BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy8266
MISLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLR
TKSYFQEM

High Scoring Gene Products

Symbol, full name Information P value
ss
spineless
protein from Drosophila melanogaster 2.0e-26
F1SEI6
Uncharacterized protein
protein from Sus scrofa 8.9e-19
AHRR
Aryl hydrocarbon receptor repressor
protein from Homo sapiens 1.4e-18
AHRR
Aryl hydrocarbon receptor repressor
protein from Homo sapiens 1.4e-18
AHRR
Aryl hydrocarbon receptor repressor
protein from Homo sapiens 1.4e-18
I3L5U3
Uncharacterized protein
protein from Sus scrofa 1.7e-18
AHR
Uncharacterized protein
protein from Gallus gallus 2.4e-18
Ahr
RCG61977, isoform CRA_b
protein from Rattus norvegicus 4.0e-18
Ahr
aryl hydrocarbon receptor
gene from Rattus norvegicus 8.3e-18
AHR
Aryl hydrocarbon receptor
protein from Homo sapiens 1.1e-17
Ahr
Aryl hydrocarbon receptor
protein from Mus musculus castaneus 1.1e-17
Ahr
aryl-hydrocarbon receptor
protein from Mus musculus 1.1e-17
LOC100737319
Uncharacterized protein
protein from Sus scrofa 1.1e-17
AHR
Uncharacterized protein
protein from Canis lupus familiaris 1.1e-17
Ahr
Aryl hydrocarbon receptor
protein from Mus spretus 1.1e-17
Ahr
Aryl hydrocarbon receptor
protein from Mus spicilegus 1.1e-17
Ahr
Aryl hydrocarbon receptor
protein from Mus caroli 1.1e-17
Ahr
Aryl hydrocarbon receptor
protein from Mus musculus molossinus 1.1e-17
AHRR
Aryl hydrocarbon receptor repressor
protein from Homo sapiens 1.6e-17
ahr2
aryl hydrocarbon receptor 2
gene_product from Danio rerio 1.8e-17
AHR
Uncharacterized protein
protein from Bos taurus 3.6e-17
AHRR
Uncharacterized protein
protein from Bos taurus 5.9e-17
Ahrr
aryl-hydrocarbon receptor repressor
protein from Mus musculus 9.1e-17
Ahrr
aryl-hydrocarbon receptor repressor
gene from Rattus norvegicus 9.1e-17
ahr1b
aryl hydrocarbon receptor 1b
gene_product from Danio rerio 1.4e-16
ahrrb
aryl-hydrocarbon receptor repressor b
gene_product from Danio rerio 4.6e-16
ahr-1 gene from Caenorhabditis elegans 9.8e-15
ahrra
aryl-hydrocarbon receptor repressor a
gene_product from Danio rerio 6.1e-14
LOC424033
Uncharacterized protein
protein from Gallus gallus 5.8e-13
LOC100859347
Uncharacterized protein
protein from Gallus gallus 1.3e-12
ahr1a
aryl hydrocarbon receptor 1a
gene_product from Danio rerio 2.8e-12
SIM2
Uncharacterized protein
protein from Gallus gallus 6.2e-06
SIM2
Uncharacterized protein
protein from Canis lupus familiaris 9.6e-06
Sim2
single-minded homolog 2 (Drosophila)
gene from Rattus norvegicus 1.2e-05
Sim2
single-minded homolog 2 (Drosophila)
protein from Mus musculus 1.2e-05
SIM2
Single-minded homolog 2
protein from Homo sapiens 1.2e-05
sim2
single-minded homolog 2 (Drosophila)
gene_product from Danio rerio 2.1e-05
Sim1
single-minded homolog 1 (Drosophila)
protein from Mus musculus 4.9e-05
Sim1
single-minded homolog 1 (Drosophila)
gene from Rattus norvegicus 4.9e-05
SIM1
Uncharacterized protein
protein from Gallus gallus 4.9e-05
SIM1
Uncharacterized protein
protein from Bos taurus 4.9e-05
SIM1
Uncharacterized protein
protein from Canis lupus familiaris 4.9e-05
SIM1
Single-minded homolog 1
protein from Homo sapiens 4.9e-05
LOC100627550
Uncharacterized protein
protein from Sus scrofa 4.9e-05
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Homo sapiens 5.0e-05
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Homo sapiens 5.0e-05
sim
single-minded
protein from Drosophila melanogaster 0.00012
I3LMD4
Uncharacterized protein
protein from Sus scrofa 0.00019
LOC100738978
Uncharacterized protein
protein from Sus scrofa 0.00021
HIF3A
Hypoxia-inducible factor 3-alpha
protein from Homo sapiens 0.00021
sim1a
single-minded homolog 1a (Drosophila)
gene_product from Danio rerio 0.00027
LOC419390
Uncharacterized protein
protein from Gallus gallus 0.00031
HIF3A
Uncharacterized protein
protein from Sus scrofa 0.00038
sim1b
single-minded homolog 1b (Drosophila)
gene_product from Danio rerio 0.00041
NPAS1
Uncharacterized protein
protein from Canis lupus familiaris 0.00042
NPAS1
Uncharacterized protein
protein from Bos taurus 0.00053
NPAS1
Neuronal PAS domain-containing protein 1
protein from Homo sapiens 0.00053
LOC100517221
Uncharacterized protein
protein from Sus scrofa 0.00054
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Homo sapiens 0.00059
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Pongo abelii 0.00073
ARNTL
Uncharacterized protein
protein from Bos taurus 0.00074
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Homo sapiens 0.00074
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Equus caballus 0.00074
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Mesocricetus auratus 0.00074
Arntl
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Nannospalax galili 0.00074
Arntl
aryl hydrocarbon receptor nuclear translocator-like
gene from Rattus norvegicus 0.00074
Arntl
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Rattus norvegicus 0.00074
arntl1a
aryl hydrocarbon receptor nuclear translocator-like 1a
gene_product from Danio rerio 0.00074
ARNTL
Uncharacterized protein
protein from Canis lupus familiaris 0.00074
Arntl
aryl hydrocarbon receptor nuclear translocator-like
protein from Mus musculus 0.00074
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1
protein from Gallus gallus 0.00075
arntl1b
aryl hydrocarbon receptor nuclear translocator-like 1b
gene_product from Danio rerio 0.00076
ARNTL
Uncharacterized protein
protein from Canis lupus familiaris 0.00078
Npas1
neuronal PAS domain protein 1
protein from Mus musculus 0.00088
Npas1
neuronal PAS domain protein 1
gene from Rattus norvegicus 0.00088
dys
dysfusion
protein from Drosophila melanogaster 0.00092

The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy8266
        (68 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0003513 - symbol:ss "spineless" species:7227 "Dros...   310  2.0e-26   1
UNIPROTKB|F1SEI6 - symbol:F1SEI6 "Uncharacterized protein...   229  8.9e-19   1
UNIPROTKB|E5RFG4 - symbol:AHRR "Aryl hydrocarbon receptor...   224  1.4e-18   1
UNIPROTKB|E5RGQ2 - symbol:AHRR "Aryl hydrocarbon receptor...   224  1.4e-18   1
UNIPROTKB|G3V143 - symbol:AHRR "Aryl hydrocarbon receptor...   224  1.4e-18   1
UNIPROTKB|I3L5U3 - symbol:I3L5U3 "Uncharacterized protein...   227  1.7e-18   1
UNIPROTKB|F1NLX8 - symbol:AHR "Uncharacterized protein" s...   233  2.4e-18   1
UNIPROTKB|G3V6M2 - symbol:Ahr "RCG61977, isoform CRA_b" s...   231  4.0e-18   1
RGD|2074 - symbol:Ahr "aryl hydrocarbon receptor" species...   228  8.3e-18   1
UNIPROTKB|P35869 - symbol:AHR "Aryl hydrocarbon receptor"...   227  1.1e-17   1
UNIPROTKB|Q8R4S6 - symbol:Ahr "Aryl hydrocarbon receptor"...   227  1.1e-17   1
MGI|MGI:105043 - symbol:Ahr "aryl-hydrocarbon receptor" s...   227  1.1e-17   1
UNIPROTKB|I3LF82 - symbol:AHR "Uncharacterized protein" s...   227  1.1e-17   1
UNIPROTKB|E2QWU8 - symbol:AHR "Uncharacterized protein" s...   227  1.1e-17   1
UNIPROTKB|Q8R4S2 - symbol:Ahr "Aryl hydrocarbon receptor"...   227  1.1e-17   1
UNIPROTKB|Q8R4S4 - symbol:Ahr "Aryl hydrocarbon receptor"...   227  1.1e-17   1
UNIPROTKB|Q8R4S7 - symbol:Ahr "Aryl hydrocarbon receptor"...   227  1.1e-17   1
UNIPROTKB|Q8R4S5 - symbol:Ahr "Aryl hydrocarbon receptor"...   227  1.1e-17   1
UNIPROTKB|A9YTQ3 - symbol:AHRR "Aryl hydrocarbon receptor...   224  1.6e-17   1
ZFIN|ZDB-GENE-990714-16 - symbol:ahr2 "aryl hydrocarbon r...   226  1.8e-17   1
UNIPROTKB|F1ML85 - symbol:AHR "Uncharacterized protein" s...   222  3.6e-17   1
UNIPROTKB|F1NHD6 - symbol:AHRR "Uncharacterized protein" ...   220  4.8e-17   1
UNIPROTKB|F1MYT2 - symbol:AHRR "Uncharacterized protein" ...   219  5.9e-17   1
MGI|MGI:1333776 - symbol:Ahrr "aryl-hydrocarbon receptor ...   217  9.1e-17   1
RGD|1559857 - symbol:Ahrr "aryl-hydrocarbon receptor repr...   217  9.1e-17   1
ZFIN|ZDB-GENE-050922-1 - symbol:ahr1b "aryl hydrocarbon r...   217  1.4e-16   1
ZFIN|ZDB-GENE-051018-2 - symbol:ahrrb "aryl-hydrocarbon r...   209  4.6e-16   1
WB|WBGene00000096 - symbol:ahr-1 species:6239 "Caenorhabd...   197  9.8e-15   1
ZFIN|ZDB-GENE-051018-1 - symbol:ahrra "aryl-hydrocarbon r...   189  6.1e-14   1
UNIPROTKB|E1C4K6 - symbol:LOC424033 "Uncharacterized prot...   182  5.8e-13   1
UNIPROTKB|E1BY63 - symbol:LOC100859347 "Uncharacterized p...   177  1.3e-12   1
UNIPROTKB|F1NWS4 - symbol:LOC100859347 "Uncharacterized p...   177  1.3e-12   1
ZFIN|ZDB-GENE-020531-2 - symbol:ahr1a "aryl hydrocarbon r...   176  2.8e-12   1
UNIPROTKB|F1NTI6 - symbol:SIM1 "Uncharacterized protein" ...   108  2.6e-06   1
UNIPROTKB|E1BSJ1 - symbol:SIM2 "Uncharacterized protein" ...   113  6.2e-06   1
UNIPROTKB|E2RDR2 - symbol:SIM2 "Uncharacterized protein" ...   113  9.6e-06   1
RGD|1308016 - symbol:Sim2 "single-minded homolog 2 (Droso...   113  1.2e-05   1
MGI|MGI:98307 - symbol:Sim2 "single-minded homolog 2 (Dro...   113  1.2e-05   1
UNIPROTKB|Q14190 - symbol:SIM2 "Single-minded homolog 2" ...   113  1.2e-05   1
ZFIN|ZDB-GENE-010803-1 - symbol:sim2 "single-minded homol...   110  2.1e-05   1
MGI|MGI:98306 - symbol:Sim1 "single-minded homolog 1 (Dro...   108  4.9e-05   1
RGD|1309949 - symbol:Sim1 "single-minded homolog 1 (Droso...   108  4.9e-05   1
UNIPROTKB|E1C5G3 - symbol:SIM1 "Uncharacterized protein" ...   108  4.9e-05   1
UNIPROTKB|F1N178 - symbol:SIM1 "Uncharacterized protein" ...   108  4.9e-05   1
UNIPROTKB|E2QWV9 - symbol:SIM1 "Uncharacterized protein" ...   108  4.9e-05   1
UNIPROTKB|P81133 - symbol:SIM1 "Single-minded homolog 1" ...   108  4.9e-05   1
UNIPROTKB|F1RYR5 - symbol:SIM1 "Uncharacterized protein" ...   108  4.9e-05   1
UNIPROTKB|E9PKF0 - symbol:ARNTL "Aryl hydrocarbon recepto...    96  5.0e-05   1
UNIPROTKB|E9PPV4 - symbol:ARNTL "Aryl hydrocarbon recepto...    96  5.0e-05   1
UNIPROTKB|Q9DG35 - symbol:BMAL1 "BHLH-PAS transcription f...    95  6.3e-05   1
UNIPROTKB|F1NJ70 - symbol:F1NJ70 "Uncharacterized protein...    94  8.1e-05   1
FB|FBgn0004666 - symbol:sim "single-minded" species:7227 ...   104  0.00012   1
UNIPROTKB|E1BVD7 - symbol:E1BVD7 "Uncharacterized protein...    91  0.00017   1
UNIPROTKB|F1P0F5 - symbol:F1P0F5 "Uncharacterized protein...    91  0.00017   1
UNIPROTKB|I3LMD4 - symbol:NPAS3 "Uncharacterized protein"...    94  0.00019   1
UNIPROTKB|F1S6X1 - symbol:LOC100738978 "Uncharacterized p...    96  0.00021   1
UNIPROTKB|E9PNQ7 - symbol:HIF3A "Hypoxia-inducible factor...    90  0.00021   1
ZFIN|ZDB-GENE-020829-1 - symbol:sim1a "single-minded homo...   101  0.00027   1
UNIPROTKB|E1BW65 - symbol:LOC419390 "Uncharacterized prot...    89  0.00031   1
UNIPROTKB|E1BVE8 - symbol:LOC419390 "Uncharacterized prot...    89  0.00033   1
UNIPROTKB|F1RM22 - symbol:HIF3A "Uncharacterized protein"...    99  0.00038   1
ZFIN|ZDB-GENE-041210-5 - symbol:sim1b "single-minded homo...    98  0.00041   1
UNIPROTKB|J9P6G5 - symbol:NPAS1 "Uncharacterized protein"...    98  0.00042   1
UNIPROTKB|E1B815 - symbol:NPAS1 "Uncharacterized protein"...    97  0.00053   1
UNIPROTKB|Q99742 - symbol:NPAS1 "Neuronal PAS domain-cont...    97  0.00053   1
UNIPROTKB|F1RM06 - symbol:NPAS1 "Uncharacterized protein"...    97  0.00054   1
UNIPROTKB|F8W6J9 - symbol:ARNTL "Aryl hydrocarbon recepto...    96  0.00059   1
UNIPROTKB|Q5R4T2 - symbol:ARNTL "Aryl hydrocarbon recepto...    96  0.00073   1
UNIPROTKB|E1BLF5 - symbol:ARNTL "Uncharacterized protein"...    96  0.00074   1
UNIPROTKB|O00327 - symbol:ARNTL "Aryl hydrocarbon recepto...    96  0.00074   1
UNIPROTKB|A0MLS5 - symbol:ARNTL "Aryl hydrocarbon recepto...    96  0.00074   1
UNIPROTKB|O88529 - symbol:ARNTL "Aryl hydrocarbon recepto...    96  0.00074   1
UNIPROTKB|Q91YA9 - symbol:Arntl "Aryl hydrocarbon recepto...    96  0.00074   1
RGD|62003 - symbol:Arntl "aryl hydrocarbon receptor nucle...    96  0.00074   1
UNIPROTKB|Q9EPW1 - symbol:Arntl "Aryl hydrocarbon recepto...    96  0.00074   1
ZFIN|ZDB-GENE-000509-1 - symbol:arntl1a "aryl hydrocarbon...    96  0.00074   1
UNIPROTKB|E2R130 - symbol:ARNTL "Uncharacterized protein"...    96  0.00074   1
MGI|MGI:1096381 - symbol:Arntl "aryl hydrocarbon receptor...    96  0.00074   1
UNIPROTKB|Q9I8T7 - symbol:ARNTL "Aryl hydrocarbon recepto...    96  0.00075   1
ZFIN|ZDB-GENE-030408-1 - symbol:arntl1b "aryl hydrocarbon...    96  0.00076   1
UNIPROTKB|J9NTT7 - symbol:ARNTL "Uncharacterized protein"...    96  0.00078   1
MGI|MGI:109205 - symbol:Npas1 "neuronal PAS domain protei...    95  0.00088   1
RGD|1310040 - symbol:Npas1 "neuronal PAS domain protein 1...    95  0.00088   1
FB|FBgn0039411 - symbol:dys "dysfusion" species:7227 "Dro...    97  0.00092   1


>FB|FBgn0003513 [details] [associations]
            symbol:ss "spineless" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=ISS;IDA;NAS] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS;NAS] [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=NAS] [GO:0007469 "antennal development" evidence=IEP]
            [GO:0048800 "antennal morphogenesis" evidence=IMP] [GO:0004871
            "signal transducer activity" evidence=IEA] [GO:0007165 "signal
            transduction" evidence=IEA] [GO:0010092 "specification of organ
            identity" evidence=IMP] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0036011 "imaginal disc-derived leg segmentation" evidence=IMP]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
            InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            EMBL:AE014297 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
            GO:GO:0000122 GO:GO:0004871 GO:GO:0048814 SMART:SM00086
            TIGRFAMs:TIGR00229 GO:GO:0036011 GO:GO:0010092 GO:GO:0048800
            RefSeq:NP_001163629.2 RefSeq:NP_001247140.1 UniGene:Dm.3249
            ProteinModelPortal:E1JIM6 SMR:E1JIM6 GeneID:41988
            KEGG:dme:Dmel_CG6993 CTD:41988 FlyBase:FBgn0003513 GenomeRNAi:41988
            NextBio:826600 Bgee:E1JIM6 Uniprot:E1JIM6
        Length = 1048

 Score = 310 (114.2 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 62/64 (96%), Positives = 63/64 (98%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             SLKPPPKDGVTKSNPSKRHRERLNAELD LA+LLPFEQNILSKLDRLSILRLSVSYLRTK
Sbjct:    19 SLKPPPKDGVTKSNPSKRHRERLNAELDLLASLLPFEQNILSKLDRLSILRLSVSYLRTK 78

Query:    63 SYFQ 66
             SYFQ
Sbjct:    79 SYFQ 82


>UNIPROTKB|F1SEI6 [details] [associations]
            symbol:F1SEI6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
            EMBL:FP312884 Ensembl:ENSSSCT00000016739 Uniprot:F1SEI6
        Length = 385

 Score = 229 (85.7 bits), Expect = 8.9e-19, P = 8.9e-19
 Identities = 43/65 (66%), Positives = 57/65 (87%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    22 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 80

Query:    63 SYFQE 67
             S+F +
Sbjct:    81 SFFDD 85


>UNIPROTKB|E5RFG4 [details] [associations]
            symbol:AHRR "Aryl hydrocarbon receptor repressor"
            species:9606 "Homo sapiens" [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0033235 "positive regulation of protein
            sumoylation" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112
            PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0000122
            GO:GO:0004871 Gene3D:4.10.280.10 EMBL:AC010442 EMBL:AC118458
            HGNC:HGNC:346 GO:GO:0033235 IPI:IPI00982017
            ProteinModelPortal:E5RFG4 SMR:E5RFG4 Ensembl:ENST00000510400
            ArrayExpress:E5RFG4 Bgee:E5RFG4 Uniprot:E5RFG4
        Length = 157

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 45/62 (72%), Positives = 52/62 (83%)

Query:     5 KPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             K  P  G  KSNPSKRHR+RLNAELD LA+LLPF  +I+SKLD+LS+LRLSVSYLR KS+
Sbjct:    20 KQRPAVGAEKSNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79

Query:    65 FQ 66
             FQ
Sbjct:    80 FQ 81


>UNIPROTKB|E5RGQ2 [details] [associations]
            symbol:AHRR "Aryl hydrocarbon receptor repressor"
            species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0033235 "positive
            regulation of protein sumoylation" evidence=IEA] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
            GO:GO:0000122 Gene3D:4.10.280.10 EMBL:AC010442 EMBL:AC118458
            HGNC:HGNC:346 GO:GO:0033235 IPI:IPI00982577
            ProteinModelPortal:E5RGQ2 SMR:E5RGQ2 Ensembl:ENST00000504625
            ArrayExpress:E5RGQ2 Bgee:E5RGQ2 Uniprot:E5RGQ2
        Length = 81

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 45/62 (72%), Positives = 52/62 (83%)

Query:     5 KPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             K  P  G  KSNPSKRHR+RLNAELD LA+LLPF  +I+SKLD+LS+LRLSVSYLR KS+
Sbjct:    20 KQRPAVGAEKSNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79

Query:    65 FQ 66
             FQ
Sbjct:    80 FQ 81


>UNIPROTKB|G3V143 [details] [associations]
            symbol:AHRR "Aryl hydrocarbon receptor repressor"
            species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
            EMBL:AC010442 EMBL:AC118458 EMBL:CH471235 HGNC:HGNC:346
            ProteinModelPortal:G3V143 SMR:G3V143 Ensembl:ENST00000515206
            ArrayExpress:G3V143 Bgee:G3V143 Uniprot:G3V143
        Length = 139

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 45/62 (72%), Positives = 52/62 (83%)

Query:     5 KPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             K  P  G  KSNPSKRHR+RLNAELD LA+LLPF  +I+SKLD+LS+LRLSVSYLR KS+
Sbjct:    20 KQRPAVGAEKSNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLSVSYLRVKSF 79

Query:    65 FQ 66
             FQ
Sbjct:    80 FQ 81


>UNIPROTKB|I3L5U3 [details] [associations]
            symbol:I3L5U3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
            EMBL:FP312884 Ensembl:ENSSSCT00000027011 OMA:SEGLIFY Uniprot:I3L5U3
        Length = 394

 Score = 227 (85.0 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    22 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 80

Query:    63 SYF 65
             S+F
Sbjct:    81 SFF 83


>UNIPROTKB|F1NLX8 [details] [associations]
            symbol:AHR "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0003705 "RNA polymerase
            II distal enhancer sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0004879 "ligand-activated
            sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006950 "response to
            stress" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0009410 "response to xenobiotic stimulus"
            evidence=IEA] [GO:0030850 "prostate gland development"
            evidence=IEA] [GO:0030888 "regulation of B cell proliferation"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045899 "positive regulation of RNA
            polymerase II transcriptional preinitiation complex assembly"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PROSITE:PS50112 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006950 GO:GO:0004879
            GO:GO:0043565 GO:GO:0003705 GO:GO:0000122 GO:GO:0044212
            SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
            GeneTree:ENSGT00700000104038 OMA:QQLCQKM GO:GO:0045899
            GO:GO:0030888 EMBL:AADN02000881 EMBL:AADN02000879 EMBL:AADN02000880
            IPI:IPI00583925 Ensembl:ENSGALT00000017616 Uniprot:F1NLX8
        Length = 839

 Score = 233 (87.1 bits), Expect = 2.4e-18, P = 2.4e-18
 Identities = 45/62 (72%), Positives = 56/62 (90%)

Query:     4 LKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKS 63
             +KP P +GV KSNPSKRHR+RLNAELD LA+LLPF Q++++KLD+LS+LRLSVSYLR KS
Sbjct:     1 VKPSPAEGV-KSNPSKRHRDRLNAELDRLASLLPFPQDVIAKLDKLSVLRLSVSYLRAKS 59

Query:    64 YF 65
             +F
Sbjct:    60 FF 61


>UNIPROTKB|G3V6M2 [details] [associations]
            symbol:Ahr "RCG61977, isoform CRA_b" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0004879
            "ligand-activated sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006950
            "response to stress" evidence=IEA] [GO:0008134 "transcription
            factor binding" evidence=IEA] [GO:0009410 "response to xenobiotic
            stimulus" evidence=IEA] [GO:0030850 "prostate gland development"
            evidence=IEA] [GO:0030888 "regulation of B cell proliferation"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045899 "positive regulation of RNA
            polymerase II transcriptional preinitiation complex assembly"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 RGD:2074 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
            OMA:QQLCQKM EMBL:CH473947 Ensembl:ENSRNOT00000006618 Uniprot:G3V6M2
        Length = 853

 Score = 231 (86.4 bits), Expect = 4.0e-18, P = 4.0e-18
 Identities = 44/63 (69%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q+++SKLD+LS+LRLSVSYLR K
Sbjct:    21 TVKPVPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVISKLDKLSVLRLSVSYLRAK 79

Query:    63 SYF 65
             S+F
Sbjct:    80 SFF 82


>RGD|2074 [details] [associations]
            symbol:Ahr "aryl hydrocarbon receptor" species:10116 "Rattus
          norvegicus" [GO:0000122 "negative regulation of transcription from
          RNA polymerase II promoter" evidence=ISO] [GO:0000902 "cell
          morphogenesis" evidence=ISO] [GO:0001541 "ovarian follicle
          development" evidence=IMP] [GO:0001568 "blood vessel development"
          evidence=ISO] [GO:0001569 "patterning of blood vessels" evidence=ISO]
          [GO:0001782 "B cell homeostasis" evidence=ISO] [GO:0001889 "liver
          development" evidence=ISO] [GO:0001974 "blood vessel remodeling"
          evidence=ISO] [GO:0002260 "lymphocyte homeostasis" evidence=ISO]
          [GO:0002376 "immune system process" evidence=ISO] [GO:0003085
          "negative regulation of systemic arterial blood pressure"
          evidence=ISO] [GO:0003214 "cardiac left ventricle morphogenesis"
          evidence=ISO] [GO:0003243 "circumferential growth involved in left
          ventricle morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
          evidence=ISO;TAS] [GO:0003700 "sequence-specific DNA binding
          transcription factor activity" evidence=ISO;TAS] [GO:0003705 "RNA
          polymerase II distal enhancer sequence-specific DNA binding
          transcription factor activity" evidence=ISO] [GO:0004874 "aryl
          hydrocarbon receptor activity" evidence=IDA;TAS] [GO:0004879
          "ligand-activated sequence-specific DNA binding RNA polymerase II
          transcription factor activity" evidence=ISO;IDA] [GO:0005515 "protein
          binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
          [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
          evidence=ISO;IDA;TAS] [GO:0006355 "regulation of transcription,
          DNA-dependent" evidence=ISO;IDA] [GO:0006357 "regulation of
          transcription from RNA polymerase II promoter" evidence=ISO]
          [GO:0006366 "transcription from RNA polymerase II promoter"
          evidence=ISO;IDA] [GO:0006915 "apoptotic process" evidence=ISO;TAS]
          [GO:0006950 "response to stress" evidence=ISO;IDA] [GO:0007049 "cell
          cycle" evidence=ISO;TAS] [GO:0008015 "blood circulation"
          evidence=ISO] [GO:0008134 "transcription factor binding"
          evidence=ISO] [GO:0009410 "response to xenobiotic stimulus"
          evidence=ISO;IDA;TAS] [GO:0009636 "response to toxic substance"
          evidence=ISO] [GO:0010468 "regulation of gene expression"
          evidence=ISO] [GO:0014070 "response to organic cyclic compound"
          evidence=IEP;IMP] [GO:0030522 "intracellular receptor mediated
          signaling pathway" evidence=ISO;IDA;TAS] [GO:0030850 "prostate gland
          development" evidence=ISO] [GO:0030888 "regulation of B cell
          proliferation" evidence=ISO] [GO:0032355 "response to estradiol
          stimulus" evidence=IEP] [GO:0035162 "embryonic hemopoiesis"
          evidence=ISO] [GO:0035166 "post-embryonic hemopoiesis" evidence=ISO]
          [GO:0040010 "positive regulation of growth rate" evidence=ISO]
          [GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043029
          "T cell homeostasis" evidence=ISO] [GO:0043565 "sequence-specific DNA
          binding" evidence=ISO] [GO:0044212 "transcription regulatory region
          DNA binding" evidence=ISO] [GO:0045793 "positive regulation of cell
          size" evidence=ISO] [GO:0045893 "positive regulation of
          transcription, DNA-dependent" evidence=ISO] [GO:0045899 "positive
          regulation of RNA polymerase II transcriptional preinitiation complex
          assembly" evidence=ISO] [GO:0045906 "negative regulation of
          vasoconstriction" evidence=ISO] [GO:0046982 "protein
          heterodimerization activity" evidence=ISO] [GO:0046983 "protein
          dimerization activity" evidence=IEA] [GO:0048514 "blood vessel
          morphogenesis" evidence=ISO] [GO:0048536 "spleen development"
          evidence=ISO] [GO:0048608 "reproductive structure development"
          evidence=ISO] [GO:0048732 "gland development" evidence=ISO]
          [GO:0048745 "smooth muscle tissue development" evidence=ISO]
          [GO:0050880 "regulation of blood vessel size" evidence=ISO]
          [GO:0051879 "Hsp90 protein binding" evidence=ISO] [GO:0060547
          "negative regulation of necrotic cell death" evidence=ISO]
          [GO:0060841 "venous blood vessel development" evidence=ISO]
          [GO:0060993 "kidney morphogenesis" evidence=ISO] [GO:0061009 "common
          bile duct development" evidence=ISO] [GO:0071320 "cellular response
          to cAMP" evidence=ISO] [GO:0071385 "cellular response to
          glucocorticoid stimulus" evidence=IEP] [GO:0072102 "glomerulus
          morphogenesis" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
          InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
          InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
          PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
          SMART:SM00353 InterPro:IPR001610 RGD:2074 GO:GO:0005829 GO:GO:0005634
          GO:GO:0006915 GO:GO:0006950 GO:GO:0032355 GO:GO:0003677 GO:GO:0004879
          GO:GO:0043565 GO:GO:0071385 GO:GO:0003705 GO:GO:0000122 GO:GO:0044212
          GO:GO:0007049 GO:GO:0001541 SMART:SM00086 GO:GO:0009410
          Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG253623 GO:GO:0004874
          CTD:196 HOGENOM:HOG000252935 HOVERGEN:HBG007313 KO:K09093
          OrthoDB:EOG42BX7X GO:GO:0045899 GO:GO:0030850 GO:GO:0030888
          EMBL:U09000 EMBL:U04860 EMBL:AF082124 EMBL:AF082125 EMBL:AF082126
          IPI:IPI00231916 IPI:IPI00364957 PIR:S58375 RefSeq:NP_037281.2
          UniGene:Rn.91370 ProteinModelPortal:P41738 IntAct:P41738
          STRING:P41738 PhosphoSite:P41738 PRIDE:P41738 GeneID:25690
          KEGG:rno:25690 UCSC:RGD:2074 InParanoid:P41738 BindingDB:P41738
          ChEMBL:CHEMBL5400 NextBio:607689 ArrayExpress:P41738
          Genevestigator:P41738 GermOnline:ENSRNOG00000004342 Uniprot:P41738
        Length = 853

 Score = 228 (85.3 bits), Expect = 8.3e-18, P = 8.3e-18
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    21 TVKPVPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 79

Query:    63 SYF 65
             S+F
Sbjct:    80 SFF 82


>UNIPROTKB|P35869 [details] [associations]
            symbol:AHR "Aryl hydrocarbon receptor" species:9606 "Homo
            sapiens" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0003705 "RNA polymerase
            II distal enhancer sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0030850 "prostate gland
            development" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045899 "positive regulation of RNA
            polymerase II transcriptional preinitiation complex assembly"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA;TAS]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0030888 "regulation of B cell
            proliferation" evidence=IDA] [GO:0010468 "regulation of gene
            expression" evidence=IDA] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0001568 "blood
            vessel development" evidence=NAS] [GO:0046982 "protein
            heterodimerization activity" evidence=TAS] [GO:0046983 "protein
            dimerization activity" evidence=TAS] [GO:0034752 "cytosolic aryl
            hydrocarbon receptor complex" evidence=TAS] [GO:0005667
            "transcription factor complex" evidence=TAS] [GO:0006805
            "xenobiotic metabolic process" evidence=TAS] [GO:0004879
            "ligand-activated sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0009410 "response to xenobiotic stimulus" evidence=IDA]
            [GO:0007049 "cell cycle" evidence=TAS] [GO:0006915 "apoptotic
            process" evidence=TAS] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0006950 "response to
            stress" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0051879 "Hsp90 protein binding" evidence=IDA]
            [GO:0030522 "intracellular receptor mediated signaling pathway"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0006915 GO:GO:0006950
            GO:GO:0032355 EMBL:CH471073 GO:GO:0004879 GO:GO:0043565
            GO:GO:0071385 EMBL:CH236948 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0044212 GO:GO:0007049 GO:GO:0006805
            GO:GO:0001541 GO:GO:0046982 SMART:SM00086 GO:GO:0001568
            Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG253623 EMBL:D16354
            EMBL:L19872 EMBL:AC003075 EMBL:BC069390 EMBL:BC070080 EMBL:U28063
            EMBL:U27656 EMBL:U27657 EMBL:U28060 EMBL:U28061 EMBL:U28062
            EMBL:U28064 EMBL:U28066 EMBL:U28065 EMBL:D38044 IPI:IPI00021008
            PIR:S59514 RefSeq:NP_001612.1 UniGene:Hs.171189 DisProt:DP00381
            ProteinModelPortal:P35869 SMR:P35869 DIP:DIP-946N IntAct:P35869
            STRING:P35869 PhosphoSite:P35869 DMDM:3041653 PaxDb:P35869
            PRIDE:P35869 Ensembl:ENST00000242057 Ensembl:ENST00000463496
            GeneID:196 KEGG:hsa:196 UCSC:uc011jxz.1 CTD:196
            GeneCards:GC07P017304 HGNC:HGNC:348 HPA:CAB005072 HPA:HPA029722
            HPA:HPA029723 MIM:600253 neXtProt:NX_P35869 PharmGKB:PA24641
            HOGENOM:HOG000252935 HOVERGEN:HBG007313 InParanoid:P35869 KO:K09093
            OMA:QQLCQKM OrthoDB:EOG42BX7X PhylomeDB:P35869 BindingDB:P35869
            ChEMBL:CHEMBL3201 ChiTaRS:AHR GenomeRNAi:196 NextBio:786
            Bgee:P35869 CleanEx:HS_AHR Genevestigator:P35869 GO:GO:0034752
            GO:GO:0051879 GO:GO:0045899 GO:GO:0030850 GO:GO:0030888
            Uniprot:P35869
        Length = 848

 Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    22 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 80

Query:    63 SYF 65
             S+F
Sbjct:    81 SFF 83


>UNIPROTKB|Q8R4S6 [details] [associations]
            symbol:Ahr "Aryl hydrocarbon receptor" species:10091 "Mus
            musculus castaneus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO;IDA;TAS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0004879 "ligand-activated
            sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=TAS]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006805 "xenobiotic metabolic process" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=ISS] [GO:0006950 "response
            to stress" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
            [GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
            [GO:0030522 "intracellular receptor mediated signaling pathway"
            evidence=ISS] [GO:0030850 "prostate gland development"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0045899 "positive regulation of
            RNA polymerase II transcriptional preinitiation complex assembly"
            evidence=IDA] [GO:0048608 "reproductive structure development"
            evidence=IMP] [GO:0048732 "gland development" evidence=IMP]
            InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005737
            GO:GO:0006915 GO:GO:0006950 GO:GO:0004879 GO:GO:0043565
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0007049
            GO:GO:0006805 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
            HOVERGEN:HBG007313 GO:GO:0045899 GO:GO:0030850 EMBL:AF405565
            UniGene:Mm.341377 ProteinModelPortal:Q8R4S6 SMR:Q8R4S6
            Uniprot:Q8R4S6
        Length = 848

 Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    21 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 79

Query:    63 SYF 65
             S+F
Sbjct:    80 SFF 82


>MGI|MGI:105043 [details] [associations]
            symbol:Ahr "aryl-hydrocarbon receptor" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IDA] [GO:0000902 "cell
            morphogenesis" evidence=IMP] [GO:0001541 "ovarian follicle
            development" evidence=ISO] [GO:0001568 "blood vessel development"
            evidence=IMP] [GO:0001569 "patterning of blood vessels"
            evidence=IMP] [GO:0001782 "B cell homeostasis" evidence=IMP;TAS]
            [GO:0001889 "liver development" evidence=IMP] [GO:0001922 "B-1 B
            cell homeostasis" evidence=TAS] [GO:0001974 "blood vessel
            remodeling" evidence=IMP] [GO:0002260 "lymphocyte homeostasis"
            evidence=IMP;TAS] [GO:0002376 "immune system process" evidence=IMP]
            [GO:0003085 "negative regulation of systemic arterial blood
            pressure" evidence=IMP] [GO:0003214 "cardiac left ventricle
            morphogenesis" evidence=IMP] [GO:0003243 "circumferential growth
            involved in left ventricle morphogenesis" evidence=IMP] [GO:0003677
            "DNA binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISO;IDA;TAS]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004874
            "aryl hydrocarbon receptor activity" evidence=ISO] [GO:0004879
            "ligand-activated sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=ISO;IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829
            "cytosol" evidence=ISO;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISO;IDA;TAS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=ISO;IDA] [GO:0006805 "xenobiotic metabolic
            process" evidence=TAS] [GO:0006915 "apoptotic process"
            evidence=IDA] [GO:0006950 "response to stress" evidence=ISO;IDA]
            [GO:0007049 "cell cycle" evidence=IDA] [GO:0007165 "signal
            transduction" evidence=IEA] [GO:0008015 "blood circulation"
            evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=ISO] [GO:0008217 "regulation of blood pressure"
            evidence=TAS] [GO:0009410 "response to xenobiotic stimulus"
            evidence=ISO;IDA] [GO:0009636 "response to toxic substance"
            evidence=IDA] [GO:0010468 "regulation of gene expression"
            evidence=ISO] [GO:0014070 "response to organic cyclic compound"
            evidence=ISO] [GO:0030183 "B cell differentiation" evidence=TAS]
            [GO:0030522 "intracellular receptor mediated signaling pathway"
            evidence=ISO] [GO:0030850 "prostate gland development"
            evidence=IMP] [GO:0030888 "regulation of B cell proliferation"
            evidence=ISO] [GO:0034751 "aryl hydrocarbon receptor complex"
            evidence=TAS] [GO:0034752 "cytosolic aryl hydrocarbon receptor
            complex" evidence=TAS] [GO:0034753 "nuclear aryl hydrocarbon
            receptor complex" evidence=TAS] [GO:0035162 "embryonic hemopoiesis"
            evidence=IMP] [GO:0035166 "post-embryonic hemopoiesis"
            evidence=IMP] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0043010 "camera-type eye development"
            evidence=IMP] [GO:0043029 "T cell homeostasis" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISO] [GO:0045793 "positive regulation of cell size"
            evidence=IMP] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0045899 "positive regulation of
            RNA polymerase II transcriptional preinitiation complex assembly"
            evidence=IDA] [GO:0045906 "negative regulation of vasoconstriction"
            evidence=IMP] [GO:0046982 "protein heterodimerization activity"
            evidence=IPI] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048514 "blood vessel morphogenesis"
            evidence=IMP] [GO:0048536 "spleen development" evidence=IMP]
            [GO:0048608 "reproductive structure development" evidence=IMP]
            [GO:0048732 "gland development" evidence=IMP] [GO:0048745 "smooth
            muscle tissue development" evidence=IMP] [GO:0050880 "regulation of
            blood vessel size" evidence=IMP] [GO:0051879 "Hsp90 protein
            binding" evidence=ISO;TAS] [GO:0060420 "regulation of heart growth"
            evidence=TAS] [GO:0060547 "negative regulation of necrotic cell
            death" evidence=IMP] [GO:0060841 "venous blood vessel development"
            evidence=IMP] [GO:0060993 "kidney morphogenesis" evidence=IMP]
            [GO:0061009 "common bile duct development" evidence=IMP]
            [GO:0071320 "cellular response to cAMP" evidence=IDA] [GO:0072102
            "glomerulus morphogenesis" evidence=IMP] InterPro:IPR000014
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005737 GO:GO:0006915
            GO:GO:0006950 GO:GO:0004879 GO:GO:0043565 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0007049 GO:GO:0006805
            SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG007313
            GO:GO:0045899 GO:GO:0030850 EMBL:AF405565 UniGene:Mm.341377
            ProteinModelPortal:Q8R4S6 SMR:Q8R4S6 Uniprot:Q8R4S6
        Length = 848

 Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    21 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 79

Query:    63 SYF 65
             S+F
Sbjct:    80 SFF 82


>UNIPROTKB|I3LF82 [details] [associations]
            symbol:AHR "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006950 GO:GO:0004879 GO:GO:0043565 GO:GO:0003705
            GO:GO:0000122 GO:GO:0044212 SMART:SM00086 GO:GO:0009410
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
            OMA:QQLCQKM GO:GO:0045899 GO:GO:0030850 GO:GO:0030888 EMBL:FP102833
            Ensembl:ENSSSCT00000031031 Uniprot:I3LF82
        Length = 849

 Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    22 NVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 80

Query:    63 SYF 65
             S+F
Sbjct:    81 SFF 83


>UNIPROTKB|E2QWU8 [details] [associations]
            symbol:AHR "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0004871 "signal transducer
            activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
            CTD:196 KO:K09093 OMA:QQLCQKM EMBL:AAEX03009350 RefSeq:XP_532485.2
            Ensembl:ENSCAFT00000003863 GeneID:475251 KEGG:cfa:475251
            Uniprot:E2QWU8
        Length = 853

 Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    22 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 80

Query:    63 SYF 65
             S+F
Sbjct:    81 SFF 83


>UNIPROTKB|Q8R4S2 [details] [associations]
            symbol:Ahr "Aryl hydrocarbon receptor" species:10096 "Mus
            spretus" [GO:0004879 "ligand-activated sequence-specific DNA
            binding RNA polymerase II transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0006915 "apoptotic process" evidence=ISS]
            [GO:0006950 "response to stress" evidence=ISS] [GO:0007049 "cell
            cycle" evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
            evidence=ISS] [GO:0030522 "intracellular receptor mediated
            signaling pathway" evidence=ISS] InterPro:IPR000014
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006915 GO:GO:0006950 GO:GO:0003677 GO:GO:0004879
            GO:GO:0007049 SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
            SUPFAM:SSF47459 HOVERGEN:HBG007313 EMBL:AF405571
            ProteinModelPortal:Q8R4S2 PRIDE:Q8R4S2 Uniprot:Q8R4S2
        Length = 854

 Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    21 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 79

Query:    63 SYF 65
             S+F
Sbjct:    80 SFF 82


>UNIPROTKB|Q8R4S4 [details] [associations]
            symbol:Ahr "Aryl hydrocarbon receptor" species:10103 "Mus
            spicilegus" [GO:0004879 "ligand-activated sequence-specific DNA
            binding RNA polymerase II transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0006915 "apoptotic process" evidence=ISS]
            [GO:0006950 "response to stress" evidence=ISS] [GO:0007049 "cell
            cycle" evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
            evidence=ISS] [GO:0030522 "intracellular receptor mediated
            signaling pathway" evidence=ISS] InterPro:IPR000014
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006915 GO:GO:0006950 GO:GO:0003677 GO:GO:0004879
            GO:GO:0007049 SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
            SUPFAM:SSF47459 HOVERGEN:HBG007313 EMBL:AF405569
            ProteinModelPortal:Q8R4S4 Uniprot:Q8R4S4
        Length = 854

 Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    21 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 79

Query:    63 SYF 65
             S+F
Sbjct:    80 SFF 82


>UNIPROTKB|Q8R4S7 [details] [associations]
            symbol:Ahr "Aryl hydrocarbon receptor" species:10089 "Mus
            caroli" [GO:0004879 "ligand-activated sequence-specific DNA binding
            RNA polymerase II transcription factor activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006915 "apoptotic process" evidence=ISS] [GO:0006950 "response
            to stress" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
            [GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
            [GO:0030522 "intracellular receptor mediated signaling pathway"
            evidence=ISS] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:105043
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006915 GO:GO:0006950
            GO:GO:0003677 GO:GO:0004879 GO:GO:0007049 SMART:SM00086
            GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG007313
            EMBL:AF405564 ProteinModelPortal:Q8R4S7 Uniprot:Q8R4S7
        Length = 854

 Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    21 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 79

Query:    63 SYF 65
             S+F
Sbjct:    80 SFF 82


>UNIPROTKB|Q8R4S5 [details] [associations]
            symbol:Ahr "Aryl hydrocarbon receptor" species:57486 "Mus
            musculus molossinus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO;IDA;TAS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0004879 "ligand-activated
            sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=TAS]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006805 "xenobiotic metabolic process" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=ISS] [GO:0006950 "response
            to stress" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
            [GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
            [GO:0030522 "intracellular receptor mediated signaling pathway"
            evidence=ISS] [GO:0030850 "prostate gland development"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0045899 "positive regulation of
            RNA polymerase II transcriptional preinitiation complex assembly"
            evidence=IDA] [GO:0048608 "reproductive structure development"
            evidence=IMP] [GO:0048732 "gland development" evidence=IMP]
            InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005737
            GO:GO:0006915 GO:GO:0006950 GO:GO:0004879 GO:GO:0043565
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0007049
            GO:GO:0006805 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
            HOVERGEN:HBG007313 GO:GO:0045899 GO:GO:0030850 UniGene:Mm.341377
            EMBL:AF405568 ProteinModelPortal:Q8R4S5 SMR:Q8R4S5 Uniprot:Q8R4S5
        Length = 883

 Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 43/63 (68%), Positives = 56/63 (88%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF Q++++KLD+LS+LRLSVSYLR K
Sbjct:    21 TVKPIPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAK 79

Query:    63 SYF 65
             S+F
Sbjct:    80 SFF 82


>UNIPROTKB|A9YTQ3 [details] [associations]
            symbol:AHRR "Aryl hydrocarbon receptor repressor"
            species:9606 "Homo sapiens" [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0033235 "positive regulation of protein
            sumoylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000014
            InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006351
            GO:GO:0000122 GO:GO:0004871 Gene3D:4.10.280.10 EMBL:AF293639
            EMBL:AF293629 EMBL:AF293630 EMBL:AF293631 EMBL:AF293632
            EMBL:AF293633 EMBL:AF293634 EMBL:AF293635 EMBL:AF293636
            EMBL:AF293637 EMBL:AF293638 EMBL:EU293605 EMBL:AB033060
            EMBL:AC010442 EMBL:AC118458 EMBL:CH471235 EMBL:BC151852
            EMBL:BC152406 IPI:IPI00718806 IPI:IPI00893051 IPI:IPI00893349
            RefSeq:NP_001229341.1 RefSeq:NP_065782.2 UniGene:Hs.50823
            ProteinModelPortal:A9YTQ3 SMR:A9YTQ3 STRING:A9YTQ3
            PhosphoSite:A9YTQ3 PaxDb:A9YTQ3 PRIDE:A9YTQ3 DNASU:57491
            Ensembl:ENST00000316418 Ensembl:ENST00000505113 GeneID:57491
            KEGG:hsa:57491 UCSC:uc003jav.3 UCSC:uc003jaw.3 CTD:57491
            GeneCards:GC05P000291 HGNC:HGNC:346 HPA:HPA019614 HPA:HPA021483
            MIM:606517 neXtProt:NX_A9YTQ3 PharmGKB:PA24639 eggNOG:NOG314160
            HOGENOM:HOG000033866 HOVERGEN:HBG073122 InParanoid:A9YTQ3 KO:K09094
            OMA:AEGMIFY GenomeRNAi:57491 NextBio:63778 ArrayExpress:A9YTQ3
            Bgee:A9YTQ3 Genevestigator:A9YTQ3 GO:GO:0033235 Uniprot:A9YTQ3
        Length = 701

 Score = 224 (83.9 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 45/62 (72%), Positives = 52/62 (83%)

Query:     5 KPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             K  P  G  KSNPSKRHR+RLNAELD LA+LLPF  +I+SKLD+LS+LRLSVSYLR KS+
Sbjct:    24 KQRPAVGAEKSNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLSVSYLRVKSF 83

Query:    65 FQ 66
             FQ
Sbjct:    84 FQ 85


>ZFIN|ZDB-GENE-990714-16 [details] [associations]
            symbol:ahr2 "aryl hydrocarbon receptor 2"
            species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0007165 "signal transduction"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IPI]
            [GO:0043565 "sequence-specific DNA binding" evidence=IPI]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IPI] [GO:0009410 "response to xenobiotic stimulus"
            evidence=IMP;IDA;IPI] [GO:0042221 "response to chemical stimulus"
            evidence=IGI;IDA;IMP] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0009636 "response to toxic substance" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 ZFIN:ZDB-GENE-990714-16 GO:GO:0005634
            GO:GO:0005737 GO:GO:0009636 GO:GO:0043565 GO:GO:0045944
            GO:GO:0006351 GO:GO:0004871 SMART:SM00086 GO:GO:0009410
            Gene3D:4.10.280.10 EMBL:AF063446 IPI:IPI00491298 RefSeq:NP_571339.1
            UniGene:Dr.79593 ProteinModelPortal:Q9YGV3 STRING:Q9YGV3
            GeneID:30517 KEGG:dre:30517 CTD:30517 HOVERGEN:HBG105620
            InParanoid:Q9YGV3 NextBio:20806903 ArrayExpress:Q9YGV3
            Uniprot:Q9YGV3
        Length = 1027

 Score = 226 (84.6 bits), Expect = 1.8e-17, P = 1.8e-17
 Identities = 42/61 (68%), Positives = 53/61 (86%)

Query:     5 KPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             KPPP DGV KSNPSKRHR+RLN+ELD L NLLPF +++ ++LD+LS+LRLSV YL+ KS+
Sbjct:    22 KPPPPDGV-KSNPSKRHRDRLNSELDKLTNLLPFSEDVRARLDKLSVLRLSVGYLKVKSF 80

Query:    65 F 65
             F
Sbjct:    81 F 81


>UNIPROTKB|F1ML85 [details] [associations]
            symbol:AHR "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            [GO:0045899 "positive regulation of RNA polymerase II
            transcriptional preinitiation complex assembly" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0030888 "regulation of B cell proliferation"
            evidence=IEA] [GO:0030850 "prostate gland development"
            evidence=IEA] [GO:0009410 "response to xenobiotic stimulus"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
            binding RNA polymerase II transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006950 GO:GO:0004879
            GO:GO:0043565 GO:GO:0003705 GO:GO:0000122 GO:GO:0044212
            SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
            GeneTree:ENSGT00700000104038 CTD:196 KO:K09093 OMA:QQLCQKM
            GO:GO:0045899 GO:GO:0030850 GO:GO:0030888 EMBL:DAAA02010042
            IPI:IPI00692346 RefSeq:NP_001192955.1 UniGene:Bt.13046 PRIDE:F1ML85
            Ensembl:ENSBTAT00000010187 GeneID:280714 KEGG:bta:280714
            NextBio:20804893 ArrayExpress:F1ML85 Uniprot:F1ML85
        Length = 844

 Score = 222 (83.2 bits), Expect = 3.6e-17, P = 3.6e-17
 Identities = 42/63 (66%), Positives = 55/63 (87%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++KP P +G+ KSNPSKRHR+RLN ELD LA+LLPF  ++++KLD+LS+LRLSVSYLR K
Sbjct:    22 TVKPVPAEGI-KSNPSKRHRDRLNTELDRLASLLPFPPDVINKLDKLSVLRLSVSYLRAK 80

Query:    63 SYF 65
             S+F
Sbjct:    81 SFF 83


>UNIPROTKB|F1NHD6 [details] [associations]
            symbol:AHRR "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0033235 "positive
            regulation of protein sumoylation" evidence=IEA] InterPro:IPR000014
            InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 GO:GO:0000122
            GO:GO:0004871 Gene3D:4.10.280.10 GO:GO:0033235
            GeneTree:ENSGT00700000104038 EMBL:AADN02008286 EMBL:AADN02008287
            IPI:IPI00573589 Ensembl:ENSGALT00000021857 OMA:LNRCFIC
            Uniprot:F1NHD6
        Length = 749

 Score = 220 (82.5 bits), Expect = 4.8e-17, P = 4.8e-17
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query:     8 PKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQ 66
             P  G  KSNPSKRHR+RLNAELD LA+LLPF  +I+SKLD+LS+LRLSVSYLR KS+FQ
Sbjct:    25 PAAGNEKSNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLSVSYLRVKSFFQ 83


>UNIPROTKB|F1MYT2 [details] [associations]
            symbol:AHRR "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0033235 "positive regulation of protein sumoylation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0004871 "signal
            transducer activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 GO:GO:0005634 GO:GO:0000122 GO:GO:0004871
            Gene3D:4.10.280.10 OMA:AEGMIFY GO:GO:0033235
            GeneTree:ENSGT00700000104038 EMBL:DAAA02051468 EMBL:DAAA02051469
            EMBL:DAAA02051470 EMBL:DAAA02051471 EMBL:DAAA02051472
            IPI:IPI00707767 Ensembl:ENSBTAT00000011351 Uniprot:F1MYT2
        Length = 729

 Score = 219 (82.2 bits), Expect = 5.9e-17, P = 5.9e-17
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:     5 KPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             K  P  G  KSNPSKRHR+RLNAELD LA+LLP   +I+SKLD+LS+LRLSVSYLR KS+
Sbjct:    54 KQRPAVGAEKSNPSKRHRDRLNAELDHLASLLPLPPDIISKLDKLSVLRLSVSYLRVKSF 113

Query:    65 FQEM 68
             FQ +
Sbjct:   114 FQAL 117


>MGI|MGI:1333776 [details] [associations]
            symbol:Ahrr "aryl-hydrocarbon receptor repressor"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006805 "xenobiotic metabolic process" evidence=TAS]
            [GO:0007165 "signal transduction" evidence=IEA] [GO:0009410
            "response to xenobiotic stimulus" evidence=IC] [GO:0033235
            "positive regulation of protein sumoylation" evidence=IDA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112
            PROSITE:PS50888 SMART:SM00091 SMART:SM00353 MGI:MGI:1333776
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006351
            GO:GO:0000122 GO:GO:0004871 GO:GO:0006805 Gene3D:4.10.280.10
            SUPFAM:SSF47459 CTD:57491 eggNOG:NOG314160 HOGENOM:HOG000033866
            HOVERGEN:HBG073122 KO:K09094 GO:GO:0033235 EMBL:AB015140
            EMBL:AK154152 EMBL:AK154761 EMBL:AK155711 EMBL:CT009486
            EMBL:AC123833 EMBL:BC118534 EMBL:AK173134 IPI:IPI00131310
            IPI:IPI00856961 IPI:IPI00894801 RefSeq:NP_033774.1
            UniGene:Mm.290446 ProteinModelPortal:Q3U1U7 SMR:Q3U1U7
            STRING:Q3U1U7 PhosphoSite:Q3U1U7 PRIDE:Q3U1U7
            Ensembl:ENSMUST00000022059 Ensembl:ENSMUST00000109640 GeneID:11624
            KEGG:mmu:11624 UCSC:uc007rev.1 UCSC:uc007rew.1 UCSC:uc007rex.1
            GeneTree:ENSGT00700000104038 InParanoid:Q3U1U7 OrthoDB:EOG4TF0JW
            NextBio:279175 Bgee:Q3U1U7 Genevestigator:Q3U1U7 Uniprot:Q3U1U7
        Length = 701

 Score = 217 (81.4 bits), Expect = 9.1e-17, P = 9.1e-17
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query:    11 GVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQEM 68
             G  KSNPSKRHR+RLN ELD LA+LLPF  +I+SKLD+LS+LRLSVSYLR KS+FQ +
Sbjct:    27 GAEKSNPSKRHRDRLNTELDHLASLLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQAL 84


>RGD|1559857 [details] [associations]
            symbol:Ahrr "aryl-hydrocarbon receptor repressor" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0033235 "positive
            regulation of protein sumoylation" evidence=IEA;ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112 PROSITE:PS50888
            SMART:SM00091 SMART:SM00353 RGD:1559857 GO:GO:0005634 GO:GO:0005737
            GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
            Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:57491 eggNOG:NOG314160
            HOGENOM:HOG000033866 HOVERGEN:HBG073122 KO:K09094 OMA:AEGMIFY
            GO:GO:0033235 GeneTree:ENSGT00700000104038 OrthoDB:EOG4TF0JW
            EMBL:AY367561 EMBL:AB174900 IPI:IPI00204172 RefSeq:NP_001019456.1
            UniGene:Rn.145524 ProteinModelPortal:Q75NT5 STRING:Q75NT5
            PhosphoSite:Q75NT5 PRIDE:Q75NT5 Ensembl:ENSRNOT00000019806
            GeneID:498999 KEGG:rno:498999 UCSC:RGD:1559857 InParanoid:Q75NT5
            NextBio:701519 Genevestigator:Q75NT5 Uniprot:Q75NT5
        Length = 701

 Score = 217 (81.4 bits), Expect = 9.1e-17, P = 9.1e-17
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query:    11 GVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQEM 68
             G  KSNPSKRHR+RLN ELD LA+LLPF  +I+SKLD+LS+LRLSVSYLR KS+FQ +
Sbjct:    27 GTEKSNPSKRHRDRLNTELDHLASLLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQAL 84


>ZFIN|ZDB-GENE-050922-1 [details] [associations]
            symbol:ahr1b "aryl hydrocarbon receptor 1b"
            species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0007165 "signal transduction"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0042221 "response to chemical stimulus"
            evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-050922-1
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0042221
            GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
            GeneTree:ENSGT00700000104038 HOVERGEN:HBG007313 KO:K09093
            EMBL:BX908726 EMBL:CR394522 EMBL:DQ016494 IPI:IPI00498003
            RefSeq:NP_001019987.1 UniGene:Dr.93042 STRING:Q4U3K9
            Ensembl:ENSDART00000028787 GeneID:554265 KEGG:dre:554265 CTD:554265
            InParanoid:Q4U3K9 OMA:HDNSKAT NextBio:20880738 Uniprot:Q4U3K9
        Length = 940

 Score = 217 (81.4 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 42/63 (66%), Positives = 54/63 (85%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             ++K PP +GV KSNPSKRHR+RLN+ELD L++LLPF + + S LD+LSILRLSVSYLR K
Sbjct:    14 TVKQPPAEGV-KSNPSKRHRDRLNSELDRLSSLLPFPEEVTSSLDKLSILRLSVSYLRAK 72

Query:    63 SYF 65
             ++F
Sbjct:    73 NFF 75


>ZFIN|ZDB-GENE-051018-2 [details] [associations]
            symbol:ahrrb "aryl-hydrocarbon receptor repressor b"
            species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0042221
            "response to chemical stimulus" evidence=IDA] InterPro:IPR000014
            InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
            Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
            SMART:SM00091 SMART:SM00353 ZFIN:ZDB-GENE-051018-2 GO:GO:0005737
            GO:GO:0003677 GO:GO:0042221 GO:GO:0003700 GO:GO:0006357
            GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 Gene3D:4.10.280.10
            HOVERGEN:HBG073122 KO:K09094 EMBL:AY928204 IPI:IPI00483748
            RefSeq:NP_001029092.1 UniGene:Dr.48245 ProteinModelPortal:Q3T2L2
            STRING:Q3T2L2 GeneID:565319 KEGG:dre:565319 CTD:565319
            InParanoid:Q3T2L2 NextBio:20885825 Uniprot:Q3T2L2
        Length = 573

 Score = 209 (78.6 bits), Expect = 4.6e-16, P = 4.6e-16
 Identities = 40/62 (64%), Positives = 50/62 (80%)

Query:     5 KPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             K  P+    KSNPSKRHR+RLNAELD L +LLPF   +++KLD+LS+LRLSVS+LR KS+
Sbjct:    20 KQKPEKADQKSNPSKRHRDRLNAELDRLGSLLPFSAEVITKLDKLSVLRLSVSFLRVKSF 79

Query:    65 FQ 66
             FQ
Sbjct:    80 FQ 81


>WB|WBGene00000096 [details] [associations]
            symbol:ahr-1 species:6239 "Caenorhabditis elegans"
            [GO:0004871 "signal transducer activity" evidence=IEA;ISS]
            [GO:0007165 "signal transduction" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0009410 "response to xenobiotic stimulus" evidence=IDA]
            [GO:0030522 "intracellular receptor mediated signaling pathway"
            evidence=TAS] [GO:0005622 "intracellular" evidence=TAS] [GO:0004874
            "aryl hydrocarbon receptor activity" evidence=ISS] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0001085 "RNA polymerase II transcription
            factor binding" evidence=IPI] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            GO:GO:0005634 GO:GO:0007399 GO:GO:0006355 GO:GO:0003677
            GO:GO:0007610 GO:GO:0006351 GO:GO:0005622 GO:GO:0009410
            GeneTree:ENSGT00700000104038 EMBL:AF039570 EMBL:Z81048 PIR:T19898
            RefSeq:NP_001021036.1 RefSeq:NP_001021037.1 UniGene:Cel.19551
            ProteinModelPortal:O44712 SMR:O44712 IntAct:O44712 STRING:O44712
            EnsemblMetazoa:C41G7.5a GeneID:172788 KEGG:cel:CELE_C41G7.5
            UCSC:C41G7.5a CTD:172788 WormBase:C41G7.5a WormBase:C41G7.5b
            eggNOG:NOG253623 InParanoid:O44712 OMA:FLQCKAH NextBio:877003
            GO:GO:0004874 Uniprot:O44712
        Length = 602

 Score = 197 (74.4 bits), Expect = 9.8e-15, P = 9.8e-15
 Identities = 36/63 (57%), Positives = 54/63 (85%)

Query:     4 LKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKS 63
             ++ PPK  +T +NPSKRHRERLN EL+T+A LLP++ + +S+LD+LS+LRL+VS+L+ K+
Sbjct:    14 VRDPPKQ-LTNTNPSKRHRERLNGELETVAMLLPYDSSTISRLDKLSVLRLAVSFLQCKA 72

Query:    64 YFQ 66
             +FQ
Sbjct:    73 HFQ 75


>ZFIN|ZDB-GENE-051018-1 [details] [associations]
            symbol:ahrra "aryl-hydrocarbon receptor repressor a"
            species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0007165 "signal transduction"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0042221 "response to chemical stimulus" evidence=IDA]
            InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112 PROSITE:PS50888
            SMART:SM00091 SMART:SM00353 ZFIN:ZDB-GENE-051018-1 GO:GO:0005634
            GO:GO:0003677 GO:GO:0042221 GO:GO:0006357 GO:GO:0006351
            GO:GO:0004871 Gene3D:4.10.280.10 eggNOG:NOG314160
            HOVERGEN:HBG073122 EMBL:AY928203 IPI:IPI00654472
            RefSeq:NP_001030342.1 UniGene:Dr.48244 ProteinModelPortal:Q3T2L3
            STRING:Q3T2L3 GeneID:641291 KEGG:dre:641291 CTD:641291
            NextBio:20901520 Uniprot:Q3T2L3
        Length = 550

 Score = 189 (71.6 bits), Expect = 6.1e-14, P = 6.1e-14
 Identities = 38/51 (74%), Positives = 44/51 (86%)

Query:    14 KSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             KSNPSKRHRERLNAEL+ LA LLPF  + + KLD+LS+LRLSVSYLR KS+
Sbjct:    30 KSNPSKRHRERLNAELERLAELLPFGPDTVCKLDKLSVLRLSVSYLRIKSF 80


>UNIPROTKB|E1C4K6 [details] [associations]
            symbol:LOC424033 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
            GeneTree:ENSGT00700000104038 EMBL:AADN02034423 EMBL:AADN02034424
            IPI:IPI00812541 Ensembl:ENSGALT00000008831 OMA:CMERNFT
            Uniprot:E1C4K6
        Length = 755

 Score = 182 (69.1 bits), Expect = 5.8e-13, P = 5.8e-13
 Identities = 36/62 (58%), Positives = 47/62 (75%)

Query:     3 SLKPPPKDGVTKSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTK 62
             S KP P +GV KSNPSKRHR+RLN EL+ L  LLPF ++  ++ D+LS LRL+V YL+ K
Sbjct:    14 SPKPSPPEGV-KSNPSKRHRDRLNEELNKLTGLLPFPEDACTRFDKLSTLRLAVGYLKVK 72

Query:    63 SY 64
             +Y
Sbjct:    73 NY 74


>UNIPROTKB|E1BY63 [details] [associations]
            symbol:LOC100859347 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 GO:GO:0004871 SMART:SM00086
            GeneTree:ENSGT00700000104038 EMBL:AADN02034423 IPI:IPI00598982
            Ensembl:ENSGALT00000006889 ArrayExpress:E1BY63 Uniprot:E1BY63
        Length = 586

 Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 34/53 (64%), Positives = 44/53 (83%)

Query:    14 KSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQ 66
             +SNPSKRHRERLN EL+ LA LLPF + + + LD+LSILRLS ++LR KS+F+
Sbjct:    22 RSNPSKRHRERLNRELERLAALLPFPEEVAAGLDKLSILRLSAAFLRAKSFFR 74


>UNIPROTKB|F1NWS4 [details] [associations]
            symbol:LOC100859347 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 GO:GO:0004871 SMART:SM00086
            GeneTree:ENSGT00700000104038 OMA:SEGLIFY EMBL:AADN02034423
            IPI:IPI00587681 Ensembl:ENSGALT00000006888 ArrayExpress:F1NWS4
            Uniprot:F1NWS4
        Length = 588

 Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 34/53 (64%), Positives = 44/53 (83%)

Query:    14 KSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQ 66
             +SNPSKRHRERLN EL+ LA LLPF + + + LD+LSILRLS ++LR KS+F+
Sbjct:    23 RSNPSKRHRERLNRELERLAALLPFPEEVAAGLDKLSILRLSAAFLRAKSFFR 75


>ZFIN|ZDB-GENE-020531-2 [details] [associations]
            symbol:ahr1a "aryl hydrocarbon receptor 1a"
            species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
            "signal transduction" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0042221 "response
            to chemical stimulus" evidence=IGI] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
            PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            ZFIN:ZDB-GENE-020531-2 GO:GO:0005737 GO:GO:0003677 GO:GO:0042221
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
            SMART:SM00086 Gene3D:4.10.280.10 GeneTree:ENSGT00700000104038
            EMBL:BX511151 IPI:IPI00866185 Ensembl:ENSDART00000049830
            ArrayExpress:F1R5Y6 Bgee:F1R5Y6 Uniprot:F1R5Y6
        Length = 808

 Score = 176 (67.0 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 35/53 (66%), Positives = 44/53 (83%)

Query:    14 KSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQ 66
             KSNPSKRHR+R+N  L +LA  +PF Q I+S LD+L+ILRLSVSYLR KS+F+
Sbjct:    46 KSNPSKRHRDRMNEVLASLAREIPFPQEIVSTLDKLTILRLSVSYLRAKSHFK 98


>UNIPROTKB|F1NTI6 [details] [associations]
            symbol:SIM1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
            EMBL:AADN02002234 EMBL:AADN02002235 EMBL:AADN02002236
            EMBL:AADN02002237 IPI:IPI00585345 Ensembl:ENSGALT00000037235
            Uniprot:F1NTI6
        Length = 87

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N ++  RE+ N+E   LA LLP    I S+LD+ SI+RL+ SYL+ +  F E
Sbjct:     7 NAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPE 58


>UNIPROTKB|E1BSJ1 [details] [associations]
            symbol:SIM2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0009880
            "embryonic pattern specification" evidence=IEA] [GO:0030324 "lung
            development" evidence=IEA] [GO:0046982 "protein heterodimerization
            activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
            Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
            PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
            GeneTree:ENSGT00700000104038 EMBL:AADN02010800 IPI:IPI00597363
            Ensembl:ENSGALT00000025849 OMA:FEPQDLI Uniprot:E1BSJ1
        Length = 419

 Score = 113 (44.8 bits), Expect = 6.2e-06, P = 6.2e-06
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N +K  RE+ N E   LA LLP    I S+LD+ SI+RL+ SYL+ ++ F E
Sbjct:     7 NAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPE 58


>UNIPROTKB|E2RDR2 [details] [associations]
            symbol:SIM2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
            SMART:SM00086 GeneTree:ENSGT00700000104038 OMA:KKPMLPA
            EMBL:AAEX03016522 Ensembl:ENSCAFT00000015386 Uniprot:E2RDR2
        Length = 562

 Score = 113 (44.8 bits), Expect = 9.6e-06, P = 9.6e-06
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N +K  RE+ N E   LA LLP    I S+LD+ SI+RL+ SYL+ ++ F E
Sbjct:     7 NAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPE 58


>RGD|1308016 [details] [associations]
            symbol:Sim2 "single-minded homolog 2 (Drosophila)" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0009880 "embryonic
            pattern specification" evidence=IEA;ISO] [GO:0030324 "lung
            development" evidence=IEA;ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR000014 InterPro:IPR010578
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 RGD:1308016 GO:GO:0005634 GO:GO:0003677
            GO:GO:0030324 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
            GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00700000104038
            GO:GO:0009880 KO:K09100 CTD:6493 OrthoDB:EOG43N7CB EMBL:CH474083
            IPI:IPI00362902 RefSeq:NP_001100578.1 UniGene:Rn.113883
            Ensembl:ENSRNOT00000002294 GeneID:304071 KEGG:rno:304071
            UCSC:RGD:1308016 NextBio:652548 Uniprot:D4AA36
        Length = 656

 Score = 113 (44.8 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N +K  RE+ N E   LA LLP    I S+LD+ SI+RL+ SYL+ ++ F E
Sbjct:     7 NAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPE 58


>MGI|MGI:98307 [details] [associations]
            symbol:Sim2 "single-minded homolog 2 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IGI]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
            transduction" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0009880 "embryonic pattern specification"
            evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0030324 "lung development" evidence=IMP] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
            PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 MGI:MGI:98307 GO:GO:0005634 GO:GO:0007399
            GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
            GO:GO:0006351 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
            GeneTree:ENSGT00700000104038 GO:GO:0009880 eggNOG:NOG310284
            HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 CTD:6493
            OMA:KKPMLPA OrthoDB:EOG43N7CB EMBL:U42554 EMBL:D63383 EMBL:U40576
            EMBL:AF023873 EMBL:AF023864 EMBL:AF023865 EMBL:AF023869
            EMBL:AF023871 EMBL:AF023870 EMBL:AF023868 EMBL:AF023867
            EMBL:AF023866 EMBL:AF023872 EMBL:D64135 IPI:IPI00117078
            RefSeq:NP_035507.2 UniGene:Mm.4775 ProteinModelPortal:Q61079
            SMR:Q61079 IntAct:Q61079 STRING:Q61079 PhosphoSite:Q61079
            PRIDE:Q61079 Ensembl:ENSMUST00000072182 GeneID:20465 KEGG:mmu:20465
            UCSC:uc008aae.1 InParanoid:Q61079 NextBio:298563 Bgee:Q61079
            CleanEx:MM_SIM2 Genevestigator:Q61079 Uniprot:Q61079
        Length = 657

 Score = 113 (44.8 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N +K  RE+ N E   LA LLP    I S+LD+ SI+RL+ SYL+ ++ F E
Sbjct:     7 NAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPE 58


>UNIPROTKB|Q14190 [details] [associations]
            symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0009880 "embryonic pattern specification"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000014 InterPro:IPR010578
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399
            GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 EMBL:CH471079
            GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
            SMART:SM00086 GO:GO:0009880 EMBL:AP000697 EMBL:AP001726
            eggNOG:NOG310284 HOVERGEN:HBG003936 KO:K09100 EMBL:U80456
            EMBL:U80457 EMBL:AB003185 EMBL:BC110444 EMBL:D85922 EMBL:D44444
            EMBL:D44445 EMBL:D44446 EMBL:D44447 EMBL:D44448 EMBL:AJ001858
            EMBL:X84790 EMBL:D70838 IPI:IPI00029105 IPI:IPI00220895 PIR:A58520
            PIR:I78525 PIR:I78526 RefSeq:NP_005060.1 RefSeq:NP_033664.2
            UniGene:Hs.146186 ProteinModelPortal:Q14190 SMR:Q14190
            IntAct:Q14190 STRING:Q14190 PhosphoSite:Q14190 DMDM:2851630
            PaxDb:Q14190 PRIDE:Q14190 Ensembl:ENST00000290399
            Ensembl:ENST00000430056 GeneID:6493 KEGG:hsa:6493 UCSC:uc002yvq.3
            UCSC:uc002yvr.2 CTD:6493 GeneCards:GC21P038071 HGNC:HGNC:10883
            HPA:HPA029295 MIM:600892 neXtProt:NX_Q14190 PharmGKB:PA35783
            InParanoid:Q14190 OMA:KKPMLPA OrthoDB:EOG43N7CB PhylomeDB:Q14190
            GenomeRNAi:6493 NextBio:25235 Bgee:Q14190 CleanEx:HS_SIM2
            Genevestigator:Q14190 GermOnline:ENSG00000159263 Uniprot:Q14190
        Length = 667

 Score = 113 (44.8 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N +K  RE+ N E   LA LLP    I S+LD+ SI+RL+ SYL+ ++ F E
Sbjct:     7 NAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPE 58


>ZFIN|ZDB-GENE-010803-1 [details] [associations]
            symbol:sim2 "single-minded homolog 2 (Drosophila)"
            species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007165 "signal transduction"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 ZFIN:ZDB-GENE-010803-1 GO:GO:0005737
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
            GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 HSSP:Q99814
            eggNOG:NOG310284 OrthoDB:EOG4QC14V CTD:6493 EMBL:BC065360
            EMBL:AF363019 IPI:IPI00487129 RefSeq:NP_571911.1 UniGene:Dr.15420
            GeneID:114450 KEGG:dre:114450 InParanoid:Q8UVV3 OMA:ANIEPEM
            NextBio:20796935 Uniprot:Q8UVV3
        Length = 585

 Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N +K  RE+ N E   LA LLP    I S+LD+ SI+RL+ SYL+ ++ F +
Sbjct:     7 NAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPD 58


>MGI|MGI:98306 [details] [associations]
            symbol:Sim1 "single-minded homolog 1 (Drosophila)"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA;IDA]
            [GO:0007165 "signal transduction" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
            PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            MGI:MGI:98306 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
            GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104038 GO:GO:0001657 eggNOG:NOG310284
            HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V
            CTD:6492 OMA:NSMPHIT EMBL:U40575 EMBL:AF038857 EMBL:AF038853
            EMBL:AF038854 EMBL:AF038856 EMBL:AF044913 EMBL:AF038855 EMBL:D79209
            EMBL:AB013491 IPI:IPI00117015 RefSeq:NP_035506.2 UniGene:Mm.4774
            ProteinModelPortal:Q61045 SMR:Q61045 IntAct:Q61045 STRING:Q61045
            PhosphoSite:Q61045 PRIDE:Q61045 DNASU:20464
            Ensembl:ENSMUST00000020071 GeneID:20464 KEGG:mmu:20464
            UCSC:uc007fal.1 InParanoid:Q61045 NextBio:298559 Bgee:Q61045
            CleanEx:MM_SIM1 Genevestigator:Q61045 GermOnline:ENSMUSG00000019913
            Uniprot:Q61045
        Length = 765

 Score = 108 (43.1 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N ++  RE+ N+E   LA LLP    I S+LD+ SI+RL+ SYL+ +  F E
Sbjct:     7 NAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPE 58


>RGD|1309949 [details] [associations]
            symbol:Sim1 "single-minded homolog 1 (Drosophila)" species:10116
            "Rattus norvegicus" [GO:0001657 "ureteric bud development"
            evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0008150
            "biological_process" evidence=ND] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA;ISO] InterPro:IPR000014
            InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:1309949
            GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104038 GO:GO:0001657 EMBL:CH474025 KO:K09100
            OrthoDB:EOG4QC14V CTD:6492 OMA:NSMPHIT IPI:IPI00361456
            RefSeq:NP_001101111.1 UniGene:Rn.165946 Ensembl:ENSRNOT00000057010
            GeneID:309888 KEGG:rno:309888 UCSC:RGD:1309949 NextBio:661438
            Uniprot:D3ZMU8
        Length = 765

 Score = 108 (43.1 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N ++  RE+ N+E   LA LLP    I S+LD+ SI+RL+ SYL+ +  F E
Sbjct:     7 NAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPE 58


>UNIPROTKB|E1C5G3 [details] [associations]
            symbol:SIM1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0001657 "ureteric bud development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
            activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR010578
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:AADN02002234
            KO:K09100 CTD:6492 OMA:NSMPHIT EMBL:AADN02002235 EMBL:AADN02002236
            EMBL:AADN02002237 IPI:IPI00821218 RefSeq:XP_419817.2
            UniGene:Gga.31324 Ensembl:ENSGALT00000024939 GeneID:396129
            KEGG:gga:396129 NextBio:20816186 Uniprot:E1C5G3
        Length = 766

 Score = 108 (43.1 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N ++  RE+ N+E   LA LLP    I S+LD+ SI+RL+ SYL+ +  F E
Sbjct:     7 NAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPE 58


>UNIPROTKB|F1N178 [details] [associations]
            symbol:SIM1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
            "ureteric bud development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
            SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
            EMBL:DAAA02026200 EMBL:DAAA02026201 IPI:IPI00999630
            UniGene:Bt.106531 Ensembl:ENSBTAT00000002960 NextBio:20877091
            Uniprot:F1N178
        Length = 766

 Score = 108 (43.1 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N ++  RE+ N+E   LA LLP    I S+LD+ SI+RL+ SYL+ +  F E
Sbjct:     7 NAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPE 58


>UNIPROTKB|E2QWV9 [details] [associations]
            symbol:SIM1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
            "ureteric bud development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
            SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104038 GO:GO:0001657 KO:K09100 CTD:6492
            OMA:NSMPHIT EMBL:AAEX03008562 RefSeq:XP_539058.2
            ProteinModelPortal:E2QWV9 Ensembl:ENSCAFT00000005680 GeneID:481937
            KEGG:cfa:481937 NextBio:20856645 Uniprot:E2QWV9
        Length = 766

 Score = 108 (43.1 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N ++  RE+ N+E   LA LLP    I S+LD+ SI+RL+ SYL+ +  F E
Sbjct:     7 NAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPE 58


>UNIPROTKB|P81133 [details] [associations]
            symbol:SIM1 "Single-minded homolog 1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0001657 "ureteric bud
            development" evidence=IEA] [GO:0046982 "protein heterodimerization
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
            PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
            SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001657
            EMBL:Z86062 eggNOG:NOG310284 HOGENOM:HOG000236298
            HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V EMBL:U70212
            EMBL:AL121948 IPI:IPI00292234 RefSeq:NP_005059.2 UniGene:Hs.520293
            ProteinModelPortal:P81133 SMR:P81133 STRING:P81133
            PhosphoSite:P81133 DMDM:109940166 PRIDE:P81133 DNASU:6492
            Ensembl:ENST00000262901 Ensembl:ENST00000369208 GeneID:6492
            KEGG:hsa:6492 UCSC:uc003pqj.4 CTD:6492 GeneCards:GC06M100882
            HGNC:HGNC:10882 HPA:HPA002084 HPA:HPA024385 MIM:603128
            neXtProt:NX_P81133 Orphanet:171829 PharmGKB:PA35782
            InParanoid:P81133 OMA:NSMPHIT PhylomeDB:P81133 ChiTaRS:SIM1
            GenomeRNAi:6492 NextBio:25231 Bgee:P81133 CleanEx:HS_SIM1
            Genevestigator:P81133 GermOnline:ENSG00000112246 Uniprot:P81133
        Length = 766

 Score = 108 (43.1 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N ++  RE+ N+E   LA LLP    I S+LD+ SI+RL+ SYL+ +  F E
Sbjct:     7 NAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPE 58


>UNIPROTKB|F1RYR5 [details] [associations]
            symbol:SIM1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
            "ureteric bud development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
            SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
            EMBL:CU024902 Ensembl:ENSSSCT00000004814 Uniprot:F1RYR5
        Length = 767

 Score = 108 (43.1 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N ++  RE+ N+E   LA LLP    I S+LD+ SI+RL+ SYL+ +  F E
Sbjct:     7 NAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPE 58


>UNIPROTKB|E9PKF0 [details] [associations]
            symbol:ARNTL "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:9606 "Homo sapiens"
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000060 "protein import
            into nucleus, translocation" evidence=IEA] [GO:0000982 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0001190
            "RNA polymerase II transcription factor binding transcription
            factor activity involved in positive regulation of transcription"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
            body" evidence=IEA] [GO:0032922 "circadian regulation of gene
            expression" evidence=IEA] [GO:0042176 "regulation of protein
            catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
            factor binding" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] InterPro:IPR001067
            InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
            SMART:SM00353 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
            GO:GO:0005667 GO:GO:0000060 GO:GO:0000982 GO:GO:0001190
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042176 EMBL:AC016884
            EMBL:AC022878 IPI:IPI00413132 HGNC:HGNC:701
            ProteinModelPortal:E9PKF0 SMR:E9PKF0 Ensembl:ENST00000529388
            ArrayExpress:E9PKF0 Bgee:E9PKF0 Uniprot:E9PKF0
        Length = 135

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>UNIPROTKB|E9PPV4 [details] [associations]
            symbol:ARNTL "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:9606 "Homo sapiens"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] InterPro:IPR001067
            InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
            SMART:SM00353 GO:GO:0005737 GO:GO:0003700 GO:GO:0005667
            Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884 EMBL:AC022878
            HGNC:HGNC:701 IPI:IPI00978797 ProteinModelPortal:E9PPV4 SMR:E9PPV4
            Ensembl:ENST00000530357 ArrayExpress:E9PPV4 Bgee:E9PPV4
            Uniprot:E9PPV4
        Length = 141

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    35 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 81


>UNIPROTKB|Q9DG35 [details] [associations]
            symbol:BMAL1 "BHLH-PAS transcription factor BMAL1"
            species:9031 "Gallus gallus" [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0000060 "protein import into nucleus, translocation"
            evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0017162
            "aryl hydrocarbon receptor binding" evidence=IEA] [GO:0032922
            "circadian regulation of gene expression" evidence=IEA] [GO:0042176
            "regulation of protein catabolic process" evidence=IEA] [GO:0043425
            "bHLH transcription factor binding" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0051879
            "Hsp90 protein binding" evidence=IEA] InterPro:IPR000014
            InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
            PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
            GO:GO:0003677 GO:GO:0007623 GO:GO:0005667 GO:GO:0000060
            GO:GO:0004871 GO:GO:0000982 TIGRFAMs:TIGR00229 GO:GO:0001190
            GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0042176 HOVERGEN:HBG000164 UniGene:Gga.1329 EMBL:AADN02030623
            EMBL:AF193070 IPI:IPI00679553 STRING:Q9DG35
            Ensembl:ENSGALT00000008634 HOGENOM:HOG000199297 InParanoid:Q9DG35
            Uniprot:Q9DG35
        Length = 127

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 17/43 (39%), Positives = 33/43 (76%)

Query:    19 KRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:     3 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 45


>UNIPROTKB|F1NJ70 [details] [associations]
            symbol:F1NJ70 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104726 EMBL:AADN02003372 IPI:IPI00679423
            Ensembl:ENSGALT00000032583 OMA:NTEFYEL Uniprot:F1NJ70
        Length = 82

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 22/52 (42%), Positives = 32/52 (61%)

Query:    14 KSNPSKRHRE-RLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             KS  + R R  + N E   LA LLP    I S+LD+ SI+RL++SYL+ + +
Sbjct:     9 KSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDF 60


>FB|FBgn0004666 [details] [associations]
            symbol:sim "single-minded" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007418
            "ventral midline development" evidence=IMP] [GO:0000978 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0000982 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IPI]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS;IPI] [GO:0007417 "central nervous system
            development" evidence=NAS] [GO:0007398 "ectoderm development"
            evidence=TAS] [GO:0007628 "adult walking behavior"
            evidence=IMP;TAS] [GO:0040011 "locomotion" evidence=TAS]
            [GO:0007420 "brain development" evidence=IMP] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0007165 "signal
            transduction" evidence=IEA] [GO:0007419 "ventral cord development"
            evidence=IMP] [GO:0035225 "determination of genital disc
            primordium" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007411 "axon guidance"
            evidence=IMP] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
            GO:GO:0007411 GO:GO:0007420 GO:GO:0007419 GO:GO:0045944
            GO:GO:0005667 GO:GO:0035225 GO:GO:0000978 GO:GO:0004871
            GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
            GO:GO:0007398 GO:GO:0007628 GO:GO:0007418 eggNOG:NOG310284
            KO:K09100 EMBL:AF071934 EMBL:AY129457 EMBL:M19020 PIR:A29945
            PIR:A41647 RefSeq:NP_524340.2 RefSeq:NP_731771.3 UniGene:Dm.4557
            ProteinModelPortal:P05709 SMR:P05709 STRING:P05709 GeneID:41612
            KEGG:dme:Dmel_CG7771 CTD:41612 FlyBase:FBgn0004666
            InParanoid:P05709 OrthoDB:EOG4MPG5H GenomeRNAi:41612 NextBio:824647
            Bgee:P05709 GermOnline:CG7771 Uniprot:P05709
        Length = 697

 Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 21/52 (40%), Positives = 32/52 (61%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N ++  RE+ N E   LA LLP    I S+LD+ S++RL+ SYL+ +  F +
Sbjct:    31 NAARTRREKENTEFCELAKLLPLPAAITSQLDKASVIRLTTSYLKMRQVFPD 82


>UNIPROTKB|E1BVD7 [details] [associations]
            symbol:E1BVD7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00577484
            Ensembl:ENSGALT00000001714 OMA:NSGYLRC Uniprot:E1BVD7
        Length = 146

 Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query:     4 LKPPPKDGVTKSNPSKRHRERLNAELDTLANLLP--FEQNIL-SKLDRLSILRLSVSYLR 60
             L+P  K+ + K    K  R+R+N+ ++ L  LL   F+++   SKL++  +L ++VSYL+
Sbjct:     5 LQPKEKNKLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPNSKLEKADVLEVAVSYLK 64

Query:    61 TKSYFQE 67
              +S  QE
Sbjct:    65 QQSQLQE 71


>UNIPROTKB|F1P0F5 [details] [associations]
            symbol:F1P0F5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00819827
            Ensembl:ENSGALT00000040448 Uniprot:F1P0F5
        Length = 115

 Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query:     4 LKPPPKDGVTKSNPSKRHRERLNAELDTLANLLP--FEQNIL-SKLDRLSILRLSVSYLR 60
             L+P  K+ + K    K  R+R+N+ ++ L  LL   F+++   SKL++  +L ++VSYL+
Sbjct:    12 LQPKEKNKLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPNSKLEKADVLEVAVSYLK 71

Query:    61 TKSYFQE 67
              +S  QE
Sbjct:    72 QQSQLQE 78


>UNIPROTKB|I3LMD4 [details] [associations]
            symbol:NPAS3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0005634 GO:GO:0005737 GO:GO:0007626 GO:GO:0035176
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042711 EMBL:AEMK01194093
            EMBL:CT737373 EMBL:CT954268 EMBL:CU466420 EMBL:FP102544
            Ensembl:ENSSSCT00000022418 GeneTree:ENSGT00700000104726 OMA:MGRASTA
            Uniprot:I3LMD4
        Length = 205

 Score = 94 (38.1 bits), Expect = 0.00019, P = 0.00019
 Identities = 22/52 (42%), Positives = 32/52 (61%)

Query:    14 KSNPSKRHRE-RLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             KS  + R R  + N E   LA LLP    I S+LD+ SI+RL++SYL+ + +
Sbjct:    91 KSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDF 142


>UNIPROTKB|F1S6X1 [details] [associations]
            symbol:LOC100738978 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
            PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
            GO:GO:0004871 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
            Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU914667
            Ensembl:ENSSSCT00000014635 OMA:KKXILNG Uniprot:F1S6X1
        Length = 273

 Score = 96 (38.9 bits), Expect = 0.00021, P = 0.00021
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>UNIPROTKB|E9PNQ7 [details] [associations]
            symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
            species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR011598 SMART:SM00353
            SUPFAM:SSF47459 EMBL:AC007193 HGNC:HGNC:15825 IPI:IPI00982249
            ProteinModelPortal:E9PNQ7 SMR:E9PNQ7 Ensembl:ENST00000533789
            ArrayExpress:E9PNQ7 Bgee:E9PNQ7 Uniprot:E9PNQ7
        Length = 81

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query:    14 KSNPSKRHRERLNAE-LDTLANLLPFEQNILSKLDRLSILRLSVSYLR 60
             KS  + R R     E L  LA+ LPF + + + LD+ SI+RL++SYLR
Sbjct:    18 KSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTISYLR 65


>ZFIN|ZDB-GENE-020829-1 [details] [associations]
            symbol:sim1a "single-minded homolog 1a (Drosophila)"
            species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007165
            "signal transduction" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0071542 "dopaminergic neuron differentiation" evidence=IGI;IMP]
            [GO:0030154 "cell differentiation" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
            system development" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0021979 "hypothalamus
            cell differentiation" evidence=IMP] [GO:0021536 "diencephalon
            development" evidence=IMP] InterPro:IPR000014 InterPro:IPR010578
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-020829-1
            GO:GO:0005634 GO:GO:0003677 GO:GO:0071542 GO:GO:0003700
            GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
            Gene3D:4.10.280.10 HSSP:Q99814 eggNOG:NOG310284 GO:GO:0021979
            EMBL:AY028626 IPI:IPI00494277 RefSeq:NP_835740.1 UniGene:Dr.25265
            ProteinModelPortal:Q98SJ5 STRING:Q98SJ5 GeneID:260351
            KEGG:dre:260351 CTD:260351 HOVERGEN:HBG003936 KO:K09100
            OrthoDB:EOG4QC14V NextBio:20804722 ArrayExpress:Q98SJ5
            Uniprot:Q98SJ5
        Length = 745

 Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             N  +  RE+ N+E   LA LLP    I S+ D+ SI+RL+ SYL+ +  F E
Sbjct:     7 NAGRTRREKENSEFYELAKLLPLPSAITSQSDKASIIRLTTSYLKMRIVFPE 58


>UNIPROTKB|E1BW65 [details] [associations]
            symbol:LOC419390 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00685083
            Ensembl:ENSGALT00000035200 ArrayExpress:E1BW65 Uniprot:E1BW65
        Length = 159

 Score = 89 (36.4 bits), Expect = 0.00031, P = 0.00031
 Identities = 23/66 (34%), Positives = 40/66 (60%)

Query:     4 LKPPPKDGVTKSNPSKRHRERLNAELDTLANLLP--FEQNIL-SKLDRLSILRLSVSYLR 60
             L P  K+ + K    K  R+R+N+ ++ L  LL   F+++   SKL++  IL ++VSYL+
Sbjct:    14 LTPKEKNKLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPNSKLEKADILEMAVSYLK 73

Query:    61 TKSYFQ 66
              +S+ Q
Sbjct:    74 QQSHLQ 79


>UNIPROTKB|E1BVE8 [details] [associations]
            symbol:LOC419390 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00597628
            RefSeq:XP_417552.2 UniGene:Gga.9574 PRIDE:E1BVE8
            Ensembl:ENSGALT00000001708 GeneID:419390 KEGG:gga:419390
            OMA:QEAFHFL NextBio:20822452 ArrayExpress:E1BVE8 Uniprot:E1BVE8
        Length = 161

 Score = 89 (36.4 bits), Expect = 0.00033, P = 0.00033
 Identities = 23/66 (34%), Positives = 40/66 (60%)

Query:     4 LKPPPKDGVTKSNPSKRHRERLNAELDTLANLLP--FEQNIL-SKLDRLSILRLSVSYLR 60
             L P  K+ + K    K  R+R+N+ ++ L  LL   F+++   SKL++  IL ++VSYL+
Sbjct:    14 LTPKEKNKLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPNSKLEKADILEMAVSYLK 73

Query:    61 TKSYFQ 66
              +S+ Q
Sbjct:    74 QQSHLQ 79


>UNIPROTKB|F1RM22 [details] [associations]
            symbol:HIF3A "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001666
            "response to hypoxia" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0005667 "transcription
            factor complex" evidence=IEA] [GO:0004871 "signal transducer
            activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005886
            GO:GO:0005737 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
            GO:GO:0005667 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
            InterPro:IPR021537 Pfam:PF11413 GeneTree:ENSGT00650000093281
            OMA:APILDGT EMBL:FP565329 Ensembl:ENSSSCT00000003440 Uniprot:F1RM22
        Length = 670

 Score = 99 (39.9 bits), Expect = 0.00038, P = 0.00038
 Identities = 21/47 (44%), Positives = 30/47 (63%)

Query:    14 KSNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLR 60
             KS  + R R     EL  LA+ LPF + + + LD+ SI+RL++SYLR
Sbjct:    18 KSRDAARSRRSQETELYQLAHTLPFARGVSAHLDKASIMRLTISYLR 64


>ZFIN|ZDB-GENE-041210-5 [details] [associations]
            symbol:sim1b "single-minded homolog 1b (Drosophila)"
            species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
            "signal transducer activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
            Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            ZFIN:ZDB-GENE-041210-5 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
            SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 eggNOG:NOG310284
            HOGENOM:HOG000236298 EMBL:BX649468 OrthoDB:EOG4QC14V EMBL:FJ654702
            IPI:IPI00929984 RefSeq:NP_001153057.1 UniGene:Dr.155154
            Ensembl:ENSDART00000023483 GeneID:566656 KEGG:dre:566656 CTD:566656
            NextBio:20888303 Uniprot:C1JIE2
        Length = 586

 Score = 98 (39.6 bits), Expect = 0.00041, P = 0.00041
 Identities = 23/55 (41%), Positives = 34/55 (61%)

Query:    14 KSNPSKR-HRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQE 67
             KS  + R  RE+ N+E   LA +LP    I S+LD+ SI+RL+ SYL+ +  F +
Sbjct:     4 KSKTAARTRREKENSEFYELAKMLPLPSAITSQLDKASIIRLTSSYLKMRLVFPQ 58


>UNIPROTKB|J9P6G5 [details] [associations]
            symbol:NPAS1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0004871 "signal transducer
            activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
            TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
            EMBL:AAEX03000848 EMBL:AAEX03000849 EMBL:AAEX03000850
            EMBL:AAEX03000851 RefSeq:XP_541539.2 Ensembl:ENSCAFT00000047187
            GeneID:484424 KEGG:cfa:484424 Uniprot:J9P6G5
        Length = 594

 Score = 98 (39.6 bits), Expect = 0.00042, P = 0.00042
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             N ++  R + N E   LA LLP    I S+LD+ SI+RLSV+YLR + +
Sbjct:    53 NAARSRRGKKNLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRF 101


>UNIPROTKB|E1B815 [details] [associations]
            symbol:NPAS1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
            GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
            SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
            EMBL:DAAA02047406 IPI:IPI00717601 RefSeq:NP_001179586.1
            UniGene:Bt.109442 Ensembl:ENSBTAT00000020691 GeneID:528272
            KEGG:bta:528272 NextBio:20874783 Uniprot:E1B815
        Length = 587

 Score = 97 (39.2 bits), Expect = 0.00053, P = 0.00053
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             N ++  R + N E   LA LLP    I S+LD+ SI+RLSV+YLR + +
Sbjct:    45 NAARSRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRF 93


>UNIPROTKB|Q99742 [details] [associations]
            symbol:NPAS1 "Neuronal PAS domain-containing protein 1"
            species:9606 "Homo sapiens" [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=TAS] [GO:0007417 "central
            nervous system development" evidence=TAS] InterPro:IPR000014
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610
            GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
            GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
            EMBL:U77968 EMBL:AB054002 EMBL:BC039016 EMBL:U51628 IPI:IPI00293815
            RefSeq:NP_002508.2 UniGene:Hs.79564 ProteinModelPortal:Q99742
            SMR:Q99742 STRING:Q99742 DMDM:59803108 PRIDE:Q99742
            Ensembl:ENST00000449844 GeneID:4861 KEGG:hsa:4861 UCSC:uc002pfw.3
            CTD:4861 GeneCards:GC19P047523 HGNC:HGNC:7894 MIM:603346
            neXtProt:NX_Q99742 PharmGKB:PA31695 eggNOG:NOG287666
            HOGENOM:HOG000236298 HOVERGEN:HBG052655 InParanoid:Q99742 KO:K09098
            OMA:VYPHLQR OrthoDB:EOG4M0F1J PhylomeDB:Q99742 GenomeRNAi:4861
            NextBio:18726 ArrayExpress:Q99742 Bgee:Q99742 CleanEx:HS_NPAS1
            Genevestigator:Q99742 GermOnline:ENSG00000130751 Uniprot:Q99742
        Length = 590

 Score = 97 (39.2 bits), Expect = 0.00053, P = 0.00053
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             N ++  R + N E   LA LLP    I S+LD+ SI+RLSV+YLR + +
Sbjct:    52 NAARSRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRF 100


>UNIPROTKB|F1RM06 [details] [associations]
            symbol:NPAS1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
            GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
            SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104038 OMA:VYPHLQR EMBL:FP103026
            Ensembl:ENSSSCT00000003447 Uniprot:F1RM06
        Length = 598

 Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             N ++  R + N E   LA LLP    I S+LD+ SI+RLSV+YLR + +
Sbjct:    52 NAARSRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRF 100


>UNIPROTKB|F8W6J9 [details] [associations]
            symbol:ARNTL "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:9606 "Homo sapiens"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
            PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
            InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
            TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884
            EMBL:AC022878 IPI:IPI00217732 HGNC:HGNC:701
            ProteinModelPortal:F8W6J9 SMR:F8W6J9 Ensembl:ENST00000389708
            ArrayExpress:F8W6J9 Bgee:F8W6J9 Uniprot:F8W6J9
        Length = 526

 Score = 96 (38.9 bits), Expect = 0.00059, P = 0.00059
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>UNIPROTKB|Q5R4T2 [details] [associations]
            symbol:ARNTL "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:9601 "Pongo abelii"
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
            evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
            PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
            GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
            Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 CTD:406
            HOVERGEN:HBG107503 KO:K02296 EMBL:CR861161 RefSeq:NP_001126900.1
            UniGene:Pab.3880 ProteinModelPortal:Q5R4T2 GeneID:100173916
            KEGG:pon:100173916 Uniprot:Q5R4T2
        Length = 625

 Score = 96 (38.9 bits), Expect = 0.00073, P = 0.00073
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>UNIPROTKB|E1BLF5 [details] [associations]
            symbol:ARNTL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0043425 "bHLH transcription factor binding" evidence=IEA]
            [GO:0042176 "regulation of protein catabolic process" evidence=IEA]
            [GO:0032922 "circadian regulation of gene expression" evidence=IEA]
            [GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
            [GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
            factor complex" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0000982 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0000060
            "protein import into nucleus, translocation" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
            transducer activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
            GO:GO:0007623 GO:GO:0005667 GO:GO:0000060 GO:GO:0004871
            GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190
            GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0042176 CTD:406 KO:K02296 OMA:EKINTNC EMBL:DAAA02040648
            IPI:IPI00712443 RefSeq:NP_001178099.1 UniGene:Bt.39079 PRIDE:E1BLF5
            Ensembl:ENSBTAT00000017323 GeneID:530705 KEGG:bta:530705
            NextBio:20875311 Uniprot:E1BLF5
        Length = 626

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>UNIPROTKB|O00327 [details] [associations]
            symbol:ARNTL "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:9606 "Homo sapiens"
            [GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
            translocation" evidence=IEA] [GO:0001190 "RNA polymerase II
            transcription factor binding transcription factor activity involved
            in positive regulation of transcription" evidence=IEA] [GO:0016604
            "nuclear body" evidence=IEA] [GO:0042176 "regulation of protein
            catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
            factor binding" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0007623 "circadian
            rhythm" evidence=TAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
            gene expression" evidence=ISS] [GO:0003677 "DNA binding"
            evidence=IGI] [GO:0005667 "transcription factor complex"
            evidence=IPI] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0017162
            "aryl hydrocarbon receptor binding" evidence=IPI] [GO:0051879
            "Hsp90 protein binding" evidence=IDA] [GO:0000982 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR000014
            InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
            EMBL:CH471064 GO:GO:0003677 GO:GO:0045944 GO:GO:0005667
            GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
            SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
            HOGENOM:HOG000234379 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0051879 GO:GO:0042176 Pathway_Interaction_DB:circadianpathway
            Reactome:REACT_24941 CTD:406 HOVERGEN:HBG107503 KO:K02296
            OMA:EKINTNC OrthoDB:EOG4NS3B2 EMBL:D89722 EMBL:AB000812
            EMBL:AB000813 EMBL:AB000814 EMBL:AB000815 EMBL:AB000816 EMBL:U51627
            EMBL:U60415 EMBL:AF044288 EMBL:AK095749 EMBL:AK291510 EMBL:EF015894
            EMBL:AC016884 EMBL:AC022878 EMBL:BC016674 EMBL:BC031214
            EMBL:BC041129 IPI:IPI00217732 IPI:IPI00217734 IPI:IPI00217735
            IPI:IPI00217736 IPI:IPI00412162 IPI:IPI00413132 IPI:IPI00783543
            IPI:IPI00879656 IPI:IPI00910251 PIR:JC5405 PIR:JC5407 PIR:PC4288
            PIR:PC4289 RefSeq:NP_001025443.1 RefSeq:NP_001025444.1
            RefSeq:NP_001169.3 UniGene:Hs.65734 PDB:4H10 PDBsum:4H10
            ProteinModelPortal:O00327 SMR:O00327 IntAct:O00327 STRING:O00327
            PhosphoSite:O00327 PaxDb:O00327 PRIDE:O00327 DNASU:406
            Ensembl:ENST00000361003 Ensembl:ENST00000389707
            Ensembl:ENST00000396441 Ensembl:ENST00000401424
            Ensembl:ENST00000403290 Ensembl:ENST00000403482
            Ensembl:ENST00000403510 GeneID:406 KEGG:hsa:406 UCSC:uc001mkp.3
            UCSC:uc001mkr.3 UCSC:uc001mks.3 UCSC:uc001mkx.3 UCSC:uc009ygm.1
            GeneCards:GC11P013299 HGNC:HGNC:701 MIM:602550 neXtProt:NX_O00327
            PharmGKB:PA24996 InParanoid:O00327 GenomeRNAi:406 NextBio:1701
            ArrayExpress:O00327 Bgee:O00327 Genevestigator:O00327
            GermOnline:ENSG00000133794 Uniprot:O00327
        Length = 626

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>UNIPROTKB|A0MLS5 [details] [associations]
            symbol:ARNTL "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:9796 "Equus caballus"
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
            evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
            PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
            GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
            eggNOG:NOG293303 HOGENOM:HOG000234379 Gene3D:4.10.280.10
            SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296
            OrthoDB:EOG4NS3B2 EMBL:DQ988038 RefSeq:NP_001075390.1
            UniGene:Eca.2805 ProteinModelPortal:A0MLS5 STRING:A0MLS5
            GeneID:100034115 KEGG:ecb:100034115 InParanoid:A0MLS5
            Uniprot:A0MLS5
        Length = 626

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>UNIPROTKB|O88529 [details] [associations]
            symbol:ARNTL "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:10036 "Mesocricetus auratus"
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
            evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
            PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
            GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
            Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 EMBL:AF070917
            ProteinModelPortal:O88529 IntAct:O88529 Uniprot:O88529
        Length = 626

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>UNIPROTKB|Q91YA9 [details] [associations]
            symbol:Arntl "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:1026970 "Nannospalax galili"
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
            evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
            PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 EMBL:AJ318060 GO:GO:0005737
            GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0005667 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
            TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
            HOVERGEN:HBG107503 ProteinModelPortal:Q91YA9 Uniprot:Q91YA9
        Length = 626

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>RGD|62003 [details] [associations]
            symbol:Arntl "aryl hydrocarbon receptor nuclear translocator-like"
           species:10116 "Rattus norvegicus" [GO:0000060 "protein import into
           nucleus, translocation" evidence=ISO] [GO:0000982 "RNA polymerase II
           core promoter proximal region sequence-specific DNA binding
           transcription factor activity" evidence=ISO] [GO:0001190 "RNA
           polymerase II transcription factor binding transcription factor
           activity involved in positive regulation of transcription"
           evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
           [GO:0003700 "sequence-specific DNA binding transcription factor
           activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
           evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
           "transcription factor complex" evidence=IEA;ISO;ISS] [GO:0005737
           "cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
           evidence=IEA] [GO:0006355 "regulation of transcription,
           DNA-dependent" evidence=ISO;ISS] [GO:0007623 "circadian rhythm"
           evidence=IEP;ISO] [GO:0016604 "nuclear body" evidence=ISO]
           [GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
           [GO:0032922 "circadian regulation of gene expression"
           evidence=ISO;ISS] [GO:0042176 "regulation of protein catabolic
           process" evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
           evidence=NAS] [GO:0043425 "bHLH transcription factor binding"
           evidence=ISO] [GO:0045944 "positive regulation of transcription from
           RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
           heterodimerization activity" evidence=ISO] [GO:0046983 "protein
           dimerization activity" evidence=IEA] [GO:0051879 "Hsp90 protein
           binding" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
           InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
           Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
           PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
           SMART:SM00353 InterPro:IPR001610 RGD:62003 GO:GO:0005737
           GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
           GO:GO:0042752 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
           SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
           GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379 Gene3D:4.10.280.10
           SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296 EMBL:AB012600
           EMBL:AF015953 EMBL:AF317669 EMBL:BC099833 IPI:IPI00339130
           IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2 UniGene:Rn.14532
           ProteinModelPortal:Q9EPW1 STRING:Q9EPW1 PhosphoSite:Q9EPW1
           Ensembl:ENSRNOT00000019645 GeneID:29657 KEGG:rno:29657
           UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
           Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
        Length = 626

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>UNIPROTKB|Q9EPW1 [details] [associations]
            symbol:Arntl "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:10116 "Rattus norvegicus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:62003
            GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0042752 GO:GO:0005667 GO:GO:0004871
            GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
            GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
            Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503
            KO:K02296 EMBL:AB012600 EMBL:AF015953 EMBL:AF317669 EMBL:BC099833
            IPI:IPI00339130 IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2
            UniGene:Rn.14532 ProteinModelPortal:Q9EPW1 STRING:Q9EPW1
            PhosphoSite:Q9EPW1 Ensembl:ENSRNOT00000019645 GeneID:29657
            KEGG:rno:29657 UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
            Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
        Length = 626

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>ZFIN|ZDB-GENE-000509-1 [details] [associations]
            symbol:arntl1a "aryl hydrocarbon receptor nuclear
            translocator-like 1a" species:7955 "Danio rerio" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0009648 "photoperiodism" evidence=IEP]
            [GO:0007623 "circadian rhythm" evidence=IGI] [GO:0009416 "response
            to light stimulus" evidence=IGI] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-1
            GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0003677
            GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
            GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
            GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
            HSSP:P36956 HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC GO:GO:0009648
            EMBL:CR759966 EMBL:AF144689 EMBL:AF144690 IPI:IPI00490446
            RefSeq:NP_571652.1 UniGene:Dr.75458 DIP:DIP-46453N STRING:Q9I879
            Ensembl:ENSDART00000023959 Ensembl:ENSDART00000148660 GeneID:58098
            KEGG:dre:58098 CTD:58098 InParanoid:Q9I879 NextBio:20892352
            Uniprot:Q9I879
        Length = 626

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    82 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 128


>UNIPROTKB|E2R130 [details] [associations]
            symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
            SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
            Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03012928
            Ensembl:ENSCAFT00000012969 Uniprot:E2R130
        Length = 627

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124


>MGI|MGI:1096381 [details] [associations]
            symbol:Arntl "aryl hydrocarbon receptor nuclear
            translocator-like" species:10090 "Mus musculus" [GO:0000060
            "protein import into nucleus, translocation" evidence=IDA]
            [GO:0000982 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IC]
            [GO:0001190 "RNA polymerase II transcription factor binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=IDA] [GO:0003677 "DNA binding"
            evidence=ISO;IPI] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISA;IDA] [GO:0004871
            "signal transducer activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005667 "transcription factor complex" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISA;IDA] [GO:0007165 "signal
            transduction" evidence=IEA] [GO:0007623 "circadian rhythm"
            evidence=IDA;IMP] [GO:0008134 "transcription factor binding"
            evidence=ISA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0017162
            "aryl hydrocarbon receptor binding" evidence=ISO] [GO:0032922
            "circadian regulation of gene expression" evidence=IDA] [GO:0042176
            "regulation of protein catabolic process" evidence=IDA] [GO:0043425
            "bHLH transcription factor binding" evidence=IPI] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IGI;IC;ISO;IDA] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
            InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
            PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            MGI:MGI:1096381 GO:GO:0005829 GO:GO:0003677 GO:GO:0005667
            GO:GO:0001077 GO:GO:0000060 GO:GO:0004871 GO:GO:0032922
            SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
            GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0042176
            GO:GO:0016604 Reactome:REACT_109335 Reactome:REACT_24972 CTD:406
            HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC OrthoDB:EOG4NS3B2
            EMBL:AB012601 EMBL:AB015203 EMBL:AB012602 EMBL:AB014494
            EMBL:BC025973 EMBL:BC011080 IPI:IPI00403502 IPI:IPI00462286
            IPI:IPI00474434 IPI:IPI00474567 IPI:IPI00875930 PIR:JE0270
            RefSeq:NP_001229977.1 RefSeq:NP_031515.1 UniGene:Mm.440371 PDB:4F3L
            PDBsum:4F3L ProteinModelPortal:Q9WTL8 SMR:Q9WTL8 DIP:DIP-43977N
            IntAct:Q9WTL8 MINT:MINT-1657344 STRING:Q9WTL8 PhosphoSite:Q9WTL8
            PaxDb:Q9WTL8 PRIDE:Q9WTL8 Ensembl:ENSMUST00000047321 GeneID:11865
            KEGG:mmu:11865 UCSC:uc009jhf.1 UCSC:uc009jhi.1 UCSC:uc009jhj.1
            InParanoid:Q9WTL8 NextBio:279875 Bgee:Q9WTL8 Genevestigator:Q9WTL8
            GermOnline:ENSMUSG00000055116 Uniprot:Q9WTL8
        Length = 632

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    85 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 131


>UNIPROTKB|Q9I8T7 [details] [associations]
            symbol:ARNTL "Aryl hydrocarbon receptor nuclear
            translocator-like protein 1" species:9031 "Gallus gallus"
            [GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
            translocation" evidence=IEA] [GO:0000982 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001190 "RNA
            polymerase II transcription factor binding transcription factor
            activity involved in positive regulation of transcription"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
            body" evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
            evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
            evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
            evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
            PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0005667
            GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
            TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
            GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
            Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 GO:GO:0042176
            EMBL:AF205219 EMBL:AF246957 IPI:IPI00577807 RefSeq:NP_001001463.1
            UniGene:Gga.1329 ProteinModelPortal:Q9I8T7 STRING:Q9I8T7
            Ensembl:ENSGALT00000032732 GeneID:374115 KEGG:gga:374115 CTD:406
            HOVERGEN:HBG107503 InParanoid:Q9I8T7 KO:K02296 OMA:EKINTNC
            OrthoDB:EOG4NS3B2 NextBio:20813631 ArrayExpress:Q9I8T7
            Uniprot:Q9I8T7
        Length = 633

 Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:    85 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 131


>ZFIN|ZDB-GENE-030408-1 [details] [associations]
            symbol:arntl1b "aryl hydrocarbon receptor nuclear
            translocator-like 1b" species:7955 "Danio rerio" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA;IPI] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
            [GO:0009648 "photoperiodism" evidence=IEP] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
            InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-030408-1
            GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
            GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0009648 EMBL:CR318647 IPI:IPI00859492
            Ensembl:ENSDART00000098259 OMA:REKINTH Uniprot:E7F4H0
        Length = 646

 Score = 96 (38.9 bits), Expect = 0.00077, P = 0.00076
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:   104 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 150


>UNIPROTKB|J9NTT7 [details] [associations]
            symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
            InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
            PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
            SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
            Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:EKINTNC EMBL:AAEX03012928
            Ensembl:ENSCAFT00000044767 Uniprot:J9NTT7
        Length = 659

 Score = 96 (38.9 bits), Expect = 0.00078, P = 0.00078
 Identities = 18/47 (38%), Positives = 34/47 (72%)

Query:    15 SNPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRT 61
             S   KR R+++N+ +D LA+L+P    +  KLD+L++LR++V +++T
Sbjct:   110 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 156


>MGI|MGI:109205 [details] [associations]
            symbol:Npas1 "neuronal PAS domain protein 1" species:10090
            "Mus musculus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007165 "signal transduction" evidence=IEA] [GO:0007610
            "behavior" evidence=IMP] [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
            Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
            SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:109205
            GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
            GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
            SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 CTD:4861
            eggNOG:NOG287666 HOGENOM:HOG000236298 HOVERGEN:HBG052655 KO:K09098
            OMA:VYPHLQR OrthoDB:EOG4M0F1J EMBL:U77967 IPI:IPI00125487
            RefSeq:NP_032744.1 UniGene:Mm.145821 ProteinModelPortal:P97459
            SMR:P97459 STRING:P97459 PRIDE:P97459 Ensembl:ENSMUST00000002053
            GeneID:18142 KEGG:mmu:18142 InParanoid:P97459 NextBio:293392
            Bgee:P97459 CleanEx:MM_NPAS1 Genevestigator:P97459
            GermOnline:ENSMUSG00000001988 Uniprot:P97459
        Length = 594

 Score = 95 (38.5 bits), Expect = 0.00088, P = 0.00088
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             N ++  R + N E   LA LLP    I S+LD+ SI+RLSV+YLR + +
Sbjct:    52 NAARWRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRF 100


>RGD|1310040 [details] [associations]
            symbol:Npas1 "neuronal PAS domain protein 1" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0046983
            "protein dimerization activity" evidence=IEA] InterPro:IPR000014
            InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
            Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
            PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
            RGD:1310040 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
            GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
            SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:CH473979 CTD:4861
            KO:K09098 OMA:VYPHLQR OrthoDB:EOG4M0F1J IPI:IPI00373182
            RefSeq:NP_001100949.1 UniGene:Rn.211375 Ensembl:ENSRNOT00000020855
            GeneID:308387 KEGG:rno:308387 UCSC:RGD:1310040 NextBio:658741
            Uniprot:D3ZJ66
        Length = 595

 Score = 95 (38.5 bits), Expect = 0.00088, P = 0.00088
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query:    16 NPSKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSY 64
             N ++  R + N E   LA LLP    I S+LD+ SI+RLSV+YLR + +
Sbjct:    52 NAARWRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRF 100


>FB|FBgn0039411 [details] [associations]
            symbol:dys "dysfusion" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS;IDA;IPI] [GO:0007424 "open tracheal system
            development" evidence=NAS;IMP] [GO:0035147 "branch fusion, open
            tracheal system" evidence=IEP;IMP] [GO:0046982 "protein
            heterodimerization activity" evidence=TAS;IPI] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0007165 "signal
            transduction" evidence=IEA] [GO:0007427 "epithelial cell migration,
            open tracheal system" evidence=IMP] [GO:0043234 "protein complex"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
            InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112 SMART:SM00091
            SMART:SM00353 InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634
            GO:GO:0043234 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 GO:GO:0004871 GO:GO:0046982 SMART:SM00086
            TIGRFAMs:TIGR00229 GO:GO:0007427 GO:GO:0035147 CTD:42327
            GeneTree:ENSGT00530000064165 UniGene:Dm.18571 GeneID:43174
            KEGG:dme:Dmel_CG32474 FlyBase:FBgn0039411 GenomeRNAi:43174
            NextBio:832549 RefSeq:NP_733137.3 ProteinModelPortal:Q9VBH3
            SMR:Q9VBH3 STRING:Q9VBH3 EnsemblMetazoa:FBtr0300618 UCSC:CG32474-RA
            InParanoid:Q9VBH3 OMA:VIYATIV PhylomeDB:Q9VBH3 ArrayExpress:Q9VBH3
            Bgee:Q9VBH3 Uniprot:Q9VBH3
        Length = 920

 Score = 97 (39.2 bits), Expect = 0.00092, P = 0.00092
 Identities = 19/51 (37%), Positives = 32/51 (62%)

Query:    18 SKRHRERLNAELDTLANLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQEM 68
             SK  R+ +NAE+  L +LLP  Q+   +L +L ++ L   Y+R  +YFQ++
Sbjct:   161 SKMRRDLINAEIANLRDLLPLPQSTRQRLSQLQLMALVCVYVRKANYFQQV 211


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.362    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       68        68   0.00091  102 3  11 22  0.45    28
                                                     29  0.38    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  84
  No. of states in DFA:  382 (41 KB)
  Total size of DFA:  66 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:10
  No. of threads or processors used:  24
  Search cpu time:  9.99u 0.07s 10.06t   Elapsed:  00:00:11
  Total cpu time:  10.00u 0.07s 10.07t   Elapsed:  00:00:21
  Start:  Thu Aug 15 13:07:42 2013   End:  Thu Aug 15 13:08:03 2013

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