL G GY +H D+ + A H ++KTG SG+ +R
Sbjct: 303 PLGVDTRGKVVLGYTEIELCMRGSGYQFIHAADMMHCADNHVRMIKTGESGLTVFRLLMK 362
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVS 395
G W W+Q+++RLVYK +PDF+I+ R L EEG + L +R M S
Sbjct: 363 GGTWIWVQSNARLVYKGGRPDFIIARQRALTNEEGEEHLRQRKMQLPFS 411
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 21/75 (28%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQ-------------- 619
+SD+VHQSV+EL+H++DR +RQL + L P S S +Q
Sbjct: 154 QSDVVHQSVFELIHTDDRAMFRRQLHFA--LNPTSCDGSDASDAIQSSSDITRDMVNYNP 211
Query: 620 -----ENSYLLERSF 629
ENS LERSF
Sbjct: 212 QHIPPENSSFLERSF 226
>gi|395540467|ref|XP_003772176.1| PREDICTED: aryl hydrocarbon receptor-like [Sarcophilus harrisii]
Length = 725
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 246 MNFQGRLKFLHGQNKKGKDGTSLAPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 305
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A +H ++KTG SGM +R T
Sbjct: 306 PTGCDAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAESHIRMIKTGESGMTVFRLLTK 365
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPL 376
+ W W+Q+++RLVYKN +PD++I+T RPL
Sbjct: 366 ENRWTWVQSNARLVYKNGRPDYIIATQRPL 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 15/72 (20%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW--NSFLPPESA-------------GISLQECFL 618
+SD++HQSV+EL+H+EDR E QRQL W N P +SA G E
Sbjct: 159 QSDVIHQSVFELIHTEDRAEFQRQLHWMLNPGQPADSAPQGQEGHGLLQPSGFYNPEQLP 218
Query: 619 QENSYLLERSFT 630
ENS LER F
Sbjct: 219 SENSPFLERCFI 230
>gi|47218576|emb|CAG10275.1| unnamed protein product [Tetraodon nigroviridis]
Length = 640
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 109/170 (64%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K +HGQN+ E+ P LALFAI TP PPS++EI K ++F++KH+LD +
Sbjct: 146 LNFHGRLKFVHGQNQMSEDGALVHPQLALFAIATPMQPPSIVEIRAKTLLFQTKHRLDFT 205
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGY++ EL G GY+ +H D+ Y A H ++KTG SG +R T
Sbjct: 206 PMGIDTRGKIVLGYNEIELCMKGSGYNFIHAADMMYCADNHIRMIKTGESGFTVFRLLTK 265
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q ++RLV+K+ +PDF+++ R L EEG + L R + ++
Sbjct: 266 SGSWVWVQANARLVFKDGRPDFIVARQRALTNEEGEEQLHLRRLQLPFNF 315
>gi|34850159|dbj|BAC87796.1| Aryl Hydrocarbon Receptor 2 [Phoebastria nigripes]
Length = 925
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 105/166 (63%), Gaps = 2/166 (1%)
Query: 233 LDIRGRIKILHGQNRKL-EEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
L+ RGR+K L GQ ++ + PLALFAI TP P S+LE+ K ++F++KHKLD + ++
Sbjct: 234 LNFRGRLKFLLGQQKRASDRSPLALFAIATPLQPLSILELRTKMLIFQTKHKLDFTPMAC 293
Query: 292 DQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGW 350
D RGK++LGY++TEL G GY VH D+ Y A H ++K G SG+ +R T G W
Sbjct: 294 DSRGKVVLGYTETELCRRGSGYQFVHAADMMYCAENHVRMMKMGESGLTVFRLLTKKGSW 353
Query: 351 QWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W+Q ++ LVYK KPD +I+ R L EEG + L KR M S+
Sbjct: 354 VWVQANAWLVYKGGKPDCIIARQRALSNEEGEEHLRKRNMQLPFSF 399
>gi|83817019|ref|NP_001033049.1| aryl hydrocarbon receptor 2A [Takifugu rubripes]
gi|68349475|gb|AAY96631.1| aryl hydrocarbon receptor 2A [Takifugu rubripes]
Length = 912
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQN-----RKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQN R P LALF I P PP ++EI K ++F+SKHKLD +
Sbjct: 231 LSFQGRLKYLHGQNGLRDSRTCSHPQLALFTIAVPVHPPPIVEIRAKMLLFQSKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RG+++LGYS+TEL G GY +H D+ Y A H ++KTG SGM +R +
Sbjct: 291 PMGIDSRGRVVLGYSETELCMKGSGYQFIHAADMMYCADNHLRMIKTGESGMTVFRLLSK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
GW W++ +++L+YK +PDF+I+ R L+ EG + L +R + S+
Sbjct: 351 SSGWVWVKANAKLIYKGGRPDFIIAYQRALVNAEGEEYLRQRRLQLPFSF 400
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 567 KGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQEC---------- 616
K Y +SD+VHQSV+EL+H++DRE ++QL + P E+ Q C
Sbjct: 142 KDYLGFHQSDVVHQSVFELIHTDDRESFRQQLHFALNPPAETDADGRQSCGSAVTYSPDQ 201
Query: 617 FLQENSYLLERSFT 630
ENS LER+F
Sbjct: 202 LPPENSSFLERTFV 215
>gi|148781864|dbj|BAF64245.1| aryl hydrocarbon receptor 2 [Phalacrocorax carbo]
Length = 995
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 121/208 (58%), Gaps = 7/208 (3%)
Query: 233 LDIRGRIKILHGQNRKL-EEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
L+ GR+K L GQ ++ + PL LFAI TP P S+LE+ K ++F++KHKLD + ++
Sbjct: 234 LNFCGRLKCLLGQQKRASDRSPLVLFAIATPLQPLSILELRTKTLIFQTKHKLDFTPMAC 293
Query: 292 DQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGW 350
D GK++LGY++TEL G GY VH D+ Y A H ++KTG SG+ +R T GGW
Sbjct: 294 DAWGKVVLGYTETELCRRGSGYQFVHAADMMYCAENHVRMMKTGESGLTVFRLLTKKGGW 353
Query: 351 QWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSD 410
W+Q ++ LVYK KPDF+I+ R L EEG + L KR + S+ G Y +D
Sbjct: 354 VWVQANAWLVYKGGKPDFIIARQRALSNEEGEEHLRKRNLQLPFSF-ATGEAVLYRNDLP 412
Query: 411 QLTPSHQTLAPSPGSAQSGSSSTTPQRV 438
+ S Q S Q+ + S T QR+
Sbjct: 413 EFLDSFQAKEES----QTQADSCTGQRL 436
>gi|47218575|emb|CAG10274.1| unnamed protein product [Tetraodon nigroviridis]
Length = 338
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 108/165 (65%), Gaps = 4/165 (2%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L+++GR++ L GQ R P ALFAI P PP++LEI + ++F++KHKLD + + D
Sbjct: 110 LNVQGRLRFLPGQPRP---PRPALFAIAAPLQPPAILEIRTRNMIFRTKHKLDFTPTACD 166
Query: 293 QRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
+GK++LGY++ EL G GY +H D+ Y A H +++TG SG+ +R T D W
Sbjct: 167 AKGKLVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIRTGESGLTVFRLLTKDNRWT 226
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W+Q ++RLVYK KPD++++T RPL+EEEG + L KR+ ++
Sbjct: 227 WVQANARLVYKGGKPDYIVATQRPLVEEEGGEHLRKRSEHLPFTF 271
>gi|360045059|emb|CCD82607.1| putative aryl hydrocarbon receptor [Schistosoma mansoni]
Length = 1141
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 35/199 (17%)
Query: 233 LDIRGRIKILHGQNRKLEE-----------------------------------PPLALF 257
L++ GR++ LHGQ R ++ PPL F
Sbjct: 202 LELSGRLQFLHGQARSMQLSVNSEQANSCTNQNISNKYNTSCSYTVSTSNQHNLPPLGFF 261
Query: 258 AICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHY 317
A+C+P GP L P ++ FK+KH+LDL+++++D R +++ YSD++L N YDLVH
Sbjct: 262 AVCSPLGPLPSLNGPQRDATFKTKHQLDLTVITIDARARLIFNYSDSDLQNFKVYDLVHP 321
Query: 318 DDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLM 377
DDL YVA H+EL K G+ G++ +R+ W WLQ+ +L+ KN K D +I HR L
Sbjct: 322 DDLRYVAKGHKELFKVGSLGLLVHRWLNKQSQWIWLQSRIKLIMKNGKQDHIIVIHRQLS 381
Query: 378 EEEGRDLLGKRTMDFKVSY 396
EEG +LL +RT ++K+ +
Sbjct: 382 NEEGMELLIRRTDEYKLPF 400
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 553 KLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
K Y H + + + Y ++DI+HQSV EL+HSEDREE +RQL W S LPPE +
Sbjct: 86 KCYFH-VFSVSKTVEHYLGFHQADILHQSVLELIHSEDREEFRRQLSWRSMLPPEFHSST 144
Query: 613 LQE 615
L E
Sbjct: 145 LHE 147
>gi|185133172|ref|NP_001117015.1| aryl hydrocarbon receptor 2 delta [Salmo salar]
gi|27544855|gb|AAO18424.1| aryl hydrocarbon receptor 2 delta [Salmo salar]
Length = 1107
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 107/170 (62%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNR-----KLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K LHGQN+ ++ P LALF + TP PS+LEI K ++F++KHKLD +
Sbjct: 253 LNFNGRLKYLHGQNKMSDDGTIDHPQLALFVVATPIQTPSILEIRTKTLIFQTKHKLDFT 312
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++D RGK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R
Sbjct: 313 PTNVDTRGKVVLGYTELELCMRGSGYQFIHAADMMYCADNHIRMIKTGESGLTVFRLLAK 372
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+G W W+Q ++RL+YK +PDF++ RPL +EG + L +R + ++
Sbjct: 373 NGVWVWVQANARLIYKGGRPDFIMVRQRPLSNKEGEEQLRQRRLQLPFNF 422
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 22/25 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQL 598
+SD+VHQSV+EL+H++DR +RQL
Sbjct: 161 QSDVVHQSVFELIHTDDRALFRRQL 185
>gi|395536558|ref|XP_003770281.1| PREDICTED: uncharacterized protein LOC100916736 [Sarcophilus
harrisii]
Length = 957
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 104/163 (63%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
LD GR+K L+GQN+K E+ P LALFAI P P S+LE+ K +F++KHKLD +
Sbjct: 203 LDFHGRLKFLYGQNKKAEDGSLMPPQLALFAIAVPLQPLSILELRTKIYIFQTKHKLDFT 262
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK+LLGY++TEL G GY +H D+ Y A H ++K G SGM +R T
Sbjct: 263 PMACDARGKVLLGYTETELCMRGSGYQFIHAADMMYCAEKHVRMMKMGESGMTIFRLLTK 322
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
GW W+Q+++RLVYK +PD +I+ R L EEG + L KR
Sbjct: 323 KAGWLWVQSNARLVYKGGQPDCIIARQRVLSNEEGEEHLHKRA 365
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 14/71 (19%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW------------NSFLPPESAGISLQECF--LQ 619
+SDI++QSV+EL+H++DR + QL W +S P + G ++ E L
Sbjct: 117 QSDIIYQSVFELIHTDDRAMFRCQLHWSLNPPSFREAEQDSSCDPLNNGSTVYELGHPLP 176
Query: 620 ENSYLLERSFT 630
ENS L+RSF
Sbjct: 177 ENSSFLDRSFV 187
>gi|432848765|ref|XP_004066441.1| PREDICTED: uncharacterized protein LOC101174729 [Oryzias latipes]
Length = 902
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 109/170 (64%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNR-----KLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K LHGQNR KL P LALFAI TP P++LEI K ++F++KHKLD +
Sbjct: 244 LNFNGRLKFLHGQNRVSEDGKLVSPQLALFAIATPLQQPAILEIRTKTLLFQTKHKLDFT 303
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGY++ E+ G GY+ +H D+ + A H +++KTG SG +R T
Sbjct: 304 PLGIDGRGKVVLGYNELEICMKGSGYNFIHAADMMHCADNHLKMMKTGESGFTFFRLLTK 363
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q+++R+V+K KP+F+++ R L EEG + L R + ++
Sbjct: 364 MGKWVWVQSNARVVFKGGKPEFIVARQRALTNEEGEEQLRLRRLHLPFNF 413
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 13/69 (18%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW-------NSFLPPESAGISLQ------ECFLQE 620
+SD+VHQSV+EL+H+EDR +RQL + S P SA IS + E
Sbjct: 159 QSDVVHQSVFELIHTEDRALFRRQLHFSLNPNTDGSSSPSTSADISSNIMAYDPQVIPPE 218
Query: 621 NSYLLERSF 629
NS LER+F
Sbjct: 219 NSSFLERNF 227
>gi|37547498|gb|AAN05089.1| aryl hydrocarbon receptor 2 [Sparus aurata]
Length = 525
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 233 LDIRGRIKILHGQ--NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVS 290
L +GR+K +HG+ N EP LALF+I P PP+++EI K ++F+SKHKLD + +
Sbjct: 222 LKFQGRLKYVHGRRVNGTRNEPQLALFSIAMPVQPPTIVEIRAKMLLFQSKHKLDFTPMG 281
Query: 291 MDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGG 349
+D RGK++LGYS+TE+ G GY +H D+ Y A +H ++KTG +G+I +R + GG
Sbjct: 282 IDSRGKVVLGYSETEICMKGSGYQFIHAADMMYCADSHLRMIKTGETGLIVFRLLSKSGG 341
Query: 350 WQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYL--DAGLNN---- 403
W W++++++ +YK +P+F+I+ R L EG + L +R + S+ +A L N
Sbjct: 342 WVWVKSNAKFIYKGGRPEFIIACQRALANAEGEEYLRQRRLQLPFSFATGEAVLYNTGPT 401
Query: 404 ---SYFSDSDQLTPSHQTLAPSPGS 425
+ F +D+ + A SPGS
Sbjct: 402 VDITQFQFNDKFSCHEVPQAESPGS 426
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Query: 567 KGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPE--SAGISLQECFLQ----- 619
K Y +SD+VHQSV+EL+H++DR ++QL + + PP + G LQ C
Sbjct: 132 KDYLGFHQSDVVHQSVFELIHTDDRAFFRQQLHF-ALNPPAAGAGGDVLQGCGSTVMYSP 190
Query: 620 -----ENSYLLERSFT 630
ENS LERSF
Sbjct: 191 EQLPPENSSFLERSFV 206
>gi|185133244|ref|NP_001117723.1| aryl hydrocarbon receptor alpha [Oncorhynchus mykiss]
gi|22134435|gb|AAC95335.2| aryl hydrocarbon receptor alpha [Oncorhynchus mykiss]
Length = 1058
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 104/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILH-----GQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LH G + +P L LF I TP PS+LEI +K + F++KHKLD +
Sbjct: 235 LNFQGRLKFLHCQSMLGDDGTHSQPRLGLFTIATPVHTPSILEIRNKTIFFQTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+D RGK++LGYS+ EL G GY +H D+ Y A +H ++KTG SG+ +R
Sbjct: 295 PTGVDARGKVVLGYSEIELCMRGSGYQFIHAADMMYCADSHVRMIKTGESGLTTFRLLQK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q ++RLVYK +PDF+I+ R L+ EG + L +R M+ S+
Sbjct: 355 TGCWVWVQANARLVYKGGRPDFIIARQRALLNSEGEEHLRQRKMELPFSF 404
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 17/74 (22%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN---SFLPPESAGISLQ--------------EC 616
+SD+VHQSV+EL+H++DR +RQL + PE G + E
Sbjct: 146 QSDVVHQSVFELIHTDDRATFRRQLHFALNPKPFDPEQGGDGMASSSDITRNIVTYNPEQ 205
Query: 617 FLQENSYLLERSFT 630
ENS LER+F
Sbjct: 206 LPPENSSFLERNFV 219
>gi|185133371|ref|NP_001117156.1| aryl hydrocarbon receptor 2 alpha [Salmo salar]
gi|37788920|gb|AAP46168.1| aryl hydrocarbon receptor 2 alpha [Salmo salar]
Length = 1071
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQ-----NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQ + +P L LF I TP PS+LEI K + F++KHKLD +
Sbjct: 235 LNFQGRLKFLHGQSMLGDDGTRSQPRLGLFTIATPVHTPSILEIRTKTIFFQTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R
Sbjct: 295 PTGVDARGKVVLGYSEIELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q ++RLVYK +PDF+I+ R L+ EG + L +R M S+
Sbjct: 355 TGCWVWVQANARLVYKGGRPDFIIARQRALLNSEGEENLRQRKMQLPFSF 404
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 17/74 (22%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN---SFLPPESAGISLQ--------------EC 616
+SD+VHQSV+EL+H++DR +RQL + PE G + E
Sbjct: 146 QSDVVHQSVFELIHTDDRATFRRQLHFALNPKPFDPEQGGDGMASSSDITRNIVTYNPEQ 205
Query: 617 FLQENSYLLERSFT 630
ENS LER+F
Sbjct: 206 LPPENSSFLERNFV 219
>gi|262189346|gb|ACY30365.1| aryl hydrocarbon receptor 2 alpha [Salmo salar]
Length = 988
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQ-----NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQ + +P L LF I TP PS+LEI K + F++KHKLD +
Sbjct: 152 LNFQGRLKFLHGQSMLGDDGTRSQPRLGLFTIATPVHTPSILEIRTKTIFFQTKHKLDFT 211
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R
Sbjct: 212 PTGVDARGKVVLGYSEIELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQK 271
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q ++RLVYK +PDF+I+ R L+ EG + L +R M S+
Sbjct: 272 TGCWVWVQANARLVYKGGRPDFIIARQRALLNSEGEENLRQRKMQLPFSF 321
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 17/74 (22%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN---SFLPPESAGISLQ--------------EC 616
+SD+VHQSV+EL+H++DR +RQL + PE G + E
Sbjct: 63 QSDVVHQSVFELIHTDDRATFRRQLHFALNPKPFDPEQGGDGMASSSDITRNIVTYNPEQ 122
Query: 617 FLQENSYLLERSFT 630
ENS LER+F
Sbjct: 123 LPPENSSFLERNFV 136
>gi|185133306|ref|NP_001117724.1| aryl hydrocarbon receptor beta [Oncorhynchus mykiss]
gi|31982972|gb|AAC95336.4| aryl hydrocarbon receptor beta [Oncorhynchus mykiss]
Length = 1059
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILH-----GQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LH G + +P L LF I TP PS+LEI K + F++KHKLD +
Sbjct: 236 LNFQGRLKFLHAQSMLGDDGTRSQPNLGLFTIATPVQNPSILEIRTKTIFFQTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R
Sbjct: 296 PMGVDARGKVVLGYSEMELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q ++RLVYK +PDF+I+ R L+ EG + L +R M+ S+
Sbjct: 356 TGCWVWVQANARLVYKGGRPDFIIARQRALLNSEGEEHLRQRKMELPFSF 405
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 19/75 (25%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLP----PESAGISLQ--------------E 615
+SD+VHQSV+EL+H++DR +RQL + + P PE G + E
Sbjct: 147 QSDVVHQSVFELIHTDDRATFRRQLHF-ALNPKPFDPEQGGDGMASSSDITRNIVTYNPE 205
Query: 616 CFLQENSYLLERSFT 630
ENS LER+F
Sbjct: 206 QLPPENSSFLERNFV 220
>gi|256086978|ref|XP_002579658.1| aryl hydrocarbon receptor [Schistosoma mansoni]
Length = 449
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 35/199 (17%)
Query: 233 LDIRGRIKILHGQNRKLEE-----------------------------------PPLALF 257
L++ GR++ LHGQ R ++ PPL F
Sbjct: 241 LELSGRLQFLHGQARSMQLSVNSEQANSCTNQNISNKYNTSCSYTVSTSNQHNLPPLGFF 300
Query: 258 AICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHY 317
A+C+P GP L P ++ FK+KH+LDL+++++D R +++ YSD++L N YDLVH
Sbjct: 301 AVCSPLGPLPSLNGPQRDATFKTKHQLDLTVITIDARARLIFNYSDSDLQNFKVYDLVHP 360
Query: 318 DDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLM 377
DDL YVA H+EL K G+ G++ +R+ W WLQ+ +L+ KN K D +I HR L
Sbjct: 361 DDLRYVAKGHKELFKVGSLGLLVHRWLNKQSQWIWLQSRIKLIMKNGKQDHIIVIHRQLS 420
Query: 378 EEEGRDLLGKRTMDFKVSY 396
EEG +LL +RT ++K+ +
Sbjct: 421 NEEGMELLIRRTDEYKLPF 439
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 558 QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQE 615
+ + + + Y ++DI+HQSV EL+HSEDREE +RQL W S LPPE +L E
Sbjct: 129 EVFSVSKTVEHYLGFHQADILHQSVLELIHSEDREEFRRQLSWRSMLPPEFHSSTLHE 186
>gi|254728271|gb|ACT79400.1| aryl hydrocarbon receptor 1 [Carassius auratus]
Length = 815
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 106/170 (62%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K L+GQN + + P LALFA+ P PPS+LEI K FK+KHKLD +
Sbjct: 228 INFQGRLKFLNGQNERTADGKAVPPQLALFALACPLQPPSILEICTKSCFFKTKHKLDFT 287
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ + A H +++TG SG+ +R T
Sbjct: 288 PTACDAKGKIVLGYTEEELCYRGSGYQFIHAADMLHCADNHIRMMRTGDSGLTVFRLLTK 347
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W W+Q+++RLVYKN +PD +I++ R + EEG + L KR M S+
Sbjct: 348 QNIWVWVQSNARLVYKNGQPDCIIASQRVITNEEGEENLRKRAMMLPFSF 397
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYELVH+EDR E QRQL W
Sbjct: 141 QSDLIHQSVYELVHTEDRAEFQRQLHW 167
>gi|118343659|ref|NP_001071651.1| transcription factor protein [Ciona intestinalis]
gi|70568858|dbj|BAE06305.1| transcription factor protein [Ciona intestinalis]
Length = 865
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 110/174 (63%), Gaps = 5/174 (2%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G ++++ GQNR+ E+ P ALF TP PS+LEI K +F++KHKLD +
Sbjct: 244 LHFTGHLRLIPGQNRRGEQNILLPPEQALFLYATPLQSPSILEIRTKNFIFRTKHKLDYT 303
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
+ +D +GK++LGY++ +L GY+ VH D+ + A AH +L++ G SG+ +R +
Sbjct: 304 PLGVDAKGKIVLGYTEQQLRQRSGYEFVHSADMMHCADAHTKLMRKGESGLTVFRLLHKN 363
Query: 348 GGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL 401
W W+ S+RLV++N++PD++ISTHRP+ ++EG + + KRT F+ + +
Sbjct: 364 NKWIWVTASARLVFRNNRPDYIISTHRPIPDQEGEEHMKKRTNAFRFDFTGQAI 417
>gi|334325016|ref|XP_001365696.2| PREDICTED: aryl hydrocarbon receptor-like [Monodelphis domestica]
Length = 595
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 104/163 (63%), Gaps = 6/163 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K LHGQN++ ++ P LALFA+ P P L E+ K F++KHKLD +
Sbjct: 243 LNFHGRLKFLHGQNKRAKDGSFMPPQLALFALAVPLQPLFLQELRTKIYFFQTKHKLDFT 302
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK+LLGY++TEL G GY LVH D+ Y A H +++K G SGM+ +R T
Sbjct: 303 PMACDARGKVLLGYTETELYRTGSGYQLVHAADMMYCAEKHAKIMKIGESGMVIFRLLTK 362
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
GW W+Q+++RL+YK +PD +++ R L EEG + L KR
Sbjct: 363 KAGWLWVQSNARLMYKGGRPDCIVARQRVLSNEEGEEHLHKRA 405
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 19/76 (25%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN----SFLPPESAGISLQE-----------CFL 618
+SDI++QS++EL+H++DR QL W+ SF E SL E C
Sbjct: 152 QSDIIYQSIFELIHTDDRTTFHHQLHWSLKPTSFREAEQDSRSLPENESPLNSGTTTCDP 211
Query: 619 Q----ENSYLLERSFT 630
Q ENS LERSF
Sbjct: 212 QHLPPENSSFLERSFV 227
>gi|351721917|ref|NP_571103.2| aryl hydrocarbon receptor 1 [Danio rerio]
Length = 787
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 15/210 (7%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K L+GQN + P LALFA+ P PPS+LEI K +MFK+K+KLD +
Sbjct: 224 VNFQGRLKFLYGQNESTADGKRIPPQLALFALACPLQPPSILEIRTKNLMFKTKYKLDFT 283
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +LGY++ EL N G GY +H D+ Y A H +++TG +G+ +R T
Sbjct: 284 PIACDTNWNFVLGYTEAELCNSGSGYQFIHAADMMYCAEGHMRMMRTGETGLTVFRLLTK 343
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYL--DAGLNNS 404
W W+Q++ +LVYKN +PD +I++HR + EEG + L R M S+ DA L
Sbjct: 344 QNRWVWVQSNGKLVYKNGQPDCIITSHRVITAEEGEENLRNRAMMLPFSFTTGDAVL--- 400
Query: 405 YFSDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
P+ APS G+ Q ++ T
Sbjct: 401 ----CAMNCPTSSDPAPSDGNTQPKTTRTV 426
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 13/78 (16%)
Query: 565 NSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSF--LPPESAGI------SLQEC 616
N + Y +SD++HQSVYEL+H+EDR E QRQL W + P+S + + + C
Sbjct: 130 NIEDYLGFHQSDVIHQSVYELIHTEDRHEFQRQLHWALYPGFTPDSRQLVQASPDASRTC 189
Query: 617 F-----LQENSYLLERSF 629
+ ENS LER+F
Sbjct: 190 YSPEQLSLENSTCLERNF 207
>gi|19919068|gb|AAM08127.1|AF258854_1 aryl hydrocarbon receptor type 1 [Danio rerio]
Length = 805
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 15/210 (7%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K L+GQN + P LALFA+ P PPS+LEI K +MFK+K+KLD +
Sbjct: 242 VNFQGRLKFLYGQNESTADGKRIPPQLALFALACPLQPPSILEIRTKNLMFKTKYKLDFT 301
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +LGY++ EL N G GY +H D+ Y A H +++TG +G+ +R T
Sbjct: 302 PIACDTNWNFVLGYTEAELCNSGSGYQFIHAADMMYCAEGHMRMMRTGETGLTVFRLLTK 361
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYL--DAGLNNS 404
W W+Q++ +LVYKN +PD +I++HR + EEG + L R M S+ DA L
Sbjct: 362 QNRWVWVQSNGKLVYKNGQPDCIITSHRVITAEEGEENLRNRAMMLPFSFTTGDAVL--- 418
Query: 405 YFSDSDQLTPSHQTLAPSPGSAQSGSSSTT 434
P+ APS G+ Q ++ T
Sbjct: 419 ----CAMNCPTSSDPAPSDGNTQPKTTRTV 444
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 13/78 (16%)
Query: 565 NSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSF--LPPESAGI------SLQEC 616
N + Y +SD++HQSVYEL+H+EDR E QRQL W + P+S + + + C
Sbjct: 148 NIEDYLGFHQSDVIHQSVYELIHTEDRHEFQRQLHWALYPGFTPDSRQLVQASPDASRTC 207
Query: 617 F-----LQENSYLLERSF 629
+ ENS LER+F
Sbjct: 208 YSPEQLSLENSTCLERNF 225
>gi|185133926|ref|NP_001117037.1| aryl hydrocarbon receptor 2 gamma [Salmo salar]
gi|27657682|gb|AAL12247.1| aryl hydrocarbon receptor 2 gamma [Salmo salar]
Length = 1106
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 106/170 (62%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNR-----KLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K LHGQN+ ++ P LALF + TP PS+LEI K ++F++KHKLD +
Sbjct: 253 LNFNGRLKYLHGQNKMSDDGTIDHPQLALFLVATPIQTPSILEIRTKTLIFQTKHKLDFT 312
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++D RGK++LGY++ EL G GY +H D+ + A H ++KTG +G+ +R
Sbjct: 313 PTNVDTRGKVVLGYTELELCMRGSGYQFIHAADMMHCADNHIRMIKTGETGLTVFRLLAK 372
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+G W W+Q ++RL+YK +PDF++ RPL EG + L +R + ++
Sbjct: 373 NGVWIWVQANARLIYKGGRPDFIMVRQRPLSNNEGEEHLRQRRLQLPFNF 422
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 22/25 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQL 598
+SD+VHQSV+EL+H++DR +RQL
Sbjct: 161 QSDVVHQSVFELIHTDDRALFRRQL 185
>gi|68299590|dbj|BAE02825.1| aryl hydrocarbon receptor 2 [Pagrus major]
Length = 990
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 107/167 (64%), Gaps = 3/167 (1%)
Query: 233 LDIRGRIKILHGQ--NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVS 290
L +GR+K +HG N +P LALF+I P PP+++EI K ++F++KHKLD + +
Sbjct: 232 LKFQGRLKFVHGHRVNGTCNKPQLALFSIAMPVQPPTIVEIRAKMLLFQTKHKLDFTPMG 291
Query: 291 MDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGG 349
+D RGK++LGYS+ EL G GY +H D+ Y A +H ++KTG +G+I +R +
Sbjct: 292 IDSRGKVVLGYSEVELCMKGSGYQFIHAADMMYCADSHLHMIKTGETGLIVFRLLSKSNR 351
Query: 350 WQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
W W++++++L+YK +P+F+I+ R L+ EG + L +R M S+
Sbjct: 352 WVWVKSNAKLIYKGGRPEFIIAYQRALVNAEGEEYLRQRRMQLPFSF 398
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Query: 567 KGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPE--SAGISLQEC-------- 616
K Y +SD+VHQSV+EL+H++DR ++QL + + PP + G LQ C
Sbjct: 142 KDYLGFHQSDVVHQSVFELIHTDDRALFRQQLHF-ALNPPTAGAGGDVLQGCGNPVMYPP 200
Query: 617 --FLQENSYLLERSFT 630
ENS LERSF
Sbjct: 201 EQLPPENSSFLERSFV 216
>gi|45250077|gb|AAS55735.1| aryl hydrocarbon receptor 2b [Salmo salar]
Length = 942
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILH-----GQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LH G + +P L LF I T PS+LEI K + F++KHKLD +
Sbjct: 119 LNFQGRLKFLHTQSMLGDDGTRNQPNLGLFTIATAVQNPSILEIRTKTIFFQTKHKLDFT 178
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R
Sbjct: 179 PMGVDARGKVVLGYSEMELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQK 238
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q ++RL+YK +PDF+I+ R L+ EG + L +R M S+
Sbjct: 239 TGCWVWVQANARLIYKGGRPDFIIARQRALLNSEGEEHLRQRKMQLPFSF 288
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 19/75 (25%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLP----PESAGISLQ--------------E 615
+SD+VHQSV+EL+H++DR +RQL + + P PE G ++ E
Sbjct: 30 QSDVVHQSVFELIHTDDRAMFRRQLHF-ALNPKPFDPEQGGDGMESSSDITRNIVTYNPE 88
Query: 616 CFLQENSYLLERSFT 630
ENS LER+F
Sbjct: 89 QLPPENSSFLERNFV 103
>gi|185133503|ref|NP_001117028.1| aryl hydrocarbon receptor 2 beta [Salmo salar]
gi|37788922|gb|AAP46169.1| aryl hydrocarbon receptor 2 beta [Salmo salar]
gi|38520881|emb|CAE75591.1| aryl hydrocarbon receptor 2 beta [Salmo salar]
Length = 1058
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILH-----GQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LH G + +P L LF I T PS+LEI K + F++KHKLD +
Sbjct: 235 LNFQGRLKFLHTQSMLGDDGTRNQPNLGLFTIATAVQNPSILEIRTKTIFFQTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R
Sbjct: 295 PMGVDARGKVVLGYSEMELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q ++RL+YK +PDF+I+ R L+ EG + L +R M S+
Sbjct: 355 TGCWVWVQANARLIYKGGRPDFIIARQRALLNSEGEEHLRQRKMQLPFSF 404
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 19/75 (25%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLP----PESAGISLQ--------------E 615
+SD+VHQSV+EL+H++DR +RQL + + P PE G ++ E
Sbjct: 146 QSDVVHQSVFELIHTDDRAMFRRQLHF-ALNPKPFDPEQGGDGMESSSDITRNIVTYNPE 204
Query: 616 CFLQENSYLLERSFT 630
ENS LER+F
Sbjct: 205 QLPPENSSFLERNFV 219
>gi|326922317|ref|XP_003207396.1| PREDICTED: aryl hydrocarbon receptor-like [Meleagris gallopavo]
Length = 832
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 114/190 (60%), Gaps = 7/190 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K+L GQ ++ LE PLALFAI TP P S+LE+ K + F+SKHKLD +
Sbjct: 216 LNFQGRLKLLLGQQKRAADMSLEPLPLALFAIVTPLQPFSILELQTKTLFFQSKHKLDFT 275
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D G+++LGY++ EL + G GY VH D+ Y A +H ++KTG SG +R T
Sbjct: 276 PIACDSWGEVILGYTEEELCSRGSGYQFVHAADMIYCAESHVRVIKTGKSGTTVFRLLTK 335
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
G W WLQ+++ LVYK +PD +I+ + L EEG + L KR + S+ G Y
Sbjct: 336 RGTWVWLQSNAWLVYKGGEPDCIIAQQQVLSNEEGEEHLRKRNLQLPFSFA-TGEAILYG 394
Query: 407 SDSDQLTPSH 416
+SD L H
Sbjct: 395 KNSDFLGSFH 404
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 564 QNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSY 623
QN G+ +SD+++QS+YEL+H +DR QL+ +AG +C E S
Sbjct: 139 QNYLGFR---QSDLIYQSIYELIHEDDRAAFHCQLLSADPDGCSAAGSPSHQC--HECSG 193
Query: 624 LLERSFT 630
+ER+FT
Sbjct: 194 CMERNFT 200
>gi|432936018|ref|XP_004082080.1| PREDICTED: aryl hydrocarbon receptor-like, partial [Oryzias
latipes]
Length = 632
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 105/169 (62%), Gaps = 6/169 (3%)
Query: 233 LDIRGRIKILHGQNRKLE-----EPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQN ++E P LALFAI P PPS++EI K ++FK+KHKLD +
Sbjct: 279 LKFQGRLKYLHGQNLQVESGGCTRPQLALFAIAMPIQPPSIVEIRAKMLLFKTKHKLDFT 338
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+D RGK++LGYS+TEL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 339 PTGVDSRGKIILGYSETELCMKGSGYQFIHAADMMYCADNHIRMIKTGESGLTVFRLLSK 398
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVS 395
GW W++++++L Y +P+F+I+ + L EG + L +R + S
Sbjct: 399 SKGWLWVKSNAKLTYIGGRPEFIIAYQQALTNAEGEEYLRQRRLQLPFS 447
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 567 KGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQ------- 619
K Y +SD+VHQSV+EL+H++DR + QL + PP +A + +
Sbjct: 189 KDYLGFNQSDVVHQSVFELIHTDDRATFREQLHFALNPPPVAADEQIAQGHGATVMYNPD 248
Query: 620 ----ENSYLLERSFT 630
ENS LERSF
Sbjct: 249 QLPPENSSFLERSFV 263
>gi|449273277|gb|EMC82821.1| Aryl hydrocarbon receptor, partial [Columba livia]
Length = 733
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L RGR+K L GQ + L+ PLALFAI TP P S+LE+ K + F++K KLD + + D
Sbjct: 207 LHFRGRLKFLLGQQKALDRSPLALFAIATPLQPLSILELQIKTLRFQAKFKLDFTPTAND 266
Query: 293 QRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
G+ +LGY++ EL + G GY +H DL Y A +H ++KTG +G++++R T G W
Sbjct: 267 FWGQAVLGYTEAELCSRGSGYQFLHVGDLMYCAESHVRMMKTGETGVMSFRLLTKKGNWV 326
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+Q+++ LVYK KPD +I+ +R L EEG + L KR +
Sbjct: 327 WVQSNAWLVYKGGKPDCIIAQNRVLSNEEGEEHLRKRNL 365
>gi|363735784|ref|XP_421887.3| PREDICTED: aryl hydrocarbon receptor-like [Gallus gallus]
Length = 900
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 106/170 (62%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K L GQ ++ LE PLALFAI TPF P S+L++ K + F+SKHKLD +
Sbjct: 232 LNFQGRLKQLLGQQKRASDMSLEPLPLALFAIVTPFQPFSILKLQTKMLFFQSKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D G+++LGY++ EL + G GY VH D+ A +H ++KTG +G +R T
Sbjct: 292 PIACDSWGRVVLGYTEAELCSRGSGYQFVHTADIICCAESHVRVIKTGQTGTTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+G W WLQ ++ LVYK +PD +IS R L EEG + L KR + S+
Sbjct: 352 NGSWVWLQATAWLVYKGDEPDCIISRQRVLSNEEGEEHLRKRNLQLPFSF 401
>gi|207667154|gb|ACI25085.1| aromatic hydrocarbon receptor [Microgadus tomcod]
Length = 1102
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLE-----EPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQ+ + + LALF+I P PS+LEI K ++F++KH+LD +
Sbjct: 230 LKFQGRLKYLHGQSMMSDDGTRVQSQLALFSIAVPVQTPSILEIRAKTLIFQTKHQLDFT 289
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 290 PMGIDNRGKVVLGYSELELCMRGSGYQFIHAADMMYCADNHLRMIKTGESGLTVFRLLSK 349
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
GW W+Q +++LVYK +PDF+I+ R L+ EG + L +R + S+
Sbjct: 350 SSGWVWVQANAKLVYKGGRPDFIIARQRALVNAEGEEHLRQRRLQLPFSF 399
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 15/72 (20%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN---SFLPPESAG--ISLQ----------ECFL 618
+SD+VHQSVYEL+H++DR + QL + E G ++LQ E
Sbjct: 143 QSDVVHQSVYELIHTDDRAMFREQLHFALNPKLYAAEQGGDALALQCNSDQVKYDPERLP 202
Query: 619 QENSYLLERSFT 630
ENS LERSF
Sbjct: 203 PENSSFLERSFV 214
>gi|207667150|gb|ACI25083.1| aromatic hydrocarbon receptor [Microgadus tomcod]
Length = 1104
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLE-----EPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQ+ + + LALF+I P PS+LEI K ++F++KH+LD +
Sbjct: 230 LKFQGRLKYLHGQSMMSDDGTRVQSQLALFSIAVPVQTPSILEIRAKTLIFQTKHQLDFT 289
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 290 PMGIDNRGKVVLGYSELELCMRGSGYQFIHAADMMYCADNHLRMIKTGESGLTVFRLLSK 349
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
GW W+Q +++LVYK +PDF+I+ R L+ EG + L +R + S+
Sbjct: 350 SSGWVWVQANAKLVYKGGRPDFIIARQRALVNAEGEEHLRQRRLQLPFSF 399
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 15/72 (20%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN---SFLPPESAG--ISLQ----------ECFL 618
+SD+VHQSVYEL+H++DR + QL + E G ++LQ E
Sbjct: 143 QSDVVHQSVYELIHTDDRAMFREQLHFALNPKLYAAEQGGDALALQCNSDQVKYDPERLP 202
Query: 619 QENSYLLERSFT 630
ENS LERSF
Sbjct: 203 PENSSFLERSFV 214
>gi|207667152|gb|ACI25084.1| aromatic hydrocarbon receptor [Microgadus tomcod]
Length = 1104
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLE-----EPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQ+ + + LALF+I P PS+LEI K ++F++KH+LD +
Sbjct: 230 LKFQGRLKYLHGQSMMSDDGTRVQSQLALFSIAVPVQTPSILEIRAKTLIFQTKHQLDFT 289
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 290 PMGIDNRGKVVLGYSELELCMRGSGYQFIHAADMMYCADNHLRMIKTGESGLTVFRLLSK 349
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
GW W+Q +++LVYK +PDF+I+ R L+ EG + L +R + S+
Sbjct: 350 SSGWVWVQANAKLVYKGGRPDFIIARQRALVNAEGEEHLRQRRLQLPFSF 399
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 15/72 (20%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN---SFLPPESAG--ISLQ----------ECFL 618
+SD+VHQSVYEL+H++DR + QL + E G ++LQ E
Sbjct: 143 QSDVVHQSVYELIHTDDRAMFREQLHFALNPKLYAAEQGGDALALQCNSDQVKYDPERLP 202
Query: 619 QENSYLLERSFT 630
ENS LERSF
Sbjct: 203 PENSSFLERSFV 214
>gi|410969839|ref|XP_003991399.1| PREDICTED: aryl hydrocarbon receptor-like [Felis catus]
Length = 649
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 112/188 (59%), Gaps = 9/188 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ G +K+L GQN + E+ P L LFAI TP P ++LE+ +K +F++KHKLD +
Sbjct: 242 LNFHGHLKLLPGQNNRPEDGILMSPQLTLFAIATPRQPLTILELQNKTFLFQTKHKLDFT 301
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK++LGY+D+EL G GY +H D+ + A H +++TG SG+ +R T
Sbjct: 302 PIACDSRGKVVLGYTDSELCRKGSGYQFIHAADMMHCAENHVRMMRTGESGLTVFRLLTK 361
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYF 406
GW W+Q+++RLV++ +PD +++ R L EG D L KR + ++ +
Sbjct: 362 QAGWLWVQSNARLVFRGGQPDCIVARQRALTNAEGEDHLRKRALQLPFTFTTG---EAVL 418
Query: 407 SDSDQLTP 414
DS L+P
Sbjct: 419 YDSSPLSP 426
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
+SD+++QSV+EL+H EDR Q Q +W PP++A IS
Sbjct: 141 QSDVIYQSVFELIHKEDRAMFQSQFLW----PPDAAPIS 175
>gi|2944076|gb|AAC05210.1| aromatic hydrocarbon receptor [Microgadus tomcod]
Length = 680
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLE-----EPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQ+ + + LALF+I P PS+LEI K ++F++KH+LD +
Sbjct: 87 LKFQGRLKYLHGQSMMSDDGTRVQSQLALFSIAVPVQTPSILEIRAKTLIFQTKHQLDFT 146
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 147 PMGIDNRGKVVLGYSELELCMRGSGYQFIHAADMMYCADNHLRMIKTGESGLTVFRLLSK 206
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
GW W+Q +++LVYK +PDF+I+ R L+ EG + L +R + S+
Sbjct: 207 SSGWVWVQANAKLVYKGGRPDFIIARQRALVNAEGEEHLRQRRLQLPFSF 256
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 15/71 (21%)
Query: 575 SDIVHQSVYELVHSEDREELQRQLMWN---SFLPPESAG--ISLQ----------ECFLQ 619
SD+VHQSVYEL+H++DR + QL + E G ++LQ E
Sbjct: 1 SDVVHQSVYELIHTDDRAMFREQLHFALNPKLYAAEQGGDALALQCNSDQVKYDPERLPP 60
Query: 620 ENSYLLERSFT 630
ENS LERSF
Sbjct: 61 ENSSFLERSFV 71
>gi|291401037|ref|XP_002716904.1| PREDICTED: AHR2 protein-like [Oryctolagus cuniculus]
Length = 926
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 106/170 (62%), Gaps = 5/170 (2%)
Query: 233 LDIRGRIKILHGQNRK----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSL 288
L+ +G +K L GQN+ L P L LFA+ TP P ++LE+ +K +F++KHKLD +
Sbjct: 343 LNFQGHLKFLPGQNKSENDVLSSPQLTLFAVATPHQPLTILELQNKPFLFQTKHKLDFTP 402
Query: 289 VSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
++ D RGK++LGY+++EL G GY +H D+ Y A H +++TG SG+ +R T
Sbjct: 403 IACDSRGKVILGYTESELCRKGSGYQFIHAADMMYCAENHVRMMRTGESGLTVFRLLTKR 462
Query: 348 GGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYL 397
GW W+Q+++RLV++ +PD +++ R L EG + L RT+ +++
Sbjct: 463 AGWLWVQSNARLVFRGGQPDCIVARQRALTNSEGEEHLHTRTLRLPFTFI 512
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN 601
+SDI++QSVYEL+H EDR Q Q W+
Sbjct: 251 QSDIIYQSVYELIHKEDRAVFQSQFRWH 278
>gi|296490864|tpg|DAA32977.1| TPA: AHR2 protein-like [Bos taurus]
Length = 799
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K L G+N E+ P L LFA+ TP P ++LE+ +K+V F++KHKLD +
Sbjct: 258 LNFHGRLKFLPGKNNSSEDGIPISPQLTLFAVATPRQPLTILELQNKDVFFQTKHKLDFT 317
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK++LGY+D+EL G GY +H D Y A H +++TG SG+ +R T
Sbjct: 318 PIACDSRGKVVLGYTDSELCRQGSGYQFIHVADAMYCAENHARMMRTGESGLTVFRLLTK 377
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
GW W+Q+++ LV++ +PD +++ R L + EG D L KR + ++
Sbjct: 378 RAGWLWVQSNAHLVFRGGQPDCIVARQRALTDVEGEDHLRKRALQGPFTF 427
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 7/54 (12%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSYLLER 627
+SDI++QSV+EL+H EDR Q Q +W PP++ IS E Q++++ L R
Sbjct: 167 QSDIIYQSVFELIHKEDRATFQSQFLW----PPDTTPISRAE---QQDTHSLPR 213
>gi|390353292|ref|XP_780848.3| PREDICTED: uncharacterized protein LOC575350 [Strongylocentrotus
purpuratus]
Length = 1397
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 105/169 (62%), Gaps = 8/169 (4%)
Query: 233 LDIRGRIKILHGQNRK--------LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKL 284
L GR+++L+GQ + ++ P +ALFA+ +P P++LEI + ++F++KHKL
Sbjct: 255 LQFSGRLRMLNGQRTRGKDGIPIDVDPPEMALFALASPLQQPTILEIYVRNMIFRTKHKL 314
Query: 285 DLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQ 344
D V++D +G +LGY+D E ++ GY VHY+D+ Y + H L++ G +G I +R
Sbjct: 315 DFKTVNLDTKGSEVLGYTDMEFKSLPGYQYVHYEDIIYCSEMHSSLIRKGETGFIYFRLM 374
Query: 345 TNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFK 393
+ W W+Q R++YKN KPD+++STHRP+ +EEG L R F+
Sbjct: 375 SKVMKWVWVQAKGRVMYKNGKPDYLVSTHRPMSDEEGDQHLMNRRKPFR 423
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNS 602
++DI+HQ+V+EL+H EDRE+ Q+QL+ S
Sbjct: 170 DADIMHQNVFELIHKEDREDFQKQLLLAS 198
>gi|5733849|gb|AAC05158.2| aromatic hydrocarbon receptor [Microgadus tomcod]
Length = 823
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLE-----EPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQ+ + + LALF+I P PS+LEI K ++F++KH+LD +
Sbjct: 230 LKFQGRLKYLHGQSMMSDDGTRVQSQLALFSIAVPVQTPSILEIRAKTLIFQTKHQLDFT 289
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 290 PMGIDNRGKVVLGYSELELCMRGSGYQFIHAADMMYCADNHLRMIKTGESGLTVFRLLSK 349
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
GW W+Q +++LVYK +PDF+I+ R L+ EG + L +R + S+
Sbjct: 350 SSGWVWVQANAKLVYKGGRPDFIIARQRALVNAEGEEHLRQRRLQLPFSF 399
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 15/72 (20%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWN---SFLPPESAG--ISLQ----------ECFL 618
+SD+VHQSVYEL+H++DR + QL + E G ++LQ E
Sbjct: 143 QSDVVHQSVYELIHTDDRAMFREQLHFALNPKLYAAEQGGDALALQCNSDQVKYDPERLP 202
Query: 619 QENSYLLERSFT 630
ENS LERSF
Sbjct: 203 PENSSFLERSFV 214
>gi|444519553|gb|ELV12868.1| Aryl hydrocarbon receptor [Tupaia chinensis]
Length = 657
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
Query: 260 CTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYD 318
TP PPS+LEI K +F++KHKLD + + D +GK++LGY++ EL G GY +H
Sbjct: 191 ATPLQPPSILEIRTKNFIFRTKHKLDFTPTACDAKGKIVLGYTEAELCTSGSGYQFLHAA 250
Query: 319 DLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLME 378
D+ Y A +H ++KTG SGMI +R T W W+Q+++RLVYKN +PD++I+T RPL E
Sbjct: 251 DMLYCAESHIRMIKTGESGMIVFRLLTKGNRWTWVQSNARLVYKNGRPDYIIATQRPLTE 310
Query: 379 EEGRDLLGKRTM 390
EEG + L KR M
Sbjct: 311 EEGIEHLRKRNM 322
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPE 607
+SD++HQSVYEL+H+EDR E QRQL W + PP+
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQLHW-ALNPPQ 181
>gi|348539806|ref|XP_003457380.1| PREDICTED: aryl hydrocarbon receptor-like [Oreochromis niloticus]
Length = 978
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 104/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQ-----NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQ N P LALF I P PPS++EI K ++F++KHKLD +
Sbjct: 229 LKFQGRLKYLHGQSQLRDNGACHRPQLALFTIAMPVQPPSIVEIRAKMLLFQTKHKLDFT 288
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+D RGK++LGYS+ EL G GY +H D+ + A H +LKTG +G+ +R +
Sbjct: 289 PTGIDSRGKIVLGYSEIELCMKGSGYQFIHAADMMHCADNHIRMLKTGETGLTVFRLLSK 348
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W++++++++YK +P+F+I+ + + EG + L +R++ S+
Sbjct: 349 PGSWVWVKSNAKMIYKGGRPEFIIAYQKAISNAEGEEYLRQRSLQLPFSF 398
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 567 KGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS-LQEC--------- 616
K Y +SD+VHQSV++L+H++DR + QL + + PP +A LQ C
Sbjct: 140 KDYLGFHQSDVVHQSVFDLIHTDDRSTFREQLHF-ALNPPAAADEDVLQSCGNTVMYNPE 198
Query: 617 -FLQENSYLLERSFT 630
ENS LERSF
Sbjct: 199 HLPPENSSFLERSFV 213
>gi|402862083|ref|XP_003895399.1| PREDICTED: uncharacterized protein LOC101003577 [Papio anubis]
Length = 1053
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +G +K L GQN K E+ P L LFA TP P ++LE+ +K +F++KHKLD +
Sbjct: 282 LNFQGHLKFLPGQNTKSEDGTFLSPHLTLFATATPRQPLTILELQNKTFIFQTKHKLDFT 341
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK++LGY+D+EL G GY +H D+ Y A H +++TG SG+ +R T
Sbjct: 342 PIACDSRGKVILGYTDSELCRRGSGYQFIHAADMMYCAENHVRMMRTGESGLTVFRLLTK 401
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q+++RLV++ +P+ +++ R L EG + L KR + ++
Sbjct: 402 QGRWLWVQSNARLVFRGGRPECIVARQRALTNLEGEEHLRKRALQLPFTF 451
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
+SD+++QSV+EL+H EDR Q QL W PP++A +S
Sbjct: 190 QSDVIYQSVFELIHKEDRAMFQSQLRW----PPDTASVS 224
>gi|297287356|ref|XP_002803147.1| PREDICTED: hypothetical protein LOC100423621 [Macaca mulatta]
Length = 1053
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +G +K L GQN K E+ P L LFA TP P ++LE+ +K +F++KHKLD +
Sbjct: 282 LNFQGHLKFLPGQNTKSEDGTFLSPHLTLFATATPRQPLTILELQNKTFIFQTKHKLDFT 341
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK++LGY+D+EL G GY +H D+ Y A H +++TG SG+ +R T
Sbjct: 342 PIACDSRGKVILGYTDSELCRGGSGYQFIHAADMMYCAENHVRMMRTGESGLTVFRLLTK 401
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
G W W+Q+++RLV++ +P+ +++ R L EG + L KR + ++
Sbjct: 402 QGRWLWVQSNARLVFRGGRPECIVARQRALTNLEGEEHLRKRALQLPFTF 451
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
+SD+++QSV+EL+H EDR Q QL W PP++A +S
Sbjct: 190 QSDVIYQSVFELIHKEDRAMFQSQLRW----PPDTASVS 224
>gi|440900488|gb|ELR51615.1| Aryl hydrocarbon receptor [Bos grunniens mutus]
Length = 705
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 107/176 (60%), Gaps = 6/176 (3%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKE 275
++ +N L+ +GR+K L G+N E+ P L LFA+ TP P ++LE+ +K+
Sbjct: 236 FRCLLDNSGFLELNFQGRLKFLPGKNNSSEDGIPISPQLTLFAVATPRQPFTILELQNKD 295
Query: 276 VMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTG 334
V F++KHKLD + ++ D RGK++LGY+D+EL G GY +H D Y A H +++TG
Sbjct: 296 VFFQTKHKLDFTPIACDSRGKVVLGYTDSELRRQGSGYQFIHAADAMYCAENHARMMRTG 355
Query: 335 ASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
SG+ +R T GW W+Q+++ LV+ +P+ +++ R L + EG D L KR +
Sbjct: 356 ESGLTVFRLLTKRAGWLWVQSNAHLVFCGGRPECIVARQRALTDVEGEDHLRKRAL 411
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 7/54 (12%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSYLLER 627
+SD+++QSV+EL+H EDR Q Q +W PP++ IS + Q++++ L R
Sbjct: 157 QSDVIYQSVFELIHKEDRATFQSQFLW----PPDTTPISRAQ---QQDTHSLPR 203
>gi|358342585|dbj|GAA50018.1| aryl hydrocarbon receptor, partial [Clonorchis sinensis]
Length = 1514
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 36/200 (18%)
Query: 233 LDIRGRIKILHGQNRKLEE------------------------------------PPLAL 256
L++ GR++ LHGQ+R + PPL L
Sbjct: 20 LELSGRLQFLHGQSRGKQSGSSLSGAHMIHTASGVRSISKPSSSALAAAACQYSLPPLGL 79
Query: 257 FAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVH 316
F +C+P GP L +++ FK+KH+LDL++ ++D R +ML Y+D +L YDLVH
Sbjct: 80 FVVCSPLGPLPSLNGSQRDMTFKTKHQLDLTVTTIDSRTRMLFSYTDADLQQFKVYDLVH 139
Query: 317 YDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPL 376
+DL YVA H+E+ +TG+ G++ +R+ + W WLQ+ +L+ KN K D +I HR L
Sbjct: 140 PEDLRYVAQGHREVFRTGSVGLLVHRWISKSCEWIWLQSRVKLMVKNGKQDHIIVIHRQL 199
Query: 377 MEEEGRDLLGKRTMDFKVSY 396
E+EG +LL +R+ ++K+ +
Sbjct: 200 SEQEGMELLIRRSDEYKLPF 219
>gi|83817017|ref|NP_001033047.1| aryl hydrocarbon receptor 2C [Takifugu rubripes]
gi|68349479|gb|AAY96633.1| aryl hydrocarbon receptor 2C [Takifugu rubripes]
Length = 818
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
Query: 233 LDIRGRIKILHG-QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
L+ GR+K L R + ALFAI TP PPS+ EI K +F++KH++D + + +
Sbjct: 227 LNFTGRLKRLSLLGTRGADGGTAALFAIATPVEPPSITEIRTKTFIFQTKHRMDFAPMGI 286
Query: 292 DQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGW 350
D RGK++LGYS+TEL G GY +H D+ Y A H +++KTG SG +R T G W
Sbjct: 287 DTRGKLVLGYSETELVTRGSGYQFIHAADMMYCADNHLKMMKTGNSGFTFFRLLTKTGCW 346
Query: 351 QWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLL--GKRTMDFKVSYLDAGLNNSYF 406
W+Q S+R+V+KN +PDF+I+ + L +EG + L +R + F +S D L +++
Sbjct: 347 LWVQASARVVFKNGRPDFIIARQKALTNKEGEEHLHQRRRQLPFNLSPGDGVLYDTWM 404
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW----NSFLPPESAGISLQECFLQ------ENSY 623
+SD+V QSVY LVH +DRE +RQL + +S L ES S L E+S
Sbjct: 145 QSDVVQQSVYNLVHMDDREMFRRQLQFSGGADSDLKAESGSCSNDPVSLLPLNTPPESSS 204
Query: 624 LLERSFT 630
LERSF
Sbjct: 205 FLERSFC 211
>gi|296237809|ref|XP_002763902.1| PREDICTED: aryl hydrocarbon receptor-like [Callithrix jacchus]
Length = 837
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 104/170 (61%), Gaps = 6/170 (3%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +G +K L GQN K E+ P L LFA TP P ++LE+ +K +F++KHKLD +
Sbjct: 232 LNFQGHLKFLPGQNTKSEDGTFLSPQLTLFATATPRQPLTILELQNKTFLFQTKHKLDFT 291
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D RGK++LGY+D+EL G GY +H D+ Y A H +++TG SG+ +R T
Sbjct: 292 PIACDSRGKVILGYTDSELRRRGSGYQFIHAADMMYCAENHVRMMRTGESGLTVFRLLTK 351
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
GW W+Q+++RL+++ +P +++ R L EG + L KR + ++
Sbjct: 352 QAGWLWVQSNARLLFRGGRPACIVARQRALTNLEGEEHLRKRDLQLPFTF 401
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
+SD+++QSV+EL+H EDR Q QL W PP++A +S
Sbjct: 141 QSDVIYQSVFELIHKEDRAMFQSQLRW----PPDTAPVS 175
>gi|21717335|gb|AAC59696.3| aryl hydrocarbon receptor 2 [Fundulus heteroclitus]
Length = 951
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Query: 233 LDIRGRIKILHGQN-----RKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L GR+K L GQN ++ LALFAI P PPS++EI K ++F+++HKLD +
Sbjct: 229 LKFHGRLKYLQGQNLCKDIETCKKVQLALFAIAMPVQPPSIVEIRAKMLLFQTRHKLDFT 288
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+D RGK +LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 289 PTGVDTRGKAILGYTEIELCMKGSGYQFIHAADMMYCADNHIRMIKTGESGLTVFRLLSK 348
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVS 395
GW W++++++L+YK +P+F+I+ + L EG + L +R + S
Sbjct: 349 SNGWVWVKSNAKLIYKEERPEFIIAFQKALTNAEGEEYLRQRRLQLPFS 397
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 567 KGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISL-QECFLQ------ 619
K Y +SD+VHQSV+EL+H++DR + QL + PP ++ Q C
Sbjct: 139 KDYLGFHQSDVVHQSVFELIHTDDRAMFREQLHFALNPPPVASDAEFSQGCAKAVMYNPE 198
Query: 620 ----ENSYLLERSFT 630
++S LERSF
Sbjct: 199 QLPPDSSSFLERSFV 213
>gi|336111702|gb|AEI16511.1| aryl hydrocarbon receptor 2 [Chelon labrosus]
Length = 244
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 233 LDIRGRIKILHGQ-----NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L + GR+K LH N P LALFAI P PPS++EI K ++F++KHKLD +
Sbjct: 77 LXLEGRLKYLHSHSFLXDNGTNNXPQLALFAIAMPVQPPSIVEIRAKMLLFQTKHKLDFT 136
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+D RGK++LG S TEL G GY +H D+ Y A ++KTG SG+ +R
Sbjct: 137 PTGIDGRGKIILGXSQTELCMKGSGYQFIHAADMMYCADNXIRMIKTGESGLTVFRLLXK 196
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDF 392
W W++ +++L+YK +P+F+I+ R L+ G + L +R M
Sbjct: 197 SRSWVWVKANAKLIYKGGRPEFIIAYXRVLVNXXGXEXLXQRXMQL 242
>gi|259019548|gb|ACV90045.1| aryl hydrocarbon receptor [Sus scrofa]
Length = 160
Score = 127 bits (319), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 6/129 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 32 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 91
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 92 PTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAEYHVRMIKTGESGMIVFRLLTK 151
Query: 347 DGGWQWLQT 355
D W W+Q+
Sbjct: 152 DNRWTWVQS 160
>gi|268560320|ref|XP_002646183.1| C. briggsae CBR-AHR-1 protein [Caenorhabditis briggsae]
Length = 641
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 133/252 (52%), Gaps = 14/252 (5%)
Query: 232 RLDIRGRIKILHG------QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
R+D+RG++ LHG R P L + ICTPF PPS ++ ++++ K+KH+LD
Sbjct: 288 RIDMRGKLMSLHGLPTSYVMGRTASGPVLGMICICTPFVPPSTSDLASEDMILKTKHQLD 347
Query: 286 LSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRF-Q 344
SLVSMD + +L D++L M Y+LVH DD +A A +E++K G+SG++ YR
Sbjct: 348 GSLVSMDPKVYEMLEIHDSDLP-MSLYNLVHVDDAVCMAEAQKEVIKNGSSGILVYRLVS 406
Query: 345 TNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR-TMDFK-VSYLDAGLN 402
T ++Q+S RL YKNSKP+ + THR L E EG LL KR ++ K +S+ D+ L
Sbjct: 407 TKTHRVYFVQSSCRLFYKNSKPESIGLTHRLLNEVEGTMLLEKRSSLKAKLLSFDDSFLQ 466
Query: 403 NSYFSDSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNRR--YKTQLRDFLSTCRTKRKMS 460
+ S P T+ P G ++ R NR +K L + T +
Sbjct: 467 SPRNLQSTAALPIPPTIKEEPDGYVPGRNNCI--RSNRSPPFKCTLSSIMLEPSTSTALF 524
Query: 461 AQHAAPPPPTPA 472
+ PP TP+
Sbjct: 525 STLPVPPTNTPS 536
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLP 605
A +N +GY +SDI+HQ VY+L+HSEDR+++++QL N +P
Sbjct: 203 ASENVEGYLGFHQSDILHQPVYDLIHSEDRDDIRQQLDVNFHIP 246
>gi|71981698|ref|NP_001021036.1| Protein AHR-1, isoform a [Caenorhabditis elegans]
gi|74958660|sp|O44712.1|AHR_CAEEL RecName: Full=Aryl hydrocarbon receptor protein 1; Flags: Precursor
gi|2828114|gb|AAC00000.1| aryl hydrocarbon receptor ortholog AHR-1 [Caenorhabditis elegans]
gi|5596639|emb|CAB51463.1| Protein AHR-1, isoform a [Caenorhabditis elegans]
Length = 602
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Query: 232 RLDIRGRIKILHG------QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
R+D+RG++ LHG R P L + +CTPF PPS ++ ++++ K+KH+LD
Sbjct: 235 RIDMRGKLMSLHGLPSSYVMGRTASGPVLGMICVCTPFVPPSTSDLASEDMILKTKHQLD 294
Query: 286 LSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRF-Q 344
+LVSMDQ+ +L +T+L M Y+LVH +D +A AH+E +K G+SG++ YR
Sbjct: 295 GALVSMDQKVYEMLEIDETDLP-MPLYNLVHVEDAVCMAEAHKEAIKNGSSGLLVYRLVS 353
Query: 345 TNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT------MDFKVSYLD 398
T ++Q+S R+ YKNSKP+ + THR L E EG LL KR+ + F S+L
Sbjct: 354 TKTRRTYFVQSSCRMFYKNSKPESIGLTHRLLNEVEGTMLLEKRSTLKAKLLSFDDSFLQ 413
Query: 399 AGLN 402
+ N
Sbjct: 414 SPRN 417
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQEN 621
A +N + Y +SD++HQ VY+L+HSEDR+++++QL N +P SA + F +N
Sbjct: 153 ASENVENYLGFHQSDVLHQPVYDLIHSEDRDDIRQQLDSNFHIPTSSASNQF-DVFAPQN 211
Query: 622 SYLLERS 628
S LER+
Sbjct: 212 SKYLERN 218
>gi|71981705|ref|NP_001021037.1| Protein AHR-1, isoform b [Caenorhabditis elegans]
gi|62553973|emb|CAI79126.1| Protein AHR-1, isoform b [Caenorhabditis elegans]
Length = 560
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Query: 232 RLDIRGRIKILHG------QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
R+D+RG++ LHG R P L + +CTPF PPS ++ ++++ K+KH+LD
Sbjct: 193 RIDMRGKLMSLHGLPSSYVMGRTASGPVLGMICVCTPFVPPSTSDLASEDMILKTKHQLD 252
Query: 286 LSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRF-Q 344
+LVSMDQ+ +L +T+L M Y+LVH +D +A AH+E +K G+SG++ YR
Sbjct: 253 GALVSMDQKVYEMLEIDETDLP-MPLYNLVHVEDAVCMAEAHKEAIKNGSSGLLVYRLVS 311
Query: 345 TNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT------MDFKVSYLD 398
T ++Q+S R+ YKNSKP+ + THR L E EG LL KR+ + F S+L
Sbjct: 312 TKTRRTYFVQSSCRMFYKNSKPESIGLTHRLLNEVEGTMLLEKRSTLKAKLLSFDDSFLQ 371
Query: 399 AGLN 402
+ N
Sbjct: 372 SPRN 375
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQEN 621
A +N + Y +SD++HQ VY+L+HSEDR+++++QL N +P SA + F +N
Sbjct: 111 ASENVENYLGFHQSDVLHQPVYDLIHSEDRDDIRQQLDSNFHIPTSSASNQF-DVFAPQN 169
Query: 622 SYLLERS 628
S LER+
Sbjct: 170 SKYLERN 176
>gi|290760658|gb|ADD59914.1| aryl hydrocarbon receptor, partial [Orcinus orca]
Length = 165
Score = 124 bits (312), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/121 (46%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 271 IPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQE 329
I K +F++KHKLD + D +G+++LGYS+ EL G GY +H D+ Y A H
Sbjct: 1 IRTKNFIFRTKHKLDFTPTGCDAKGRIVLGYSEAELCMRGSGYQFIHAADMLYCAEYHIR 60
Query: 330 LLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
++KTG SGMI +R T D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR
Sbjct: 61 MIKTGESGMIVFRLLTKDNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRN 120
Query: 390 M 390
+
Sbjct: 121 L 121
>gi|308474172|ref|XP_003099308.1| CRE-AHR-1 protein [Caenorhabditis remanei]
gi|308267447|gb|EFP11400.1| CRE-AHR-1 protein [Caenorhabditis remanei]
Length = 631
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 102/165 (61%), Gaps = 8/165 (4%)
Query: 232 RLDIRGRIKILHG------QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
R+D+RG++ LHG R P L + +CTPF PPS ++ ++++ K+KH+LD
Sbjct: 258 RIDMRGKLMSLHGLPSSYVMGRTASGPVLGMVCVCTPFVPPSTSDLASEDMILKTKHQLD 317
Query: 286 LSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT 345
+LVSMDQ+ +L +++L M Y+LVH +D +A AH+E +K G+SG++ YR +
Sbjct: 318 GALVSMDQKVYEMLEIDESDLP-MNLYNLVHVEDAVCMAEAHKEAIKNGSSGLLVYRLVS 376
Query: 346 NDGGWQW-LQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
+ +Q+S RL YKNSKP+ + THR L E EG LL KR+
Sbjct: 377 LKSQRTYFVQSSCRLFYKNSKPESIGLTHRLLNEVEGTMLLEKRS 421
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQEN 621
A +N +GY +SDI+HQ VY+L+HSEDR+++++QL N +P ++ + F +N
Sbjct: 176 ASENVEGYLGFHQSDILHQPVYDLIHSEDRDDIRQQLDSNFHIPTSTSSTPF-DIFSPQN 234
Query: 622 SYLLERS 628
S L+R+
Sbjct: 235 SKYLDRN 241
>gi|341895366|gb|EGT51301.1| hypothetical protein CAEBREN_23937 [Caenorhabditis brenneri]
Length = 575
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 129/235 (54%), Gaps = 27/235 (11%)
Query: 232 RLDIRGRIKILHGQ------NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
R+D+RG++ LHG R P L + +CTPF PPS ++ ++++ K+KH+LD
Sbjct: 197 RIDMRGKLMSLHGLPSSYVLGRSTSGPVLGMICVCTPFVPPSTSDLASEDMILKTKHQLD 256
Query: 286 LSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT 345
+LVSMD + +L D++L + Y+++H +D +A AH+E++K G+SG++ YR +
Sbjct: 257 GTLVSMDSKVYEMLEIDDSDLP-LSMYNIIHVEDAVCMAEAHKEVIKNGSSGLLVYRLIS 315
Query: 346 NDGGWQ-WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT------MDFKVSYLD 398
+ ++Q+S RL+ KNSKP+ + THR L E EG LL KR+ + F S+L
Sbjct: 316 SKTHRPYYVQSSCRLICKNSKPESIGFTHRLLNEVEGVMLLEKRSSLKAKLLSFDDSFLQ 375
Query: 399 AGLNNSYFS----------DSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYK 443
+ N + D D L PS T + S S +T+P + +RR K
Sbjct: 376 SPRNLQSTAALPLPVLLKDDQDGLEPSTST---ALFSTLSIPPTTSPTKSSRRRK 427
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQ---ECFL 618
A +N +G+ +SDI+HQ V++L+HSEDRE++++QL N +P S+ S + F
Sbjct: 111 ASENVEGFLGFHQSDILHQPVFDLIHSEDREDIRQQLDTNFHIPTSSSASSSSTTFDIFA 170
Query: 619 QENSYLLERS 628
+NS LER+
Sbjct: 171 PQNSKYLERN 180
>gi|341898498|gb|EGT54433.1| CBN-AHR-1 protein [Caenorhabditis brenneri]
Length = 553
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 129/235 (54%), Gaps = 27/235 (11%)
Query: 232 RLDIRGRIKILHGQ------NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
R+D+RG++ LHG R P L + +CTPF PPS ++ ++++ K+KH+LD
Sbjct: 175 RIDMRGKLMSLHGLPSSYVLGRSTSGPVLGMICVCTPFVPPSTSDLASEDMILKTKHQLD 234
Query: 286 LSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT 345
+LVSMD + +L D++L + Y+++H +D +A AH+E++K G+SG++ YR +
Sbjct: 235 GTLVSMDSKVYEMLEIDDSDLP-LSLYNIIHVEDAVCMAEAHKEVIKNGSSGLLVYRLIS 293
Query: 346 NDGGWQ-WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT------MDFKVSYLD 398
+ ++Q+S RL+ KNSKP+ + THR L E EG LL KR+ + F S+L
Sbjct: 294 SKTHRPYYVQSSCRLICKNSKPESIGFTHRLLNEVEGVMLLEKRSSLKAKLLSFDDSFLQ 353
Query: 399 AGLNNSYFS----------DSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYK 443
+ N + D D L PS T + S S +T+P + +RR K
Sbjct: 354 SPRNLQSTAALPLPVLLKDDQDGLEPSTST---ALFSTLSIPPTTSPTKSSRRRK 405
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQ---ECFL 618
A +N +G+ +SDI+HQ V++L+HSEDRE++++QL N +P S+ S + F
Sbjct: 89 ASENVEGFLGFHQSDILHQPVFDLIHSEDREDIRQQLDTNFHIPTSSSASSSSTTFDIFA 148
Query: 619 QENSYLLERS 628
+NS LER+
Sbjct: 149 PQNSKYLERN 158
>gi|21429802|gb|AAM50579.1| AT29177p [Drosophila melanogaster]
Length = 512
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 112/200 (56%), Gaps = 49/200 (24%)
Query: 377 MEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQL------TPSHQTLAPSPGSAQSGS 430
M+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQL +P+ L P
Sbjct: 1 MDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQLVVPPSTSPTAHALPP--------- 51
Query: 431 SSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPP-----------PTPAPPIEYL- 478
TP R NRRYKTQLRDFLSTCR+KRK+ Q+ P PA +EYL
Sbjct: 52 -PVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQNQPQTQQTSPLGGQVGSPAPAVAVEYLP 110
Query: 479 TPPDAVAAAYSN---MYTTGYSATTPE--YMSQSLYDNRL--PYENLFHQYR------PY 525
P AVAAAYSN MYTT A+ + YM S+ N ENLFHQYR Y
Sbjct: 111 DPAAAVAAAYSNLNPMYTTSPYASAADNLYMGSSMPANAFYPVSENLFHQYRLQGAVGGY 170
Query: 526 YPEYQPYT-------VSNGF 538
Y +Y P++ V+NGF
Sbjct: 171 YTDY-PHSGAPASAYVANGF 189
>gi|38520879|emb|CAE75590.1| aryl hydrocarbon receptor 2 alpha [Salmo salar]
Length = 365
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 6/131 (4%)
Query: 233 LDIRGRIKILHGQ-----NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQ + +P L LF I TP PS+LEI K + F++KHKLD +
Sbjct: 235 LNFQGRLKFLHGQSMLGDDGTRSQPRLGLFTIATPVHTPSILEIRTKTIFFQTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+D RGK++LGYS+ EL G GY +H D+ Y A H ++KTG SG+ +R
Sbjct: 295 PTGVDARGKVVLGYSEIELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQK 354
Query: 347 DGGWQWLQTSS 357
G W W+Q ++
Sbjct: 355 TGCWVWVQANA 365
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 23/27 (85%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD+VHQSV+EL+H++DR +RQL +
Sbjct: 146 QSDVVHQSVFELIHTDDRATFRRQLHF 172
>gi|170580690|ref|XP_001895368.1| aryl hydrocarbon receptor AHR-1 [Brugia malayi]
gi|158597714|gb|EDP35784.1| aryl hydrocarbon receptor AHR-1, putative [Brugia malayi]
Length = 239
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 13/170 (7%)
Query: 232 RLDIRGRIKILHG----------QNRKLEEPPLALFAICTPFGPPSLLEIPHKEV-MFKS 280
R+D+RG++ LHG +N L L A+C+PF PP++ + + + K+
Sbjct: 24 RIDVRGKLMSLHGLPNSYVLNRIENHSSGNMVLGLVAVCSPFVPPNVADQQQMDDPILKT 83
Query: 281 KHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIA 340
KH LD +LVS D + K LL D L Y+LVH DD +A AH+E+ K ASG++
Sbjct: 84 KHSLDFTLVSTDNQMKALLELDDKNLP-YSFYNLVHVDDATCIAEAHKEVTKNSASGILI 142
Query: 341 YRF-QTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
YR W+Q+S R+ YKN KP+ + THR L E EG L KRT
Sbjct: 143 YRLISIXSQRVYWIQSSCRMFYKNGKPETIGLTHRLLTEVEGMMLFEKRT 192
>gi|304561304|gb|ADM43598.1| AHR1 [Trachemys scripta]
Length = 348
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 75/112 (66%), Gaps = 6/112 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGRLKFLHGQNKKGKDGSPVSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGM 338
+ D +GK++LGY++ EL G GY VH D+ Y A H ++KTG SGM
Sbjct: 297 PIGCDAKGKIVLGYTEEELCMRGTGYQFVHAADMLYCAENHIRMIKTGESGM 348
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SDI+HQSV+EL+H+EDR E QRQL W
Sbjct: 150 QSDIIHQSVFELIHTEDRPEFQRQLHW 176
>gi|332206653|ref|XP_003252413.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor [Nomascus
leucogenys]
Length = 809
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 295 GKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWL 353
GK++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T + W W+
Sbjct: 263 GKIVLGYTEAELCTRGSGYQFLHAADMLYCAESHIRMIKTGESGMIVFRLLTKNNRWTWV 322
Query: 354 QTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
Q+++RL+YKN +PD++I+T RPL +EEG + L KR M
Sbjct: 323 QSNARLLYKNGRPDYIIATQRPLTDEEGTEHLRKRNM 359
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
+SD++HQSVYEL+H+EDR E QRQL W
Sbjct: 150 QSDVIHQSVYELIHTEDRAEFQRQLHW 176
>gi|118419965|gb|ABK88252.1| aryl hydrocarbon receptor, partial [Lagenorhynchus acutus]
Length = 231
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 74/112 (66%), Gaps = 6/112 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 120 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 179
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGM 338
D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SGM
Sbjct: 180 PTGCDAKGRIVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGM 231
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 6 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 54
Query: 596 RQLMW 600
RQL W
Sbjct: 55 RQLHW 59
>gi|118419967|gb|ABK88253.1| aryl hydrocarbon receptor, partial [Globicephala melas]
Length = 231
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 74/112 (66%), Gaps = 6/112 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 120 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 179
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGM 338
D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SGM
Sbjct: 180 PTGCDAKGRIVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGM 231
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 6 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRAEFQ 54
Query: 596 RQLMW 600
RQL W
Sbjct: 55 RQLHW 59
>gi|304561306|gb|ADM43599.1| AHR2 [Trachemys scripta]
Length = 351
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 75/112 (66%), Gaps = 6/112 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ GR+K LHGQ ++ E+ P LALFAI TP P S+LE+ K +F++KHKLD +
Sbjct: 240 LNFHGRLKFLHGQQKRTEDGTLRPPQLALFAIATPLQPLSILELRTKTFIFQTKHKLDFT 299
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGM 338
V+ D RGK++LGY++TEL G GY VH D+ + A H +++KTG SGM
Sbjct: 300 PVACDSRGKVVLGYTETELCMRGSGYQFVHAADMMHCAENHVKIMKTGESGM 351
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPP 606
+SDI++QSV+EL+H++DR Q QL W+ LPP
Sbjct: 152 QSDIIYQSVFELIHTDDRAMFQCQLHWSLNLPP 184
>gi|118419963|gb|ABK88251.1| aryl hydrocarbon receptor, partial [Lagenorhynchus albirostris]
Length = 231
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 74/112 (66%), Gaps = 6/112 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 120 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 179
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGM 338
D +G+++LGY++ EL G GY +H D+ Y A H ++KTG SGM
Sbjct: 180 PTGCDAKGRIVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGM 231
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++H SVYEL+H+EDR E Q
Sbjct: 6 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHHSVYELIHTEDRAEFQ 54
Query: 596 RQLMW 600
RQL W
Sbjct: 55 RQLHW 59
>gi|260784198|ref|XP_002587155.1| hypothetical protein BRAFLDRAFT_235977 [Branchiostoma floridae]
gi|229272294|gb|EEN43166.1| hypothetical protein BRAFLDRAFT_235977 [Branchiostoma floridae]
Length = 221
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 4/99 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSL 288
L I GRIK LHGQN+KLE P LALFAI P PPS++EI K ++F++KH+LD S
Sbjct: 123 LHITGRIKQLHGQNKKLESGERYPQLALFAIACPLQPPSIVEIRTKNMIFRTKHRLDFSP 182
Query: 289 VSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
+S+DQ+GK +LGY++ EL GY VH+ D Y A +H
Sbjct: 183 LSVDQKGKAVLGYTEKELQARSGYQFVHFADTMYCADSH 221
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 15/91 (16%)
Query: 551 CDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAG 610
CD L + + T Q+ G+ +SD++HQ VYEL+H+EDR E +RQL WN E+A
Sbjct: 21 CDGLVFYASHTI-QDYLGFQ---QSDVIHQGVYELIHTEDRAEFRRQLSWNMQPLEETAD 76
Query: 611 -----------ISLQECFLQENSYLLERSFT 630
+ E S +LERSF
Sbjct: 77 PGQVSANNNSVVPYNGVMCPEGSMVLERSFV 107
>gi|339248531|ref|XP_003373253.1| putative aryl hydrocarbon receptor [Trichinella spiralis]
gi|316970695|gb|EFV54586.1| putative aryl hydrocarbon receptor [Trichinella spiralis]
Length = 587
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 17/172 (9%)
Query: 232 RLDIRGRIKILHG-----------QNR---KLEEPPLALFAICTPFGPPSLLEIPHKEVM 277
R D+RG++ L G NR ++EP A C P P+ +++ +
Sbjct: 208 RFDVRGKLVKLEGLLPVPTCQVNSSNRFQPGMQEP-YGFLAACVPVVVPTHVDLGIEGSF 266
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
KSKH L L L S D+ +LG D+ L + Y +H D+A++A AH+++L TG++G
Sbjct: 267 LKSKHSLQLVLCSCDESFMWVLGVKDSSLP-ISFYSFIHEHDIAFIADAHRQVLATGSAG 325
Query: 338 MIAYRFQTNDGGWQ-WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
++ YR ++ + WLQTS RL KN KP+ + THR L E EG LL R
Sbjct: 326 ILVYRVRSKVKNTEYWLQTSCRLSTKNGKPELITCTHRLLTEYEGSMLLDMR 377
>gi|210063637|gb|ACJ06577.1| aryl hydrocarbon receptor [Neovison vison]
Length = 306
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K L P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 197 MNFQGRLKYLHGQNKKGKDGSLLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 256
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGAS 336
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG S
Sbjct: 257 PTACDAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGES 306
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 30/112 (26%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SD++HQSVYEL+H+EDR E Q
Sbjct: 83 NGFVLVV-----TTDALVFYASSTI---QDYLGFQ---QSDVIHQSVYELIHTEDRGEFQ 131
Query: 596 RQLMW-----------------NSFLPPESAGISLQECFLQENSYLLERSFT 630
RQL W N P++ G + ENS +ERSF
Sbjct: 132 RQLHWTLNPSPCTDSGQRIDEANGL--PQTVGCYTPDQLPPENSSFMERSFV 181
>gi|25395324|pir||G87883 protein C41G7.5 [imported] - Caenorhabditis elegans
Length = 650
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 12/165 (7%)
Query: 232 RLDIRGRIKILHG------QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
R+D+RG++ LHG R P L + +CTPF PPS ++ ++++ K+KH+LD
Sbjct: 254 RIDMRGKLMSLHGLPSSYVMGRTASGPVLGMICVCTPFVPPSTSDLASEDMILKTKHQLD 313
Query: 286 LSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQT 345
+LVSMDQ+ +L +T+L M Y+LVH +D +A AH+E +K G+SG++ YR
Sbjct: 314 GALVSMDQKVYEMLEIDETDLP-MPLYNLVHVEDAVCMAEAHKEAIKNGSSGLLVYRL-V 371
Query: 346 NDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEE-EGRDLLGKRT 389
+ Q S L+ K DF++ +H E EG LL KR+
Sbjct: 372 STKTRQIQNFSEHLL---GKIDFIVLSHHLFFSEVEGTMLLEKRS 413
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQEN 621
A +N + Y +SD++HQ VY+L+HSEDR+++++QL N +P SA + F +N
Sbjct: 172 ASENVENYLGFHQSDVLHQPVYDLIHSEDRDDIRQQLDSNFHIPTSSASNQF-DVFAPQN 230
Query: 622 SYLLERS 628
S LER+
Sbjct: 231 SKYLERN 237
>gi|2674113|gb|AAC60336.1| aryl hydrocarbon receptor 2 [Mustelus canis]
Length = 219
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQN+K E+ P LALFA+ TP PPS+LE+ K ++F++KHKLD +
Sbjct: 115 LNFQGRLKFLHGQNKKAEDGTPIPPQLALFAVATPLQPPSILEVRTKMLIFQTKHKLDFT 174
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELL 331
++ D +GK +LGY++TEL G GY +H D+ Y A H +++
Sbjct: 175 PLACDTKGKFVLGYTETELCMRGTGYQFIHAADMMYCADNHVKMI 219
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
+SD+VHQSV+EL+H++DR + QL W L P+S
Sbjct: 25 QSDVVHQSVFELIHTDDRATFRHQLHWA--LNPQSC 58
>gi|6524996|gb|AAF15279.1|AF192501_1 aryl hydrocarbon receptor [Anas platyrhynchos]
Length = 304
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 97/191 (50%), Gaps = 28/191 (14%)
Query: 151 EVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPL----KSLAEMNTIGEN 206
E RQ L W NPS+S + P + N SQ YN D L S E N I
Sbjct: 132 EFQRQ--LHWALNPSQSADSGPSVQGD--NGFSQPATYYNPDQLPPENSSFMERNFICRL 187
Query: 207 KWKESPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICT 261
+ ++ S + + N +GR+K LHGQN+K ++ P LALFA+ T
Sbjct: 188 RC-----LLDNSSGFLAMN---------FQGRLKFLHGQNKKGKDGTTLSPQLALFAVAT 233
Query: 262 PFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDL 320
P PPS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY VH D+
Sbjct: 234 PLQPPSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFVHAADM 293
Query: 321 AYVASAHQELL 331
Y A H ++
Sbjct: 294 LYCAENHVRMM 304
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 28/110 (25%)
Query: 536 NGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQ 595
NGF L + D Y T+ Q+ G+ +SDI+HQSV+EL+H+EDR E Q
Sbjct: 86 NGFVLVV-----TADALVFYVSSTI---QDYLGFQ---QSDIIHQSVFELIHTEDRPEFQ 134
Query: 596 RQLMWNSFLPPESA--GISLQ--ECFLQ------------ENSYLLERSF 629
RQL W + P +SA G S+Q F Q ENS +ER+F
Sbjct: 135 RQLHW-ALNPSQSADSGPSVQGDNGFSQPATYYNPDQLPPENSSFMERNF 183
>gi|2674115|gb|AAC60337.1| aryl hydrocarbon receptor [Leucoraja erinacea]
Length = 216
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L I GR+K LHGQN++ E+ P LALFAI TP P++LEI + +F++KHKLD S
Sbjct: 112 LSIEGRLKYLHGQNKRAEDGSLLPPQLALFAIATPLQVPAILEIRTRSALFQTKHKLDFS 171
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELL 331
V+ D + +++LGYS+ EL G GY +H D+ Y A H L+
Sbjct: 172 PVACDAKARIVLGYSELELCMRGSGYQFIHAHDMVYCADNHVRLM 216
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW 600
++ ++HQ V+EL+H +DR+E QRQL W
Sbjct: 25 QTAVMHQPVFELIHPDDRDEFQRQLHW 51
>gi|358410766|ref|XP_601023.5| PREDICTED: uncharacterized protein LOC522736, partial [Bos taurus]
Length = 847
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 265 PPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYV 323
PP I E + H ++ L + RGK++LGY+D+EL G GY +H D Y
Sbjct: 345 PPDTTPISRAEQ--QDTHYREVRLWRLFCRGKVVLGYTDSELCRQGSGYQFIHVADAMYC 402
Query: 324 ASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRD 383
A H +++TG SG+ +R T GW W+Q+++ LV++ +PD +++ R L + EG D
Sbjct: 403 AENHARMMRTGESGLTVFRLLTKRAGWLWVQSNAHLVFRGGQPDCIVARQRALTDVEGED 462
Query: 384 LLGKRTMDFKVSY 396
L KR + ++
Sbjct: 463 HLRKRALQGPFTF 475
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQE 615
+SDI++QSV+EL+H EDR Q Q +W PP++ IS E
Sbjct: 318 QSDIIYQSVFELIHKEDRATFQSQFLW----PPDTTPISRAE 355
>gi|359062827|ref|XP_002685208.2| PREDICTED: aryl hydrocarbon receptor [Bos taurus]
Length = 693
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 282 HKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIA 340
H ++ L + RGK++LGY+D+EL G GY +H D Y A H +++TG SG+
Sbjct: 206 HYREVRLWRLFCRGKVVLGYTDSELCRQGSGYQFIHVADAMYCAENHARMMRTGESGLTV 265
Query: 341 YRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
+R T GW W+Q+++ LV++ +PD +++ R L + EG D L KR + ++
Sbjct: 266 FRLLTKRAGWLWVQSNAHLVFRGGQPDCIVARQRALTDVEGEDHLRKRALQGPFTF 321
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQE 615
+SDI++QSV+EL+H EDR Q Q +W PP++ IS E
Sbjct: 164 QSDIIYQSVFELIHKEDRATFQSQFLW----PPDTTPISRAE 201
>gi|47221954|emb|CAG08209.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 38/183 (20%)
Query: 233 LDIRGRIKILHGQ-----NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQ N P LALF I P PP +LEI K ++F++KHKLD +
Sbjct: 133 LSFQGRLKYLHGQRALRDNGTCSHPQLALFTIAVPVHPPPILEIRAKMLLFQTKHKLDFT 192
Query: 288 LVSMDQRGK-MLLGYSDTEL---ANMGGYDLVHYDDL------AYVAS------------ 325
+ +D RGK +L+ + D L + + YD L YVAS
Sbjct: 193 PMGIDSRGKAILVLFGDGALYERLRLPVHPRSRYDVLRRQPPPQYVASWRPQLNSPLIHL 252
Query: 326 ----AHQEL-------LKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHR 374
AH L +KTG SGM +R + GW W++ +++L+YK +PDF+ R
Sbjct: 253 WRANAHVSLVCLFPPVIKTGESGMTVFRLLSKSSGWVWVKANAKLIYKGGRPDFINVYQR 312
Query: 375 PLM 377
L+
Sbjct: 313 ALV 315
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 573 FESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQEC----------FLQENS 622
SD+VHQSV+EL+H++DR ++QL + P E+ G Q C ENS
Sbjct: 50 LSSDVVHQSVFELIHTDDRGTFRQQLHFALNPPAENDGEGPQGCGNALTYSPDQLPPENS 109
Query: 623 YLLERSFT 630
LER+F
Sbjct: 110 SFLERNFV 117
>gi|6524994|gb|AAF15278.1|AF192500_1 aryl hydrocarbon receptor [Necturus maculosus]
Length = 303
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++++GR+K LHGQN+K ++ P LALFA+ TP PS+LEI + ++F++KHKLD +
Sbjct: 199 MNVQGRLKFLHGQNQKRKDGSLIPPQLALFALATPLQSPSILEIRTRNIIFRTKHKLDFT 258
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELL 331
+ D +G ++LGY++ EL G GY +H D+ Y A H ++
Sbjct: 259 PIGCDAKGSIVLGYTEAELCVRGTGYQFIHAADMMYCAENHVRMI 303
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 14/71 (19%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW--NSFLPPESAGISLQECFLQ------------ 619
+SD+VHQSVYEL+H+EDR E QRQL W + PP + + F+Q
Sbjct: 113 QSDVVHQSVYELIHAEDRPEFQRQLHWALDPIQPPNAGQKEGNKEFIQPASYYDPDQLPP 172
Query: 620 ENSYLLERSFT 630
ENS +ER+F
Sbjct: 173 ENSSFMERNFI 183
>gi|2921310|gb|AAC35490.1| aryl hydrocarbon receptor 2 [Platichthys flesus]
Length = 212
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 233 LDIRGRIKILHGQ-----NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQ NR P LALF+I P PS++EI K ++F++KH+LD +
Sbjct: 108 LKFQGRLKFLHGQSVVKDNRTCNHPQLALFSIAMPVQSPSIVEIRAKMILFQTKHQLDFT 167
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELL 331
+ +D RGK++LGYS+TEL G GY +H D+ + A H ++
Sbjct: 168 PMGIDSRGKIILGYSETELCMKGSGYQFIHAADMMHCADRHMRMI 212
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Query: 567 KGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPES-AGISLQ----------E 615
K Y +SD+VHQSV++L+H++DR+ ++QL + PP S AG LQ E
Sbjct: 18 KEYLGFHQSDVVHQSVFDLIHTDDRDMFRQQLHFALNPPPISTAGNGLQSSGNTESYSPE 77
Query: 616 CFLQENSYLLERSFT 630
ENS +LERSF
Sbjct: 78 HLPPENSSILERSFV 92
>gi|1065998|dbj|BAA07235.1| Ah-receptor [Homo sapiens]
Length = 106
Score = 94.0 bits (232), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 67/101 (66%), Gaps = 6/101 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +G++K LHGQ +K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 2 MNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 61
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAH 327
+ D +G+++LGY++ EL G GY +H D+ Y A +H
Sbjct: 62 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESH 102
>gi|2674111|gb|AAC60335.1| aryl hydrocarbon receptor 1 [Mustelus canis]
Length = 211
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K L+ QN K ++ P LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 107 MNFQGRLKFLYEQNMKGKDGSCVPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 166
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELL 331
+ D +GK++LGY++ EL G GY +H D+ Y A H ++
Sbjct: 167 PMGCDAKGKIVLGYTEAELCMRGSGYQFIHAADMMYCAENHVRMM 211
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 10/67 (14%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW--NSFLPPESA--GISL------QECFLQENSY 623
+SDI+HQSV+EL+H+EDR E +RQL W N PESA G++L E ENS
Sbjct: 25 QSDIIHQSVFELIHTEDRAEFRRQLHWALNPTSDPESAETGLTLPIAHYSPEQLPPENSP 84
Query: 624 LLERSFT 630
LER+F
Sbjct: 85 FLERNFV 91
>gi|55275967|gb|AAV49749.1| aryl hydrocarbon receptor 1, partial [Xenopus (Silurana)
tropicalis]
Length = 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALF + TP PS+LEI K +F++KHKLD +
Sbjct: 112 MNFQGRLKFLHGQNKKGKDGAIIPPQLALFTLATPLQSPSILEIRTKNFIFRTKHKLDFT 171
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELL 331
+ D +G ++LGY++ EL G GY +H D+ Y A H ++
Sbjct: 172 PIGCDTKGSVVLGYTEAELCVRGTGYQFIHAADMLYCADNHIRMI 216
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 16/72 (22%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLP----------PESAGISLQECFL----- 618
+SD++HQSVYEL+H+EDR E QRQL W +F P P+ S C+
Sbjct: 26 QSDVIHQSVYELIHTEDRVEFQRQLHW-AFDPSHPSNSVQRSPDENEFSAIPCYKPEHLP 84
Query: 619 QENSYLLERSFT 630
ENS +ER+F
Sbjct: 85 PENSSFMERNFV 96
>gi|374638046|gb|AEZ55099.1| ary hydrocarbon receptor, partial [Oryzias melastigma]
Length = 133
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 66/94 (70%), Gaps = 7/94 (7%)
Query: 233 LDIRGRIKILHGQNRKLEE------PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L+I+GR+K LHGQ+R+ + P LALFAI TP PP++LEI K ++F++KHKLDL
Sbjct: 40 LNIQGRLKFLHGQSRQPSDSERGSPPQLALFAIATPLLPPAILEIRTKNMIFRTKHKLDL 99
Query: 287 SLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDD 319
+ ++ D +GK++LGY++ EL G GY +H D
Sbjct: 100 TPMACDAKGKIVLGYTEAELRVRGSGYQFIHAAD 133
>gi|322780870|gb|EFZ10099.1| hypothetical protein SINV_16353 [Solenopsis invicta]
Length = 252
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 109/204 (53%), Gaps = 33/204 (16%)
Query: 42 YRP---YYPEYQPYTVSNGF---SLPTYEVNK--SNDCDKLYCHQTLTADQNSKGY---- 89
YRP YYPEY T NGF SLPTYE ++ S +KLYC Q + + Y
Sbjct: 14 YRPLGSYYPEYHTGTAYNGFIDVSLPTYETHQLASKTEEKLYCQQLGSGESPKYSYVETR 73
Query: 90 ------SSPYITLPLCSDL---PQSHKLPSKSLNSK-SLD----GLSSNDSSPV--PSNH 133
SPY P+ S P + + S+ SL+ +S SSPV +N
Sbjct: 74 HPGSVSGSPYAASPVASVSTMHPATTDMNVVRAGSRHSLEGGASSSNSAGSSPVTGAANG 133
Query: 134 LVTPKVEDIKSESFNYSEVPRQTVLMWGSNPSRSPP---ASPILPNGHINYPSQEIKKYN 190
++TPK+ED+K E ++ +E PRQTVLMWG+ PSR+PP S P H + S
Sbjct: 134 MLTPKIEDVKPEVYS-NEAPRQTVLMWGAPPSRTPPRNNGSYSPPTPHSTHSSTHSTNTT 192
Query: 191 GDPLKSLAEMNTI-GENKWKESPP 213
GDPLKSLAEMN++ G+ KW+++ P
Sbjct: 193 GDPLKSLAEMNSMNGDCKWRQTSP 216
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 32/51 (62%), Gaps = 9/51 (17%)
Query: 516 ENLFHQYRP---YYPEYQPYTVSNGF---SLPTYEVNK--SNDCDKLYCHQ 558
ENLF QYRP YYPEY T NGF SLPTYE ++ S +KLYC Q
Sbjct: 9 ENLF-QYRPLGSYYPEYHTGTAYNGFIDVSLPTYETHQLASKTEEKLYCQQ 58
>gi|405978596|gb|EKC42974.1| Single-minded-like protein 2 [Crassostrea gigas]
Length = 641
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 250 EEPPLALFAICTPFG-PPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+ PP + C PF S L K+ +F SKH +DL++ +D++ ++GYS EL +
Sbjct: 104 QNPPQIMLLFCQPFMLTGSDLTNDVKQNVFWSKHDMDLTIRELDKKAYDIIGYSADELND 163
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDF 368
+ Y VH +DL A+ H+ L+++ + +R +T +G W WL + +++ KNSK
Sbjct: 164 VTLYKYVHPEDLVTFAACHKTLMESTEVQTMYFRIETRNGKWIWLHSRGKVISKNSKKFS 223
Query: 369 VISTHRPLMEEEGRDLLGKRTM--DFKVSYLDAGLNNSYFS 407
++ TH P+ EE+ L + + + + L + N ++S
Sbjct: 224 IVFTHCPVREEDSTFLQQETALRQRYAIGDLQFFIQNGHYS 264
>gi|157132927|ref|XP_001662706.1| circadian locomoter output cycles kaput protein (dclock) (dpas1)
[Aedes aegypti]
gi|108871039|gb|EAT35264.1| AAEL012562-PA [Aedes aegypti]
Length = 900
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H+DDL V S H+ L++ G
Sbjct: 263 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGEGT 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR-----PLMEEEGRDLLGKRTM 390
YRF T W WLQT + Y NSKP+FV+ THR +M++ G+
Sbjct: 323 SCFYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADVMKQMRNQAGGEGKF 382
Query: 391 DFKVSYLDAGLNNSYFSDSDQLTPSHQTLAPSPGSAQS-----------GSSSTTPQRVN 439
+ G+ + Q + S LA SP S++S GS + P R
Sbjct: 383 SEDTDSVSIGVERKF-----QPSSSQSLLATSPWSSKSSRTSRIAPTPGGSPTGAPSRGR 437
Query: 440 RRYKT 444
RY T
Sbjct: 438 HRYNT 442
>gi|38232198|gb|AAR14936.1| CLOCK [Antheraea pernyi]
Length = 611
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D+R ++GY E+ GYD H+DDL V + H+ L++ G
Sbjct: 244 FTSRHSLEWKFLFLDRRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVITCHEALMQKGELT 303
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVS 395
YRF T W WLQT + Y NSKP+F++ THR + + + + +++ +V
Sbjct: 304 SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYTDMEKDMKQESVEGEV- 362
Query: 396 YLDAGLNNSYFSDSDQLTPSHQTLAPSPGSAQSGS 430
DA LN D+ P ++PSP GS
Sbjct: 363 MSDADLNRGTIEDATAENP---VVSPSPPYVSEGS 394
>gi|156397887|ref|XP_001637921.1| predicted protein [Nematostella vectensis]
gi|156225037|gb|EDO45858.1| predicted protein [Nematostella vectensis]
Length = 340
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 244 GQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSD 303
GQ +K+ PL L AI P + E+P F S+H LD+ + D R LLGY+
Sbjct: 208 GQEQKV---PLFLVAIAVPLMFATTFEVPLDRGTFTSRHMLDMKFLQCDDRVSSLLGYTR 264
Query: 304 TELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY-- 361
E+ Y H DL V + H+ LL G S YRF GGW WLQT + +VY
Sbjct: 265 EEMIGKSWYSFHHAADLDNVLNTHKMLLTKGQSVSKYYRFMVRGGGWVWLQTKANVVYDS 324
Query: 362 KNSKPDFVISTHRPL 376
K +P FV + L
Sbjct: 325 KTCQPQFVFCINYVL 339
>gi|196005115|ref|XP_002112424.1| hypothetical protein TRIADDRAFT_56431 [Trichoplax adhaerens]
gi|190584465|gb|EDV24534.1| hypothetical protein TRIADDRAFT_56431 [Trichoplax adhaerens]
Length = 378
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 242 LHGQNRKL-EEPPLALFAICTPFGPPSL-LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLL 299
+HG+ +KL E LFA CT P SL + + K V+F+SKH +D + + +D +L
Sbjct: 179 IHGKIKKLYTENKWTLFATCTAIMPDSLSIGLYPKNVIFQSKHTIDFTFLEVDDMLMKVL 238
Query: 300 GYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRL 359
G++ EL Y L+H D+ Y+A H G + +R T W W+ ++R
Sbjct: 239 GFTRKELIGTSAYKLIHQGDVNYIAQKHV----NGEARSGTFRLLTKSQHWIWVHGTARC 294
Query: 360 VYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
V+K S D ++ T+R + + EG + L KR
Sbjct: 295 VFKKSTLDSLMVTYRVVSDLEGEESLKKR 323
>gi|262357098|gb|ACY56482.1| aryl hydrocarbon receptor 2, partial [Sebastiscus marmoratus]
Length = 186
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 10/99 (10%)
Query: 233 LDIRGRIKILHGQ------NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L +GR+K LHGQ N KL+ LALF I P PP+++EI K ++F++KHKLD
Sbjct: 89 LKFQGRLKYLHGQRVLNGNNNKLQ---LALFTIAMPVQPPTIVEIRAKMLLFQTKHKLDF 145
Query: 287 SLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
+ + +D RGK++LGYS+TEL G GY +H D+ Y A
Sbjct: 146 TPLGVDSRGKIILGYSETELCMKGSGYQFIHAADMMYCA 184
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 15/70 (21%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS---LQECF--LQ--------E 620
+SD+VHQSV+EL+H++DRE ++QL + L P SAG LQ C L E
Sbjct: 6 QSDVVHQSVFELIHTDDRELFRQQLHFA--LNPSSAGADEDILQSCVDPLMYNPDQLPPE 63
Query: 621 NSYLLERSFT 630
NS +ERSF
Sbjct: 64 NSSFMERSFV 73
>gi|260833470|ref|XP_002611680.1| hypothetical protein BRAFLDRAFT_63636 [Branchiostoma floridae]
gi|229297051|gb|EEN67690.1| hypothetical protein BRAFLDRAFT_63636 [Branchiostoma floridae]
Length = 1410
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 113/243 (46%), Gaps = 36/243 (14%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL ++ H++L++ G
Sbjct: 830 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDRISICHEQLMQCGEGT 889
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH---------RPLMEEEGRDLLG 386
YRF T W WLQT + Y NSKP+F++ TH L +E G G
Sbjct: 890 SCCYRFLTKGQQWIWLQTRYYITYNQWNSKPEFIVCTHTVVSYSEVCNKLRQELGLSDSG 949
Query: 387 KRTMDFKVSY--LDAGLNNSYFSDSDQLTPSHQTLAP--SP-GSAQSGS---SSTTPQRV 438
+D VS+ L L+NS + S++ S ++ AP SP GSA+ S TTP V
Sbjct: 950 D-NVDMSVSFGTLKRSLSNSSLAVSEKSRKSQRSSAPDRSPHGSAEMHSVQVGETTPGSV 1008
Query: 439 N--------RRYKTQLRDFLSTCRTK------RKMSAQHAAPPPPTPAPPIEYLTPPDAV 484
++YKT L D L+T +T+ S Q + P P P + + P V
Sbjct: 1009 QGEDFPDITKQYKT-LNDLLTT-KTRPVSSHSSSTSVQQPSNPSQRPQPSSSHHSAPQTV 1066
Query: 485 AAA 487
+A
Sbjct: 1067 PSA 1069
>gi|60280516|gb|AAX18240.1| aryl hydrocarbon receptor [Acipenser transmontanus]
Length = 203
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Query: 233 LDIRGRIKILHGQNRKLEEPPL-----ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQN+ E+ L ALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 116 LNFQGRLKFLHGQNKLSEDGTLVPSQLALFAIGTPLQPPSILEIRTKTLIFQTKHKLDFT 175
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDL 314
+ D RGK++LGY++TEL G GY
Sbjct: 176 PMGCDTRGKVVLGYTETELCMRGTGYQF 203
>gi|407316774|gb|AFU07569.1| hypoxia-inducible factor 2 alpha subunit [Schizothorax prenanti]
Length = 833
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPLALFAI-CTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +K+ +G ++ +EPPLA + C P PS ++ P F S+H +D+
Sbjct: 191 LHCTGHLKVYNGCPARVLCGFKEPPLACVVLWCEPIAHPSNIDTPLDSKTFLSRHSMDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D R L+GYS +L Y+ H D V +HQ L G + YR +
Sbjct: 251 FTYCDDRVTELMGYSPEDLLGRSAYEFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKN 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSY 405
GG+ W++T ++Y +NS+P ++ + L + E + ++ +MD S A N +
Sbjct: 311 GGYVWVETQGTVIYNSRNSQPQCIVCVNYVLSDVEEKSMI--FSMDQTESLFKAQHLNRF 368
Query: 406 FSDSDQLTPSHQTLAPSPG 424
FS PS L PG
Sbjct: 369 FS------PSKGGLGSEPG 381
>gi|449670512|ref|XP_002167197.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Hydra
magnipapillata]
Length = 518
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L AI P + +E P F SKH LD+ + MD +LGYSD E+ Y
Sbjct: 227 CLLAIGNPLLTSTSVEFPIDRKTFISKHSLDMKIFEMDNITSSILGYSDKEMLGYSWYIY 286
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIST 372
+H D V + H+ LLK G S YR +GGW WLQT +VY N +P ++
Sbjct: 287 IHLCDTDVVKACHETLLKKGQSVSAYYRVLHLNGGWLWLQTIGNVVYLESNGQPQYIFCM 346
Query: 373 HRPL--MEEEGRDLLGKRTMDFKV 394
H + +E EG +L + +D V
Sbjct: 347 HTVVSGLEAEGT-VLSTKQLDVSV 369
>gi|1582581|prf||2119167A Ah receptor
Length = 212
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 233 LDIRGRIKILHGQN-----RKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L GR+K L GQN ++ LALFAI P PPS++EI K ++F+++HKLD +
Sbjct: 108 LKFHGRLKYLQGQNLCKDIETCKKVQLALFAIAMPVQPPSIVEIRAKMLLFQTRHKLDFT 167
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELL 331
+D RGK +LGY++ EL G GY +H D+ Y A H ++
Sbjct: 168 PTGVDTRGKAILGYTEIELCMKGSGYQFIHAADMMYCADNHIRMI 212
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 567 KGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISL-QECFLQ------ 619
K Y +SD+VHQSV+EL+H++DR + QL + PP ++ Q C
Sbjct: 18 KDYLGFHQSDVVHQSVFELIHTDDRAMFREQLHFALNPPPVASDAEFSQGCAKAVMYNPE 77
Query: 620 ----ENSYLLERSFT 630
++S LERSF
Sbjct: 78 QLPPDSSSFLERSFV 92
>gi|300791269|gb|ADK34051.1| aryl hydrocarbon receptor 1 [Charadrius melodus]
Length = 106
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+LEI K +F++KHKLD +
Sbjct: 26 MNFQGRLKFLHGQNKKGKDGATLSPQLALFAVATPLQPPSILEIRTKNFIFRTKHKLDFT 85
Query: 288 LVSMDQRGKMLLGYSDTEL 306
D +GK++LGY++ EL
Sbjct: 86 PTGCDAKGKIVLGYTEAEL 104
>gi|50403829|gb|AAT76668.1| hypoxia-inducible factor 2 alpha [Ctenopharyngodon idella]
Length = 835
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +K+ +G ++ +EPPL + +C P PS ++ P F S+H +D+
Sbjct: 191 LHCTGHLKVCNGCPARVLCGFKEPPLTCVVMMCEPIPHPSNIDTPLDSKAFLSRHSMDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D R L+GYS +L YD H D V +HQ L G + YR +
Sbjct: 251 FTYCDDRVTELMGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKN 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSY 405
GG+ W++T ++Y +NS+P ++ + L + E + ++ +MD S NS+
Sbjct: 311 GGYVWVETQGTVIYNSRNSQPQCIVCVNYVLSDVEEKSMI--FSMDQTESLFKPHNLNSF 368
Query: 406 FSDSDQLTPSHQT----------------LAPSPG 424
FS S + S Q+ LAP+PG
Sbjct: 369 FSPSKRSLGSDQSEALFTKLKEEPEDLTQLAPTPG 403
>gi|407316762|gb|AFU07563.1| hypoxia-inducible factor 2 alpha subunit [Hypophthalmichthys
nobilis]
Length = 832
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 240 KILHGQNRKLEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKML 298
++L G +EPPL + +C P PS ++ P F S+H +D+ D R L
Sbjct: 206 RVLCG----FKEPPLTCVVMMCEPIPHPSNIDTPLDSKAFLSRHSMDMKFTYCDDRVTEL 261
Query: 299 LGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSR 358
+GYS +L YD H D V +HQ L G + YR +GG+ W++T
Sbjct: 262 MGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETQGT 321
Query: 359 LVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSH 416
++Y +NS+P ++ + L + E + ++ +MD S S+FS PS
Sbjct: 322 VIYNSRNSQPQCIVCVNYVLSDVEEKSMIC--SMDQTESLFKPHNLKSFFS------PSK 373
Query: 417 QTLAPSPGSA 426
++L PG A
Sbjct: 374 RSLGSDPGEA 383
>gi|242017615|ref|XP_002429283.1| Circadian locomoter output cycles protein kaput, putative
[Pediculus humanus corporis]
gi|212514179|gb|EEB16545.1| Circadian locomoter output cycles protein kaput, putative
[Pediculus humanus corporis]
Length = 660
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H LD +++D R ++GY E+ GYD H DDL + H+ L++ G
Sbjct: 248 FTSRHNLDWKFLALDSRATPIIGYVQLEVVGTSGYDYYHIDDLDKIVVCHETLMEKGEGT 307
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPL 376
YRF T W WLQT + Y NSKP+F++ THR +
Sbjct: 308 SCYYRFLTKGQQWIWLQTRFYISYHQWNSKPEFIVCTHRVV 348
>gi|407316772|gb|AFU07568.1| hypoxia-inducible factor 2 alpha subunit [Hypophthalmichthys
molitrix]
Length = 832
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 240 KILHGQNRKLEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKML 298
++L G +EPPL + +C P PS ++ P F S+H +D+ D R L
Sbjct: 206 RVLCG----FKEPPLTCVVMMCEPIPHPSNIDTPLDSKAFLSRHSMDMKFTYCDDRVTEL 261
Query: 299 LGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSR 358
+GYS +L YD H D V +HQ L G + YR +GG+ W++T
Sbjct: 262 MGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETQGT 321
Query: 359 LVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSH 416
++Y +NS+P ++ + L + E + ++ +MD S S+FS PS
Sbjct: 322 VIYNSRNSQPQCIVCVNYVLSDVEEKSMIC--SMDQTESLFKPHNLKSFFS------PSK 373
Query: 417 QTLAPSPGSA 426
++L PG A
Sbjct: 374 RSLGSDPGEA 383
>gi|195017046|ref|XP_001984526.1| GH16514 [Drosophila grimshawi]
gi|193898008|gb|EDV96874.1| GH16514 [Drosophila grimshawi]
Length = 1034
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 260 FISKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 319
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
+ YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 320 LCFYRFLTKGQQWIWLQTDYYVNYHQCNSKPDYVVCTHK 358
>gi|61353791|gb|AAX44045.1| clock [Macrobrachium rosenbergii]
Length = 704
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 250 EEPPLALFAICTPFGPPSLLE----IPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+EP +F P L+ I + F S+H L+ + +D R ++GY E
Sbjct: 258 QEPTKLVFVAIGRLERPQLVREMMIIEPSKTEFTSRHSLEWKFLFLDHRAPTIIGYLPFE 317
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--N 363
+ GYD H +DL VAS H++L+KTG YRF T W WLQT + Y N
Sbjct: 318 VLGTSGYDYYHVEDLDKVASCHEQLMKTGKGTSCYYRFLTKGQQWIWLQTQYYITYHQWN 377
Query: 364 SKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLD 398
SKP+F++ T+ + + + L K M +S L+
Sbjct: 378 SKPEFIVCTNTVVSYSDVKAELVKEQMPNGLSELE 412
>gi|195126649|ref|XP_002007783.1| GI12195 [Drosophila mojavensis]
gi|193919392|gb|EDW18259.1| GI12195 [Drosophila mojavensis]
Length = 1039
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 257 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 316
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEE 380
YRF T W WLQT + Y NSKPD+V+ TH+ + E
Sbjct: 317 SCYYRFLTKGQQWIWLQTDYYVSYHQYNSKPDYVVCTHKVVSHAE 361
>gi|195436110|ref|XP_002066021.1| GK10694 [Drosophila willistoni]
gi|194162106|gb|EDW77007.1| GK10694 [Drosophila willistoni]
Length = 1132
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 264 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 323
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 324 SCYYRFLTKGQQWIWLQTDYYVSYHQYNSKPDYVVCTHK 362
>gi|195325819|ref|XP_002029628.1| GM24988 [Drosophila sechellia]
gi|194118571|gb|EDW40614.1| GM24988 [Drosophila sechellia]
Length = 933
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 173 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 232
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 233 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 271
>gi|345321809|ref|XP_001507683.2| PREDICTED: neuronal PAS domain-containing protein 2-like, partial
[Ornithorhynchus anatinus]
Length = 703
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
L+E P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 123 LVEEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 180
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
+ L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 181 EHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 228
>gi|38176144|gb|AAR13011.1| clock [Danaus plexippus]
Length = 602
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H+DDL V S H+ L++ G
Sbjct: 242 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELT 301
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKP+FV+ THR
Sbjct: 302 SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHR 340
>gi|357614851|gb|EHJ69324.1| clock [Danaus plexippus]
Length = 602
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H+DDL V S H+ L++ G
Sbjct: 242 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELT 301
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKP+FV+ THR
Sbjct: 302 SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHR 340
>gi|291228817|ref|XP_002734373.1| PREDICTED: spineless-like [Saccoglossus kowalevskii]
Length = 798
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 255 ALFAICTPF-GPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
LFA C PF S I K +F SKH++DL ++D R + GY ++ Y+
Sbjct: 281 VLFAACQPFISLASDANIDVKNNVFGSKHEMDLKFKNVDDRVFDVAGYQPSQFEGKSFYE 340
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTH 373
++H D+ V + H+ L+ T + +R +DG W WL T ++VYKNS+ ++ TH
Sbjct: 341 IIHLHDITAVFAWHKLLIDTSEINTMYFRMMKSDGSWVWLHTRGKVVYKNSRKFSIMMTH 400
Query: 374 RP 375
P
Sbjct: 401 CP 402
>gi|442630861|ref|NP_729294.2| clock, isoform G [Drosophila melanogaster]
gi|442630863|ref|NP_996021.2| clock, isoform H [Drosophila melanogaster]
gi|440215449|gb|AAN12019.2| clock, isoform G [Drosophila melanogaster]
gi|440215450|gb|AAS65057.2| clock, isoform H [Drosophila melanogaster]
Length = 895
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 135 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 194
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 195 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 233
>gi|195492665|ref|XP_002094089.1| GE20389 [Drosophila yakuba]
gi|194180190|gb|EDW93801.1| GE20389 [Drosophila yakuba]
Length = 525
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 173 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 232
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 233 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 271
>gi|345306659|ref|XP_001512993.2| PREDICTED: neuronal PAS domain-containing protein 2-like
[Ornithorhynchus anatinus]
Length = 1369
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 26/264 (9%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEV---MFKSKHKLDLSLVSMDQRGKMLLGYSD 303
R E + L A P L E+ + E F S+H L+ + +D R ++GY
Sbjct: 770 RSATEEQICLVATVRLVTPQFLKELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLP 829
Query: 304 TELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK- 362
E+ GYD H DDL +A H+ L++ G YRF T W WLQT + Y
Sbjct: 830 FEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQ 889
Query: 363 -NSKPDFVISTHR-----PLMEEEGRDL-LGKRTMDFKVSYLDAGLNNSYFSDSDQLTPS 415
NSKP+F++ TH + E+ RDL L + +++ S L + +S + D+ Q +
Sbjct: 890 WNSKPEFIVCTHTVVSYGEVRAEKRRDLGLEESSVELAASSLKS---HSSYIDNRQCESN 946
Query: 416 HQT-----------LAPSPGSAQSGSSSTTPQR-VNRRYKTQLRDFLSTCRTKRKMSAQH 463
T S +A S S+ST+ R T+ L +T R++S
Sbjct: 947 QDTSRERVSVSSHSSRRSSHTAMSDSASTSSMRPTEASTPTRPLVCLGQDKTPRRLSTSS 1006
Query: 464 AAPPPPTPAPPIEYLTPPDAVAAA 487
++ P P E+LT AA
Sbjct: 1007 SSQAIVPPQAPAEHLTQHHLAQAA 1030
>gi|62472069|ref|NP_001014574.1| clock, isoform F [Drosophila melanogaster]
gi|61678475|gb|AAX52754.1| clock, isoform F [Drosophila melanogaster]
Length = 961
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 201 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 260
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 261 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 299
>gi|294961106|gb|ADF50044.1| hypoxia-inducible factor 2 alpha [Megalobrama amblycephala]
Length = 835
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +K+ +G ++ +EPPL + +C P PS ++ P F S+H +D+
Sbjct: 191 LHCTGHLKVCNGCPARVLCGYKEPPLTCVVMMCEPIPHPSNIDTPLDSKAFLSRHSMDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D R L+GYS +L YD H D V +HQ L G + YR +
Sbjct: 251 STYCDDRVTELMGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKN 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSY 405
GG+ W++T ++Y +NS+P ++ + L + E R ++ +MD S S+
Sbjct: 311 GGYVWVETQGTVIYNSRNSQPQCIVCVNYVLSDVEERSMI--FSMDQTESLFKPHNLKSF 368
Query: 406 FSDSDQLTPSHQTLAPSPG 424
FS PS +L PG
Sbjct: 369 FS------PSKISLGSDPG 381
>gi|158294626|ref|XP_315720.4| AGAP005711-PA [Anopheles gambiae str. PEST]
gi|157015652|gb|EAA11642.4| AGAP005711-PA [Anopheles gambiae str. PEST]
Length = 1030
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H+DDL V + H+ L++ G
Sbjct: 248 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVACHEALMQKGEGT 307
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPL-MEEEGRDLLGKRTMDFKV 394
YRF T W WLQT + Y NSKP+FV+ THR + + + + + D K
Sbjct: 308 SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADVMKQMRNQTAGDSKF 367
Query: 395 SYLDAGLNNSYFSDSDQLTPSHQTLAPSPGSAQSGSSS 432
S ++ Q + S LA SP S++S +S
Sbjct: 368 SEDADSISVHGVERKFQQSSSQSLLATSPWSSKSSRTS 405
>gi|348571967|ref|XP_003471766.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Cavia
porcellus]
Length = 832
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 258 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLAKCHQHLMQFGKGK 317
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKV 394
YRF T W WLQT + Y NSKP+F++ TH + D+L +R D +
Sbjct: 318 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV---SYADVLLERRQDLAL 373
>gi|197246467|gb|AAI68989.1| Npas2 protein [Rattus norvegicus]
Length = 599
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 34 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 93
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 94 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 131
>gi|195588559|ref|XP_002084025.1| GD13034 [Drosophila simulans]
gi|194196034|gb|EDX09610.1| GD13034 [Drosophila simulans]
Length = 1005
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 258 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 317
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 318 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 356
>gi|355707723|gb|AES03043.1| neuronal PAS domain protein 2 [Mustela putorius furo]
Length = 220
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 103 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 162
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 163 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 200
>gi|62472090|ref|NP_001014576.1| clock, isoform D [Drosophila melanogaster]
gi|47117813|sp|O61735.3|CLOCK_DROME RecName: Full=Circadian locomoter output cycles protein kaput;
AltName: Full=dCLOCK; AltName: Full=dPAS1
gi|61678474|gb|AAX52753.1| clock, isoform D [Drosophila melanogaster]
Length = 1027
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 267 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 326
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 327 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 365
>gi|3219726|gb|AAC62234.1| CLOCK [Drosophila melanogaster]
Length = 1027
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 267 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 326
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 327 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 365
>gi|194865385|ref|XP_001971403.1| GG14938 [Drosophila erecta]
gi|190653186|gb|EDV50429.1| GG14938 [Drosophila erecta]
Length = 1082
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 267 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDNIVACHEELRQTGEGK 326
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 327 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 365
>gi|149046310|gb|EDL99203.1| neuronal PAS domain protein 2 (predicted) [Rattus norvegicus]
Length = 388
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 11 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 70
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 71 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 108
>gi|3192867|gb|AAD10630.1| CLOCK [Drosophila melanogaster]
Length = 1023
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 263 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 323 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 361
>gi|24660399|ref|NP_523964.2| clock, isoform A [Drosophila melanogaster]
gi|7295192|gb|AAF50516.1| clock, isoform A [Drosophila melanogaster]
Length = 1023
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 263 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 323 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 361
>gi|3213258|gb|AAC39101.1| CLOCK [Drosophila melanogaster]
Length = 1015
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 263 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 323 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 361
>gi|344284017|ref|XP_003413767.1| PREDICTED: neuronal PAS domain-containing protein 2 [Loxodonta
africana]
Length = 744
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 234 IVEEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 291
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
Q L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 292 QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 339
>gi|338713871|ref|XP_001915018.2| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 2-like [Equus caballus]
Length = 875
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 308 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 367
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 368 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 405
>gi|210032658|ref|NP_001101684.2| neuronal PAS domain protein 2 [Rattus norvegicus]
Length = 816
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|296223084|ref|XP_002757476.1| PREDICTED: neuronal PAS domain-containing protein 2 [Callithrix
jacchus]
Length = 824
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|1840060|gb|AAB47250.1| neuronal PAS2 [Homo sapiens]
Length = 824
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGTGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|62822273|gb|AAY14822.1| unknown [Homo sapiens]
Length = 813
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 240 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 299
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 300 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 337
>gi|332251540|ref|XP_003274903.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 824
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|119622236|gb|EAX01831.1| neuronal PAS domain protein 2, isoform CRA_b [Homo sapiens]
gi|119622238|gb|EAX01833.1| neuronal PAS domain protein 2, isoform CRA_b [Homo sapiens]
Length = 584
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 11 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 70
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 71 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 108
>gi|37589098|gb|AAH51351.2| Neuronal PAS domain protein 2 [Homo sapiens]
gi|47940153|gb|AAH72383.1| Neuronal PAS domain protein 2 [Homo sapiens]
gi|119622240|gb|EAX01835.1| neuronal PAS domain protein 2, isoform CRA_e [Homo sapiens]
Length = 824
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|354482390|ref|XP_003503381.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Cricetulus griseus]
Length = 849
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 281 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 340
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 341 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 378
>gi|332813975|ref|XP_003309213.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1 [Pan
troglodytes]
gi|410212986|gb|JAA03712.1| neuronal PAS domain protein 2 [Pan troglodytes]
gi|410264234|gb|JAA20083.1| neuronal PAS domain protein 2 [Pan troglodytes]
gi|410306334|gb|JAA31767.1| neuronal PAS domain protein 2 [Pan troglodytes]
gi|410339809|gb|JAA38851.1| neuronal PAS domain protein 2 [Pan troglodytes]
Length = 824
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|22027471|ref|NP_002509.2| neuronal PAS domain-containing protein 2 [Homo sapiens]
gi|311033423|sp|Q99743.3|NPAS2_HUMAN RecName: Full=Neuronal PAS domain-containing protein 2;
Short=Neuronal PAS2; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP4; AltName:
Full=Class E basic helix-loop-helix protein 9;
Short=bHLHe9; AltName: Full=Member of PAS protein 4;
AltName: Full=PAS domain-containing protein 4
gi|121647028|gb|ABM64214.1| neuronal PAS domain protein 2 [Homo sapiens]
Length = 824
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|403294223|ref|XP_003938098.1| PREDICTED: neuronal PAS domain-containing protein 2 [Saimiri
boliviensis boliviensis]
Length = 824
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|297266633|ref|XP_001105763.2| PREDICTED: neuronal PAS domain-containing protein 2-like isoform 2
[Macaca mulatta]
Length = 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 316 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 375
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 376 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 413
>gi|402891716|ref|XP_003909088.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2
[Papio anubis]
Length = 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 316 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 375
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 376 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 413
>gi|351702236|gb|EHB05155.1| Neuronal PAS domain-containing protein 2 [Heterocephalus glaber]
Length = 783
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 213 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 272
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 273 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 310
>gi|380813132|gb|AFE78440.1| neuronal PAS domain-containing protein 2 [Macaca mulatta]
Length = 824
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|355565941|gb|EHH22370.1| hypothetical protein EGK_05616 [Macaca mulatta]
Length = 826
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 253 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 312
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 313 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 350
>gi|426336611|ref|XP_004031561.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 316 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 375
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 376 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 413
>gi|426224037|ref|XP_004006180.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1 [Ovis
aries]
gi|426224039|ref|XP_004006181.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2 [Ovis
aries]
Length = 804
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|139949047|ref|NP_001077232.1| neuronal PAS domain-containing protein 2 [Bos taurus]
gi|134024683|gb|AAI34581.1| NPAS2 protein [Bos taurus]
gi|296482813|tpg|DAA24928.1| TPA: neuronal PAS domain protein 2 [Bos taurus]
Length = 804
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|80479005|gb|AAI09167.1| Neuronal PAS domain protein 2 [Mus musculus]
Length = 816
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|402891714|ref|XP_003909087.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1
[Papio anubis]
Length = 824
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|332251538|ref|XP_003274902.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1
[Nomascus leucogenys]
Length = 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 316 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 375
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 376 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 413
>gi|281337616|gb|EFB13200.1| hypothetical protein PANDA_007843 [Ailuropoda melanoleuca]
Length = 821
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 254 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 313
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 314 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 351
>gi|355751529|gb|EHH55784.1| hypothetical protein EGM_05054 [Macaca fascicularis]
Length = 826
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 253 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 312
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 313 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 350
>gi|332813979|ref|XP_003309214.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2 [Pan
troglodytes]
gi|397489614|ref|XP_003815819.1| PREDICTED: neuronal PAS domain-containing protein 2 [Pan paniscus]
Length = 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 316 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 375
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 376 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 413
>gi|426336609|ref|XP_004031560.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1
[Gorilla gorilla gorilla]
Length = 824
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|221040198|dbj|BAH11862.1| unnamed protein product [Homo sapiens]
Length = 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 316 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 375
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 376 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 413
>gi|161621277|ref|NP_032745.2| neuronal PAS domain-containing protein 2 [Mus musculus]
gi|148682608|gb|EDL14555.1| neuronal PAS domain protein 2 [Mus musculus]
Length = 816
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|259013382|ref|NP_001158398.1| single-minded homolog 1 [Saccoglossus kowalevskii]
gi|90659999|gb|ABD97275.1| single-minded [Saccoglossus kowalevskii]
Length = 783
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L AI P S+ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 209 IGLVAIGHSLPPNSITEIKMHSNMFMFRASLDLKLIFLDARVAALTGYEPQDLIEKTLYH 268
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G +RF T GGW W+Q+S+ +V+ ++S+P ++S
Sbjct: 269 FVHGMDILHIRYAHHTLLLKGQVTTKYFRFLTKQGGWVWMQSSATIVHNSRSSRPHCIVS 328
Query: 372 THRPLMEEEGRDL 384
+ L E ++L
Sbjct: 329 VNTVLTNSEDKEL 341
>gi|291386198|ref|XP_002710059.1| PREDICTED: clock-like [Oryctolagus cuniculus]
Length = 848
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 337 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 396
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 397 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 434
>gi|350582068|ref|XP_003124946.3| PREDICTED: neuronal PAS domain-containing protein 2 [Sus scrofa]
Length = 812
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 267 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLELLARCHQHLMQFGKGK 326
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 327 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 364
>gi|297666909|ref|XP_002811744.1| PREDICTED: neuronal PAS domain-containing protein 2 [Pongo abelii]
Length = 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 316 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 375
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 376 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 413
>gi|410954574|ref|XP_003983939.1| PREDICTED: neuronal PAS domain-containing protein 2 [Felis catus]
Length = 820
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|301767624|ref|XP_002919235.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 818
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|290760624|gb|ADD59897.1| hypoxia-inducible factor 2 alpha [Hemiscyllium ocellatum]
Length = 709
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 233 LDIRGRIKILHG-QNRKL---EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G IKI + Q L +EPPL L +C P PS ++IP F S+H +D+
Sbjct: 145 LHCTGHIKIYNACQAHTLCGYKEPPLTCLIMMCEPIQHPSNIDIPLDSKTFLSRHSMDMK 204
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY EL Y+ H D ++ +HQ L G S YR
Sbjct: 205 FTYCDERIAALMGYCPEELLGRSVYEFYHALDSDHMIKSHQNLCTKGQSVTGQYRMLAKH 264
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ W++T ++Y +NS+P ++ + L E E ++++
Sbjct: 265 GGYVWVETQGTVIYNSRNSQPQCIVCVNYVLSEIEEKNVV 304
>gi|431902452|gb|ELK08951.1| Neuronal PAS domain-containing protein 2 [Pteropus alecto]
Length = 838
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 273 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 332
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 333 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 370
>gi|119622239|gb|EAX01834.1| neuronal PAS domain protein 2, isoform CRA_d [Homo sapiens]
Length = 921
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 348 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 407
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 408 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 445
>gi|407316768|gb|AFU07566.1| hypoxia-inducible factor 2 alpha subunit [Gymnocypris namensis]
Length = 830
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 15/215 (6%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPLALFAI-CTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +K+ G ++ +EPPL + C P PS ++ P F S+H +D+
Sbjct: 191 LHCTGHLKVYDGCPARVLCGFKEPPLTCVVMWCEPIAHPSNIDTPLDSKTFLSRHSMDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D R L+GYS +L YD H D V +HQ L G + YR +
Sbjct: 251 FTYCDDRVTELMGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKN 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSY 405
GG+ W++T ++Y +NS+P ++ + L + E + ++ +MD S N +
Sbjct: 311 GGYVWVETQGTVIYNSRNSQPQCIVCVNYVLSDVEEKSMI--FSMDQTESLFKPQHLNRF 368
Query: 406 FSDSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNR 440
FS P L PG + P+ +N+
Sbjct: 369 FS------PCKGGLGREPGEVLFTNLKDEPEDLNQ 397
>gi|73970055|ref|XP_531781.2| PREDICTED: neuronal PAS domain-containing protein 2 [Canis lupus
familiaris]
Length = 878
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 311 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 370
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 371 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 408
>gi|339649210|gb|AEJ87226.1| clock [Platynereis dumerilii]
Length = 325
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 208 WKESPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLE---EPPLALFAICTP-- 262
W+ ++ Y+ G +LD G I + N + + P F CT
Sbjct: 151 WRCGTVCLTESPVYELVEIQGTFRKLDTDGCILMSKDDNLQSDAGSSAPEVCFC-CTVRL 209
Query: 263 -----FGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHY 317
S ++ KE F S+H ++ + +D RG ++GY E+ GYD H
Sbjct: 210 KCSQVIRELSFVDDSKKE--FTSRHSMEWKFLFLDHRGPTIVGYLPFEVLGTSGYDYYHP 267
Query: 318 DDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
+DL VA H++L++TG YRF T W WLQT+ + Y NSKP+F++ TH
Sbjct: 268 NDLHKVAKGHEQLMQTGKGTSCYYRFLTKGQQWIWLQTTYYITYHQWNSKPEFIVCTH 325
>gi|30231248|ref|NP_840084.1| neuronal PAS domain protein 2 [Danio rerio]
gi|21685550|dbj|BAC02686.1| bHLH-PAS transcription factor [Danio rerio]
gi|190338711|gb|AAI63256.1| Neuronal PAS domain protein 2 [Danio rerio]
Length = 845
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H++L++ G
Sbjct: 287 FTSRHSLEWKFLFLDHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQCGKGK 346
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
YRF T W WLQT + Y NSKP+F++ TH + E R
Sbjct: 347 SCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVR 393
>gi|118600436|gb|AAH28107.1| NPAS2 protein [Homo sapiens]
Length = 622
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|90074851|dbj|BAE87099.1| Single minded [Achaearanea tepidariorum]
Length = 755
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 237 GRIKILHG------QNRKLEEPP-------LALFAICTPFGPPSLLEIPHKEVMFKSKHK 283
G K++H Q +E PP L L A+ P ++ EI MF +
Sbjct: 183 GGYKVIHCSGYLKVQRYNVEAPPYDSCYQNLGLVAVGHSLPPSAITEIKMYSNMFMFRAN 242
Query: 284 LDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRF 343
+DL L+ +D R L GY +L Y +H D + +H+ LL G YRF
Sbjct: 243 MDLRLIFLDARVTNLTGYQPQDLIEKTLYHYIHASDCVQMRYSHETLLHKGQVTTKYYRF 302
Query: 344 QTNDGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDL 384
T DGGW W+Q+ + +V+ ++S+P ++S + L ++EG L
Sbjct: 303 LTKDGGWIWMQSYATVVHNTRSSRPHCIVSVNYVLGKQEGESL 345
>gi|1695799|gb|AAC51211.1| MOP4 [Homo sapiens]
Length = 626
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|2764988|emb|CAA69705.1| Ah receptor, PAS domain [Danio rerio]
Length = 184
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K L+GQN + P LALFA+ P PPS+LEI K +MFK+K+KLD +
Sbjct: 94 VNFQGRLKFLYGQNESTADGKRIPPQLALFALACPLQPPSILEIRTKNLMFKTKYKLDFT 153
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVH 316
++ D +LGY++ EL N G GY +H
Sbjct: 154 PIACDTNWNFVLGYTEAELCNSGSGYQFIH 183
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 13/69 (18%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSF--LPPESAGI------SLQECF-----LQE 620
+SD++HQSVYEL+H+EDR E QRQL W + P+S + + + C+ E
Sbjct: 9 QSDVIHQSVYELIHTEDRHEFQRQLRWALYPGFTPDSRQLVQASPDASRTCYSPEQLSLE 68
Query: 621 NSYLLERSF 629
NS LER+F
Sbjct: 69 NSTFLERNF 77
>gi|443709470|gb|ELU04142.1| hypothetical protein CAPTEDRAFT_187600 [Capitella teleta]
Length = 570
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 255 ALFAICTPF--GPPSLLEIPHKEVMFKS--------KHKLDLSLVSMDQRGKMLLGYSDT 304
LFA C PF P LL P KS KH+LDL MD + + LGY+
Sbjct: 233 VLFAFCRPFLSHSPELLASPSILTEGKSSSVSGLWTKHELDLQFKQMDPKVEETLGYTTD 292
Query: 305 ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNS 364
L Y ++H +DL V S H+ L+ T + +R Q + G W WL T ++ +KNS
Sbjct: 293 SLEGTSFYKIIHPEDLFVVQSCHRALIFTEEIQTMYFRVQHSKGLWVWLHTRGKVAFKNS 352
Query: 365 KPDFVISTHRPLMEEE 380
K ++ TH P+ EE+
Sbjct: 353 KKYSIVFTHCPVREED 368
>gi|189031508|gb|ACD74897.1| aryl hydrocarbon receptor 2 [Boreogadus saida]
Length = 193
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 233 LDIRGRIKILHGQNRKLE-----EPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L +GR+K LHGQ+ E + LALF+I P PS+LEI K + F++KH+LD +
Sbjct: 94 LKFQGRLKYLHGQSIVGEDGSRVQSQLALFSIAVPVQTPSILEIRTKTLTFQTKHQLDFT 153
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVA 324
+ +D RGK++LGYS+ E+ G GY +H D+ Y A
Sbjct: 154 PMGIDTRGKVVLGYSELEICMRGSGYQFIHAADMMYCA 191
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 15/72 (20%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMW----NSFLPPESAGISLQECFLQ---------- 619
+SD+VHQSVYEL+H++DR + QL + + + +S +C
Sbjct: 7 QSDVVHQSVYELIHTDDRGMFREQLHFALNPKLYATEQGGDVSALQCSSDQVNYDPERLP 66
Query: 620 -ENSYLLERSFT 630
ENS LERSF
Sbjct: 67 PENSSFLERSFV 78
>gi|395843246|ref|XP_003794406.1| PREDICTED: neuronal PAS domain-containing protein 2 [Otolemur
garnettii]
Length = 1035
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 467 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 526
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 527 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 564
>gi|391337762|ref|XP_003743234.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Metaseiulus occidentalis]
Length = 386
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 269 LEIPHKEVM-FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
L IP + F S++ L+ + +D R ++GY E+ GYD H DDL + H
Sbjct: 234 LMIPDGTTLEFMSRYSLEWKFLLLDNRAADIIGYLPFEIIGTSGYDYYHIDDLPKIVQGH 293
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEE 380
+ LL+TG YRF+T W WLQT + Y+ NSKP++++ THR L E
Sbjct: 294 RTLLQTGEGTSCHYRFRTKGSQWVWLQTRYYISYQQWNSKPEYIVCTHRVLSYSE 348
>gi|270001213|gb|EEZ97660.1| hypothetical protein TcasGA2_TC016205 [Tribolium castaneum]
Length = 314
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 1 MGLVAVGHSLPPSAITEIKLHANMFMFRASLDLKLIFLDARVAQLTGYEPQDLIEKTLYH 60
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + AH +LL G YRF + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 61 YIHGSDIMPMRFAHHQLLCKGQVTTKYYRFLSKGGGWVWMQSYATIVHNSRSSRPHCIVS 120
Query: 372 THRPLMEEEGRDLL 385
+ L + EG+DLL
Sbjct: 121 VNYVLSDLEGKDLL 134
>gi|283806548|ref|NP_001164531.1| clock [Acyrthosiphon pisum]
gi|283483350|emb|CAX37105.1| clock [Acyrthosiphon pisum]
Length = 613
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 240 KILHGQNRKLEEP--------PLALFAICTPFGPPSLLEIPHKEVM---FKSKHKLDLSL 288
+I HG N K+ P L I P L E+P E + F S+H L+
Sbjct: 215 EIYHGDNLKMSSPFNSDEDDQNLVFVGIGRIMTPQLLKELPVMEDIKSEFTSRHSLEWKF 274
Query: 289 VSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDG 348
+ +D RG ++GY E+ GY+ H DDL V +HQ L+ G YRF T
Sbjct: 275 LFLDHRGPSIIGYMPFEVLGTSGYEYYHIDDLEDVILSHQALMLKGEGTSCYYRFLTKGQ 334
Query: 349 GWQWLQTSSRLVYK--NSKPDFVISTHRPL 376
W WLQ+ + Y NSKP+F++ H+ +
Sbjct: 335 QWIWLQSRYYISYHQWNSKPEFIVCHHQVI 364
>gi|81916242|sp|Q91YB2.1|CLOCK_SPACA RecName: Full=Circadian locomoter output cycles protein kaput
gi|16549042|emb|CAC85404.1| clock protein [Spalax carmeli]
Length = 865
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S DA + S S SD
Sbjct: 386 RRELGIEESLPDAAADKSQDSGSD 409
>gi|190337520|gb|AAI63440.1| Epas1 protein [Danio rerio]
Length = 834
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +K+ +G ++ +EPPL + +C P PS ++ P F S+H +D+
Sbjct: 191 LHCTGHLKVCNGCPARVLCGFKEPPLTCVVMMCEPIVHPSNIDTPLDSKTFLSRHSMDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY+ +L Y+ H D V +HQ L G + YR +
Sbjct: 251 YTYCDERVTELMGYNPEDLLGRSAYEFYHALDAENVTKSHQNLCTKGQAVSGQYRMLAKN 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSY 405
GG+ W++T ++Y +NS+P ++ + L + E + L+ +MD S N +
Sbjct: 311 GGYVWVETRGTVIYNSRNSQPQCIVCVNYVLSDVEEKSLI--FSMDQTESLFKPHKLNGF 368
Query: 406 FSDSDQL 412
FS + L
Sbjct: 369 FSPKEAL 375
>gi|410915566|ref|XP_003971258.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Takifugu
rubripes]
Length = 912
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H++L++ G
Sbjct: 318 FTSRHSLEWKFLFLDHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGK 377
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
YRF T W WLQT + Y NSKP+F++ TH + E R
Sbjct: 378 SCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHTVVSYAEVR 424
>gi|348538800|ref|XP_003456878.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Oreochromis niloticus]
Length = 982
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H++L++ G
Sbjct: 396 FTSRHSLEWKFLFLDHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGK 455
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
YRF T W WLQT + Y NSKP+F++ TH + E R
Sbjct: 456 SCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHTVVSYAEVR 502
>gi|321468989|gb|EFX79971.1| hypothetical protein DAPPUDRAFT_346996 [Daphnia pulex]
Length = 869
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 267 SLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASA 326
S++++ E F S+H L+ + +D RG ++GY E+ GYD H DDL V++
Sbjct: 285 SIVDVSKSE--FTSRHSLEWKFLFLDHRGPPIIGYLPFEVLGTSGYDYYHVDDLEKVSTC 342
Query: 327 HQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKN--SKPDFVISTHRPL 376
H+ L++ G YRF T W WLQT + Y SKP+F++ +HR +
Sbjct: 343 HEALMQKGEVTSCCYRFLTKGQQWIWLQTKYYITYHQWYSKPEFIVCSHRVI 394
>gi|81916241|sp|Q91YB0.1|CLOCK_SPAGA RecName: Full=Circadian locomoter output cycles protein kaput
gi|16549040|emb|CAC85403.1| clock protein [Spalax galili]
Length = 865
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S DA + S S SD
Sbjct: 386 RRELGIEESLPDAAADKSQDSGSD 409
>gi|326913757|ref|XP_003203200.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Meleagris
gallopavo]
Length = 811
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 243 IVEEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 300
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
+ L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 301 EHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|126337226|ref|XP_001369672.1| PREDICTED: neuronal PAS domain-containing protein 2 [Monodelphis
domestica]
Length = 838
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 251 IVEEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 308
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
+ L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 309 EHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 356
>gi|305682538|dbj|BAJ16353.1| CLOCK [Thermobia domestica]
Length = 522
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 263 FTSRHSLEWKFLFLDHRASPIIGYLPFEVLGTSGYDYYHIDDLEKVVTCHEALMQKGEGT 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVS 395
YRF T W WLQT + Y NSKP+F++ THR + + L K D
Sbjct: 323 SCYYRFLTKGQQWIWLQTRYYITYHQWNSKPEFIVCTHRVVSYADVMKQLRKNNQDSNNK 382
Query: 396 YLDAGLNNSYFSDSDQLTPSHQTLAPSPGSA 426
L + N+ + D + SH+ L +A
Sbjct: 383 LLSSD-NDPVLGNGDSNSSSHKQLQQQQVTA 412
>gi|194749637|ref|XP_001957245.1| GF24152 [Drosophila ananassae]
gi|190624527|gb|EDV40051.1| GF24152 [Drosophila ananassae]
Length = 999
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 266 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 325
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT+ + Y NSKP+ V+ TH+
Sbjct: 326 SCYYRFLTKGQQWIWLQTAYYVTYHTFNSKPEHVVCTHK 364
>gi|166343755|gb|ABY86628.1| hypoxia-inducible factor 1 alpha [Mustelus canis]
Length = 819
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G I++ N + +EPP+ L IC P PS +E+P F S+H LD+
Sbjct: 191 LHCTGHIRVYKSNNEQTHCGYKEPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY EL Y+ H D ++ H +L G + YR +
Sbjct: 251 FSYCDERITELMGYQPEELLGRSVYEFYHAMDSDHLTKTHHDLFTKGQATTGQYRMLGKE 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTH 373
GG+ W++T + ++Y KNS+P ++ +
Sbjct: 311 GGYVWVETQATVIYNSKNSQPQCIVCVN 338
>gi|405952229|gb|EKC20066.1| Endothelial PAS domain-containing protein 1 [Crassostrea gigas]
Length = 746
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
+ GR+K+ +R L IC P S++EI MF S+H L + D
Sbjct: 111 MQCSGRLKMRATASRANSYSVDGLICICRPMQTNSVMEIRLDGSMFISRHDLGMKFTFCD 170
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
R L+GY E+ Y + D V HQ+L+ G+S YRF + W W
Sbjct: 171 PRIATLIGYDPEEVIGKTAYQFHNPLDAKLVGDCHQKLIVKGSSVSNYYRFIGKNCQWVW 230
Query: 353 LQTSSRLVYKNSK-PDFVISTHRPLMEEEGRDLL 385
+QT + ++Y S P +++ + + EEEG L
Sbjct: 231 MQTRATIIYNTSNVPQYIVCMNYIISEEEGEQFL 264
>gi|189241710|ref|XP_967930.2| PREDICTED: similar to Single minded [Tribolium castaneum]
Length = 521
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 MGLVAVGHSLPPSAITEIKLHANMFMFRASLDLKLIFLDARVAQLTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + AH +LL G YRF + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 YIHGSDIMPMRFAHHQLLCKGQVTTKYYRFLSKGGGWVWMQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDLL 385
+ L + EG+DLL
Sbjct: 328 VNYVLSDLEGKDLL 341
>gi|395527146|ref|XP_003765712.1| PREDICTED: neuronal PAS domain-containing protein 2 [Sarcophilus
harrisii]
Length = 849
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 259 IVEEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 316
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
+ L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 317 EHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 364
>gi|166343753|gb|ABY86627.1| hypoxia-inducible factor 1 alpha [Hemiscyllium ocellatum]
Length = 816
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G I++ N + +EPP+ L IC P PS +E+P F S+H LD+
Sbjct: 191 LHCTGHIRVYKSSNEQTHCGYKEPPMTCLILICEPIPHPSNIEVPLDSKTFLSRHSLDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY EL Y+ H D ++ H +L G + YR +
Sbjct: 251 FSYCDERITELMGYQAEELLGRSVYEFYHALDSDHLTKTHHDLFTKGQATTGQYRMLGKE 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTH 373
GG+ W++T + ++Y KNS+P ++ +
Sbjct: 311 GGYVWVETQATVIYNSKNSQPQCIVCVN 338
>gi|71896369|ref|NP_001025713.1| neuronal PAS domain-containing protein 2 [Gallus gallus]
gi|82233988|sp|Q5ZQU2.1|NPAS2_CHICK RecName: Full=Neuronal PAS domain-containing protein 2;
Short=Neuronal PAS2; AltName: Full=Member of PAS protein
4; Short=MOP4
gi|53759154|gb|AAU93340.1| bHLH-PAS clock protein [Gallus gallus]
Length = 815
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 243 IVEEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 300
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
+ L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 301 EHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|126697512|gb|ABO26713.1| hypoxia-inducible factor 1 alpha [Aspius aspius]
Length = 773
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 245 QNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSD 303
++ +EPPL L IC P PS +E+P F S+H LD+ D+R L+GY
Sbjct: 206 EDSGFKEPPLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEP 265
Query: 304 TELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY-- 361
+L N Y+ H D ++ HQ L G + YR GG+ W++T + ++Y
Sbjct: 266 DDLLNRSVYEYYHALDSDHLTKTHQNLFAKGQATTSQYRMMAKKGGFVWVETQATVIYNP 325
Query: 362 KNSKPDFVISTHRPL 376
KNS+P ++ + L
Sbjct: 326 KNSQPQCIVCVNSVL 340
>gi|47222604|emb|CAG02969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 909
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H++L++ G
Sbjct: 756 FTSRHSLEWKFLFLDHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGK 815
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 816 SCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 853
>gi|327281753|ref|XP_003225611.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Anolis carolinensis]
Length = 742
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 220 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQFGKGK 279
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH-----RPLMEEEGRDL-LGKRT 389
YRF T W WLQT + Y NSKP+F++ TH + E RDL L + +
Sbjct: 280 SCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHTVVSYAEVRAERRRDLGLEESS 339
Query: 390 MDFKVSYLDAGLNNSYFSDSDQLTPSHQT 418
++ S L + + F D PS +
Sbjct: 340 VELASSSLKS---HGSFLDIRHCAPSQEA 365
>gi|345494448|ref|XP_001601655.2| PREDICTED: hypothetical protein LOC100117407 [Nasonia vitripennis]
Length = 815
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P + EI MF + LD LV +D L GY EL + Y
Sbjct: 368 VGLVAVGHSLPPSANTEIKLHHNMFMFRASLDFKLVFLDANVPQLTGYESQELVDKTLYH 427
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AHQ LL G YRF T GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 428 YVHVSDAVHLQQAHQILLCKGQVTTRYYRFLTRTGGWVWMQSYATIVHNSRSSRPHCIVS 487
Query: 372 THRPLMEEEGRDLL 385
+ L + EG+DL+
Sbjct: 488 VNYVLSQIEGKDLV 501
>gi|209418766|gb|ACI46598.1| clock-2a protein [Haplochromis burtoni]
Length = 431
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H++L++ G
Sbjct: 284 FTSRHSLEWKFLFLDHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGK 343
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
YRF T W WLQT + Y NSKP+F++ TH + E R
Sbjct: 344 SCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHTVVSYAEVR 390
>gi|3914160|sp|P97460.1|NPAS2_MOUSE RecName: Full=Neuronal PAS domain-containing protein 2;
Short=Neuronal PAS2
gi|1840058|gb|AAB47249.1| neuronal PAS2 [Mus musculus]
Length = 816
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GY+ H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYNYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|449267860|gb|EMC78751.1| Neuronal PAS domain-containing protein 2, partial [Columba livia]
Length = 674
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEV---MFKSKHKLDLSLVSMDQRGKMLLGYSD 303
R E + L A P L E+ + E F S+H L+ + +D R ++GY
Sbjct: 220 RSATEEQVCLVATVRLVTPQFLKELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLP 279
Query: 304 TELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK- 362
E+ GYD H DDL +A H+ L++ G YRF T W WLQT + Y
Sbjct: 280 FEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQ 339
Query: 363 -NSKPDFVISTH-------------RPLMEEEGRDLLGKRTMDFKVSYLDAG 400
NSKP+F++ TH R L EE L ++ SYLD G
Sbjct: 340 WNSKPEFIVCTHLVVSYAEVRAERRRDLGLEESSIELASSSLKSHSSYLDVG 391
>gi|340719080|ref|XP_003397985.1| PREDICTED: hypothetical protein LOC100650446 [Bombus terrestris]
Length = 733
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 263 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVTCHESLMQKGEGT 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 323 SCYYRFLTKGQQWIWLQTRFYITYNQWNSKPEFIVCTH 360
>gi|301610093|ref|XP_002934591.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 753
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 251 EPPLALFAICTPFGPPSLLEIPHKEV---MFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
E + L A P L E+ + E F S+H L+ + +D R ++GY E+
Sbjct: 223 EEQICLVATVRLVTPQFLKELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVL 282
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSK 365
GYD H DDL +A H+ L++ G YRF T W WLQT + Y NSK
Sbjct: 283 GTSGYDYYHADDLELLARCHEHLMQCGKGKSCYYRFLTKGQQWIWLQTHYFITYHQWNSK 342
Query: 366 PDFVISTH-----RPLMEEEGRDL 384
P+F++ TH + E+ RDL
Sbjct: 343 PEFIVCTHTVVSYAEVRAEKRRDL 366
>gi|326924642|ref|XP_003208534.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Meleagris
gallopavo]
Length = 688
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEV---MFKSKHKLDLSLVSMDQRGKMLLGYSD 303
R E + L A P L E+ + E F S+H L+ + +D R ++GY
Sbjct: 242 RSATEEQICLVATVRLVTPQFLKELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLP 301
Query: 304 TELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK- 362
E+ GYD H DDL +A H+ L++ G YRF T W WLQT + Y
Sbjct: 302 FEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQ 361
Query: 363 -NSKPDFVISTH-----RPLMEEEGRDL--------LGKRTMDFKVSYLDAG 400
NSKP+F++ TH + E+ RDL L ++ SYL+ G
Sbjct: 362 WNSKPEFIVCTHLVVSYAEVRAEKRRDLGLEESSIELASSSVKSHGSYLEVG 413
>gi|170048706|ref|XP_001870745.1| single-minded [Culex quinquefasciatus]
gi|167870723|gb|EDS34106.1| single-minded [Culex quinquefasciatus]
Length = 802
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ P ++ EI + MF + +DL L+ +D + L GY +L Y
Sbjct: 347 LGLVAVGHSLPPSAITEIKLHQNMFMFRASMDLKLIFLDAKVAQLTGYEPQDLIEKTLYQ 406
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ L+ G YRF T GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 407 YIHAADILQMRYSHQILMFKGQVTTKYYRFLTKGGGWTWVQSYATVVHNTRSSRPHCIVS 466
Query: 372 THRPLMEEEGRDLL 385
+ L ++E RDLL
Sbjct: 467 VNYVLSDQEARDLL 480
>gi|449483659|ref|XP_002193890.2| PREDICTED: neuronal PAS domain-containing protein 2 [Taeniopygia
guttata]
Length = 833
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
>gi|350423284|ref|XP_003493431.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Bombus
impatiens]
Length = 733
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 263 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVTCHESLMQKGEGT 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 323 SCYYRFLTKGQQWIWLQTRFYITYNQWNSKPEFIVCTH 360
>gi|195168331|ref|XP_002024985.1| GL17825 [Drosophila persimilis]
gi|194108415|gb|EDW30458.1| GL17825 [Drosophila persimilis]
Length = 1039
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H DDL + + H+EL +TG
Sbjct: 262 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHVDDLDNIVACHEELRQTGEGK 321
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y N+KPD+V+ TH
Sbjct: 322 SCYYRFLTKGQQWIWLQTDYFVSYHQFNTKPDYVVCTH 359
>gi|198462706|ref|XP_001352524.2| GA20318 [Drosophila pseudoobscura pseudoobscura]
gi|198150944|gb|EAL30021.2| GA20318 [Drosophila pseudoobscura pseudoobscura]
Length = 1037
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H DDL + + H+EL +TG
Sbjct: 262 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHVDDLDNIVACHEELRQTGEGK 321
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y N+KPD+V+ TH
Sbjct: 322 SCYYRFLTKGQQWIWLQTDYFVSYHQFNTKPDYVVCTH 359
>gi|302745168|gb|ADL62687.1| clock 2, partial [Phreatichthys andruzzii]
Length = 807
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY + GYD H DDL +A H++L++ G
Sbjct: 252 FTSRHSLEWKFLFLDHRASPIIGYLPFGVFGTSGYDYYHVDDLELIAQCHKQLMQCGKGK 311
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVS 395
YRF T W WLQT + Y NSKP+F++ TH + E R +R +F +
Sbjct: 312 SCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVR---AERRREFGLE 368
Query: 396 YLDAGLNNS 404
+ + S
Sbjct: 369 ETSSDMAKS 377
>gi|443497931|dbj|BAM76759.1| CLOCK [Gryllus bimaculatus]
Length = 594
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 268 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLEKVVTCHEALMQKGEGT 327
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPL 376
YRF T W WLQT + Y NSKP+F++ THR +
Sbjct: 328 SCHYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 368
>gi|358412691|ref|XP_003582378.1| PREDICTED: circadian locomoter output cycles protein kaput, partial
[Bos taurus]
Length = 672
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 96 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 153
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 154 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRA-ER 212
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 213 RRELGIEESLPETAADKSQDSGSD 236
>gi|164698400|ref|NP_001106937.1| clock [Tribolium castaneum]
gi|140270858|gb|ABO86537.1| CLOCK [Tribolium castaneum]
gi|270004792|gb|EFA01240.1| clock [Tribolium castaneum]
Length = 581
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY EL GYD H DDL + H+ L++ G
Sbjct: 235 FTSRHSLEWKFLFLDHRAPPIIGYLPFELLGTSGYDYYHVDDLDNIIIGHKALMQKGEGT 294
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKP+F++ THR
Sbjct: 295 SCFYRFLTKGQQWIWLQTRYYITYHQWNSKPEFIVCTHR 333
>gi|334350262|ref|XP_003342332.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Monodelphis domestica]
Length = 814
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 253 PLALFAICTPFGPPSLLEI-----PHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
PL L A P L E+ P +E F S+H L+ + +D R ++GY E+
Sbjct: 300 PLCLVATVRLNTPQLLKEVCPVEEPGEE--FTSRHSLEWKFLYLDHRAPPIIGYLPFEVL 357
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSK 365
GYD H DDL +A H+++++ G YRF T W WLQT + Y NSK
Sbjct: 358 GTSGYDYYHADDLESLARCHKQVMQFGKGKSCYYRFLTKGQQWIWLQTQYYITYHQWNSK 417
Query: 366 PDFVISTHRPL----MEEEGRDLLG 386
P+F++ TH + +E + R LG
Sbjct: 418 PEFIVCTHTVVSHAQIEAKRRQDLG 442
>gi|190338076|gb|AAI62682.1| Clock3 protein [Danio rerio]
Length = 820
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 257 MVEEPNEE--FTSRHSLEWKFLLLDHRAPPIIGYMPFEVLGTSGYDYYHVDDLHSLAKCH 314
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPL----MEEEG 381
+ L++ G YRF T W WLQT+ + Y NS+P+F++ TH + + E
Sbjct: 315 EHLMQFGKGKSCYYRFLTKGQQWIWLQTNYYITYHQWNSRPEFIVCTHTVVSYAEVRAER 374
Query: 382 RDLLG------KRTMDFKVSYLDAGLNNS 404
R +G + T D K+S + LNNS
Sbjct: 375 RREMGIEESPPELTAD-KISGSETQLNNS 402
>gi|195395110|ref|XP_002056179.1| single-minded [Drosophila virilis]
gi|194142888|gb|EDW59291.1| single-minded [Drosophila virilis]
Length = 761
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|148705948|gb|EDL37895.1| circadian locomoter output cycles kaput, isoform CRA_a [Mus
musculus]
Length = 417
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 154 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 211
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 212 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 267
>gi|194741162|ref|XP_001953058.1| GF17581 [Drosophila ananassae]
gi|190626117|gb|EDV41641.1| GF17581 [Drosophila ananassae]
Length = 746
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|195449946|ref|XP_002072296.1| GK22407 [Drosophila willistoni]
gi|194168381|gb|EDW83282.1| GK22407 [Drosophila willistoni]
Length = 743
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|405978067|gb|EKC42482.1| Single-minded-like protein 1 [Crassostrea gigas]
Length = 701
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L AI P ++ E+ MF + LDL L+ +D R L GY +L Y
Sbjct: 206 VGLVAIGHSLPPSAITEMKMFSNMFMFRASLDLKLIFLDARVAQLTGYEPQDLIERTLYQ 265
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ ++ AH LL G YRF DGGW W+Q+ + +V+ ++S+P ++S
Sbjct: 266 YIHACDIVHMKFAHHTLLLKGQVTTKYYRFLAKDGGWVWIQSYATIVHNSRSSRPHCIVS 325
Query: 372 THRPLMEEEGRDL 384
+ L + E R L
Sbjct: 326 VNYVLSDVEARGL 338
>gi|54020803|ref|NP_001005647.1| endothelial PAS domain protein 1 [Xenopus (Silurana) tropicalis]
gi|49250453|gb|AAH74648.1| endothelial PAS domain protein 1 [Xenopus (Silurana) tropicalis]
Length = 862
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 214 KEPVLSCLIMMCQPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ W++T S ++Y +NS+P
Sbjct: 274 RSAYEFYHALDSESMTKSHQNLCAKGQVVTGQYRMLAKHGGYLWVETQSTVIYNTRNSQP 333
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSDSDQ 411
++ + L E E D++ +MD S L NS FS S Q
Sbjct: 334 QCIVCVNYVLSEIEKNDVVF--SMDQTESLFKPHLMTMNSIFSSSVQ 378
>gi|344235895|gb|EGV91998.1| Circadian locomoter output cycles protein kaput [Cricetulus
griseus]
Length = 599
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 4 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 61
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 62 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRA-ER 120
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 121 RRELGIEESLPETAADKSQDSGSD 144
>gi|328779515|ref|XP_394233.4| PREDICTED: neuronal PAS domain-containing protein 2 [Apis
mellifera]
Length = 724
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 263 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVTCHESLMQKGEGT 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 323 SCYYRFLTKGQQWIWLQTRFYITYNQWNSKPEFIVCTH 360
>gi|89886285|ref|NP_001034895.1| endothelial PAS domain-containing protein 1 [Danio rerio]
gi|87242613|gb|ABD33838.1| hypoxia inducible factor 2 alpha [Danio rerio]
Length = 832
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +K+ +G ++ +EPPL + +C P PS ++ P F S+H +D+
Sbjct: 191 LHCTGHLKVCNGCPARVLCGFKEPPLTCVVMMCEPIVHPSNIDTPLDSKTFLSRHSMDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY+ +L Y+ H D V +HQ L G + YR +
Sbjct: 251 YTYCDERVTELMGYNPEDLLGRSAYEFYHALDAENVTKSHQNLCTKGQAVSGQYRMLAKN 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ W++T ++Y +NS+P ++ + L + E + L+
Sbjct: 311 GGYVWVETRGTVIYNSRNSQPQCIVCVNYVLSDVEEKSLI 350
>gi|380013056|ref|XP_003690586.1| PREDICTED: uncharacterized protein LOC100869092 [Apis florea]
Length = 726
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 263 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVTCHESLMQKGEGT 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 323 SCYYRFLTKGQQWIWLQTRFYITYNQWNSKPEFIVCTH 360
>gi|432899506|ref|XP_004076592.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Oryzias
latipes]
Length = 968
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+A + TP L + F S+H L+ + +D R ++GY E+ GYD
Sbjct: 365 IATVRLVTPQFLKDLCNVDDPCDEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYD 424
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVIS 371
H DDL +A H++LL+ G YRF T W WLQT + Y SKP+F++
Sbjct: 425 YYHVDDLELIAQCHKQLLQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWTSKPEFIVC 484
Query: 372 THRPLMEEEGR 382
TH + E R
Sbjct: 485 THTVISYAEVR 495
>gi|395542792|ref|XP_003773309.1| PREDICTED: circadian locomoter output cycles protein kaput
[Sarcophilus harrisii]
Length = 886
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 355 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 412
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 413 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRA-ER 471
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + K S + + S S SD
Sbjct: 472 RRELGIKESLPEIAADKSQDSGSD 495
>gi|195108655|ref|XP_001998908.1| GI23369 [Drosophila mojavensis]
gi|193915502|gb|EDW14369.1| GI23369 [Drosophila mojavensis]
Length = 779
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|432845822|ref|XP_004065870.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Oryzias latipes]
Length = 932
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H ++ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 289 IEEPNEE--FTSRHSMEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLEMLAKCHE 346
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
LL+ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 347 HLLQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 402
>gi|307168572|gb|EFN61630.1| Circadian locomoter output cycles protein kaput [Camponotus
floridanus]
Length = 702
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 247 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNVVTCHESLMQKGEGT 306
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 307 SCYYRFLTKGQQWIWLQTRFYITYNQWNSKPEFIVCTH 344
>gi|198451724|ref|XP_002137347.1| GA26599 [Drosophila pseudoobscura pseudoobscura]
gi|198131616|gb|EDY67905.1| GA26599 [Drosophila pseudoobscura pseudoobscura]
Length = 767
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|403284624|ref|XP_003933662.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Saimiri boliviensis boliviensis]
gi|403284626|ref|XP_003933663.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Saimiri boliviensis boliviensis]
Length = 845
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S +A + S S SD
Sbjct: 386 RRELGIEESLPEAAADKSQDSGSD 409
>gi|157128070|ref|XP_001661300.1| single-minded [Aedes aegypti]
gi|108872709|gb|EAT36934.1| AAEL011013-PA [Aedes aegypti]
Length = 715
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ P ++ EI + MF + +DL L+ +D + L GY +L Y
Sbjct: 247 LGLVAVGHSLPPSAITEIKLHQNMFMFRASMDLKLIFLDAKVAQLTGYEPQDLIEKTLYQ 306
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ ++ +HQ L+ G YRF T GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 307 YIHASDILHMRYSHQILMYKGQVTTKYYRFLTKGGGWTWVQSYATVVHNTRSSRPHCIVS 366
Query: 372 THRPLMEEEGRDLL 385
+ L ++E DLL
Sbjct: 367 VNYVLSKQEAHDLL 380
>gi|195500692|ref|XP_002097482.1| GE26246 [Drosophila yakuba]
gi|194183583|gb|EDW97194.1| GE26246 [Drosophila yakuba]
Length = 699
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|194901552|ref|XP_001980316.1| GG19445 [Drosophila erecta]
gi|190652019|gb|EDV49274.1| GG19445 [Drosophila erecta]
Length = 698
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|198420580|ref|XP_002119436.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 641
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ + A+ SL ++ MF + LD L+ MDQ+ LLG+ +L Y
Sbjct: 210 VGVLALGQSLPATSLTDVKLYSNMFMFRASLDFKLIFMDQQVSSLLGFEPQDLIEKTLYH 269
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH DL ++ +HQ+LL G YRF T GGW W+Q+ +V+ ++S+P ++S
Sbjct: 270 YVHAGDLFHLKESHQKLLNKGQVKTKYYRFLTRHGGWVWVQSHVTIVHNSRSSRPHCIVS 329
Query: 372 THRPLMEEEGRDLL 385
+ + + E RD++
Sbjct: 330 VNYVISDVEKRDIV 343
>gi|195145848|ref|XP_002013902.1| GL24392 [Drosophila persimilis]
gi|194102845|gb|EDW24888.1| GL24392 [Drosophila persimilis]
Length = 764
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|220942606|gb|ACL83846.1| sim-PA [synthetic construct]
Length = 689
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|3769480|gb|AAC64519.1| single-minded protein [Drosophila melanogaster]
Length = 643
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 202 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 261
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 262 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 321
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 322 VNYVLSEREVKDLV 335
>gi|28571685|ref|NP_524340.2| single-minded, isoform A [Drosophila melanogaster]
gi|21744281|gb|AAM76199.1| RE54280p [Drosophila melanogaster]
gi|28381286|gb|AAF54902.3| single-minded, isoform A [Drosophila melanogaster]
Length = 688
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|31077159|sp|P05709.3|SIM_DROME RecName: Full=Protein single-minded
Length = 697
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|195571241|ref|XP_002103612.1| GD18883 [Drosophila simulans]
gi|194199539|gb|EDX13115.1| GD18883 [Drosophila simulans]
Length = 697
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|332021701|gb|EGI62057.1| Circadian locomoter output cycles protein kaput [Acromyrmex
echinatior]
Length = 699
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 285 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNVVTCHESLMQKGEGT 344
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 345 SCYYRFLTKGQQWIWLQTRFYITYNQWNSKPEFIVCTH 382
>gi|45551885|ref|NP_731771.3| single-minded, isoform B [Drosophila melanogaster]
gi|45446472|gb|AAN14343.3| single-minded, isoform B [Drosophila melanogaster]
Length = 664
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 232 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 291
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 292 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 351
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 352 VNYVLSEREVKDLV 365
>gi|81916239|sp|Q91YA8.1|CLOCK_SPAJD RecName: Full=Circadian locomoter output cycles protein kaput
gi|16549044|emb|CAC85405.1| clock protein [Spalax judaei]
Length = 865
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S DA + S SD
Sbjct: 386 RRELGIEESLPDATADKGQDSGSD 409
>gi|296196517|ref|XP_002745868.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Callithrix jacchus]
Length = 850
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S +A + S S SD
Sbjct: 386 RRELGIEESLPEAAADKSQDSGSD 409
>gi|449498961|ref|XP_002193300.2| PREDICTED: neuronal PAS domain-containing protein 2-like
[Taeniopygia guttata]
Length = 615
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEV---MFKSKHKLDLSLVSMDQRGKMLLGYSD 303
R E + L A P L E+ + E F S+H L+ + +D R ++GY
Sbjct: 219 RSATEEQICLVATVLLVTPQFLKELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLP 278
Query: 304 TELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK- 362
E+ GYD H DDL +A H+ L++ G YRF T W WLQT + Y
Sbjct: 279 FEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQ 338
Query: 363 -NSKPDFVISTH 373
NSKP+F++ TH
Sbjct: 339 WNSKPEFIVCTH 350
>gi|442618830|ref|NP_001262527.1| single-minded, isoform C [Drosophila melanogaster]
gi|440217377|gb|AGB95909.1| single-minded, isoform C [Drosophila melanogaster]
Length = 675
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 243 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 302
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 303 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 362
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 363 VNYVLSEREVKDLV 376
>gi|339283906|gb|AEJ38222.1| clock [Spodoptera exigua]
Length = 411
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H+DDL V + H+ L++ G
Sbjct: 244 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVTCHEALMQKGELT 303
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPL--------MEEEG 381
YRF T W WLQT + Y NSKP+FV+ T R + M++EG
Sbjct: 304 SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTRRVVSYADIAKSMKQEG 357
>gi|307193316|gb|EFN76178.1| Circadian locomoter output cycles protein kaput [Harpegnathos
saltator]
Length = 617
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 247 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNVVTCHESLMQKGEGT 306
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 307 SCYYRFLTKGQQWIWLQTRFYITYNQWNSKPEFIVCTH 344
>gi|326919174|ref|XP_003205857.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Meleagris gallopavo]
Length = 873
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + F+ S + + S S SD
Sbjct: 386 RRELGFEESLPEIKADKSQDSGSD 409
>gi|30231242|ref|NP_840080.1| clock homolog 3 [Danio rerio]
gi|21685552|dbj|BAC02687.1| bHLH-PAS transcription factor [Danio rerio]
Length = 813
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 257 MVEEPNEE--FTSRHSLEWKFLLLDHRAPPIIGYMPFEVLGTSGYDYYHVDDLHSLAKCH 314
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
+ L++ G YRF T W WLQT+ + Y NS+P+F++ TH + E R
Sbjct: 315 EHLMQFGKGKSCYYRFLTKGQQWIWLQTNYYITYHQWNSRPEFIVCTHTVVSYAEVR 371
>gi|281340205|gb|EFB15789.1| hypothetical protein PANDA_008040 [Ailuropoda melanoleuca]
Length = 810
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 234 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 291
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 292 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 350
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 351 RRELGIEESLPETAADKSQDSGSD 374
>gi|442618832|ref|NP_001262528.1| single-minded, isoform D [Drosophila melanogaster]
gi|440217378|gb|AGB95910.1| single-minded, isoform D [Drosophila melanogaster]
Length = 672
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 240 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 299
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 300 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 359
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 360 VNYVLSEREVKDLV 373
>gi|195037447|ref|XP_001990172.1| GH18379 [Drosophila grimshawi]
gi|193894368|gb|EDV93234.1| GH18379 [Drosophila grimshawi]
Length = 774
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ S+ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 256 LGLVAVGHSLPSSSITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 316 YIHAADIMPMRCSHQILLYKGQVTSKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 376 VNYVLSEREVKDLV 389
>gi|83583630|gb|ABC24677.1| hypoxia inducible factor 1 alpha [Carassius carassius]
Length = 776
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 210 FKEPPLTYLVVICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 269
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ WL+T + ++Y KNS+
Sbjct: 270 NRSVYEYYHALDSDHLTKTHNNLFAKGQATTGQYRMLAKKGGFVWLETQATVIYNPKNSQ 329
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 330 PQCIVCVN 337
>gi|383865803|ref|XP_003708362.1| PREDICTED: uncharacterized protein LOC100878984 [Megachile
rotundata]
Length = 724
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V H+ L++ G
Sbjct: 263 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVMCHESLMQKGEGT 322
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 323 SCYYRFLTKGQQWIWLQTRFYITYNQWNSKPEFIVCTH 360
>gi|195329352|ref|XP_002031375.1| GM24085 [Drosophila sechellia]
gi|194120318|gb|EDW42361.1| GM24085 [Drosophila sechellia]
Length = 632
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 191 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 250
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 251 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 310
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 311 VNYVLSEREVKDLV 324
>gi|158465|gb|AAA28900.1| sim nuclear protein, partial [Drosophila melanogaster]
Length = 655
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ ++ EI + MF + KLD+ L+ D R L GY +L Y
Sbjct: 214 LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 273
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ + +HQ LL G YRF T GGW W+Q+ + LV+ ++S+ F++S
Sbjct: 274 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 333
Query: 372 THRPLMEEEGRDLL 385
+ L E E +DL+
Sbjct: 334 VNYVLSEREVKDLV 347
>gi|125654604|gb|AAZ95453.2| hypoxia-inducible factor [Dicentrarchus labrax]
Length = 754
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ L IC P PS +E+P F S+H +D+ D+R L+GY +L N
Sbjct: 214 KEPPIPYLVLICDPVPHPSNIEVPLDSKTFLSRHTMDMKFTYCDERITELMGYDPEDLLN 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ HQ L G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSVYEYYHAQDSDHLTKTHQNLFAKGQVCTGQYRMLAKRGGFVWVETQATVIYNNKNSQP 333
Query: 367 DFVISTHRPL--MEEEGRDLLGKRTMDFK 393
V+ + L ++EE L ++ D K
Sbjct: 334 QCVVCVNFVLSGIQEEKLILSLEQIEDVK 362
>gi|326919172|ref|XP_003205856.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Meleagris gallopavo]
Length = 850
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + F+ S + + S S SD
Sbjct: 386 RRELGFEESLPEIKADKSQDSGSD 409
>gi|325513893|gb|ADZ23995.1| hypoxia-inducible factor 2a [Myxocyprinus asiaticus]
Length = 782
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G++K+ +G + +EPPL + +C P PS ++ P F S+H +D+
Sbjct: 191 LHCTGQLKVYNGCPAHVLCGFKEPPLTCVVMMCEPIPHPSNIDTPLDSKTFLSRHSMDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D R L+GY+ +L Y+ H D V +HQ L G + YR
Sbjct: 251 FTYCDDRVTELMGYNPEDLLGRSAYEFYHALDSDSVTKSHQNLCTKGQAVSGQYRMLAKH 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSY 405
GG+ W++T ++Y +NS+P ++ + L + E + ++ ++D S L +S+
Sbjct: 311 GGYVWVETQGTVIYNSRNSQPQCIVCVNYVLSDIEEKSII--FSLDQTESLLKPQHLSSF 368
Query: 406 FS-----DSDQL------TPSHQT-LAPSPG 424
FS DS++L P T LAP+PG
Sbjct: 369 FSPSKGLDSEELYNKLKEEPEDLTQLAPTPG 399
>gi|363732683|ref|XP_420353.3| PREDICTED: neuronal PAS domain-containing protein 2-like [Gallus
gallus]
Length = 861
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEV---MFKSKHKLDLSLVSMDQRGKMLLGYSD 303
R E + L A P L E+ + E F S+H L+ + +D R ++GY
Sbjct: 467 RSATEEQICLVATVRLVTPQFLKELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLP 526
Query: 304 TELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK- 362
E+ GYD H DDL +A H+ L++ G YRF T W WLQT + Y
Sbjct: 527 FEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQ 586
Query: 363 -NSKPDFVISTH 373
NSKP+F++ TH
Sbjct: 587 WNSKPEFIVCTH 598
>gi|347964476|ref|XP_311311.5| AGAP000773-PA [Anopheles gambiae str. PEST]
gi|333467549|gb|EAA06894.5| AGAP000773-PA [Anopheles gambiae str. PEST]
Length = 1045
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ P ++ EI + MF + +DL L+ +D + L GY +L Y
Sbjct: 251 LGLVAVGHSLPPSAITEIKLYQNMFMFRASMDLKLIFLDAKVAQLTGYEPQDLIEKTLYQ 310
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ +HQ L+ G YRF T GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 311 YVHAADILHMRYSHQVLMYKGQVTTKYYRFLTKGGGWAWVQSYATVVHNTRSSRPHCIVS 370
Query: 372 THRPLMEEEGRDLL 385
+ L ++E +DLL
Sbjct: 371 VNYVLSDQEAQDLL 384
>gi|41053885|ref|NP_956527.1| hypoxia-inducible factor 1-alpha [Danio rerio]
gi|28422764|gb|AAH46875.1| Hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) b [Danio rerio]
gi|182892028|gb|AAI65712.1| Hif1ab protein [Danio rerio]
Length = 533
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 233 LDIRGRIKILHG----QNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +++ G ++ +EPP+ L IC P PS +E+P F S+H LD+
Sbjct: 192 LHCAGHVRVHEGSEASEDSGFKEPPVTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMK 251
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY +L N Y+ H D ++ H L G + YR
Sbjct: 252 FSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKK 311
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVIST 372
GG+ W++T + ++Y KNS+P ++
Sbjct: 312 GGFVWVETQATVIYNPKNSQPQCIVCV 338
>gi|327273712|ref|XP_003221624.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Anolis carolinensis]
Length = 916
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 254 LALFAICTP--FGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGG 311
+A + TP S +E P++E F S+H L+ + +D R ++GY E+ G
Sbjct: 312 VATIRLATPQFIKEMSTVEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG 369
Query: 312 YDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFV 369
YD H DDL +A H+ L++ G YRF T W WLQT + Y NS+P+F+
Sbjct: 370 YDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI 429
Query: 370 ISTHRPLMEEEGR 382
+ TH + E R
Sbjct: 430 VCTHTVVSYAEVR 442
>gi|301767998|ref|XP_002919413.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Ailuropoda melanoleuca]
Length = 845
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|149035206|gb|EDL89910.1| clock homolog (mouse), isoform CRA_b [Rattus norvegicus]
Length = 833
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|348531168|ref|XP_003453082.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oreochromis
niloticus]
Length = 766
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 243 HGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYS 302
G N + E P L IC P PS +E+P F S+H +D+ D+R L+GY
Sbjct: 207 EGTNGQKEPPVPYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITDLMGYD 266
Query: 303 DTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY- 361
+L + Y+ H D ++ H L G YR GG+ W++T + ++Y
Sbjct: 267 PEDLLDRSVYEYYHALDSDHLTKTHHNLFAKGQVCTGQYRMLAKKGGFVWVETQATVIYN 326
Query: 362 -KNSKPDFVISTHRPL--MEEEGRDLLGKRTMDFK 393
KNS+P V+ + L ++EE L K+T D K
Sbjct: 327 NKNSQPQCVVCVNFVLSGIQEEKLILSVKQTADVK 361
>gi|334331253|ref|XP_001370711.2| PREDICTED: circadian locomoter output cycles protein kaput
[Monodelphis domestica]
Length = 858
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + K S + + S S SD
Sbjct: 386 RRELGIKESLPEIAADKSQDSGSD 409
>gi|149035205|gb|EDL89909.1| clock homolog (mouse), isoform CRA_a [Rattus norvegicus]
Length = 863
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|321117670|gb|ADW54530.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys nobilis]
Length = 719
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 177 FKEPPLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 236
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 237 NKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQATVIYNPKNSQ 296
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 297 PQCIVCVN 304
>gi|6478192|gb|AAF13733.1| clock [Homo sapiens]
Length = 845
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|291401787|ref|XP_002717213.1| PREDICTED: clock [Oryctolagus cuniculus]
Length = 853
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|207667156|gb|ACI25086.1| aromatic hydrocarbon receptor [Microgadus tomcod]
gi|207667158|gb|ACI25087.1| aromatic hydrocarbon receptor [Microgadus tomcod]
gi|207667160|gb|ACI25088.1| aromatic hydrocarbon receptor [Microgadus tomcod]
Length = 72
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 311 GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVI 370
GY +H D+ Y A H ++KTG SG+ +R + GW W+Q +++LVYK +PDF+I
Sbjct: 1 GYQFIHAADMMYCADNHLRMIKTGESGLTVFRLLSKSSGWVWVQANAKLVYKGGRPDFII 60
Query: 371 STHRPLMEEEG 381
+ R L+ EG
Sbjct: 61 ARQRALVNAEG 71
>gi|148227427|ref|NP_001085718.1| endothelial PAS domain protein 1 [Xenopus laevis]
gi|49118238|gb|AAH73244.1| MGC80589 protein [Xenopus laevis]
Length = 862
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 213 FKEPILSCLIMMCQPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRIIELIGYHPEELL 272
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
Y+ H D + +HQ L G YR GG+ W++T ++Y +NS+
Sbjct: 273 GRSAYEFYHALDSENMTKSHQNLCAKGQVVTGHYRMLAKHGGYLWVETQGTVIYNTRNSQ 332
Query: 366 PDFVISTHRPLMEEEGRDLLGKRTMD-----FKVSYLDAGLNNSYFSDSDQ 411
P ++ + L E E D++ +MD FK +L NS FS S Q
Sbjct: 333 PQCIVCVNYVLSEIEKNDVVF--SMDQTESLFKPHFLTM---NSIFSSSVQ 378
>gi|355687417|gb|EHH26001.1| hypothetical protein EGK_15877, partial [Macaca mulatta]
Length = 816
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 234 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 291
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 292 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRA-ER 350
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 351 RRELGIEESLPETAADKSQDSGSD 374
>gi|345497761|ref|XP_001599257.2| PREDICTED: circadian locomoter output cycles protein kaput-like
[Nasonia vitripennis]
Length = 728
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH L+ + +D R ++GY E+ GYD H DDL V + H+ L+K G
Sbjct: 264 FTSKHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLDKVVTCHESLMKKGEGT 323
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y +S P+F++ TH
Sbjct: 324 SCYYRFLTKGQQWIWLQTRFYITYNQWHSNPEFIVCTH 361
>gi|390136660|pdb|4F3L|A Chain A, Crystal Structure Of The Heterodimeric Clock:bmal1
Transcriptional Activator Complex
Length = 361
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 246 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 303
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 304 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 359
>gi|407316746|gb|AFU07555.1| hypoxia-inducible factor 1 alpha subunit [Hypophthalmichthys
nobilis]
Length = 774
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 210 FKEPPLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 269
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 270 NKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQATVIYNPKNSQ 329
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 330 PQCIVCVN 337
>gi|440903376|gb|ELR54047.1| hypothetical protein M91_21411, partial [Bos grunniens mutus]
Length = 829
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 254 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 311
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 312 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 370
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 371 RRELGIEESLPETAADKSQDSGSD 394
>gi|37359900|dbj|BAC97928.1| mKIAA0334 protein [Mus musculus]
Length = 857
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 271 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 328
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 329 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 387
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 388 RRELGIEESLPETAADKSQDSGSD 411
>gi|410957611|ref|XP_003985419.1| PREDICTED: circadian locomoter output cycles protein kaput [Felis
catus]
Length = 843
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|354499225|ref|XP_003511711.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Cricetulus griseus]
Length = 864
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|321117666|gb|ADW54528.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys molitrix]
Length = 719
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 177 FKEPPLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 236
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 237 NKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQATVIYNPKNSQ 296
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 297 PQCIVCVN 304
>gi|444245669|gb|AGD94516.1| clock, partial [Solenopsis invicta]
Length = 673
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL V + H+ L++ G
Sbjct: 265 FISRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNVVTCHESLMQKGEGT 324
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 325 SCYYRFLTKGQQWIWLQTRFYITYNQWNSKPEFIVCTH 362
>gi|15822818|dbj|BAB68768.1| CLOCK-S [Rattus norvegicus]
Length = 832
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGVEESLPETAADKSQDSGSD 409
>gi|11177898|ref|NP_068628.1| circadian locomoter output cycles protein kaput [Rattus norvegicus]
gi|81917913|sp|Q9WVS9.1|CLOCK_RAT RecName: Full=Circadian locomoter output cycles protein kaput;
Short=rCLOCK
gi|5263200|dbj|BAA81819.1| CLOCK [Rattus norvegicus]
Length = 862
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGVEESLPETAADKSQDSGSD 409
>gi|225904228|gb|ACO35259.1| hypoxia-inducible factor-1-alpha [Pseudorasbora parva]
Length = 774
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ + D+R L+GY +L
Sbjct: 210 FKEPPLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKVSYCDERITELMGYEPDDLL 269
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 270 NRSVYEYYHALDSDHLTKTHHNLFTKGQATTGQYRMMAEKGGFVWVETQATVIYNPKNSQ 329
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 330 PQCIVCVN 337
>gi|300087115|gb|ADJ67806.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys molitrix]
Length = 774
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 210 FKEPPLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 269
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 270 NKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQATVIYNPKNSQ 329
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 330 PQCIVCVN 337
>gi|449273411|gb|EMC82905.1| Circadian locomoter output cycles protein kaput, partial [Columba
livia]
Length = 633
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 49 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 106
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 107 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 162
>gi|321476879|gb|EFX87839.1| hypothetical protein DAPPUDRAFT_311851 [Daphnia pulex]
Length = 839
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ P ++ E+ MF + LDL L+ +D R L GY +L Y
Sbjct: 225 LGLVAVGHSLPPSAITELKLHSNMFMFRASLDLRLIFLDARVAHLTGYEPQDLIEKTLYQ 284
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H DL ++ AH LL G YRF T DGGW W+Q+ + +V+ ++S+P +++
Sbjct: 285 YIHVGDLLHMRFAHHTLLFKGQVTTKYYRFLTRDGGWVWMQSYATIVHNSRSSRPHCIVA 344
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 345 VNYVLSDVEAQSL 357
>gi|297292899|ref|XP_002804151.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Macaca mulatta]
Length = 823
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|7106459|ref|NP_031741.1| circadian locomoter output cycles protein kaput [Mus musculus]
gi|5921794|sp|O08785.1|CLOCK_MOUSE RecName: Full=Circadian locomoter output cycles protein kaput;
Short=mCLOCK
gi|4836806|gb|AAD30565.1|AF146793_2 CLOCK [Mus musculus]
gi|2114488|gb|AAC53200.1| CLOCK [Mus musculus]
gi|148705949|gb|EDL37896.1| circadian locomoter output cycles kaput, isoform CRA_b [Mus
musculus]
gi|151556646|gb|AAI48469.1| Circadian locomoter output cycles kaput [synthetic construct]
gi|162318658|gb|AAI56742.1| Circadian locomoter output cycles kaput [synthetic construct]
Length = 855
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|390358832|ref|XP_003729347.1| PREDICTED: uncharacterized protein LOC100891430 [Strongylocentrotus
purpuratus]
Length = 1248
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 35/255 (13%)
Query: 177 GHINYPSQEIKKYNGDPLKSLAEMNTIGENKWKESPPVVSP-----------KSYYQSYN 225
GH + +++ + P + +N E K KE PVV+ KS +
Sbjct: 159 GHQTFKGYGMERPDDSP--TAMNINFFDEAKRKEESPVVTDFIQDRHFFLRMKSVVSRRS 216
Query: 226 ENGPSERLDIR-----GRIKILHGQNRK---LEEPPLALFAICTPFGPPSLLEIPHKEVM 277
G + + R GR+K+ N K +E L +C P P +LEI M
Sbjct: 217 IGGKGKVVGYRVVNFSGRLKLKGSSNSKGYSVE----GLICLCRPIQPQPILEIRMDGNM 272
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H LD+S D R L+GY E+ Y + D V+ H +L+ G+S
Sbjct: 273 FMSRHGLDMSFTFCDPRIITLVGYEPHEVIGKTAYQFHNPLDARKVSDCHSKLIVKGSSM 332
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK-NSKPDFVISTHRPLMEEEG-RDLLGKRTMDFKVS 395
YRF G W W+QT + ++Y N+ +V+ + + ++EG R LL +
Sbjct: 333 SKYYRFLGKLGAWVWMQTKATIIYNTNNVAQYVVCMNYVIGKDEGERHLL--------ME 384
Query: 396 YLDAGLNNSYFSDSD 410
+ L SDSD
Sbjct: 385 QMQHSLQGVLMSDSD 399
>gi|395829787|ref|XP_003788024.1| PREDICTED: endothelial PAS domain-containing protein 1 [Otolemur
garnettii]
Length = 912
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 241 LHCTGQVKVYDNCPPHSNLCSYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 300
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D ++ +HQ L G YR
Sbjct: 301 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSEHMTKSHQNLCTKGQVVSGQYRMLAK 360
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P V+ + L E E D++ +MD S L
Sbjct: 361 HGGYVWLETQGTVIYNPRNLQPQCVMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 418
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S ++ S ++ LAP+PG A
Sbjct: 419 NSIFDSSGEVAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 458
>gi|294961104|gb|ADF50043.1| hypoxia-inducible factor 1 alpha [Megalobrama amblycephala]
Length = 774
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 210 FKEPPLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 269
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 270 NRSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQATVIYNPKNSQ 329
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 330 PQCIVCVN 337
>gi|197097814|ref|NP_001125706.1| circadian locomoter output cycles protein kaput [Pongo abelii]
gi|75070732|sp|Q5RAK8.1|CLOCK_PONAB RecName: Full=Circadian locomoter output cycles protein kaput
gi|55728928|emb|CAH91202.1| hypothetical protein [Pongo abelii]
Length = 846
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FASRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELSIEESLPEIAADKSQDSGSD 409
>gi|359066462|ref|XP_002688303.2| PREDICTED: circadian locomoter output cycles protein kaput [Bos
taurus]
Length = 844
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|296486572|tpg|DAA28685.1| TPA: clock-like [Bos taurus]
Length = 845
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|296010952|ref|NP_001083854.2| clock circadian regulator [Xenopus laevis]
gi|6984144|gb|AAF34772.1|AF227985_1 Clock [Xenopus laevis]
Length = 825
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+A + TP + + F S+H L+ + +D R ++GY E+ GYD
Sbjct: 243 VATVRLATPQFIKEMCTVEESNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYD 302
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVIS 371
H DDL +A H+ L++ G YRF T W WLQT + Y NS+P+F++
Sbjct: 303 YYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTRYYITYHQWNSRPEFIVC 362
Query: 372 TH 373
TH
Sbjct: 363 TH 364
>gi|62898830|dbj|BAD97269.1| clock variant [Homo sapiens]
Length = 846
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|407316756|gb|AFU07560.1| hypoxia-inducible factor 1 alpha subunit [Polyodon spathula]
Length = 784
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ ++ IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 214 KEPPMTSMVLICDPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQPEDLLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H +L G + YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSVYEYYHALDSDHLTKTHHDLFAKGQATTGQYRMLAKKGGFVWVETQATVIYNTKNSQP 333
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L G DL+
Sbjct: 334 QCIVCVNYVLSGVVGEDLV 352
>gi|40788216|dbj|BAA20792.2| KIAA0334 [Homo sapiens]
Length = 848
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 271 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 328
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 329 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 387
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 388 RRELGIEESLPETAADKSQDSGSD 411
>gi|345779610|ref|XP_532376.3| PREDICTED: circadian locomoter output cycles protein kaput [Canis
lupus familiaris]
Length = 846
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|332238500|ref|XP_003268437.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Nomascus leucogenys]
gi|332238502|ref|XP_003268438.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Nomascus leucogenys]
Length = 846
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|355749398|gb|EHH53797.1| hypothetical protein EGM_14498 [Macaca fascicularis]
Length = 850
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|195972809|ref|NP_001124404.1| circadian locomoter output cycles protein kaput [Ovis aries]
gi|157780889|gb|ABV71922.1| clock [Ovis aries]
Length = 845
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|321117674|gb|ADW54532.1| hypoxia-inducible factor-1alpha [Pseudorasbora parva]
Length = 719
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 177 FKEPPLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 236
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 237 NRSVYEYYHALDSDHLTKTHHNLFTKGQATTGQYRMMAKKGGFVWVETQATVIYNPKNSQ 296
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 297 PQCIVCVN 304
>gi|114594708|ref|XP_001143582.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Pan troglodytes]
gi|114594718|ref|XP_001144028.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
8 [Pan troglodytes]
gi|397469782|ref|XP_003806520.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Pan paniscus]
gi|397469784|ref|XP_003806521.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Pan paniscus]
gi|410216588|gb|JAA05513.1| clock homolog [Pan troglodytes]
gi|410266798|gb|JAA21365.1| clock homolog [Pan troglodytes]
gi|410290386|gb|JAA23793.1| clock homolog [Pan troglodytes]
gi|410333901|gb|JAA35897.1| clock homolog [Pan troglodytes]
Length = 847
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|4758010|ref|NP_004889.1| circadian locomoter output cycles protein kaput [Homo sapiens]
gi|392841204|ref|NP_001254772.1| circadian locomoter output cycles protein kaput [Homo sapiens]
gi|6166009|sp|O15516.1|CLOCK_HUMAN RecName: Full=Circadian locomoter output cycles protein kaput;
Short=hCLOCK; AltName: Full=Class E basic
helix-loop-helix protein 8; Short=bHLHe8
gi|2275619|gb|AAB83969.1| CLOCK [Homo sapiens]
gi|116496623|gb|AAI26160.1| Clock homolog (mouse) [Homo sapiens]
gi|116496921|gb|AAI26158.1| Clock homolog (mouse) [Homo sapiens]
gi|119625873|gb|EAX05468.1| clock homolog (mouse) [Homo sapiens]
gi|121647006|gb|ABM64208.1| CLOCK [Homo sapiens]
gi|158256848|dbj|BAF84397.1| unnamed protein product [Homo sapiens]
gi|168267306|dbj|BAG09709.1| clock homolog [synthetic construct]
gi|313883870|gb|ADR83421.1| Unknown protein [synthetic construct]
Length = 846
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|73909162|gb|AAH41878.1| CLOCK protein [Homo sapiens]
gi|167773569|gb|ABZ92219.1| clock homolog (mouse) [synthetic construct]
Length = 846
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|335293550|ref|XP_003356992.1| PREDICTED: circadian locomoter output cycles protein kaput [Sus
scrofa]
Length = 407
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|430024072|gb|AGA35555.1| hypoxia inducible factor alpha 1, partial [Etroplus suratensis]
Length = 595
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 233 LDIRGRIKILHGQNRK----LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +++ Q + +EPP+ L IC P PS +E+P F S+H +D+
Sbjct: 75 LHCSGHVRVYDSQTDESISGQKEPPVPYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMK 134
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R LLGY +L N Y+ H D ++ H L G YR
Sbjct: 135 FTYCDERITELLGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLAKR 194
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL--GKRTMDFK 393
GG+ W++T + ++Y KNS+P V+ + L +G ++ ++T D K
Sbjct: 195 GGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQGEKVILSLEQTTDMK 244
>gi|426344403|ref|XP_004038759.1| PREDICTED: circadian locomoter output cycles protein kaput [Gorilla
gorilla gorilla]
Length = 817
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|37499124|gb|AAQ91619.1| hypoxia inducible factor 1 alpha [Danio rerio]
Length = 777
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 233 LDIRGRIKILHG----QNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +++ G ++ +EPP+ L IC P PS +E+P F S+H LD+
Sbjct: 192 LHCAGHVRVHEGSEASEDSGFKEPPVTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMK 251
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY +L N Y+ H D ++ H L G + YR
Sbjct: 252 FSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKK 311
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTH 373
GG+ W++T + ++Y KNS+P ++ +
Sbjct: 312 GGFVWVETQATVIYNPKNSQPQCIVCVN 339
>gi|87204421|gb|ABD32158.1| hypoxia-inducible factor 1 alpha [Micropogonias undulatus]
Length = 752
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ L IC P PS +E+P F S+H +D+ D+R L+GY +L N
Sbjct: 213 KEPPVPYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPDDLLN 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSVYEYYHAQDSDHLTKTHHNLFAKGQVCTGQYRMLAKRGGFVWVETQATVIYNNKNSQP 332
Query: 367 DFVISTHRPL--MEEEGRDLLGKRTMDFK 393
V+ + L ++EE L ++T D K
Sbjct: 333 QCVVCVNFVLSGIQEEKLILSLEQTEDVK 361
>gi|402869776|ref|XP_003898923.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Papio anubis]
gi|402869778|ref|XP_003898924.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Papio anubis]
Length = 847
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|358420903|ref|XP_003584759.1| PREDICTED: circadian locomoter output cycles protein kaput [Bos
taurus]
Length = 508
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKS 280
++S N S G I+ H + + +A + TP + + F S
Sbjct: 219 FKSLNSVSTSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTS 278
Query: 281 KHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIA 340
+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 279 RHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCY 338
Query: 341 YRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 339 YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|380818214|gb|AFE80981.1| circadian locomoter output cycles protein kaput [Macaca mulatta]
Length = 850
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|345324269|ref|XP_001507170.2| PREDICTED: circadian locomoter output cycles protein kaput-like
[Ornithorhynchus anatinus]
Length = 830
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 373
>gi|395843798|ref|XP_003794660.1| PREDICTED: circadian locomoter output cycles protein kaput
[Otolemur garnettii]
Length = 849
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|410898074|ref|XP_003962523.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Takifugu
rubripes]
Length = 755
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L IC P P+ +E P F S+H +D+ D+R L+GY +L N Y+
Sbjct: 220 LVLICDPIPHPANIEFPLDTKTFLSRHTMDMKFTDCDERITELMGYEPEDLLNRSVYEYY 279
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D ++A H L G YR GG+ WL+T + ++Y KNS+P V+ +
Sbjct: 280 HAQDSDHLAKTHHNLFAKGQVCTGQYRMLAKRGGFVWLETQATVIYNTKNSQPQCVVCVN 339
Query: 374 RPL--MEEEGRDLLGKRTMDFK 393
L ++EE L ++T D K
Sbjct: 340 FVLSGIQEEKMVLSLEQTADVK 361
>gi|348529360|ref|XP_003452181.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Oreochromis niloticus]
Length = 887
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 259 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 316
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 317 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 363
>gi|321117678|gb|ADW54534.1| hypoxia-inducible factor-1alpha [Carassius auratus]
Length = 725
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 183 FKEPPLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 242
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 243 NKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQATVIYNPKNSQ 302
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 303 PQCIVCVN 310
>gi|431912714|gb|ELK14732.1| Endothelial PAS domain-containing protein 1 [Pteropus alecto]
Length = 884
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 207 LHCTGQVKVYNNCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 266
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 267 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 326
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 327 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 384
Query: 403 NSYFSDSDQLTPSHQT 418
NS F D+ ++T S ++
Sbjct: 385 NSIFDDNGEMTVSEKS 400
>gi|47219337|emb|CAG10966.1| unnamed protein product [Tetraodon nigroviridis]
Length = 885
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 272 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLEILAKCHE 329
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 330 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 376
>gi|251747935|gb|ABI95425.2| clock-3a protein [Haplochromis burtoni]
Length = 885
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 259 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 316
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 317 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 363
>gi|195379048|ref|XP_002048293.1| GJ11427 [Drosophila virilis]
gi|194155451|gb|EDW70635.1| GJ11427 [Drosophila virilis]
Length = 988
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 256 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDNIVACHEELRQTGEGK 315
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPL 376
YRF T + WLQT + Y +SKPD+V+ TH+ +
Sbjct: 316 SCYYRFLTKGQQYIWLQTDYYVSYHQYSSKPDYVVCTHKVI 356
>gi|417412957|gb|JAA52836.1| Putative aryl-hydrocarbon receptor nuclear translocator, partial
[Desmodus rotundus]
Length = 860
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 270 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 327
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 328 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 386
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 387 RRELGIEESLPETAADKSQDSGSD 410
>gi|344288390|ref|XP_003415933.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Loxodonta africana]
Length = 848
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|407316754|gb|AFU07559.1| hypoxia-inducible factor 1 alpha subunit [Protopterus annectens]
Length = 813
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 209 FKEPPLTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYDPEDLL 268
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D + H +L G YR +GG+ W++T + ++Y KNS+
Sbjct: 269 NHSVYEYYHALDSDNLTKTHHDLFTKGQVTTGQYRMLAKEGGYVWVETQATVIYNTKNSQ 328
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 329 PQCIVCVN 336
>gi|124430743|ref|NP_989505.2| circadian locomoter output cycles protein kaput [Gallus gallus]
gi|5442153|gb|AAD43283.1|AF132531_1 CLOCK [Gallus gallus]
Length = 875
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|6466210|gb|AAF12827.1|AF203107_1 circadian rhythmicity protein CLOCK [Xenopus laevis]
Length = 778
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+A + TP + + F S+H L+ + +D R ++GY E+ GYD
Sbjct: 243 VATVRLATPQFIKEMCTVEESNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYD 302
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVIS 371
H DDL +A H+ L++ G YRF T W WLQT + Y NS+P+F++
Sbjct: 303 YYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTRYYITYHQWNSRPEFIVC 362
Query: 372 TH 373
TH
Sbjct: 363 TH 364
>gi|390364398|ref|XP_003730603.1| PREDICTED: aryl hydrocarbon receptor-like [Strongylocentrotus
purpuratus]
Length = 824
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSL-LEIPHKEVMFKSKHKLDLSLVS 290
++ G +K L R P LFA PF S +I K F + H LDL++ S
Sbjct: 223 KMQCTGTMKSLPDAQRVGHAPHQVLFAAFRPFILLSADTDIESKPGTFWTTHDLDLNVAS 282
Query: 291 MDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGW 350
++ R + G + L Y L+H DDL V H+ L+ T + +R DG W
Sbjct: 283 VENRYCEITGIDSSHLEGKSLYHLIHPDDLLAVYVCHKTLIDTDEVHTMFFRLMRLDGTW 342
Query: 351 QWLQTSSRLVYKNSKPDFVISTHRPLMEEE 380
QWL T V KN + + ++ H P+ EE+
Sbjct: 343 QWLHTRGHAVTKNGRKNSLVFAHSPVREED 372
>gi|410920848|ref|XP_003973895.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Takifugu rubripes]
Length = 855
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 260 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLEILAKCHE 317
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 318 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 364
>gi|321117672|gb|ADW54531.1| hypoxia-inducible factor-1alpha [Cyprinus carpio]
Length = 719
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 177 FKEPPLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 236
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 237 NKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQATVIYNPKNSQ 296
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 297 PQCIVCVN 304
>gi|194209149|ref|XP_001492839.2| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Equus caballus]
gi|338723611|ref|XP_003364760.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Equus caballus]
Length = 846
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|47213557|emb|CAF91831.1| unnamed protein product [Tetraodon nigroviridis]
Length = 832
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P+ E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 254 IEEPNGE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 311
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 312 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 367
>gi|115920139|ref|XP_782984.2| PREDICTED: uncharacterized protein LOC577676 [Strongylocentrotus
purpuratus]
Length = 820
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L AI P SL E+ MF + LD+ L+ +D + +L GY +L Y
Sbjct: 207 VGLVAIGHSLPPSSLTEVKLYNNMFMFRASLDMKLIFLDGKVAVLTGYEPQDLIEKTIYH 266
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G + +RF + GGW W+Q+++ +V+ ++S+P ++S
Sbjct: 267 FVHPMDIMHIRYAHHTLLLKGQATTRYFRFLSKHGGWVWMQSAATIVHNSRSSRPHCIVS 326
Query: 372 THRPLMEEEGRDLL 385
+ L + E ++L+
Sbjct: 327 VNTVLSKMEEKELI 340
>gi|18858445|ref|NP_571032.1| circadian locomoter output cycles protein kaput [Danio rerio]
gi|4680719|gb|AAD27749.1|AF133306_1 transcription factor clock [Danio rerio]
Length = 893
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 260 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 317
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 318 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 364
>gi|157649153|gb|ABV59209.1| hypoxia-inducible factor 1 alpha [Cyprinus carpio]
Length = 774
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 210 FKEPPLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 269
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 270 NKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQATVIYNPKNSQ 329
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 330 PQCIVCVN 337
>gi|113204806|gb|ABI34136.1| CLOCK1a [Oncorhynchus tshawytscha]
Length = 721
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 233 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 290
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 291 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 337
>gi|145881077|gb|ABP97104.1| Clock [Haplochromis burtoni]
Length = 872
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 260 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 317
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 318 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 364
>gi|118572227|sp|Q8QGQ6.2|CLOCK_CHICK RecName: Full=Circadian locomoter output cycles protein kaput
Length = 875
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|288887156|gb|ADC55886.1| hypoxia inducible factor-1alpha [Champsocephalus gunnari]
Length = 666
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +++ G + +EPP+ L IC P PS +E+P F S+H +D+
Sbjct: 191 LHCSGHVRVYDGCTEETPNGHKEPPVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY +L N YD H D ++ H L G YR
Sbjct: 251 FTYCDERITELMGYDPEDLLNRSVYDYYHAMDSDHLTKTHHNLFAKGQVSTGQYRMLAKR 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPL--MEEEGRDLLGKRTMDFK 393
GG+ W++T + ++Y KNS+P ++ + L ++EE L ++ D K
Sbjct: 311 GGFVWVETQATVIYNNKNSQPQCIVCVNFVLSGIQEEKLVLSLEQMEDVK 360
>gi|242005711|ref|XP_002423706.1| single-minded, putative [Pediculus humanus corporis]
gi|212506882|gb|EEB10968.1| single-minded, putative [Pediculus humanus corporis]
Length = 558
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 212 GLVAVGHSLTPSAITEIKLHTNMFMFRASLDLRLIFLDARVSNLTGYEPQDLIEKTLYHY 271
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIST 372
+H D+ ++ +H LL G +RF T DGGW W+Q+ + +V+ ++S+P ++S
Sbjct: 272 IHGCDMLHMRISHHILLFKGQVTTKYFRFLTKDGGWVWMQSYATIVHNTRSSRPHCIVSV 331
Query: 373 HRPLMEEEGRDLL 385
+ L + E +DL+
Sbjct: 332 NYVLSDLEAKDLV 344
>gi|191961770|ref|NP_001122127.1| clock [Xenopus (Silurana) tropicalis]
gi|189441921|gb|AAI67652.1| clock protein [Xenopus (Silurana) tropicalis]
Length = 829
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+A + TP + + F S+H L+ + +D R ++GY E+ GYD
Sbjct: 243 VATVRLATPQFIKEMCTVEESTEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYD 302
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVIS 371
H DDL +A H+ L++ G YRF T W WLQT + Y NS+P+F++
Sbjct: 303 YYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTRYYITYHQWNSRPEFIVC 362
Query: 372 TH 373
TH
Sbjct: 363 TH 364
>gi|209418764|gb|ACI46597.1| clock-1a protein [Haplochromis burtoni]
Length = 864
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 260 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 317
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 318 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 364
>gi|348504866|ref|XP_003439982.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Oreochromis niloticus]
Length = 871
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 260 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 317
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 318 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 364
>gi|148229705|ref|NP_001080449.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Xenopus laevis]
gi|27696866|gb|AAH43769.1| Hif1a-prov protein [Xenopus laevis]
Length = 802
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ + IC P PS +E P F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYEPDELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ AH + G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSVYEYYHALDSDHLTKAHHNMFTKGQVTTGQYRMLAKKGGYVWVETQATVIYNSKNSQP 332
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L E +DL+
Sbjct: 333 QCIVCVNYVLSEVVEKDLI 351
>gi|4903294|gb|AAD32860.1|AF144425_1 CLOCK protein [Gallus gallus]
Length = 853
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|37779200|gb|AAO72733.1| hypoxia-inducible factor 1 alpha [Xenopus laevis]
Length = 489
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ + IC P PS +E P F S+H LD+ D+R L+GY EL
Sbjct: 198 KKPPMKCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYDPDELLG 257
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ AH + G YR GG+ W++T + ++Y KNS+P
Sbjct: 258 RSVYEYYHALDSDHLTKAHHNMFTKGQVTTGQYRMLAKKGGYVWVETQATVIYNSKNSQP 317
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L E +DL+
Sbjct: 318 QCIVCVNYVLSEVVEKDLI 336
>gi|19773562|gb|AAL98708.1|AF246959_1 CLOCK [Gallus gallus]
Length = 853
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|113204808|gb|ABI34137.1| CLOCK1a [Oncorhynchus tshawytscha]
Length = 746
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 258 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 315
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 316 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 362
>gi|348571872|ref|XP_003471719.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Cavia porcellus]
Length = 854
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>gi|82206300|sp|Q6YGZ4.1|CLOCK_TYTAL RecName: Full=Circadian locomoter output cycles protein kaput
gi|37722553|gb|AAO06119.1| CLOCK [Tyto alba]
Length = 851
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|12831205|ref|NP_075578.1| endothelial PAS domain-containing protein 1 [Rattus norvegicus]
gi|32469610|sp|Q9JHS1.1|EPAS1_RAT RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=Hypoxia-inducible factor
2-alpha; Short=HIF-2-alpha; Short=HIF2-alpha
gi|8953577|emb|CAB96612.1| hypoxia inducible factor 2 alpha [Rattus norvegicus]
Length = 874
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELVGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T +VY +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVVYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQT-------- 418
++ + L E E D++ S NS F SD + S ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVVVSMDQTESCSSHTLMAMNSIFDTSDDVALSEKSNYLFTNLK 394
Query: 419 --------LAPSPGSA 426
LAP+PG A
Sbjct: 395 EEPEDLAQLAPTPGDA 410
>gi|158299100|ref|XP_319213.4| AGAP010058-PA [Anopheles gambiae str. PEST]
gi|157014206|gb|EAA14581.4| AGAP010058-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ P + E+ ++ MF + LD+ L+ +D + L GY +L Y
Sbjct: 271 LGLVAVGHSLSPSAATEVKLQQNMFMFRASLDMKLIYLDAKVSQLTGYEPQDLIENTLYQ 330
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ V HQ LL+ G + + YRF T GGW+W+Q+ + +V+ ++S+P ++S
Sbjct: 331 YIHALDVVQVRQTHQTLLQKGQATTMYYRFLTKAGGWRWVQSHATIVHNTRSSRPHCIVS 390
Query: 372 THRPL 376
+ L
Sbjct: 391 VNYVL 395
>gi|449500804|ref|XP_002195620.2| PREDICTED: circadian locomoter output cycles protein kaput
[Taeniopygia guttata]
Length = 900
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 315 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 372
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 373 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 428
>gi|47224749|emb|CAG00343.1| unnamed protein product [Tetraodon nigroviridis]
Length = 593
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 233 LDIRGRIKILHGQNRK----LEEPPLALFAI-CTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G++K+ +G + EPPL + C P PS ++ P F S+H +D+
Sbjct: 116 LHCTGQLKMYNGCPPRGLCGFREPPLTCAVLMCEPIPHPSNIDTPMDSRTFLSRHSMDMK 175
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY+ +L YD H D V +HQ L G + YR +
Sbjct: 176 FTYCDERVTELMGYTPEDLLGRSVYDFYHALDSENVTKSHQNLCTKGQAVTAQYRMLAKN 235
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ W++T ++Y +NS+P ++ + L + E + +
Sbjct: 236 GGYVWVETQGTVIYNSRNSQPQCIVCINYILSDVEEKSTI 275
>gi|302745166|gb|ADL62686.1| clock 1a [Phreatichthys andruzzii]
Length = 884
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 263 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 320
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT + Y NS+P+F++ TH
Sbjct: 321 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTH 367
>gi|288887160|gb|ADC55888.1| hypoxia inducible factor-1alpha [Chaenocephalus aceratus]
Length = 530
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +++ G + +EPP+ L IC P PS +E+P F S+H +D+
Sbjct: 143 LHCSGHVRVYDGCTEETPNGHKEPPVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMK 202
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY +L N YD H D ++ H L G YR
Sbjct: 203 FTYCDERITELMGYDPEDLLNRSVYDYYHAMDSDHLTKTHHNLFAKGQVSTGQYRMLAKR 262
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPL--MEEEGRDLLGKRTMDFK 393
GG+ W++T + ++Y KNS+P ++ + L ++EE L ++ D K
Sbjct: 263 GGFVWVETQATVIYNNKNSQPQCIVCVNFVLSGIQEEKLVLSLEQMEDVK 312
>gi|147900690|ref|NP_001086426.1| hypoxia-inducible factor 1 alpha [Xenopus laevis]
gi|116487674|gb|AAI26006.1| HIF-1a protein [Xenopus laevis]
Length = 800
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ + IC P PS +E P F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMKCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYDPDELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ AH + G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSVYEYYHALDSDHLTKAHHNMFTKGQVTTGQYRMLAKKGGYVWVETQATVIYNSKNSQP 332
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L E +DL+
Sbjct: 333 QCIVCVNYVLSEVVEKDLI 351
>gi|166343757|gb|ABY86629.1| hypoxia-inducible factor 1 alpha [Rana temporaria]
Length = 806
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 233 LDIRGRIKILHGQNRK----LEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +++ G N + ++PP+ + IC P PS +E P F S+H LD+
Sbjct: 189 LHCTGHMRVYDGCNSQNHCGYKKPPMTCMVLICEPIPHPSNIEFPLDSKTFLSRHSLDMK 248
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L GY EL YD H D ++ AH ++ G YR
Sbjct: 249 FSYCDERVTELAGYEPDELLGQSVYDYYHALDSDHLTKAHHDMFTKGQVTTGQYRMLAKK 308
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ W++T + ++Y KNS+P ++ + L + ++L+
Sbjct: 309 GGYVWVETQATVIYNTKNSQPQCIVCVNYVLSDIVEKELI 348
>gi|102621855|gb|ABF71072.1| hypoxia inducible factor 1 alpha [Xenopus laevis]
Length = 800
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ + IC P PS +E P F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMKCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYDPDELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ AH + G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSVYEYYHALDSDHLTKAHHNMFTKGQVTTGQYRMLAKKGGYVWVETQATVIYNSKNSQP 332
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L E +DL+
Sbjct: 333 QCIVCVNYVLSEVVEKDLI 351
>gi|380039560|gb|AFD32324.1| hypoxia-inducible factor 2 alpha B, partial [Aspius aspius]
Length = 472
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 249 LEEPPLALFAI-CTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
EPPL + C P PS ++ P F S+H +D+ + D+R L+GY EL
Sbjct: 157 FSEPPLTCVTLLCAPIPHPSTIDTPLDSKTFMSRHSMDMKFIYCDERISSLIGYRPEELL 216
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
Y+ H D + +HQ L G YR GG+ W++T + ++Y +NS+
Sbjct: 217 GRSMYEFCHALDSESMTKSHQNLCNKGQVVSGQYRMLAKQGGYVWVETQATVIYNNRNSQ 276
Query: 366 PDFVISTHRPLMEEEGRDLL 385
P +I + L E + L+
Sbjct: 277 PQCIICINYVLSSVEEQSLI 296
>gi|126697510|gb|ABO26712.1| hypoxia-inducible factor 1 alpha [Acipenser gueldenstaedtii]
Length = 784
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 250 EEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
E P ++ IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 215 ERPMTSMVLICDPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQPEDLLGR 274
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ H D ++ H +L G + YR GG+ W++T + ++Y KNS+P
Sbjct: 275 SVYEYYHALDSDHLTKTHHDLFAKGQAITGQYRMLAKKGGFVWVETQATVIYNTKNSQPQ 334
Query: 368 FVISTHRPLMEEEGRDLL 385
++ + L G DL+
Sbjct: 335 CIVCVNYVLSGVVGEDLV 352
>gi|407316770|gb|AFU07567.1| hypoxia-inducible factor 2 alpha subunit [Polyodon spathula]
Length = 852
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 249 LEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL + IC P PS +++P F S+H +DL D+R L+GY EL
Sbjct: 209 FKEPPLTCVVMICEPIPHPSNIDMPLDSKTFLSRHTMDLKFTYCDERITELMGYCPEELL 268
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
Y+ H D + +HQ L G + YR GG+ WL+T ++Y +NS+
Sbjct: 269 GRSVYEFYHALDSDSMTKSHQNLCTKGQAVSSQYRMLAKHGGYVWLETQGTVIYNTRNSQ 328
Query: 366 PDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSD-------SDQLTPSH 416
P ++ + L + E ++ ++D S L + NS+F+ S+QL S
Sbjct: 329 PQCIVCVNFVLSDIEENSVIF--SLDQTESLLKPHVLSMNSFFNSGVPVSDTSEQLFTSL 386
Query: 417 Q-------TLAPSPG 424
+ LAP+PG
Sbjct: 387 KEEPEELAQLAPTPG 401
>gi|410900798|ref|XP_003963883.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Takifugu rubripes]
Length = 864
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 49/252 (19%)
Query: 173 ILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENKWKESPPV--------VSPKSYYQSY 224
+ +G + Y S+ I K+ G L +++ G + + + P +S K+ +Y
Sbjct: 101 VTSDGDMIYLSENINKFMG-----LTQVDLTGHSIFDFTHPCDHEEIRENLSLKTTGNAY 155
Query: 225 NENGP---SER---------LDIRGRI--------KILH--GQNR-----------KLEE 251
++ G SER + RGR K+LH GQ + E
Sbjct: 156 DKKGKELSSERDFFMRMKCTVTTRGRTVNLKSAGWKVLHCTGQLKMYNSCPPRGLCSFRE 215
Query: 252 PPLALFAI-CTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG 310
PPL + C P PS ++ P F S+H +D+ D+R L+GY+ +L
Sbjct: 216 PPLTCAVLMCEPIPHPSNIDTPMDTRTFLSRHSMDMKFTYCDERVTELMGYTPEDLLGRS 275
Query: 311 GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDF 368
YD H D V +HQ L G + YR +GG+ W++T ++Y +NS+P
Sbjct: 276 VYDFYHALDSDKVTKSHQNLCTKGQAVTAQYRMLAKNGGFIWVETQGTVIYNSRNSQPQC 335
Query: 369 VISTHRPLMEEE 380
++ + L + E
Sbjct: 336 IVCINYVLSDIE 347
>gi|407316748|gb|AFU07556.1| hypoxia-inducible factor 1 alpha subunit [Acipenser sinensis]
Length = 763
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 250 EEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
E P ++ IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 215 ERPMTSMVLICDPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQPEDLLGR 274
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ H D ++ H +L G + YR GG+ W++T + ++Y KNS+P
Sbjct: 275 SVYEYYHALDSDHLTKTHHDLFAKGQAITGQYRMLAKKGGFVWVETQATVIYNTKNSQPQ 334
Query: 368 FVISTHRPLMEEEGRDLL 385
++ + L G DL+
Sbjct: 335 CIVCVNYVLSGVVGEDLV 352
>gi|147904360|ref|NP_001085564.1| MGC80468 protein [Xenopus laevis]
gi|49115150|gb|AAH72936.1| MGC80468 protein [Xenopus laevis]
Length = 859
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 214 KEPILSCLIMMCQPIQHPSNIDIPLDSKTFLSRHSMDMKFSYCDDRITELIGYHPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ W++T ++Y +NS+P
Sbjct: 274 RSAYEFYHALDSESMTKSHQNLCTKGQVVTGQYRMLAKHGGYLWVETQGTVIYNTRNSQP 333
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMD-----FKVSYLDAGLNNSYFSDS 409
++ + L E E D++ +MD FK ++ NS FS S
Sbjct: 334 QCIVCVNYVLSEIEKNDVVF--SMDQTESLFKPHFMTM---NSIFSSS 376
>gi|126697522|gb|ABO26718.1| hypoxia-inducible factor 1 alpha [Sander lucioperca]
Length = 749
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ L IC P PS +E+P F S+H +D+ D+R L+GY +L N
Sbjct: 213 KEPPVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLN 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLAKKGGFVWVETQATVIYNNKNSQP 332
Query: 367 DFVISTHRPL--MEEEGRDLLGKRTMDFK 393
V+ + L ++EE + L ++ D +
Sbjct: 333 QCVVCVNFVLSGIQEEKQILSLEQIEDVR 361
>gi|395504059|ref|XP_003756377.1| PREDICTED: hypoxia-inducible factor 1-alpha [Sarcophilus harrisii]
Length = 811
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E+P F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTHRPLMEEEGRDL---LGK--------RTMDFKVSYLDAGLNNSYFSDSDQLT-- 413
++ + + DL LG+ T+D K++ L + S DQL
Sbjct: 333 QCIVCVNYVVSGIVQHDLIFSLGQTECMLKPVETVDMKITRLLTKVETEACSLFDQLKKE 392
Query: 414 PSHQT-LAPSPG 424
P T LAP+ G
Sbjct: 393 PDALTLLAPAAG 404
>gi|326672423|ref|XP_695262.5| PREDICTED: endothelial PAS domain-containing protein 1 [Danio
rerio]
Length = 810
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 240 KILHGQNRKLEEPPLALFA-ICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKML 298
+IL G EPPL +C P PS ++ P F S+H +D+ + D+R L
Sbjct: 208 QILCG----FSEPPLTCITMLCAPIPHPSNVDTPLDSKTFMSRHSMDMKFIYCDERVSSL 263
Query: 299 LGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSR 358
+GY EL Y+ H D + +HQ L G YR +GG+ W++T +
Sbjct: 264 IGYRPEELLGRSVYEFCHALDSENMTKSHQNLCNKGQVVSGQYRMLAKNGGYVWVETQAT 323
Query: 359 LVY--KNSKPDFVISTHRPLMEEEGRDLL 385
++Y +NS+P +I + L E + ++
Sbjct: 324 VIYNNRNSQPQCIICINYILSSVEEQSVI 352
>gi|126697518|gb|ABO26716.1| hypoxia-inducible factor 1 alpha [Gymnocephalus cernuus]
Length = 748
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP L IC P PS +E+P F S+H +D+ D+R L+GY +L N
Sbjct: 213 KEPPFPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLN 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQP 332
Query: 367 DFVISTHRPL--MEEEGRDLLGKRTMDFK 393
V+ + L ++EE + L ++ D K
Sbjct: 333 QCVVCVNFVLSGIQEEKQILSLEQIEDVK 361
>gi|325513897|gb|ADZ23997.1| hypoxia-inducible factor 1a [Myxocyprinus asiaticus]
Length = 780
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPP A L IC P PS +E+P F S+H LD+ D+R L+G+ +L
Sbjct: 211 FKEPPQAYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGHEPDDLL 270
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H +L G + YR GG+ W++T + ++Y KNS+
Sbjct: 271 NKSVYEYYHALDSDHLTKTHHDLFAKGQATTGQYRMLAKKGGYVWVETQATVIYNPKNSQ 330
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 331 PQCIVCVN 338
>gi|2117020|dbj|BAA20130.1| mHLF [Mus musculus]
Length = 874
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELIGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSDSDQLTPSHQT------ 418
++ + L E E D++ +MD S L NS F SD + + ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAMNSIFDSSDDVAVTEKSNYLFTK 392
Query: 419 ----------LAPSPGSA 426
LAP+PG A
Sbjct: 393 LKEEPEELAQLAPTPGDA 410
>gi|46048879|ref|NP_990138.1| endothelial PAS domain-containing protein 1 [Gallus gallus]
gi|5051910|gb|AAD38358.1|AF129813_1 endothelial PAS domain protein 1 [Gallus gallus]
Length = 867
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 214 KEPLLTCLIIMCEPIQHPSNIDIPLDSKTFMSRHSMDMKFTYCDDRITELIGYHPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 274 RSAYEFYHALDSENMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQGTVIYNTRNLQP 333
Query: 367 DFVISTHRPLMEEEGRDLL 385
+I + L E E D++
Sbjct: 334 QCIICVNYVLSEIEKNDIV 352
>gi|107051811|gb|ABF83561.1| hypoxia-inducible factor alpha [Metacarcinus magister]
Length = 1047
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L A+ P PS +E P + F SKH LD+ +D K GY+ +L YD+
Sbjct: 213 LVALAIPVPHPSNIEFPLDKQTFVSKHSLDMKFTYVDSNVKEFCGYTSEDLVGRSVYDMH 272
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D + + A++ LL G YRF GG+ WL T + L++ + +KP V+ +
Sbjct: 273 HALDTSLIQDAYKNLLNKGQVETSRYRFLARAGGYVWLVTQATLIHGPRENKPQHVVCLN 332
Query: 374 RPLMEEEGRD 383
+ E E RD
Sbjct: 333 YVVSEIESRD 342
>gi|178057356|ref|NP_034267.3| endothelial PAS domain-containing protein 1 [Mus musculus]
gi|3914285|sp|P97481.2|EPAS1_MOUSE RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=HIF-1-alpha-like factor;
Short=HLF; Short=mHLF; AltName: Full=HIF-related factor;
Short=HRF; AltName: Full=Hypoxia-inducible factor
2-alpha; Short=HIF-2-alpha; Short=HIF2-alpha
Length = 874
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELIGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSDSDQLTPSHQT------ 418
++ + L E E D++ +MD S L NS F SD + + ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAMNSIFDSSDDVAVTEKSNYLFTK 392
Query: 419 ----------LAPSPGSA 426
LAP+PG A
Sbjct: 393 LKEEPEELAQLAPTPGDA 410
>gi|56785779|gb|AAW29027.1| hypoxia-inducible factor 1 alpha, partial [Epinephelus coioides]
Length = 699
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ L IC P PS +E+P F S+H +D+ D+R L+GY +L N
Sbjct: 181 KEPPVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPDDLLN 240
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 241 RSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQP 300
Query: 367 DFVISTHRPL--MEEEGRDLLGKRTMDFK 393
V+ + L ++EE ++T D K
Sbjct: 301 QCVVCVNFVLSGIQEEKMIFSLEQTEDVK 329
>gi|351715378|gb|EHB18297.1| Endothelial PAS domain-containing protein 1, partial
[Heterocephalus glaber]
Length = 862
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 185 LHCTGQVKVYNSCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 244
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY +L Y+ H D + +HQ L G YR
Sbjct: 245 KFTYCDDRITELIGYHPEDLLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 304
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S +
Sbjct: 305 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHVMAM 362
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F SD+ S ++ LAP+PG A
Sbjct: 363 NSIFDSSDERAASEKSNFLFTKLKEEPEELAQLAPTPGDA 402
>gi|34785558|gb|AAH57870.1| Endothelial PAS domain protein 1 [Mus musculus]
gi|74153020|dbj|BAE34506.1| unnamed protein product [Mus musculus]
gi|148706668|gb|EDL38615.1| endothelial PAS domain protein 1 [Mus musculus]
Length = 874
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELIGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSDSDQLTPSHQT------ 418
++ + L E E D++ +MD S L NS F SD + + ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAMNSIFDSSDDVAVTEKSNYLFTK 392
Query: 419 ----------LAPSPGSA 426
LAP+PG A
Sbjct: 393 LKEEPEELAQLAPTPGDA 410
>gi|1805270|gb|AAB41496.1| endothelial PAS domain protein 1 [Mus musculus]
Length = 875
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 216 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELIGYHPEELLG 275
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 276 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 335
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSDSDQLTPSHQT------ 418
++ + L E E D++ +MD S L NS F SD + + ++
Sbjct: 336 QCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAMNSIFDSSDDVAVTEKSNYLFTK 393
Query: 419 ----------LAPSPGSA 426
LAP+PG A
Sbjct: 394 LKEEPEELAQLAPTPGDA 411
>gi|190339127|gb|AAI63244.1| Clock protein [Danio rerio]
Length = 892
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 260 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 317
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
L++ G YRF T W WLQT Y NS+P+F++ TH
Sbjct: 318 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYTTYHQWNSRPEFIVCTH 364
>gi|355686181|gb|AER97972.1| endothelial PAS domain protein 1 [Mustela putorius furo]
Length = 859
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ HG +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 184 LHCTGQVKVYSSCPPHGGLCSYKEPLLSCLILMCEPIQHPSHMDIPLDSKTFLSRHSMDM 243
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 244 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 303
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 304 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 361
Query: 403 NSYFSDSDQLTPSHQT 418
NS F S ++ S ++
Sbjct: 362 NSIFDSSGEVAVSDKS 377
>gi|443726507|gb|ELU13627.1| hypothetical protein CAPTEDRAFT_122174 [Capitella teleta]
Length = 374
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Query: 212 PPV---VSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSL 268
PPV V + Y++ +N+ D ++ G + + L F +
Sbjct: 202 PPVYEMVECRGYFRKWNKAMLFMATDNDDDASLMTG-GQSANQDELCYFCTVQLGSIQVI 260
Query: 269 LEIPHKE---VMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVAS 325
E+ H E F S+H ++ + +D RG ++GY E+ GYD H +DL VA
Sbjct: 261 RELSHVEEGKREFTSRHSMEWKFLFLDHRGPPIIGYQPFEVLGTSGYDYYHPEDLEKVAE 320
Query: 326 AHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVIST 372
H++L+++G YRF T W W+QT + Y +SKP+F++ T
Sbjct: 321 CHEQLMQSGEGTSCFYRFLTKGQQWIWIQTHYYITYHQWSSKPEFIVCT 369
>gi|326915260|ref|XP_003203937.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Meleagris gallopavo]
Length = 944
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 290 KEPLLTCLIIMCEPIQHPSNIDIPLDSKTFMSRHSMDMKFTYCDDRITELIGYHPEELLG 349
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 350 RSAYEFYHALDSENMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQGTVIYNTRNLQP 409
Query: 367 DFVISTHRPLMEEEGRDLL 385
+I + L E E D++
Sbjct: 410 QCIICVNYVLSEIEKNDIV 428
>gi|2895756|gb|AAC12871.1| hypoxia-inducible factor 1 alpha related factor [Mus musculus]
Length = 874
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELIGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSDSDQLTPSHQT------ 418
++ + L E E D++ +MD S L NS F SD + + ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAMNSIFDSSDDVAVTEKSNYLFTK 392
Query: 419 ----------LAPSPGSA 426
LAP+PG A
Sbjct: 393 LKEEPEELAQLAPTPGDA 410
>gi|308197282|gb|ADO17753.1| single-minded protein [Parhyale hawaiensis]
Length = 597
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 196 VGLVAVGHSLPPSAITEIKMHSNMFMFRASLDLRLIFLDARVTDLTGYQPQDLIEKTLYQ 255
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH DL +V AH LL G YRF T +GGW W+Q+ + +V+ ++S P V++
Sbjct: 256 YVHGCDLMHVRGAHTMLLLKGQVTSKYYRFLTQNGGWVWVQSCATIVHNSRSSGPHCVVA 315
Query: 372 THRPLMEEEGRD 383
+ L + E R+
Sbjct: 316 VNYVLSDIEVRN 327
>gi|288887162|gb|ADC55889.1| hypoxia inducible factor-1alpha [Gobionotothen gibberifrons]
Length = 519
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +++ G + +EPP+ L IC P PS +E+P F S+H +D+
Sbjct: 161 LHCSGHVRVYDGCTEETPNEHKEPPVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMK 220
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY L N Y+ H D ++ H +L G YR
Sbjct: 221 FTYCDERITELMGYDPDNLLNRSVYEYYHAMDSDHLTKTHHDLFAKGQVSTGQYRMLAKR 280
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPL--MEEEGRDLLGKRTMDFK 393
GG+ W++T + ++Y KNS+P V+ + L ++EE L ++ D K
Sbjct: 281 GGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLVLSLEQMEDVK 330
>gi|407316750|gb|AFU07557.1| hypoxia-inducible factor 1 alpha subunit [Lepisosteus platostomus]
Length = 803
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 213 KEPPMTYLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQPEDLLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H +L G + YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSVYEYYHALDSDHLTKTHHDLFAKGQATTGQYRMLAKKGGFVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|6715306|gb|AAF26365.1|AF201076_1 bHLH/PAS transcription factor Clock [Gallus gallus]
Length = 852
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 253 PLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGY 312
PL + +CT +E P++E F S+H L+ + +D R ++GY E+ GY
Sbjct: 260 PLFVKEMCT-------VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGY 310
Query: 313 DLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVI 370
D H DDL +A H+ L++ G YR T W WLQT + Y NS+P+F++
Sbjct: 311 DYYHVDDLDNLAKCHEHLMQYGKGKSCYYRSLTKGQQWIWLQTHYYITYHQWNSRPEFIV 370
Query: 371 STHRPLMEEEGR 382
TH + E R
Sbjct: 371 CTHTVVSYAEVR 382
>gi|83778886|gb|ABC47310.1| hypoxia-inducible factor 1 alpha [Oryzias melastigma]
Length = 748
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ L IC P PS +E+P F S+H +D+ D+R L+GY +L N
Sbjct: 213 KEPPVPYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLN 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHNLFAKGQVCTGRYRMLAKSGGFVWVETQATVIYNNKNSQP 332
Query: 367 DFVISTH 373
V+ +
Sbjct: 333 QCVVCVN 339
>gi|296240119|gb|ADH01741.1| hypoxia-inducible factor 1 alpha [Callionymus valenciennei]
Length = 703
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L IC P PS +E+P F S+H +D+ D+R L+GY EL N Y+
Sbjct: 211 LVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPDELLNRSVYEYY 270
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D ++ H L G YR GG+ W++T + ++Y KNS+P V+ +
Sbjct: 271 HALDSNHLTKTHHNLFAKGQVITGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVN 330
Query: 374 RPL--MEEEGRDLLGKRTMDFK 393
L ++EE L ++T D K
Sbjct: 331 FVLSGVQEEQTILSLEQTQDVK 352
>gi|407316782|gb|AFU07573.1| hypoxia-inducible factor 3 alpha subunit [Gymnocypris namensis]
Length = 594
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 6/157 (3%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFA--ICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVS 290
L G ++ G EPP F +C P PS +E P F ++HK+DLS
Sbjct: 190 LHCTGHMQTFSGDGEN--EPPAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHKMDLSFTQ 247
Query: 291 MDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGW 350
D R L+GY +L Y+ H D +V + Q L G YRF +GG+
Sbjct: 248 CDGRVTELVGYQPDDLIGRSAYEFYHALDFDHVTRSLQILFSKGQVCTSHYRFLAKNGGF 307
Query: 351 QWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
W +T + ++Y K S+P+ V+ + L E D++
Sbjct: 308 MWTETQATVLYNSKTSQPEAVVCLNFILSGVEEADVV 344
>gi|449278511|gb|EMC86333.1| Hypoxia-inducible factor 1 alpha, partial [Columba livia]
Length = 801
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 18/193 (9%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E+P F S+H LD+ D+R L+GY EL
Sbjct: 203 KKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 262
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 263 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQP 322
Query: 367 DFVISTHRPLMEEEGRDL---LGKRTM--------DFKVSYL----DAGLNNSYFSDSDQ 411
++ + L +DL LG+ D K++ + D NS F Q
Sbjct: 323 QCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQ 382
Query: 412 LTPSHQTLAPSPG 424
+ LAP+ G
Sbjct: 383 EPDALTVLAPAAG 395
>gi|407316784|gb|AFU07574.1| hypoxia-inducible factor 3 alpha subunit [Polyodon spathula]
Length = 532
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L +C P PS ++ P +F S+H +DL V D+R LLGYS +L
Sbjct: 201 EPPLTCLTVLCEPIPNPSHIDFPLDRSVFLSRHSMDLHFVQCDERVTELLGYSPEDLIGH 260
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ H D +V + Q LL G YRF GG+ W +T + ++Y K++ P+
Sbjct: 261 SAYEYYHALDTDHVTKSLQILLSKGQVCTGHYRFLVKHGGFVWAETQATVLYSSKSTLPE 320
Query: 368 FVI 370
V+
Sbjct: 321 AVV 323
>gi|348501488|ref|XP_003438301.1| PREDICTED: endothelial PAS domain-containing protein 1 [Oreochromis
niloticus]
Length = 879
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 249 LEEPPLALFAI-CTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL + C P PS ++ P F S+H +D+ D+R L+GY+ +L
Sbjct: 215 FKEPPLTCAVLMCEPIPHPSNIDTPLDSKTFLSRHSMDMKFTYCDERVTELMGYTPEDLL 274
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
YD H D V +HQ L G + YR +GG+ W++T ++Y +NS+
Sbjct: 275 GRSIYDFYHALDSDSVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETQGTVIYNSRNSQ 334
Query: 366 PDFVISTHRPLMEEEGRDLL 385
P ++ + L + E + ++
Sbjct: 335 PQCIVCINYVLSDIEEKSMI 354
>gi|71911739|gb|AAZ52832.1| hypoxia inducible factor 1 alpha [Zoarces viviparus]
Length = 747
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ L +C P PS +E+P F S+H +D+ D+R L+GY +L N
Sbjct: 211 QEPPVPYLVLVCDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLN 270
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 271 RSVYEYYHALDSDHLTKTHHNLFTKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQP 330
Query: 367 DFVISTHRPL--MEEEGRDLLGKRTMDFK 393
V+ + L ++EE L ++ D K
Sbjct: 331 QCVVCVNFVLSGIQEEKLILSLEQIEDVK 359
>gi|395508094|ref|XP_003758350.1| PREDICTED: endothelial PAS domain-containing protein 1 [Sarcophilus
harrisii]
Length = 862
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 214 KEPLLTCLIIMCEPIQHPSTMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 274 RSAYEFYHALDSESMTKSHQNLCTKGQVISGQYRMLAKHGGYVWLETQGTVIYNTRNLQP 333
Query: 367 DFVISTHRPLMEEEGRDLL 385
+I + L E E D++
Sbjct: 334 QCIICVNYVLSEIEKNDVV 352
>gi|45602851|gb|AAR95697.2| hypoxia-inducible factor-1alpha [Ctenopharyngodon idella]
Length = 774
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 210 FKEPPLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 269
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ H L G + Y GG+ W++T + ++Y KNS+
Sbjct: 270 NRSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYHMMAKKGGFVWVETQATVIYNPKNSQ 329
Query: 366 PDFVISTH 373
P ++ +
Sbjct: 330 PQCIVCVN 337
>gi|307198404|gb|EFN79346.1| Single-minded-like protein 1 [Harpegnathos saltator]
Length = 774
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ S+ EI + MF + LDL L+ +D R L GY +L Y
Sbjct: 305 VGLLAVGHSLPTSSITEIKLHQNMFMFRASLDLKLIFLDARVAHLTGYDPPDLIEKTLYH 364
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH+ LL G YRF T +GGW W+Q+ +V+ ++S+P ++S
Sbjct: 365 YVHAADVVHLRQAHRLLLCKGQVTTRYYRFLTKNGGWVWMQSYVTIVHNSRSSRPHCIVS 424
Query: 372 THRPLMEEEGRDLL 385
+ L E L+
Sbjct: 425 VNYVLTAAENAGLI 438
>gi|227437411|gb|ACP30468.1| PAS domain protein 1 variant [Murina leucogaster]
Length = 521
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKS 280
++S N S G I+ H + + +A + TP + + F S
Sbjct: 219 FKSLNSVSTSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTS 278
Query: 281 KHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIA 340
+H L+ + +D R ++GY E+ GYD H DDL + H+ L++ G
Sbjct: 279 RHSLEWKFLFLDHRAPTIIGYLPFEVLGTSGYDYYHVDDLK-IGKCHEHLMQYGKGKSCY 337
Query: 341 YRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 338 YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 381
>gi|223648522|gb|ACN11019.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 802
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP++ L +C P PS +E P F S+H LD+ D+R L+GY +L N
Sbjct: 261 KEPPVSYLVLVCDPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERITELMGYDPEDLLN 320
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 321 RSVYEYYHALDSDHLIKTHHNLFVKGQVSTGQYRMLAKIGGFVWVETQATVIYNNKNSQP 380
Query: 367 DFVISTHRPLMEEEGRDLLG-KRTMDFK 393
V+S + L E + +L ++T D +
Sbjct: 381 QCVVSVNFVLSGIEEKMVLSLEQTEDMR 408
>gi|449270823|gb|EMC81472.1| Endothelial PAS domain-containing protein 1 [Columba livia]
Length = 874
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 216 KEPLLTCLIIMCEPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLG 275
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 276 RSAYEFYHALDSESMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQGTVIYNTRNLQP 335
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L E E D++
Sbjct: 336 QCIVCVNYVLSEIEKNDIV 354
>gi|407316760|gb|AFU07562.1| hypoxia-inducible factor 2 alpha subunit [Polypterus senegalus]
Length = 848
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 249 LEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL + IC P P ++IP + S+H +D+ D+R L+GYS EL
Sbjct: 211 FKEPPLNCVIMICEPIPHPINIDIPLDSKTYLSRHSMDMKFTYCDERITELMGYSPEELL 270
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
YD H D + +H L G + YR GG+ W++T ++Y +NS+
Sbjct: 271 GRSIYDFYHALDSDSLTKSHHNLCTKGQAVSGQYRMLAKHGGYVWIETQGTVIYNSRNSQ 330
Query: 366 PDFVISTHRPLMEEEGRDLL 385
P ++ + L E E ++
Sbjct: 331 PQCIVCINYVLSEIEEDSII 350
>gi|124054321|gb|ABM89374.1| EPAS1 [Pongo pygmaeus]
Length = 259
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L L +C P PS ++IP F S+H +D+
Sbjct: 36 LHCTGQVKVYNNCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 95
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 96 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 155
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 156 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 213
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 214 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 253
>gi|71911731|gb|AAZ52828.1| hypoxia inducible factor 1 alpha [Pachycara brachycephalum]
Length = 747
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ L +C P PS +E+P F S+H +D+ D+R L+GY +L N
Sbjct: 211 QEPPVPYLVLVCDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLN 270
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 271 RSVYEYYHALDSDHLTKTHHNLFTKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQP 330
Query: 367 DFVI 370
V+
Sbjct: 331 QCVV 334
>gi|318217867|ref|NP_001187163.1| HIF 2 alpha [Ictalurus punctatus]
gi|116829910|gb|ABK27926.1| HIF 2 alpha [Ictalurus punctatus]
Length = 816
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 233 LDIRGRIKILHGQNRKL-----EEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +K+ +G + + E P + +C P PS ++ P F S+H +D+
Sbjct: 189 LHCTGHLKVYNGCSTRTPCGYKESPLTCVVMLCEPVPHPSNIDTPFDSKTFLSRHSMDMK 248
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY+ +L Y+ H D V +HQ L G + YR
Sbjct: 249 FTYCDERVTQLMGYNPEDLLGRSVYEFYHALDSESVTRSHQNLCTKGQAVSGHYRMLAKH 308
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSY 405
GG+ W++T ++Y +NS+P ++ + L + E + + + D S L + +S+
Sbjct: 309 GGFVWVETQGTVIYSSRNSQPQCIVCVNYVLSDIEEKSTIFSK--DQTESLLKTNM-SSF 365
Query: 406 FSDS 409
FS +
Sbjct: 366 FSKA 369
>gi|449496328|ref|XP_002194260.2| PREDICTED: endothelial PAS domain-containing protein 1 [Taeniopygia
guttata]
Length = 878
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 21/196 (10%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 241 KEPLLTCLIIMCEPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLG 300
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 301 RSAYEFYHALDSESMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQGTVIYNTRNLQP 360
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMD-----FKVSYL------DAGL-----NNSYFSDSD 410
++ + L E E D++ +MD FK L D+G+ ++ F+
Sbjct: 361 QCIVCVNYVLSEIEKNDVV--FSMDQTESLFKPHLLTMNTAYDSGIPVTEKSDFLFTKLK 418
Query: 411 QLTPSHQTLAPSPGSA 426
+ LAP+PG A
Sbjct: 419 EEPEELAQLAPTPGDA 434
>gi|449504557|ref|XP_002200394.2| PREDICTED: hypoxia-inducible factor 1-alpha [Taeniopygia guttata]
Length = 825
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 18/193 (9%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E+P F S+H LD+ D+R L+GY EL
Sbjct: 227 KKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 286
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 287 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQP 346
Query: 367 DFVISTHRPLMEEEGRDL---LGKRTM--------DFKVSYL----DAGLNNSYFSDSDQ 411
++ + L +DL LG+ D K++ + D NS F Q
Sbjct: 347 QCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQ 406
Query: 412 LTPSHQTLAPSPG 424
+ LAP+ G
Sbjct: 407 EPDALTVLAPAAG 419
>gi|395510737|ref|XP_003759627.1| PREDICTED: aryl hydrocarbon receptor repressor [Sarcophilus
harrisii]
Length = 645
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 21/153 (13%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
+ +G++K L GQ +K L P L+LF + P PS+ E+ K V+ ++K K D++
Sbjct: 144 MQFQGKLKFLFGQKKKTPSGTLLPPQLSLFCVVVPILLPSVTEMKMKNVLLRAKQKADVA 203
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
S D + K G ++E HY Q + G +G+ ++ Q ND
Sbjct: 204 -ASTDAKAKATAGLCESEPQGR-----THY----------QGVKNNGENGVSMFKVQAND 247
Query: 348 GGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEE 380
W W+Q +++L+Y++S D+++++ EEE
Sbjct: 248 DHWVWVQANAQLLYRSSCSDYLLNSQTVAREEE 280
>gi|6644408|gb|AAF21052.1|AF212989_1 hypoxia-inducible factor 2 alpha [Coturnix coturnix]
Length = 870
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 214 KEPLLTCLIIMCEPIQHPSNIDIPLDSKTFMSRHSMDMKFTYCDDRITELIGYHPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 274 RSVYEFYHALDSENMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQGTVIYNTRNLQP 333
Query: 367 DFVISTHRPLMEEEGRDLL 385
+I + L E E D++
Sbjct: 334 QCIICVNYVLSEIEKNDVV 352
>gi|407316758|gb|AFU07561.1| hypoxia-inducible factor 1 alpha subunit [Schizothorax prenanti]
Length = 770
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 210 FKEPPLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDDLL 269
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+
Sbjct: 270 KRSVYEYYHALDSDHLNKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQATVIYNPKNSQ 329
Query: 366 PDFVISTH 373
P V+ +
Sbjct: 330 PQCVVCVN 337
>gi|288887164|gb|ADC55890.1| hypoxia inducible factor-1alpha [Pseudochaenichthys georgianus]
Length = 686
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +++ G + +EPP+ L C P PS +E+P F S+H +D+
Sbjct: 192 LHCSGHVRVYDGCTEETPNGHKEPPVPYLVLXCDPIQHPSNIEVPLDTKTFLSRHTMDMK 251
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY +L N YD H D ++ H L G YR
Sbjct: 252 FTYCDERITELMGYDPEDLLNRSVYDYYHAMDSDHLTKTHHNLFAKGQVSTGQYRMLAKR 311
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPL--MEEEGRDLLGKRTMDFK 393
GG+ W++T + ++Y KNS+P ++ + L ++EE L ++ D K
Sbjct: 312 GGFVWVETQATVIYNNKNSQPQCIVCVNFVLSDIQEEKLVLSLEQMEDVK 361
>gi|194384556|dbj|BAG59438.1| unnamed protein product [Homo sapiens]
Length = 669
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 147 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 206
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 207 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 266
Query: 367 DFVI 370
++
Sbjct: 267 QCIV 270
>gi|327280975|ref|XP_003225226.1| PREDICTED: endothelial PAS domain-containing protein 1-like [Anolis
carolinensis]
Length = 871
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 82/194 (42%), Gaps = 17/194 (8%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS +IP F S+H +D+ D R L+GY EL
Sbjct: 214 KEPLLSCLVLMCEPIQHPSNTDIPLDSKTFLSRHSMDMKFTYCDDRITELVGYHPDELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 274 RSAYEFYHALDSENMTKSHQNLCAKGQVVTGQYRMLAKHGGYVWLETQGTVIYNTRNLQP 333
Query: 367 DFVISTHRPLMEEEGRDL---------LGKRTMDFKVSYLDAGL-----NNSYFSDSDQL 412
+I + L E E D+ L K M S D G+ ++ F+ +
Sbjct: 334 QCIICVNYVLSEIENNDIVFSMDQTESLFKPRMMAMNSVYDNGIPVTDKSDFLFTKLKEE 393
Query: 413 TPSHQTLAPSPGSA 426
LAP+PG A
Sbjct: 394 PEELAQLAPTPGDA 407
>gi|417405041|gb|JAA49246.1| Putative transcriptional regulator sim1 [Desmodus rotundus]
Length = 870
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELVGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 275 RSAYEFYHALDSESMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSDSDQLTPSHQT 418
++ + L E E D++ +MD S L NS F +S ++ S ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAMNSIFDNSGEVAVSEKS 386
>gi|410954769|ref|XP_003984034.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1 [Felis catus]
Length = 907
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 233 LHCTGQVKVYNSCPPHSSLCSFKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 292
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 293 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 352
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ WL+T ++Y +N +P ++ + L E E D++
Sbjct: 353 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV 393
>gi|391325150|ref|XP_003737102.1| PREDICTED: single-minded homolog 1-like [Metaseiulus occidentalis]
Length = 496
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ P ++ EI MF + LDL L+ +D R L GY EL + Y
Sbjct: 213 LGLVAVGHSLPPSAVTEIKMHTNMFMFRASLDLKLIFLDSRVSALTGYEPQELIDKSLYQ 272
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH +LL G YR GG+ W+Q+ + +V+ ++S+P V+S
Sbjct: 273 FVHVSDCMHLRLAHHQLLLKGQVTTKYYRLLCKGGGYVWMQSYATIVHNSRSSRPHCVVS 332
Query: 372 THRPLMEEEGRDL 384
+ L + RD+
Sbjct: 333 VNYVLSDIHERDI 345
>gi|334312813|ref|XP_001382184.2| PREDICTED: endothelial PAS domain-containing protein 1 [Monodelphis
domestica]
Length = 1354
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 706 KEPLLTCLIVMCEPIQHPSTMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLG 765
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 766 RSAYEFYHALDSESMTKSHQNLCTKGQVISGQYRMLAKHGGYVWLETQGTVIYNTRNLQP 825
Query: 367 DFVISTHRPLMEEEGRDLL 385
+I + L E E D++
Sbjct: 826 QCIICVNYVLSEIEKNDVV 844
>gi|296223954|ref|XP_002757844.1| PREDICTED: endothelial PAS domain-containing protein 1 [Callithrix
jacchus]
Length = 867
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLIAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|1805268|gb|AAB41495.1| endothelial PAS domain protein 1 [Homo sapiens]
Length = 870
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|297667706|ref|XP_002812111.1| PREDICTED: endothelial PAS domain-containing protein 1 [Pongo
abelii]
Length = 869
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|27807411|ref|NP_777150.1| endothelial PAS domain-containing protein 1 [Bos taurus]
gi|5019614|dbj|BAA78676.1| endothelial PAS domain protein 1/hypoxia-inducible factor-2 alpha
[Bos taurus]
Length = 870
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHSSLCGCKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLLTM 370
Query: 403 NSYFSDSDQLTPSHQT 418
NS F +S ++ S ++
Sbjct: 371 NSIFDNSGKVAVSEKS 386
>gi|116248098|sp|Q0PGG7.1|HIF1A_BOSMU RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|111143453|gb|ABH06558.1| hypoxia inducible factor isoform 1a [Bos grunniens]
Length = 823
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKKGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|440910232|gb|ELR60049.1| Hypoxia-inducible factor 1-alpha, partial [Bos grunniens mutus]
Length = 814
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 204 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 263
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 264 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 323
Query: 367 DFVISTH 373
++ +
Sbjct: 324 QCIVCVN 330
>gi|380810424|gb|AFE77087.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
Length = 869
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|62822155|gb|AAY14704.1| unknown [Homo sapiens]
Length = 861
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 184 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 243
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 244 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 303
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 304 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 361
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 362 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 401
>gi|114577233|ref|XP_001147219.1| PREDICTED: endothelial PAS domain-containing protein 1 isoform 4
[Pan troglodytes]
gi|410265254|gb|JAA20593.1| endothelial PAS domain protein 1 [Pan troglodytes]
gi|410350683|gb|JAA41945.1| endothelial PAS domain protein 1 [Pan troglodytes]
Length = 870
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|355565669|gb|EHH22098.1| hypothetical protein EGK_05296 [Macaca mulatta]
gi|355751289|gb|EHH55544.1| hypothetical protein EGM_04774 [Macaca fascicularis]
gi|384945768|gb|AFI36489.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
gi|384945770|gb|AFI36490.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
Length = 869
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|319402133|ref|NP_001188316.1| aryl hydrocarbon receptor repressor [Gallus gallus]
gi|312165964|gb|ADQ38959.1| aryl hydrocarbon receptor repressor [Gallus gallus]
Length = 756
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
+ +G++K L GQ +K P L+LF I P PS+ E+ K ++ K+KHK D +
Sbjct: 234 MQFQGKLKFLFGQRKKSSSGAVLPPQLSLFCIVVPLLLPSVTEMKMKSLLVKAKHKADDA 293
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVH----YDDLAYVASAHQELLKTGASGMIAYRF 343
V+ + K G E A + G + H + ++ + + G +G+ +
Sbjct: 294 AVNTNSSTKSNSGL--CEAAELYGRNCHHEGAAFANVLQITENQFKAKNNGENGISLVKV 351
Query: 344 QTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEE 380
QTN+ W W+Q +++L+Y++ ++V++ + L EE+
Sbjct: 352 QTNEDHWVWVQANTQLLYRSGCSEYVVAQQQMLKEED 388
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSYLLERSF 629
++D++HQ++Y+ +H +DR++ RQL W + PP+ +G LQ +E Y+L + F
Sbjct: 145 QTDVMHQNIYDYIHVDDRQDFCRQLHW-AMNPPQMSGQQLQTETGEE--YILSKLF 197
>gi|349604849|gb|AEQ00283.1| Hypoxia-inducible factor 1 alpha-like protein, partial [Equus
caballus]
Length = 667
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 107 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 166
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 167 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 226
Query: 367 DFVISTH 373
++ +
Sbjct: 227 QCIVCVN 233
>gi|397504232|ref|XP_003822706.1| PREDICTED: endothelial PAS domain-containing protein 1 [Pan
paniscus]
Length = 870
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|297265931|ref|XP_001112947.2| PREDICTED: endothelial PAS domain-containing protein 1 isoform 3
[Macaca mulatta]
Length = 832
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 156 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 215
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 216 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 275
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 276 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 333
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 334 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 373
>gi|348573541|ref|XP_003472549.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Cavia porcellus]
Length = 873
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 258 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 317
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 318 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 377
Query: 367 DFVISTH 373
++ +
Sbjct: 378 QCIVCVN 384
>gi|432096666|gb|ELK27249.1| Hypoxia-inducible factor 1-alpha [Myotis davidii]
Length = 840
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 154 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 213
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 214 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 273
Query: 367 DFVISTH 373
++ +
Sbjct: 274 QCIVCVN 280
>gi|40254439|ref|NP_001421.2| endothelial PAS domain-containing protein 1 [Homo sapiens]
gi|32470617|sp|Q99814.3|EPAS1_HUMAN RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP2; AltName: Full=Class E basic
helix-loop-helix protein 73; Short=bHLHe73; AltName:
Full=HIF-1-alpha-like factor; Short=HLF; AltName:
Full=Hypoxia-inducible factor 2-alpha;
Short=HIF-2-alpha; Short=HIF2-alpha; AltName:
Full=Member of PAS protein 2; AltName: Full=PAS
domain-containing protein 2
gi|30410995|gb|AAH51338.1| Endothelial PAS domain protein 1 [Homo sapiens]
gi|119620660|gb|EAX00255.1| endothelial PAS domain protein 1 [Homo sapiens]
gi|168277630|dbj|BAG10793.1| endothelial PAS domain-containing protein 1 [synthetic construct]
Length = 870
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|426233494|ref|XP_004010752.1| PREDICTED: hypoxia-inducible factor 1-alpha [Ovis aries]
Length = 764
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 154 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 213
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 214 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 273
Query: 367 DFVISTH 373
++ +
Sbjct: 274 QCIVCVN 280
>gi|405962835|gb|EKC28478.1| Circadian locomoter output cycles protein kaput [Crassostrea gigas]
Length = 466
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GY+ H DDL +A +H++L++TG
Sbjct: 267 FTSRHSLEWKFLFLDHRASPIIGYLPFEVLGTSGYEYYHPDDLDQIAKSHEQLMQTGEGT 326
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W W++T + Y NSKP+F++ T+
Sbjct: 327 SSYYRFLTKGQQWIWIKTRYYITYHQWNSKPEFIVCTN 364
>gi|332227348|ref|XP_003262854.1| PREDICTED: endothelial PAS domain-containing protein 1 [Nomascus
leucogenys]
Length = 877
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 201 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 260
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 261 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVISGQYRMLAK 320
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 321 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 378
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 379 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 418
>gi|281352631|gb|EFB28215.1| hypothetical protein PANDA_000205 [Ailuropoda melanoleuca]
Length = 860
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 185 LHCTGQVKVYNNCPPHSGLCSYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 244
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 245 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 304
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 305 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 362
Query: 403 NSYFSDSDQLTPSHQT 418
NS F S ++ S ++
Sbjct: 363 NSIFDSSGEVAASDKS 378
>gi|1695801|gb|AAC51212.1| MOP2 [Homo sapiens]
Length = 870
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|332237270|ref|XP_003267828.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Nomascus
leucogenys]
Length = 735
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|326921175|ref|XP_003206838.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Meleagris
gallopavo]
Length = 837
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G I++ N + ++PP+ L IC P PS +E+P F S+H LD+
Sbjct: 218 LHCTGHIRVYDTCNNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMK 277
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY EL Y+ H D ++ H ++ G YR
Sbjct: 278 FSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQ 337
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ W++T + ++Y KNS+P ++ + L +DL+
Sbjct: 338 GGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLI 377
>gi|111143456|gb|ABH06559.1| hypoxia inducible factor isoform 1b [Bos grunniens]
Length = 823
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|297298011|ref|XP_002805105.1| PREDICTED: hypoxia-inducible factor 1-alpha [Macaca mulatta]
Length = 769
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 156 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 215
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 216 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 275
Query: 367 DFVISTH 373
++ +
Sbjct: 276 QCIVCVN 282
>gi|117935055|ref|NP_776764.2| hypoxia-inducible factor 1-alpha [Bos taurus]
gi|47933909|gb|AAT39520.1| hypoxia inducible factor-1a [Bos grunniens]
gi|117306677|gb|AAI26623.1| Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Bos taurus]
gi|296482937|tpg|DAA25052.1| TPA: hypoxia-inducible factor 1-alpha [Bos taurus]
Length = 823
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|45383550|ref|NP_989628.1| hypoxia-inducible factor 1-alpha [Gallus gallus]
gi|32469796|sp|Q9YIB9.2|HIF1A_CHICK RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|7594825|dbj|BAA34234.2| hypoxia-inducible factor-1 alpha [Gallus gallus]
Length = 811
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G I++ N + ++PP+ L IC P PS +E+P F S+H LD+
Sbjct: 192 LHCTGHIRVYDTCNNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMK 251
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY EL Y+ H D ++ H ++ G YR
Sbjct: 252 FSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQ 311
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ W++T + ++Y KNS+P ++ + L +DL+
Sbjct: 312 GGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLI 351
>gi|32469795|sp|Q9XTA5.1|HIF1A_BOVIN RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|5019612|dbj|BAA78675.1| hypoxia-inducible factor-1 alpha [Bos taurus]
Length = 823
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|109083876|ref|XP_001098939.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 5 [Macaca
mulatta]
gi|402876373|ref|XP_003901946.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Papio
anubis]
gi|383409709|gb|AFH28068.1| hypoxia-inducible factor 1-alpha isoform 2 [Macaca mulatta]
Length = 735
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|361095159|gb|AEW10558.1| HIF-1 alpha [Capra hircus]
Length = 823
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|296215222|ref|XP_002754036.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Callithrix
jacchus]
Length = 735
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|194385580|dbj|BAG65167.1| unnamed protein product [Homo sapiens]
Length = 769
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 156 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 215
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 216 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 275
Query: 367 DFVISTH 373
++ +
Sbjct: 276 QCIVCVN 282
>gi|114653413|ref|XP_001168948.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 9 [Pan
troglodytes]
gi|410226738|gb|JAA10588.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410297972|gb|JAA27586.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410344151|gb|JAA40617.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
Length = 735
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|185134444|ref|NP_001117760.1| hypoxia-inducible factor 1-alpha [Oncorhynchus mykiss]
gi|32469773|sp|Q98SW2.1|HIF1A_ONCMY RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|13561506|gb|AAK30364.1|AF304864_1 hypoxia-inducible factor 1 alpha [Oncorhynchus mykiss]
Length = 766
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F S+H LD+ D+R L+GY +L N Y+
Sbjct: 222 LVLVCDPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERITELMGYDPEDLLNRSVYEYY 281
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D ++ H L G YR GG+ W++T + ++Y KNS+P V+ +
Sbjct: 282 HALDSDHLMKTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVN 341
Query: 374 RPL--MEEEGRDLLGKRTMDFK 393
L +EEE L ++T D +
Sbjct: 342 YVLSGIEEEKMMLSLEQTEDMR 363
>gi|62632235|gb|AAX89137.1| hypoxia inducible factor-1 alpha [Pantholops hodgsonii]
Length = 823
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|403264369|ref|XP_003924458.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Saimiri
boliviensis boliviensis]
Length = 735
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|332237272|ref|XP_003267829.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Nomascus
leucogenys]
Length = 850
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 237 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 296
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 297 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 356
Query: 367 DFVISTH 373
++ +
Sbjct: 357 QCIVCVN 363
>gi|31077211|ref|NP_851397.1| hypoxia-inducible factor 1-alpha isoform 2 [Homo sapiens]
gi|397523305|ref|XP_003831676.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Pan
paniscus]
gi|16326344|dbj|BAB70608.1| hypoxia-inducible factor 1 alpha variant [Homo sapiens]
gi|119601215|gb|EAW80809.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_c [Homo sapiens]
Length = 735
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|355693338|gb|EHH27941.1| hypothetical protein EGK_18259, partial [Macaca mulatta]
Length = 816
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 203 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 262
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 263 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 322
Query: 367 DFVISTH 373
++ +
Sbjct: 323 QCIVCVN 329
>gi|343055703|gb|AEL79603.1| hypoxia-inducible factor 1 alpha subunit [Pantholops hodgsonii]
Length = 823
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|301753236|ref|XP_002912483.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Ailuropoda melanoleuca]
Length = 1022
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 347 LHCTGQVKVYNNCPPHSGLCSYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 406
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 407 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 466
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 467 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 524
Query: 403 NSYFSDSDQLTPSHQT 418
NS F S ++ S ++
Sbjct: 525 NSIFDSSGEVAASDKS 540
>gi|395843416|ref|XP_003794481.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Otolemur
garnettii]
Length = 736
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|351713876|gb|EHB16795.1| Hypoxia-inducible factor 1 alpha [Heterocephalus glaber]
Length = 832
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 217 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 276
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 277 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 336
Query: 367 DFVISTH 373
++ +
Sbjct: 337 QCIVCVN 343
>gi|344254779|gb|EGW10883.1| Hypoxia-inducible factor 1 alpha [Cricetulus griseus]
Length = 820
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 201 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 260
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 261 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 320
Query: 367 DFVISTH 373
++ +
Sbjct: 321 QCIVCVN 327
>gi|121484012|gb|ABM54325.1| HIF1A [Pan paniscus]
Length = 583
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 201 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 260
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 261 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 320
Query: 367 DFVISTH 373
++ +
Sbjct: 321 QCIVCVN 327
>gi|354492579|ref|XP_003508425.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Cricetulus
griseus]
Length = 818
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 201 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 260
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 261 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 320
Query: 367 DFVISTH 373
++ +
Sbjct: 321 QCIVCVN 327
>gi|359320073|ref|XP_003639250.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Canis lupus
familiaris]
Length = 732
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|26345338|dbj|BAC36320.1| unnamed protein product [Mus musculus]
Length = 736
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 113 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 172
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 173 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 232
Query: 367 DFVISTH 373
++ +
Sbjct: 233 QCIVCVN 239
>gi|197098558|ref|NP_001126975.1| hypoxia-inducible factor 1-alpha [Pongo abelii]
gi|55733347|emb|CAH93355.1| hypothetical protein [Pongo abelii]
Length = 827
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVISTH 373
++ +
Sbjct: 334 QCIVCVN 340
>gi|355778653|gb|EHH63689.1| hypothetical protein EGM_16704 [Macaca fascicularis]
Length = 827
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVISTH 373
++ +
Sbjct: 334 QCIVCVN 340
>gi|148228022|ref|NP_001090889.1| endothelial PAS domain-containing protein 1 [Sus scrofa]
gi|125634700|gb|ABN48508.1| hypoxia-inducible factor 2 alpha [Sus scrofa]
Length = 871
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHSSLCGCKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ WL+T ++Y +N +P ++ + L E E D++
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV 353
>gi|431904459|gb|ELK09842.1| Hypoxia-inducible factor 1 alpha, partial [Pteropus alecto]
Length = 873
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 202 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 261
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 262 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 321
Query: 367 DFVISTH 373
++ +
Sbjct: 322 QCIVCVN 328
>gi|354503088|ref|XP_003513613.1| PREDICTED: endothelial PAS domain-containing protein 1 [Cricetulus
griseus]
gi|344258028|gb|EGW14132.1| Endothelial PAS domain-containing protein 1 [Cricetulus griseus]
Length = 878
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 23/198 (11%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 219 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRIMELIGYHPEELLG 278
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 279 RSAYEFYHALDSESMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 338
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLD---AGLNNSYFSDSDQLTPSHQT----- 418
++ + L E E D++ +MD S +NN + S D
Sbjct: 339 QCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLVAMNNIFDSSGDAAVSEKSNYLFTK 396
Query: 419 ----------LAPSPGSA 426
LAP+PG A
Sbjct: 397 LKEEPEELAQLAPTPGDA 414
>gi|332237268|ref|XP_003267827.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Nomascus
leucogenys]
Length = 826
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|197313456|dbj|BAG69568.1| hypoxia-inducible factor 1 alpha [Daphnia magna]
Length = 842
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 20/189 (10%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L + P PS +E+P F +KH LD+ +D++ LGY+ +L Y L
Sbjct: 235 LVMVGDPIPHPSNIEMPLDSYTFLTKHTLDMKYTYVDEKIYEFLGYTSEDLEGQSAYQLH 294
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKN--SKPDFVISTH 373
H D + +++ + G YRF GG+ W+QT + LVY N S+P V+ H
Sbjct: 295 HAQDNESILKSYKTMFTKGQIQTPPYRFLARHGGYAWVQTQATLVYGNRDSRPQAVVCVH 354
Query: 374 RPLME-EEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQTLAPSPGSAQSGSSS 432
L E E+G +L ++S ++ +H+ LA +PG ++ +
Sbjct: 355 TCLSEIEDGDQILFASQ-----------------AESSPISLAHRPLAAAPGPSRKPPTD 397
Query: 433 TTPQRVNRR 441
PQ + +
Sbjct: 398 WVPQNMTSK 406
>gi|281349362|gb|EFB24946.1| hypothetical protein PANDA_000857 [Ailuropoda melanoleuca]
Length = 812
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 203 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 262
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 263 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 322
Query: 367 DFVISTH 373
++ +
Sbjct: 323 QCIVCVN 329
>gi|340545531|ref|NP_001230013.1| hypoxia-inducible factor 1-alpha isoform 3 [Homo sapiens]
gi|225354050|gb|ACN88547.1| hypoxia-inducible factor 1 alpha isoform I.3 [Homo sapiens]
Length = 850
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 237 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 296
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 297 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 356
Query: 367 DFVISTH 373
++ +
Sbjct: 357 QCIVCVN 363
>gi|440906166|gb|ELR56466.1| Endothelial PAS domain-containing protein 1 [Bos grunniens mutus]
Length = 873
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 196 LHCTGQVKVYNNCPPHSSLCGCKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 255
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 256 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 315
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMD-----FKVSYLDA 399
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD FK L
Sbjct: 316 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESPFKPHLLTM 373
Query: 400 GLNNSYFSDSDQLTPSHQT 418
NS F +S ++ S ++
Sbjct: 374 ---NSIFDNSGKVAVSEKS 389
>gi|332842389|ref|XP_003339308.1| PREDICTED: hypoxia-inducible factor 1-alpha [Pan troglodytes]
gi|332842391|ref|XP_001169001.2| PREDICTED: hypoxia-inducible factor 1-alpha isoform 11 [Pan
troglodytes]
Length = 850
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 237 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 296
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 297 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 356
Query: 367 DFVISTH 373
++ +
Sbjct: 357 QCIVCVN 363
>gi|297298013|ref|XP_002805106.1| PREDICTED: hypoxia-inducible factor 1-alpha [Macaca mulatta]
gi|297298015|ref|XP_002805107.1| PREDICTED: hypoxia-inducible factor 1-alpha [Macaca mulatta]
Length = 767
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 154 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 213
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 214 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 273
Query: 367 DFVISTH 373
++ +
Sbjct: 274 QCIVCVN 280
>gi|149050487|gb|EDM02660.1| endothelial PAS domain protein 1 [Rattus norvegicus]
Length = 873
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELVGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T +VY +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVVYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSDSDQLTPSHQT------ 418
++ + ++E E D++ +MD S L NS F SD + S ++
Sbjct: 335 QCIMCVNY-VLEIEKNDVV--FSMDQTESLFKPHLMAMNSIFDSSDDVALSEKSNYLFTK 391
Query: 419 ----------LAPSPGSA 426
LAP+PG A
Sbjct: 392 LKEEPEDLAQLAPTPGDA 409
>gi|109083868|ref|XP_001099149.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 7 [Macaca
mulatta]
gi|402876371|ref|XP_003901945.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Papio
anubis]
gi|380787331|gb|AFE65541.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
gi|383409707|gb|AFH28067.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
gi|384942934|gb|AFI35072.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
Length = 826
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|124111265|gb|ABM92027.1| HIF1A [Pan troglodytes]
Length = 436
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 137 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 196
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 197 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 256
Query: 367 DFVISTH 373
++ +
Sbjct: 257 QCIVCVN 263
>gi|403264371|ref|XP_003924459.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Saimiri
boliviensis boliviensis]
Length = 850
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 237 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 296
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 297 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 356
Query: 367 DFVISTH 373
++ +
Sbjct: 357 QCIVCVN 363
>gi|397523307|ref|XP_003831677.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Pan
paniscus]
Length = 850
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 237 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 296
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 297 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 356
Query: 367 DFVISTH 373
++ +
Sbjct: 357 QCIVCVN 363
>gi|302745170|gb|ADL62688.1| clock 1b, partial [Phreatichthys andruzzii]
Length = 314
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 213 VEEPNEE--FTSRHSLEWKFLLLDHRAPPIIGYMPFEVLGTSGYDYYHVDDLHSLAKCHE 270
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVI 370
L++ G YRF T W WLQT+ + Y NS+P+F++
Sbjct: 271 HLMQFGKGKSCYYRFLTKGQQWIWLQTNYYITYHQWNSRPEFIV 314
>gi|343055700|gb|AEL79602.1| hypoxia-inducible factor 1 alpha subunit [Ovis aries]
Length = 452
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P PS +EIP F S+H LD+ D+R L+GY EL Y+
Sbjct: 1 CLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEY 60
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIST 372
H D ++ H ++ G YR GG+ W++T + ++Y KNS+P ++
Sbjct: 61 YHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQPQCIVCV 120
Query: 373 H 373
+
Sbjct: 121 N 121
>gi|130486012|ref|NP_001076251.1| hypoxia-inducible factor 1-alpha [Oryctolagus cuniculus]
gi|31095610|gb|AAP43517.1| hypoxia inducible factor 1 alpha subunit [Oryctolagus cuniculus]
Length = 819
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|403264367|ref|XP_003924457.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|407316752|gb|AFU07558.1| hypoxia-inducible factor 1 alpha subunit [Gymnocypris namensis]
Length = 774
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR-GKMLLGYSDTEL 306
+EPPL L IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 210 FKEPPLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERIDTELMGYEPDDL 269
Query: 307 ANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNS 364
N Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS
Sbjct: 270 LNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQATVIYNPKNS 329
Query: 365 KPDFVISTH 373
+P ++ +
Sbjct: 330 QPQCIVCVN 338
>gi|254973565|gb|ACT98611.1| hypoxia inducible factor 1 subunit alpha [Cloning vector
pCMV-HIF-1a-FLAG]
Length = 848
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|194388958|dbj|BAG61496.1| unnamed protein product [Homo sapiens]
Length = 767
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 154 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 213
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 214 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 273
Query: 367 DFVISTH 373
++ +
Sbjct: 274 QCIVCVN 280
>gi|395843414|ref|XP_003794480.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Otolemur
garnettii]
Length = 827
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|417404834|gb|JAA49153.1| Putative transcriptional regulator sim1 [Desmodus rotundus]
Length = 823
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|119601212|gb|EAW80806.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_a [Homo sapiens]
Length = 827
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVISTH 373
++ +
Sbjct: 334 QCIVCVN 340
>gi|343055501|gb|AEL79592.1| hypoxia-inducible factor 1 alpha subunit [Ovis ammon]
Length = 452
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P PS +EIP F S+H LD+ D+R L+GY EL Y+
Sbjct: 1 CLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEY 60
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIST 372
H D ++ H ++ G YR GG+ W++T + ++Y KNS+P ++
Sbjct: 61 YHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQPQCIVCV 120
Query: 373 H 373
+
Sbjct: 121 N 121
>gi|328708222|ref|XP_003243628.1| PREDICTED: single-minded homolog 2-like isoform 3 [Acyrthosiphon
pisum]
Length = 593
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 248 VGLVAVGHSLPPHAITEIKLHSNMFMFRASLDLKLIFLDARVSQLTGYEPQDLIEKTLYH 307
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H +D+ + +H LL G YR DGGW W+Q+ + +V+ ++S+P ++S
Sbjct: 308 YIHGNDIHNMKLSHHTLLLKGQVTTKYYRLLAKDGGWVWVQSYATIVHNSRSSRPHCIVS 367
Query: 372 THRPLMEEEGRDL 384
+ L E E +D+
Sbjct: 368 VNYVLSESEMKDV 380
>gi|338714031|ref|XP_001498492.3| PREDICTED: endothelial PAS domain-containing protein 1 [Equus
caballus]
Length = 877
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 199 LHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 258
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 259 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 318
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 319 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMAM 376
Query: 403 NSYFSDSDQLTPSHQT 418
N F +S ++ S ++
Sbjct: 377 NGIFDNSGEVAASEKS 392
>gi|114653405|ref|XP_001168972.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 10 [Pan
troglodytes]
gi|410226740|gb|JAA10589.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410297974|gb|JAA27587.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410344149|gb|JAA40616.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
Length = 826
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|407316766|gb|AFU07565.1| hypoxia-inducible factor 2 alpha subunit [Lepisosteus platostomus]
Length = 851
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 249 LEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL + +C P PS +++P F S+H +D+ D R L+GY +L
Sbjct: 210 FKEPPLTCVIMMCVPIPHPSNIDMPLDSKTFLSRHSMDMKFTYCDDRVTELMGYCPEDLL 269
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
Y+ H D + +HQ L G + YR GG+ W+++ ++Y +NS+
Sbjct: 270 GRSVYEFYHALDSDSMTKSHQNLCTKGQAISGQYRMLAKHGGYVWVESQGTVIYNSRNSQ 329
Query: 366 PDFVISTHRPLMEEEGRDLLGKRTMD-----FKVSYLDAG---LNNSYFSDSDQLTPSH- 416
P ++ + L E E +L +MD FK L G N + DS +L +
Sbjct: 330 PQCIVCVNYVLSEIEESLVL--FSMDQTESLFKPHVLSMGSFFSNGAAAGDSSELLFTKL 387
Query: 417 -------QTLAPSPGSA 426
LAP+PG A
Sbjct: 388 KEEPEDLAQLAPTPGDA 404
>gi|298104182|gb|ADI54941.1| hypoxia inducible factor 1 alpha subunit [Microtus kikuchii]
Length = 828
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|4504385|ref|NP_001521.1| hypoxia-inducible factor 1-alpha isoform 1 [Homo sapiens]
gi|397523303|ref|XP_003831675.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Pan
paniscus]
gi|2498017|sp|Q16665.1|HIF1A_HUMAN RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha; AltName: Full=ARNT-interacting
protein; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP1; AltName: Full=Class E basic
helix-loop-helix protein 78; Short=bHLHe78; AltName:
Full=Member of PAS protein 1; AltName: Full=PAS
domain-containing protein 8
gi|6636317|gb|AAF20139.1|AF207601_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|6636319|gb|AAF20140.1|AF207602_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|6636338|gb|AAF20149.1|AF208487_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|881346|gb|AAC50152.1| hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|1144013|gb|AAC51210.1| MOP1 [Homo sapiens]
gi|11995455|gb|AAG43026.1| hypoxia-inducible factor 1 alpha subunit [Homo sapiens]
gi|15214788|gb|AAH12527.1| Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Homo sapiens]
gi|32879895|gb|AAP88778.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Homo sapiens]
gi|61362865|gb|AAX42294.1| hypoxia-inducible factor 1 alpha subunit [synthetic construct]
gi|119601213|gb|EAW80807.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_b [Homo sapiens]
gi|119601214|gb|EAW80808.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_b [Homo sapiens]
gi|168278044|dbj|BAG11000.1| hypoxia-inducible factor 1 alpha [synthetic construct]
gi|264685689|dbj|BAI49183.1| hypoxia-inducible factor 1, alpha subunit, variant K12NR [Homo
sapiens]
gi|1097959|prf||2114407A hypoxia-inducible factor 1
Length = 826
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|359320071|ref|XP_003639249.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Canis lupus
familiaris]
Length = 823
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|3790535|gb|AAC68568.1| hypoxia-inducible factor 1 alpha subunit [Homo sapiens]
Length = 826
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|410962416|ref|XP_003987766.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Felis catus]
Length = 733
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|189065475|dbj|BAG35314.1| unnamed protein product [Homo sapiens]
Length = 826
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|149051448|gb|EDM03621.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_a [Rattus
norvegicus]
Length = 521
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVISTH 373
++ +
Sbjct: 334 QCIVCVN 340
>gi|380039562|gb|AFD32325.1| hypoxia-inducible factor 1 alpha, partial [Huso huso]
Length = 134
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 250 EEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
E P ++ IC P PS +E+P F S+H LD+ D+R L+GY +L
Sbjct: 5 ERPMTSMVLICDPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQPEDLLGR 64
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ H D ++ H +L G + YR GG+ W++T + ++Y KNS+P
Sbjct: 65 SVYEYYHALDSDHLTKTHHDLFAKGQAITGQYRMLAKKGGFVWVETQATVIYNTKNSQPQ 124
Query: 368 FVISTHRPL 376
++ + L
Sbjct: 125 CIVCVNYVL 133
>gi|148745435|gb|AAI42230.1| Endothelial PAS domain protein 1 [Bos taurus]
gi|296482559|tpg|DAA24674.1| TPA: endothelial PAS domain protein 1 [Bos taurus]
Length = 870
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHSSLCGCKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELVGYHPQELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMD-----FKVSYLDA 399
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD FK L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESPFKPHLLTM 370
Query: 400 GLNNSYFSDSDQLTPSHQT 418
NS F +S ++ S ++
Sbjct: 371 ---NSIFDNSGKVAVSEKS 386
>gi|301754491|ref|XP_002913080.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Ailuropoda
melanoleuca]
Length = 822
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|63028439|gb|AAY27087.1| hypoxia-inducible factor 1 alpha [Microtus oeconomus]
Length = 828
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|148704554|gb|EDL36501.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_b [Mus
musculus]
Length = 904
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 281 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 340
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 341 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 400
Query: 367 DFVISTH 373
++ +
Sbjct: 401 QCIVCVN 407
>gi|87204423|gb|ABD32159.1| hypoxia-inducible factor 2 alpha [Micropogonias undulatus]
Length = 847
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 249 LEEPPLALFAI-CTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL + C P PS ++ P F S+H +D+ D+R L+GY+ +L
Sbjct: 219 FKEPPLTCAVLMCEPIPHPSNIDTPMDSKTFLSRHSMDMKFTYCDERVTELMGYTPEDLL 278
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
YD H D V +H L G + YR +GG+ W++T ++Y +NS+
Sbjct: 279 GRSIYDFYHALDSDSVTKSHHNLCTKGQAVSGQYRMLAKNGGFVWVETQGTVIYNSRNSQ 338
Query: 366 PDFVISTHRPLMEEEGRDLL 385
P ++ + L + E + ++
Sbjct: 339 PQCIVCINYVLSDIEEKSMI 358
>gi|334310623|ref|XP_001377570.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Monodelphis
domestica]
Length = 1007
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E+P F S+H LD+ D+R L+GY EL
Sbjct: 399 KKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 458
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 459 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 518
Query: 367 DFVISTH 373
++ +
Sbjct: 519 QCIVCVN 525
>gi|20070686|gb|AAH26139.1| Hypoxia inducible factor 1, alpha subunit [Mus musculus]
Length = 836
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|327259020|ref|XP_003214336.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Anolis
carolinensis]
Length = 835
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G I++ N + ++PP+ L IC P PS +E+P F S+H LD+
Sbjct: 216 LHCTGHIRVYDNCNNQTVCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMK 275
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY EL Y+ H D ++ H ++ G YR
Sbjct: 276 FSYCDERITELIGYDPEELLGRSIYEYYHALDSDHLTKTHHDMFAKGQVTTGQYRMLAKQ 335
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTH 373
GG+ W++T + ++Y KNS+P ++ +
Sbjct: 336 GGYVWVETQATVIYNTKNSQPQCIVCVN 363
>gi|148251122|gb|ABQ53550.1| hypoxia-inducible factor 1 alpha [Eospalax cansus]
Length = 818
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|26329679|dbj|BAC28578.1| unnamed protein product [Mus musculus]
Length = 837
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVISTH 373
++ +
Sbjct: 334 QCIVCVN 340
>gi|407316780|gb|AFU07572.1| hypoxia-inducible factor 3 alpha subunit [Acipenser sinensis]
Length = 530
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L +C P PS ++ P F S+H +DL D+R LLGYS +L
Sbjct: 201 EPPLTCLTVLCEPIPDPSHIDFPLDRSAFLSRHSMDLCFTQCDERVTELLGYSPEDLIGH 260
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ H D +V + Q LL G YRF GG+ W +T + ++Y K++ P+
Sbjct: 261 SAYEYHHALDTDHVTKSLQILLSKGQVCTGHYRFLVKHGGFVWAETQATVLYNSKSTLPE 320
Query: 368 FVI 370
V+
Sbjct: 321 AVV 323
>gi|118573327|sp|Q309Z6.1|HIF1A_EOSBA RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|78058356|gb|ABB17537.1| hypoxia inducible factor 1 alpha subunit [Eospalax baileyi]
Length = 819
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVISTH 373
++ +
Sbjct: 334 QCIVCVN 340
>gi|345315439|ref|XP_001510942.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Ornithorhynchus
anatinus]
Length = 814
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E+P F S+H LD+ D+R L+GY EL
Sbjct: 225 KKPPMTCLVLICEPILHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 284
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 285 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 344
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L +DL+
Sbjct: 345 QCIVCVNYVLSGIVQKDLI 363
>gi|2197095|gb|AAC53455.1| hypoxia-inducible factor 1 alpha [Mus musculus]
gi|2289249|gb|AAC53461.1| hypoxia-inducible factor 1 alpha [Mus musculus]
Length = 836
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|226061948|ref|NP_034561.2| hypoxia-inducible factor 1-alpha [Mus musculus]
gi|32470615|sp|Q61221.3|HIF1A_MOUSE RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha; AltName: Full=ARNT-interacting protein
gi|148704553|gb|EDL36500.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_a [Mus
musculus]
Length = 836
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|328708224|ref|XP_001944204.2| PREDICTED: single-minded homolog 2-like isoform 1 [Acyrthosiphon
pisum]
Length = 561
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 216 VGLVAVGHSLPPHAITEIKLHSNMFMFRASLDLKLIFLDARVSQLTGYEPQDLIEKTLYH 275
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H +D+ + +H LL G YR DGGW W+Q+ + +V+ ++S+P ++S
Sbjct: 276 YIHGNDIHNMKLSHHTLLLKGQVTTKYYRLLAKDGGWVWVQSYATIVHNSRSSRPHCIVS 335
Query: 372 THRPLMEEEGRDL 384
+ L E E +D+
Sbjct: 336 VNYVLSESEMKDV 348
>gi|338719808|ref|XP_001493256.3| PREDICTED: hypoxia-inducible factor 1-alpha-like [Equus caballus]
Length = 764
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 154 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 213
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 214 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 273
Query: 367 DFVISTH 373
++ +
Sbjct: 274 QCIVCVN 280
>gi|2113881|emb|CAA70305.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 810
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 201 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 260
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 261 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 320
Query: 367 DFVISTH 373
++ +
Sbjct: 321 QCIVCVN 327
>gi|338191512|gb|AEI84585.1| HIF-alpha [Cynoglossus semilaevis]
Length = 735
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E P F S+H +D+ D+R L+GY +L N
Sbjct: 212 KDPPVPYLILICDPIPHPSNIEAPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLN 271
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 272 RSVYEYYHALDSDHLNKTHHSLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQP 331
Query: 367 DFVISTHRPL--MEEEGRDLLGKRTMDFK 393
V+ + L ++EE L ++T D K
Sbjct: 332 QCVVCVNFVLSGIQEEKLILSLEQTEDVK 360
>gi|74219449|dbj|BAE29500.1| unnamed protein product [Mus musculus]
Length = 836
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|48927335|emb|CAG29396.1| hypoxia inducible factor 1 alpha [Spalax judaei]
Length = 824
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|328708220|ref|XP_003243627.1| PREDICTED: single-minded homolog 2-like isoform 2 [Acyrthosiphon
pisum]
Length = 556
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 211 VGLVAVGHSLPPHAITEIKLHSNMFMFRASLDLKLIFLDARVSQLTGYEPQDLIEKTLYH 270
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H +D+ + +H LL G YR DGGW W+Q+ + +V+ ++S+P ++S
Sbjct: 271 YIHGNDIHNMKLSHHTLLLKGQVTTKYYRLLAKDGGWVWVQSYATIVHNSRSSRPHCIVS 330
Query: 372 THRPLMEEEGRDL 384
+ L E E +D+
Sbjct: 331 VNYVLSESEMKDV 343
>gi|410962414|ref|XP_003987765.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Felis catus]
Length = 824
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|178056663|ref|NP_001116596.1| hypoxia-inducible factor 1-alpha [Sus scrofa]
gi|118136505|gb|ABK62873.1| hypoxia-inducible factor 1alpha [Sus scrofa]
Length = 824
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|4379202|emb|CAA64833.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 810
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 201 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 260
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 261 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 320
Query: 367 DFVISTH 373
++ +
Sbjct: 321 QCIVCVN 327
>gi|51921791|gb|AAU14021.1| hypoxia-inducible factor 1 alpha subunit [Spermophilus
tridecemlineatus]
Length = 821
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|355694631|gb|AER99736.1| hypoxia inducible factor 1, alpha subunit [Mustela putorius furo]
Length = 823
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|2821940|emb|CAA70306.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 822
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|149051449|gb|EDM03622.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_b [Rattus
norvegicus]
Length = 826
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVISTH 373
++ +
Sbjct: 334 QCIVCVN 340
>gi|1389891|gb|AAC52730.1| hypoxia-inducible factor 1 alpha [Mus musculus]
Length = 822
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|13242249|ref|NP_077335.1| hypoxia-inducible factor 1-alpha [Rattus norvegicus]
gi|4580533|gb|AAD24413.1|AF057308_1 hypoxia-inducible factor-1 alpha [Rattus norvegicus]
Length = 823
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVISTH 373
++ +
Sbjct: 334 QCIVCVN 340
>gi|120419452|gb|ABM21545.1| endothelial PAS domain protein 1 [Bos taurus]
Length = 462
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 194 LHCTGQVKVYNNCPPHSSLCGCKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 253
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 254 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 313
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMD-----FKVSYLDA 399
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD FK L
Sbjct: 314 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESPFKPHLLTM 371
Query: 400 GLNNSYFSDSDQLTPSHQT 418
NS F +S ++ S ++
Sbjct: 372 ---NSIFDNSGKVAVSEKS 387
>gi|87280966|gb|ABD36590.1| CLOCK [Podarcis siculus]
Length = 510
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 267 SLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASA 326
S +E P++E F S+H L+ + +D R ++GY E+ GYD H DD +A
Sbjct: 267 STVEEPNEE--FTSRHSLEWKSLFLDPRAPPIIGYLPFEVLGTSGYDYYHVDDPENLAKC 324
Query: 327 HQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
H+ L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 325 HEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>gi|426377113|ref|XP_004055320.1| PREDICTED: hypoxia-inducible factor 1-alpha [Gorilla gorilla
gorilla]
Length = 604
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|296240121|gb|ADH01742.1| hypoxia-inducible factor 2 alpha [Callionymus valenciennei]
Length = 782
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 247 RKLEEPPLALFAI-CTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
R EPPL + C P P+ +E+P + F S+H +D+ D L+GYS +
Sbjct: 207 RGPSEPPLTCAVLMCEPIPHPTNIEMPLESKTFLSRHSMDMKFTYCDDSVTELMGYSPED 266
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KN 363
L YD H D V +HQ L G + YR GG+ W++T ++Y +N
Sbjct: 267 LIGRSVYDFYHALDSDNVTKSHQNLCMKGQAVSRQYRMLAKTGGYVWMETQGTVIYNNRN 326
Query: 364 SKPDFVISTHRPLMEEEGR 382
S+P ++ + L + E +
Sbjct: 327 SQPQCIVCVNYVLSDVEEK 345
>gi|403269576|ref|XP_003926799.1| PREDICTED: endothelial PAS domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 867
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY +L Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELIGYHPEDLLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLIAM 370
Query: 403 NSYFSDSDQLTPSHQT----------------LAPSPGSA 426
NS F S + S ++ LAP+PG A
Sbjct: 371 NSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDA 410
>gi|19716307|gb|AAL95711.1|AF402782_1 hypoxia-inducible factor 2 alpha [Fundulus heteroclitus]
Length = 873
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPLALFAI-CTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +K+ G ++ +EPPL + C P PS +E P F S+H +D+
Sbjct: 198 LHCTGHLKMYDGCPSRVLCGYKEPPLTCAVLMCEPIQHPSNIEAPLDSRTFLSRHNMDMK 257
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D + L+GYS +L Y+ H D V +H L G + YR +
Sbjct: 258 FTYCDDKVTELIGYSPEDLMGRSIYEFYHALDSDSVTKSHHNLCTKGQAVSGQYRMLAKN 317
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ W++T ++Y +NS+P ++ + L + E + ++
Sbjct: 318 GGYVWVETQGTVIYNSRNSQPQCIVCINYVLSDVEEKSVI 357
>gi|307172407|gb|EFN63869.1| Single-minded-like protein 1 [Camponotus floridanus]
Length = 688
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ S+ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 222 VGLLAVGHSLPTSSITEIKLHHNMFMFRASLDLKLIFLDARVAQLTGYDPPDLIEKTLYH 281
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ + AH LL+ G YRF T GGW W+Q+ +V+ ++S+P ++S
Sbjct: 282 YVHGCDVLQLRHAHHILLRKGQVTTRYYRFLTKTGGWVWMQSYVTIVHNSRSSRPHCIVS 341
Query: 372 THRPLMEEEGRDLL 385
+ L E L+
Sbjct: 342 VNYVLTATESTGLI 355
>gi|291386847|ref|XP_002709777.1| PREDICTED: endothelial PAS domain protein 1 [Oryctolagus cuniculus]
Length = 1006
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 333 LHCTGQVKVYNNCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 392
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 393 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVVSGQYRMLAK 452
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--N 402
GG+ WL+T ++Y +N +P ++ + L E E D++ +MD S L
Sbjct: 453 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV--FSMDQTESLFKPHLMTM 510
Query: 403 NSYFSDSDQLTPSHQT 418
NS F S ++ S ++
Sbjct: 511 NSIFDSSGEVAVSEKS 526
>gi|215415905|dbj|BAG85183.1| hypoxia-inducible factor 1 alpha [Crassostrea gigas]
Length = 698
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L I P PS +EIP ++ F S+H +D+ D R K LLGY+ ++L N +D
Sbjct: 210 LLLIGEPIPHPSNIEIPLDQMTFLSRHNMDMKFTYCDDRVKDLLGYNCSDLMNKSLFDYH 269
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D + A++ L+ G YRF GG W+ T ++Y + KP ++ H
Sbjct: 270 HAMDSEVIDQAYKNLIAKGQVMTRQYRFLAKTGGHVWMITQGTVIYNSRTQKPQCIVCVH 329
>gi|126697520|gb|ABO26717.1| hypoxia-inducible factor 1 alpha [Perca fluviatilis]
Length = 749
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP+ L IC P S +E+P F S+H +D+ D+R L+GY +L N
Sbjct: 213 KEPPVPYLVLICDPIQHLSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLN 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQP 332
Query: 367 DFVISTHRPL--MEEEGRDLLGKRTMDFK 393
V+ + L ++EE + L ++ D K
Sbjct: 333 QCVVCVNFVLSGIQEEKQILSLEQIEDVK 361
>gi|348537940|ref|XP_003456450.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oreochromis
niloticus]
Length = 677
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 41/230 (17%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y ++ + K+ G + ++ +G++ + +E +++P+ +S E
Sbjct: 118 EGDMIYLTENVNKHIG-----ITQLELLGQSIYDFVHPCDQEELRDLLTPRLSKKSRTEQ 172
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKL----EEPPL--ALFAICTP 262
SER L RGR K+LH GQ R PP + +C P
Sbjct: 173 T-SERNFFVRMKSTLTTRGRTVNIKSATWKVLHCTGQIRPFGSGSASPPAGRVMTLLCEP 231
Query: 263 FGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAY 322
PS +E P F ++H +DL + R L+GY +L G++ +H D +
Sbjct: 232 IPHPSSVEFPLDTCTFLTRHSMDLRFTHCEGRVAELVGYKPDDLIGRSGFEFLHALDSDH 291
Query: 323 VASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVI 370
+ + LL G YRF N+GG+ W +T + ++Y K S+PD ++
Sbjct: 292 INKSLHTLLSKGQVSTSQYRFLANNGGYVWAETQATVLYNSKTSQPDAIV 341
>gi|358332012|dbj|GAA50744.1| single-minded protein [Clonorchis sinensis]
Length = 838
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L FA P + EI MF + LDL L+ ++ R + G+ EL + Y
Sbjct: 427 LIAFAYAIPSPNANNTEIRLTSGMFMFRASLDLKLIFLEGRIASITGFQPQELIDKTLYQ 486
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
LVH D + AH+ LL G YR T GGW W+Q+ + +V+ ++S+P+ ++S
Sbjct: 487 LVHVVDSVALRRAHETLLIKGQVTTPYYRLMTKTGGWVWMQSYATIVHNSRSSRPNCIVS 546
Query: 372 THRPLMEEEGRDLL 385
+ L E RD L
Sbjct: 547 VNYLLSRPENRDSL 560
>gi|322792391|gb|EFZ16375.1| hypothetical protein SINV_10619 [Solenopsis invicta]
Length = 631
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ S+ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 160 VGLMAVGHSLPTSSITEIKLHHNMFMFRASLDLKLIFLDARVAQLTGYDPPDLIEKTLYH 219
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ + AH LL+ G YRF T GGW W+Q+ +V+ ++S+P ++S
Sbjct: 220 YVHGCDIFQLRHAHHVLLRKGQVTTRYYRFLTKSGGWVWMQSYVTIVHNSRSSRPHCIVS 279
Query: 372 THRPLMEEEGRDLL 385
+ L E L+
Sbjct: 280 VNYVLTGTENTGLI 293
>gi|74223866|dbj|BAE23829.1| unnamed protein product [Mus musculus]
Length = 441
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVIST 372
++
Sbjct: 334 QCIVCV 339
>gi|288887158|gb|ADC55887.1| hypoxia inducible factor-1alpha [Notothenia coriiceps]
Length = 658
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L IC P PS +E+P F S+H +D+ D+R L+GY +L N Y+
Sbjct: 219 LVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPDDLLNRSVYEYY 278
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVI 370
H D ++ H L G YR GG+ W++T + ++Y KNS+P ++
Sbjct: 279 HAMDSDHLTKTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCIV 335
>gi|395745967|ref|XP_002824869.2| PREDICTED: hypoxia-inducible factor 1-alpha [Pongo abelii]
Length = 668
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVIST 372
++
Sbjct: 333 QCIVCV 338
>gi|73970126|ref|XP_531807.2| PREDICTED: endothelial PAS domain-containing protein 1 [Canis lupus
familiaris]
Length = 975
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 299 LHCTGQVKVYNNCPPHSSLCSYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 358
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 359 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 418
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ WL+T ++Y +N +P ++ + L E E D++
Sbjct: 419 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV 459
>gi|407316790|gb|AFU07577.1| hypoxia-inducible factor 2 alpha subunit, partial [Protopterus
annectens]
Length = 727
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
++P LA L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 208 FKDPLLAYLIIVCAPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRITELMGYHSEELL 267
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
Y+ H D + HQ L G YR GG+ W++T ++Y +NS+
Sbjct: 268 GRSVYEFYHALDSENMTKTHQNLCTKGQVISGQYRMLAKHGGYVWIETHGTVIYNSRNSQ 327
Query: 366 PDFVI 370
P +I
Sbjct: 328 PQCII 332
>gi|38374005|gb|AAR19225.1| hypoxia-inducible factor 1 alpha subunit [Canis lupus familiaris]
Length = 786
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 193 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 252
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 253 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 312
Query: 367 DFV 369
+
Sbjct: 313 QCI 315
>gi|407316744|gb|AFU07554.1| hypoxia-inducible factor 1 alpha subunit [Polypterus senegalus]
Length = 801
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
+L IC P PS +E+P F S+H L++ D+R L+GY +L Y+
Sbjct: 219 SLVVICEPIPHPSNIEVPLDSKTFLSRHSLEMKFSYCDERITELMGYQPEDLLGRSVYEY 278
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIST 372
H D ++ H L G + YR +GG+ W++T + ++Y KNS+P ++
Sbjct: 279 YHAMDSDHLTKTHHNLFAKGQATTGQYRMLAKNGGYVWVETQATVIYNSKNSQPQCIVCV 338
Query: 373 HRPLMEEEGRDLL 385
+ L +DL+
Sbjct: 339 NYVLSGVVEKDLI 351
>gi|444705900|gb|ELW47278.1| Endothelial PAS domain-containing protein 1 [Tupaia chinensis]
Length = 833
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 8/183 (4%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 137 LHCTGQVKVYNDCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 196
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 197 KFTYCDDRITELIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVVSGQYRMLAK 256
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNS 404
GG+ WL+T ++Y +N +P ++ + L + D +RT + N+
Sbjct: 257 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLRVQNNSDRKCERTQQLFCPISEIEKNDV 316
Query: 405 YFS 407
FS
Sbjct: 317 VFS 319
>gi|67970146|dbj|BAE01417.1| unnamed protein product [Macaca fascicularis]
Length = 826
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H + G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHGMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|291227639|ref|XP_002733787.1| PREDICTED: hypoxia inducible factor, partial [Saccoglossus
kowalevskii]
Length = 777
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L + P P+ +EIP F S+H +D+ +D R + GY ++L YD
Sbjct: 150 CLVVVGEPIPHPANIEIPLDSQTFLSRHSMDMKFTFVDDRIHEITGYQVSDLIGKSAYDF 209
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKN--SKPDFVIST 372
H D + ++ +L G + YRF GG+ W+QT + ++Y N SKP ++S
Sbjct: 210 CHALDTDKIEKSYHDLYAKGQTSTGQYRFLAKKGGYVWVQTQATVIYNNRTSKPQCIVSV 269
Query: 373 H 373
+
Sbjct: 270 N 270
>gi|147904258|ref|NP_001079101.1| single-minded homolog 2 [Xenopus laevis]
gi|11993330|gb|AAG42690.1| single-minded [Xenopus laevis]
Length = 760
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + +GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKNGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDVEYKEL 340
>gi|332023709|gb|EGI63933.1| Single-minded-like protein 1 [Acromyrmex echinatior]
Length = 688
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ S+ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 219 VGLMAVGHSLPTSSITEIKLNHNMFMFRASLDLKLIFLDARVTPLTGYEPPDLIEKTLYH 278
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ + AH LL+ G YRF T GGW W+Q+ +V+ ++S+P ++S
Sbjct: 279 YVHACDILQLRHAHHVLLRKGQVTTRYYRFLTKTGGWVWMQSYVTIVHNSRSSRPHCIVS 338
Query: 372 THRPLMEEEGRDLL 385
+ L E L+
Sbjct: 339 VNYVLTATENTGLV 352
>gi|318997430|ref|NP_001187230.1| hypoxia induced factor 1 alpha [Ictalurus punctatus]
gi|73426661|gb|AAZ75952.1| hypoxia induced factor 1 alpha [Ictalurus punctatus]
Length = 776
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EP + L IC P PS +E+P F S+H LD+ D+R L+GY EL
Sbjct: 214 FKEPSITYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEPDELL 273
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D +++ H L G YR G+ W++T + ++Y KNS+
Sbjct: 274 NRSVYEYYHALDSDHLSKTHHNLFAKGQVTTGQYRMLAKKAGYVWVETQATVIYNPKNSQ 333
Query: 366 PDFVISTH 373
P V+ +
Sbjct: 334 PQCVVCVN 341
>gi|443702124|gb|ELU00285.1| hypothetical protein CAPTEDRAFT_165634, partial [Capitella teleta]
Length = 487
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ ++ E+ MF + LDL L+ +D R L GY +L Y
Sbjct: 207 VGLVALGHSLPSSAVTEVKLYSSMFMFRASLDLKLIFLDARVAQLTGYEPQDLIEKTLYH 266
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D+ ++ +H LL G YRF DGGW W+Q+ + +V+ ++S+P ++S
Sbjct: 267 YIHACDILHMRYSHHMLLLKGQVTTKYYRFLAKDGGWVWVQSYATIVHNSRSSRPHCIVS 326
Query: 372 THRPLMEEEGRDL 384
+ L + E +DL
Sbjct: 327 VNYVLSDVEAKDL 339
>gi|111143467|gb|ABH06560.1| hypoxia inducible factor isoform 2 [Bos grunniens]
Length = 864
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPLAL-FAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 254 KKPPMTCSVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 313
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 314 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 373
Query: 367 DFVISTH 373
++ +
Sbjct: 374 QCIVCVN 380
>gi|297374832|ref|NP_001165655.1| hypoxia-inducible factor 1-alpha [Xenopus laevis]
gi|32469782|sp|Q9I8A9.1|HIF1A_XENLA RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|8953675|emb|CAB96628.1| hypoxia inducible factor 1 alpha [Xenopus laevis]
Length = 805
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ + IC P PS +E P F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYEPDELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ + + G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSVYEYYHALDSDHLTKPNYNMFTKGQVTTGQYRMLAKKGGYVWVETQATVIYNSKNSQP 333
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L E +DL+
Sbjct: 334 QCIVCVNYVLSEVVEKDLI 352
>gi|345122364|gb|AEN74951.1| hypoxia inducible factor 1 alpha subunit [Capra hircus]
Length = 823
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSISEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + + RDL+
Sbjct: 333 QCIVCVNYVVSGIIQRDLI 351
>gi|348534841|ref|XP_003454910.1| PREDICTED: single-minded homolog 1-A-like [Oreochromis niloticus]
Length = 754
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 IGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVSELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHSCDCFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E + L
Sbjct: 328 VNYVLTETEYKGL 340
>gi|395518589|ref|XP_003763442.1| PREDICTED: single-minded homolog 2 [Sarcophilus harrisii]
Length = 764
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ Y+ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDMFYLRYAHHLLLVKGQVTTKYYRLLSKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E +++
Sbjct: 328 VNYVLTDIEYKEI 340
>gi|241706697|ref|XP_002413286.1| single-minded, putative [Ixodes scapularis]
gi|215507100|gb|EEC16594.1| single-minded, putative [Ixodes scapularis]
Length = 623
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 108 LGLVAVGHSLPPSAITEIKMYANMFMFRASLDLKLIFLDARVAPLTGYEPQDLIEKTLYH 167
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
+H D ++ +H LL G YRF + +GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 168 YIHGYDCLHMRYSHHTLLLKGQVTTKYYRFMSKEGGWVWMQSYATIVHNSRSSRPHCIVS 227
Query: 372 THRPLMEEEGRDL 384
+ L E + ++L
Sbjct: 228 VNYVLSELQAQEL 240
>gi|407316764|gb|AFU07564.1| hypoxia-inducible factor 2 alpha subunit [Acipenser sinensis]
Length = 852
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 249 LEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL + +C P PS +++P F S+H +D+ D+R L+GY EL
Sbjct: 211 FKEPPLTCVVMMCEPIPHPSNIDMPLDSKTFLSRHSMDMKFTYCDERVTELMGYWPEELL 270
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
Y+ H D + +HQ L G + YR GG+ W++T ++Y +NS
Sbjct: 271 GRSVYEFYHALDSDRMTKSHQNLCTKGQAVSSQYRMLAKHGGYVWVETQGTVIYNTRNSH 330
Query: 366 PDFVISTHRPLMEEEGRDLL 385
P ++ + L + E ++
Sbjct: 331 PQCIVCVNFVLSDIEENSVI 350
>gi|390407703|ref|NP_001254578.1| hypoxia-inducible factor 1 alpha [Gasterosteus aculeatus]
gi|126697524|gb|ABO26719.1| hypoxia-inducible factor 1 alpha [Gasterosteus aculeatus]
Length = 756
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EPP L IC P PS +E+P F S+H +D+ D+R L+GY +L +
Sbjct: 213 KEPPAPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLD 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H L G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSVYEYYHALDSDHLNKTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQP 332
Query: 367 DFVISTH 373
V+ +
Sbjct: 333 QCVVCVN 339
>gi|126697516|gb|ABO26715.1| hypoxia-inducible factor 1 alpha [Esox lucius]
Length = 763
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F S+H L++ D+R L+GY+ +L N Y+
Sbjct: 226 LVLVCDPIPHPSNIEAPLDTKTFLSRHTLNMKFTYCDERITELMGYNPEDLLNRSVYEYY 285
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D ++ H L G YR GG+ WL+T + ++Y KNS+P V+ +
Sbjct: 286 HALDSDHLTKTHHNLFTKGQVSTGQYRMLAKRGGFVWLETQATVIYNNKNSQPQCVVCVN 345
Query: 374 RPL--MEEE 380
L +EEE
Sbjct: 346 YVLSGIEEE 354
>gi|432889669|ref|XP_004075303.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oryzias latipes]
Length = 650
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 23/182 (12%)
Query: 259 ICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYD 318
+C P PS +E P F ++H +DL + R L+GY +L Y+ H
Sbjct: 223 LCEPIPHPSSVEFPLDTCTFLTRHSMDLRFTHCEGRVTELVGYKPEDLVGRSAYEFYHAL 282
Query: 319 DLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTHRPL 376
D ++ + LL G YRF N+GG+ W +T + ++Y K S+P+ ++ + L
Sbjct: 283 DSDHMKKSLHTLLSKGQVSTSHYRFLANNGGFVWAETQATVLYSSKTSQPEAIVCLNFIL 342
Query: 377 MEEEGRDLLGKRTMDFKVSYLDAGL----------NNSYFSDSDQLTPSHQTLAPSPGSA 426
E D++ F V +GL +S FSDS P+PGSA
Sbjct: 343 SSVEQPDVV------FSVEQTRSGLLSKTESPNTPQDSGFSDS-----CESDAEPTPGSA 391
Query: 427 QS 428
++
Sbjct: 392 EA 393
>gi|32469606|sp|O35800.1|HIF1A_RAT RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|2632131|emb|CAA70701.1| hypoxia-inducible factor 1 [Rattus norvegicus]
Length = 825
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y K+S+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKDSQP 332
Query: 367 DFVISTH 373
++ +
Sbjct: 333 QCIVCVN 339
>gi|126697514|gb|ABO26714.1| hypoxia-inducible factor 1 alpha [Thymallus thymallus]
Length = 745
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F S+H LD+ D+R +L+ Y +L N Y+
Sbjct: 221 LVLVCDPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERITVLMDYDPEDLLNHSVYEYY 280
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D ++ AH L G YR GG+ W++T + ++Y KNS+P V+ +
Sbjct: 281 HALDSDHLMKAHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNSKNSQPQCVVCVN 340
Query: 374 RPL--MEEE 380
L +EEE
Sbjct: 341 YVLSGIEEE 349
>gi|327268553|ref|XP_003219061.1| PREDICTED: single-minded homolog 2-like [Anolis carolinensis]
Length = 764
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + +GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKNGGWVWIQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDIEYKEL 340
>gi|223648404|gb|ACN10960.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 752
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F S+H LD+ D+R L+GY +L N Y+
Sbjct: 222 LVLVCDPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERITELMGYDPEDLLNRSVYEYY 281
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
+ D ++ H L G YR GG+ W++T + ++Y KNS+P V+ +
Sbjct: 282 YAMDSDHLMKTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVN 341
Query: 374 RPL--MEEEGRDLLGKRTMDFK 393
L +EEE L ++T D +
Sbjct: 342 YVLSDIEEEKMMLSLEQTEDMR 363
>gi|126325353|ref|XP_001374323.1| PREDICTED: single-minded homolog 2 [Monodelphis domestica]
Length = 761
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ Y+ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDMFYLRYAHHLLLVKGQVTTKYYRLLSKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E +++
Sbjct: 328 VNYVLTDIEYKEI 340
>gi|344273483|ref|XP_003408551.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Loxodonta
africana]
Length = 871
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 250 EEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E+ F S+H LD+ D+R L+GY EL
Sbjct: 262 KKPPMTCLVLICEPIPHPSNIEVRIDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 321
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
YD H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 322 RSIYDYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 381
Query: 367 DFVISTH 373
++ +
Sbjct: 382 QCIVCVN 388
>gi|290760626|gb|ADD59898.1| hypoxia-inducible factor 3 alpha [Mustelus canis]
Length = 468
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 237 GRIKILH--GQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
G +K L+ G+ L E + L +C P PS +E P F ++H +DL D R
Sbjct: 195 GYMKTLNQEGEASSLGESYMTL--LCEPIPHPSCVEFPLDSSTFLTRHTMDLHFSQCDGR 252
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
L+GY +L YD H D ++ + LL G YRF +GG+ W +
Sbjct: 253 VTELVGYHPNDLIGRSAYDFFHALDFDHLTRSLHVLLSKGQVCTSRYRFLAKNGGFVWTE 312
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
T + ++Y K S+P+ V+ + L E D++
Sbjct: 313 TQATVLYNSKTSQPEAVVCLNFILSAVEEADVV 345
>gi|126697526|gb|ABO26720.1| hypoxia-inducible factor 1 alpha [Platichthys flesus]
Length = 778
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 249 LEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
L+E P+ L IC P PS +E+P F S+H +D+ D+R L+GY +L
Sbjct: 212 LKEAPVPYLVLICDPVPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLL 271
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
N Y+ H D ++ +H L G YR GG+ W++T + +Y KNS+
Sbjct: 272 NRSVYEYYHAMDSDHLTKSHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATDIYNNKNSQ 331
Query: 366 PDFVISTHRPL--MEEEGRDLLGKRTMD 391
P V+ + L ++EE L ++T D
Sbjct: 332 PQCVVCVNFVLSGIQEEKLILSLEQTED 359
>gi|118083884|ref|XP_416724.2| PREDICTED: single-minded homolog 2 [Gallus gallus]
Length = 764
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKQGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQT 418
+ L + E ++L ++S ++ S FS + ++ S +T
Sbjct: 328 VNYVLTDIEYKEL--------QLSLDQVTISKSQFSCRNSVSTSQET 366
>gi|347968906|ref|XP_311959.5| AGAP002942-PA [Anopheles gambiae str. PEST]
gi|333467787|gb|EAA07597.6| AGAP002942-PA [Anopheles gambiae str. PEST]
Length = 1726
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 240 KILHGQNR---KLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGK 296
K+LH K +E L AI P P+ +E+P F ++H L + +D
Sbjct: 342 KVLHVTGHIACKDKEGQRQLVAIARPLPHPANIEVPLGSSTFLTQHTLGMKFSYVDDIML 401
Query: 297 MLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTS 356
LLGY ++L YD H D ++ S + ++ G S YRF GG+ W+ T
Sbjct: 402 SLLGYKPSDLLGKSLYDCHHGTDAEHLMSTFKHVISKGQSETSRYRFLAKTGGYAWVVTQ 461
Query: 357 SRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSH 416
+ ++Y KP V+ + L E G G+R+ K++ S+Q+ +
Sbjct: 462 ATVIYDKQKPHSVVCVNYVLSESIGS---GRRSGSVKIA-----------PQSEQVVGLY 507
Query: 417 QTLAPSPGSAQSGSSSTTPQRVNRR 441
++L PG QSG SS + R R
Sbjct: 508 RSLHCFPG--QSGLSSISVLRACVR 530
>gi|444517437|gb|ELV11560.1| Neuronal PAS domain-containing protein 2, partial [Tupaia
chinensis]
Length = 444
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
+R ++GY E+ GYD H DDL +A HQ L++ G YRF T W W
Sbjct: 20 KRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWIW 79
Query: 353 LQTSSRLVYK--NSKPDFVISTH 373
LQT + Y NSKP+F++ TH
Sbjct: 80 LQTHYYITYHQWNSKPEFIVCTH 102
>gi|47224666|emb|CAG03650.1| unnamed protein product [Tetraodon nigroviridis]
Length = 695
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 143 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 202
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 203 HVHSCDIFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 262
Query: 372 THRPLMEEEGRDL 384
+ L + E R +
Sbjct: 263 VNYVLTDTEYRGM 275
>gi|18859359|ref|NP_571911.1| single-minded homolog 2 [Danio rerio]
gi|18056651|gb|AAL58099.1|AF363019_1 single-minded protein [Danio rerio]
gi|40850960|gb|AAH65360.1| Single-minded homolog 2 (Drosophila) [Danio rerio]
Length = 585
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L A+ P L EI MF + LDL L+ +D R L G+ +L Y V
Sbjct: 207 LVAVAHSLPPSGLTEIKLHSNMFMFRASLDLKLIFLDSRVSELTGHEPQDLIEKTLYHHV 266
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S +
Sbjct: 267 HGCDVFHLRFAHHLLLVKGQVTTRYYRLLSKRGGWVWVQSCATIVHNSRSSRPHCIVSVN 326
Query: 374 RPLMEEEGRDL-LGKRTMDFKVSYLDA 399
L + E R+L L + ++SY D
Sbjct: 327 YVLTDVEYRELQLSEDQRRCRLSYKDC 353
>gi|344291845|ref|XP_003417640.1| PREDICTED: endothelial PAS domain-containing protein 1 [Loxodonta
africana]
Length = 891
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 237 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLG 296
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 297 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 356
Query: 367 DFVISTHRPLMEEEGRDLL 385
+ + L + E D++
Sbjct: 357 QCITCVNYVLSDIEKNDVV 375
>gi|449283789|gb|EMC90383.1| Single-minded like protein 2 [Columba livia]
Length = 677
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQT 418
+ L + E ++L ++S ++ S FS + ++ S +T
Sbjct: 328 VNYVLTDIEYKEL--------QLSLDQVTISKSQFSCRNSVSTSQET 366
>gi|318037285|ref|NP_001187141.1| hypoxia induced factor-like factor [Ictalurus punctatus]
gi|73426664|gb|AAZ75953.1| hypoxia induced factor-like factor [Ictalurus punctatus]
Length = 627
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 237 GRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGK 296
GR+K L+ + + +C P PS +E P F ++H +DL + D R
Sbjct: 193 GRMKTLNQEGEGSSPVGSYMTLLCEPIPHPSCVEFPLDSSTFLTRHNMDLHFIQCDGRVT 252
Query: 297 MLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTS 356
L+GY +L YD +H D ++ + LL G YRF +GG+ W +T
Sbjct: 253 ELVGYHPNDLIGRSAYDFIHALDFDHLTRSLHVLLSKGQVCTYHYRFWLVNGGFVWTETH 312
Query: 357 SRLVY--KNSKPDFVISTHRPLMEEEGRD 383
++Y + S+P+ V+ + L E D
Sbjct: 313 VHVLYNSRTSQPEAVVCLNFILSAVEEAD 341
>gi|58272373|gb|AAW69834.1| hypoxia-inducible factor 1 alpha [Gymnocypris przewalskii]
Length = 773
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 250 EEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
E P L IC P PS +E+P S+H LD+ D+R L+GY +L N
Sbjct: 212 ESPLTYLVLICEPIPHPSNIEVPLDSKTSLSRHTLDMKFSYCDERITELMGYEPDDLLNK 271
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ H D ++ H L G + YR GG+ W++T + ++Y KNS+P
Sbjct: 272 SVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQATVIYNPKNSQPQ 331
Query: 368 FVISTH 373
++ +
Sbjct: 332 CIVCVN 337
>gi|301624571|ref|XP_002941575.1| PREDICTED: single-minded homolog 2-like [Xenopus (Silurana)
tropicalis]
Length = 760
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ +H LL G YR + +GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYSHHLLLVKGQVTTKYYRLLSKNGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDVEYKEL 340
>gi|148372331|gb|ABQ63087.1| hypoxia-inducible factor-1alpha [Callinectes sapidus]
Length = 497
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L A+ P PS +E P + F S+H LD+ +D K GY EL Y+L
Sbjct: 183 LAALAIPVPHPSNIEFPLDKQTFVSRHSLDMKFTYVDSNAKEFCGYLSEELVGRSVYELH 242
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D + A++ LL G YRF GG+ WL T + L++ + +KP +V+ +
Sbjct: 243 HALDTNLIQDAYKNLLNKGQVETSRYRFLARGGGYVWLVTQATLIHGPRENKPQYVVCLN 302
Query: 374 RPLMEEE 380
+ E E
Sbjct: 303 YVVSEVE 309
>gi|224042489|ref|XP_002189239.1| PREDICTED: single-minded homolog 2 [Taeniopygia guttata]
Length = 766
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 214 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 273
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 274 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKQGGWVWVQSYATIVHNSRSSRPHCIVS 333
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 334 VNYVLTDIEYKEL 346
>gi|194746812|ref|XP_001955848.1| GF24890 [Drosophila ananassae]
gi|190623130|gb|EDV38654.1| GF24890 [Drosophila ananassae]
Length = 959
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL Y+ +
Sbjct: 370 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYAPED 429
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR +GG+ WLQT + +V KN
Sbjct: 430 LVNKSMYSLCHAEDANRLRKSHTDLIEKGQVLTGYYRLMNKNGGYTWLQTCATVVCSTKN 489
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +L+
Sbjct: 490 ADEQNIICVNYVISNRENENLI 511
>gi|395856625|ref|XP_003800723.1| PREDICTED: single-minded homolog 2 [Otolemur garnettii]
Length = 614
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSRRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|390350866|ref|XP_783102.3| PREDICTED: endothelial PAS domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 933
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 252 PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGG 311
P L I +P PS +E+P F ++H +D+ D+R + L+GY EL
Sbjct: 224 PTPCLVLIASPIPHPSNIEVPLDCSAFLTRHSMDMKFTYCDERIEQLMGYIPNELVGQSF 283
Query: 312 YDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKN--SKPDFV 369
Y H D + ++++L G + YRF +GG+ WL+T + ++Y N +KP +
Sbjct: 284 YVYYHALDGQLIDKSYKDLYAKGQTSTGRYRFLAKNGGYMWLETQATIIYNNKTNKPQCI 343
Query: 370 ISTH 373
+ +
Sbjct: 344 VCVN 347
>gi|380011376|ref|XP_003689783.1| PREDICTED: single-minded homolog 1-A-like [Apis florea]
Length = 738
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ L E+ + MF + LDL L+ +D L GY +L Y
Sbjct: 257 VGLLAVGHSLPGRCLTEVKLYQNMFMFRASLDLKLIFVDANVSQLTGYDPPDLIEKTLYH 316
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ + AH LL G YRF T GGW W+Q+ +V+ ++S+P ++S
Sbjct: 317 YVHGCDMMQLRHAHGTLLYKGQVITKYYRFLTKSGGWVWMQSYVTIVHNSRSSRPHCIVS 376
Query: 372 THRPLMEEEGRDLL 385
+ L + E DLL
Sbjct: 377 VNYVLTKPENTDLL 390
>gi|328792532|ref|XP_394146.4| PREDICTED: hypothetical protein LOC410669 [Apis mellifera]
Length = 738
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ L E+ + MF + LDL L+ +D L GY +L Y
Sbjct: 260 VGLLAVGHSLPGRCLTEVKLYQNMFMFRASLDLKLIFVDANVSQLTGYDPPDLIEKTLYH 319
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ + AH LL G YRF T GGW W+Q+ +V+ ++S+P ++S
Sbjct: 320 YVHGCDMMQLRHAHGTLLYKGQVITKYYRFLTKSGGWVWMQSYVTIVHNSRSSRPHCIVS 379
Query: 372 THRPLMEEEGRDLL 385
+ L + E DLL
Sbjct: 380 VNYVLTKPENTDLL 393
>gi|340708761|ref|XP_003392990.1| PREDICTED: single-minded homolog 1-A-like [Bombus terrestris]
Length = 738
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ L E+ + MF + LDL L+ +D L GY +L Y
Sbjct: 262 VGLLAVGHSLPGRCLTEVKLYQNMFMFRASLDLKLIFVDANVSQLTGYDPPDLIEKTLYH 321
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ + AH LL G YRF T GGW W+Q+ +V+ ++S+P ++S
Sbjct: 322 YVHGCDMMQLRHAHGTLLYKGQVITKYYRFLTKSGGWVWMQSYVTIVHNSRSSRPHCIVS 381
Query: 372 THRPLMEEEGRDLL 385
+ L + E DLL
Sbjct: 382 VNYVLTKPENTDLL 395
>gi|374279662|gb|AEZ04012.1| hypoxia-inducible factor alpha, partial [Callinectes sapidus]
Length = 1026
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L A+ P PS +E P + F S+H LD+ +D K GY EL Y+L
Sbjct: 193 LVALAIPVPHPSNIEFPLDKQTFVSRHSLDMKFTYVDSNVKEFCGYLSEELVGRSVYELH 252
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D + A++ LL G YRF GG+ WL T + L++ + +KP +V+ +
Sbjct: 253 HALDTNLIQDAYKNLLNKGQVETSRYRFLARGGGYVWLVTQATLIHGPRENKPQYVVCLN 312
Query: 374 RPLMEEE 380
+ E E
Sbjct: 313 YVVSEVE 319
>gi|350427755|ref|XP_003494869.1| PREDICTED: single-minded homolog 2-like [Bombus impatiens]
Length = 738
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ L E+ + MF + LDL L+ +D L GY +L Y
Sbjct: 262 VGLLAVGHSLPGRCLTEVKLYQNMFMFRASLDLKLIFVDANVSQLTGYDPPDLIEKTLYH 321
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ + AH LL G YRF T GGW W+Q+ +V+ ++S+P ++S
Sbjct: 322 YVHGCDMMQLRHAHGTLLYKGQVITKYYRFLTKSGGWVWMQSYVTIVHNSRSSRPHCIVS 381
Query: 372 THRPLMEEEGRDLL 385
+ L + E DLL
Sbjct: 382 VNYVLTKPENTDLL 395
>gi|195167721|ref|XP_002024681.1| GL22602 [Drosophila persimilis]
gi|194108086|gb|EDW30129.1| GL22602 [Drosophila persimilis]
Length = 1106
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 245 QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDT 304
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL Y+
Sbjct: 590 HSRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLKVAHCEPRVSDLLDYTPE 649
Query: 305 ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--K 362
+L N Y L H +D + +H +L++ G YR GG+ WLQT + +V K
Sbjct: 650 DLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTK 709
Query: 363 NSKPDFVISTHRPLMEEEGRDLL 385
N+ +I + + E +L+
Sbjct: 710 NADEQNIICVNYVISNRENENLI 732
>gi|218683813|gb|ACL00861.1| CLOCK [Kryptolebias marmoratus]
Length = 741
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 280 SKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMI 339
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 249 SRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLEILAKCHEHLMRYGKGKTC 308
Query: 340 AYRFQTNDGGWQWLQTSSRLVYKN--SKPDFVISTHRPLMEEEGR 382
YR T W WLQT + Y S+P+F++ TH + E R
Sbjct: 309 YYRSLTKGQQWIWLQTHYYITYHQWTSRPEFIVCTHTVVSYAEVR 353
>gi|327261480|ref|XP_003215558.1| PREDICTED: single-minded homolog 1-like [Anolis carolinensis]
Length = 769
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHSCDTFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|326916149|ref|XP_003204373.1| PREDICTED: single-minded homolog 1-like, partial [Meleagris
gallopavo]
Length = 592
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 34 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 93
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 94 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 153
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 154 VNYVLTDTEYKGL 166
>gi|157502175|ref|NP_001098812.1| hypoxia-inducible factor 3-alpha [Bos taurus]
gi|157279353|gb|AAI53227.1| HIF3A protein [Bos taurus]
gi|296477442|tpg|DAA19557.1| TPA: hypoxia inducible factor 3, alpha subunit [Bos taurus]
Length = 669
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 93/241 (38%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG N + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHNIFDFIHPCDQEELQDALTPRQSLSKKKPE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 158 APTERCFSLRMKSTLSSRGRTLNLKAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 218 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V + LL G + YRF GG+ W QT + +V P + ++
Sbjct: 278 IHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCV 337
Query: 373 H 373
H
Sbjct: 338 H 338
>gi|30089690|ref|NP_835740.1| single-minded homolog 1-A [Danio rerio]
gi|82111460|sp|Q98SJ5.1|SIM1A_DANRE RecName: Full=Single-minded homolog 1-A
gi|13506717|gb|AAK27261.1| single-minded 1 [Danio rerio]
Length = 745
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHSCDTFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|449331544|gb|AGE97172.1| hypoxia inducible factor-1alpha [Haliotis diversicolor]
Length = 711
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L A+ P P+ +E P F SKH +++S D R + L+GY++ L Y+
Sbjct: 215 LLAVGEPIPHPANIEAPLDSSTFLSKHNMNMSFTYCDDRIQDLIGYNNDNLIGKSLYNYH 274
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKN--SKPDFVISTH 373
H D V A ++L G + YRF +GG+ W+ T ++Y N KP +V+ H
Sbjct: 275 HALDSEIVEKAFKDLFAKGQTMTGQYRFLAKNGGYAWVITQGTIIYNNRTQKPQWVVCVH 334
Query: 374 RPLMEEEGRDLL 385
L + ++++
Sbjct: 335 YVLSAIQEKNMI 346
>gi|334325397|ref|XP_001368705.2| PREDICTED: aryl hydrocarbon receptor repressor [Monodelphis
domestica]
Length = 718
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
+ +G++K L GQ +K L P L+LF + P PS+ E+ K V+ ++K K D++
Sbjct: 218 MQFQGKLKFLFGQKKKTPSGTLLPPQLSLFCVVVPILLPSVTEMKMKNVLLRAKQKADVA 277
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
S D + K ++EL H+ Q + G +G+ ++ Q ND
Sbjct: 278 -ASTDAKAKTA-ALCESELQGR-----THF----------QGVKNNGENGVSVFKVQAND 320
Query: 348 GGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEE 380
W W+Q +++L+Y++ D+++S+ EEE
Sbjct: 321 DHWVWVQANTQLLYRSGCSDYLLSSQPGAKEEE 353
>gi|213511440|ref|NP_001133494.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
gi|209154226|gb|ACI33345.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 628
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 252 PPLALF--AICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
PP F +C P PS +E P + F ++H +DL D R L+GY +L
Sbjct: 211 PPAGSFMTVLCEPIPHPSSVEFPLDQSTFLTRHSMDLRFTHCDGRVSELVGYEPEDLIGK 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKN--SKPD 367
Y H D +V + LL G YRF GG+ W +T + ++Y N S+P+
Sbjct: 271 SAYKFHHALDSDHVTKSLHILLSKGQVCTSLYRFLAKSGGFVWAETQATVIYNNKTSQPE 330
Query: 368 FVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLT 413
V+ + L E D++ F V GL + S++ + T
Sbjct: 331 AVVCLNFILSVVEQADVV------FSVEQTGCGLKSDPVSEASEET 370
>gi|432945494|ref|XP_004083626.1| PREDICTED: single-minded homolog 1-like [Oryzias latipes]
Length = 711
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 161 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 220
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 221 HVHSCDIFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCIVS 280
Query: 372 THRPLMEEE 380
+ L + E
Sbjct: 281 VNYVLTDTE 289
>gi|256089970|ref|XP_002581006.1| meso-ectoderm gene expression control protein; single-minded
[Schistosoma mansoni]
Length = 673
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 238 RIKILHGQNRKL-EEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGK 296
R++++H + + L FA P + EI MF + LDL L+ ++ R
Sbjct: 106 RVRVIHLDGYQYYQNLGLISFAYAIPSPNTNNTEIRLSMDMFMFRASLDLKLIFLEGRIS 165
Query: 297 MLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTS 356
+ G+ EL + Y LVH D+A + +H+ LL G YR GGW W+Q+
Sbjct: 166 QITGFQPQELVDKTLYQLVHTADVASLRHSHEILLNKGQVTTPYYRLLNKSGGWVWIQSY 225
Query: 357 SRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+ +++ ++S+P+ V+S + L E E R+
Sbjct: 226 ATIIHNSRSSRPNCVVSVNYLLSEIECRE 254
>gi|301605109|ref|XP_002932187.1| PREDICTED: single-minded homolog 1-like [Xenopus (Silurana)
tropicalis]
Length = 763
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|360044432|emb|CCD81980.1| meso-ectoderm gene expression control protein [Schistosoma mansoni]
Length = 672
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 238 RIKILHGQNRKL-EEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGK 296
R++++H + + L FA P + EI MF + LDL L+ ++ R
Sbjct: 105 RVRVIHLDGYQYYQNLGLISFAYAIPSPNTNNTEIRLSMDMFMFRASLDLKLIFLEGRIS 164
Query: 297 MLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTS 356
+ G+ EL + Y LVH D+A + +H+ LL G YR GGW W+Q+
Sbjct: 165 QITGFQPQELVDKTLYQLVHTADVASLRHSHEILLNKGQVTTPYYRLLNKSGGWVWIQSY 224
Query: 357 SRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+ +++ ++S+P+ V+S + L E E R+
Sbjct: 225 ATIIHNSRSSRPNCVVSVNYLLSEIECRE 253
>gi|354504925|ref|XP_003514523.1| PREDICTED: single-minded homolog 1 [Cricetulus griseus]
gi|344258879|gb|EGW14983.1| Single-minded-like 1 [Cricetulus griseus]
Length = 765
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|331687645|gb|AED87588.1| hypoxia-inducible factor 1 alpha [Crassostrea virginica]
Length = 701
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L I P PS +E+P + F S+H +D+ D R K LLGY+ ++L N +D
Sbjct: 209 LLLIGEPIPHPSNIEVPLDRMTFLSRHNMDMKFTYCDDRVKDLLGYNCSDLINKSLFDYH 268
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D + +++ L+ G YRF GG W+ T ++Y + KP ++ H
Sbjct: 269 HATDSEVIDHSYRNLVAKGQVMTGQYRFLAKTGGHVWMITQGTVIYNSRTQKPQCIVCVH 328
>gi|410916801|ref|XP_003971875.1| PREDICTED: single-minded homolog 1-like [Takifugu rubripes]
Length = 760
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDIFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEE 380
+ L + E
Sbjct: 328 VNYVLTDTE 336
>gi|380039564|gb|AFD32326.1| hypoxia-inducible factor 2 alpha, partial [Acipenser persicus]
Length = 183
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 249 LEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
+EPPL + +C P PS +++P F S+H +D+ D+R L+GY EL
Sbjct: 50 FKEPPLTCVVMMCEPIPHPSNIDMPLDSKTFLSRHSMDMKFTYCDERVTELMGYWPEELL 109
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSK 365
Y+ H D + +HQ L G + YR GG+ WL ++Y +NS
Sbjct: 110 GRSVYEFYHALDSDSMTKSHQNLCTKGQAVSSQYRMLAKHGGYVWLVAQGTVIYNTRNSH 169
Query: 366 PDFVISTHRPLME 378
P ++ + L E
Sbjct: 170 PQCIVCVNYVLSE 182
>gi|348541611|ref|XP_003458280.1| PREDICTED: single-minded homolog 1-like [Oreochromis niloticus]
Length = 761
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHSCDIFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEE 380
+ L + E
Sbjct: 328 VNYVLTDTE 336
>gi|195012446|ref|XP_001983647.1| GH15456 [Drosophila grimshawi]
gi|193897129|gb|EDV95995.1| GH15456 [Drosophila grimshawi]
Length = 1029
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTEL 306
RK + P L + A+ PPS+ EI + MF ++ DL + + R LL Y+ +L
Sbjct: 372 RKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRIAHCEPRVSDLLDYTPEDL 431
Query: 307 ANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKNS 364
N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN+
Sbjct: 432 VNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNA 491
Query: 365 KPDFVISTHRPLMEEEGRDLL 385
+I + + E +L+
Sbjct: 492 DEQNIICVNYVISNRENENLI 512
>gi|153945860|ref|NP_035506.2| single-minded homolog 1 [Mus musculus]
gi|6175033|sp|Q61045.3|SIM1_MOUSE RecName: Full=Single-minded homolog 1; Short=mSIM1
gi|1651193|dbj|BAA11467.1| mSim1 [Mus musculus]
gi|3138809|dbj|BAA28270.1| mSim1 [Mus musculus]
gi|148673108|gb|EDL05055.1| single-minded homolog 1 (Drosophila) [Mus musculus]
gi|182887925|gb|AAI60194.1| Single-minded homolog 1 (Drosophila) [synthetic construct]
Length = 765
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|118088683|ref|XP_419817.2| PREDICTED: single-minded homolog 1 [Gallus gallus]
Length = 766
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|449271560|gb|EMC81866.1| Single-minded like protein 1 [Columba livia]
Length = 766
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|224048380|ref|XP_002196673.1| PREDICTED: single-minded homolog 1 [Taeniopygia guttata]
Length = 766
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|1155056|gb|AAA96754.1| trachealess [Drosophila melanogaster]
Length = 924
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 339 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 398
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 399 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 458
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 459 ADEQNIICVNYVISNRENENMI 480
>gi|126310365|ref|XP_001367899.1| PREDICTED: single-minded homolog 1 [Monodelphis domestica]
Length = 765
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|124054141|gb|ABM89259.1| SIM1 [Pongo pygmaeus]
Length = 613
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 55 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 114
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 115 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 174
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 175 VNYVLTDTEYKGL 187
>gi|390478207|ref|XP_002807815.2| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2 [Callithrix
jacchus]
Length = 651
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|198467103|ref|XP_001354251.2| GA19928 [Drosophila pseudoobscura pseudoobscura]
gi|198149510|gb|EAL31304.2| GA19928 [Drosophila pseudoobscura pseudoobscura]
Length = 982
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 245 QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDT 304
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL Y+
Sbjct: 371 HSRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLKVAHCEPRVSDLLDYTPE 430
Query: 305 ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YK 362
+L N Y L H +D + +H +L++ G YR GG+ WLQT + +V K
Sbjct: 431 DLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTK 490
Query: 363 NSKPDFVISTHRPLMEEEGRDLL 385
N+ +I + + E +L+
Sbjct: 491 NADEQNIICVNYVISNRENENLI 513
>gi|120974098|gb|ABM46638.1| SIM1 [Gorilla gorilla]
Length = 680
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 122 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 181
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 182 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 241
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 242 VNYVLTDTEYKGL 254
>gi|395534668|ref|XP_003769362.1| PREDICTED: single-minded homolog 1 [Sarcophilus harrisii]
Length = 765
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|342672107|gb|AEL30808.1| FI13840p1 [Drosophila melanogaster]
Length = 929
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 344 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 403
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 404 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 463
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 464 ADEQNIICVNYVISNRENENMI 485
>gi|195583266|ref|XP_002081444.1| GD25707 [Drosophila simulans]
gi|194193453|gb|EDX07029.1| GD25707 [Drosophila simulans]
Length = 958
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 373 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 432
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 433 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 492
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 493 ADEQNIICVNYVISNRENENMI 514
>gi|195336324|ref|XP_002034791.1| trachealess [Drosophila sechellia]
gi|194127884|gb|EDW49927.1| trachealess [Drosophila sechellia]
Length = 876
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 371 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 430
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 431 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 490
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 491 ADEQNIICVNYVISNRENENMI 512
>gi|109072171|ref|XP_001086054.1| PREDICTED: single-minded homolog 1 [Macaca mulatta]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|157821739|ref|NP_001101111.1| single-minded homolog 1 [Rattus norvegicus]
gi|149046904|gb|EDL99652.1| single-minded 1 (predicted) [Rattus norvegicus]
Length = 765
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|301773192|ref|XP_002922016.1| PREDICTED: single-minded homolog 1-like [Ailuropoda melanoleuca]
gi|281347050|gb|EFB22634.1| hypothetical protein PANDA_010941 [Ailuropoda melanoleuca]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|149640516|ref|XP_001506044.1| PREDICTED: single-minded homolog 1 [Ornithorhynchus anatinus]
Length = 764
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|402867751|ref|XP_003897999.1| PREDICTED: single-minded homolog 1 [Papio anubis]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|297678768|ref|XP_002817234.1| PREDICTED: single-minded homolog 1 [Pongo abelii]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|20151809|gb|AAM11264.1| RH17284p [Drosophila melanogaster]
Length = 902
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 317 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 376
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 377 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 436
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 437 ADEQNIICVNYVISNRENENMI 458
>gi|1173581|gb|AAA96257.1| bHLH-PAS protein [Drosophila melanogaster]
Length = 949
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 364 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 423
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 424 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 483
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 484 ADEQNIICVNYVISNRENENMI 505
>gi|195490113|ref|XP_002093007.1| GE21022 [Drosophila yakuba]
gi|194179108|gb|EDW92719.1| GE21022 [Drosophila yakuba]
Length = 958
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 373 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 432
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 433 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 492
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 493 ADEQNIICVNYVISNRENENMI 514
>gi|116007754|ref|NP_001036575.1| trachealess, isoform B [Drosophila melanogaster]
gi|113194869|gb|ABI31226.1| trachealess, isoform B [Drosophila melanogaster]
gi|381388785|gb|AFG26510.1| FI17826p1 [Drosophila melanogaster]
Length = 929
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 344 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 403
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 404 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 463
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 464 ADEQNIICVNYVISNRENENMI 485
>gi|442629208|ref|NP_001261210.1| trachealess, isoform G [Drosophila melanogaster]
gi|440215074|gb|AGB93905.1| trachealess, isoform G [Drosophila melanogaster]
Length = 923
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 338 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 397
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 398 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 457
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 458 ADEQNIICVNYVISNRENENMI 479
>gi|73973608|ref|XP_539058.2| PREDICTED: single-minded homolog 1 isoform 1 [Canis lupus
familiaris]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|332218557|ref|XP_003258422.1| PREDICTED: single-minded homolog 1 [Nomascus leucogenys]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|21614542|ref|NP_005059.2| single-minded homolog 1 [Homo sapiens]
gi|426354083|ref|XP_004044499.1| PREDICTED: single-minded homolog 1 [Gorilla gorilla gorilla]
gi|109940166|sp|P81133.2|SIM1_HUMAN RecName: Full=Single-minded homolog 1; AltName: Full=Class E basic
helix-loop-helix protein 14; Short=bHLHe14
gi|108752102|gb|AAI11932.1| SIM1 protein [synthetic construct]
gi|110645561|gb|AAI18501.1| SIM1 protein [synthetic construct]
gi|119568836|gb|EAW48451.1| single-minded homolog 1 (Drosophila) [Homo sapiens]
gi|307684428|dbj|BAJ20254.1| single-minded homolog 1 [synthetic construct]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|159884115|gb|ABX00736.1| IP17239p [Drosophila melanogaster]
Length = 929
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 344 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 403
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 404 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 463
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 464 ADEQNIICVNYVISNRENENMI 485
>gi|194864604|ref|XP_001971021.1| GG14662 [Drosophila erecta]
gi|190652804|gb|EDV50047.1| GG14662 [Drosophila erecta]
Length = 961
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 373 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 432
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 433 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 492
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 493 ADEQNIICVNYVISNRENENMI 514
>gi|403261071|ref|XP_003922958.1| PREDICTED: single-minded homolog 1 [Saimiri boliviensis
boliviensis]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|442629204|ref|NP_001261208.1| trachealess, isoform E [Drosophila melanogaster]
gi|440215072|gb|AGB93903.1| trachealess, isoform E [Drosophila melanogaster]
Length = 952
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 367 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 426
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 427 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 486
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 487 ADEQNIICVNYVISNRENENMI 508
>gi|397507866|ref|XP_003824402.1| PREDICTED: single-minded homolog 1 [Pan paniscus]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|355561927|gb|EHH18559.1| hypothetical protein EGK_15194 [Macaca mulatta]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|149722832|ref|XP_001503954.1| PREDICTED: single-minded homolog 1 [Equus caballus]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|410959734|ref|XP_003986456.1| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 1 [Felis
catus]
Length = 760
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|344264587|ref|XP_003404373.1| PREDICTED: single-minded homolog 1 [Loxodonta africana]
Length = 765
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|321473894|gb|EFX84860.1| putative hypoxia inducible factor-1 alpha [Daphnia pulex]
Length = 846
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L + P PS +E+P F +KH LD+ +D++ LGY +L Y L
Sbjct: 238 LVMVGDPIPHPSNIEMPLDSYTFLTKHTLDMKYTYVDEKIYEFLGYMPEDLEGHSAYQLH 297
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKN--SKPDFVISTH 373
H D + +++ + G YRF GG+ W+QT + LVY N S+P V+ H
Sbjct: 298 HAQDNESILKSYKTMFTKGQIQTPPYRFLARHGGYAWVQTQATLVYGNRDSRPQAVVCVH 357
Query: 374 RPLME-EEGRDLL 385
L E E+G +L
Sbjct: 358 TCLSEIEDGDQIL 370
>gi|24654763|ref|NP_523872.2| trachealess, isoform A [Drosophila melanogaster]
gi|7291970|gb|AAF47386.1| trachealess, isoform A [Drosophila melanogaster]
Length = 958
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 373 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 432
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 433 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 492
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 493 ADEQNIICVNYVISNRENENMI 514
>gi|296198859|ref|XP_002746908.1| PREDICTED: single-minded homolog 1 [Callithrix jacchus]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|2245352|gb|AAB62395.1| hSIM1 [Homo sapiens]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|355748775|gb|EHH53258.1| hypothetical protein EGM_13864 [Macaca fascicularis]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|440900235|gb|ELR51420.1| Single-minded-like protein 1 [Bos grunniens mutus]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|125490345|ref|NP_001074957.1| single-minded homolog 1 [Pan troglodytes]
gi|146325729|sp|A2T6X9.1|SIM1_PANTR RecName: Full=Single-minded homolog 1
gi|124111115|gb|ABM91934.1| SIM1 [Pan troglodytes]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|351705699|gb|EHB08618.1| Single-minded-like protein 1 [Heterocephalus glaber]
Length = 754
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 196 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 255
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 256 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 315
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 316 VNYVLTDTEYKGL 328
>gi|296484106|tpg|DAA26221.1| TPA: single-minded homolog 1 [Bos taurus]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|227430297|ref|NP_001153057.1| single-minded homolog 1b [Danio rerio]
gi|226426422|gb|ACO54510.1| Sim1b long isoform [Danio rerio]
Length = 586
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 216 VGLVAVGHTLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVSDLTGYEPQDLIEKTLYH 275
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 276 HVHCCDSFHLRCAHHLLLVKGQVTTKYYRFLSKRGGWVWVQSYATIVHNSRSSRPHCIVS 335
Query: 372 THRPLMEEEGRDLL 385
+ L + E + L+
Sbjct: 336 VNYVLTDTEYKGLI 349
>gi|442629202|ref|NP_001261207.1| trachealess, isoform D [Drosophila melanogaster]
gi|391358202|sp|Q24119.4|TRH_DROME RecName: Full=Protein trachealess
gi|440215071|gb|AGB93902.1| trachealess, isoform D [Drosophila melanogaster]
Length = 1022
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 373 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 432
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 433 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 492
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 493 ADEQNIICVNYVISNRENENMI 514
>gi|146325728|sp|A1YFY6.1|SIM1_PANPA RecName: Full=Single-minded homolog 1
gi|121483834|gb|ABM54211.1| SIM1 [Pan paniscus]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|300794523|ref|NP_001179901.1| single-minded homolog 1 [Bos taurus]
Length = 766
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|442629206|ref|NP_001261209.1| trachealess, isoform F [Drosophila melanogaster]
gi|440215073|gb|AGB93904.1| trachealess, isoform F [Drosophila melanogaster]
Length = 989
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 245 QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDT 304
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS
Sbjct: 403 HSRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPE 462
Query: 305 ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YK 362
+L N Y L H +D + +H +L++ G YR GG+ WLQT + +V K
Sbjct: 463 DLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTK 522
Query: 363 NSKPDFVISTHRPLMEEEGRDLL 385
N+ +I + + E +++
Sbjct: 523 NADEQNIICVNYVISNRENENMI 545
>gi|297747308|ref|NP_001166056.2| single-minded homolog 1 [Sus scrofa]
gi|297655327|gb|ADC53306.2| single-minded 1 protein [Sus scrofa]
Length = 766
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|291396685|ref|XP_002714792.1| PREDICTED: single-minded homolog 1-like [Oryctolagus cuniculus]
Length = 766
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|320545371|ref|NP_001097461.2| trachealess, isoform C [Drosophila melanogaster]
gi|318069090|gb|ABW08426.2| trachealess, isoform C [Drosophila melanogaster]
Length = 966
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 245 QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDT 304
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS
Sbjct: 380 HSRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPE 439
Query: 305 ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YK 362
+L N Y L H +D + +H +L++ G YR GG+ WLQT + +V K
Sbjct: 440 DLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTK 499
Query: 363 NSKPDFVISTHRPLMEEEGRDLL 385
N+ +I + + E +++
Sbjct: 500 NADEQNIICVNYVISNRENENMI 522
>gi|37594329|gb|AAQ94179.1| Hif3a [Danio rerio]
Length = 626
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F ++H LDL+ D R L+GY +L ++
Sbjct: 209 LTLLCEPIPHPSSVEFPLDSSTFLTRHNLDLTYTQCDGRVTELVGYQPDDLIGRSAFEFF 268
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D +V+ + L G YRF T +GG+ W +T + ++Y + S+P+ V+ +
Sbjct: 269 HALDFDHVSRSLHILFSKGQVCTGQYRFLTKNGGFVWTETQATVLYNSRTSQPEAVVCLN 328
Query: 374 RPLMEEEGRDLL 385
L E +D++
Sbjct: 329 FILSGVEEQDVV 340
>gi|426234631|ref|XP_004011296.1| PREDICTED: single-minded homolog 1 [Ovis aries]
Length = 769
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 211 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 270
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 271 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 330
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 331 VNYVLTDTEYKGL 343
>gi|348557855|ref|XP_003464734.1| PREDICTED: hypoxia-inducible factor 3-alpha-like [Cavia porcellus]
Length = 667
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKPE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 158 APTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPSQTALAGSPSSEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 218 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF GG+ W QT + +V P + +I
Sbjct: 278 IHALDSDAVSRSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIICV 337
Query: 373 H 373
H
Sbjct: 338 H 338
>gi|332205528|gb|AEE36606.1| clock protein, partial [Carassius auratus]
Length = 263
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 251 EPPLALFAICTPFGPPSLLEIPHKEVM---FKSKHKLDLSLVSMDQRGKMLLGYSDTELA 307
E + L A P L ++ + E + F S+H L+ + +D R ++GY E+
Sbjct: 144 EEQICLIATVRLVTPQFLKDLCNVEDVCDEFTSRHSLEWKFLFLDHRASPIIGYLPFEVL 203
Query: 308 NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY 361
GYD H DDL +A H++L++ G YRF T W WLQT + Y
Sbjct: 204 GTSGYDYYHVDDLELIAQCHKQLMQCGKGKSCYYRFLTKGQQWIWLQTHYYITY 257
>gi|348560534|ref|XP_003466068.1| PREDICTED: single-minded homolog 1-like [Cavia porcellus]
Length = 767
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|195435564|ref|XP_002065750.1| GK20151 [Drosophila willistoni]
gi|194161835|gb|EDW76736.1| GK20151 [Drosophila willistoni]
Length = 996
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTEL 306
RK + P L + A+ PPS+ EI + MF ++ DL + + R LL Y+ +L
Sbjct: 375 RKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYAPEDL 434
Query: 307 ANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKNS 364
N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN+
Sbjct: 435 VNKSLYSLCHAEDANRLRKSHTDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNA 494
Query: 365 KPDFVISTHRPLMEEEGRDLL 385
+I + + E +L+
Sbjct: 495 DEQNIICVNYVISNRENENLI 515
>gi|395851422|ref|XP_003798255.1| PREDICTED: single-minded homolog 1 [Otolemur garnettii]
Length = 766
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|395854190|ref|XP_003799581.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Otolemur
garnettii]
Length = 600
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P + F S+H LD+ D+R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGQGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
+I H
Sbjct: 264 SIICVH 269
>gi|444725314|gb|ELW65884.1| Single-minded like protein 1 [Tupaia chinensis]
Length = 766
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|55730495|emb|CAH91969.1| hypothetical protein [Pongo abelii]
Length = 576
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|157819625|ref|NP_001100578.1| single-minded homolog 2 [Rattus norvegicus]
gi|149017724|gb|EDL76725.1| single-minded 2 (predicted) [Rattus norvegicus]
Length = 656
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHNNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEVEYKEL 340
>gi|164600783|gb|ABY61822.1| endothelial PAS domain protein 1 [Ovis aries]
Length = 142
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L L +C P PS ++IP F S+H +D+
Sbjct: 1 LHCTGQVKVYSNCPPHSSLCGCKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 60
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 61 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 120
Query: 347 DGGWQWLQTSSRLVY--KNSKP 366
GG+ WL+T ++Y +N +P
Sbjct: 121 HGGYVWLETQGTVIYNPRNLQP 142
>gi|2969893|emb|CAA05055.1| human SIM2 [Homo sapiens]
Length = 463
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 145 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 204
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 205 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 264
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 265 VNYVLTEIEYKEL 277
>gi|383856713|ref|XP_003703852.1| PREDICTED: uncharacterized protein LOC100878780 [Megachile
rotundata]
Length = 749
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ SL EI + MF + LD+ L+ +D L GY+ T+L Y
Sbjct: 284 IGLLAVGHSLPGRSLTEIKLYQNMFMFRASLDMKLIFVDGSVSQLTGYNPTDLIEKTLYH 343
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ + AH LL+ G YRF GGW W+Q+ +V+ ++S+P ++S
Sbjct: 344 YVHGCDMWQLCHAHYLLLRKGQVITGYYRFLAKCGGWVWMQSYVTIVHNSRSSRPHCIVS 403
Query: 372 THRPLMEEEGRDLL 385
+ L + E +L+
Sbjct: 404 VNYVLSKPEHTELV 417
>gi|355747376|gb|EHH51873.1| Class E basic helix-loop-helix protein 15, partial [Macaca
fascicularis]
Length = 525
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|355560292|gb|EHH16978.1| Class E basic helix-loop-helix protein 15, partial [Macaca mulatta]
Length = 525
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|432898437|ref|XP_004076501.1| PREDICTED: single-minded homolog 2-like [Oryzias latipes]
Length = 683
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P + EI MF + LDL L+ +D + L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSGITEIKLHSNMFMFRASLDLKLIFLDMKVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHTCDVFHLRYAHHLLLVKGQVTTKYYRLLSKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDVECKEL 340
>gi|395529671|ref|XP_003766932.1| PREDICTED: hypoxia-inducible factor 3-alpha [Sarcophilus harrisii]
Length = 1015
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 102/251 (40%), Gaps = 50/251 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E V++P+
Sbjct: 428 EGDMAYLSENVSKHLG-----LSQLELIGHSVFDFVHPCDQEELQDVLTPRQGLSKKKME 482
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R EPPL
Sbjct: 483 APTERSFSLRMKSTLTSRGRTLNLKAATWKVLHCTGHMRAYSPPSESSAGGAPGPEPPLR 542
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC PS LE P F S+H LD+ D+R + GY +L Y+
Sbjct: 543 CLVLICEAIPHPSSLEPPLGRGAFLSRHTLDMKFTYCDERISEVAGYCPDDLIGCSAYEY 602
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIST 372
+H D V+ + LL G + YRF +GG+ W QT + ++ + +P+ V+
Sbjct: 603 IHALDSDAVSKSIHTLLSKGQAVTGQYRFLARNGGYLWTQTQATVISGGRGPQPESVVCV 662
Query: 373 HRPL--MEEEG 381
H L +EE G
Sbjct: 663 HFVLSRVEETG 673
>gi|195375355|ref|XP_002046467.1| GJ12482 [Drosophila virilis]
gi|194153625|gb|EDW68809.1| GJ12482 [Drosophila virilis]
Length = 992
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTEL 306
RK + P L + A+ PPS+ EI + MF ++ DL + + R LL Y+ +L
Sbjct: 371 RKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYTPEDL 430
Query: 307 ANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV--YKNS 364
N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN+
Sbjct: 431 VNKSLYSLCHAEDANRLRKSHTDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNA 490
Query: 365 KPDFVISTHRPLMEEEGRDLL 385
+I + + E +L+
Sbjct: 491 DEQNIICVNYVISNRENENLI 511
>gi|296234167|ref|XP_002762300.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Callithrix
jacchus]
Length = 670
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 214 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 273
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V + S+ +
Sbjct: 274 SAYEYIHALDFDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGSQSE 333
Query: 368 FVISTH 373
+I H
Sbjct: 334 SIICVH 339
>gi|255693991|gb|ACU30154.1| hypoxia inducible factor 1 alpha [Litopenaeus vannamei]
Length = 1050
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 238 RIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKM 297
++ + G+ + EE L A+ TP PS +E P + F SKH LD+ +D
Sbjct: 216 KVVQVSGEVVQHEEDQAWLVALGTPVPHPSNIEFPLDKQTFVSKHSLDMKFTYVDDNVGE 275
Query: 298 LLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSS 357
GY EL Y++ H D V A++ L G YRF GG+ WL T +
Sbjct: 276 FCGYGPKELVGRSLYEMHHALDSELVKEAYKTLRSKGQVETGQYRFLARGGGYVWLVTQA 335
Query: 358 RLVY--KNSKPDFVI 370
L++ K+ KP +V+
Sbjct: 336 TLIHGPKDHKPQYVV 350
>gi|296234169|ref|XP_002762301.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Callithrix
jacchus]
Length = 668
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 212 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 271
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V + S+ +
Sbjct: 272 SAYEYIHALDFDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGSQSE 331
Query: 368 FVISTH 373
+I H
Sbjct: 332 SIICVH 337
>gi|403271535|ref|XP_003927678.1| PREDICTED: single-minded homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403271537|ref|XP_003927679.1| PREDICTED: single-minded homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 563
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|395854188|ref|XP_003799580.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Otolemur
garnettii]
Length = 666
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P + F S+H LD+ D+R + GYS +L
Sbjct: 210 EPPLQCLVLICEAIPHPGSLEPPLGQGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 269
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 270 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 329
Query: 368 FVISTH 373
+I H
Sbjct: 330 SIICVH 335
>gi|328712552|ref|XP_001949586.2| PREDICTED: protein trachealess-like [Acyrthosiphon pisum]
Length = 964
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L R R + NRK P L ++ PPS+ EI + MF ++ D + +
Sbjct: 253 LICRLRPQYTFSHNRKCAPPLLGAVSLAIALPPPSVHEIRLETDMFVTRLYFDFRIAHCE 312
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
R +L Y+ EL M Y L H +D+ + H +L+ G YR +GG+ W
Sbjct: 313 PRVAEILDYTADELTGMNMYTLCHGEDVGKLRKCHLDLINKGQMMTHYYRVMNKNGGYTW 372
Query: 353 LQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
+QT +V KN++ +I + + E +L+
Sbjct: 373 MQTCGTVVCNSKNAEEQNIICVNYVVSAREFDNLI 407
>gi|114684078|ref|XP_001169453.1| PREDICTED: single-minded homolog 2 isoform 2 [Pan troglodytes]
Length = 667
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|281353701|gb|EFB29285.1| hypothetical protein PANDA_012188 [Ailuropoda melanoleuca]
Length = 603
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 93/241 (38%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 96 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPQQSLSKKKPE 150
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 151 APTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPLAQTSPAGSPNLEPPLQ 210
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 211 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 270
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V + LL G + YRF GG+ W QT + +V P + ++
Sbjct: 271 IHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRAPQSESIVCV 330
Query: 373 H 373
H
Sbjct: 331 H 331
>gi|325513895|gb|ADZ23996.1| hypoxia-inducible factor 3a [Myxocyprinus asiaticus]
Length = 632
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L G I+ L ++ L +C P PS +E P F ++H +DL+ D
Sbjct: 190 LHCTGHIQTLSSEDESSTPGGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHNMDLTFTQCD 249
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
R L+GY +L Y+ H D +V S+ L G YRF +GG+ W
Sbjct: 250 GRVTELVGYEPDDLIGRSAYEFYHALDFDHVTSSLHILFSKGQVCTSHYRFLAKNGGFVW 309
Query: 353 LQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
+T + ++Y + S+P+ V+ + L E D++
Sbjct: 310 TETQATVLYNSRTSQPEAVVCLNFILSGVEQADVV 344
>gi|281338859|gb|EFB14443.1| hypothetical protein PANDA_005294 [Ailuropoda melanoleuca]
Length = 525
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDIEYKEL 340
>gi|403299069|ref|XP_003940314.1| PREDICTED: hypoxia-inducible factor 3-alpha [Saimiri boliviensis
boliviensis]
Length = 633
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 214 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 273
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V + S+ +
Sbjct: 274 SAYEYIHALDFDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGSQSE 333
Query: 368 FVISTH 373
+I H
Sbjct: 334 SIICVH 339
>gi|4827004|ref|NP_005060.1| single-minded homolog 2 long isoform [Homo sapiens]
gi|2851630|sp|Q14190.2|SIM2_HUMAN RecName: Full=Single-minded homolog 2; AltName: Full=Class E basic
helix-loop-helix protein 15; Short=bHLHe15
gi|2062417|gb|AAB62396.1| transcription factor SIM2 long form [Homo sapiens]
gi|6712195|dbj|BAA89433.1| single-minded 2 protein [Homo sapiens]
gi|119630143|gb|EAX09738.1| single-minded homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 667
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|402862419|ref|XP_003895560.1| PREDICTED: single-minded homolog 2 [Papio anubis]
Length = 667
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|397507000|ref|XP_003824000.1| PREDICTED: single-minded homolog 2 [Pan paniscus]
Length = 570
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|74190472|dbj|BAE25907.1| unnamed protein product [Mus musculus]
Length = 470
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P+ LE P F S+H LD+ D+R + GYS +L
Sbjct: 19 EPPLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 78
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 79 SAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSE 138
Query: 368 FVISTH 373
+I H
Sbjct: 139 SIICVH 144
>gi|348541225|ref|XP_003458087.1| PREDICTED: hypothetical protein LOC100710360 [Oreochromis
niloticus]
Length = 1036
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P + EI MF + LD L+ +D R L GY +L + Y
Sbjct: 208 VGLVAVGHSLPPSGITEIKLHSNMFMFRASLDFKLIFLDMRVAELTGYEPQDLIDKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHACDIFHLRYAHHLLLVKGQVTTKYYRLLSKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDIERKEL 340
>gi|301775376|ref|XP_002923099.1| PREDICTED: hypoxia-inducible factor 3-alpha-like [Ailuropoda
melanoleuca]
Length = 670
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 93/241 (38%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 104 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPQQSLSKKKPE 158
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 159 APTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPLAQTSPAGSPNLEPPLQ 218
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 219 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 278
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V + LL G + YRF GG+ W QT + +V P + ++
Sbjct: 279 IHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRAPQSESIVCV 338
Query: 373 H 373
H
Sbjct: 339 H 339
>gi|350592162|ref|XP_003358999.2| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2-like [Sus
scrofa]
Length = 626
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 162 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 221
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 222 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSCATVVHNSRSSRPHCIVS 281
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 282 VNYVLTDIEYKEL 294
>gi|345795277|ref|XP_849519.2| PREDICTED: single-minded homolog 2 isoform 1 [Canis lupus
familiaris]
Length = 559
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDIEYKEL 340
>gi|251823727|ref|NP_001156422.1| hypoxia-inducible factor 3-alpha isoform 1 [Mus musculus]
Length = 664
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 158 APTERHFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P+ LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 218 CLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF GG+ W QT + +V P + +I
Sbjct: 278 IHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIICV 337
Query: 373 H 373
H
Sbjct: 338 H 338
>gi|3859464|gb|AAC72734.1| hypoxia inducible factor three alpha [Mus musculus]
Length = 662
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 101 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLE 155
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 156 APTERHFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQ 215
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P+ LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 216 CLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 275
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF GG+ W QT + +V P + +I
Sbjct: 276 IHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIICV 335
Query: 373 H 373
H
Sbjct: 336 H 336
>gi|348556425|ref|XP_003464022.1| PREDICTED: single-minded homolog 2-like [Cavia porcellus]
Length = 662
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E +DL
Sbjct: 328 VNYVLTDVEYKDL 340
>gi|148671804|gb|EDL03751.1| single-minded homolog 2 (Drosophila) [Mus musculus]
Length = 657
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPQCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDVEYKEL 340
>gi|407316776|gb|AFU07570.1| hypoxia-inducible factor 3 alpha subunit [Polypterus senegalus]
Length = 627
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G ++ H + +E P L IC P PS ++ P F+S+H +DL
Sbjct: 182 LQCSGHLRTYHTEEDSTKEGFTQIPLTCLTLICEPVPQPSTIDFPLDSRTFQSRHTMDLK 241
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
+ R LLGY +L Y+ H D ++ + LL G YRF +
Sbjct: 242 YTHCEDRVFELLGYQPEDLIGRSAYEYHHALDSDHITKSFHILLSKGQMSTGHYRFLAKN 301
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVI 370
GG+ W +T + ++Y K+S+P+ VI
Sbjct: 302 GGFAWAETCATVLYNRKSSQPEGVI 326
>gi|344269355|ref|XP_003406518.1| PREDICTED: hypoxia-inducible factor 3-alpha [Loxodonta africana]
Length = 670
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 93/237 (39%), Gaps = 44/237 (18%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 153 EGDMAYLSENVSKHLG-----LSQLELIGHSVFDFIHPCDQEELQDALTPRQSLSKKKLE 207
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE---------EPPL-ALFA 258
P++R L RGR K+LH G R + EPPL L
Sbjct: 208 APTQRCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPDLEPPLRCLVL 267
Query: 259 ICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYD 318
IC P LE P F S+H LD+ D+R + GYS +L Y +H
Sbjct: 268 ICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPEDLIGCSAYKYIHAL 327
Query: 319 DLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVISTH 373
D V+ + LL G + YRF GG+ W QT + +V P + ++ H
Sbjct: 328 DSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRAPQSESIVCIH 384
>gi|410970001|ref|XP_003991479.1| PREDICTED: single-minded homolog 2 [Felis catus]
Length = 548
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDIEYKEL 340
>gi|170295859|ref|NP_058564.2| hypoxia-inducible factor 3-alpha isoform 2 [Mus musculus]
gi|341940802|sp|Q0VBL6.2|HIF3A_MOUSE RecName: Full=Hypoxia-inducible factor 3-alpha; Short=HIF-3-alpha;
Short=HIF3-alpha; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP7; AltName:
Full=HIF3-alpha-1; AltName: Full=Inhibitory PAS domain
protein; Short=IPAS; AltName: Full=Member of PAS protein
7
Length = 662
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 101 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLE 155
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 156 APTERHFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQ 215
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P+ LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 216 CLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 275
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF GG+ W QT + +V P + +I
Sbjct: 276 IHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIICV 335
Query: 373 H 373
H
Sbjct: 336 H 336
>gi|111306675|gb|AAI20588.1| Hypoxia inducible factor 3, alpha subunit [Mus musculus]
Length = 662
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 101 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLE 155
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 156 APTERHFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQ 215
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P+ LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 216 CLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 275
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF GG+ W QT + +V P + +I
Sbjct: 276 IHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIICV 335
Query: 373 H 373
H
Sbjct: 336 H 336
>gi|194239684|ref|NP_033664.2| single-minded homolog 2 short isoform [Homo sapiens]
gi|83405489|gb|AAI10445.1| Single-minded homolog 2 (Drosophila) [Homo sapiens]
gi|119630142|gb|EAX09737.1| single-minded homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 570
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|121581812|dbj|BAF44519.1| hypoxia inducible factor 3 alpha [Mus musculus]
Length = 664
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 158 APTERHFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P+ LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 218 CLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF GG+ W QT + +V P + +I
Sbjct: 278 IHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIICV 337
Query: 373 H 373
H
Sbjct: 338 H 338
>gi|355703683|gb|EHH30174.1| hypothetical protein EGK_10787 [Macaca mulatta]
Length = 669
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 158 APTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPTGSPDSEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D R + GYS +L Y+
Sbjct: 218 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF +GG+ W QT + +V P + ++
Sbjct: 278 IHALDSDAVSKSIHTLLSKGQAVTGQYRFLARNGGYLWTQTQATVVSGGRGPQSESIVCV 337
Query: 373 H 373
H
Sbjct: 338 H 338
>gi|2062419|gb|AAB62397.1| transcription factor SIM2 short form [Homo sapiens]
Length = 570
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|440907533|gb|ELR57674.1| Hypoxia-inducible factor 3-alpha, partial [Bos grunniens mutus]
Length = 660
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 49/241 (20%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG N + +E ++P+ + E
Sbjct: 95 EGDMAYLSENVSKHLG-----LSQLELIGHNIFDFIHPCDQEELQDALTPRQLSKKKPE- 148
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 149 APTERCFSLRMKSTLSSRGRTLNLKAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEPPLQ 208
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 209 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 268
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V + LL G + YRF GG+ W QT + +V P + ++
Sbjct: 269 IHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCV 328
Query: 373 H 373
H
Sbjct: 329 H 329
>gi|6650272|gb|AAF21782.1| hypoxia-inducible factor 3 alpha [Mus musculus]
Length = 630
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 101 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLE 155
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 156 APTERHFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQ 215
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P+ LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 216 CLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 275
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF GG+ W QT + +V P + +I
Sbjct: 276 IHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSESIICV 335
Query: 373 H 373
H
Sbjct: 336 H 336
>gi|1389638|dbj|BAA09700.1| mSim [Mus musculus]
gi|1586925|prf||2205234A Ah receptor nuclear translocator
Length = 657
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIERTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDVEYKEL 340
>gi|2599383|gb|AAB84099.1| single-minded 2 protein [Mus musculus]
Length = 657
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIERTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDVEYKEL 340
>gi|11968112|ref|NP_071973.1| hypoxia-inducible factor 3-alpha [Rattus norvegicus]
gi|81917470|sp|Q9JHS2.1|HIF3A_RAT RecName: Full=Hypoxia-inducible factor 3-alpha; Short=HIF-3-alpha;
Short=HIF3-alpha; AltName: Full=HIF3-alpha-1
gi|8953575|emb|CAB96611.1| hypoxia inducible factor 3 alpha [Rattus norvegicus]
Length = 662
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P+ LE P F S+H LD+ D+R + GYS +L
Sbjct: 211 EPPLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 271 SAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSE 330
Query: 368 FVISTH 373
+I H
Sbjct: 331 SIICVH 336
>gi|195135202|ref|XP_002012023.1| GI16736 [Drosophila mojavensis]
gi|193918287|gb|EDW17154.1| GI16736 [Drosophila mojavensis]
Length = 985
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTEL 306
RK + P L + A+ PPS+ EI + MF ++ DL + + R LL Y+ +L
Sbjct: 368 RKAQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYTPEDL 427
Query: 307 ANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNS 364
N Y L H +D + +H +L++ G YR +GG+ WLQT + +V KN+
Sbjct: 428 VNKSLYCLCHAEDANRLRKSHTDLIEKGQVLTGYYRLMNKNGGYTWLQTCATVVCSTKNA 487
Query: 365 KPDFVISTHRPLMEEEGRDLL 385
+I + + E +L+
Sbjct: 488 DEQNIICVNYVISNREYENLI 508
>gi|338710541|ref|XP_001500830.3| PREDICTED: hypoxia-inducible factor 3-alpha [Equus caballus]
Length = 588
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D+R + GYS +L
Sbjct: 133 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 192
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V + LL G + YRF GG+ W QT + +V P +
Sbjct: 193 SAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 252
Query: 368 FVISTH 373
++ H
Sbjct: 253 SIVCVH 258
>gi|149056848|gb|EDM08279.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_a [Rattus
norvegicus]
Length = 627
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P+ LE P F S+H LD+ D+R + GYS +L
Sbjct: 211 EPPLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 271 SAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSE 330
Query: 368 FVISTH 373
+I H
Sbjct: 331 SIICVH 336
>gi|119226237|ref|NP_035507.2| single-minded homolog 2 [Mus musculus]
gi|2498016|sp|Q61079.1|SIM2_MOUSE RecName: Full=Single-minded homolog 2; AltName: Full=SIM
transcription factor; Short=mSIM
gi|1377818|gb|AAB19098.1| sim transcription factor [Mus musculus]
gi|1754613|dbj|BAA11013.1| Sim2 [Mus musculus]
Length = 657
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDVEYKEL 340
>gi|355755960|gb|EHH59707.1| hypothetical protein EGM_09889, partial [Macaca fascicularis]
Length = 665
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 158 APTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPDSEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D R + GYS +L Y+
Sbjct: 218 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF +GG+ W QT + +V P + ++
Sbjct: 278 IHALDSDAVSKSIHTLLTKGQAVTGQYRFLARNGGYLWTQTQATVVSGGRGPQSESIVCV 337
Query: 373 H 373
H
Sbjct: 338 H 338
>gi|56785781|gb|AAW29028.1| hypoxia-inducible factor 4 alpha [Epinephelus coioides]
Length = 674
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 259 ICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYD 318
+C P PS +E P F ++H +DL + R L+GY +L Y+ H
Sbjct: 220 LCEPIPHPSSVEFPLGTCTFLTRHSMDLCFTHCEGRVTELVGYKPEDLIGRSAYEFHHAL 279
Query: 319 DLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTHRPL 376
D +V + LL G YRF N GG+ W +T + ++Y K SKP V+ + L
Sbjct: 280 DSDHVNKSLHTLLSKGQVSTRHYRFLANSGGFVWAETQATVLYSSKMSKPKAVVCLNFVL 339
Query: 377 MEEEGRDLL 385
E D++
Sbjct: 340 SAVEQADVV 348
>gi|426243045|ref|XP_004015376.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Ovis aries]
Length = 609
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D+R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|410982678|ref|XP_003997675.1| PREDICTED: hypoxia-inducible factor 3-alpha [Felis catus]
Length = 600
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D+R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|397493293|ref|XP_003817543.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Pan
paniscus]
Length = 600
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P +F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGVFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|345326320|ref|XP_001512322.2| PREDICTED: single-minded homolog 2-like [Ornithorhynchus anatinus]
Length = 849
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 272 VGLVAVGQSLPPSAVTEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 331
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D Y+ AH LL G YR GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 332 HVHGCDAFYLRYAHHLLLVKGQVTTKYYRLLAKRGGWLWVQSCATIVHNSRSSRPHCIVS 391
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 392 VNYVLTDVEYKEL 404
>gi|297277407|ref|XP_001108464.2| PREDICTED: hypoxia-inducible factor 3-alpha-like isoform 1 [Macaca
mulatta]
Length = 669
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 94/240 (39%), Gaps = 48/240 (20%)
Query: 177 GHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNENG 228
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 104 GDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPQQNLSRRKVEA 158
Query: 229 PSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL-A 255
P+ER L RGR K+LH G R + EPPL
Sbjct: 159 PTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPDSEPPLQC 218
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L IC P LE P F S+H LD+ D R + GYS +L Y+ +
Sbjct: 219 LVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEYI 278
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVISTH 373
H D V+ + LL G + YRF +GG+ W QT + +V P + ++ H
Sbjct: 279 HALDSDAVSKSIHTLLSKGQAVTGQYRFLARNGGYLWTQTQATVVSGGRGPQSESIVCVH 338
>gi|332229288|ref|XP_003263823.1| PREDICTED: single-minded homolog 2 [Nomascus leucogenys]
Length = 538
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|402906004|ref|XP_003915797.1| PREDICTED: hypoxia-inducible factor 3-alpha [Papio anubis]
Length = 632
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 158 APTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPDSEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D R + GYS +L Y+
Sbjct: 218 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF +GG+ W QT + +V P + ++
Sbjct: 278 IHALDSDAVSKSIHTLLSKGQAVTGQYRFLARNGGYLWTQTQATVVSGGRGPQSESIVCV 337
Query: 373 H 373
H
Sbjct: 338 H 338
>gi|443732750|gb|ELU17358.1| hypothetical protein CAPTEDRAFT_72408, partial [Capitella teleta]
Length = 370
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++P L+ + I P P+ +E+P F S+H L++ D R LL YS +EL
Sbjct: 210 DDPSLSSIMVIAEPIPHPANIEVPLDSRTFLSRHSLNMKFTYCDDRVDDLLHYSGSELVG 269
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + A + L G + YRF DGG+ W++T + ++Y + KP
Sbjct: 270 RSMYEYQHALDTDNLDKAFKTLFSKGQTVTGKYRFLAKDGGYAWVETQATVIYDTRTEKP 329
Query: 367 DFVISTHRPL--MEEEG 381
V+ + L +EE+G
Sbjct: 330 QCVVCVNFVLSGIEEKG 346
>gi|440892235|gb|ELR45515.1| Single-minded-like protein 2, partial [Bos grunniens mutus]
Length = 538
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDIEYKEL 340
>gi|332205530|gb|AEE36607.1| clock protein [Gadus morhua]
Length = 261
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 172 FTSRHSLEWKFLFLDHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKHLMQLGKGK 231
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVY 361
YRF T W WLQT + Y
Sbjct: 232 SCYYRFLTKGQQWIWLQTHYYITY 255
>gi|426243043|ref|XP_004015375.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Ovis aries]
Length = 678
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 92/241 (38%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG N + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHNIFDFIHPCDQEELQDALTPRQSLSKKKPE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ R L RGR K+LH G R + EPPL
Sbjct: 158 APTGRCFSLRMKSTLSSRGRTLNLKAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D+R + GYS +L Y+
Sbjct: 218 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V + LL G + YRF GG+ W QT + +V P + ++
Sbjct: 278 IHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCV 337
Query: 373 H 373
H
Sbjct: 338 H 338
>gi|345489461|ref|XP_001605010.2| PREDICTED: hypothetical protein LOC100121394 [Nasonia vitripennis]
Length = 989
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 251 EPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG 310
EP ++L + +P PS +EIP + F SKH L++ D + LG+ EL
Sbjct: 218 EPGVSLVVVASPVPHPSNIEIPLGKYTFLSKHNLNMKFTYADDKLAEFLGWESNELMGQS 277
Query: 311 GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY 361
+D H D + + + + L G +AYRF GG+ W+ T + L++
Sbjct: 278 VFDFHHALDNSSLDKSFKSLFHKGQCETMAYRFLNKKGGYAWVVTQATLIH 328
>gi|297277409|ref|XP_002801349.1| PREDICTED: hypoxia-inducible factor 3-alpha-like isoform 2 [Macaca
mulatta]
Length = 667
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 94/240 (39%), Gaps = 48/240 (20%)
Query: 177 GHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNENG 228
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 102 GDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPQQNLSRRKVEA 156
Query: 229 PSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL-A 255
P+ER L RGR K+LH G R + EPPL
Sbjct: 157 PTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPDSEPPLQC 216
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L IC P LE P F S+H LD+ D R + GYS +L Y+ +
Sbjct: 217 LVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEYI 276
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVISTH 373
H D V+ + LL G + YRF +GG+ W QT + +V P + ++ H
Sbjct: 277 HALDSDAVSKSIHTLLSKGQAVTGQYRFLARNGGYLWTQTQATVVSGGRGPQSESIVCVH 336
>gi|284924950|dbj|BAI67740.1| clock [Bactrocera cucurbitae]
Length = 312
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL++ G
Sbjct: 235 FISKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELMQKGECK 294
Query: 338 MIAYRFQTNDGGWQWLQT 355
YRF T W WLQT
Sbjct: 295 SCYYRFLTKGQQWIWLQT 312
>gi|431909193|gb|ELK12783.1| Hypoxia-inducible factor 3 alpha [Pteropus alecto]
Length = 678
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 97/251 (38%), Gaps = 50/251 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDHEELQDALTPQQSLSRKKPE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
PSER L RGR K+LH G R + EPPL
Sbjct: 158 APSERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRVYKPQVQTSPAGSPGGEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D+R + GYS +L Y
Sbjct: 218 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYKY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V + LL G + YRF GG+ W QT + +V P + ++
Sbjct: 278 IHALDSDAVGQSIHTLLSKGQAVTGRYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCV 337
Query: 373 H--RPLMEEEG 381
H L+EE G
Sbjct: 338 HFLISLVEETG 348
>gi|332257097|ref|XP_003277652.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Nomascus
leucogenys]
Length = 669
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 93/241 (38%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 103 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVE 157
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 158 APTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPDSEPPLQ 217
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D R + GYS +L Y+
Sbjct: 218 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEY 277
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF GG+ W QT + +V P + ++
Sbjct: 278 IHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCV 337
Query: 373 H 373
H
Sbjct: 338 H 338
>gi|260835180|ref|XP_002612587.1| hypothetical protein BRAFLDRAFT_265033 [Branchiostoma floridae]
gi|229297965|gb|EEN68596.1| hypothetical protein BRAFLDRAFT_265033 [Branchiostoma floridae]
Length = 333
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D + L GY +L Y
Sbjct: 209 IGLVAVGHSLPPSAITEIKLYSNMFMFRASLDLKLIFLDAKVAQLTGYEPQDLIEKTLYH 268
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ +H LL G YRF +GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 269 YVHGSDIFHLRYSHHLLLMKGQVTTKYYRFMAKNGGWVWIQSYATIVHNSRSSRPHCIVS 328
Query: 372 THRPL 376
+ L
Sbjct: 329 VNYVL 333
>gi|195066157|ref|XP_001996783.1| GH23748 [Drosophila grimshawi]
gi|193891620|gb|EDV90486.1| GH23748 [Drosophila grimshawi]
Length = 490
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 245 QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDT 304
RK + P L + A+ PPS+ EI + MF ++ DL + + R LL Y+
Sbjct: 343 HTRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRIAHCEPRVSDLLDYTPE 402
Query: 305 ELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNS 364
+L N Y L H +D + +H +L++ G YR GG+ WLQT + +V
Sbjct: 403 DLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTK 462
Query: 365 KPD 367
D
Sbjct: 463 NAD 465
>gi|295001556|gb|ADF58783.1| hypoxia-inducible factor 3 alpha subunit isoform 1 [Danio rerio]
Length = 626
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F ++H LDL+ D R L+GY +L ++
Sbjct: 209 LTLLCEPIPHPSSVEFPLDSSTFLTRHNLDLTYTQCDGRVTELVGYQPDDLIGRSAFEFF 268
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D +V+ + L G YRF +GG+ W +T + ++Y + S+P+ V+ +
Sbjct: 269 HALDFDHVSRSLHILFSKGQVCTGQYRFLAKNGGFVWTETQATVLYNSRTSQPEAVVCLN 328
Query: 374 RPLMEEEGRDLL 385
L E +D++
Sbjct: 329 FILSGVEEQDVV 340
>gi|431901494|gb|ELK08516.1| Single-minded like protein 2 [Pteropus alecto]
Length = 633
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDIEYKEL 340
>gi|444727378|gb|ELW67876.1| Single-minded like protein 2 [Tupaia chinensis]
Length = 908
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 484 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 543
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 544 HVHGCDVFHLRFAHHLLLVKGQVTTKYYRLLSKMGGWVWVQSYATVVHNSRSSRPHCIVS 603
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 604 VNYVLTDIEYKEL 616
>gi|332257099|ref|XP_003277653.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Nomascus
leucogenys]
Length = 667
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 93/241 (38%), Gaps = 48/241 (19%)
Query: 176 NGHINYPSQEIKKYNGDPLKSLAEMNTIGENKW--------KESPPVVSPKSYYQSYNEN 227
G + Y S+ + K+ G L+++ IG + + +E ++P+
Sbjct: 101 EGDMAYLSENVSKHLG-----LSQLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVE 155
Query: 228 GPSER---------LDIRGRI--------KILH--GQNRKLE-------------EPPL- 254
P+ER L RGR K+LH G R + EPPL
Sbjct: 156 APTERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPDSEPPLQ 215
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L IC P LE P F S+H LD+ D R + GYS +L Y+
Sbjct: 216 CLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEY 275
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--DFVIST 372
+H D V+ + LL G + YRF GG+ W QT + +V P + ++
Sbjct: 276 IHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCV 335
Query: 373 H 373
H
Sbjct: 336 H 336
>gi|332257105|ref|XP_003277656.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 5 [Nomascus
leucogenys]
Length = 621
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 162 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 221
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 222 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 281
Query: 368 FVISTH 373
++ H
Sbjct: 282 SIVCVH 287
>gi|397493291|ref|XP_003817542.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Pan
paniscus]
Length = 667
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P +F S+H LD+ D R + GYS +L
Sbjct: 211 EPPLQCLVLICEAIPHPGSLEPPLGRGVFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 271 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 330
Query: 368 FVISTH 373
++ H
Sbjct: 331 SIVCVH 336
>gi|397493289|ref|XP_003817541.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Pan
paniscus]
Length = 669
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P +F S+H LD+ D R + GYS +L
Sbjct: 213 EPPLQCLVLICEAIPHPGSLEPPLGRGVFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 272
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 273 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 332
Query: 368 FVISTH 373
++ H
Sbjct: 333 SIVCVH 338
>gi|157114229|ref|XP_001657997.1| hypoxia-inducible factor [Aedes aegypti]
gi|108883603|gb|EAT47828.1| AAEL001097-PA [Aedes aegypti]
Length = 357
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 240 KILH--GQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKM 297
K++H G E L A+ P PS +E+P F SKH LD+ +D +
Sbjct: 218 KVIHVTGHIACKENGQRQLVAVARPLPHPSNIEVPLDSSTFLSKHSLDMKFSYVDDKMYA 277
Query: 298 LLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSS 357
LLGY+ +L Y+ H D ++ + ++ G S YRF GG+ W+ T +
Sbjct: 278 LLGYNPADLMGKSLYECHHGIDSDHLMGTFKNVISKGQSETARYRFLARTGGYAWVVTQA 337
Query: 358 RLVYKNSKPDFVIST 372
L+Y KP ++
Sbjct: 338 TLIYDKQKPHSIVCV 352
>gi|332257103|ref|XP_003277655.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Nomascus
leucogenys]
Length = 459
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|332257101|ref|XP_003277654.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Nomascus
leucogenys]
Length = 600
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|332856288|ref|XP_001167499.2| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Pan
troglodytes]
Length = 600
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|41055377|ref|NP_956699.1| hypoxia-inducible factor 3-alpha [Danio rerio]
gi|32451899|gb|AAH54582.1| Hypoxia-inducible factor 1, alpha subunit, like [Danio rerio]
Length = 571
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F ++H LDL+ D R L+GY +L ++
Sbjct: 154 LTLLCEPIPHPSSVEFPLDSSTFLTRHNLDLTYTQCDGRVTELVGYQPDDLIGRSAFEFF 213
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D +V+ + L G YRF +GG+ W +T + ++Y + S+P+ V+ +
Sbjct: 214 HALDFDHVSRSLHILFSKGQVCTGQYRFLAKNGGFVWTETQATVLYNSRTSQPEAVVCLN 273
Query: 374 RPLMEEEGRDLL 385
L E +D++
Sbjct: 274 FILSGVEEQDVV 285
>gi|332856290|ref|XP_003316502.1| PREDICTED: hypoxia-inducible factor 3-alpha [Pan troglodytes]
Length = 450
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|119577817|gb|EAW57413.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_f [Homo
sapiens]
Length = 567
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|354491783|ref|XP_003508034.1| PREDICTED: single-minded homolog 2 [Cricetulus griseus]
gi|344256479|gb|EGW12583.1| Single-minded-like 2 [Cricetulus griseus]
Length = 538
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWGWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDIEYKEL 340
>gi|345785608|ref|XP_533636.3| PREDICTED: hypoxia-inducible factor 3-alpha [Canis lupus
familiaris]
Length = 639
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D+R + GYS +L
Sbjct: 213 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 272
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V + LL G + YRF GG+ W QT + +V P +
Sbjct: 273 SAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPHSE 332
Query: 368 FVISTH 373
++ H
Sbjct: 333 SIVCVH 338
>gi|23065541|ref|NP_690009.1| hypoxia-inducible factor 3-alpha isoform d [Homo sapiens]
gi|119577812|gb|EAW57408.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_a [Homo
sapiens]
Length = 450
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|194389168|dbj|BAG61601.1| unnamed protein product [Homo sapiens]
Length = 612
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 162 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 221
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 222 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 281
Query: 368 FVISTH 373
++ H
Sbjct: 282 SIVCVH 287
>gi|326807022|ref|NP_071907.4| hypoxia-inducible factor 3-alpha isoform b [Homo sapiens]
gi|194387600|dbj|BAG60164.1| unnamed protein product [Homo sapiens]
Length = 600
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|109065407|ref|XP_001085660.1| PREDICTED: single-minded homolog 2 [Macaca mulatta]
Length = 634
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>gi|426389308|ref|XP_004061065.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Gorilla
gorilla gorilla]
Length = 450
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|426389306|ref|XP_004061064.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Gorilla
gorilla gorilla]
Length = 600
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 144 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 203
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 204 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 263
Query: 368 FVISTH 373
++ H
Sbjct: 264 SIVCVH 269
>gi|40849967|gb|AAR95698.1| hypoxia-inducible factor-4alpha [Ctenopharyngodon idella]
Length = 643
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F ++H +DL+ D R L+GY +L Y+
Sbjct: 213 LTLLCEPIPHPSSVEFPLDSSTFLTRHSMDLTFTQCDGRVTELVGYQPDDLIGRSAYEFY 272
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D +V + L G YRF +GG+ W +T + ++Y + S+P+ V+ +
Sbjct: 273 HALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGFVWTETQATVLYNSRTSQPEAVVCLN 332
Query: 374 RPLMEEEGRDLL 385
L E D++
Sbjct: 333 FILSGVEEADVV 344
>gi|284924952|dbj|BAI67741.1| clock [Bactrocera cucurbitae]
Length = 312
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL++ G
Sbjct: 235 FTSKHSMEWKFLFLDHRVPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELMQKGECK 294
Query: 338 MIAYRFQTNDGGWQWLQT 355
YRF T W WLQT
Sbjct: 295 SCYYRFLTKGQQWIWLQT 312
>gi|407316786|gb|AFU07575.1| hypoxia-inducible factor 3 alpha subunit [Hypophthalmichthys
molitrix]
Length = 633
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F ++H +DL+ D R L+GY +L Y+
Sbjct: 206 LTLLCEPIPHPSSVEFPLDSSTFLTRHSMDLTFTQCDGRVTELVGYQPDDLIGRSAYEFY 265
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D +V + L G YRF +GG+ W +T + ++Y + S+P+ V+ +
Sbjct: 266 HALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGFVWTETQATVLYNSRTSQPEAVVCLN 325
Query: 374 RPLMEEEGRDLL 385
L E D++
Sbjct: 326 FILSGVEEADVV 337
>gi|407316788|gb|AFU07576.1| hypoxia-inducible factor 3 alpha subunit [Schizothorax prenanti]
Length = 628
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFA--ICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVS 290
L G ++ G EPP F +C P PS +E F ++H +DLS
Sbjct: 188 LHCTGHMQTFSGDGEN--EPPAGSFLTLLCEPIPHPSSVEFLLDSSTFLTRHNMDLSFTQ 245
Query: 291 MDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGW 350
D R L+GY +L Y+ H D +V + L G YRF +GG+
Sbjct: 246 CDGRVTELVGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGF 305
Query: 351 QWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
W +T + ++Y + S+P+ V+ + L E D++
Sbjct: 306 VWTETQATVLYNSRTSQPEAVVCLYFILSGVEEADVV 342
>gi|432090566|gb|ELK23982.1| Hypoxia-inducible factor 3-alpha [Myotis davidii]
Length = 523
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D+R + GYS +L
Sbjct: 77 EPPLQCLVLICEAIPHPDSLEPPLGRGAFLSRHSLDMKFTYCDERIADVAGYSPDDLIGC 136
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V + LL G + YRF GG+ W QT + +V P +
Sbjct: 137 SAYEYIHALDSDAVGRSIHTLLSKGQAVTGRYRFLARSGGYLWTQTQATVVSGGRGPQSE 196
Query: 368 FVISTH 373
++ H
Sbjct: 197 SIVCVH 202
>gi|195037395|ref|XP_001990146.1| GH19178 [Drosophila grimshawi]
gi|193894342|gb|EDV93208.1| GH19178 [Drosophila grimshawi]
Length = 1566
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 255 ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDL 314
L AI P PS +EIP F +KH LD+ +D + LLGYS +L ++
Sbjct: 288 VLIAIGRPIPHPSNIEIPLGTSTFLTKHGLDMKFTYVDDKMHSLLGYSPGDLLETSLFEC 347
Query: 315 VHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTH 373
H D + + + +L G YRF GG+ W+ T + +VY KP V+ +
Sbjct: 348 QHGADSERLMATFKSVLSKGQGETSRYRFLGKCGGYCWIVTQATIVYDKLKPQSVVCVN 406
>gi|407316778|gb|AFU07571.1| hypoxia-inducible factor 3 alpha subunit [Hypophthalmichthys
nobilis]
Length = 646
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F ++H +DL+ D R L+GY +L Y+
Sbjct: 213 LTLLCEPIPHPSSVEFPLDSSTFLTRHSMDLTFTQCDGRVTELVGYQPDDLIGRSAYEFY 272
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D +V + L G YRF +GG+ W +T + ++Y + S+P+ V+ +
Sbjct: 273 HALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGFVWTETQATVLYNSRTSQPEAVVCLN 332
Query: 374 RPLMEEEGRDLL 385
L E D++
Sbjct: 333 FILSGVEEADVV 344
>gi|1213281|gb|AAA91201.1| SIM1 [Mus musculus]
Length = 695
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 207 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 266
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+ ++S
Sbjct: 267 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRRHCIVS 326
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 327 VNYVLTDTEYKGL 339
>gi|2952266|gb|AAC05481.1| single-minded protein 1 [Mus musculus]
Length = 765
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+ ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRRHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>gi|114677981|ref|XP_001167523.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Pan
troglodytes]
Length = 667
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 211 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 271 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 330
Query: 368 FVISTH 373
++ H
Sbjct: 331 SIVCVH 336
>gi|407316792|gb|AFU07578.1| hypoxia-inducible factor 3 alpha subunit, partial [Lepisosteus
platostomus]
Length = 483
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L +C P PS +E P F S+H LDL D R L+GY +L Y+
Sbjct: 96 LTLLCEPIPHPSNVEFPLGSSTFLSRHSLDLKFTHCDGRVTELVGYKPEDLIGRSAYEYH 155
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVI 370
H D ++ + LL G YRF +GG+ W +T + ++Y K S+P+ V+
Sbjct: 156 HALDSDHLTKSLHTLLSKGQVTTSHYRFLAKNGGFVWAETQATVIYNGKTSQPEGVV 212
>gi|156394393|ref|XP_001636810.1| predicted protein [Nematostella vectensis]
gi|156223917|gb|EDO44747.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 238 RIKILHGQNRKLEEPPLALFAICTPFGPP--SLLEIPHKEVMFKSKHKLDLSLVSMDQRG 295
RIKIL + ++ LF ICTP S+LEI K +F +K+++DLS + +DQ+G
Sbjct: 145 RIKILDMTLPESDKREYGLFLICTPMETMTNSILEIRLKTSLFCTKNRMDLSFMDIDQKG 204
Query: 296 KMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
+ LLGY ++A Y ++H+DD+ + H++
Sbjct: 205 RSLLGYHKRDIALQSSYCMIHFDDIPVLGLLHKD 238
>gi|426389304|ref|XP_004061063.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Gorilla
gorilla gorilla]
Length = 667
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 211 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 271 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 330
Query: 368 FVISTH 373
++ H
Sbjct: 331 SIVCVH 336
>gi|51874048|gb|AAH80551.1| Hypoxia inducible factor 3, alpha subunit [Homo sapiens]
Length = 669
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 213 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 272
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 273 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 332
Query: 368 FVISTH 373
++ H
Sbjct: 333 SIVCVH 338
>gi|90421311|ref|NP_690008.2| hypoxia-inducible factor 3-alpha isoform c [Homo sapiens]
gi|145558932|sp|Q9Y2N7.2|HIF3A_HUMAN RecName: Full=Hypoxia-inducible factor 3-alpha; Short=HIF-3-alpha;
Short=HIF3-alpha; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP7; AltName:
Full=Class E basic helix-loop-helix protein 17;
Short=bHLHe17; AltName: Full=HIF3-alpha-1; AltName:
Full=Inhibitory PAS domain protein; Short=IPAS; AltName:
Full=Member of PAS protein 7; AltName: Full=PAS
domain-containing protein 7
gi|261858714|dbj|BAI45879.1| hypoxia inducible factor 3, alpha subunit [synthetic construct]
Length = 669
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 213 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 272
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 273 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 332
Query: 368 FVISTH 373
++ H
Sbjct: 333 SIVCVH 338
>gi|119577813|gb|EAW57409.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_b [Homo
sapiens]
Length = 580
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 157 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 216
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 217 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 276
Query: 368 FVISTH 373
++ H
Sbjct: 277 SIVCVH 282
>gi|23065535|ref|NP_690007.1| hypoxia-inducible factor 3-alpha isoform a [Homo sapiens]
gi|4558637|gb|AAD22668.1|AC007193_2 Putative homolog of hypoxia inducible factor three alpha [Homo
sapiens]
gi|16040975|dbj|BAB69689.1| hypoxia-inducible factor-3 alpha [Homo sapiens]
gi|119577816|gb|EAW57412.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_e [Homo
sapiens]
Length = 667
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 211 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 271 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 330
Query: 368 FVISTH 373
++ H
Sbjct: 331 SIVCVH 336
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,053,041,570
Number of Sequences: 23463169
Number of extensions: 513105723
Number of successful extensions: 1465627
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 1345
Number of HSP's that attempted gapping in prelim test: 1459824
Number of HSP's gapped (non-prelim): 5862
length of query: 630
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 481
effective length of database: 8,863,183,186
effective search space: 4263191112466
effective search space used: 4263191112466
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)