Your job contains 1 sequence.
>psy8265
MHKIKEENQYRSRGELGRYLLRYHFVLTPLNSVINLITHAIYRPYYPEYQPYTVSNGFSL
PTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPYITLPLCSDLPQSHKLPSKSLNSKSLDG
LSSNDSSPVPSNHLVTPKVEDIKSESFNYSEVPRQTVLMWGSNPSRSPPASPILPNGHIN
YPSQEIKKYNGDPLKSLAEMNTIGENKWKESPPVVSPKSYYQSYNENGPSERLDIRGRIK
ILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLG
YSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLV
YKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQTLA
PSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPTPAPPIEYLTP
PDAVAAAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFHQYRPYYPEYQPYTVSNGFSL
PTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMW
NSFLPPESAGISLQECFLQENSYLLERSFT
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8265
(630 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0003513 - symbol:ss "spineless" species:7227 "Dros... 968 2.0e-97 1
ZFIN|ZDB-GENE-050922-1 - symbol:ahr1b "aryl hydrocarbon r... 441 3.7e-42 2
UNIPROTKB|I3LF82 - symbol:AHR "Uncharacterized protein" s... 441 1.0e-40 1
UNIPROTKB|E1BY63 - symbol:LOC100859347 "Uncharacterized p... 431 1.6e-40 1
UNIPROTKB|F1NWS4 - symbol:LOC100859347 "Uncharacterized p... 428 3.3e-40 1
UNIPROTKB|F1ML85 - symbol:AHR "Uncharacterized protein" s... 432 9.5e-40 1
UNIPROTKB|F1NLX8 - symbol:AHR "Uncharacterized protein" s... 430 1.5e-39 1
UNIPROTKB|E2QWU8 - symbol:AHR "Uncharacterized protein" s... 428 2.7e-39 1
RGD|2074 - symbol:Ahr "aryl hydrocarbon receptor" species... 421 7.6e-38 1
UNIPROTKB|G3V6M2 - symbol:Ahr "RCG61977, isoform CRA_b" s... 421 7.6e-38 1
UNIPROTKB|F1SEI6 - symbol:F1SEI6 "Uncharacterized protein... 402 1.9e-37 1
UNIPROTKB|I3L5U3 - symbol:I3L5U3 "Uncharacterized protein... 402 1.9e-37 1
UNIPROTKB|Q8R4S2 - symbol:Ahr "Aryl hydrocarbon receptor"... 415 8.8e-37 1
UNIPROTKB|Q8R4S4 - symbol:Ahr "Aryl hydrocarbon receptor"... 415 8.8e-37 1
UNIPROTKB|Q8R4S7 - symbol:Ahr "Aryl hydrocarbon receptor"... 410 4.7e-36 1
UNIPROTKB|Q8R4S5 - symbol:Ahr "Aryl hydrocarbon receptor"... 410 5.2e-36 1
UNIPROTKB|Q8R4S6 - symbol:Ahr "Aryl hydrocarbon receptor"... 407 1.2e-35 1
MGI|MGI:105043 - symbol:Ahr "aryl-hydrocarbon receptor" s... 407 1.2e-35 1
UNIPROTKB|P35869 - symbol:AHR "Aryl hydrocarbon receptor"... 406 1.6e-35 1
ZFIN|ZDB-GENE-990714-16 - symbol:ahr2 "aryl hydrocarbon r... 385 9.6e-33 1
ZFIN|ZDB-GENE-020531-2 - symbol:ahr1a "aryl hydrocarbon r... 364 1.5e-30 1
UNIPROTKB|E1C4K6 - symbol:LOC424033 "Uncharacterized prot... 347 1.1e-28 1
WB|WBGene00000096 - symbol:ahr-1 species:6239 "Caenorhabd... 314 5.2e-25 2
UNIPROTKB|Q91YB0 - symbol:Clock "Circadian locomoter outp... 213 9.8e-14 1
UNIPROTKB|Q91YB2 - symbol:Clock "Circadian locomoter outp... 213 9.8e-14 1
UNIPROTKB|Q91YA8 - symbol:Clock "Circadian locomoter outp... 209 2.7e-13 1
ZFIN|ZDB-GENE-030408-2 - symbol:clock3 "clock homolog 3 (... 207 4.1e-13 1
UNIPROTKB|D4A4R8 - symbol:Clock "Circadian locomoter outp... 207 4.2e-13 1
UNIPROTKB|F1MLT7 - symbol:CLOCK "Uncharacterized protein"... 207 4.3e-13 1
UNIPROTKB|O15516 - symbol:CLOCK "Circadian locomoter outp... 207 4.3e-13 1
UNIPROTKB|Q5RAK8 - symbol:CLOCK "Circadian locomoter outp... 207 4.3e-13 1
UNIPROTKB|F1M012 - symbol:Clock "Circadian locomoter outp... 207 4.4e-13 1
RGD|620271 - symbol:Clock "clock circadian regulator" spe... 206 5.6e-13 1
UNIPROTKB|Q9WVS9 - symbol:Clock "Circadian locomoter outp... 206 5.6e-13 1
ZFIN|ZDB-GENE-060607-11 - symbol:epas1b "endothelial PAS ... 205 6.9e-13 1
UNIPROTKB|F1PSD8 - symbol:CLOCK "Uncharacterized protein"... 205 7.1e-13 1
MGI|MGI:99698 - symbol:Clock "circadian locomotor output ... 203 1.2e-12 1
UNIPROTKB|F1RVI1 - symbol:CLOCK "Uncharacterized protein"... 197 1.3e-12 1
UNIPROTKB|F1P5G3 - symbol:NPAS2 "Neuronal PAS domain-cont... 201 1.8e-12 1
UNIPROTKB|Q5ZQU2 - symbol:NPAS2 "Neuronal PAS domain-cont... 201 1.8e-12 1
UNIPROTKB|E1BZV0 - symbol:NPAS2 "Neuronal PAS domain-cont... 201 1.8e-12 1
ZFIN|ZDB-GENE-030408-3 - symbol:npas2 "neuronal PAS domai... 200 2.5e-12 1
UNIPROTKB|F1NKI9 - symbol:CLOCK "Circadian locomoter outp... 199 3.2e-12 1
UNIPROTKB|F1NKI8 - symbol:CLOCK "Circadian locomoter outp... 199 3.3e-12 1
UNIPROTKB|Q8QGQ6 - symbol:CLOCK "Circadian locomoter outp... 199 3.3e-12 1
UNIPROTKB|F1P1C0 - symbol:CLOCK "Circadian locomoter outp... 199 3.4e-12 1
ZFIN|ZDB-GENE-990630-14 - symbol:clock "clock" species:79... 199 3.4e-12 1
FB|FBgn0023076 - symbol:Clk "Clock" species:7227 "Drosoph... 207 4.7e-12 2
UNIPROTKB|F1NGR0 - symbol:F1NGR0 "Uncharacterized protein... 195 6.1e-12 1
UNIPROTKB|J9P4Q7 - symbol:NPAS2 "Uncharacterized protein"... 199 1.6e-11 2
UNIPROTKB|F6QL92 - symbol:NPAS2 "Uncharacterized protein"... 200 2.1e-11 2
UNIPROTKB|F1STF9 - symbol:NPAS2 "Uncharacterized protein"... 200 2.1e-11 2
UNIPROTKB|F1PPU8 - symbol:NPAS2 "Uncharacterized protein"... 199 3.0e-11 2
RGD|1309681 - symbol:Npas2 "neuronal PAS domain protein 2... 198 3.8e-11 2
UNIPROTKB|Q99743 - symbol:NPAS2 "Neuronal PAS domain-cont... 199 3.9e-11 2
UNIPROTKB|F5H027 - symbol:NPAS2 "Neuronal PAS domain-cont... 199 4.8e-11 2
MGI|MGI:109169 - symbol:Epas1 "endothelial PAS domain pro... 188 5.3e-11 1
RGD|68404 - symbol:Epas1 "endothelial PAS domain protein ... 188 5.3e-11 1
UNIPROTKB|Q9JHS1 - symbol:Epas1 "Endothelial PAS domain-c... 188 5.3e-11 1
UNIPROTKB|F1NJK2 - symbol:HIF1A "Hypoxia-inducible factor... 186 7.8e-11 1
UNIPROTKB|F1NQK5 - symbol:HIF1A "Hypoxia-inducible factor... 186 7.8e-11 1
UNIPROTKB|Q9YIB9 - symbol:HIF1A "Hypoxia-inducible factor... 186 7.8e-11 1
ZFIN|ZDB-GENE-030131-4490 - symbol:epas1a "endothelial PA... 186 8.2e-11 1
MGI|MGI:109232 - symbol:Npas2 "neuronal PAS domain protei... 193 1.3e-10 2
UNIPROTKB|F1NG41 - symbol:EPAS1 "Uncharacterized protein"... 184 1.4e-10 1
UNIPROTKB|F1S5K9 - symbol:EPAS1 "Uncharacterized protein"... 184 1.4e-10 1
UNIPROTKB|A5PJT1 - symbol:EPAS1 "Uncharacterized protein"... 184 1.4e-10 1
UNIPROTKB|Q0PGG7 - symbol:HIF1A "Hypoxia-inducible factor... 183 1.7e-10 1
ZFIN|ZDB-GENE-040426-706 - symbol:hif1ab "hypoxia-inducib... 192 1.9e-10 2
UNIPROTKB|A0JND0 - symbol:HIF1A "Hypoxia-inducible factor... 182 2.2e-10 1
UNIPROTKB|Q9XTA5 - symbol:HIF1A "Hypoxia-inducible factor... 182 2.2e-10 1
UNIPROTKB|Q52RL7 - symbol:Q52RL7 "Hypoxia inducible facto... 182 2.2e-10 1
UNIPROTKB|F8W9L0 - symbol:HIF1A "Hypoxia-inducible factor... 181 2.5e-10 1
UNIPROTKB|Q309Z6 - symbol:HIF1A "Hypoxia-inducible factor... 181 2.8e-10 1
UNIPROTKB|Q7YSE5 - symbol:Q7YSE5 "Hypoxia inducible facto... 181 2.8e-10 1
UNIPROTKB|Q64F54 - symbol:Q64F54 "Hypoxia-inducible facto... 181 2.8e-10 1
UNIPROTKB|F1PZ54 - symbol:HIF1A "Uncharacterized protein"... 181 2.8e-10 1
UNIPROTKB|F1SRU5 - symbol:HIF1A "Uncharacterized protein"... 181 2.8e-10 1
UNIPROTKB|Q6H8T3 - symbol:hif-1a "Hypoxia inducible facto... 181 2.8e-10 1
UNIPROTKB|Q16665 - symbol:HIF1A "Hypoxia-inducible factor... 181 2.8e-10 1
UNIPROTKB|A8MYV6 - symbol:HIF1A "Hypoxia-inducible factor... 181 2.8e-10 1
UNIPROTKB|F1LT63 - symbol:Hif1a "Hypoxia-inducible factor... 181 2.8e-10 1
UNIPROTKB|Q4ZH58 - symbol:Q4ZH58 "Hypoxia-inducible facto... 181 2.8e-10 1
UNIPROTKB|D4A8P8 - symbol:Hif1a "Hypoxia-inducible factor... 181 2.8e-10 1
MGI|MGI:106918 - symbol:Hif1a "hypoxia inducible factor 1... 181 2.8e-10 1
UNIPROTKB|E2QUK0 - symbol:EPAS1 "Uncharacterized protein"... 181 3.0e-10 1
UNIPROTKB|Q99814 - symbol:EPAS1 "Endothelial PAS domain-c... 181 3.0e-10 1
UNIPROTKB|Q9I8A9 - symbol:hif1a "Hypoxia-inducible factor... 179 4.5e-10 1
UNIPROTKB|Q4R658 - symbol:Q4R658 "Testis cDNA, clone: Qts... 177 7.6e-10 1
FB|FBgn0004666 - symbol:sim "single-minded" species:7227 ... 184 7.7e-10 3
RGD|61928 - symbol:Hif1a "hypoxia-inducible factor 1, alp... 176 9.8e-10 1
UNIPROTKB|O35800 - symbol:Hif1a "Hypoxia-inducible factor... 176 9.8e-10 1
ZFIN|ZDB-GENE-010803-1 - symbol:sim2 "single-minded homol... 166 7.1e-09 1
UNIPROTKB|E1BSJ1 - symbol:SIM2 "Uncharacterized protein" ... 161 1.4e-08 1
ZFIN|ZDB-GENE-040426-1315 - symbol:hif1al "hypoxia-induci... 163 1.7e-08 1
FB|FBgn0262139 - symbol:trh "trachealess" species:7227 "D... 165 2.0e-08 1
RGD|70332 - symbol:Hif3a "hypoxia inducible factor 3, alp... 160 3.9e-08 1
UNIPROTKB|Q9JHS2 - symbol:Hif3a "Hypoxia-inducible factor... 160 3.9e-08 1
ZFIN|ZDB-GENE-041210-5 - symbol:sim1b "single-minded homo... 159 4.2e-08 1
MGI|MGI:1859778 - symbol:Hif3a "hypoxia inducible factor ... 159 5.0e-08 1
WARNING: Descriptions of 67 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0003513 [details] [associations]
symbol:ss "spineless" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;IDA;NAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0007469 "antennal development" evidence=IEP]
[GO:0048800 "antennal morphogenesis" evidence=IMP] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0010092 "specification of organ
identity" evidence=IMP] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0036011 "imaginal disc-derived leg segmentation" evidence=IMP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
EMBL:AE014297 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 GO:GO:0048814 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0036011 GO:GO:0010092 GO:GO:0048800
RefSeq:NP_001163629.2 RefSeq:NP_001247140.1 UniGene:Dm.3249
ProteinModelPortal:E1JIM6 SMR:E1JIM6 GeneID:41988
KEGG:dme:Dmel_CG6993 CTD:41988 FlyBase:FBgn0003513 GenomeRNAi:41988
NextBio:826600 Bgee:E1JIM6 Uniprot:E1JIM6
Length = 1048
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 208/308 (67%), Positives = 222/308 (72%)
Query: 232 RLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSM 291
RLDIRGRIK+LHGQNRK EEPPLALFA CTPFGPPSLLEIPHKE MFKSKHKLD SLVSM
Sbjct: 225 RLDIRGRIKVLHGQNRKTEEPPLALFAYCTPFGPPSLLEIPHKENMFKSKHKLDFSLVSM 284
Query: 292 DQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQ 351
DQRGK +LGY+D EL NMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYR+Q DG WQ
Sbjct: 285 DQRGKHILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQ 344
Query: 352 WLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQ 411
WLQTSSRLVYKNSKPDFVI THR LM+EEG DLLGKRTMDFKVSYLD GL ++YFS++DQ
Sbjct: 345 WLQTSSRLVYKNSKPDFVICTHRQLMDEEGHDLLGKRTMDFKVSYLDTGLASTYFSEADQ 404
Query: 412 LTPSHQTLXXXXXXXXXXXXXXXXXRVNRRYKTQLRDFLSTCRTKRKMSAQHXXXXXXXX 471
L T R NRRYKTQLRDFLSTCR+KRK+ Q+
Sbjct: 405 LVVPPST----SPTAHALPPPVTPTRPNRRYKTQLRDFLSTCRSKRKLQQQNQPQTQQTS 460
Query: 472 -----------XXXIEYLTPPDA-VAAAYSN---MYTTG-Y-SATTPEYMSQSLYDNRL- 513
+EYL P A VAAAYSN MYTT Y SA YM S+ N
Sbjct: 461 PLGGQVGSPAPAVAVEYLPDPAAAVAAAYSNLNPMYTTSPYASAADNLYMGSSMPANAFY 520
Query: 514 PY-ENLFH 520
P ENLFH
Sbjct: 521 PVSENLFH 528
Score = 204 (76.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 42/78 (53%), Positives = 52/78 (66%)
Query: 554 LYCH-QTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGIS 612
L C + A + + Y +SDIVHQSVYELVHSEDREELQRQL+WNSFLP + + +
Sbjct: 133 LTCEGEVFFATHSIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQ 192
Query: 613 LQECFLQENSYLLERSFT 630
L E + + LERSFT
Sbjct: 193 LAETLAPDKALYLERSFT 210
>ZFIN|ZDB-GENE-050922-1 [details] [associations]
symbol:ahr1b "aryl hydrocarbon receptor 1b"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0042221 "response to chemical stimulus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-050922-1
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0042221
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
GeneTree:ENSGT00700000104038 HOVERGEN:HBG007313 KO:K09093
EMBL:BX908726 EMBL:CR394522 EMBL:DQ016494 IPI:IPI00498003
RefSeq:NP_001019987.1 UniGene:Dr.93042 STRING:Q4U3K9
Ensembl:ENSDART00000028787 GeneID:554265 KEGG:dre:554265 CTD:554265
InParanoid:Q4U3K9 OMA:HDNSKAT NextBio:20880738 Uniprot:Q4U3K9
Length = 940
Score = 441 (160.3 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 82/170 (48%), Positives = 120/170 (70%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQNR+L++ PP LALFAI TP PPS++EI K ++F++KHKLD +
Sbjct: 234 LNFQGRLKFLHGQNRRLDDGGQMPPQLALFAIATPLQPPSIMEIRTKNMIFRTKHKLDFT 293
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 294 PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK 353
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
D W+W+Q ++RLVYKN KPD++I+T RPL+EEEG + L KR+M ++
Sbjct: 354 DNRWKWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTF 403
Score = 41 (19.5 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 122 SSNDSSPVPSNHLVTPKVEDIKSESFNYSE 151
SS D P P+ LV + + E+ ++ E
Sbjct: 185 SSEDGDPAPNMSLVLCNPDQLPPENSSFLE 214
Score = 39 (18.8 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 79 TLTADQNSKGYSSPYITLPLCS 100
T T D + G +P ++L LC+
Sbjct: 180 TQTEDSSEDGDPAPNMSLVLCN 201
>UNIPROTKB|I3LF82 [details] [associations]
symbol:AHR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0006950 GO:GO:0004879 GO:GO:0043565 GO:GO:0003705
GO:GO:0000122 GO:GO:0044212 SMART:SM00086 GO:GO:0009410
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
OMA:QQLCQKM GO:GO:0045899 GO:GO:0030850 GO:GO:0030888 EMBL:FP102833
Ensembl:ENSSSCT00000031031 Uniprot:I3LF82
Length = 849
Score = 441 (160.3 bits), Expect = 1.0e-40, P = 1.0e-40
Identities = 105/272 (38%), Positives = 154/272 (56%)
Query: 150 SEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENKWK 209
+E RQ L W NPS+ P + + + SQ YN + L EN +
Sbjct: 167 AEFQRQ--LHWALNPSQCPDSGQRIDEA--SGLSQPAAYYNPEQLPP--------ENSFM 214
Query: 210 ESPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE----PP-LALFAICTPFG 264
E V + N +G ++ +GR+K LHGQN+K ++ PP LALFAI TP
Sbjct: 215 ERCFVCRLRCLLD--NSSG-FLAMNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQ 271
Query: 265 PPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYV 323
PPS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY +H D+ Y
Sbjct: 272 PPSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYC 331
Query: 324 ASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRD 383
A H ++KTG SGMI +R T D W W+Q+++RLVYKN +PD++I+T RPL +EEG++
Sbjct: 332 AEYHVRMIKTGESGMIVFRLLTKDNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGKE 391
Query: 384 LLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPS 415
L KRT+ K+ ++ A + + TP+
Sbjct: 392 HLRKRTL--KLPFMFATGEAVLYEITSPFTPT 421
>UNIPROTKB|E1BY63 [details] [associations]
symbol:LOC100859347 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AADN02034423 IPI:IPI00598982
Ensembl:ENSGALT00000006889 ArrayExpress:E1BY63 Uniprot:E1BY63
Length = 586
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 100/257 (38%), Positives = 149/257 (57%)
Query: 158 LMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENKWKESPPVVSP 217
L W NP +P P P G + S + Y D L + + + E V
Sbjct: 164 LHWALNPPHTPEGEPS-PEGMKSLSSPAVA-YRPDQLP-------LENSSFLERSFVCRF 214
Query: 218 KSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIP 272
+ N +G L+++GR++ LHGQN++ E+ PP LALFAI TP PPS+LEI
Sbjct: 215 RCLLD--NSSG-FLALNLQGRLRFLHGQNKRSEDGSALPPQLALFAISTPLQPPSILEIR 271
Query: 273 HKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELL 331
K ++F++KHKLD + ++ D +GK++LGY++ EL G GY +H D+ Y A H ++
Sbjct: 272 TKNMIFRTKHKLDFTPLACDAKGKIVLGYTEAELRMCGTGYQFIHAADMLYCAENHIRMM 331
Query: 332 KTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMD 391
KTG SG+ +R T D W+W+Q ++RLVYKNSKP+++I T RPL++EEG + L KR+M
Sbjct: 332 KTGESGLTVFRLLTKDKHWKWVQANARLVYKNSKPEYIIVTQRPLVDEEGGEHLRKRSMH 391
Query: 392 FKVSYL--DAGLNNSYF 406
++ +A L S F
Sbjct: 392 LPFTFATGEAVLYQSAF 408
>UNIPROTKB|F1NWS4 [details] [associations]
symbol:LOC100859347 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 OMA:SEGLIFY EMBL:AADN02034423
IPI:IPI00587681 Ensembl:ENSGALT00000006888 ArrayExpress:F1NWS4
Uniprot:F1NWS4
Length = 588
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 84/182 (46%), Positives = 125/182 (68%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+++GR++ LHGQN++ E+ PP LALFAI TP PPS+LEI K ++F++KHKLD +
Sbjct: 222 LNLQGRLRFLHGQNKRSEDGSALPPQLALFAISTPLQPPSILEIRTKNMIFRTKHKLDFT 281
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R T
Sbjct: 282 PLACDAKGKIVLGYTEAELRMCGTGYQFIHAADMLYCAENHIRMMKTGESGLTVFRLLTK 341
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYL--DAGLNNS 404
D W+W+Q ++RLVYKNSKP+++I T RPL++EEG + L KR+M ++ +A L S
Sbjct: 342 DKHWKWVQANARLVYKNSKPEYIIVTQRPLVDEEGGEHLRKRSMHLPFTFATGEAVLYQS 401
Query: 405 YF 406
F
Sbjct: 402 AF 403
>UNIPROTKB|F1ML85 [details] [associations]
symbol:AHR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0030888 "regulation of B cell proliferation"
evidence=IEA] [GO:0030850 "prostate gland development"
evidence=IEA] [GO:0009410 "response to xenobiotic stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006950 GO:GO:0004879
GO:GO:0043565 GO:GO:0003705 GO:GO:0000122 GO:GO:0044212
SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
GeneTree:ENSGT00700000104038 CTD:196 KO:K09093 OMA:QQLCQKM
GO:GO:0045899 GO:GO:0030850 GO:GO:0030888 EMBL:DAAA02010042
IPI:IPI00692346 RefSeq:NP_001192955.1 UniGene:Bt.13046 PRIDE:F1ML85
Ensembl:ENSBTAT00000010187 GeneID:280714 KEGG:bta:280714
NextBio:20804893 ArrayExpress:F1ML85 Uniprot:F1ML85
Length = 844
Score = 432 (157.1 bits), Expect = 9.5e-40, P = 9.5e-40
Identities = 101/247 (40%), Positives = 143/247 (57%)
Query: 150 SEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENKWK 209
+E RQ L W NP + P + + N SQ YN D + E ++ E +
Sbjct: 167 AEFQRQ--LHWALNPQQCPDSGQRIDEA--NGLSQPAVYYNPDQIPP--ENSSFMERCF- 219
Query: 210 ESPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE----PP-LALFAICTPFG 264
V + N +G ++ +GR+K LHGQN+K ++ PP LALFAI TP
Sbjct: 220 ----VCRLRCLLD--NSSG-FLAMNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQ 272
Query: 265 PPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYV 323
PPS+LEI K +F++KHKLD + D +GK++LGY++ EL+ G GY VH D+ Y
Sbjct: 273 PPSILEIRTKNFIFRTKHKLDFTPTGCDAKGKLVLGYTEAELSMRGSGYQFVHAADMLYC 332
Query: 324 ASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRD 383
A H ++KTG SGMI +R T D W W+Q+++RLVYKN +PD++I+T RPL +EEG +
Sbjct: 333 AEYHIRMIKTGESGMIVFRLLTKDNRWAWVQSNARLVYKNGRPDYIIATQRPLTDEEGME 392
Query: 384 LLGKRTM 390
L KR M
Sbjct: 393 HLNKRNM 399
>UNIPROTKB|F1NLX8 [details] [associations]
symbol:AHR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006950 "response to
stress" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0009410 "response to xenobiotic stimulus"
evidence=IEA] [GO:0030850 "prostate gland development"
evidence=IEA] [GO:0030888 "regulation of B cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006950 GO:GO:0004879
GO:GO:0043565 GO:GO:0003705 GO:GO:0000122 GO:GO:0044212
SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
GeneTree:ENSGT00700000104038 OMA:QQLCQKM GO:GO:0045899
GO:GO:0030888 EMBL:AADN02000881 EMBL:AADN02000879 EMBL:AADN02000880
IPI:IPI00583925 Ensembl:ENSGALT00000017616 Uniprot:F1NLX8
Length = 839
Score = 430 (156.4 bits), Expect = 1.5e-39, P = 1.5e-39
Identities = 96/242 (39%), Positives = 139/242 (57%)
Query: 155 QTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENKWKESPPV 214
Q L W NP++S + P + G + SQ YN D L E ++ E + +
Sbjct: 151 QRQLHWALNPAQSADSGPSV-QGDNGF-SQPANYYNPDQLPP--ENSSFMERNF-----I 201
Query: 215 VSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLL 269
+ N +G ++ +GR+K LHGQN+K ++ P LALFA+ TP PPS+L
Sbjct: 202 CRLRCLLD--NSSG-FLAMNFQGRLKFLHGQNKKGKDGAALSPQLALFAVATPLQPPSIL 258
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQ 328
EI K +F++KHKLD + D +GK++LGY++ EL G GY +H D+ Y A H
Sbjct: 259 EIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHV 318
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
++KTG SGM +R T + W W+Q ++RLVYKN +PD++IST RPL +EEG + L KR
Sbjct: 319 RMMKTGESGMTVFRLLTKENRWAWVQANARLVYKNGRPDYIISTQRPLTDEEGAEHLRKR 378
Query: 389 TM 390
M
Sbjct: 379 NM 380
>UNIPROTKB|E2QWU8 [details] [associations]
symbol:AHR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
CTD:196 KO:K09093 OMA:QQLCQKM EMBL:AAEX03009350 RefSeq:XP_532485.2
Ensembl:ENSCAFT00000003863 GeneID:475251 KEGG:cfa:475251
Uniprot:E2QWU8
Length = 853
Score = 428 (155.7 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 81/164 (49%), Positives = 114/164 (69%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 236 MNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 295
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +GK++LGY++ EL G GY +H D+ Y A H ++KTG SGMI +R T
Sbjct: 296 PTACDAKGKLVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGMIVFRLLTK 355
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
D W W+Q+++RLVYKN +PD++I+T RPL +EEG + L KR M
Sbjct: 356 DNRWTWVQSNARLVYKNGRPDYIIATQRPLTDEEGTEHLRKRNM 399
>RGD|2074 [details] [associations]
symbol:Ahr "aryl hydrocarbon receptor" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0001541 "ovarian follicle
development" evidence=IMP] [GO:0001568 "blood vessel development"
evidence=ISO] [GO:0001569 "patterning of blood vessels" evidence=ISO]
[GO:0001782 "B cell homeostasis" evidence=ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0001974 "blood vessel remodeling"
evidence=ISO] [GO:0002260 "lymphocyte homeostasis" evidence=ISO]
[GO:0002376 "immune system process" evidence=ISO] [GO:0003085
"negative regulation of systemic arterial blood pressure"
evidence=ISO] [GO:0003214 "cardiac left ventricle morphogenesis"
evidence=ISO] [GO:0003243 "circumferential growth involved in left
ventricle morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;TAS] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0004874 "aryl
hydrocarbon receptor activity" evidence=IDA;TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0006915 "apoptotic process" evidence=ISO;TAS]
[GO:0006950 "response to stress" evidence=ISO;IDA] [GO:0007049 "cell
cycle" evidence=ISO;TAS] [GO:0008015 "blood circulation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISO;IDA;TAS] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IEP;IMP] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO;IDA;TAS] [GO:0030850 "prostate gland
development" evidence=ISO] [GO:0030888 "regulation of B cell
proliferation" evidence=ISO] [GO:0032355 "response to estradiol
stimulus" evidence=IEP] [GO:0035162 "embryonic hemopoiesis"
evidence=ISO] [GO:0035166 "post-embryonic hemopoiesis" evidence=ISO]
[GO:0040010 "positive regulation of growth rate" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043029
"T cell homeostasis" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISO] [GO:0045793 "positive regulation of cell
size" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation complex
assembly" evidence=ISO] [GO:0045906 "negative regulation of
vasoconstriction" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048514 "blood vessel
morphogenesis" evidence=ISO] [GO:0048536 "spleen development"
evidence=ISO] [GO:0048608 "reproductive structure development"
evidence=ISO] [GO:0048732 "gland development" evidence=ISO]
[GO:0048745 "smooth muscle tissue development" evidence=ISO]
[GO:0050880 "regulation of blood vessel size" evidence=ISO]
[GO:0051879 "Hsp90 protein binding" evidence=ISO] [GO:0060547
"negative regulation of necrotic cell death" evidence=ISO]
[GO:0060841 "venous blood vessel development" evidence=ISO]
[GO:0060993 "kidney morphogenesis" evidence=ISO] [GO:0061009 "common
bile duct development" evidence=ISO] [GO:0071320 "cellular response
to cAMP" evidence=ISO] [GO:0071385 "cellular response to
glucocorticoid stimulus" evidence=IEP] [GO:0072102 "glomerulus
morphogenesis" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:2074 GO:GO:0005829 GO:GO:0005634
GO:GO:0006915 GO:GO:0006950 GO:GO:0032355 GO:GO:0003677 GO:GO:0004879
GO:GO:0043565 GO:GO:0071385 GO:GO:0003705 GO:GO:0000122 GO:GO:0044212
GO:GO:0007049 GO:GO:0001541 SMART:SM00086 GO:GO:0009410
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG253623 GO:GO:0004874
CTD:196 HOGENOM:HOG000252935 HOVERGEN:HBG007313 KO:K09093
OrthoDB:EOG42BX7X GO:GO:0045899 GO:GO:0030850 GO:GO:0030888
EMBL:U09000 EMBL:U04860 EMBL:AF082124 EMBL:AF082125 EMBL:AF082126
IPI:IPI00231916 IPI:IPI00364957 PIR:S58375 RefSeq:NP_037281.2
UniGene:Rn.91370 ProteinModelPortal:P41738 IntAct:P41738
STRING:P41738 PhosphoSite:P41738 PRIDE:P41738 GeneID:25690
KEGG:rno:25690 UCSC:RGD:2074 InParanoid:P41738 BindingDB:P41738
ChEMBL:CHEMBL5400 NextBio:607689 ArrayExpress:P41738
Genevestigator:P41738 GermOnline:ENSRNOG00000004342 Uniprot:P41738
Length = 853
Score = 421 (153.3 bits), Expect = 7.6e-38, P = 7.6e-38
Identities = 76/164 (46%), Positives = 116/164 (70%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
>UNIPROTKB|G3V6M2 [details] [associations]
symbol:Ahr "RCG61977, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006950
"response to stress" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0009410 "response to xenobiotic
stimulus" evidence=IEA] [GO:0030850 "prostate gland development"
evidence=IEA] [GO:0030888 "regulation of B cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:2074 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
OMA:QQLCQKM EMBL:CH473947 Ensembl:ENSRNOT00000006618 Uniprot:G3V6M2
Length = 853
Score = 421 (153.3 bits), Expect = 7.6e-38, P = 7.6e-38
Identities = 76/164 (46%), Positives = 116/164 (70%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL N G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
>UNIPROTKB|F1SEI6 [details] [associations]
symbol:F1SEI6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
EMBL:FP312884 Ensembl:ENSSSCT00000016739 Uniprot:F1SEI6
Length = 385
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 94/233 (40%), Positives = 133/233 (57%)
Query: 150 SEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENKWK 209
+E RQ L W NPS+ P + + + SQ YN + L EN +
Sbjct: 167 AEFQRQ--LHWALNPSQCPDSGQRIDEA--SGLSQPAAYYNPEQLPP--------ENSFM 214
Query: 210 ESPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE----PP-LALFAICTPFG 264
E V + N +G ++ +GR+K LHGQN+K ++ PP LALFAI TP
Sbjct: 215 ERCFVCRLRCLLD--NSSG-FLAMNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQ 271
Query: 265 PPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYV 323
PPS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY +H D+ Y
Sbjct: 272 PPSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYC 331
Query: 324 ASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPL 376
A H ++KTG SGMI +R T D W W+Q+++RLVYKN +PD++I+T RPL
Sbjct: 332 AEYHVRMIKTGESGMIVFRLLTKDNRWTWVQSNARLVYKNGRPDYIIATQRPL 384
>UNIPROTKB|I3L5U3 [details] [associations]
symbol:I3L5U3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
EMBL:FP312884 Ensembl:ENSSSCT00000027011 OMA:SEGLIFY Uniprot:I3L5U3
Length = 394
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 94/233 (40%), Positives = 133/233 (57%)
Query: 150 SEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENKWK 209
+E RQ L W NPS+ P + + + SQ YN + L EN +
Sbjct: 176 AEFQRQ--LHWALNPSQCPDSGQRIDEA--SGLSQPAAYYNPEQLPP--------ENSFM 223
Query: 210 ESPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEE----PP-LALFAICTPFG 264
E V + N +G ++ +GR+K LHGQN+K ++ PP LALFAI TP
Sbjct: 224 ERCFVCRLRCLLD--NSSG-FLAMNFQGRLKYLHGQNKKGKDGSILPPQLALFAIATPLQ 280
Query: 265 PPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYV 323
PPS+LEI K +F++KHKLD + D +GK++LGY++ EL G GY +H D+ Y
Sbjct: 281 PPSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYC 340
Query: 324 ASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPL 376
A H ++KTG SGMI +R T D W W+Q+++RLVYKN +PD++I+T RPL
Sbjct: 341 AEYHVRMIKTGESGMIVFRLLTKDNRWTWVQSNARLVYKNGRPDYIIATQRPL 393
>UNIPROTKB|Q8R4S2 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:10096 "Mus
spretus" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0006915 "apoptotic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0006950 GO:GO:0003677 GO:GO:0004879
GO:GO:0007049 SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG007313 EMBL:AF405571
ProteinModelPortal:Q8R4S2 PRIDE:Q8R4S2 Uniprot:Q8R4S2
Length = 854
Score = 415 (151.1 bits), Expect = 8.8e-37, P = 8.8e-37
Identities = 75/164 (45%), Positives = 115/164 (70%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
>UNIPROTKB|Q8R4S4 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:10103 "Mus
spicilegus" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0006915 "apoptotic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0006950 GO:GO:0003677 GO:GO:0004879
GO:GO:0007049 SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG007313 EMBL:AF405569
ProteinModelPortal:Q8R4S4 Uniprot:Q8R4S4
Length = 854
Score = 415 (151.1 bits), Expect = 8.8e-37, P = 8.8e-37
Identities = 75/164 (45%), Positives = 115/164 (70%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
>UNIPROTKB|Q8R4S7 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:10089 "Mus
caroli" [GO:0004879 "ligand-activated sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006915 "apoptotic process" evidence=ISS] [GO:0006950 "response
to stress" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISS] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:105043
GO:GO:0005634 GO:GO:0005737 GO:GO:0006915 GO:GO:0006950
GO:GO:0003677 GO:GO:0004879 GO:GO:0007049 SMART:SM00086
GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG007313
EMBL:AF405564 ProteinModelPortal:Q8R4S7 Uniprot:Q8R4S7
Length = 854
Score = 410 (149.4 bits), Expect = 4.7e-36, P = 4.7e-36
Identities = 75/164 (45%), Positives = 114/164 (69%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 235 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 294
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 295 PSGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 354
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+M
Sbjct: 355 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRSM 398
>UNIPROTKB|Q8R4S5 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:57486 "Mus
musculus molossinus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA;TAS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006805 "xenobiotic metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=ISS] [GO:0006950 "response
to stress" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISS] [GO:0030850 "prostate gland development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IDA] [GO:0048608 "reproductive structure development"
evidence=IMP] [GO:0048732 "gland development" evidence=IMP]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005737
GO:GO:0006915 GO:GO:0006950 GO:GO:0004879 GO:GO:0043565
GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0007049
GO:GO:0006805 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG007313 GO:GO:0045899 GO:GO:0030850 UniGene:Mm.341377
EMBL:AF405568 ProteinModelPortal:Q8R4S5 SMR:Q8R4S5 Uniprot:Q8R4S5
Length = 883
Score = 410 (149.4 bits), Expect = 5.2e-36, P = 5.2e-36
Identities = 74/163 (45%), Positives = 114/163 (69%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I+T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIATQRPLTDEEGREHLQKRS 393
Score = 121 (47.7 bits), Expect = 0.00098, P = 0.00098
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
+SD++HQSVYEL+H+EDR E QRQL W L P+SA
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWA--LNPDSA 181
>UNIPROTKB|Q8R4S6 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:10091 "Mus
musculus castaneus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA;TAS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006805 "xenobiotic metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=ISS] [GO:0006950 "response
to stress" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISS] [GO:0030850 "prostate gland development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IDA] [GO:0048608 "reproductive structure development"
evidence=IMP] [GO:0048732 "gland development" evidence=IMP]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005737
GO:GO:0006915 GO:GO:0006950 GO:GO:0004879 GO:GO:0043565
GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0007049
GO:GO:0006805 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG007313 GO:GO:0045899 GO:GO:0030850 EMBL:AF405565
UniGene:Mm.341377 ProteinModelPortal:Q8R4S6 SMR:Q8R4S6
Uniprot:Q8R4S6
Length = 848
Score = 407 (148.3 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 74/163 (45%), Positives = 113/163 (69%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIVTQRPLTDEEGREHLQKRS 393
Score = 121 (47.7 bits), Expect = 0.00094, P = 0.00094
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
+SD++HQSVYEL+H+EDR E QRQL W L P+SA
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWA--LNPDSA 181
>MGI|MGI:105043 [details] [associations]
symbol:Ahr "aryl-hydrocarbon receptor" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0001541 "ovarian follicle
development" evidence=ISO] [GO:0001568 "blood vessel development"
evidence=IMP] [GO:0001569 "patterning of blood vessels"
evidence=IMP] [GO:0001782 "B cell homeostasis" evidence=IMP;TAS]
[GO:0001889 "liver development" evidence=IMP] [GO:0001922 "B-1 B
cell homeostasis" evidence=TAS] [GO:0001974 "blood vessel
remodeling" evidence=IMP] [GO:0002260 "lymphocyte homeostasis"
evidence=IMP;TAS] [GO:0002376 "immune system process" evidence=IMP]
[GO:0003085 "negative regulation of systemic arterial blood
pressure" evidence=IMP] [GO:0003214 "cardiac left ventricle
morphogenesis" evidence=IMP] [GO:0003243 "circumferential growth
involved in left ventricle morphogenesis" evidence=IMP] [GO:0003677
"DNA binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO;IDA;TAS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004874
"aryl hydrocarbon receptor activity" evidence=ISO] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829
"cytosol" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA;TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0006805 "xenobiotic metabolic
process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=IDA] [GO:0006950 "response to stress" evidence=ISO;IDA]
[GO:0007049 "cell cycle" evidence=IDA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008217 "regulation of blood pressure"
evidence=TAS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISO;IDA] [GO:0009636 "response to toxic substance"
evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=ISO] [GO:0030183 "B cell differentiation" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISO] [GO:0030850 "prostate gland development"
evidence=IMP] [GO:0030888 "regulation of B cell proliferation"
evidence=ISO] [GO:0034751 "aryl hydrocarbon receptor complex"
evidence=TAS] [GO:0034752 "cytosolic aryl hydrocarbon receptor
complex" evidence=TAS] [GO:0034753 "nuclear aryl hydrocarbon
receptor complex" evidence=TAS] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0035166 "post-embryonic hemopoiesis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043029 "T cell homeostasis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045793 "positive regulation of cell size"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IDA] [GO:0045906 "negative regulation of vasoconstriction"
evidence=IMP] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis"
evidence=IMP] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048608 "reproductive structure development" evidence=IMP]
[GO:0048732 "gland development" evidence=IMP] [GO:0048745 "smooth
muscle tissue development" evidence=IMP] [GO:0050880 "regulation of
blood vessel size" evidence=IMP] [GO:0051879 "Hsp90 protein
binding" evidence=ISO;TAS] [GO:0060420 "regulation of heart growth"
evidence=TAS] [GO:0060547 "negative regulation of necrotic cell
death" evidence=IMP] [GO:0060841 "venous blood vessel development"
evidence=IMP] [GO:0060993 "kidney morphogenesis" evidence=IMP]
[GO:0061009 "common bile duct development" evidence=IMP]
[GO:0071320 "cellular response to cAMP" evidence=IDA] [GO:0072102
"glomerulus morphogenesis" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005737 GO:GO:0006915
GO:GO:0006950 GO:GO:0004879 GO:GO:0043565 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0007049 GO:GO:0006805
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG007313
GO:GO:0045899 GO:GO:0030850 EMBL:AF405565 UniGene:Mm.341377
ProteinModelPortal:Q8R4S6 SMR:Q8R4S6 Uniprot:Q8R4S6
Length = 848
Score = 407 (148.3 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 74/163 (45%), Positives = 113/163 (69%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K LHGQN+K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 231 MNFQGRLKYLHGQNKKGKDGALLPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 290
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ + A +H ++KTG SGM +R
Sbjct: 291 PIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMTVFRLLAK 350
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRT 389
W+W+Q+++RL+Y+N +PD++I T RPL +EEGR+ L KR+
Sbjct: 351 HSRWRWVQSNARLIYRNGRPDYIIVTQRPLTDEEGREHLQKRS 393
Score = 121 (47.7 bits), Expect = 0.00094, P = 0.00094
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 574 ESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESA 609
+SD++HQSVYEL+H+EDR E QRQL W L P+SA
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWA--LNPDSA 181
>UNIPROTKB|P35869 [details] [associations]
symbol:AHR "Aryl hydrocarbon receptor" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0030850 "prostate gland
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA;TAS]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0030888 "regulation of B cell
proliferation" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001568 "blood
vessel development" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=TAS] [GO:0046983 "protein
dimerization activity" evidence=TAS] [GO:0034752 "cytosolic aryl
hydrocarbon receptor complex" evidence=TAS] [GO:0005667
"transcription factor complex" evidence=TAS] [GO:0006805
"xenobiotic metabolic process" evidence=TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IDA]
[GO:0007049 "cell cycle" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0006950 "response to
stress" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051879 "Hsp90 protein binding" evidence=IDA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0006915 GO:GO:0006950
GO:GO:0032355 EMBL:CH471073 GO:GO:0004879 GO:GO:0043565
GO:GO:0071385 EMBL:CH236948 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 GO:GO:0044212 GO:GO:0007049 GO:GO:0006805
GO:GO:0001541 GO:GO:0046982 SMART:SM00086 GO:GO:0001568
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG253623 EMBL:D16354
EMBL:L19872 EMBL:AC003075 EMBL:BC069390 EMBL:BC070080 EMBL:U28063
EMBL:U27656 EMBL:U27657 EMBL:U28060 EMBL:U28061 EMBL:U28062
EMBL:U28064 EMBL:U28066 EMBL:U28065 EMBL:D38044 IPI:IPI00021008
PIR:S59514 RefSeq:NP_001612.1 UniGene:Hs.171189 DisProt:DP00381
ProteinModelPortal:P35869 SMR:P35869 DIP:DIP-946N IntAct:P35869
STRING:P35869 PhosphoSite:P35869 DMDM:3041653 PaxDb:P35869
PRIDE:P35869 Ensembl:ENST00000242057 Ensembl:ENST00000463496
GeneID:196 KEGG:hsa:196 UCSC:uc011jxz.1 CTD:196
GeneCards:GC07P017304 HGNC:HGNC:348 HPA:CAB005072 HPA:HPA029722
HPA:HPA029723 MIM:600253 neXtProt:NX_P35869 PharmGKB:PA24641
HOGENOM:HOG000252935 HOVERGEN:HBG007313 InParanoid:P35869 KO:K09093
OMA:QQLCQKM OrthoDB:EOG42BX7X PhylomeDB:P35869 BindingDB:P35869
ChEMBL:CHEMBL3201 ChiTaRS:AHR GenomeRNAi:196 NextBio:786
Bgee:P35869 CleanEx:HS_AHR Genevestigator:P35869 GO:GO:0034752
GO:GO:0051879 GO:GO:0045899 GO:GO:0030850 GO:GO:0030888
Uniprot:P35869
Length = 848
Score = 406 (148.0 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 75/162 (46%), Positives = 112/162 (69%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +G++K LHGQ +K ++ PP LALFAI TP PPS+LEI K +F++KHKLD +
Sbjct: 237 MNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFT 296
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ D +G+++LGY++ EL G GY +H D+ Y A +H ++KTG SGMI +R T
Sbjct: 297 PIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMIVFRLLTK 356
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR 388
+ W W+Q+++RL+YKN +PD++I T RPL +EEG + L KR
Sbjct: 357 NNRWTWVQSNARLLYKNGRPDYIIVTQRPLTDEEGTEHLRKR 398
>ZFIN|ZDB-GENE-990714-16 [details] [associations]
symbol:ahr2 "aryl hydrocarbon receptor 2"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IPI]
[GO:0043565 "sequence-specific DNA binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IPI] [GO:0009410 "response to xenobiotic stimulus"
evidence=IMP;IDA;IPI] [GO:0042221 "response to chemical stimulus"
evidence=IGI;IDA;IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-990714-16 GO:GO:0005634
GO:GO:0005737 GO:GO:0009636 GO:GO:0043565 GO:GO:0045944
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 GO:GO:0009410
Gene3D:4.10.280.10 EMBL:AF063446 IPI:IPI00491298 RefSeq:NP_571339.1
UniGene:Dr.79593 ProteinModelPortal:Q9YGV3 STRING:Q9YGV3
GeneID:30517 KEGG:dre:30517 CTD:30517 HOVERGEN:HBG105620
InParanoid:Q9YGV3 NextBio:20806903 ArrayExpress:Q9YGV3
Uniprot:Q9YGV3
Length = 1027
Score = 385 (140.6 bits), Expect = 9.6e-33, P = 9.6e-33
Identities = 74/164 (45%), Positives = 107/164 (65%)
Query: 233 LDIRGRIKILHGQNRKLEE-----PPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K LHGQN+ E+ P LALF I TP PPS+LEI K ++F++KHKLD +
Sbjct: 242 LNFQGRLKYLHGQNKLAEDGTLAHPQLALFIIATPLQPPSILEIRSKTLLFQTKHKLDFT 301
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
+ +D RGK++LGY++ EL G GY +H D+ Y A H ++KTG SG+ +R +
Sbjct: 302 PMGIDTRGKVVLGYTEIELCMRGSGYQFIHAADMMYCADNHIRMIKTGESGLTVFRLLSK 361
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
G W W+Q ++RLVYK +PDF+I+ R L EEG + L +R +
Sbjct: 362 GGTWIWVQANARLVYKAGRPDFIIARQRALTNEEGEEHLRQRKL 405
>ZFIN|ZDB-GENE-020531-2 [details] [associations]
symbol:ahr1a "aryl hydrocarbon receptor 1a"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0042221 "response
to chemical stimulus" evidence=IGI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-020531-2 GO:GO:0005737 GO:GO:0003677 GO:GO:0042221
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 GeneTree:ENSGT00700000104038
EMBL:BX511151 IPI:IPI00866185 Ensembl:ENSDART00000049830
ArrayExpress:F1R5Y6 Bgee:F1R5Y6 Uniprot:F1R5Y6
Length = 808
Score = 364 (133.2 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 68/164 (41%), Positives = 103/164 (62%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
++ +GR+K L+GQN + PP LALFA+ P PPS+LEI K +MFK+K+KLD +
Sbjct: 242 VNFQGRLKFLYGQNESTGDGKRIPPQLALFALACPLQPPSILEIRTKNLMFKTKYKLDFT 301
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
++ D +LGY++ EL N G GY +H D+ Y A H +++TG +G+ +R T
Sbjct: 302 PIACDTNWNFVLGYTEAELCNSGSGYQFIHAADMMYCAEGHMRMMRTGKTGLTVFRLLTK 361
Query: 347 DGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTM 390
W W+Q++ +LVYKN +PD +I++HR + EEG + L R M
Sbjct: 362 QNRWVWVQSNGKLVYKNGQPDCIITSHRVITAEEGEENLRNRAM 405
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 565 NSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMW--NSFLPPESAGI------SLQEC 616
N + Y +SD++HQSVYEL+H+EDR E QRQL W N P+S + + + C
Sbjct: 148 NIEDYLGFHQSDVIHQSVYELIHTEDRHEFQRQLHWALNPGFTPDSRQLVQASPDASRTC 207
Query: 617 FLQE-----NSYLLERSF 629
+ E NS LER+F
Sbjct: 208 YSPEQLSLENSTCLERNF 225
>UNIPROTKB|E1C4K6 [details] [associations]
symbol:LOC424033 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AADN02034423 EMBL:AADN02034424
IPI:IPI00812541 Ensembl:ENSGALT00000008831 OMA:CMERNFT
Uniprot:E1C4K6
Length = 755
Score = 347 (127.2 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 77/186 (41%), Positives = 112/186 (60%)
Query: 233 LDIRGRIKILHGQNRK-----LEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L+ +GR+K L GQ ++ LE PLALFAI TPF P S+L++ K + F+SKHKLD +
Sbjct: 225 LNFQGRLKQLLGQQKRASDMSLEPLPLALFAIVTPFQPFSILKLQTKMLFFQSKHKLDFT 284
Query: 288 LVSMDQRGKMLLGYSDTELANMG-GYDLVHYDDLAYVASAHQE--LLKTGASGMIAYRFQ 344
++ D G+++LGY++ EL + G GY VH D+ A +H ++KTG +G +R
Sbjct: 285 PIACDSWGRVVLGYTEAELCSRGSGYQFVHTADIICCAESHVRAPVIKTGQTGTTVFRLL 344
Query: 345 TNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYL--DAGLN 402
T +G W WLQ ++ LVYK +PD +IS R L EEG + L KR + S+ +A L
Sbjct: 345 TKNGSWVWLQATAWLVYKGDEPDCIISRQRVLSNEEGEEHLRKRNLQLPFSFATGEAILY 404
Query: 403 NSYFSD 408
+ F D
Sbjct: 405 GNNFPD 410
>WB|WBGene00000096 [details] [associations]
symbol:ahr-1 species:6239 "Caenorhabditis elegans"
[GO:0004871 "signal transducer activity" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IDA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] [GO:0005622 "intracellular" evidence=TAS] [GO:0004874
"aryl hydrocarbon receptor activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0001085 "RNA polymerase II transcription
factor binding" evidence=IPI] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0007399 GO:GO:0006355 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0005622 GO:GO:0009410
GeneTree:ENSGT00700000104038 EMBL:AF039570 EMBL:Z81048 PIR:T19898
RefSeq:NP_001021036.1 RefSeq:NP_001021037.1 UniGene:Cel.19551
ProteinModelPortal:O44712 SMR:O44712 IntAct:O44712 STRING:O44712
EnsemblMetazoa:C41G7.5a GeneID:172788 KEGG:cel:CELE_C41G7.5
UCSC:C41G7.5a CTD:172788 WormBase:C41G7.5a WormBase:C41G7.5b
eggNOG:NOG253623 InParanoid:O44712 OMA:FLQCKAH NextBio:877003
GO:GO:0004874 Uniprot:O44712
Length = 602
Score = 314 (115.6 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 73/181 (40%), Positives = 111/181 (61%)
Query: 232 RLDIRGRIKILHG------QNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLD 285
R+D+RG++ LHG R P L + +CTPF PPS ++ ++++ K+KH+LD
Sbjct: 235 RIDMRGKLMSLHGLPSSYVMGRTASGPVLGMICVCTPFVPPSTSDLASEDMILKTKHQLD 294
Query: 286 LSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRF-Q 344
+LVSMDQ+ +L +T+L M Y+LVH +D +A AH+E +K G+SG++ YR
Sbjct: 295 GALVSMDQKVYEMLEIDETDLP-MPLYNLVHVEDAVCMAEAHKEAIKNGSSGLLVYRLVS 353
Query: 345 TNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKR-TMDFKV-SYLDAGLN 402
T ++Q+S R+ YKNSKP+ + THR L E EG LL KR T+ K+ S+ D+ L
Sbjct: 354 TKTRRTYFVQSSCRMFYKNSKPESIGLTHRLLNEVEGTMLLEKRSTLKAKLLSFDDSFLQ 413
Query: 403 N 403
+
Sbjct: 414 S 414
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQEN 621
A +N + Y +SD++HQ VY+L+HSEDR+++++QL N +P SA + F +N
Sbjct: 153 ASENVENYLGFHQSDVLHQPVYDLIHSEDRDDIRQQLDSNFHIPTSSASNQF-DVFAPQN 211
Query: 622 SYLLERS 628
S LER+
Sbjct: 212 SKYLERN 218
Score = 40 (19.1 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 176 NGHINYPSQEIKKYNG 191
NG I Y S+ ++ Y G
Sbjct: 147 NGEIYYASENVENYLG 162
>UNIPROTKB|Q91YB0 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:1026970 "Nannospalax galili" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 EMBL:AJ318057
GO:GO:0005737 GO:GO:0005694 GO:GO:0003677 GO:GO:0016573
GO:GO:0003700 GO:GO:0006351 GO:GO:0006974 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 GO:GO:0004402 HOVERGEN:HBG050997
ProteinModelPortal:Q91YB0 Uniprot:Q91YB0
Length = 865
Score = 213 (80.0 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 58/194 (29%), Positives = 89/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 219 FKSLNSVPTSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 276
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 277 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKS 336
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 337 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGIEESL 395
Query: 397 LDAGLNNSYFSDSD 410
DA + S S SD
Sbjct: 396 PDAAADKSQDSGSD 409
>UNIPROTKB|Q91YB2 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:164324 "Spalax carmeli" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0016573 GO:GO:0003700
GO:GO:0006351 GO:GO:0006974 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 GO:GO:0004402 HOVERGEN:HBG050997 EMBL:AJ318058
ProteinModelPortal:Q91YB2 Uniprot:Q91YB2
Length = 865
Score = 213 (80.0 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 58/194 (29%), Positives = 89/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 219 FKSLNSVPTSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 276
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 277 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKS 336
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 337 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGIEESL 395
Query: 397 LDAGLNNSYFSDSD 410
DA + S S SD
Sbjct: 396 PDAAADKSQDSGSD 409
>UNIPROTKB|Q91YA8 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:134510 "Nannospalax judaei" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0016573 GO:GO:0003700
GO:GO:0006351 GO:GO:0006974 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 HOVERGEN:HBG050997 EMBL:AJ318059 HSSP:Q99814
ProteinModelPortal:Q91YA8 Uniprot:Q91YA8
Length = 865
Score = 209 (78.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 57/194 (29%), Positives = 88/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 219 FKSLNSVPTSAHNGFEGTIQRTHRLSYEDRVCSVATVRLATPQFIKEMCTVEEPNEE--F 276
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 277 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKS 336
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 337 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGIEESL 395
Query: 397 LDAGLNNSYFSDSD 410
DA + S SD
Sbjct: 396 PDATADKGQDSGSD 409
>ZFIN|ZDB-GENE-030408-2 [details] [associations]
symbol:clock3 "clock homolog 3 (mouse)" species:7955
"Danio rerio" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009648
"photoperiodism" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009416 "response to light stimulus"
evidence=IGI] [GO:0007623 "circadian rhythm" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF00010 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-030408-2 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009648 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 OrthoDB:EOG476JZV EMBL:BX901913 EMBL:BX548248
EMBL:CR926462 EMBL:BC162682 IPI:IPI00483024 UniGene:Dr.86747
STRING:B3DH92 Ensembl:ENSDART00000103119 Ensembl:ENSDART00000133959
Uniprot:B3DH92
Length = 820
Score = 207 (77.9 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 71/259 (27%), Positives = 120/259 (46%)
Query: 172 PILPNGHIN--YPSQ-EIKKYNGDPLKSLAEM----NTIGENKWKESPPVVSPKSYYQSY 224
P++ +G + SQ +I+ N D LKS +M + + + + PPV + ++
Sbjct: 149 PVVDHGEVYKALSSQPDIENLNSDYLKSKNQMEFCCHMLRGSVDPKKPPVYEYVKFIGNF 208
Query: 225 NE--NGPSE-RLDIRGRIKILHGQNRKLEEPP--LALFAICTP--FGPPSLLEIPHKEVM 277
N P + R + G ++ H ++ +A + P ++E P++E
Sbjct: 209 KSLVNMPQKTRNGLEGILQ--HSLQPAFDDQLCFIATVRLAKPQFIKEMCMVEEPNEE-- 264
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 265 FTSRHSLEWKFLLLDHRAPPIIGYMPFEVLGTSGYDYYHVDDLHSLAKCHEHLMQFGKGK 324
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPL----MEEEGRDLLG----- 386
YRF T W WLQT+ + Y NS+P+F++ TH + + E R +G
Sbjct: 325 SCYYRFLTKGQQWIWLQTNYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRREMGIEESP 384
Query: 387 -KRTMDFKVSYLDAGLNNS 404
+ T D K+S + LNNS
Sbjct: 385 PELTAD-KISGSETQLNNS 402
>UNIPROTKB|D4A4R8 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00201128 UniGene:Rn.205839 EMBL:CH473981
Ensembl:ENSRNOT00000002981 Uniprot:D4A4R8
Length = 833
Score = 207 (77.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 56/194 (28%), Positives = 88/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 219 FKSLNSVSTSTHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 276
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 277 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQYGKGKS 336
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 337 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGIEESL 395
Query: 397 LDAGLNNSYFSDSD 410
+ + S S SD
Sbjct: 396 PETAADKSQDSGSD 409
>UNIPROTKB|F1MLT7 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071479 GO:GO:0070888 OMA:AHEKMAQ EMBL:DAAA02017731
EMBL:DAAA02017732 IPI:IPI00999446 Ensembl:ENSBTAT00000061480
Uniprot:F1MLT7
Length = 846
Score = 207 (77.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 56/194 (28%), Positives = 88/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 220 FKSLNSVSTSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 277
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 278 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKS 337
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 338 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGIEESL 396
Query: 397 LDAGLNNSYFSDSD 410
+ + S S SD
Sbjct: 397 PETAADKSQDSGSD 410
>UNIPROTKB|O15516 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IDA] [GO:0000077
"DNA damage checkpoint" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0032922 "circadian regulation of gene expression" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007623 "circadian rhythm"
evidence=TAS] [GO:0009648 "photoperiodism" evidence=TAS]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0070888
"E-box binding" evidence=IDA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005829 GO:GO:0000077
GO:GO:0005694 GO:GO:0007165 GO:GO:0009649 GO:GO:0016573
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0071479 GO:GO:0070888
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
PDB:4H10 PDBsum:4H10 GO:GO:0004402 GO:GO:0009648 CTD:9575
eggNOG:NOG300360 HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223
EMBL:AF011568 EMBL:AH008440 EMBL:EF015897 EMBL:AB002332
EMBL:AK291708 EMBL:BC126157 EMBL:BC126159 EMBL:AB005535
IPI:IPI00007284 RefSeq:NP_001254772.1 RefSeq:NP_004889.1
UniGene:Hs.436975 UniGene:Hs.689578 ProteinModelPortal:O15516
SMR:O15516 IntAct:O15516 STRING:O15516 PhosphoSite:O15516
PRIDE:O15516 DNASU:9575 Ensembl:ENST00000309964
Ensembl:ENST00000381322 Ensembl:ENST00000513440 GeneID:9575
KEGG:hsa:9575 UCSC:uc003haz.1 GeneCards:GC04M056294 HGNC:HGNC:2082
HPA:HPA001867 HPA:HPA027565 MIM:601851 neXtProt:NX_O15516
PharmGKB:PA26609 InParanoid:O15516 OMA:AHEKMAQ OrthoDB:EOG476JZV
PhylomeDB:O15516 GenomeRNAi:9575 NextBio:35907 ArrayExpress:O15516
Bgee:O15516 CleanEx:HS_CLOCK Genevestigator:O15516
GermOnline:ENSG00000134852 Uniprot:O15516
Length = 846
Score = 207 (77.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 56/194 (28%), Positives = 88/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 219 FKSLNSVSSSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 276
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 277 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKS 336
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 337 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGIEESL 395
Query: 397 LDAGLNNSYFSDSD 410
+ + S S SD
Sbjct: 396 PETAADKSQDSGSD 409
>UNIPROTKB|Q5RAK8 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9601 "Pongo abelii" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0005694
GO:GO:0003677 GO:GO:0016573 GO:GO:0003700 GO:GO:0006351
GO:GO:0006974 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0004402 CTD:9575 HOVERGEN:HBG050997 KO:K02223 EMBL:CR859007
RefSeq:NP_001125706.1 UniGene:Pab.7567 ProteinModelPortal:Q5RAK8
GeneID:100172630 KEGG:pon:100172630 InParanoid:Q5RAK8
Uniprot:Q5RAK8
Length = 846
Score = 207 (77.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 56/194 (28%), Positives = 88/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 219 FKSLNSVSSSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 276
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 277 ASRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKS 336
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 337 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELSIEESL 395
Query: 397 LDAGLNNSYFSDSD 410
+ + S S SD
Sbjct: 396 PEIAADKSQDSGSD 409
>UNIPROTKB|F1M012 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00557436 Ensembl:ENSRNOT00000051891
ArrayExpress:F1M012 Uniprot:F1M012
Length = 857
Score = 207 (77.9 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 56/194 (28%), Positives = 88/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 221 FKSLNSVSTSTHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 278
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 279 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQYGKGKS 338
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 339 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGIEESL 397
Query: 397 LDAGLNNSYFSDSD 410
+ + S S SD
Sbjct: 398 PETAADKSQDSGSD 411
>RGD|620271 [details] [associations]
symbol:Clock "clock circadian regulator" species:10116 "Rattus
norvegicus" [GO:0000077 "DNA damage checkpoint" evidence=IEA;ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=ISO;NAS] [GO:0009649
"entrainment of circadian clock" evidence=IEP] [GO:0032922
"circadian regulation of gene expression" evidence=IEA;ISO;ISS]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0070888 "E-box binding"
evidence=IEA;ISO] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:620271 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0009649
GO:GO:0016573 GO:GO:0003700 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0071479 GO:GO:0070888 GO:GO:0004402 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223 EMBL:AB019258
EMBL:AB019259 IPI:IPI00201128 IPI:IPI00205319 RefSeq:NP_068628.1
UniGene:Rn.205839 ProteinModelPortal:Q9WVS9 STRING:Q9WVS9
PhosphoSite:Q9WVS9 GeneID:60447 KEGG:rno:60447 UCSC:RGD:620271
InParanoid:Q9WVS9 NextBio:612192 ArrayExpress:Q9WVS9
Genevestigator:Q9WVS9 GermOnline:ENSRNOG00000002175 Uniprot:Q9WVS9
Length = 862
Score = 206 (77.6 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 56/194 (28%), Positives = 88/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 219 FKSLNSVSTSTHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 276
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 277 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQYGKGKS 336
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 337 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGVEESL 395
Query: 397 LDAGLNNSYFSDSD 410
+ + S S SD
Sbjct: 396 PETAADKSQDSGSD 409
>UNIPROTKB|Q9WVS9 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0009649
GO:GO:0016573 GO:GO:0003700 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0071479 GO:GO:0070888 GO:GO:0004402 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223 EMBL:AB019258
EMBL:AB019259 IPI:IPI00201128 IPI:IPI00205319 RefSeq:NP_068628.1
UniGene:Rn.205839 ProteinModelPortal:Q9WVS9 STRING:Q9WVS9
PhosphoSite:Q9WVS9 GeneID:60447 KEGG:rno:60447 UCSC:RGD:620271
InParanoid:Q9WVS9 NextBio:612192 ArrayExpress:Q9WVS9
Genevestigator:Q9WVS9 GermOnline:ENSRNOG00000002175 Uniprot:Q9WVS9
Length = 862
Score = 206 (77.6 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 56/194 (28%), Positives = 88/194 (45%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + + +A + TP +E P++E F
Sbjct: 219 FKSLNSVSTSTHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 276
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 277 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQYGKGKS 336
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 337 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGVEESL 395
Query: 397 LDAGLNNSYFSDSD 410
+ + S S SD
Sbjct: 396 PETAADKSQDSGSD 409
>ZFIN|ZDB-GENE-060607-11 [details] [associations]
symbol:epas1b "endothelial PAS domain protein 1b"
species:7955 "Danio rerio" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IGI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-060607-11 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0051402 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
OrthoDB:EOG4XPQF6 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 GeneTree:ENSGT00650000093281
EMBL:BX248102 EMBL:BC163440 IPI:IPI00742526 UniGene:Dr.83091
STRING:B3DJD1 Ensembl:ENSDART00000080382 OMA:YNSCPPR Uniprot:B3DJD1
Length = 834
Score = 205 (77.2 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 51/187 (27%), Positives = 88/187 (47%)
Query: 233 LDIRGRIKILHGQNRKL----EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +K+ +G ++ +EPPL + +C P PS ++ P F S+H +D+
Sbjct: 191 LHCTGHLKVCNGCPARVLCGFKEPPLTCVVMMCEPIVHPSNIDTPLDSKTFLSRHSMDMK 250
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY+ +L Y+ H D V +HQ L G + YR +
Sbjct: 251 YTYCDERVTELMGYNPEDLLGRSAYEFYHALDAENVTKSHQNLCTKGQAVSGQYRMLAKN 310
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSY 405
GG+ W++T ++Y +NS+P ++ + L + E + L+ +MD S N +
Sbjct: 311 GGYVWVETRGTVIYNSRNSQPQCIVCVNYVLSDVEEKSLIF--SMDQTESLFKPHKLNGF 368
Query: 406 FSDSDQL 412
FS + L
Sbjct: 369 FSPKEAL 375
>UNIPROTKB|F1PSD8 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071479 GO:GO:0070888 OMA:AHEKMAQ EMBL:AAEX03009082
Ensembl:ENSCAFT00000003400 Uniprot:F1PSD8
Length = 848
Score = 205 (77.2 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 56/194 (28%), Positives = 87/194 (44%)
Query: 221 YQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTP--FGPPSLLEIPHKEVMF 278
++S N S G I+ H + +A + TP +E P++E F
Sbjct: 220 FKSLNSVSTSAHNGFEGTIQRTHRPSYDDRVCFVATVRLATPQFIKEMCTVEEPNEE--F 277
Query: 279 KSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGM 338
S+H L+ + +D R ++GY E+ GYD H DDL +A H+ L++ G
Sbjct: 278 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKS 337
Query: 339 IAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSY 396
YRF T W WLQT + Y NS+P+F++ TH + E R +R + + S
Sbjct: 338 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AERRRELGIEESL 396
Query: 397 LDAGLNNSYFSDSD 410
+ + S S SD
Sbjct: 397 PETAADKSQDSGSD 410
>MGI|MGI:99698 [details] [associations]
symbol:Clock "circadian locomotor output cycles kaput"
species:10090 "Mus musculus" [GO:0000077 "DNA damage checkpoint"
evidence=ISO] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO] [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA;IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IDA;IMP]
[GO:0008134 "transcription factor binding" evidence=ISA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016746
"transferase activity, transferring acyl groups" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IC;ISO;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:99698 GO:GO:0005829 GO:GO:0000077 GO:GO:0005694
GO:GO:0009649 GO:GO:0016573 GO:GO:0005667 GO:GO:0000978
GO:GO:0001077 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0071479 GO:GO:0070888
Reactome:REACT_109335 Reactome:REACT_24972 PDB:4F3L PDBsum:4F3L
GO:GO:0004402 CTD:9575 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 OMA:AHEKMAQ OrthoDB:EOG476JZV
EMBL:AF000998 EMBL:AF146793 IPI:IPI00230536 IPI:IPI00420596
RefSeq:NP_031741.1 UniGene:Mm.3552 UniGene:Mm.392894
ProteinModelPortal:O08785 SMR:O08785 DIP:DIP-30958N IntAct:O08785
MINT:MINT-4654078 STRING:O08785 PhosphoSite:O08785 PRIDE:O08785
DNASU:12753 Ensembl:ENSMUST00000075159 GeneID:12753 KEGG:mmu:12753
InParanoid:O08785 NextBio:282092 Bgee:O08785 CleanEx:MM_CLOCK
Genevestigator:O08785 GermOnline:ENSMUSG00000029238 Uniprot:O08785
Length = 855
Score = 203 (76.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPETAADKSQDSGSD 409
>UNIPROTKB|F1RVI1 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CU861936 Ensembl:ENSSSCT00000009755
OMA:ANARRAW Uniprot:F1RVI1
Length = 410
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 382
>UNIPROTKB|F1P5G3 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 IPI:IPI00575691
EMBL:AADN02017717 Ensembl:ENSGALT00000027080 ArrayExpress:F1P5G3
Uniprot:F1P5G3
Length = 815
Score = 201 (75.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/151 (33%), Positives = 76/151 (50%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 243 IVEEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 300
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPL----MEEEG 381
+ L++ G YRF T W WLQT + Y NSKP+F++ TH + + E
Sbjct: 301 EHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHMVVSYADVRVER 360
Query: 382 RDLLGKRTMDFKVSYLDAGLNNSYFS-DSDQ 411
R +G + +V + + L +S S D DQ
Sbjct: 361 RQEMGLEEVSSEV--VSSALKDSGSSLDPDQ 389
>UNIPROTKB|Q5ZQU2 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048511
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 HSSP:Q99814 EMBL:AF396828 EMBL:AF193071
IPI:IPI00575691 RefSeq:NP_001025713.1 UniGene:Gga.235
ProteinModelPortal:Q5ZQU2 STRING:Q5ZQU2 GeneID:395433
KEGG:gga:395433 CTD:4862 KO:K09026 NextBio:20815517 Uniprot:Q5ZQU2
Length = 815
Score = 201 (75.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 48/150 (32%), Positives = 74/150 (49%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 243 IVEEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 300
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLL 385
+ L++ G YRF T W WLQT + Y NSKP+F++ TH M D+
Sbjct: 301 EHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH---MVVSYADVR 357
Query: 386 GKRTMDFKVSYLDAGLNNSYFSDS-DQLTP 414
+R + + + + + +S DS L P
Sbjct: 358 VERRQEMGLEEVSSEVVSSALKDSGSSLDP 387
>UNIPROTKB|E1BZV0 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0042745 "circadian
sleep/wake cycle" evidence=IEA] [GO:0045475 "locomotor rhythm"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:AADN02017717
IPI:IPI00823351 Ensembl:ENSGALT00000036585 ArrayExpress:E1BZV0
Uniprot:E1BZV0
Length = 817
Score = 201 (75.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/151 (33%), Positives = 76/151 (50%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
++E P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 245 IVEEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 302
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPL----MEEEG 381
+ L++ G YRF T W WLQT + Y NSKP+F++ TH + + E
Sbjct: 303 EHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHMVVSYADVRVER 362
Query: 382 RDLLGKRTMDFKVSYLDAGLNNSYFS-DSDQ 411
R +G + +V + + L +S S D DQ
Sbjct: 363 RQEMGLEEVSSEV--VSSALKDSGSSLDPDQ 391
>ZFIN|ZDB-GENE-030408-3 [details] [associations]
symbol:npas2 "neuronal PAS domain protein 2"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA;IPI] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0009648
"photoperiodism" evidence=IEP] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0009416 "response to light stimulus"
evidence=IGI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-030408-3 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009648 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 HSSP:Q99814 CTD:4862 OrthoDB:EOG444KJQ
OMA:GHPRKMD EMBL:CU464080 EMBL:BC163256 EMBL:AB087255
IPI:IPI00505783 RefSeq:NP_840084.1 UniGene:Dr.24959 STRING:Q8JIG3
Ensembl:ENSDART00000014806 GeneID:352934 KEGG:dre:352934
InParanoid:Q8JIG3 NextBio:20812676 Uniprot:Q8JIG3
Length = 845
Score = 200 (75.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 39/107 (36%), Positives = 56/107 (52%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A H++L++ G
Sbjct: 287 FTSRHSLEWKFLFLDHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQCGKGK 346
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
YRF T W WLQT + Y NSKP+F++ TH + E R
Sbjct: 347 SCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVR 393
>UNIPROTKB|F1NKI9 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AADN02031315
EMBL:AADN02031314 IPI:IPI00581385 Ensembl:ENSGALT00000037539
ArrayExpress:F1NKI9 Uniprot:F1NKI9
Length = 854
Score = 199 (75.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPEIKADKSQDSGSD 409
>UNIPROTKB|F1NKI8 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AADN02031315
EMBL:AADN02031314 IPI:IPI01017404 Ensembl:ENSGALT00000037540
ArrayExpress:F1NKI8 Uniprot:F1NKI8
Length = 859
Score = 199 (75.1 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 270 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 327
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 328 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 386
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 387 RRELGIEESLPEIKADKSQDSGSD 410
>UNIPROTKB|Q8QGQ6 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0071479
"cellular response to ionizing radiation" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0005667
GO:GO:0000978 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 GO:GO:0071479 GO:GO:0070888 EMBL:AF132531 EMBL:AF144425
EMBL:AF246959 IPI:IPI00814237 IPI:IPI00819507 RefSeq:NP_989505.2
UniGene:Gga.2707 ProteinModelPortal:Q8QGQ6 STRING:Q8QGQ6
GeneID:373991 KEGG:gga:373991 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 InParanoid:Q8QGQ6 KO:K02223
NextBio:20813520 ArrayExpress:Q8QGQ6 Uniprot:Q8QGQ6
Length = 875
Score = 199 (75.1 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPEIKADKSQDSGSD 409
>UNIPROTKB|F1P1C0 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0071479 "cellular response to ionizing radiation" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0000077 GO:GO:0005694 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0071479 GO:GO:0070888 IPI:IPI00819507
OMA:AHEKMAQ EMBL:AADN02031315 EMBL:AADN02031314
Ensembl:ENSGALT00000022394 ArrayExpress:F1P1C0 Uniprot:F1P1C0
Length = 877
Score = 199 (75.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 269 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHE 326
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 327 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AER 385
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD 410
+R + + S + + S S SD
Sbjct: 386 RRELGIEESLPEIKADKSQDSGSD 409
>ZFIN|ZDB-GENE-990630-14 [details] [associations]
symbol:clock "clock" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;IMP] [GO:0046982
"protein heterodimerization activity" evidence=NAS] [GO:0009648
"photoperiodism" evidence=IEP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IGI;IMP]
[GO:0009416 "response to light stimulus" evidence=IGI;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009266 "response to temperature stimulus" evidence=IDA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-990630-14 GO:GO:0005737 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0009266 GO:GO:0009648 CTD:9575 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 HSSP:Q99814 EMBL:AF133306
IPI:IPI00503983 RefSeq:NP_571032.1 UniGene:Dr.81289
ProteinModelPortal:Q9W6J4 DIP:DIP-46451N STRING:Q9W6J4 GeneID:30140
KEGG:dre:30140 InParanoid:Q9W6J4 NextBio:20806615
ArrayExpress:Q9W6J4 Uniprot:Q9W6J4
Length = 893
Score = 199 (75.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 49/150 (32%), Positives = 75/150 (50%)
Query: 269 LEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQ 328
+E P++E F S+H L+ + +D R ++GY E+ GYD H DDL +A H+
Sbjct: 260 VEEPNEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHE 317
Query: 329 ELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGRDLLG 386
L++ G YRF T W WLQT + Y NS+P+F++ TH + E R
Sbjct: 318 HLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR-AEQ 376
Query: 387 KRTMDFKVSYLDAGLNNSYFSDSD-QLTPS 415
+R + + S + + S S S+ QL S
Sbjct: 377 RRELGIEESPPEISADKSQDSGSESQLNTS 406
>FB|FBgn0023076 [details] [associations]
symbol:Clk "Clock" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IDA;NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;NAS;TAS]
[GO:0007623 "circadian rhythm" evidence=NAS;IMP;TAS] [GO:0046982
"protein heterodimerization activity" evidence=NAS;IPI] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=NAS] [GO:0048148
"behavioral response to cocaine" evidence=NAS;TAS] [GO:0045475
"locomotor rhythm" evidence=IMP;NAS;TAS] [GO:0008062 "eclosion
rhythm" evidence=NAS;TAS] [GO:0045187 "regulation of circadian
sleep/wake cycle, sleep" evidence=IMP] [GO:0007622 "rhythmic
behavior" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IDA;NAS;TAS] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0032922
"circadian regulation of gene expression" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF00010 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0003677
GO:GO:0045187 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 GO:GO:0046982
GO:GO:0048148 GO:GO:0045475 GO:GO:0032922 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG300360 KO:K02223 EMBL:AF065133 EMBL:AF069997
EMBL:AF067207 PIR:T13062 PIR:T13068 PIR:T13071
RefSeq:NP_001014574.1 RefSeq:NP_001014576.1 RefSeq:NP_523964.2
UniGene:Dm.7596 ProteinModelPortal:O61735 SMR:O61735 IntAct:O61735
MINT:MINT-7025605 STRING:O61735 PaxDb:O61735
EnsemblMetazoa:FBtr0100132 GeneID:38872 KEGG:dme:Dmel_CG7391
UCSC:CG7391-RA CTD:363233 FlyBase:FBgn0023076 InParanoid:O61735
OMA:IVACHEE OrthoDB:EOG4HHMHD PhylomeDB:O61735 GenomeRNAi:38872
NextBio:810786 Bgee:O61735 GermOnline:CG7391 GO:GO:0008062
Uniprot:O61735
Length = 1027
Score = 207 (77.9 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 39/99 (39%), Positives = 55/99 (55%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F SKH ++ + +D R ++GY E+ GYD H+DDL + + H+EL +TG
Sbjct: 267 FTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGK 326
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHR 374
YRF T W WLQT + Y NSKPD+V+ TH+
Sbjct: 327 SCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHK 365
Score = 40 (19.1 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 9/38 (23%), Positives = 22/38 (57%)
Query: 562 ADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLM 599
+D S+ S ++ ++H S LV + +++ Q+Q++
Sbjct: 934 SDDGSETQSE--DNKMMHTSGSNLVQQQQQQQQQQQIL 969
>UNIPROTKB|F1NGR0 [details] [associations]
symbol:F1NGR0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AADN02013650 EMBL:AADN02013651 IPI:IPI00577457
Ensembl:ENSGALT00000014751 OMA:GHPRKMD Uniprot:F1NGR0
Length = 675
Score = 195 (73.7 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 45/132 (34%), Positives = 63/132 (47%)
Query: 247 RKLEEPPLALFAICTPFGPPSLLEIPHKEVM---FKSKHKLDLSLVSMDQRGKMLLGYSD 303
R E + L A P L E+ + E F S+H L+ + +D R ++GY
Sbjct: 221 RSATEEQICLVATVRLVTPQFLKELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLP 280
Query: 304 TELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK- 362
E+ GYD H DDL +A H+ L++ G YRF T W WLQT + Y
Sbjct: 281 FEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQ 340
Query: 363 -NSKPDFVISTH 373
NSKP+F++ TH
Sbjct: 341 WNSKPEFIVCTH 352
>UNIPROTKB|J9P4Q7 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03007435
Ensembl:ENSCAFT00000047996 Uniprot:J9P4Q7
Length = 668
Score = 199 (75.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 40/108 (37%), Positives = 58/108 (53%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
+++ P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 234 IVDEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 291
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
Q L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 292 QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 339
Score = 38 (18.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 61 PTYEVNKSNDCDKLYCHQTLTADQNSKGYSS-PYI 94
P+ E KS++ + YCH L N K + + YI
Sbjct: 146 PSPEYLKSDNDLEFYCH-LLRGSLNPKEFPTYEYI 179
>UNIPROTKB|F6QL92 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045475 "locomotor
rhythm" evidence=IEA] [GO:0042745 "circadian sleep/wake cycle"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0045475 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042745 OMA:KFVGNFR EMBL:DAAA02030201 IPI:IPI00706386
Ensembl:ENSBTAT00000026257 Uniprot:F6QL92
Length = 794
Score = 200 (75.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 42/117 (35%), Positives = 61/117 (52%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
+++ P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 233 IVDEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLELLARCH 290
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
Q L++ G YRF T W WLQT + Y NSKP+F++ TH + E R
Sbjct: 291 QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVR 347
Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 61 PTYEVNKSNDCDKLYCHQTLTADQNSKGYSS-PYI 94
P+ E KS++ + YCH L N K + + YI
Sbjct: 145 PSPEYLKSDNDLEFYCH-LLRGSLNPKEFPTYEYI 178
>UNIPROTKB|F1STF9 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:CU407191
EMBL:CU972480 Ensembl:ENSSSCT00000008948 Uniprot:F1STF9
Length = 796
Score = 200 (75.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 42/117 (35%), Positives = 61/117 (52%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
+++ P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 243 IVDEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLELLARCH 300
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTHRPLMEEEGR 382
Q L++ G YRF T W WLQT + Y NSKP+F++ TH + E R
Sbjct: 301 QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVR 357
Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 61 PTYEVNKSNDCDKLYCHQTLTADQNSKGYSS-PYI 94
P+ E KS++ + YCH L N K + + YI
Sbjct: 155 PSPEYLKSDNDLEFYCH-LLRGSLNPKEFPTYEYI 188
>UNIPROTKB|F1PPU8 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:AAEX03007435
Ensembl:ENSCAFT00000003487 Uniprot:F1PPU8
Length = 818
Score = 199 (75.1 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 40/108 (37%), Positives = 58/108 (53%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
+++ P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 243 IVDEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 300
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
Q L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 301 QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
Score = 38 (18.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 61 PTYEVNKSNDCDKLYCHQTLTADQNSKGYSS-PYI 94
P+ E KS++ + YCH L N K + + YI
Sbjct: 155 PSPEYLKSDNDLEFYCH-LLRGSLNPKEFPTYEYI 188
>RGD|1309681 [details] [associations]
symbol:Npas2 "neuronal PAS domain protein 2" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0042745 "circadian
sleep/wake cycle" evidence=IEA;ISO] [GO:0045475 "locomotor rhythm"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA;ISO] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:1309681 GO:GO:0005737
GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0045475 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:4862 KO:K09026 GO:GO:0042745 IPI:IPI00870127
RefSeq:NP_001101684.2 UniGene:Rn.8285 Ensembl:ENSRNOT00000059571
GeneID:316351 KEGG:rno:316351 UCSC:RGD:1309681 NextBio:670757
Uniprot:F1MAG2
Length = 816
Score = 198 (74.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 38/98 (38%), Positives = 52/98 (53%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GYD H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
Score = 38 (18.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 61 PTYEVNKSNDCDKLYCHQTLTADQNSKGYSS-PYI 94
P+ E KS++ + YCH L N K + + YI
Sbjct: 155 PSPEFLKSDNDLEFYCH-LLRGSLNPKEFPTYEYI 188
>UNIPROTKB|Q99743 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0042745 "circadian sleep/wake
cycle" evidence=IEA] [GO:0045475 "locomotor rhythm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0007417 "central nervous system development" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0051879 "Hsp90 protein
binding" evidence=IDA] Reactome:REACT_111217 InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005829
GO:GO:0044281 GO:GO:0003677 GO:GO:0045944 GO:GO:0007417
GO:GO:0003700 GO:GO:0044255 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 MIM:608516 GO:GO:0045475 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0051879
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
eggNOG:NOG300360 HOVERGEN:HBG050997 CTD:4862 KO:K09026 EMBL:U77970
EMBL:AC016738 EMBL:AC092168 EMBL:AC106891 EMBL:BC051351
EMBL:BC072383 EMBL:U51625 IPI:IPI00956556 RefSeq:NP_002509.2
UniGene:Hs.156832 UniGene:Hs.705895 ProteinModelPortal:Q99743
SMR:Q99743 IntAct:Q99743 STRING:Q99743 PhosphoSite:Q99743
DMDM:311033423 PaxDb:Q99743 PRIDE:Q99743 Ensembl:ENST00000335681
GeneID:4862 KEGG:hsa:4862 UCSC:uc002tap.1 GeneCards:GC02P101436
H-InvDB:HIX0200274 HGNC:HGNC:7895 HPA:HPA019674 MIM:603347
neXtProt:NX_Q99743 PharmGKB:PA31696 InParanoid:Q99743
OrthoDB:EOG444KJQ PhylomeDB:Q99743 ChiTaRS:NPAS2 GenomeRNAi:4862
NextBio:18730 ArrayExpress:Q99743 Bgee:Q99743 CleanEx:HS_NPAS2
Genevestigator:Q99743 GermOnline:ENSG00000170485 GO:GO:0042745
Uniprot:Q99743
Length = 824
Score = 199 (75.1 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 40/108 (37%), Positives = 58/108 (53%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
+++ P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 243 IVDEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 300
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
Q L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 301 QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
Score = 37 (18.1 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 61 PTYEVNKSNDCDKLYCHQTLTADQNSKGYSS-PYI 94
P+ E KS+ + YCH L N K + + YI
Sbjct: 155 PSPEYLKSDSDLEFYCH-LLRGSLNPKEFPTYEYI 188
>UNIPROTKB|F5H027 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 IPI:IPI00916781
ProteinModelPortal:F5H027 SMR:F5H027 Ensembl:ENST00000542504
UCSC:uc010yvt.1 OMA:KFVGNFR ArrayExpress:F5H027 Bgee:F5H027
Uniprot:F5H027
Length = 889
Score = 199 (75.1 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 40/108 (37%), Positives = 58/108 (53%)
Query: 268 LLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAH 327
+++ P +E F S+H L+ + +D R ++GY E+ GYD H DDL +A H
Sbjct: 308 IVDEPLEE--FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH 365
Query: 328 QELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
Q L++ G YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 366 QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 413
Score = 37 (18.1 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 61 PTYEVNKSNDCDKLYCHQTLTADQNSKGYSS-PYI 94
P+ E KS+ + YCH L N K + + YI
Sbjct: 220 PSPEYLKSDSDLEFYCH-LLRGSLNPKEFPTYEYI 253
>MGI|MGI:109169 [details] [associations]
symbol:Epas1 "endothelial PAS domain protein 1" species:10090
"Mus musculus" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=ISO;IMP] [GO:0001892 "embryonic
placenta development" evidence=IGI] [GO:0001974 "blood vessel
remodeling" evidence=IMP] [GO:0002027 "regulation of heart rate"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IGI;ISO;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IGI;IMP]
[GO:0007005 "mitochondrion organization" evidence=IMP] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007601 "visual
perception" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO;IPI] [GO:0030097 "hemopoiesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IGI] [GO:0030218
"erythrocyte differentiation" evidence=IMP] [GO:0030324 "lung
development" evidence=IMP] [GO:0035035 "histone acetyltransferase
binding" evidence=ISO] [GO:0042415 "norepinephrine metabolic
process" evidence=IMP] [GO:0043129 "surfactant homeostasis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IGI;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IMP;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IPI] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0048469 "cell maturation" evidence=IMP]
[GO:0048625 "myoblast cell fate commitment" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:109169
GO:GO:0005737 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0043565 GO:GO:0001666 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0035035 GO:GO:0001892 GO:GO:0043619
GO:GO:0042415 GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OMA:QYQDYSL
OrthoDB:EOG4XPQF6 ChiTaRS:EPAS1 GO:GO:0048625 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:U81983
EMBL:D89787 EMBL:AF045160 IPI:IPI00312615 RefSeq:NP_034267.3
UniGene:Mm.1415 ProteinModelPortal:P97481 SMR:P97481 DIP:DIP-46109N
STRING:P97481 PhosphoSite:P97481 PRIDE:P97481
Ensembl:ENSMUST00000024954 GeneID:13819 KEGG:mmu:13819
UCSC:uc008duj.2 GeneTree:ENSGT00650000093281 InParanoid:P97481
NextBio:284608 Bgee:P97481 CleanEx:MM_EPAS1 Genevestigator:P97481
GermOnline:ENSMUSG00000024140 Uniprot:P97481
Length = 874
Score = 188 (71.2 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 51/174 (29%), Positives = 79/174 (45%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELIGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLN--NSYFSDSDQLTPSHQT 418
++ + L E E D++ +MD S L NS F SD + + ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVVF--SMDQTESLFKPHLMAMNSIFDSSDDVAVTEKS 386
>RGD|68404 [details] [associations]
symbol:Epas1 "endothelial PAS domain protein 1" species:10116
"Rattus norvegicus" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0001666 "response to hypoxia" evidence=ISO;IDA;TAS] [GO:0001892
"embryonic placenta development" evidence=ISO] [GO:0001974 "blood
vessel remodeling" evidence=ISO] [GO:0002027 "regulation of heart
rate" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006979 "response
to oxidative stress" evidence=ISO] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0007601 "visual perception"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030154
"cell differentiation" evidence=IEA;ISO] [GO:0030218 "erythrocyte
differentiation" evidence=ISO] [GO:0030324 "lung development"
evidence=ISO] [GO:0035035 "histone acetyltransferase binding"
evidence=ISO] [GO:0042415 "norepinephrine metabolic process"
evidence=ISO] [GO:0043129 "surfactant homeostasis" evidence=ISO]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048469 "cell maturation" evidence=ISO]
[GO:0048625 "myoblast cell fate commitment" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:68404 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0030324 GO:GO:0007601 GO:GO:0001666
GO:GO:0045944 GO:GO:0003700 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0001892 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OrthoDB:EOG4XPQF6
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 EMBL:AJ277828 IPI:IPI00199803 RefSeq:NP_075578.1
UniGene:Rn.55138 ProteinModelPortal:Q9JHS1 SMR:Q9JHS1 STRING:Q9JHS1
PRIDE:Q9JHS1 GeneID:29452 KEGG:rno:29452 UCSC:RGD:68404
InParanoid:Q9JHS1 NextBio:609218 ArrayExpress:Q9JHS1
Genevestigator:Q9JHS1 GermOnline:ENSRNOG00000021318 Uniprot:Q9JHS1
Length = 874
Score = 188 (71.2 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 50/172 (29%), Positives = 75/172 (43%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELVGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T +VY +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVVYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQT 418
++ + L E E D++ S NS F SD + S ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVVVSMDQTESCSSHTLMAMNSIFDTSDDVALSEKS 386
>UNIPROTKB|Q9JHS1 [details] [associations]
symbol:Epas1 "Endothelial PAS domain-containing protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:68404 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0001666 GO:GO:0045944 GO:GO:0003700 GO:GO:0001525
GO:GO:0005667 GO:GO:0001077 GO:GO:0004871 GO:GO:0001974
GO:GO:0030218 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007005 GO:GO:0002027 GO:GO:0001892 GO:GO:0043619
GO:GO:0042415 GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OrthoDB:EOG4XPQF6
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 EMBL:AJ277828 IPI:IPI00199803 RefSeq:NP_075578.1
UniGene:Rn.55138 ProteinModelPortal:Q9JHS1 SMR:Q9JHS1 STRING:Q9JHS1
PRIDE:Q9JHS1 GeneID:29452 KEGG:rno:29452 UCSC:RGD:68404
InParanoid:Q9JHS1 NextBio:609218 ArrayExpress:Q9JHS1
Genevestigator:Q9JHS1 GermOnline:ENSRNOG00000021318 Uniprot:Q9JHS1
Length = 874
Score = 188 (71.2 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 50/172 (29%), Positives = 75/172 (43%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELVGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T +VY +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVVYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQT 418
++ + L E E D++ S NS F SD + S ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVVVSMDQTESCSSHTLMAMNSIFDTSDDVALSEKS 386
>UNIPROTKB|F1NJK2 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 IPI:IPI00597728
EMBL:AADN02003885 EMBL:AADN02003886 Ensembl:ENSGALT00000019364
ArrayExpress:F1NJK2 Uniprot:F1NJK2
Length = 810
Score = 186 (70.5 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 41/139 (29%), Positives = 67/139 (48%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E+P F S+H LD+ D+R L+GY EL
Sbjct: 212 KKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 271
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 272 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQP 331
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L +DL+
Sbjct: 332 QCIVCVNYVLSGIVQKDLI 350
>UNIPROTKB|F1NQK5 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0061030 "epithelial
cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0071347 "cellular response
to interleukin-1" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001755 "neural crest
cell migration" evidence=IEA] [GO:0001837 "epithelial to
mesenchymal transition" evidence=IEA] [GO:0001892 "embryonic
placenta development" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0002248 "connective tissue
replacement involved in inflammatory response wound healing"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006089 "lactate metabolic process"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IEA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0014850 "response to muscle activity"
evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021502 "neural fold elevation formation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032007
"negative regulation of TOR signaling cascade" evidence=IEA]
[GO:0032364 "oxygen homeostasis" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0030154 GO:GO:0005730 GO:GO:0035774
GO:GO:0006110 GO:GO:0043565 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0042593 GO:GO:0032007
GO:GO:0006879 GO:GO:0005667 GO:GO:0003705 GO:GO:0042127
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0014850
GO:GO:0030949 GO:GO:0071347 GO:GO:0010634 GO:GO:0046886
GO:GO:0043619 GO:GO:0030502 GO:GO:0042541 GO:GO:0000988
GO:GO:0006089 GO:GO:0010870 GO:GO:0032364 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 OMA:QNAQRKR GO:GO:0001922
GO:GO:0051541 GO:GO:2001054 GO:GO:0032909 EMBL:AADN02003885
EMBL:AADN02003886 IPI:IPI00822528 Ensembl:ENSGALT00000037380
ArrayExpress:F1NQK5 Uniprot:F1NQK5
Length = 811
Score = 186 (70.5 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 41/139 (29%), Positives = 67/139 (48%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E+P F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L +DL+
Sbjct: 333 QCIVCVNYVLSGIVQKDLI 351
>UNIPROTKB|Q9YIB9 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0035035 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 OrthoDB:EOG40CHGP EMBL:AB013746
IPI:IPI00597728 PIR:JC7619 RefSeq:NP_989628.1 UniGene:Gga.4933
ProteinModelPortal:Q9YIB9 SMR:Q9YIB9 STRING:Q9YIB9 PRIDE:Q9YIB9
GeneID:374177 KEGG:gga:374177 CTD:3091 KO:K08268 NextBio:20813683
Uniprot:Q9YIB9
Length = 811
Score = 186 (70.5 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 41/139 (29%), Positives = 67/139 (48%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +E+P F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L +DL+
Sbjct: 333 QCIVCVNYVLSGIVQKDLI 351
>ZFIN|ZDB-GENE-030131-4490 [details] [associations]
symbol:epas1a "endothelial PAS domain protein 1a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-030131-4490 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CR931998 IPI:IPI00499388
Ensembl:ENSDART00000024415 ArrayExpress:E7FAJ1 Bgee:E7FAJ1
Uniprot:E7FAJ1
Length = 842
Score = 186 (70.5 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 40/138 (28%), Positives = 66/138 (47%)
Query: 251 EPPLALFA-ICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL +C P PS ++ P F S+H +D+ + D+R L+GY EL
Sbjct: 215 EPPLTCITMLCAPIPHPSNVDTPLDSKTFMSRHSMDMKFIYCDERVSSLIGYRPEELLGR 274
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPD 367
Y+ H D + +HQ L G YR +GG+ W++T + ++Y +NS+P
Sbjct: 275 SVYEFCHALDSENMTKSHQNLCNKGQVVSGQYRMLAKNGGYVWVETQATVIYNNRNSQPQ 334
Query: 368 FVISTHRPLMEEEGRDLL 385
+I + L E + ++
Sbjct: 335 CIICINYILSSVEEQSVI 352
>MGI|MGI:109232 [details] [associations]
symbol:Npas2 "neuronal PAS domain protein 2" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0042745 "circadian sleep/wake
cycle" evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:109232 GO:GO:0005829 GO:GO:0005654 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GO:GO:0045475 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:NOG300360 HOGENOM:HOG000234382 HOVERGEN:HBG050997 CTD:4862
KO:K09026 OrthoDB:EOG444KJQ GO:GO:0042745 EMBL:U77969
IPI:IPI00625137 RefSeq:NP_032745.2 UniGene:Mm.2380
ProteinModelPortal:P97460 SMR:P97460 STRING:P97460
PhosphoSite:P97460 PRIDE:P97460 GeneID:18143 KEGG:mmu:18143
UCSC:uc007atd.2 InParanoid:P97460 NextBio:293396 CleanEx:MM_NPAS2
Genevestigator:P97460 GermOnline:ENSMUSG00000026077 Uniprot:P97460
Length = 816
Score = 193 (73.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 278 FKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASG 337
F S+H L+ + +D R ++GY E+ GY+ H DDL +A HQ L++ G
Sbjct: 251 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYNYYHIDDLELLARCHQHLMQFGKGK 310
Query: 338 MIAYRFQTNDGGWQWLQTSSRLVYK--NSKPDFVISTH 373
YRF T W WLQT + Y NSKP+F++ TH
Sbjct: 311 SCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTH 348
Score = 38 (18.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 61 PTYEVNKSNDCDKLYCHQTLTADQNSKGYSS-PYI 94
P+ E KS++ + YCH L N K + + YI
Sbjct: 155 PSPEFLKSDNDLEFYCH-LLRGSLNPKEFPTYEYI 188
>UNIPROTKB|F1NG41 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001892 "embryonic
placenta development" evidence=IEA] [GO:0001974 "blood vessel
remodeling" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0035035 "histone
acetyltransferase binding" evidence=IEA] [GO:0042415
"norepinephrine metabolic process" evidence=IEA] [GO:0043129
"surfactant homeostasis" evidence=IEA] [GO:0043619 "regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0048625 "myoblast cell fate
commitment" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
GO:GO:0005667 GO:GO:0001077 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0043619 GO:GO:0042415 OMA:QYQDYSL InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:AADN02011973 IPI:IPI00572997
Ensembl:ENSGALT00000016253 ArrayExpress:F1NG41 Uniprot:F1NG41
Length = 859
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 43/139 (30%), Positives = 64/139 (46%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 206 KEPLLTCLIIMCEPIQHPSNIDIPLDSKTFMSRHSMDMKFTYCDDRITELIGYHPEELLG 265
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 266 RSAYEFYHALDSENMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQGTVIYNTRNLQP 325
Query: 367 DFVISTHRPLMEEEGRDLL 385
+I + L E E D++
Sbjct: 326 QCIICVNYVLSEIEKNDIV 344
>UNIPROTKB|F1S5K9 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043619 "regulation
of transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043129 "surfactant
homeostasis" evidence=IEA] [GO:0042415 "norepinephrine metabolic
process" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0030324
GO:GO:0007601 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0001892 GO:GO:0043619 GO:GO:0042415 GO:GO:0048469
GO:GO:0043129 OMA:QYQDYSL GO:GO:0048625 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CU570958
Ensembl:ENSSSCT00000009245 Uniprot:F1S5K9
Length = 863
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 51/174 (29%), Positives = 80/174 (45%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 207 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLG 266
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 267 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 326
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLN--NSYFSDSDQLTPSHQT 418
++ + L E E D++ +MD S L NS F +S ++ S ++
Sbjct: 327 QCIMCVNYVLSEIEKNDVVF--SMDQTESPFKPHLMAMNSIFDNSGKVPVSEKS 378
>UNIPROTKB|A5PJT1 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043619 "regulation
of transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043129 "surfactant
homeostasis" evidence=IEA] [GO:0042415 "norepinephrine metabolic
process" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0030324
GO:GO:0007601 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0001892 GO:GO:0043619 GO:GO:0042415 GO:GO:0048469
GO:GO:0043129 HOGENOM:HOG000234306 HOVERGEN:HBG060456 OMA:QYQDYSL
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 EMBL:DAAA02030718
EMBL:DAAA02030719 EMBL:BC142229 IPI:IPI00718553 UniGene:Bt.45570
SMR:A5PJT1 STRING:A5PJT1 Ensembl:ENSBTAT00000004836
InParanoid:A5PJT1 Uniprot:A5PJT1
Length = 870
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 51/174 (29%), Positives = 80/174 (45%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELVGYHPQELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGL--NNSYFSDSDQLTPSHQT 418
++ + L E E D++ +MD S L NS F +S ++ S ++
Sbjct: 335 QCIMCVNYVLSEIEKNDVVF--SMDQTESPFKPHLLTMNSIFDNSGKVAVSEKS 386
>UNIPROTKB|Q0PGG7 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:30521 "Bos grunniens" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0019896 "axon
transport of mitochondrion" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0071456 "cellular response to hypoxia" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0071456 GO:GO:0003700
GO:GO:0006351 GO:GO:0044212 GO:GO:0004871 GO:GO:0019896
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0035035 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:DQ838046
EMBL:AY621118 ProteinModelPortal:Q0PGG7 SMR:Q0PGG7 Uniprot:Q0PGG7
Length = 823
Score = 183 (69.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKKGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>ZFIN|ZDB-GENE-040426-706 [details] [associations]
symbol:hif1ab "hypoxia-inducible factor 1, alpha
subunit (basic helix-loop-helix transcription factor) b"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-040426-706 GO:GO:0005634 GO:GO:0003677 GO:GO:0051402
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 OrthoDB:EOG40CHGP OMA:QNAQRKR
EMBL:BX255914 EMBL:AY326951 IPI:IPI00491851 UniGene:Dr.75612
SMR:Q6EHI4 STRING:Q6EHI4 Ensembl:ENSDART00000018500
InParanoid:Q6EHI4 Uniprot:Q6EHI4
Length = 777
Score = 192 (72.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 43/145 (29%), Positives = 70/145 (48%)
Query: 233 LDIRGRIKILHG----QNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
L G +++ G ++ +EPP+ L IC P PS +E+P F S+H LD+
Sbjct: 192 LHCAGHVRVHEGSEASEDSGFKEPPVTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMK 251
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
D+R L+GY +L N Y+ H D ++ H L G + YR
Sbjct: 252 FSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKK 311
Query: 348 GGWQWLQTSSRLVY--KNSKPDFVI 370
GG+ W++T + ++Y KNS+P ++
Sbjct: 312 GGFVWVETQATVIYNPKNSQPQCIV 336
Score = 37 (18.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 588 SEDREELQRQLMWNSFLPPESAGISLQECFL 618
SE+ EE +L PES SL+ L
Sbjct: 368 SEETEEKTSELDILKLFKPESLNCSLESSTL 398
>UNIPROTKB|A0JND0 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9913 "Bos taurus" [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0061419
"positive regulation of transcription from RNA polymerase II
promoter in response to hypoxia" evidence=IEA] [GO:0061298 "retina
vasculature development in camera-type eye" evidence=IEA]
[GO:0061030 "epithelial cell differentiation involved in mammary
gland alveolus development" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0051541 "elastin metabolic
process" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0046886 "positive regulation of hormone
biosynthetic process" evidence=IEA] [GO:0046716 "muscle cell
homeostasis" evidence=IEA] [GO:0045926 "negative regulation of
growth" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032364 "oxygen homeostasis" evidence=IEA]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0030502 "negative regulation of bone mineralization"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021502 "neural fold elevation formation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019896 "axon transport of mitochondrion" evidence=IEA]
[GO:0014850 "response to muscle activity" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010573
"vascular endothelial growth factor production" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006089 "lactate metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0002248 "connective tissue replacement involved
in inflammatory response wound healing" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0043565 GO:GO:0008542 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0001525 GO:GO:0042593
GO:GO:0032007 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
GO:GO:0061298 GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0014850 GO:GO:0001837
GO:GO:0030949 GO:GO:0071347 GO:GO:0003151 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
UniGene:Bt.4184 CTD:3091 KO:K08268 OMA:QNAQRKR GO:GO:0001922
GO:GO:0032963 GO:GO:0002248 GO:GO:0051541 GO:GO:0060574
GO:GO:2001054 GO:GO:0021502 GO:GO:0032909 GO:GO:0010573
EMBL:DAAA02029320 EMBL:BC126622 IPI:IPI00825226 RefSeq:NP_776764.2
SMR:A0JND0 STRING:A0JND0 Ensembl:ENSBTAT00000027885 GeneID:281814
KEGG:bta:281814 InParanoid:A0JND0 NextBio:20805726 Uniprot:A0JND0
Length = 823
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|Q9XTA5 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9913 "Bos taurus" [GO:0019896 "axon transport of
mitochondrion" evidence=ISS] [GO:0071456 "cellular response to
hypoxia" evidence=ISS] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0071456 GO:GO:0003700 GO:GO:0006351
GO:GO:0044212 GO:GO:0004871 GO:GO:0019896 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:AB018398
IPI:IPI00689122 UniGene:Bt.4184 ProteinModelPortal:Q9XTA5
SMR:Q9XTA5 STRING:Q9XTA5 PRIDE:Q9XTA5 InParanoid:Q9XTA5
OrthoDB:EOG40CHGP Uniprot:Q9XTA5
Length = 823
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|Q52RL7 [details] [associations]
symbol:Q52RL7 "Hypoxia inducible factor-1 alpha"
species:59538 "Pantholops hodgsonii" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AY971808 ProteinModelPortal:Q52RL7
SMR:Q52RL7 Uniprot:Q52RL7
Length = 823
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|F8W9L0 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001922 "B-1 B cell homeostasis" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0002248
"connective tissue replacement involved in inflammatory response
wound healing" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=IEA] [GO:0006089 "lactate metabolic
process" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006879 "cellular iron ion homeostasis"
evidence=IEA] [GO:0007595 "lactation" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=IEA] [GO:0014850 "response to
muscle activity" evidence=IEA] [GO:0021502 "neural fold elevation
formation" evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0030502 "negative regulation of bone
mineralization" evidence=IEA] [GO:0030949 "positive regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=IEA] [GO:0032007 "negative regulation of TOR signaling
cascade" evidence=IEA] [GO:0032364 "oxygen homeostasis"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0045648 "positive
regulation of erythrocyte differentiation" evidence=IEA]
[GO:0045926 "negative regulation of growth" evidence=IEA]
[GO:0046716 "muscle cell homeostasis" evidence=IEA] [GO:0048546
"digestive tract morphogenesis" evidence=IEA] [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0051541 "elastin
metabolic process" evidence=IEA] [GO:0060574 "intestinal epithelial
cell maturation" evidence=IEA] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987
GO:GO:0005730 GO:GO:0035774 GO:GO:0032869 GO:GO:0001755
GO:GO:0071542 GO:GO:0006110 GO:GO:0009749 GO:GO:0043565
GO:GO:0001666 GO:GO:0048661 GO:GO:0008542 GO:GO:0043524
GO:GO:0050790 GO:GO:0001525 GO:GO:0042593 GO:GO:0032007
GO:GO:0006879 GO:GO:0001077 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0045648 GO:GO:0061298
GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001947
GO:GO:0014850 GO:GO:0001837 GO:GO:0030949 GO:GO:0003151
GO:GO:0007595 GO:GO:0010634 GO:GO:0001892 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0032364
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GO:GO:0061030 GO:GO:0003208 EMBL:AL137129 HGNC:HGNC:4910
ChiTaRS:HIF1A GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
ProteinModelPortal:F8W9L0 SMR:F8W9L0 Ensembl:ENST00000557538
ArrayExpress:F8W9L0 Bgee:F8W9L0 Uniprot:F8W9L0
Length = 767
Score = 181 (68.8 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 154 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 213
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 214 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 273
Query: 367 DFVI 370
++
Sbjct: 274 QCIV 277
>UNIPROTKB|Q309Z6 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:146132 "Eospalax baileyi" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0019896 "axon
transport of mitochondrion" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0071456 "cellular response to hypoxia" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0071456 GO:GO:0003700
GO:GO:0006351 GO:GO:0044212 GO:GO:0004871 GO:GO:0019896
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0035035 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:DQ229099
ProteinModelPortal:Q309Z6 SMR:Q309Z6 Uniprot:Q309Z6
Length = 819
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVI 370
++
Sbjct: 334 QCIV 337
>UNIPROTKB|Q7YSE5 [details] [associations]
symbol:Q7YSE5 "Hypoxia inducible factor 1 alpha subunit"
species:9986 "Oryctolagus cuniculus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
OrthoDB:EOG40CHGP CTD:3091 EMBL:AY273790 RefSeq:NP_001076251.1
UniGene:Ocu.3329 HSSP:Q16665 ProteinModelPortal:Q7YSE5 SMR:Q7YSE5
STRING:Q7YSE5 GeneID:100009579 Uniprot:Q7YSE5
Length = 819
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|Q64F54 [details] [associations]
symbol:Q64F54 "Hypoxia-inducible factor 1 alpha subunit"
species:43179 "Spermophilus tridecemlineatus" [GO:0001666 "response
to hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AY713478 ProteinModelPortal:Q64F54
SMR:Q64F54 Uniprot:Q64F54
Length = 821
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|F1PZ54 [details] [associations]
symbol:HIF1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 CTD:3091 KO:K08268
OMA:QNAQRKR EMBL:AAEX03005770 RefSeq:XP_003639249.1
Ensembl:ENSCAFT00000024897 GeneID:480348 KEGG:cfa:480348
Uniprot:F1PZ54
Length = 823
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|F1SRU5 [details] [associations]
symbol:HIF1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001054 "negative regulation of mesenchymal cell
apoptotic process" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:0061298 "retina vasculature development
in camera-type eye" evidence=IEA] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0048546 "digestive tract
morphogenesis" evidence=IEA] [GO:0046886 "positive regulation of
hormone biosynthetic process" evidence=IEA] [GO:0046716 "muscle
cell homeostasis" evidence=IEA] [GO:0045926 "negative regulation of
growth" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032364 "oxygen homeostasis" evidence=IEA]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0030502 "negative regulation of bone mineralization"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021502 "neural fold elevation formation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019896 "axon transport of mitochondrion" evidence=IEA]
[GO:0014850 "response to muscle activity" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010573
"vascular endothelial growth factor production" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006089 "lactate metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0002248 "connective tissue replacement involved
in inflammatory response wound healing" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0043565 GO:GO:0008542 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0001525 GO:GO:0042593
GO:GO:0032007 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
GO:GO:0061298 GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0014850 GO:GO:0001837
GO:GO:0030949 GO:GO:0071347 GO:GO:0003151 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 GO:GO:0061030
GO:GO:0003208 OMA:QNAQRKR GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
GO:GO:0032909 GO:GO:0010573 EMBL:FP236550
Ensembl:ENSSSCT00000005618 ArrayExpress:F1SRU5 Uniprot:F1SRU5
Length = 824
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|Q6H8T3 [details] [associations]
symbol:hif-1a "Hypoxia inducible factor 1 alpha"
species:134510 "Nannospalax judaei" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AJ715791 ProteinModelPortal:Q6H8T3
SMR:Q6H8T3 Uniprot:Q6H8T3
Length = 824
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|Q16665 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001922 "B-1 B cell homeostasis" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003151
"outflow tract morphogenesis" evidence=IEA] [GO:0003208 "cardiac
ventricle morphogenesis" evidence=IEA] [GO:0006089 "lactate
metabolic process" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0007595 "lactation" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0014850 "response
to muscle activity" evidence=IEA] [GO:0021502 "neural fold
elevation formation" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0030502 "negative regulation of bone
mineralization" evidence=IEA] [GO:0032007 "negative regulation of
TOR signaling cascade" evidence=IEA] [GO:0035162 "embryonic
hemopoiesis" evidence=IEA] [GO:0035774 "positive regulation of
insulin secretion involved in cellular response to glucose
stimulus" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060574
"intestinal epithelial cell maturation" evidence=IEA] [GO:0061030
"epithelial cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:2001054
"negative regulation of mesenchymal cell apoptotic process"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=TAS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;TAS]
[GO:0035035 "histone acetyltransferase binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0071456 "cellular response to
hypoxia" evidence=IEP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0019896 "axon transport of
mitochondrion" evidence=IMP] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0032364 "oxygen
homeostasis" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=TAS]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IDA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IMP] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IMP] [GO:0051879 "Hsp90 protein binding" evidence=IDA]
[GO:0032722 "positive regulation of chemokine production"
evidence=TAS] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=TAS] [GO:0001938 "positive regulation
of endothelial cell proliferation" evidence=IC] [GO:0010575
"positive regulation vascular endothelial growth factor production"
evidence=IDA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IC]
[GO:0045766 "positive regulation of angiogenesis" evidence=IC]
[GO:0045821 "positive regulation of glycolysis" evidence=IC]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IDA] [GO:0045648 "positive regulation of erythrocyte
differentiation" evidence=IC] [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISS] [GO:0002248 "connective
tissue replacement involved in inflammatory response wound healing"
evidence=ISS] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=ISS] [GO:0032963 "collagen metabolic process"
evidence=ISS] [GO:0051541 "elastin metabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0070101 "positive
regulation of chemokine-mediated signaling pathway" evidence=IC]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0071347 "cellular response to interleukin-1"
evidence=IEP] [GO:0010573 "vascular endothelial growth factor
production" evidence=IDA] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IDA;IMP] [GO:0000988 "protein binding
transcription factor activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0032869 GO:GO:0003677 GO:GO:0001755
GO:GO:0001938 GO:GO:0051000 GO:GO:0071542
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0009749 GO:GO:0043565
GO:GO:0048661 GO:GO:0008542 GO:GO:0007219 GO:GO:0043524
GO:GO:0032722 GO:GO:0010575 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 GO:GO:0045766 GO:GO:0042593 GO:GO:0032007
GO:GO:0045821 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 Pathway_Interaction_DB:pdgfrbpathway
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0051879 GO:GO:0014850
Pathway_Interaction_DB:vegfr1_2_pathway
Pathway_Interaction_DB:vegfr1_pathway GO:GO:0001837 GO:GO:0030949
GO:GO:0071347 GO:GO:0003151 GO:GO:0007595 GO:GO:0010634 PDB:1D7G
PDB:4H6J PDBsum:1D7G PDBsum:4H6J
Pathway_Interaction_DB:hif1apathway GO:GO:0001892 GO:GO:0042789
GO:GO:0046886 GO:GO:0043619 GO:GO:0002052 GO:GO:0035162
GO:GO:0048546 GO:GO:0030502 GO:GO:0042541 PDB:1L8C PDBsum:1L8C
GO:GO:0000988 GO:GO:0006089 GO:GO:0010870 GO:GO:0070101 PDB:3HQR
PDB:3HQU PDBsum:3HQR PDBsum:3HQU GO:GO:0032364 PDB:1LM8 PDB:1LQB
PDB:4AJY PDBsum:1LM8 PDBsum:1LQB PDBsum:4AJY PDB:1L3E PDBsum:1L3E
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GO:GO:0061030 GO:GO:0003208 OrthoDB:EOG40CHGP CTD:3091 KO:K08268
EMBL:U22431 EMBL:U29165 EMBL:AF050127 EMBL:AF050115 EMBL:AF050116
EMBL:AF050117 EMBL:AF050118 EMBL:AF050119 EMBL:AF050120
EMBL:AF050121 EMBL:AF050122 EMBL:AF050123 EMBL:AF050124
EMBL:AF050125 EMBL:AF050126 EMBL:FJ790247 EMBL:AF207601
EMBL:AF207602 EMBL:AF208487 EMBL:AF304431 EMBL:AB073325
EMBL:BT009776 EMBL:AL137129 EMBL:BC012527 IPI:IPI00003442
IPI:IPI00332963 IPI:IPI00788876 PIR:I38972 RefSeq:NP_001230013.1
RefSeq:NP_001521.1 RefSeq:NP_851397.1 UniGene:Hs.597216
UniGene:Hs.719495 PDB:1H2K PDB:1H2L PDB:1H2M PDB:2ILM PDBsum:1H2K
PDBsum:1H2L PDBsum:1H2M PDBsum:2ILM DisProt:DP00262
ProteinModelPortal:Q16665 SMR:Q16665 DIP:DIP-29722N IntAct:Q16665
MINT:MINT-133270 STRING:Q16665 PhosphoSite:Q16665 DMDM:2498017
PaxDb:Q16665 PRIDE:Q16665 DNASU:3091 Ensembl:ENST00000323441
Ensembl:ENST00000337138 Ensembl:ENST00000539097 GeneID:3091
KEGG:hsa:3091 UCSC:uc001xfq.2 GeneCards:GC14P062162 HGNC:HGNC:4910
HPA:CAB017442 HPA:HPA001275 MIM:603348 neXtProt:NX_Q16665
PharmGKB:PA29283 OMA:QNAQRKR PhylomeDB:Q16665 BindingDB:Q16665
ChEMBL:CHEMBL4261 ChiTaRS:HIF1A EvolutionaryTrace:Q16665
GenomeRNAi:3091 NextBio:12265 ArrayExpress:Q16665 Bgee:Q16665
CleanEx:HS_HIF1A Genevestigator:Q16665 GermOnline:ENSG00000100644
GO:GO:0001922 GO:GO:0032963 GO:GO:0002248 GO:GO:0051541
GO:GO:0060574 GO:GO:2001054 GO:GO:0021502 GO:GO:0061419
GO:GO:0032909 GO:GO:0010573 Uniprot:Q16665
Length = 826
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|A8MYV6 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1, alpha subunit
(Basic helix-loop-helix transcription factor), isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0005730
EMBL:CH471061 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AL137129 IPI:IPI00788876
UniGene:Hs.597216 UniGene:Hs.719495 HGNC:HGNC:4910 ChiTaRS:HIF1A
SMR:A8MYV6 STRING:A8MYV6 Ensembl:ENST00000394997 UCSC:uc001xfs.2
Uniprot:A8MYV6
Length = 827
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVI 370
++
Sbjct: 334 QCIV 337
>UNIPROTKB|F1LT63 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:61928 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
IPI:IPI00339106 Ensembl:ENSRNOT00000012105 ArrayExpress:F1LT63
Uniprot:F1LT63
Length = 827
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 202 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 261
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 262 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 321
Query: 367 DFVI 370
++
Sbjct: 322 QCIV 325
>UNIPROTKB|Q4ZH58 [details] [associations]
symbol:Q4ZH58 "Hypoxia-inducible factor 1 alpha"
species:64717 "Microtus oeconomus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:DQ010149 ProteinModelPortal:Q4ZH58
SMR:Q4ZH58 Uniprot:Q4ZH58
Length = 828
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|D4A8P8 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001922 "B-1 B cell homeostasis"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0002248 "connective tissue replacement involved in inflammatory
response wound healing" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006089 "lactate metabolic process"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IEA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0014850 "response to muscle activity"
evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021502 "neural fold elevation formation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032007
"negative regulation of TOR signaling cascade" evidence=IEA]
[GO:0032364 "oxygen homeostasis" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0061030 "epithelial
cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0071347 "cellular response
to interleukin-1" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:61928 GO:GO:0005737
GO:GO:0021987 GO:GO:0005730 GO:GO:0035774 GO:GO:0001755
GO:GO:0071542 GO:GO:0006110 GO:GO:0043565 GO:GO:0008542
GO:GO:0071456 GO:GO:0043524 GO:GO:0010575 GO:GO:0050790
GO:GO:0001525 GO:GO:0042593 GO:GO:0032007 GO:GO:0006879
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0014850 GO:GO:0001837 GO:GO:0030949 GO:GO:0071347
GO:GO:0003151 GO:GO:0007595 GO:GO:0010634 GO:GO:0001892
GO:GO:0046886 GO:GO:0043619 GO:GO:0002052 GO:GO:0035162
GO:GO:0048546 GO:GO:0030502 GO:GO:0042541 GO:GO:0000988
GO:GO:0006089 GO:GO:0010870 GO:GO:0032364 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
OrthoDB:EOG40CHGP GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
GO:GO:0032909 GO:GO:0010573 IPI:IPI00557648
Ensembl:ENSRNOT00000049725 ArrayExpress:D4A8P8 Uniprot:D4A8P8
Length = 828
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 333
Query: 367 DFVI 370
++
Sbjct: 334 QCIV 337
>MGI|MGI:106918 [details] [associations]
symbol:Hif1a "hypoxia inducible factor 1, alpha subunit"
species:10090 "Mus musculus" [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=IPI] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001666 "response to hypoxia" evidence=IGI;ISO;IMP;IDA]
[GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0001837
"epithelial to mesenchymal transition" evidence=IMP] [GO:0001892
"embryonic placenta development" evidence=IGI;IMP] [GO:0001922 "B-1
B cell homeostasis" evidence=IMP] [GO:0001944 "vasculature
development" evidence=IGI] [GO:0001947 "heart looping"
evidence=IMP] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IGI] [GO:0002248 "connective tissue
replacement involved in inflammatory response wound healing"
evidence=IMP] [GO:0003151 "outflow tract morphogenesis"
evidence=IMP] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IGI;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006089 "lactate metabolic process" evidence=IMP] [GO:0006110
"regulation of glycolysis" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IMP]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007595
"lactation" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008542 "visual learning"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010573 "vascular endothelial growth factor
production" evidence=ISO] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=ISO] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IMP]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=ISO] [GO:0014850 "response to muscle activity"
evidence=IMP] [GO:0019896 "axon transport of mitochondrion"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0021502
"neural fold elevation formation" evidence=IMP] [GO:0021987
"cerebral cortex development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IGI;IMP] [GO:0030502 "negative regulation
of bone mineralization" evidence=IMP] [GO:0030949 "positive
regulation of vascular endothelial growth factor receptor signaling
pathway" evidence=IMP] [GO:0031514 "motile cilium" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IMP] [GO:0032364 "oxygen homeostasis" evidence=ISO;IMP]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=ISO] [GO:0032963 "collagen metabolic process"
evidence=IMP] [GO:0034244 "negative regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO]
[GO:0035035 "histone acetyltransferase binding" evidence=ISO]
[GO:0035162 "embryonic hemopoiesis" evidence=IMP] [GO:0035774
"positive regulation of insulin secretion involved in cellular
response to glucose stimulus" evidence=IMP] [GO:0042127 "regulation
of cell proliferation" evidence=IMP] [GO:0042541 "hemoglobin
biosynthetic process" evidence=IMP] [GO:0042593 "glucose
homeostasis" evidence=IMP] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IMP] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO;IMP] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=ISO;IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045906 "negative regulation of
vasoconstriction" evidence=ISO] [GO:0045926 "negative regulation of
growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IMP] [GO:0046886 "positive regulation of hormone
biosynthetic process" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048514 "blood vessel
morphogenesis" evidence=IMP] [GO:0048546 "digestive tract
morphogenesis" evidence=IMP] [GO:0048661 "positive regulation of
smooth muscle cell proliferation" evidence=ISO] [GO:0050790
"regulation of catalytic activity" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0051541 "elastin
metabolic process" evidence=IMP] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] [GO:0060574 "intestinal epithelial cell
maturation" evidence=IMP] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IMP] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IMP] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IGI;IMP] [GO:2001054 "negative regulation of mesenchymal
cell apoptotic process" evidence=IMP] [GO:2001141 "regulation of
RNA biosynthetic process" evidence=IPI] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:106918 GO:GO:0005634
GO:GO:0005737 GO:GO:0021987 GO:GO:0005730 GO:GO:0035774
GO:GO:0032869 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0009749 GO:GO:0043565 GO:GO:0048661 GO:GO:0008542
GO:GO:0071456 GO:GO:0043524 GO:GO:0010575 GO:GO:0050790
GO:GO:0001525 GO:GO:0042593 GO:GO:0032007 GO:GO:0006879
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0014850 GO:GO:0001837 GO:GO:0030949
GO:GO:0071347 GO:GO:0003151 GO:GO:0035035 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 eggNOG:NOG289264 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
OrthoDB:EOG40CHGP CTD:3091 KO:K08268 OMA:QNAQRKR ChiTaRS:HIF1A
GO:GO:0001922 GO:GO:0032963 GO:GO:0002248 GO:GO:0051541
GO:GO:0060574 GO:GO:2001054 GO:GO:0021502 GO:GO:0032909
GO:GO:0010573 EMBL:U59496 EMBL:AF003695 EMBL:Y09085 EMBL:Y13656
EMBL:AF004155 EMBL:AF004141 EMBL:AF004142 EMBL:AF004143
EMBL:AF004144 EMBL:AF004145 EMBL:AF004146 EMBL:AF004147
EMBL:AF004148 EMBL:AF004149 EMBL:AF004150 EMBL:AF004151
EMBL:AF004152 EMBL:AF004153 EMBL:AF004154 EMBL:AK034087
EMBL:AK076395 EMBL:AK033471 EMBL:AK017853 EMBL:BC026139 EMBL:X95580
EMBL:X95002 IPI:IPI00336700 IPI:IPI00406683 PIR:JC4837
RefSeq:NP_034561.2 UniGene:Mm.3879 UniGene:Mm.397466
UniGene:Mm.446610 ProteinModelPortal:Q61221 SMR:Q61221
IntAct:Q61221 MINT:MINT-1179248 STRING:Q61221 PhosphoSite:Q61221
PRIDE:Q61221 Ensembl:ENSMUST00000021530 Ensembl:ENSMUST00000110461
Ensembl:ENSMUST00000110464 GeneID:15251 KEGG:mmu:15251
UCSC:uc007nwo.2 UCSC:uc007nwq.2 InParanoid:Q61221 BindingDB:Q61221
ChEMBL:CHEMBL6046 NextBio:287865 Bgee:Q61221 CleanEx:MM_HIF1A
Genevestigator:Q61221 GermOnline:ENSMUSG00000021109 Uniprot:Q61221
Length = 836
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|E2QUK0 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048625 "myoblast cell fate commitment"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043129
"surfactant homeostasis" evidence=IEA] [GO:0042415 "norepinephrine
metabolic process" evidence=IEA] [GO:0035035 "histone
acetyltransferase binding" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0030218 "erythrocyte
differentiation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0030324 GO:GO:0007601 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0001892 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 OMA:QYQDYSL GO:GO:0048625
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:AAEX03007490
Ensembl:ENSCAFT00000004132 Uniprot:E2QUK0
Length = 869
Score = 181 (68.8 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 46/161 (28%), Positives = 72/161 (44%)
Query: 233 LDIRGRIKIL-----HGQNRKLEEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDL 286
L G++K+ H +EP L+ L +C P PS ++IP F S+H +D+
Sbjct: 193 LHCTGQVKVYNNCPPHSSLCSYKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDM 252
Query: 287 SLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTN 346
D R L+GY EL Y+ H D + +HQ L G YR
Sbjct: 253 KFTYCDDRITELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAK 312
Query: 347 DGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
GG+ WL+T ++Y +N +P ++ + L E E D++
Sbjct: 313 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVV 353
>UNIPROTKB|Q99814 [details] [associations]
symbol:EPAS1 "Endothelial PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0002027 "regulation of heart rate" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0042415 "norepinephrine metabolic process" evidence=IEA]
[GO:0043129 "surfactant homeostasis" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0033554 "cellular response to stress" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0071456 "cellular response
to hypoxia" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048625 "myoblast cell fate commitment"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0007165 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0043565 GO:GO:0045944 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0006366 GO:GO:0004871 GO:GO:0001974
GO:GO:0030218 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007005 Pathway_Interaction_DB:vegfr1_2_pathway GO:GO:0002027
PDB:2A24 PDB:3F1N PDB:3F1O PDB:3F1P PDB:3H7W PDB:3H82 PDBsum:2A24
PDBsum:3F1N PDBsum:3F1O PDBsum:3F1P PDBsum:3H7W PDBsum:3H82
GO:GO:0001892 GO:GO:0061418 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 Orphanet:247511 EMBL:U81984 EMBL:U51626
EMBL:BC051338 IPI:IPI00294084 RefSeq:NP_001421.2 UniGene:Hs.468410
PDB:1P97 PDBsum:1P97 ProteinModelPortal:Q99814 SMR:Q99814
DIP:DIP-32857N IntAct:Q99814 MINT:MINT-1199606 STRING:Q99814
PhosphoSite:Q99814 DMDM:32470617 PRIDE:Q99814
Ensembl:ENST00000263734 GeneID:2034 KEGG:hsa:2034 UCSC:uc002ruv.3
CTD:2034 GeneCards:GC02P046436 HGNC:HGNC:3374 HPA:CAB012248
MIM:603349 MIM:611783 neXtProt:NX_Q99814 PharmGKB:PA27809
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InParanoid:Q99814 KO:K09095 OMA:QYQDYSL OrthoDB:EOG4XPQF6
PhylomeDB:Q99814 BindingDB:Q99814 ChEMBL:CHEMBL1744522
ChiTaRS:EPAS1 EvolutionaryTrace:Q99814 GenomeRNAi:2034 NextBio:8255
ArrayExpress:Q99814 Bgee:Q99814 CleanEx:HS_EPAS1
Genevestigator:Q99814 GermOnline:ENSG00000116016 GO:GO:0048625
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
Uniprot:Q99814
Length = 870
Score = 181 (68.8 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 50/165 (30%), Positives = 74/165 (44%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
+EP L+ L +C P PS ++IP F S+H +D+ D R L+GY EL
Sbjct: 215 KEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLG 274
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D + +HQ L G YR GG+ WL+T ++Y +N +P
Sbjct: 275 RSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQP 334
Query: 367 DFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLN--NSYFSDS 409
++ + L E E D++ +MD S L NS F S
Sbjct: 335 QCIMCVNYVLSEIEKNDVVF--SMDQTESLFKPHLMAMNSIFDSS 377
>UNIPROTKB|Q9I8A9 [details] [associations]
symbol:hif1a "Hypoxia-inducible factor 1-alpha"
species:8355 "Xenopus laevis" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0035035
"histone acetyltransferase binding" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AJ277829 RefSeq:NP_001165655.1
UniGene:Xl.4589 ProteinModelPortal:Q9I8A9 SMR:Q9I8A9
GeneID:100337573 KEGG:xla:100337573 Uniprot:Q9I8A9
Length = 805
Score = 179 (68.1 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 40/139 (28%), Positives = 66/139 (47%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ + IC P PS +E P F S+H LD+ D+R L+GY EL
Sbjct: 214 KKPPMTCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYEPDELLG 273
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ + + G YR GG+ W++T + ++Y KNS+P
Sbjct: 274 RSVYEYYHALDSDHLTKPNYNMFTKGQVTTGQYRMLAKKGGYVWVETQATVIYNSKNSQP 333
Query: 367 DFVISTHRPLMEEEGRDLL 385
++ + L E +DL+
Sbjct: 334 QCIVCVNYVLSEVVEKDLI 352
>UNIPROTKB|Q4R658 [details] [associations]
symbol:Q4R658 "Testis cDNA, clone: QtsA-19088, similar to
human hypoxia-inducible factor 1, alpha subunit
(basichelix-loop-helix transcription factor) (HIF1A),transcript
variant 1," species:9541 "Macaca fascicularis" [GO:0001666
"response to hypoxia" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0035035 "histone acetyltransferase binding"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
EMBL:AB169332 ProteinModelPortal:Q4R658 SMR:Q4R658 Uniprot:Q4R658
Length = 826
Score = 177 (67.4 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H + G YR GG+ W++T + ++Y KNS+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHGMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>FB|FBgn0004666 [details] [associations]
symbol:sim "single-minded" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007418
"ventral midline development" evidence=IMP] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;IPI] [GO:0007417 "central nervous system
development" evidence=NAS] [GO:0007398 "ectoderm development"
evidence=TAS] [GO:0007628 "adult walking behavior"
evidence=IMP;TAS] [GO:0040011 "locomotion" evidence=TAS]
[GO:0007420 "brain development" evidence=IMP] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007419 "ventral cord development"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0007420 GO:GO:0007419 GO:GO:0045944
GO:GO:0005667 GO:GO:0035225 GO:GO:0000978 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007398 GO:GO:0007628 GO:GO:0007418 eggNOG:NOG310284
KO:K09100 EMBL:AF071934 EMBL:AY129457 EMBL:M19020 PIR:A29945
PIR:A41647 RefSeq:NP_524340.2 RefSeq:NP_731771.3 UniGene:Dm.4557
ProteinModelPortal:P05709 SMR:P05709 STRING:P05709 GeneID:41612
KEGG:dme:Dmel_CG7771 CTD:41612 FlyBase:FBgn0004666
InParanoid:P05709 OrthoDB:EOG4MPG5H GenomeRNAi:41612 NextBio:824647
Bgee:P05709 GermOnline:CG7771 Uniprot:P05709
Length = 697
Score = 184 (69.8 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 46/144 (31%), Positives = 72/144 (50%)
Query: 244 GQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSD 303
GQ ++ L L A+ ++ EI + MF + KLD+ L+ D R L GY
Sbjct: 248 GQGSLIQN--LGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEP 305
Query: 304 TELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY-- 361
+L Y +H D+ + +HQ LL G YRF T GGW W+Q+ + LV+
Sbjct: 306 QDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNS 365
Query: 362 KNSKPDFVISTHRPLMEEEGRDLL 385
++S+ F++S + L E E +DL+
Sbjct: 366 RSSREVFIVSVNYVLSEREVKDLV 389
Score = 40 (19.1 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 12 SRGEL-GRYLLRY-H-FVLTPLNSVINLITHAIYRPYYPEYQPYTVSNGFSLPT-YEVNK 67
S+ EL G + Y H + +N++++L H P + P NG P+ Y+ ++
Sbjct: 138 SQVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDR 197
Query: 68 SN 69
+
Sbjct: 198 GS 199
Score = 39 (18.8 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 381 GRDLLGKRTMDFKVSYLDAGLNN--SYFSDSDQLTPSHQ 417
G + T + +Y D N SYFSD+ HQ
Sbjct: 640 GNASIVNETSPSQTTYSDLSHNFELSYFSDNSSQQHQHQ 678
>RGD|61928 [details] [associations]
symbol:Hif1a "hypoxia-inducible factor 1, alpha subunit (basic
helix-loop-helix transcription factor)" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA;ISO] [GO:0001076 "RNA polymerase II
transcription factor binding transcription factor activity"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA;ISO]
[GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001568 "blood
vessel development" evidence=ISO] [GO:0001666 "response to hypoxia"
evidence=ISO;ISS;IDA] [GO:0001755 "neural crest cell migration"
evidence=IEA;ISO] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA;ISO] [GO:0001892 "embryonic placenta development"
evidence=IEA;ISO] [GO:0001922 "B-1 B cell homeostasis"
evidence=IEA;ISO] [GO:0001944 "vasculature development"
evidence=ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0002052 "positive regulation of neuroblast proliferation"
evidence=IEA;ISO] [GO:0002248 "connective tissue replacement
involved in inflammatory response wound healing" evidence=IEA;ISO]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA;ISO]
[GO:0003208 "cardiac ventricle morphogenesis" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003690 "double-stranded
DNA binding" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS;IDA;TAS] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0006089 "lactate
metabolic process" evidence=IEA;ISO] [GO:0006110 "regulation of
glycolysis" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;TAS] [GO:0006879
"cellular iron ion homeostasis" evidence=IEA;ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007595 "lactation"
evidence=IEA;ISO] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008542 "visual learning"
evidence=IEA;ISO] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA;ISO] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=IEA;ISO]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA;ISO] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA;ISO] [GO:0014850 "response to
muscle activity" evidence=IEA;ISO] [GO:0019896 "axon transport of
mitochondrion" evidence=IEA;ISO;ISS] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IEA;ISO]
[GO:0021502 "neural fold elevation formation" evidence=IEA;ISO]
[GO:0021987 "cerebral cortex development" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA;ISO]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA;ISO] [GO:0031514
"motile cilium" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032007 "negative regulation of TOR
signaling cascade" evidence=IEA;ISO] [GO:0032364 "oxygen
homeostasis" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0032909 "regulation of transforming growth factor
beta2 production" evidence=IEA;ISO] [GO:0032963 "collagen metabolic
process" evidence=IEA;ISO] [GO:0034244 "negative regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA;ISO;ISS] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA;ISO] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0042541 "hemoglobin biosynthetic process"
evidence=IEA;ISO] [GO:0042593 "glucose homeostasis"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO;IDA] [GO:0043619 "regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA;ISO;IMP] [GO:0043627 "response to
estrogen stimulus" evidence=IEP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO;ISS] [GO:0045648
"positive regulation of erythrocyte differentiation"
evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0045906 "negative regulation of
vasoconstriction" evidence=IMP] [GO:0045926 "negative regulation of
growth" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA;IMP]
[GO:0046716 "muscle cell homeostasis" evidence=IEA;ISO] [GO:0046886
"positive regulation of hormone biosynthetic process"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;ISS;IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis" evidence=ISO]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA;ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=IMP] [GO:0050790 "regulation of catalytic
activity" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0051541 "elastin metabolic process"
evidence=IEA;ISO] [GO:0051879 "Hsp90 protein binding"
evidence=IEA;ISO] [GO:0060135 "maternal process involved in female
pregnancy" evidence=IEP] [GO:0060574 "intestinal epithelial cell
maturation" evidence=IEA;ISO] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA;ISO] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IEA;ISO] [GO:0061419 "positive regulation
of transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA;ISO] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEP] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA;ISO] [GO:0071407 "cellular response to
organic cyclic compound" evidence=IEP] [GO:0071456 "cellular
response to hypoxia" evidence=ISO;ISS] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA;ISO] [GO:2001054 "negative
regulation of mesenchymal cell apoptotic process" evidence=IEA;ISO]
[GO:2001141 "regulation of RNA biosynthetic process" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:61928 GO:GO:0005634 GO:GO:0005737
GO:GO:0043066 GO:GO:0009612 GO:GO:0032869 GO:GO:0060135
GO:GO:0009749 GO:GO:0048661 GO:GO:0045944 GO:GO:0071456
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0044212
GO:GO:0043065 GO:GO:0004871 GO:GO:0003690 GO:GO:0019896
GO:GO:0046982 GO:GO:0043627 GO:GO:0045906 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0071407 GO:GO:0035035
GO:GO:0034244 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 CTD:3091 KO:K08268 EMBL:Y09507
EMBL:AF057308 IPI:IPI00951313 PIR:JC5809 RefSeq:NP_077335.1
UniGene:Rn.10852 ProteinModelPortal:O35800 SMR:O35800
MINT:MINT-235713 STRING:O35800 PRIDE:O35800 GeneID:29560
KEGG:rno:29560 UCSC:RGD:61928 NextBio:609610 ArrayExpress:O35800
Genevestigator:O35800 GermOnline:ENSRNOG00000008292 Uniprot:O35800
Length = 825
Score = 176 (67.0 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y K+S+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKDSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>UNIPROTKB|O35800 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:61928 GO:GO:0005634
GO:GO:0005737 GO:GO:0043066 GO:GO:0009612 GO:GO:0032869
GO:GO:0060135 GO:GO:0009749 GO:GO:0048661 GO:GO:0045944
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 GO:GO:0071222
GO:GO:0044212 GO:GO:0043065 GO:GO:0004871 GO:GO:0003690
GO:GO:0019896 GO:GO:0046982 GO:GO:0043627 GO:GO:0045906
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0071407
GO:GO:0035035 GO:GO:0034244 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 CTD:3091 KO:K08268 EMBL:Y09507
EMBL:AF057308 IPI:IPI00951313 PIR:JC5809 RefSeq:NP_077335.1
UniGene:Rn.10852 ProteinModelPortal:O35800 SMR:O35800
MINT:MINT-235713 STRING:O35800 PRIDE:O35800 GeneID:29560
KEGG:rno:29560 UCSC:RGD:61928 NextBio:609610 ArrayExpress:O35800
Genevestigator:O35800 GermOnline:ENSRNOG00000008292 Uniprot:O35800
Length = 825
Score = 176 (67.0 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 250 EEPPLA-LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELAN 308
++PP+ L IC P PS +EIP F S+H LD+ D+R L+GY EL
Sbjct: 213 KKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query: 309 MGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKP 366
Y+ H D ++ H ++ G YR GG+ W++T + ++Y K+S+P
Sbjct: 273 RSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKDSQP 332
Query: 367 DFVI 370
++
Sbjct: 333 QCIV 336
>ZFIN|ZDB-GENE-010803-1 [details] [associations]
symbol:sim2 "single-minded homolog 2 (Drosophila)"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-010803-1 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 HSSP:Q99814
eggNOG:NOG310284 OrthoDB:EOG4QC14V CTD:6493 EMBL:BC065360
EMBL:AF363019 IPI:IPI00487129 RefSeq:NP_571911.1 UniGene:Dr.15420
GeneID:114450 KEGG:dre:114450 InParanoid:Q8UVV3 OMA:ANIEPEM
NextBio:20796935 Uniprot:Q8UVV3
Length = 585
Score = 166 (63.5 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 45/146 (30%), Positives = 71/146 (48%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L A+ P L EI MF + LDL L+ +D R L G+ +L Y V
Sbjct: 207 LVAVAHSLPPSGLTEIKLHSNMFMFRASLDLKLIFLDSRVSELTGHEPQDLIEKTLYHHV 266
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTH 373
H D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S +
Sbjct: 267 HGCDVFHLRFAHHLLLVKGQVTTRYYRLLSKRGGWVWVQSCATIVHNSRSSRPHCIVSVN 326
Query: 374 RPLMEEEGRDL-LGKRTMDFKVSYLD 398
L + E R+L L + ++SY D
Sbjct: 327 YVLTDVEYRELQLSEDQRRCRLSYKD 352
>UNIPROTKB|E1BSJ1 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0009880
"embryonic pattern specification" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AADN02010800 IPI:IPI00597363
Ensembl:ENSGALT00000025849 OMA:FEPQDLI Uniprot:E1BSJ1
Length = 419
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/167 (28%), Positives = 84/167 (50%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKQGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQT 418
+ L + E ++L + ++D +V+ ++ S FS + ++ S +T
Sbjct: 328 VNYVLTDIEYKEL--QLSLD-QVT-----ISKSQFSCRNSVSTSQET 366
>ZFIN|ZDB-GENE-040426-1315 [details] [associations]
symbol:hif1al "hypoxia-inducible factor 1, alpha
subunit, like" species:7955 "Danio rerio" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-040426-1315 GO:GO:0005737 GO:GO:0003677 GO:GO:0051402
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR021537 Pfam:PF11413 EMBL:AY330295
IPI:IPI00960923 UniGene:Dr.11978 ProteinModelPortal:Q6EGR9
InParanoid:Q6EGR9 ArrayExpress:Q6EGR9 Uniprot:Q6EGR9
Length = 626
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 233 LDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
L G ++ G + L +C P PS +E P F ++H LDL+ D
Sbjct: 186 LHCTGHMQPFSGDDENSPSAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHNLDLTYTQCD 245
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
R L+GY +L ++ H D +V+ + L G YRF T +GG+ W
Sbjct: 246 GRVTELVGYQPDDLIGRSAFEFFHALDFDHVSRSLHILFSKGQVCTGQYRFLTKNGGFVW 305
Query: 353 LQTSSRLVY--KNSKPDFVISTHRPLMEEEGRDLL 385
+T + ++Y + S+P+ V+ + L E +D++
Sbjct: 306 TETQATVLYNSRTSQPEAVVCLNFILSGVEEQDVV 340
>FB|FBgn0262139 [details] [associations]
symbol:trh "trachealess" species:7227 "Drosophila
melanogaster" [GO:0072175 "epithelial tube formation" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA;TAS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0007424 "open tracheal system
development" evidence=NAS;IMP;TAS] [GO:0007431 "salivary gland
development" evidence=NAS;IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=TAS;IPI] [GO:0035277
"spiracle morphogenesis, open tracheal system" evidence=IMP]
[GO:0007443 "Malpighian tubule morphogenesis" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;TAS;IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0007425 "epithelial cell fate determination, open tracheal
system" evidence=IMP;TAS] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP;TAS] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 EMBL:AE014296 GO:GO:0007435 GO:GO:0043565
GO:GO:0035277 GO:GO:0048813 GO:GO:0004871 GO:GO:0000981
GO:GO:0046982 SMART:SM00086 GO:GO:0046331 SUPFAM:SSF47459
GO:GO:0007425 GO:GO:0007443 eggNOG:NOG287666 KO:K09098
GO:GO:0072175 CTD:7200 EMBL:U33427 EMBL:U42699 EMBL:BT031114
EMBL:AY094911 RefSeq:NP_001036575.1 RefSeq:NP_001097461.2
RefSeq:NP_523872.2 UniGene:Dm.7330 ProteinModelPortal:Q24119
SMR:Q24119 STRING:Q24119 GeneID:38065 KEGG:dme:Dmel_CG42865
FlyBase:FBgn0262139 InParanoid:Q24119 OMA:PNASESH OrthoDB:EOG4JWSVB
GenomeRNAi:38065 NextBio:806807 Bgee:Q24119 GermOnline:CG6883
Uniprot:Q24119
Length = 1022
Score = 165 (63.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 246 NRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTE 305
+RK + P L + A+ PPS+ EI + MF ++ DL + + R LL YS +
Sbjct: 373 SRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPED 432
Query: 306 LANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KN 363
L N Y L H +D + +H +L++ G YR GG+ WLQT + +V KN
Sbjct: 433 LVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKN 492
Query: 364 SKPDFVISTHRPLMEEEGRDLL 385
+ +I + + E +++
Sbjct: 493 ADEQNIICVNYVISNRENENMI 514
>RGD|70332 [details] [associations]
symbol:Hif3a "hypoxia inducible factor 3, alpha subunit"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEA;ISO;TAS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:70332
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0001666
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 HSSP:Q99814
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 CTD:64344 eggNOG:NOG288942 KO:K09096 EMBL:AJ277827
IPI:IPI00199807 RefSeq:NP_071973.1 UniGene:Rn.161814
ProteinModelPortal:Q9JHS2 STRING:Q9JHS2 PhosphoSite:Q9JHS2
PRIDE:Q9JHS2 GeneID:64345 KEGG:rno:64345 UCSC:RGD:70332
InParanoid:Q9JHS2 NextBio:613008 ArrayExpress:Q9JHS2
Genevestigator:Q9JHS2 Uniprot:Q9JHS2
Length = 662
Score = 160 (61.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P+ LE P F S+H LD+ D+R + GYS +L
Sbjct: 211 EPPLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 271 SAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSE 330
Query: 368 FVISTHRPL--MEEEG 381
+I H + +EE G
Sbjct: 331 SIICVHFLISRVEENG 346
>UNIPROTKB|Q9JHS2 [details] [associations]
symbol:Hif3a "Hypoxia-inducible factor 3-alpha"
species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:70332 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0001666 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 HSSP:Q99814 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR021537 Pfam:PF11413 CTD:64344 eggNOG:NOG288942
KO:K09096 EMBL:AJ277827 IPI:IPI00199807 RefSeq:NP_071973.1
UniGene:Rn.161814 ProteinModelPortal:Q9JHS2 STRING:Q9JHS2
PhosphoSite:Q9JHS2 PRIDE:Q9JHS2 GeneID:64345 KEGG:rno:64345
UCSC:RGD:70332 InParanoid:Q9JHS2 NextBio:613008 ArrayExpress:Q9JHS2
Genevestigator:Q9JHS2 Uniprot:Q9JHS2
Length = 662
Score = 160 (61.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P+ LE P F S+H LD+ D+R + GYS +L
Sbjct: 211 EPPLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 271 SAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSE 330
Query: 368 FVISTHRPL--MEEEG 381
+I H + +EE G
Sbjct: 331 SIICVHFLISRVEENG 346
>ZFIN|ZDB-GENE-041210-5 [details] [associations]
symbol:sim1b "single-minded homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-041210-5 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 eggNOG:NOG310284
HOGENOM:HOG000236298 EMBL:BX649468 OrthoDB:EOG4QC14V EMBL:FJ654702
IPI:IPI00929984 RefSeq:NP_001153057.1 UniGene:Dr.155154
Ensembl:ENSDART00000023483 GeneID:566656 KEGG:dre:566656 CTD:566656
NextBio:20888303 Uniprot:C1JIE2
Length = 586
Score = 159 (61.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 216 VGLVAVGHTLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVSDLTGYEPQDLIEKTLYH 275
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 276 HVHCCDSFHLRCAHHLLLVKGQVTTKYYRFLSKRGGWVWVQSYATIVHNSRSSRPHCIVS 335
Query: 372 THRPLMEEEGRDLL 385
+ L + E + L+
Sbjct: 336 VNYVLTDTEYKGLI 349
>MGI|MGI:1859778 [details] [associations]
symbol:Hif3a "hypoxia inducible factor 3, alpha subunit"
species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IPI] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IC] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IPI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IPI]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:1859778 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006366
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
EMBL:AC148976 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR021537 Pfam:PF11413 GeneTree:ENSGT00650000093281
CTD:64344 eggNOG:NOG288942 KO:K09096 EMBL:AF060194 EMBL:AH008971
EMBL:AF416641 EMBL:BC120587 EMBL:AK144472 IPI:IPI00131181
IPI:IPI00621179 RefSeq:NP_058564.2 UniGene:Mm.135110
ProteinModelPortal:Q0VBL6 SMR:Q0VBL6 STRING:Q0VBL6
PhosphoSite:Q0VBL6 PRIDE:Q0VBL6 Ensembl:ENSMUST00000037762
GeneID:53417 KEGG:mmu:53417 UCSC:uc009fir.2 UCSC:uc009fit.2
OrthoDB:EOG4BVRT7 NextBio:310241 Bgee:Q0VBL6 CleanEx:MM_HIF3A
Genevestigator:Q0VBL6 Uniprot:Q0VBL6
Length = 662
Score = 159 (61.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P+ LE P F S+H LD+ D+R + GYS +L
Sbjct: 211 EPPLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 270
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 271 SAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVSGGRGPQSE 330
Query: 368 FVISTHRPL--MEEEG 381
+I H + +EE G
Sbjct: 331 SIICVHFLISRVEETG 346
>UNIPROTKB|H0YDZ5 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 EMBL:AC007193 HGNC:HGNC:15825
Ensembl:ENST00000472815 Uniprot:H0YDZ5
Length = 492
Score = 157 (60.3 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 43/136 (31%), Positives = 60/136 (44%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 186 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 245
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 246 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 305
Query: 368 FVISTHRPL--MEEEG 381
++ H + +EE G
Sbjct: 306 SIVCVHFLISQVEETG 321
>ZFIN|ZDB-GENE-020829-1 [details] [associations]
symbol:sim1a "single-minded homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IGI;IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0021979 "hypothalamus
cell differentiation" evidence=IMP] [GO:0021536 "diencephalon
development" evidence=IMP] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-020829-1
GO:GO:0005634 GO:GO:0003677 GO:GO:0071542 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 HSSP:Q99814 eggNOG:NOG310284 GO:GO:0021979
EMBL:AY028626 IPI:IPI00494277 RefSeq:NP_835740.1 UniGene:Dr.25265
ProteinModelPortal:Q98SJ5 STRING:Q98SJ5 GeneID:260351
KEGG:dre:260351 CTD:260351 HOVERGEN:HBG003936 KO:K09100
OrthoDB:EOG4QC14V NextBio:20804722 ArrayExpress:Q98SJ5
Uniprot:Q98SJ5
Length = 745
Score = 159 (61.0 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHSCDTFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>UNIPROTKB|F1N178 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:DAAA02026200 EMBL:DAAA02026201 IPI:IPI00999630
UniGene:Bt.106531 Ensembl:ENSBTAT00000002960 NextBio:20877091
Uniprot:F1N178
Length = 766
Score = 159 (61.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 46/160 (28%), Positives = 74/160 (46%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEE--GRDLLGKRTMDFKVSYLDAGLNNSYFSDS 409
+ L + E G L + K ++ AG + +DS
Sbjct: 328 VNYVLTDTEYKGLQLSLDQIAASKPAFSYAGSSTPALTDS 367
>UNIPROTKB|F5H884 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 InterPro:IPR021537 Pfam:PF11413
EMBL:AC007193 HGNC:HGNC:15825 IPI:IPI00908806
ProteinModelPortal:F5H884 SMR:F5H884 Ensembl:ENST00000420102
UCSC:uc010xxz.2 ArrayExpress:F5H884 Bgee:F5H884 Uniprot:F5H884
Length = 612
Score = 157 (60.3 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 43/136 (31%), Positives = 60/136 (44%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 162 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 221
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 222 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 281
Query: 368 FVISTHRPL--MEEEG 381
++ H + +EE G
Sbjct: 282 SIVCVHFLISQVEETG 297
>UNIPROTKB|E9PB04 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0001666 GO:GO:0045944
GO:GO:0003700 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 InterPro:IPR021537 Pfam:PF11413 EMBL:AC007193
HGNC:HGNC:15825 IPI:IPI01008729 ProteinModelPortal:E9PB04
SMR:E9PB04 Ensembl:ENST00000339613 ArrayExpress:E9PB04 Bgee:E9PB04
Uniprot:E9PB04
Length = 613
Score = 157 (60.3 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 43/136 (31%), Positives = 60/136 (44%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 157 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 216
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 217 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 276
Query: 368 FVISTHRPL--MEEEG 381
++ H + +EE G
Sbjct: 277 SIVCVHFLISQVEETG 292
>MGI|MGI:98306 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:98306 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V
CTD:6492 OMA:NSMPHIT EMBL:U40575 EMBL:AF038857 EMBL:AF038853
EMBL:AF038854 EMBL:AF038856 EMBL:AF044913 EMBL:AF038855 EMBL:D79209
EMBL:AB013491 IPI:IPI00117015 RefSeq:NP_035506.2 UniGene:Mm.4774
ProteinModelPortal:Q61045 SMR:Q61045 IntAct:Q61045 STRING:Q61045
PhosphoSite:Q61045 PRIDE:Q61045 DNASU:20464
Ensembl:ENSMUST00000020071 GeneID:20464 KEGG:mmu:20464
UCSC:uc007fal.1 InParanoid:Q61045 NextBio:298559 Bgee:Q61045
CleanEx:MM_SIM1 Genevestigator:Q61045 GermOnline:ENSMUSG00000019913
Uniprot:Q61045
Length = 765
Score = 158 (60.7 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>UNIPROTKB|H7BZX8 [details] [associations]
symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0004871
SMART:SM00086 EMBL:AP000697 EMBL:AP000698 HGNC:HGNC:10883
ProteinModelPortal:H7BZX8 Ensembl:ENST00000431229 Uniprot:H7BZX8
Length = 480
Score = 155 (59.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 146 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 205
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 206 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 265
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 266 VNYVLTEIEYKEL 278
>UNIPROTKB|A7Z028 [details] [associations]
symbol:HIF3A "HIF3A protein" species:9913 "Bos taurus"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0001666 GO:GO:0003700 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 GeneTree:ENSGT00650000093281 CTD:64344
eggNOG:NOG288942 KO:K09096 OrthoDB:EOG4BVRT7 EMBL:DAAA02047392
EMBL:BC153226 IPI:IPI00695039 RefSeq:NP_001098812.1
UniGene:Bt.43927 Ensembl:ENSBTAT00000025217 GeneID:507699
KEGG:bta:507699 InParanoid:A7Z028 OMA:APILDGT NextBio:20868183
Uniprot:A7Z028
Length = 669
Score = 157 (60.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 40/126 (31%), Positives = 55/126 (43%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D+R + GYS +L
Sbjct: 213 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGC 272
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V + LL G + YRF GG+ W QT + +V P +
Sbjct: 273 SAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 332
Query: 368 FVISTH 373
++ H
Sbjct: 333 SIVCVH 338
>UNIPROTKB|Q9Y2N7 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0005886 GO:GO:0005654 GO:GO:0003677 GO:GO:0045944
EMBL:CH471126 GO:GO:0003700 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
Pathway_Interaction_DB:hif1apathway GO:GO:0061418 HSSP:Q99814
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 EMBL:AB054067 EMBL:AF463492 EMBL:AB118749
EMBL:AB295039 EMBL:AK021653 EMBL:AK024095 EMBL:AK027725
EMBL:AK297828 EMBL:AC007193 EMBL:BC080551 IPI:IPI00164458
IPI:IPI00292048 IPI:IPI00470784 IPI:IPI00738729 IPI:IPI00746815
IPI:IPI00844043 IPI:IPI00844320 PIR:JC7771 RefSeq:NP_071907.4
RefSeq:NP_690007.1 RefSeq:NP_690008.2 UniGene:Hs.420830
ProteinModelPortal:Q9Y2N7 SMR:Q9Y2N7 STRING:Q9Y2N7
PhosphoSite:Q9Y2N7 DMDM:145558932 PRIDE:Q9Y2N7
Ensembl:ENST00000244302 Ensembl:ENST00000244303
Ensembl:ENST00000300862 Ensembl:ENST00000377670 GeneID:64344
KEGG:hsa:64344 UCSC:uc002peh.3 UCSC:uc002pel.3 CTD:64344
GeneCards:GC19P046800 HGNC:HGNC:15825 HPA:HPA041141 MIM:609976
neXtProt:NX_Q9Y2N7 PharmGKB:PA29285 eggNOG:NOG288942
InParanoid:Q9Y2N7 KO:K09096 GenomeRNAi:64344 NextBio:66283
ArrayExpress:Q9Y2N7 Bgee:Q9Y2N7 CleanEx:HS_HIF3A
Genevestigator:Q9Y2N7 Uniprot:Q9Y2N7
Length = 669
Score = 157 (60.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 43/136 (31%), Positives = 60/136 (44%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D R + GYS +L
Sbjct: 213 EPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGC 272
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V+ + LL G + YRF GG+ W QT + +V P +
Sbjct: 273 SAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 332
Query: 368 FVISTHRPL--MEEEG 381
++ H + +EE G
Sbjct: 333 SIVCVHFLISQVEETG 348
>RGD|1309949 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:1309949
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 EMBL:CH474025 KO:K09100
OrthoDB:EOG4QC14V CTD:6492 OMA:NSMPHIT IPI:IPI00361456
RefSeq:NP_001101111.1 UniGene:Rn.165946 Ensembl:ENSRNOT00000057010
GeneID:309888 KEGG:rno:309888 UCSC:RGD:1309949 NextBio:661438
Uniprot:D3ZMU8
Length = 765
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>UNIPROTKB|E1C5G3 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001657 "ureteric bud development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:AADN02002234
KO:K09100 CTD:6492 OMA:NSMPHIT EMBL:AADN02002235 EMBL:AADN02002236
EMBL:AADN02002237 IPI:IPI00821218 RefSeq:XP_419817.2
UniGene:Gga.31324 Ensembl:ENSGALT00000024939 GeneID:396129
KEGG:gga:396129 NextBio:20816186 Uniprot:E1C5G3
Length = 766
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>UNIPROTKB|E2QWV9 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 KO:K09100 CTD:6492
OMA:NSMPHIT EMBL:AAEX03008562 RefSeq:XP_539058.2
ProteinModelPortal:E2QWV9 Ensembl:ENSCAFT00000005680 GeneID:481937
KEGG:cfa:481937 NextBio:20856645 Uniprot:E2QWV9
Length = 766
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>UNIPROTKB|P81133 [details] [associations]
symbol:SIM1 "Single-minded homolog 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001657
EMBL:Z86062 eggNOG:NOG310284 HOGENOM:HOG000236298
HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V EMBL:U70212
EMBL:AL121948 IPI:IPI00292234 RefSeq:NP_005059.2 UniGene:Hs.520293
ProteinModelPortal:P81133 SMR:P81133 STRING:P81133
PhosphoSite:P81133 DMDM:109940166 PRIDE:P81133 DNASU:6492
Ensembl:ENST00000262901 Ensembl:ENST00000369208 GeneID:6492
KEGG:hsa:6492 UCSC:uc003pqj.4 CTD:6492 GeneCards:GC06M100882
HGNC:HGNC:10882 HPA:HPA002084 HPA:HPA024385 MIM:603128
neXtProt:NX_P81133 Orphanet:171829 PharmGKB:PA35782
InParanoid:P81133 OMA:NSMPHIT PhylomeDB:P81133 ChiTaRS:SIM1
GenomeRNAi:6492 NextBio:25231 Bgee:P81133 CleanEx:HS_SIM1
Genevestigator:P81133 GermOnline:ENSG00000112246 Uniprot:P81133
Length = 766
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E + L
Sbjct: 328 VNYVLTDTEYKGL 340
>RGD|1308016 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0009880 "embryonic
pattern specification" evidence=IEA;ISO] [GO:0030324 "lung
development" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:1308016 GO:GO:0005634 GO:GO:0003677
GO:GO:0030324 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00700000104038
GO:GO:0009880 KO:K09100 CTD:6493 OrthoDB:EOG43N7CB EMBL:CH474083
IPI:IPI00362902 RefSeq:NP_001100578.1 UniGene:Rn.113883
Ensembl:ENSRNOT00000002294 GeneID:304071 KEGG:rno:304071
UCSC:RGD:1308016 NextBio:652548 Uniprot:D4AA36
Length = 656
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/133 (30%), Positives = 65/133 (48%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHNNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEVEYKEL 340
>UNIPROTKB|E2RDR2 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 OMA:KKPMLPA
EMBL:AAEX03016522 Ensembl:ENSCAFT00000015386 Uniprot:E2RDR2
Length = 562
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDIEYKEL 340
>UNIPROTKB|I3LA51 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 GO:GO:0009880 OMA:KKPMLPA
EMBL:FP325296 Ensembl:ENSSSCT00000025022 Uniprot:I3LA51
Length = 614
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 150 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 209
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 210 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSCATVVHNSRSSRPHCIVS 269
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 270 VNYVLTDIEYKEL 282
>UNIPROTKB|E1BJ63 [details] [associations]
symbol:E1BJ63 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR013655 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 EMBL:DAAA02003571
EMBL:DAAA02003572 IPI:IPI00695521 Ensembl:ENSBTAT00000028592
Uniprot:E1BJ63
Length = 540
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 93 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 152
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 153 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 212
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 213 VNYVLTDIEYKEL 225
>UNIPROTKB|F1MKK8 [details] [associations]
symbol:LOC782260 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS51302
SMART:SM00091 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0030324 GO:GO:0003700 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 GO:GO:0009880
OMA:KKPMLPA EMBL:DAAA02003571 EMBL:DAAA02003572 IPI:IPI00905160
Ensembl:ENSBTAT00000052408 Uniprot:F1MKK8
Length = 555
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 93 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 152
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 153 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 212
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 213 VNYVLTDIEYKEL 225
>UNIPROTKB|Q14190 [details] [associations]
symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 EMBL:CH471079
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 GO:GO:0009880 EMBL:AP000697 EMBL:AP001726
eggNOG:NOG310284 HOVERGEN:HBG003936 KO:K09100 EMBL:U80456
EMBL:U80457 EMBL:AB003185 EMBL:BC110444 EMBL:D85922 EMBL:D44444
EMBL:D44445 EMBL:D44446 EMBL:D44447 EMBL:D44448 EMBL:AJ001858
EMBL:X84790 EMBL:D70838 IPI:IPI00029105 IPI:IPI00220895 PIR:A58520
PIR:I78525 PIR:I78526 RefSeq:NP_005060.1 RefSeq:NP_033664.2
UniGene:Hs.146186 ProteinModelPortal:Q14190 SMR:Q14190
IntAct:Q14190 STRING:Q14190 PhosphoSite:Q14190 DMDM:2851630
PaxDb:Q14190 PRIDE:Q14190 Ensembl:ENST00000290399
Ensembl:ENST00000430056 GeneID:6493 KEGG:hsa:6493 UCSC:uc002yvq.3
UCSC:uc002yvr.2 CTD:6493 GeneCards:GC21P038071 HGNC:HGNC:10883
HPA:HPA029295 MIM:600892 neXtProt:NX_Q14190 PharmGKB:PA35783
InParanoid:Q14190 OMA:KKPMLPA OrthoDB:EOG43N7CB PhylomeDB:Q14190
GenomeRNAi:6493 NextBio:25235 Bgee:Q14190 CleanEx:HS_SIM2
Genevestigator:Q14190 GermOnline:ENSG00000159263 Uniprot:Q14190
Length = 667
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R + GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D+ ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L E E ++L
Sbjct: 328 VNYVLTEIEYKEL 340
>UNIPROTKB|F1RYR5 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:CU024902 Ensembl:ENSSSCT00000004814 Uniprot:F1RYR5
Length = 767
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 46/161 (28%), Positives = 74/161 (45%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LD+ L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YRF GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVS 327
Query: 372 TH---RPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDS 409
+ R E +G L + K ++ AG + +DS
Sbjct: 328 VNYSSREDTEYKGLQLSLDQISASKPAFSYAGSSTPAMTDS 368
>MGI|MGI:98307 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030324 "lung development" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:98307 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 GO:GO:0009880 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 CTD:6493
OMA:KKPMLPA OrthoDB:EOG43N7CB EMBL:U42554 EMBL:D63383 EMBL:U40576
EMBL:AF023873 EMBL:AF023864 EMBL:AF023865 EMBL:AF023869
EMBL:AF023871 EMBL:AF023870 EMBL:AF023868 EMBL:AF023867
EMBL:AF023866 EMBL:AF023872 EMBL:D64135 IPI:IPI00117078
RefSeq:NP_035507.2 UniGene:Mm.4775 ProteinModelPortal:Q61079
SMR:Q61079 IntAct:Q61079 STRING:Q61079 PhosphoSite:Q61079
PRIDE:Q61079 Ensembl:ENSMUST00000072182 GeneID:20465 KEGG:mmu:20465
UCSC:uc008aae.1 InParanoid:Q61079 NextBio:298563 Bgee:Q61079
CleanEx:MM_SIM2 Genevestigator:Q61079 Uniprot:Q61079
Length = 657
Score = 153 (58.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 40/133 (30%), Positives = 65/133 (48%)
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
+ L A+ P ++ EI MF + LDL L+ +D R L GY +L Y
Sbjct: 208 VGLVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYH 267
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVIS 371
VH D ++ AH LL G YR + GGW W+Q+ + +V+ ++S+P ++S
Sbjct: 268 HVHGCDTFHLRYAHHLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRSSRPHCIVS 327
Query: 372 THRPLMEEEGRDL 384
+ L + E ++L
Sbjct: 328 VNYVLTDVEYKEL 340
>UNIPROTKB|F1RM22 [details] [associations]
symbol:HIF3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005737 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0005667 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
InterPro:IPR021537 Pfam:PF11413 GeneTree:ENSGT00650000093281
OMA:APILDGT EMBL:FP565329 Ensembl:ENSSSCT00000003440 Uniprot:F1RM22
Length = 670
Score = 153 (58.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 40/138 (28%), Positives = 60/138 (43%)
Query: 251 EPPL-ALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANM 309
EPPL L IC P LE P F S+H LD+ D+R + GY +L
Sbjct: 214 EPPLQCLVLICEAIPHPDSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYRPDDLIGC 273
Query: 310 GGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP--D 367
Y+ +H D V + LL G + YRF GG+ W QT + +V P +
Sbjct: 274 SAYEYIHALDSDAVGQSIHALLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE 333
Query: 368 FVISTHRPLMEEEGRDLL 385
++ H + + E +++
Sbjct: 334 SIVCVHFLISQVEETEVV 351
>UNIPROTKB|F1NHD6 [details] [associations]
symbol:AHRR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 Gene3D:4.10.280.10 GO:GO:0033235
GeneTree:ENSGT00700000104038 EMBL:AADN02008286 EMBL:AADN02008287
IPI:IPI00573589 Ensembl:ENSGALT00000021857 OMA:LNRCFIC
Uniprot:F1NHD6
Length = 749
Score = 150 (57.9 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 42/136 (30%), Positives = 71/136 (52%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
+ +G++K L GQ +K PP L+LF I P PS+ E+ K ++ K+KHK D +
Sbjct: 235 MQFQGKLKFLFGQRKKSSSGAVLPPQLSLFCIVVPLLLPSVTEMKMKSLLVKAKHKADDA 294
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
V+ + S T+ +N G L +L Y + H E G +G+ + QTN+
Sbjct: 295 AVNTN---------SSTK-SNSG---LCEAAEL-YGRNCHHEAKNNGENGISLVKVQTNE 340
Query: 348 GGWQWLQTSSRLVYKN 363
W W+Q +++L+Y++
Sbjct: 341 DHWVWVQANTQLLYRS 356
>UNIPROTKB|J9P6G5 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:AAEX03000848 EMBL:AAEX03000849 EMBL:AAEX03000850
EMBL:AAEX03000851 RefSeq:XP_541539.2 Ensembl:ENSCAFT00000047187
GeneID:484424 KEGG:cfa:484424 Uniprot:J9P6G5
Length = 594
Score = 139 (54.0 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 56/222 (25%), Positives = 89/222 (40%)
Query: 148 NYSEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENK 207
++SEV Q L P+ PP P +P+ + S SLA+ I E
Sbjct: 191 DHSEVLEQLGLR---TPTPGPPTPPSVPSSSSSSSSS-----------SLADTPEI-EAS 235
Query: 208 WKESPPV--VSPKSYYQSYNENGPSERLDIRGR-IKILHGQNRKLEEPPLALFAICTPFG 264
E+PP V +S++ L ++ K++H R L L L A+
Sbjct: 236 AAEAPPFSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGR-LRARSLGLVALGHTLP 294
Query: 265 PPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVA 324
P L E+P M + L L++++ + R + +EL Y VH D A +
Sbjct: 295 PAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDAARIR 354
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP 366
+H +LL G YR+ GG+ WLQ+ + + P
Sbjct: 355 QSHLDLLDKGQVMTGYYRWLQRAGGFVWLQSVATVAVSGKSP 396
>ZFIN|ZDB-GENE-080917-55 [details] [associations]
symbol:hif1aa "hypoxia-inducible factor 1, alpha
subunit (basic helix-loop-helix transcription factor) a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-080917-55 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:BX649520 IPI:IPI00506879
Ensembl:ENSDART00000044282 Bgee:F1QNB9 Uniprot:F1QNB9
Length = 760
Score = 140 (54.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 44/166 (26%), Positives = 72/166 (43%)
Query: 237 GRIKILHGQNRKL-EEPPLA---LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMD 292
GRI G +++ EE L IC P+ +E P F S+H LD+ D
Sbjct: 196 GRIHTADGVEKEVCEEKNTCSTYLVLICESIPHPANIEAPLDSRTFLSRHTLDMRFTYCD 255
Query: 293 QRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQW 352
+R LLG+ ++ Y+ H D ++ H L G YR GG+ W
Sbjct: 256 ERITELLGFDPEDVLQHSVYEYYHALDSDHMTKTHHSLFVKGQVCTGQYRLLAKAGGFVW 315
Query: 353 LQTSSRLVY--KNSKPDFVISTHRPLME-EEGRDLLG-KRTMDFKV 394
+T + ++Y KNS+ V+ + L E+ + +L ++T K+
Sbjct: 316 AETQATVIYNSKNSQAQCVVCVNYILSGIEQPKQILSLQQTNSTKI 361
>UNIPROTKB|E2RN66 [details] [associations]
symbol:NPAS4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 GO:GO:0003677 GO:GO:0045944
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GeneTree:ENSGT00530000064165 CTD:266743 OMA:LSTPDPN
EMBL:AAEX03011628 RefSeq:XP_540832.2 Ensembl:ENSCAFT00000020162
GeneID:483711 KEGG:cfa:483711 Uniprot:E2RN66
Length = 800
Score = 138 (53.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 277 MFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELL-KTG- 334
MF+S+H DL+L+ + + + LG+ +EL Y L+H +DLA+ ++ H LL ++G
Sbjct: 214 MFQSRHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASAQHYRLLAESGD 273
Query: 335 ASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
+ R Q GGW W+ L+Y + + + P+ + E L
Sbjct: 274 IQAEMVVRLQAKPGGWAWIYC---LLYSEGPEGPITANNYPISDTEAWSL 320
Score = 49 (22.3 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 31/111 (27%), Positives = 36/111 (32%)
Query: 395 SYLDAGLNNSYFSDSDQLTPSHQTLXXXXXXXXXXXXXXXXXRVNRRYKTQLRDFLSTCR 454
S L L S + SDQLTPS T R Y+ QL ST
Sbjct: 451 SSLQEQLTPSTATFSDQLTPSSATFPDPLTSPLQGQLTETSAR---SYEDQLTPCTSTFP 507
Query: 455 TKRKMSAQHXXXXXXXXXXXIEYLTPPDAVAAAYSNMYTTGYSATTPEYMS 505
+ S E LTPP A+ N S T PE +S
Sbjct: 508 DQLLPST--ATFPEALGSPAHEQLTPPSTAFQAHLN----SPSQTFPEQLS 552
Score = 39 (18.8 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 486 AAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFH 520
A Y + TG SA + + L+ + ++ FH
Sbjct: 756 ATYETAFETGVSAFPYDGFTDELHQLQSQVQDSFH 790
>FB|FBgn0015542 [details] [associations]
symbol:sima "similar" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS;NAS] [GO:0071456 "cellular response to hypoxia"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IDA] [GO:0006974 "response
to DNA damage stimulus" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
EMBL:AE014297 GO:GO:0005634 GO:GO:0005737 GO:GO:0030308
GO:GO:0032869 GO:GO:0003677 GO:GO:0045944 GO:GO:0071456
GO:GO:0006351 GO:GO:0006974 GO:GO:0004871 SMART:SM00086
eggNOG:NOG289264 GeneTree:ENSGT00650000093281 KO:K08268 EMBL:U43090
PIR:JC4851 RefSeq:NP_524584.2 UniGene:Dm.6953
ProteinModelPortal:Q24167 SMR:Q24167 DIP:DIP-21002N IntAct:Q24167
MINT:MINT-304504 STRING:Q24167 PaxDb:Q24167
EnsemblMetazoa:FBtr0085565 GeneID:43580 KEGG:dme:Dmel_CG7951
CTD:43580 FlyBase:FBgn0015542 InParanoid:Q24167 OMA:PGPRTIT
OrthoDB:EOG4JQ2CF PhylomeDB:Q24167 ChiTaRS:sima GenomeRNAi:43580
NextBio:834672 Bgee:Q24167 GermOnline:CG7951 Uniprot:Q24167
Length = 1507
Score = 151 (58.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/127 (29%), Positives = 58/127 (45%)
Query: 256 LFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLV 315
L AI P PS +EIP F +KH LD+ +D + LLGYS +L + +
Sbjct: 299 LMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDKMHDLLGYSPKDLLDTSLFSCQ 358
Query: 316 HYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRP 375
H D + + + +L G YRF GG+ W+ + + +VY KP V+ +
Sbjct: 359 HGADSERLMATFKSVLSKGQGETSRYRFLGKYGGYCWILSQATIVYDKLKPQSVVCVNYV 418
Query: 376 LMEEEGR 382
+ E +
Sbjct: 419 ISNLENK 425
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 556 CHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQ- 614
C++ L Q + +S E Q EL E++++ Q+Q + +SL
Sbjct: 985 CNERLQQHQQQQQQTSGNEFRTFQQLQQELQLQEEQQQRQQQQQQQQQQQQQQQLLSLNI 1044
Query: 615 EC 616
EC
Sbjct: 1045 EC 1046
>UNIPROTKB|F1S978 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005737
GO:GO:0045944 GO:GO:0003700 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
EMBL:CU914667 Ensembl:ENSSSCT00000014634 Uniprot:F1S978
Length = 302
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 59 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 118
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 119 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 177
>UNIPROTKB|F1SHH0 [details] [associations]
symbol:LOC100739785 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0042711 "maternal behavior" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 OMA:FENPKAA EMBL:CU467954
EMBL:CU468220 Ensembl:ENSSSCT00000002197 Uniprot:F1SHH0
Length = 650
Score = 135 (52.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 26 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 83
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 84 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 143
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 144 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 174
Score = 44 (20.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 532 ATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLP 563
>UNIPROTKB|F1MB19 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0042711 "maternal behavior" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0007626 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 GeneTree:ENSGT00700000104038
GO:GO:0042711 OMA:FENPKAA EMBL:DAAA02052717 IPI:IPI00714021
Ensembl:ENSBTAT00000005853 Uniprot:F1MB19
Length = 651
Score = 135 (52.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 10 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 67
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 68 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 127
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 128 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 158
Score = 44 (20.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 533 ATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLP 564
>RGD|628866 [details] [associations]
symbol:Npas4 "neuronal PAS domain protein 4" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO;IDA]
InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 RGD:628866
GO:GO:0003677 GO:GO:0045944 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0046982 eggNOG:NOG128878
GeneTree:ENSGT00530000064165 HOGENOM:HOG000113839
HOVERGEN:HBG082054 OrthoDB:EOG4ZCT4B CTD:266743 OMA:LSTPDPN
EMBL:AB050103 IPI:IPI00194855 RefSeq:NP_705890.1 UniGene:Rn.86654
ProteinModelPortal:Q8CJH6 Ensembl:ENSRNOT00000027119 GeneID:266734
KEGG:rno:266734 UCSC:RGD:628866 InParanoid:Q8CJH6 NextBio:624581
Genevestigator:Q8CJH6 Uniprot:Q8CJH6
Length = 802
Score = 139 (54.0 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 277 MFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELL-KTG- 334
MF+S+H DL+L+ + + + LG+ +EL Y L+H +DLA+ +S H LL + G
Sbjct: 218 MFQSRHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASSQHYRLLAENGD 277
Query: 335 ASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDL 384
+ R Q GGW W+ ++Y + + + + P+ + E L
Sbjct: 278 IQAEMVVRLQAKHGGWTWIYC---MLYSDGPEGPITANNYPISDTEAWSL 324
Score = 42 (19.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 29/111 (26%), Positives = 36/111 (32%)
Query: 395 SYLDAGLNNSYFSDSDQLTPSHQTLXXXXXXXXXXXXXXXXXRVNRRYKTQLRDFLSTCR 454
S L L S + S+QLTPS T R ++ QL ST
Sbjct: 453 SSLQEQLTPSTVTFSEQLTPSSATFPDPLTSSLQGQLTESSAR---SFEEQLTPCTSTFP 509
Query: 455 TKRKMSAQHXXXXXXXXXXXIEYLTPPDAVAAAYSNMYTTGYSATTPEYMS 505
+ S E LTPP A+ N S T PE +S
Sbjct: 510 DQLLPST--ATFPEPLGSPTHEQLTPPSTAFQAHLN----SPSQTFPEQLS 554
Score = 38 (18.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 486 AAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFH 520
A Y + TG S E + L+ + ++ FH
Sbjct: 758 ATYETAFETGVSTFPYEGFADELHQLQSQVQDSFH 792
>UNIPROTKB|F1PI90 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0042711 "maternal behavior"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0007626 GO:GO:0004871 GO:GO:0035176
SMART:SM00086 GeneTree:ENSGT00700000104038 GO:GO:0042711
EMBL:AAEX03005658 EMBL:AAEX03005657 Ensembl:ENSCAFT00000020917
Uniprot:F1PI90
Length = 657
Score = 135 (52.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 26 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 83
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 84 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 143
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 144 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 174
Score = 44 (20.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 539 ATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLP 570
>RGD|1307181 [details] [associations]
symbol:Npas3 "neuronal PAS domain protein 3" species:10116
"Rattus norvegicus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0007626 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 GeneTree:ENSGT00700000104038
GO:GO:0042711 IPI:IPI00367100 Ensembl:ENSRNOT00000049945
Uniprot:F1M4F7
Length = 636
Score = 134 (52.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 8 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 65
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 66 ITDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 125
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 126 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 156
Score = 44 (20.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 518 ATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLP 549
>UNIPROTKB|J9NTF3 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR013655
Pfam:PF08447 PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610
GO:GO:0006355 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AAEX03005658 EMBL:AAEX03005657
Ensembl:ENSCAFT00000046640 OMA:ESCISAR Uniprot:J9NTF3
Length = 707
Score = 135 (52.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 58 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 115
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 116 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 175
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 176 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 206
Score = 44 (20.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 589 ATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLP 620
>ZFIN|ZDB-GENE-060503-934 [details] [associations]
symbol:npas3b "neuronal PAS domain protein 3b"
species:7955 "Danio rerio" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-060503-934 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 EMBL:BX296539 IPI:IPI00612477
Ensembl:ENSDART00000101511 ArrayExpress:F1Q754 Bgee:F1Q754
Uniprot:F1Q754
Length = 770
Score = 133 (51.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
IR R ++ +R L P + L A+ P +L E+ + MF + +DL + + R
Sbjct: 268 IRCRPALVPSSSRALHRP-MGLVALAHTLPPSTLNEVRMESHMFVFRVNMDLQVTYCENR 326
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ S E+ Y +H +DL V +H++LL+ G YR+ GG+ W+Q
Sbjct: 327 ISEYMDLSPAEVVGHTCYHFIHAEDLDTVRQSHEDLLRKGQVVTGYYRWLQRRGGYLWIQ 386
Query: 355 TSSRLVYKNSKP 366
+ + + + P
Sbjct: 387 SCATVSINHKAP 398
>UNIPROTKB|F6ZT88 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] InterPro:IPR000014
InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112 SMART:SM00091
InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355 GO:GO:0004871
SMART:SM00086 Ensembl:ENSMODT00000022361 Uniprot:F6ZT88
Length = 726
Score = 135 (52.6 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 87 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 144
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 145 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 204
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 205 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 235
Score = 44 (20.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 608 ATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLP 639
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 559 TLTADQNSKGYSSPFESDIVHQSVYELV 586
++T NS+ + SP S +H S+ + V
Sbjct: 476 SMTKPPNSEHFPSPQASSSLHVSIPDSV 503
>UNIPROTKB|F8W6J9 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884
EMBL:AC022878 IPI:IPI00217732 HGNC:HGNC:701
ProteinModelPortal:F8W6J9 SMR:F8W6J9 Ensembl:ENST00000389708
ArrayExpress:F8W6J9 Bgee:F8W6J9 Uniprot:F8W6J9
Length = 526
Score = 130 (50.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 332 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEEEGRDLL 385
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ L
Sbjct: 392 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLSRVDTGHL 450
Query: 386 GK 387
G+
Sbjct: 451 GQ 452
>MGI|MGI:1096381 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear
translocator-like" species:10090 "Mus musculus" [GO:0000060
"protein import into nucleus, translocation" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA;IDA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IDA;IMP] [GO:0008134 "transcription factor binding"
evidence=ISA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=ISO] [GO:0032922
"circadian regulation of gene expression" evidence=IDA] [GO:0042176
"regulation of protein catabolic process" evidence=IDA] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IC;ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:1096381 GO:GO:0005829 GO:GO:0003677 GO:GO:0005667
GO:GO:0001077 GO:GO:0000060 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0042176
GO:GO:0016604 Reactome:REACT_109335 Reactome:REACT_24972 CTD:406
HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC OrthoDB:EOG4NS3B2
EMBL:AB012601 EMBL:AB015203 EMBL:AB012602 EMBL:AB014494
EMBL:BC025973 EMBL:BC011080 IPI:IPI00403502 IPI:IPI00462286
IPI:IPI00474434 IPI:IPI00474567 IPI:IPI00875930 PIR:JE0270
RefSeq:NP_001229977.1 RefSeq:NP_031515.1 UniGene:Mm.440371 PDB:4F3L
PDBsum:4F3L ProteinModelPortal:Q9WTL8 SMR:Q9WTL8 DIP:DIP-43977N
IntAct:Q9WTL8 MINT:MINT-1657344 STRING:Q9WTL8 PhosphoSite:Q9WTL8
PaxDb:Q9WTL8 PRIDE:Q9WTL8 Ensembl:ENSMUST00000047321 GeneID:11865
KEGG:mmu:11865 UCSC:uc009jhf.1 UCSC:uc009jhi.1 UCSC:uc009jhj.1
InParanoid:Q9WTL8 NextBio:279875 Bgee:Q9WTL8 Genevestigator:Q9WTL8
GermOnline:ENSMUSG00000055116 Uniprot:Q9WTL8
Length = 632
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVAS 325
P+ EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A
Sbjct: 334 PANGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAE 393
Query: 326 AHQELLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE-- 379
H+++L+T Y+F+ DG + L+ S + N + ++++ST+ ++
Sbjct: 394 CHRQVLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVL 452
Query: 380 EGRD 383
EG D
Sbjct: 453 EGGD 456
>UNIPROTKB|F8VS42 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
HGNC:HGNC:19311 EMBL:AL109769 EMBL:AL133305 EMBL:AL139296
EMBL:AL157689 EMBL:AL158802 EMBL:AL161851 EMBL:AL355886
IPI:IPI01021732 ProteinModelPortal:F8VS42 SMR:F8VS42
Ensembl:ENST00000551634 ArrayExpress:F8VS42 Bgee:F8VS42
Uniprot:F8VS42
Length = 906
Score = 135 (52.6 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 269 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 326
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 327 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 386
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 387 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 417
Score = 45 (20.9 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 789 ATSTAAQRVYTTGTIRYAPAEVTLAMQSNLLP 820
>UNIPROTKB|F7HC48 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0003677 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 OMA:FENPKAA EMBL:ACFV01030586
EMBL:ACFV01030587 EMBL:ACFV01030588 EMBL:ACFV01030589
EMBL:ACFV01030590 EMBL:ACFV01030591 EMBL:ACFV01030592
EMBL:ACFV01030593 EMBL:ACFV01030594 EMBL:ACFV01030595
EMBL:ACFV01030596 EMBL:ACFV01030597 EMBL:ACFV01030598
EMBL:ACFV01030599 EMBL:ACFV01030600 EMBL:ACFV01030601
EMBL:ACFV01030602 EMBL:ACFV01030603 EMBL:ACFV01030604
EMBL:ACFV01030605 EMBL:ACFV01030606 EMBL:ACFV01030607
EMBL:ACFV01030608 EMBL:ACFV01030609 EMBL:ACFV01030610
EMBL:ACFV01030611 EMBL:ACFV01030612 EMBL:ACFV01030613
Ensembl:ENSCJAT00000010549 Uniprot:F7HC48
Length = 932
Score = 135 (52.6 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 292 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 349
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 350 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 409
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 410 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 440
Score = 45 (20.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 814 ATSTAAQRVYTTGTIRYAPAEVTLAMQSNLLP 845
>UNIPROTKB|Q8IXF0 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0035176 "social behavior"
evidence=IEA] [GO:0042711 "maternal behavior" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0007626 GO:GO:0006351 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459 GO:GO:0042711
eggNOG:NOG287666 KO:K09098 EMBL:AB055962 EMBL:AB054575
EMBL:AB054576 EMBL:AF164438 EMBL:AY157302 EMBL:AY157303
EMBL:AL079281 IPI:IPI00217513 IPI:IPI00394963 IPI:IPI00394964
IPI:IPI00394965 IPI:IPI00394966 IPI:IPI00394967
RefSeq:NP_001158221.1 RefSeq:NP_001159365.1 RefSeq:NP_071406.1
RefSeq:NP_775182.1 UniGene:Hs.657892 UniGene:Hs.675437
UniGene:Hs.675475 ProteinModelPortal:Q8IXF0 SMR:Q8IXF0
STRING:Q8IXF0 PhosphoSite:Q8IXF0 DMDM:38604888 PaxDb:Q8IXF0
PRIDE:Q8IXF0 DNASU:64067 Ensembl:ENST00000341321
Ensembl:ENST00000346562 Ensembl:ENST00000356141
Ensembl:ENST00000357798 Ensembl:ENST00000547068
Ensembl:ENST00000548645 GeneID:64067 KEGG:hsa:64067 UCSC:uc001wrs.3
UCSC:uc001wrt.3 UCSC:uc001wru.3 UCSC:uc001wrv.3 CTD:64067
GeneCards:GC14P033408 HGNC:HGNC:19311 HPA:HPA002892 MIM:609430
neXtProt:NX_Q8IXF0 PharmGKB:PA134968746 HOVERGEN:HBG052656
InParanoid:Q8IXF0 PhylomeDB:Q8IXF0 GenomeRNAi:64067 NextBio:65842
ArrayExpress:Q8IXF0 Bgee:Q8IXF0 CleanEx:HS_NPAS3
Genevestigator:Q8IXF0 GermOnline:ENSG00000151322 Uniprot:Q8IXF0
Length = 933
Score = 135 (52.6 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 292 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 349
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 350 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 409
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 410 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 440
Score = 45 (20.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 815 ATSTAAQRVYTTGTIRYAPAEVTLAMQSNLLP 846
>UNIPROTKB|F8VR32 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
HGNC:HGNC:19311 EMBL:AL109769 EMBL:AL133305 EMBL:AL139296
EMBL:AL157689 EMBL:AL158802 EMBL:AL161851 EMBL:AL355886
IPI:IPI01021176 ProteinModelPortal:F8VR32 SMR:F8VR32
Ensembl:ENST00000551492 OMA:FENPKAA ArrayExpress:F8VR32 Bgee:F8VR32
Uniprot:F8VR32
Length = 938
Score = 135 (52.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 297 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 354
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 355 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 414
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 415 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 445
Score = 45 (20.9 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 820 ATSTAAQRVYTTGTIRYAPAEVTLAMQSNLLP 851
>UNIPROTKB|Q5R4T2 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9601 "Pongo abelii"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 CTD:406
HOVERGEN:HBG107503 KO:K02296 EMBL:CR861161 RefSeq:NP_001126900.1
UniGene:Pab.3880 ProteinModelPortal:Q5R4T2 GeneID:100173916
KEGG:pon:100173916 Uniprot:Q5R4T2
Length = 625
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 331 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 390
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 391 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 449
>UNIPROTKB|O00327 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IPI] [GO:0051879
"Hsp90 protein binding" evidence=IDA] [GO:0000982 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
EMBL:CH471064 GO:GO:0003677 GO:GO:0045944 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
HOGENOM:HOG000234379 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0051879 GO:GO:0042176 Pathway_Interaction_DB:circadianpathway
Reactome:REACT_24941 CTD:406 HOVERGEN:HBG107503 KO:K02296
OMA:EKINTNC OrthoDB:EOG4NS3B2 EMBL:D89722 EMBL:AB000812
EMBL:AB000813 EMBL:AB000814 EMBL:AB000815 EMBL:AB000816 EMBL:U51627
EMBL:U60415 EMBL:AF044288 EMBL:AK095749 EMBL:AK291510 EMBL:EF015894
EMBL:AC016884 EMBL:AC022878 EMBL:BC016674 EMBL:BC031214
EMBL:BC041129 IPI:IPI00217732 IPI:IPI00217734 IPI:IPI00217735
IPI:IPI00217736 IPI:IPI00412162 IPI:IPI00413132 IPI:IPI00783543
IPI:IPI00879656 IPI:IPI00910251 PIR:JC5405 PIR:JC5407 PIR:PC4288
PIR:PC4289 RefSeq:NP_001025443.1 RefSeq:NP_001025444.1
RefSeq:NP_001169.3 UniGene:Hs.65734 PDB:4H10 PDBsum:4H10
ProteinModelPortal:O00327 SMR:O00327 IntAct:O00327 STRING:O00327
PhosphoSite:O00327 PaxDb:O00327 PRIDE:O00327 DNASU:406
Ensembl:ENST00000361003 Ensembl:ENST00000389707
Ensembl:ENST00000396441 Ensembl:ENST00000401424
Ensembl:ENST00000403290 Ensembl:ENST00000403482
Ensembl:ENST00000403510 GeneID:406 KEGG:hsa:406 UCSC:uc001mkp.3
UCSC:uc001mkr.3 UCSC:uc001mks.3 UCSC:uc001mkx.3 UCSC:uc009ygm.1
GeneCards:GC11P013299 HGNC:HGNC:701 MIM:602550 neXtProt:NX_O00327
PharmGKB:PA24996 InParanoid:O00327 GenomeRNAi:406 NextBio:1701
ArrayExpress:O00327 Bgee:O00327 Genevestigator:O00327
GermOnline:ENSG00000133794 Uniprot:O00327
Length = 626
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 332 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 392 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 450
>UNIPROTKB|A0MLS5 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9796 "Equus caballus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296
OrthoDB:EOG4NS3B2 EMBL:DQ988038 RefSeq:NP_001075390.1
UniGene:Eca.2805 ProteinModelPortal:A0MLS5 STRING:A0MLS5
GeneID:100034115 KEGG:ecb:100034115 InParanoid:A0MLS5
Uniprot:A0MLS5
Length = 626
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 332 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 392 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 450
>UNIPROTKB|O88529 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10036 "Mesocricetus auratus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 EMBL:AF070917
ProteinModelPortal:O88529 IntAct:O88529 Uniprot:O88529
Length = 626
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 332 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 392 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 450
>RGD|62003 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear translocator-like"
species:10116 "Rattus norvegicus" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISO] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007623 "circadian rhythm"
evidence=IEP;ISO] [GO:0016604 "nuclear body" evidence=ISO]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
[GO:0032922 "circadian regulation of gene expression"
evidence=ISO;ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=NAS] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:62003 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0042752 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296 EMBL:AB012600
EMBL:AF015953 EMBL:AF317669 EMBL:BC099833 IPI:IPI00339130
IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2 UniGene:Rn.14532
ProteinModelPortal:Q9EPW1 STRING:Q9EPW1 PhosphoSite:Q9EPW1
Ensembl:ENSRNOT00000019645 GeneID:29657 KEGG:rno:29657
UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 332 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 392 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 450
>UNIPROTKB|Q9EPW1 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:62003
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503
KO:K02296 EMBL:AB012600 EMBL:AF015953 EMBL:AF317669 EMBL:BC099833
IPI:IPI00339130 IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2
UniGene:Rn.14532 ProteinModelPortal:Q9EPW1 STRING:Q9EPW1
PhosphoSite:Q9EPW1 Ensembl:ENSRNOT00000019645 GeneID:29657
KEGG:rno:29657 UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 332 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 392 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 450
>UNIPROTKB|F6VP83 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9544 "Macaca
mulatta" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0007626 GO:GO:0006351 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0042711 OMA:FENPKAA
Ensembl:ENSMMUT00000020820 Uniprot:F6VP83
Length = 913
Score = 135 (52.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 276 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 333
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 334 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 393
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 394 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 424
Score = 44 (20.5 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 795 ATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLP 826
>UNIPROTKB|Q8IUM7 [details] [associations]
symbol:NPAS4 "Neuronal PAS domain-containing protein 4"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
GO:GO:0003677 GO:GO:0045944 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 eggNOG:NOG128878 HOGENOM:HOG000113839
HOVERGEN:HBG082054 OrthoDB:EOG4ZCT4B EMBL:AB049469 EMBL:AK094025
EMBL:AK096253 EMBL:BC105001 EMBL:BC105003 IPI:IPI00216785
RefSeq:NP_849195.2 UniGene:Hs.256036 ProteinModelPortal:Q8IUM7
SMR:Q8IUM7 STRING:Q8IUM7 PhosphoSite:Q8IUM7 DMDM:74714317
PaxDb:Q8IUM7 PRIDE:Q8IUM7 DNASU:266743 Ensembl:ENST00000311034
GeneID:266743 KEGG:hsa:266743 UCSC:uc001ohx.1 CTD:266743
GeneCards:GC11P066188 HGNC:HGNC:18983 HPA:HPA039255 MIM:608554
neXtProt:NX_Q8IUM7 PharmGKB:PA142671254 InParanoid:Q8IUM7
OMA:LSTPDPN PhylomeDB:Q8IUM7 GenomeRNAi:266743 NextBio:93338
ArrayExpress:Q8IUM7 Bgee:Q8IUM7 CleanEx:HS_NPAS4
Genevestigator:Q8IUM7 GermOnline:ENSG00000174576 Uniprot:Q8IUM7
Length = 802
Score = 138 (53.6 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 34/124 (27%), Positives = 63/124 (50%)
Query: 277 MFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELL-KTG- 334
MF+S+H DL+L+ + + + LG+ +EL Y L+H +DLA+ ++ H LL ++G
Sbjct: 216 MFQSRHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASAQHYRLLAESGD 275
Query: 335 ASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGK-RTMDFK 393
+ R Q GGW W+ L+Y + + + P+ + E L + + D +
Sbjct: 276 IQAEMVVRLQAKTGGWAWIYC---LLYSEGPEGPITANNYPISDMEAWSLRQQLNSEDTQ 332
Query: 394 VSYL 397
+Y+
Sbjct: 333 AAYV 336
Score = 41 (19.5 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 395 SYLDAGLNNSYFSDSDQLTPSHQT 418
S L L S + SDQLTPS T
Sbjct: 453 STLQEQLTPSTATFSDQLTPSSAT 476
Score = 39 (18.8 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 486 AAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFH 520
A Y + TG SA + + L+ + ++ FH
Sbjct: 758 ATYETAFETGVSAFPYDGFTDELHQLQSQVQDSFH 792
>MGI|MGI:1351610 [details] [associations]
symbol:Npas3 "neuronal PAS domain protein 3" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007610 "behavior" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042711 "maternal behavior" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:1351610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0003677 GO:GO:0007626 GO:GO:0006351
GO:GO:0004871 GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459
GO:GO:0042711 eggNOG:NOG287666 OrthoDB:EOG4M0F1J HOVERGEN:HBG052656
EMBL:AF173871 EMBL:AF168769 IPI:IPI00137835 UniGene:Mm.247044
UniGene:Mm.466545 ProteinModelPortal:Q9QZQ0 SMR:Q9QZQ0
STRING:Q9QZQ0 PhosphoSite:Q9QZQ0 PRIDE:Q9QZQ0 UCSC:uc007nno.1
HOGENOM:HOG000113836 InParanoid:Q9QZQ0 CleanEx:MM_NPAS3
Genevestigator:Q9QZQ0 GermOnline:ENSMUSG00000021010 Uniprot:Q9QZQ0
Length = 925
Score = 134 (52.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 297 LRLRVPLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 354
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 355 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 414
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 415 SSATIAINAKNANEKNIIWVNYLLSNPEYKD 445
Score = 44 (20.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 483 AVAAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
A + A +YTTG P ++ ++ N LP
Sbjct: 807 ATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLP 838
>UNIPROTKB|F1NG48 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] [GO:0042711 "maternal behavior"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 OMA:FENPKAA EMBL:AADN02003378
EMBL:AADN02003379 EMBL:AADN02003380 IPI:IPI00575845
Ensembl:ENSGALT00000016244 Uniprot:F1NG48
Length = 727
Score = 135 (52.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 235 IRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQR 294
+R R+ + HG R + + L + PP++ E+ MF ++ +DL+++ + R
Sbjct: 107 LRLRVSLSHG--RTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENR 164
Query: 295 GKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQ 354
+ + ++ Y +H +D+ + +H +LL G YR+ +GG+ W+Q
Sbjct: 165 ISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQ 224
Query: 355 TSSRLVY--KNSKPDFVISTHRPLMEEEGRD 383
+S+ + KN+ +I + L E +D
Sbjct: 225 SSATIAVNAKNASEKNIIWVNYLLSNPEYKD 255
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 485 AAAYSNMYTTGYSATTPEYMSQSLYDNRLP 514
+ A +YTTG P ++ ++ N LP
Sbjct: 611 STAAQRVYTTGTIRYAPAEVTLAMQGNLLP 640
>UNIPROTKB|E1BLF5 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0005667 GO:GO:0000060 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 CTD:406 KO:K02296 OMA:EKINTNC EMBL:DAAA02040648
IPI:IPI00712443 RefSeq:NP_001178099.1 UniGene:Bt.39079 PRIDE:E1BLF5
Ensembl:ENSBTAT00000017323 GeneID:530705 KEGG:bta:530705
NextBio:20875311 Uniprot:E1BLF5
Length = 626
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 34/124 (27%), Positives = 63/124 (50%)
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVAS 325
P+ EI K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A
Sbjct: 328 PANGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAE 387
Query: 326 AHQELLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE-- 379
H+++L++ Y+F+ DG + L+ S + N + ++++ST+ ++
Sbjct: 388 CHRQVLQSREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVL 446
Query: 380 EGRD 383
EG D
Sbjct: 447 EGGD 450
>UNIPROTKB|Q91YA9 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:1026970 "Nannospalax galili"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AJ318060 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
HOVERGEN:HBG107503 ProteinModelPortal:Q91YA9 Uniprot:Q91YA9
Length = 626
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
+I K + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 332 DIKVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 392 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 450
>UNIPROTKB|E2R130 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03012928
Ensembl:ENSCAFT00000012969 Uniprot:E2R130
Length = 627
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
+I K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 332 DIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 392 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 450
>UNIPROTKB|J9NTT7 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:EKINTNC EMBL:AAEX03012928
Ensembl:ENSCAFT00000044767 Uniprot:J9NTT7
Length = 659
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
+I K + + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 364 DIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 423
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTHRPLMEE--EGRD 383
+L+T Y+F+ DG + L+ S + N + ++++ST+ ++ EG D
Sbjct: 424 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD 482
>UNIPROTKB|F1RM06 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 OMA:VYPHLQR EMBL:FP103026
Ensembl:ENSSSCT00000003447 Uniprot:F1RM06
Length = 598
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 52/222 (23%), Positives = 86/222 (38%)
Query: 148 NYSEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENK 207
++SEV Q L P+ PP P +P+ + S + P E+ + E
Sbjct: 190 DHSEVLEQLGLR---APTSGPPTPPSVPSSSSS--SSSSSSFADTP-----EIVSAPEAS 239
Query: 208 WKESPPV--VSPKSYYQSYNENGPSERLDIRGR-IKILHGQNRKLEEPPLALFAICTPFG 264
E P V +S++ L ++ K++H R L L L A+
Sbjct: 240 PTEMSPSSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGR-LRARALGLVALGHTLP 298
Query: 265 PPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVA 324
P L E+P M + L L++++ + R + +EL Y VH D +
Sbjct: 299 PAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIR 358
Query: 325 SAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP 366
+H +LL G YR+ GG+ WLQ+ + + P
Sbjct: 359 QSHLDLLDKGQVMTGYYRWLQRAGGFVWLQSVATVAVSGKSP 400
>UNIPROTKB|Q99742 [details] [associations]
symbol:NPAS1 "Neuronal PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0007417 "central
nervous system development" evidence=TAS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610
GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:U77968 EMBL:AB054002 EMBL:BC039016 EMBL:U51628 IPI:IPI00293815
RefSeq:NP_002508.2 UniGene:Hs.79564 ProteinModelPortal:Q99742
SMR:Q99742 STRING:Q99742 DMDM:59803108 PRIDE:Q99742
Ensembl:ENST00000449844 GeneID:4861 KEGG:hsa:4861 UCSC:uc002pfw.3
CTD:4861 GeneCards:GC19P047523 HGNC:HGNC:7894 MIM:603346
neXtProt:NX_Q99742 PharmGKB:PA31695 eggNOG:NOG287666
HOGENOM:HOG000236298 HOVERGEN:HBG052655 InParanoid:Q99742 KO:K09098
OMA:VYPHLQR OrthoDB:EOG4M0F1J PhylomeDB:Q99742 GenomeRNAi:4861
NextBio:18726 ArrayExpress:Q99742 Bgee:Q99742 CleanEx:HS_NPAS1
Genevestigator:Q99742 GermOnline:ENSG00000130751 Uniprot:Q99742
Length = 590
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 46/190 (24%), Positives = 76/190 (40%)
Query: 196 SLAEMNTIGENKWKESPP-VVSPKSYYQSYNENGPSERLDIRGR-IKILHGQNRKLEEPP 253
SLA+ I + K P +V +S++ L ++ K++H R L
Sbjct: 222 SLADTPEIEASLTKVPPSSLVQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGR-LRAHA 280
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ P L E+P M + L L++++ + R + +EL Y
Sbjct: 281 LGLVALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQ 340
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPD--FVIS 371
VH D + +H +LL G YR+ GG+ WLQ+ + + P V+
Sbjct: 341 FVHGQDATRIRQSHVDLLDKGQVMTGYYRWLQRAGGFVWLQSVATVAGSGKSPGEHHVLW 400
Query: 372 THRPLMEEEG 381
L + EG
Sbjct: 401 VSHVLSQAEG 410
>FB|FBgn0039411 [details] [associations]
symbol:dys "dysfusion" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA;IPI] [GO:0007424 "open tracheal system
development" evidence=NAS;IMP] [GO:0035147 "branch fusion, open
tracheal system" evidence=IEP;IMP] [GO:0046982 "protein
heterodimerization activity" evidence=TAS;IPI] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007427 "epithelial cell migration,
open tracheal system" evidence=IMP] [GO:0043234 "protein complex"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634
GO:GO:0043234 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0007427 GO:GO:0035147 CTD:42327
GeneTree:ENSGT00530000064165 UniGene:Dm.18571 GeneID:43174
KEGG:dme:Dmel_CG32474 FlyBase:FBgn0039411 GenomeRNAi:43174
NextBio:832549 RefSeq:NP_733137.3 ProteinModelPortal:Q9VBH3
SMR:Q9VBH3 STRING:Q9VBH3 EnsemblMetazoa:FBtr0300618 UCSC:CG32474-RA
InParanoid:Q9VBH3 OMA:VIYATIV PhylomeDB:Q9VBH3 ArrayExpress:Q9VBH3
Bgee:Q9VBH3 Uniprot:Q9VBH3
Length = 920
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 35/129 (27%), Positives = 63/129 (48%)
Query: 253 PLALFAICTPFGPPSLLE--IPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMG 310
P+ L A CTP P E + +F + H +D+ + +D+ G+ LGY + L
Sbjct: 384 PVFL-ATCTPIAMPETRECVVQGATNVFTTIHSMDMKIAHIDKNGEFHLGYDKSTLQGTS 442
Query: 311 GYDLVHYDDLAYVASAHQELLKT--GASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDF 368
Y+L+H D+L H ++++ S ++ R Q + G + W+ L ++S PD
Sbjct: 443 WYNLIHSDNLTEAQKKHSLIIQSEQDRSCILLVRMQRSSGEYTWVHVV--LQVRDS-PD- 498
Query: 369 VISTHRPLM 377
ST +P++
Sbjct: 499 --STQQPVI 505
>UNIPROTKB|Q9I8T7 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 GO:GO:0042176
EMBL:AF205219 EMBL:AF246957 IPI:IPI00577807 RefSeq:NP_001001463.1
UniGene:Gga.1329 ProteinModelPortal:Q9I8T7 STRING:Q9I8T7
Ensembl:ENSGALT00000032732 GeneID:374115 KEGG:gga:374115 CTD:406
HOVERGEN:HBG107503 InParanoid:Q9I8T7 KO:K02296 OMA:EKINTNC
OrthoDB:EOG4NS3B2 NextBio:20813631 ArrayExpress:Q9I8T7
Uniprot:Q9I8T7
Length = 633
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K + S+H +D V +DQR +L Y EL Y+ H DD+ ++A H++
Sbjct: 339 EIRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 398
Query: 330 LLKTGASGMI-AYRFQTNDGGWQWLQTSSRLVYKN---SKPDFVISTH 373
+L+T Y+F+ DG + L+ S + N + ++++ST+
Sbjct: 399 VLQTREKITTNCYKFKIKDGSFITLR-SRWFSFMNPWTKEVEYIVSTN 445
>FB|FBgn0261703 [details] [associations]
symbol:gce "germ cell-expressed bHLH-PAS" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0043069 "negative regulation of programmed cell
death" evidence=IGI] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF00010 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 EMBL:AE014298 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0043069 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001188593.1 RefSeq:NP_511160.2 ProteinModelPortal:Q9VXW7
SMR:Q9VXW7 STRING:Q9VXW7 PRIDE:Q9VXW7 GeneID:32457
KEGG:dme:Dmel_CG42739 UCSC:CG6211-RA CTD:32457 FlyBase:FBgn0261703
InParanoid:Q9VXW7 PhylomeDB:Q9VXW7 GenomeRNAi:32457 NextBio:778557
ArrayExpress:Q9VXW7 Bgee:Q9VXW7 Uniprot:Q9VXW7
Length = 689
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 35/135 (25%), Positives = 65/135 (48%)
Query: 265 PPSLLE--IPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAY 322
PP + I + +K++H +D ++ DQR ++ GY E+ N+ + +H DD+ +
Sbjct: 255 PPKIASRLIDANTLEYKTRHLIDGRIIDCDQRIGIVAGYMTDEVRNLSPFTFMHNDDVRW 314
Query: 323 VASAHQELLKTGAS-GMIAYRFQTNDGGWQWLQTSSRLVY--KNSKPDFVISTHRPLMEE 379
V A +++ +S G YR T +G +LQ+ L + +K + + L EE
Sbjct: 315 VIVALRQMYDCNSSYGESTYRLFTRNGNIIYLQSKGYLEIDKETNKVHSFVCVNTLLGEE 374
Query: 380 EGRDLLGKRTMDFKV 394
EG+ + + F V
Sbjct: 375 EGKRRVQEMKKKFSV 389
>RGD|1310040 [details] [associations]
symbol:Npas1 "neuronal PAS domain protein 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:1310040 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:CH473979 CTD:4861
KO:K09098 OMA:VYPHLQR OrthoDB:EOG4M0F1J IPI:IPI00373182
RefSeq:NP_001100949.1 UniGene:Rn.211375 Ensembl:ENSRNOT00000020855
GeneID:308387 KEGG:rno:308387 UCSC:RGD:1310040 NextBio:658741
Uniprot:D3ZJ66
Length = 595
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 44/172 (25%), Positives = 71/172 (41%)
Query: 196 SLAEMNTIGENKWKESPPV-VSPKSYYQSYNENGPSERLDIRGR-IKILHGQNRKLEEPP 253
SL + I + + SP V +S++ L+++ K++H R L
Sbjct: 224 SLVDTPEIEASPTEASPAFRVQERSFFVRMKSTLTKRGLNVKASGYKVIHVTGR-LRARA 282
Query: 254 LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYD 313
L L A+ P L E+P M + L L++++ + R + +EL Y
Sbjct: 283 LGLVALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQ 342
Query: 314 LVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSK 365
VH D+ + +H +LL G YR+ GG+ WLQ S V N K
Sbjct: 343 FVHGQDVTRIRQSHLDLLDKGQVVTGYYRWLQRAGGFVWLQ-SVATVAGNGK 393
>UNIPROTKB|E1B815 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:DAAA02047406 IPI:IPI00717601 RefSeq:NP_001179586.1
UniGene:Bt.109442 Ensembl:ENSBTAT00000020691 GeneID:528272
KEGG:bta:528272 NextBio:20874783 Uniprot:E1B815
Length = 587
Score = 121 (47.7 bits), Expect = 0.00058, P = 0.00058
Identities = 52/221 (23%), Positives = 86/221 (38%)
Query: 148 NYSEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENK 207
++SEV Q L P+ PP P +P+ + S SLA+ I +
Sbjct: 183 DHSEVLEQLGLR---APTPGPPTPPSVPSSSSSSSSSS----------SLADTPEIEASP 229
Query: 208 WKESPPV-VSPKSYYQSYNENGPSERLDIRGR-IKILHGQNRKLEEPPLALFAICTPFGP 265
+ S V +S++ L ++ K++H R L L L A+ P
Sbjct: 230 TEVSRSSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGR-LRARALGLVALGHTLPP 288
Query: 266 PSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVAS 325
L E+P M + L L++++ + R + +EL Y VH D +
Sbjct: 289 APLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQ 348
Query: 326 AHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKP 366
+H +LL G YR+ GG+ WLQ+ + + P
Sbjct: 349 SHLDLLDKGQVMTGYYRWLQRAGGFVWLQSVATVAVSGKSP 389
>MGI|MGI:2664186 [details] [associations]
symbol:Npas4 "neuronal PAS domain protein 4" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO;IPI]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 MGI:MGI:2664186
GO:GO:0003677 GO:GO:0045944 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 eggNOG:NOG128878 GeneTree:ENSGT00530000064165
HOGENOM:HOG000113839 HOVERGEN:HBG082054 OrthoDB:EOG4ZCT4B
CTD:266743 OMA:LSTPDPN EMBL:AB049835 EMBL:AB054577 EMBL:AY730724
EMBL:AK032607 IPI:IPI00221579 RefSeq:NP_705781.1 UniGene:Mm.287867
ProteinModelPortal:Q8BGD7 SMR:Q8BGD7 STRING:Q8BGD7
PhosphoSite:Q8BGD7 PRIDE:Q8BGD7 Ensembl:ENSMUST00000056129
GeneID:225872 KEGG:mmu:225872 UCSC:uc008gbu.2 InParanoid:Q8BGD7
NextBio:377833 Bgee:Q8BGD7 CleanEx:MM_NPAS4 Genevestigator:Q8BGD7
GermOnline:ENSMUSG00000045903 Uniprot:Q8BGD7
Length = 802
Score = 133 (51.9 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 277 MFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELL-KTG- 334
MF+S+H DL+L+ + + + LG+ +EL Y L+H +DLA +S H LL ++G
Sbjct: 218 MFQSRHAKDLALLDVSESVLIYLGFERSELLCKSWYGLLHPEDLAQASSQHYRLLAESGD 277
Query: 335 ASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGK-RTMDFK 393
+ R Q GGW W+ ++Y + + P+ + E L + + D +
Sbjct: 278 IQAEMVVRLQAKHGGWTWIYC---MLYSEGPEGPFTANNYPISDTEAWSLRQQLNSEDTQ 334
Query: 394 VSYL 397
+Y+
Sbjct: 335 AAYV 338
Score = 39 (18.8 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 476 EYLTPPDAVAAAYSNMYTTGYSATTPEYMS 505
E LTPP A+ N S T PE +S
Sbjct: 529 EQLTPPSTAFQAHLN----SPSQTFPEQLS 554
Score = 38 (18.4 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 395 SYLDAGLNNSYFSDSDQLTPSHQT 418
S L L S + S+QLTPS T
Sbjct: 453 SSLQEQLTPSTVTFSEQLTPSSAT 476
Score = 38 (18.4 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 486 AAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFH 520
A Y + TG S E + L+ + ++ FH
Sbjct: 758 ATYETAFETGVSTFPYEGFADELHQLQSQVQDSFH 792
>ZFIN|ZDB-GENE-000509-2 [details] [associations]
symbol:arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-2
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG107503 OrthoDB:EOG4DFPNB GO:GO:0009648
eggNOG:NOG285764 EMBL:BC128806 IPI:IPI00482035 UniGene:Dr.81323
ProteinModelPortal:A1A5T9 InParanoid:A1A5T9 ArrayExpress:A1A5T9
Uniprot:A1A5T9
Length = 631
Score = 118 (46.6 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 270 EIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQE 329
EI K F +++ +D +DQR +LGY EL Y+ H DDL ++A H++
Sbjct: 346 EIKVKPTEFVTRYAMDGKFTFVDQRATTILGYLPQELLGTSCYEYFHLDDLPHLAERHRK 405
Query: 330 LLKTGAS-GMIAYRFQTNDGGWQWLQTS--SRLVYKNSKPDFVISTH 373
+L++ Y+F+T G + LQ+ S + + ++++ST+
Sbjct: 406 VLRSKEKIETNCYKFKTKYGSFVNLQSQWFSFINPWTKEVEYIVSTN 452
Score = 48 (22.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 244 GQNR--KLEEPPLALFA----ICTPFGPPSLLEIPHK 274
G+N LEE P L A + TP SL+E+P K
Sbjct: 16 GENTGDALEEEPQGLSASLSGLMTPTSASSLMELPRK 52
>UNIPROTKB|F1RU55 [details] [associations]
symbol:NPAS4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 GO:GO:0003677 GO:GO:0045944
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GeneTree:ENSGT00530000064165 OMA:LSTPDPN EMBL:CU928034
Ensembl:ENSSSCT00000014147 Uniprot:F1RU55
Length = 802
Score = 129 (50.5 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 32/124 (25%), Positives = 61/124 (49%)
Query: 277 MFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELL-KTG- 334
MF+S+H DL+L+ + + + LG+ +EL Y L+H +DL + ++ H LL ++G
Sbjct: 218 MFQSRHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLGHASAQHYRLLAESGD 277
Query: 335 ASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGK-RTMDFK 393
+ R GGW W+ L+Y + + + P+ + E L + + D +
Sbjct: 278 IQAEMVVRLLAKPGGWAWIYC---LLYSEGPEGPITANNYPISDSEAWSLRQQLNSEDTQ 334
Query: 394 VSYL 397
+Y+
Sbjct: 335 AAYV 338
Score = 41 (19.5 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 395 SYLDAGLNNSYFSDSDQLTPSHQT 418
S L L S + SDQLTPS T
Sbjct: 453 SSLQEQLTPSTATFSDQLTPSSAT 476
Score = 39 (18.8 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 486 AAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFH 520
A Y + TG SA + + L+ + ++ FH
Sbjct: 758 ATYETAFETGVSAFPYDGFTDELHQLQSQVQDSFH 792
>MGI|MGI:1333776 [details] [associations]
symbol:Ahrr "aryl-hydrocarbon receptor repressor"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006805 "xenobiotic metabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0009410
"response to xenobiotic stimulus" evidence=IC] [GO:0033235
"positive regulation of protein sumoylation" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 MGI:MGI:1333776
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 GO:GO:0006805 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:57491 eggNOG:NOG314160 HOGENOM:HOG000033866
HOVERGEN:HBG073122 KO:K09094 GO:GO:0033235 EMBL:AB015140
EMBL:AK154152 EMBL:AK154761 EMBL:AK155711 EMBL:CT009486
EMBL:AC123833 EMBL:BC118534 EMBL:AK173134 IPI:IPI00131310
IPI:IPI00856961 IPI:IPI00894801 RefSeq:NP_033774.1
UniGene:Mm.290446 ProteinModelPortal:Q3U1U7 SMR:Q3U1U7
STRING:Q3U1U7 PhosphoSite:Q3U1U7 PRIDE:Q3U1U7
Ensembl:ENSMUST00000022059 Ensembl:ENSMUST00000109640 GeneID:11624
KEGG:mmu:11624 UCSC:uc007rev.1 UCSC:uc007rew.1 UCSC:uc007rex.1
GeneTree:ENSGT00700000104038 InParanoid:Q3U1U7 OrthoDB:EOG4TF0JW
NextBio:279175 Bgee:Q3U1U7 Genevestigator:Q3U1U7 Uniprot:Q3U1U7
Length = 701
Score = 120 (47.3 bits), Expect = 0.00095, P = 0.00094
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 233 LDIRGRIKILHGQNRKLEE----PP-LALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLS 287
+ +G++K L GQ +K PP L+LF I P PS+ E+ K K+KH+ D+
Sbjct: 235 MQFQGKLKFLFGQKKKTPSGTALPPRLSLFCIVAPV-LPSVTEMKMKSTFLKAKHRADI- 292
Query: 288 LVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTND 347
+V+MD R K + ++EL + L Y+A G +G+ +R QT+
Sbjct: 293 VVTMDSRAKAVTSLCESEL----------HPKLNYLAGK-----SNGENGISLFRGQTDR 337
Query: 348 GGW-QWLQTSSRLVYKNSKPDFV 369
W + L SS L + PD +
Sbjct: 338 SHWARALARSSCLCLRGG-PDLL 359
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 630 576 0.00081 120 3 11 23 0.45 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 167
No. of states in DFA: 617 (66 KB)
Total size of DFA: 346 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.85u 0.10s 51.95t Elapsed: 00:00:22
Total cpu time: 51.88u 0.10s 51.98t Elapsed: 00:00:22
Start: Thu Aug 15 13:05:50 2013 End: Thu Aug 15 13:06:12 2013
WARNINGS ISSUED: 1