Query psy827
Match_columns 2693
No_of_seqs 405 out of 626
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 23:04:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy827.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/827hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3533|consensus 100.0 0E+00 0E+00 5365.9 173.7 2368 1-2627 1-2706(2706)
2 KOG2243|consensus 100.0 2E-155 3E-160 1415.6 103.7 2230 1-2578 1-5010(5019)
3 PF08709 Ins145_P3_rec: Inosit 100.0 1.8E-43 3.9E-48 415.2 19.2 211 7-232 2-213 (214)
4 PF01365 RYDR_ITPR: RIH domain 99.9 2.2E-28 4.7E-33 288.3 7.2 197 460-667 2-203 (207)
5 PF08454 RIH_assoc: RyR and IP 99.9 1.5E-26 3.4E-31 241.5 8.2 103 1901-2013 5-108 (109)
6 KOG3533|consensus 99.9 3.7E-23 8E-28 263.1 9.4 171 1040-1285 1338-1523(2706)
7 PF01365 RYDR_ITPR: RIH domain 99.9 2.4E-22 5.1E-27 237.2 7.7 159 1237-1395 3-185 (207)
8 PF02815 MIR: MIR domain; Int 99.7 1.1E-17 2.4E-22 195.1 12.5 157 236-397 1-159 (190)
9 KOG3359|consensus 99.5 1.6E-14 3.4E-19 187.6 12.6 146 176-322 312-468 (723)
10 COG1928 PMT1 Dolichyl-phosphat 99.5 7.8E-14 1.7E-18 181.2 11.2 144 177-322 300-449 (699)
11 KOG3358|consensus 99.4 8E-13 1.7E-17 142.6 8.8 137 177-322 25-165 (211)
12 KOG3358|consensus 98.7 2.7E-08 5.8E-13 108.3 7.6 142 235-395 23-166 (211)
13 PF02815 MIR: MIR domain; Int 98.6 7.5E-08 1.6E-12 112.9 8.9 128 194-323 1-157 (190)
14 KOG3359|consensus 97.8 0.00027 5.7E-09 94.2 16.1 170 115-291 312-499 (723)
15 PF08709 Ins145_P3_rec: Inosit 97.5 0.00086 1.9E-08 80.4 13.6 161 115-291 4-208 (214)
16 PLN03223 Polycystin cation cha 97.2 0.0014 3.1E-08 90.6 11.5 94 2403-2497 1304-1429(1634)
17 smart00472 MIR Domain in ryano 97.0 0.00091 2E-08 63.0 5.3 55 114-168 1-57 (57)
18 COG1928 PMT1 Dolichyl-phosphat 96.8 0.0083 1.8E-07 80.5 12.7 171 115-291 299-479 (699)
19 smart00472 MIR Domain in ryano 96.7 0.002 4.4E-08 60.6 4.9 53 236-290 2-56 (57)
20 KOG3599|consensus 96.0 0.093 2E-06 73.3 16.5 121 2377-2499 542-688 (798)
21 PF08016 PKD_channel: Polycyst 95.5 0.067 1.5E-06 71.1 11.7 92 2400-2492 306-424 (425)
22 PF00520 Ion_trans: Ion transp 92.6 0.74 1.6E-05 53.6 11.2 88 2399-2486 67-200 (200)
23 KOG2243|consensus 91.4 0.49 1.1E-05 64.5 8.2 132 1261-1392 489-638 (5019)
24 PF04601 DUF569: Protein of un 91.1 1 2.2E-05 50.4 9.2 67 237-323 3-69 (142)
25 KOG2302|consensus 88.1 1.9 4.1E-05 58.9 9.7 95 2404-2498 1235-1396(1956)
26 KOG2301|consensus 87.8 0.92 2E-05 67.6 7.5 97 2402-2498 1260-1408(1592)
27 TIGR00870 trp transient-recept 79.8 6.3 0.00014 56.5 10.4 96 2402-2498 480-623 (743)
28 KOG2301|consensus 74.0 10 0.00023 57.1 9.9 91 2402-2492 535-664 (1592)
29 KOG3614|consensus 67.9 95 0.0021 45.9 16.4 126 2352-2500 904-1052(1381)
30 PF04601 DUF569: Protein of un 65.5 38 0.00082 38.4 9.7 105 181-321 7-116 (142)
31 PF05529 Bap31: B-cell recepto 45.7 5E+02 0.011 31.0 15.5 36 2583-2618 154-189 (192)
32 PF09759 Atx10homo_assoc: Spin 45.1 49 0.0011 35.6 6.1 65 1239-1319 6-70 (102)
33 PF00167 FGF: Fibroblast growt 38.6 1.5E+02 0.0032 32.7 9.0 58 244-323 3-60 (122)
34 PF13965 SID-1_RNA_chan: dsRNA 36.9 9E+02 0.02 34.0 17.7 71 2383-2454 434-508 (570)
35 PRK10537 voltage-gated potassi 35.9 2.2E+02 0.0048 38.0 11.4 23 2433-2455 140-162 (393)
36 PF14200 RicinB_lectin_2: Rici 34.1 1.3E+02 0.0029 31.8 7.6 79 283-395 2-80 (105)
37 KOG2568|consensus 30.6 1.6E+03 0.035 31.0 18.5 14 2214-2227 218-231 (518)
38 KOG3713|consensus 30.0 1.7E+02 0.0037 39.3 8.7 95 2410-2506 326-446 (477)
39 PHA01750 hypothetical protein 26.9 1.1E+02 0.0024 29.8 4.6 36 2585-2620 37-72 (75)
40 PF14200 RicinB_lectin_2: Rici 26.0 2.5E+02 0.0053 29.9 7.9 78 220-323 3-80 (105)
41 PF06459 RR_TM4-6: Ryanodine R 25.7 54 0.0012 41.2 3.2 34 2212-2246 161-194 (274)
42 PF08865 DUF1830: Domain of un 23.9 45 0.00097 33.2 1.6 40 2136-2175 2-45 (68)
43 PF08454 RIH_assoc: RyR and IP 23.5 2.1E+02 0.0045 31.3 6.6 78 1233-1319 7-94 (109)
No 1
>KOG3533|consensus
Probab=100.00 E-value=0 Score=5365.94 Aligned_cols=2368 Identities=63% Similarity=0.961 Sum_probs=2172.3
Q ss_pred Cccc-cCCCCccccCCEEEEEecCccceEEEecCCCCCCeEEecCCCCCCCCCCccccceEEEecCcccHHHHHHHHHHH
Q psy827 1 MNDM-IGSASFLHLGDIVSLFAEGNVCGFLSTLGLVDDRTVVCPDAGDLANAPKKFRDCLFKICPMNRYSAQKQFWKAAK 79 (2693)
Q Consensus 1 ~~~~-~~~~~~L~~GDiVsL~~e~~~~gflst~G~~~~~~~v~~~~g~~~n~p~~frdclFkI~P~~~y~Aqk~~~k~~k 79 (2693)
|+|. .++++|||+|||||||+||+++|||||+|+|||||+|+|.+|++.|||+||||||||||||+||+|||||||++|
T Consensus 1 m~~~i~g~ssfLhiGDIvSLYaEgSvnGFlSTLGLVDDRcvV~peaGdl~nPPKKFRDCLfKvCPmNRYsAQKq~Wka~k 80 (2706)
T KOG3533|consen 1 MANSIHGMSSFLHIGDIVSLYAEGSVNGFLSTLGLVDDRCVVEPEAGDLENPPKKFRDCLFKVCPMNRYSAQKQLWKAQK 80 (2706)
T ss_pred CCcccccccccceecceeeeeecccccchhhhhcccccceeeccCCCCCCCCchHHHhhhhhhCCcchHHHHHHHHHHhh
Confidence 5553 457999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hccCC--cchHHHHHHHHHHHHHhhhhcHHHHHHhcCcEeeeccEEEEeecCCCceEEEcCccchhhccCceEEEeecCC
Q psy827 80 QSASS--TTDAVLLKRLHHAAEIEKKQNESENKKLLGMVVQYGSVVQLLHLKSNKFLTVNKRLPALLEKNAMRVYLDANG 157 (2693)
Q Consensus 80 ~~~~~--~~~~~~l~~Lq~~ae~E~~~N~~e~~k~~G~~V~YG~~IQL~Hv~S~kyLt~~~~~~a~~Ek~a~~V~L~~~~ 157 (2693)
+.+.+ .+|+++|++|||||+.|++||+.|++|++|+.|+||++|||+|++|||||||++++||..|||||||+||..|
T Consensus 81 ~~q~~~~~td~~Ll~kL~hAA~~E~kqNesEnkKllG~viqYgsvvQLLH~KSNKYlTVnKrlPallEkNAMrV~LDaaG 160 (2706)
T KOG3533|consen 81 RFQTGDSMTDDDLLNKLKHAADKERKQNESENKKLLGNVIQYGSVVQLLHVKSNKYLTVNKRLPALLEKNAMRVYLDAAG 160 (2706)
T ss_pred hccCCCccccHHHHHHHHHHHHHHHhhcchHHHHHhhhHhhhhhHHhhhhhccCceEEEeccChhhHhhcceEEEeeccC
Confidence 76654 4999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEecCcccccCCCeEeeCCEEEEEEccCCCceeeeeccccCCCCCCceeEEeecCCceeEEEEcccccccccCc
Q psy827 158 NEGSWFYILPFYKLRSTGDNVVVGDKVIMNPVNAGQQVLHVAANYELPDNPGCKEVNVVNSSTSWKVTLFMEHRENQEEI 237 (2693)
Q Consensus 158 se~s~F~I~P~~K~r~eGd~V~~gD~ViL~~v~~~~~~LH~s~~~~~p~~~~~~EVn~sd~~T~WkI~l~~~~~~~~~~~ 237 (2693)
||||||+|+|+||+|+.||+|++||+|+|.|+++|++-||+.+++++++++||.|||+.+++|+|+|.+|+.+.++.++.
T Consensus 161 NEGSWfyI~PfyKlrsiGDnVvvGdKv~L~Pvna~~Q~lHvas~~eL~DnpgckEVN~~N~nTsWki~lFm~~~en~e~~ 240 (2706)
T KOG3533|consen 161 NEGSWFYIEPFYKLRSIGDNVVVGDKVSLIPVNAGTQPLHVASSFELLDNPGCKEVNCLNCNTSWKIFLFMLFDENQENS 240 (2706)
T ss_pred CccceEEeehhHHhhccCCceEEcceEEEcccCCCCccchhhhccccCCCCCcccccccCCCCcceeeeeeeeccchhhh
Confidence 99999999999999999999999999999999999666999999999999999999999999999999999999999999
Q ss_pred cccCCEEEEEecCCCccccccccccccceeEEeeccCCCCCCCCCCCcEEEEEeecCCCCCCCCccccceeEEEccCCcc
Q psy827 238 LKGGDVVRLFHAEQEKFLTMDEYKKKQHVFLRTTGRTSATSATSSKALWEIEVVQHDPCRGGAGHWNCLFRFKHLATGHY 317 (2693)
Q Consensus 238 Lk~GDVIRLfH~E~~~~Lt~~~~~~~~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~~Gg~v~w~~~fRLKHl~TG~Y 317 (2693)
|||||||||||+|+++|||+++++++.++|+|+|++.++++++|+++||+||++++|||+||+++|++.|||||++||.|
T Consensus 241 lKgGDVVRLFHAeQekFLT~Dey~kq~hVFLRtT~RqSAtsATSSkALWEveVVqhd~cRGGag~WNslyRFKHLATg~Y 320 (2706)
T KOG3533|consen 241 LKGGDVVRLFHAEQEKFLTCDEYPKQNHVFLRTTNRQSATSATSSKALWEVEVVQHDPCRGGAGKWNSLYRFKHLATGMY 320 (2706)
T ss_pred hccCcEEEeecccccceeehhcccccceEEEeccCCcccccccccccceeEEEEecCCCCCcccchhhhhhhhhhcccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCchhhhhh--------------------------hcccccCCCceeEEEEecCCCCCCCcccccCcccccccCc
Q psy827 318 LAAEIDTDETMDQM--------------------------RSKLRDHHGGSVYHLVSVPHPNEISSLFELDPTTLTRADS 371 (2693)
Q Consensus 318 La~~~~~~~~~~~~--------------------------~~~~~~~~~~~~f~L~~~~~~~~~~s~F~L~~~~~~~~d~ 371 (2693)
|+++.+++...+.+ .++.++..+...|+|+++|+++|++++|+|||+|+.++|+
T Consensus 321 LaAE~~~d~~~~A~~~~~as~~~~~~~~~~k~~~~g~~~~n~~~~~a~eki~y~lVsvP~~~DiaslFeLDptTl~k~ds 400 (2706)
T KOG3533|consen 321 LAAEPSPDQVKDAMNGRRASLIYSKTNNPMKMYSDGPNGVNESTRTAQEKIPYVLVSVPTGNDIASLFELDPTTLMKSDS 400 (2706)
T ss_pred eecCCCccccccccccccccccccccCChHhhhcCCCCccccccccccccCceEEEecCCCcchhHhhccChHHhccCCC
Confidence 99987765432222 2245666778999999999999999999999999999999
Q ss_pred cccCCCeEEEEEcccCceEEeeccccCCCCCCcc----ccCCccccccceEEeecChhhhhhhHHHHHHHHHHHHHHHhh
Q psy827 372 LVPQSSYVRLHHLCTNTWVHSTSIPIDKDEEKPV----GCAPLKEDKEAFALIPVSPTEVRDLDFANDACKVLAANSSKL 447 (2693)
Q Consensus 372 ~V~~~SyvrIqH~~T~~WL~~~~~~id~~e~~~v----~~~~~k~d~daF~i~~v~~~Evrd~~f~~s~~~vL~~~~~~l 447 (2693)
.||++||||++|.||++|||++++|||.++++|+ |+++.|+|++||+|.+|+++||||++|+++|+++|..+++++
T Consensus 401 lVPrnSYVRLrHlcsntWVhaT~ipid~~eekpvmlkv~~~p~keDKEaFAlvpV~p~EVRDLDFANDA~kvLa~~~~kl 480 (2706)
T KOG3533|consen 401 LVPRNSYVRLRHLCSNTWVHATTIPIDSKEEKPVMLKVGCEPNKEDKEAFALVPVNPDEVRDLDFANDACKVLANFIKKL 480 (2706)
T ss_pred cCCchhhHHHHhhccCceeecccccccccccCceEEEEecccCccchhheeEeccCHHHhhcccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986 899999999999999999999999999999999999999999
Q ss_pred hcCCCChhhHHHHHHHHHHHHhhhcCcccccchhhhhhhhcCCCChHHHHHHHhhchHHHHHHHhcccccccccCCCCcc
Q psy827 448 ENGSISQNERRAVTSLLQDIVYFIAGLENEQNKSEALELSVVNPNRDRQKLLREQYILKQLFKILQAPFLEIVEGEGPFL 527 (2693)
Q Consensus 448 ~~~~i~~~~~~~v~~~L~dLi~F~~~~e~~~n~~~~L~~~~~~pnr~RQkLLREq~iL~lL~~iL~~pF~~~~~~~~~~l 527 (2693)
+.|.|++++|++++++|+|+|+|+++. ++|++++|++...+|+|+||||||||+||+++|.+|++||.+...|.||++
T Consensus 481 ~~G~Isqnerr~vtqLLeDli~FVt~~--~nn~q~vL~i~~~kPnRdRQKLmREQniLkQvF~iLkaPF~~~t~g~Gp~l 558 (2706)
T KOG3533|consen 481 KIGVISQNERRSVTQLLEDLILFVTNS--SNNGQDVLKISDFKPNRDRQKLLREQNILKQVFLLLKAPFLPRTTGLGPLL 558 (2706)
T ss_pred hcCccchhHHHHHHHHHHHheEEeccC--CcCCCcceeeeccCCchHHHHHHHHHHHHHHHHHHhcCcCccccCCCCcee
Confidence 999999999999999999999999998 679999999999999999999999999999999999999998778999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHHHHHHhHHHHHhHHHHHHHHHHHHHHhcCchhhHHHHHHHHhccHHHHHHhhhHHHHH
Q psy827 528 RIEELNDPKNAPYKYMFRLCYRILRLSQQDYRKNQEYIAKHFGFMQKQIGYDILAEDTITALLHNNRKLLEKHITAAEIE 607 (2693)
Q Consensus 528 ~~~el~d~~~~~~k~i~~l~Y~LL~~~~~~NrkNq~yiak~i~~~q~QIgy~~~AedtIteLl~nN~~LLek~I~e~~I~ 607 (2693)
++++++|+++++|++|||+|||+||+++++|||||+|||++|+.||+|||||+.||||||+++|||++||+|||+..||+
T Consensus 559 rleeLsDqrnap~k~mfrLCYrvLr~SQqdYRKNQEyiAk~Fg~mQ~QIGyDilAEDTiTalLHNNrKLLEKhita~eie 638 (2706)
T KOG3533|consen 559 RLEELSDQRNAPFKTMFRLCYRVLRHSQQDYRKNQEYIAKKFGEMQEQIGYDILAEDTITALLHNNRKLLEKHITAPEVE 638 (2706)
T ss_pred eHHhhcCccccHHHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHHHhchhhhhhhhHHHHHccCHHHHHHhcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccCchhHHHHHHHHhhcCCccccccHHHHHHhhcCCCCccceeeccccCCCCCCCCccccccccccCCCC
Q psy827 608 TFVGLVRKNMHSWQSRFLDYLSDLCISNKKAIAITQELICKSVLSSRNADILIETGMTKPSTNASPTNELLMNGEINHKE 687 (2693)
Q Consensus 608 ~fI~Ll~kn~~~r~~~~LdfLssLCv~ng~aI~~NQelIck~lL~~~n~dll~~T~l~~~~~~~~~~~~~~~~~~i~~~~ 687 (2693)
+||+|+|+| |+||||||||+||||||+||+++||+||+++|+++|+|||++|++++.....+|.... ...
T Consensus 639 tFVsLvRkN---re~rFLDYLsDLCVsn~~ai~vtQELICk~vLs~kn~DIli~Tki~~~~~~~~~~~~~-------~~~ 708 (2706)
T KOG3533|consen 639 TFVSLVRKN---REPRFLDYLSDLCVSNGEAIPVTQELICKSVLSPKNRDILIDTKIIDGEIEVGPVSSY-------KGV 708 (2706)
T ss_pred HHHHHHHhc---CCchHHHHHHHHHhhCCcccHHHHHHHHHHhcCCCCCceEEEeeeeeeecccCccccc-------ccC
Confidence 999999999 9999999999999999999999999999999999999999999998754443333322 234
Q ss_pred CCceEEEEEcccch---hhhHHHHHHhhhcCCcchhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCCCHHHHHHhhhcC
Q psy827 688 PTEEVVLLWNQRKY---SKLLVALSRNAKLGIKHDIALLDYYRHQLNLFSNMCLNRQYLALNNLSPHLDIDLIRKCMADE 764 (2693)
Q Consensus 688 ~~~~v~l~w~~~~~---~k~l~~l~~~~~~~~~~d~~~l~Y~~~QL~Lfs~lC~~RNy~ai~~ls~~~~~d~ll~ci~d~ 764 (2693)
++++||+.|.+.+. .|+++++|+.|+.+++.|.++++|||+||+|||+||++|||+||+.||+++|+|++++||+|+
T Consensus 709 ~~eevwl~W~~~n~e~h~K~~r~lAq~Ak~g~~~d~~vL~YYR~QLnLfsrMCldrQYLAi~eiS~qL~vdLil~CmsDe 788 (2706)
T KOG3533|consen 709 DEEEVWLTWADNNKEIHRKSLRDLAQGAKSGNSDDAEVLDYYRHQLNLFSRMCLDRQYLAIDEISQQLPVDLILQCMSDE 788 (2706)
T ss_pred CcceeEEEecCCchhhHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHhhhhHhhHhhhccccChHHHHHHhccc
Confidence 67899999977643 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhccCCCCCCCCcccccccccccCCcccccccCCCCC-CCchhHHHHhhhcccccccC------
Q psy827 765 NVPYELRASFCRLMLHLHVDRDPQEPVTPVKYARLWSEIPSKMSINDYDTNRT-PDPNKEAVRQRFSSTISFRN------ 837 (2693)
Q Consensus 765 ~lp~~LRA~Fc~Lml~lyVD~dP~e~v~~~~~~Rlw~~i~~~~~i~~yd~~~~-~~~~~~~~~~~f~~~~~f~e------ 837 (2693)
++||+|||+|||||+|||||||||++|+||+|||+|++||++++|+|||+... ....+..++.+|+.+|.|+|
T Consensus 789 ~lPydLRaSFcrLMLHlHVdRdpqe~vtpvryARLW~eIP~~i~i~dYds~~~~~d~sr~~~k~kfa~tm~fVE~YL~~v 868 (2706)
T KOG3533|consen 789 RLPYDLRASFCRLMLHLHVDRDPQEPVTPVRYARLWWEIPENINISDYDSVSVEADGSRMRIKEKFAHTMAFVETYLMGV 868 (2706)
T ss_pred cCChhHHHHHHHHHhheeeccCCccccchhHHHHHHhhccccceecccccccccccccHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998433 22234489999999999986
Q ss_pred -----------ch---hHHHHHHHHHHHhcccChhHHHHHHHHHHHHhhccCCCcccc-CCCCCCCCCcceecccccchh
Q psy827 838 -----------PK---KYVVKLARDLIYFGFYSFSDLLRLTKTLLSILDCISDDDYIK-GKIPTAEGGVLRSIGDMGAVV 902 (2693)
Q Consensus 838 -----------~~---~eVv~l~~~LI~FGfYs~~dLl~L~~~Ll~Ild~~~d~~~~~-~~~~~~~~~v~~si~~~~~~~ 902 (2693)
++ ||||+|||.|||||||||+||+||+++||+|+||+++++... ..+.+++++|.|+|+++|.+|
T Consensus 869 v~q~~~f~d~eknKLTfEvV~LArnLiyFgFYsFsdLLrLT~tLLaIidcv~~t~~~~~a~~~~~~~~v~Rsi~~v~~~M 948 (2706)
T KOG3533|consen 869 VNQSMPFQDVEKNKLTFEVVNLARNLIYFGFYSFSDLLRLTQTLLAIIDCVPATEQGEFASEAEGGVNVHRSIVGVGRNM 948 (2706)
T ss_pred hcccccccchhccccceeHHHHHHHHHHhccccHHHHHHHHHHHHHHHhcCCCcccchhhhhccCCCcHHHHHHHHHHHH
Confidence 11 999999999999999999999999999999999999876542 234467889999999999999
Q ss_pred hccccCcCCCCCC----CCccccccccccccCCCchHHHhHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccccccccC
Q psy827 903 TGLTLGASGIGPN----EPSSVQNKTKLLSKEGYPLVMDTKLKIIEILQFILDVRLDYRISCLLCIFKQEFDETEKFTSN 978 (2693)
Q Consensus 903 ~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~KlkIceIL~~ilDvRlDyrI~~lL~~FK~~f~~~~~~~~~ 978 (2693)
+.++++++...++ ..++...+......+++.+||+||++|+||||||||||+||||+++|++||++|++.+....+
T Consensus 949 s~~vl~~g~~~~~~~~a~~ps~~~k~~~~~e~e~~~vmdTKLkiiEILQFil~VRlDYRIs~lLsifK~eF~e~~~~~~s 1028 (2706)
T KOG3533|consen 949 SKSVLRGGNKENSKDLAKTPSVTAKEAGRTEEEDALVMDTKLKIIEILQFILDVRLDYRISMLLSIFKNEFPEDNVAAES 1028 (2706)
T ss_pred HHHHHccCCCCCccccCCCCccchhhcCcccccceeeeehhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccc
Confidence 9999976432221 112222333344577889999999999999999999999999999999999999988654432
Q ss_pred c--c--ccCCccc-cchhhhhhhhhccccCCccccc-ccccCCCCccHHHHHHHhhcCCCchhHHHHHHHHHhhcchHHH
Q psy827 979 E--T--VSIGNRT-IDLELIGTQAEGIFGNSTECEA-LDLDGHGGRTFLRVLLHLAMHDYPALVSGALHLLFRHFSQRQE 1052 (2693)
Q Consensus 979 ~--~--~~~~~~~-~~~~~~~~~~~~~F~~~~~~~~-~dlD~~~g~~fl~vLl~L~~~d~~~L~~~aL~LL~R~FsQr~E 1052 (2693)
. + +....+. -++++++.+|++||+++.+..+ +++||.|||+|+|||+||+|||||||+|+||+|||||||||||
T Consensus 1029 ~a~G~a~~~~sa~~~~le~i~~qae~if~~~rs~~~~l~lD~~gGrtfLrvLlhltMhDY~PLvSgALqllFrHFsQrqE 1108 (2706)
T KOG3533|consen 1029 VADGAASLMHSASINNLERIASQAEAIFGGERSSGHELHLDGRGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQE 1108 (2706)
T ss_pred cccCccccCcccccccHHHHHHHHHHHhccccCCCccccccCCccHhHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 1 1 1122222 2579999999999999887666 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCcEEEEecCchhHHHHHHHHHHhhhhccCCCcccccccceeEEEecchhHHHHHHHHHhHHHHHHhhh
Q psy827 1053 VLQAFKQLVNAGEDVLVFYNDKSSFQQFIAMMQNQRTRMDESSPLRSKTIQLVQLLVSDADVESYKQIKSDLDVLRQSVE 1132 (2693)
Q Consensus 1053 ll~~l~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vQLLvs~~dv~~y~~ik~~l~~Lr~~ve 1132 (2693)
++++|+| ||||||++||++|+|||+|||.||.+||
T Consensus 1109 vlqafkQ---------------------------------------------VQLLVS~qDVenYkqIk~dLd~Lr~~vE 1143 (2706)
T KOG3533|consen 1109 VLQAFKQ---------------------------------------------VQLLVSNQDVENYKQIKRDLDILRNLVE 1143 (2706)
T ss_pred HHHHHHH---------------------------------------------heeeecccchHHHHHHHHHHHHHHHHhh
Confidence 9999999 9999999999999999999999999999
Q ss_pred hhhhhhhhccCCccccccc-CCCC--CCCCccccchhhHHHHHHHHhhhhccCCccceeeecccCCCccchhccccCCCC
Q psy827 1133 KSELWVYKSKNGEEHGKKH-SKAG--AEDDDDAGKETLYHIELVKLLACCTMGKNVYTEIKCHSLLPLDDIVAMVSHPDC 1209 (2693)
Q Consensus 1133 kSElWv~k~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1209 (2693)
||||||+|+.+..+..+.. .+++ +++.-+++
T Consensus 1144 KSELWV~k~~~~~~e~~e~~~~~~~~~~~~~~~s---------------------------------------------- 1177 (2706)
T KOG3533|consen 1144 KSELWVHKDRHHSIDTKEVDEKERTTEHDLLDDS---------------------------------------------- 1177 (2706)
T ss_pred HhhheeeccCCCCcccccccccccccccccchhh----------------------------------------------
Confidence 9999999966554222111 1100 00000000
Q ss_pred ccccccccccCCCCC-CCCchhhHHHHHHHHHHHHHhhhcccCCCCCCCCCchhhhhHHHhhcchhhhhhhccCccCchh
Q psy827 1210 IPEQGSAIDLDIGPP-IHADQAEEYKKIQQILIRMNKLCISRATPLSPVKPRKHEQRLLRNVGVHTIVLDLLQVPYDMKE 1288 (2693)
Q Consensus 1210 ~~~~~~~~~~~~~~~-~~~~~~~~y~~~~~~l~~~~~~c~~~~~~~~~~k~~~~~Q~llrn~g~h~~vl~ll~~~~~~~~ 1288 (2693)
-+...+......|+ .+..++..|+++++||+|++++|+..++ .||++++||||||||||+|||+|||+|||++.
T Consensus 1178 -~e~~~~e~~~~~pq~~~~~~~~~Yr~vkeiLiRl~k~Cv~~~~----~k~rk~~QrLLkNmg~h~VvLdllqiPydkk~ 1252 (2706)
T KOG3533|consen 1178 -MEALMAELNEHYPQIRDKAPSIAYRLVKEILIRLTKMCVRKGD----PKPRKMNQRLLKNMGVHEVVLELLQIPYDKKH 1252 (2706)
T ss_pred -hhhhhhhhcccCCccccccchhhhHHHHHHHHHHHHHHhhCCC----CCccHHHHHHHHhcchHHHHHHHHhCcccccc
Confidence 00000011111111 2345677899999999999999998643 79999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhccChhhHHHHHHhhhhhhccCchHHHHHHHHhhccHHHhhhhhHHHHHHHHHHHHhhCccc
Q psy827 1289 DIRMNELMRLAHQFLQNFCLGNQQNQVLLHKHLDLFLNPGIREAQTVCSVFQDNSNLCNEVNEKVIQHFVHCIETHGRHV 1368 (2693)
Q Consensus 1289 d~~m~el~~~~~~fL~~Fc~~N~~NQ~lL~~~l~~fl~~~i~e~~~l~~If~~N~~Lc~~v~e~~i~~~v~~i~~~gr~~ 1368 (2693)
|.+|.|||+++|+|||+||+||+|||.+||||+++|++||+.||+||++||+||.+||++|+|+|++|||||||+||||+
T Consensus 1253 D~~M~elm~laHeFLqnFC~gN~qNQ~lLhkhi~lfl~pG~LEa~Tm~~IF~nN~~Lcsev~e~vvqHfVh~ie~hgR~v 1332 (2706)
T KOG3533|consen 1253 DHKMMELMTLAHEFLQNFCKGNKQNQSLLHKHISLFLDPGMLEAGTMVAIFRNNRELCSEVPEEVVQHFVHLIETHGRNV 1332 (2706)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCcchhhHHHHHHHHHhhHHHHhhCcHHHHHHHHHHHHHcCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhchhhchHHhhhHHHHH-----------------------------------------------------
Q psy827 1369 QYLKFFQTIVKAEDQFIRKCQDMVMQE----------------------------------------------------- 1395 (2693)
Q Consensus 1369 ~yL~fl~tivk~~~~~i~~~Q~~V~~~----------------------------------------------------- 1395 (2693)
+||+||||+||++|+||++||||||+|
T Consensus 1333 ~yl~fLqt~Vkae~k~ikkcQdmVm~El~nagddVlvfYnD~aSf~~l~~MM~~erdr~~~~s~~spL~YHI~LV~LLA~ 1412 (2706)
T KOG3533|consen 1333 IYLEFLQTLVKAEGKEIKKCQDMVMNELCNAGDDVLVFYNDNASFEELEAMMKDERDRKGRSSSRSPLKYHIELVRLLAM 1412 (2706)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHhcCCCcEEEEecCcccHHHHHHHHHHHHhcccccccCCchhhHHHHHHHHHH
Confidence 999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q psy827 1396 -------------------------------------------------------------------------------- 1395 (2693)
Q Consensus 1396 -------------------------------------------------------------------------------- 1395 (2693)
T Consensus 1413 Ct~GKNvyTEiKCnsllplddIVrVVth~dCipEVK~aYvnflnHCYiDTevEMKeiYtsnh~w~lfenflvDi~r~~~~ 1492 (2706)
T KOG3533|consen 1413 CTEGKNVYTEIKCNSLLPLDDIVRVVTHKDCIPEVKTAYVNFLNHCYIDTEVEMKEIYTSNHVWHLFENFLVDIRRLCVE 1492 (2706)
T ss_pred HhcCCccceeeeecccCChhHheeeechhhhhHHHHHHHHHHHHHhhcccHHHHHHHHhhhhHHHHHHHHHHHHHHHhcc
Confidence
Q ss_pred --------------------------------------hhhHHHHHHHHhhhhhhcccccchhhhhhHHHHHHHHHHHHc
Q psy827 1396 --------------------------------------SRQPIFIQLLQAAYKVSQCTWLSASQRLYVENCIRTLTEIAK 1437 (2693)
Q Consensus 1396 --------------------------------------~~q~ifv~ll~~~~r~~~~~~l~~~~k~~ve~~i~~L~~~a~ 1437 (2693)
|||++|+|+||+.+|+++|.|+++++|++||+|||||+++||
T Consensus 1493 ~~~~~ad~tLekyv~~~V~~~l~~FF~sPfSd~st~~qthq~~fvqlLq~~~rl~~c~wl~~~~r~sVe~CIrtLt~~Ak 1572 (2706)
T KOG3533|consen 1493 KLTGAADATLEKYVCHTVTEVLIKFFESPFSDASTDVQTHQKTFVQLLQELTRLEKCKWLGSSSRYSVEECIRTLTKVAK 1572 (2706)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcCccccccchhhhccHHHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999
Q ss_pred cccCCCCcchhhhhHhhhhhhhH----HhHHhHHHHHHccCCcc-cchhhhhhhhhhHHHHhHHHHHHHHHHhhchhHHH
Q psy827 1438 GRSIAIPSDLESQVSAMFNKTTL----LSRQTSRWLQAAKSPKM-ERSQSQLMRLDRSIIEGLQDIVLLLEDQLKPLVQS 1512 (2693)
Q Consensus 1438 ~r~i~ip~~l~~~v~~~~~~~~~----~~~~~~~w~~~~k~~~~-~~~~~~~~~~~~~iie~lq~iv~~le~~~~plv~~ 1512 (2693)
+|+|++|++|++||++++.+.+. .+|.++.|+..+|++.+ ..+.....++|++|||++||||..||++++|++||
T Consensus 1573 ~r~IalP~dLd~qvst~~~k~~s~a~~~qr~a~~wrl~~r~~~~~~~s~~~~~~~~rniie~lqdii~~le~~l~PlvqA 1652 (2706)
T KOG3533|consen 1573 ERNIALPADLDGQVSTVRQKWQSAASSAQRIAIGWRLNRRNTLRPLTSNSMTEHDYRNIIECLQDIIGELEFYLHPLVQA 1652 (2706)
T ss_pred hcCccCCccHHHHHHHHHHHHhhhHHHHHHHHhhhhhhcccCCCccccccchhhhhhHHHHHHHHHHHHHHHHhChHHHh
Confidence 99999999999999999999864 79999999999888655 33444556999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCCchhhhhhccchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhhcc
Q psy827 1513 ELSLLVDILYRPELLFPSGTEARKRCEGGGFIRRLIKHTEKLLEEKEEKLCVKVLRTLREMMAIDSEYGEKVKEAYINFL 1592 (2693)
Q Consensus 1513 E~s~Lvdvl~~pe~lf~~~~~~~~~c~~g~fi~kli~h~~~l~~~~~e~l~v~vl~tl~~m~~~~~~~~ekl~~a~~~~~ 1592 (2693)
|+||||||||+||+|||+||+||++|++|||++|||+||++|||++||+||+|||||||+||.++..||||
T Consensus 1653 ElSvLVdVLh~pELLFpegs~ar~rCesGgfi~KLIqHtk~Lme~keeklCikVLqTLreM~~kk~~yge~--------- 1723 (2706)
T KOG3533|consen 1653 ELSVLVDVLHTPELLFPEGSAARDRCESGGFVAKLIQHTKTLMENKEEKLCIKVLQTLREMCDKKQQYGEQ--------- 1723 (2706)
T ss_pred hhhhhhhhhcchhhcCcCChHHHHHHhcccHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHhhhhhhhh---------
Confidence 99999999999999999999999999999999999999999999999999999999999999998888886
Q ss_pred cccccchHHHHHHHHhhhhhhhHHHHhhhhhhhhHHHhhhhhhhhhhhhhcccccchhhcccCCCCcCCcccchhhHHHH
Q psy827 1593 NHCYIDTEVEMKEIYASNHMWSLFERSFLADMSKVVLVTAYQDIALQSYVANSIMNIITTFFSSPFSDQSTTVQGDILRN 1672 (2693)
Q Consensus 1593 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrk 1672 (2693)
|+.|||
T Consensus 1724 --------------------------------------------------------------------------G~~LRq 1729 (2706)
T KOG3533|consen 1724 --------------------------------------------------------------------------GQQLRQ 1729 (2706)
T ss_pred --------------------------------------------------------------------------HHHHHH
Confidence 899999
Q ss_pred HHHHHHhccccccccccchhcccccccc---cccCCCccchhhcccchHHHhhhhhhcCchHHHHHHHhhcCCChhhHHH
Q psy827 1673 SLLTRYFGKQFIQKQNAFDLRMSAQRNV---VTHGPGAKLLSRAGLTLHEVQSHLDKEGASDLVVELVFKSVNSPSIFVE 1749 (2693)
Q Consensus 1673 ~L~~~y~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~Q~~L~~~GAs~lV~~li~~s~~~~~if~e 1749 (2693)
+|+.||||+......+.-.. ......+ +..++|.+..-++++++.++||+||++||++||+++|+.. ++++||.|
T Consensus 1730 ~Ll~rYf~~~~~~~~p~d~~-~~~~g~l~~~~~~~~g~~~~~~~e~~l~~iQc~LdkeGAs~LV~dlIi~~-~s~~IF~e 1807 (2706)
T KOG3533|consen 1730 LLLQRYFGHHNNHHPPLDRQ-QSKIGELIEAVKEKSGKEETWSQERDLYAIQCKLDKEGASDLVTDLIIME-PSREIFLE 1807 (2706)
T ss_pred HHHHHHhccCCCCCCchhhc-ccccccccccccCCCCcchhhhccccHHHHHhhccccchhhhhHHHhhcC-CcHHHHHH
Confidence 99999999776433221110 0011111 2222355555577889999999999999999999999975 99999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHhhcccccchhhHhhhcccccccchhhhhhhhc
Q psy827 1750 AVELGIALLEGGNPIIQKSMYNKLLGGDLSQSFFKVFYDKMKDAQQEIKSTVTVNTSDMAAKAHEDKDQHKDLDKLNKRK 1829 (2693)
Q Consensus 1750 ~i~l~iaLL~GGN~~vQ~s~~~~l~~~~~se~FF~~i~~~m~~a~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1829 (2693)
+|.||||||+|||+++|+|||..|+++++||+||++|++||+.||+|||+||+||++|++++++.+.. .
T Consensus 1808 aI~LaiaLLegGN~~iQ~sf~~~~~~d~~se~FFKv~~drmk~AQqeikstvtvnt~Dl~~k~~~d~~-----------~ 1876 (2706)
T KOG3533|consen 1808 AIHLAIALLEGGNTKIQHSFYMRMKQDDKSEPFFKVILDRMKTAQQEIKSTVTVNTSDLGPKVSEDAT-----------V 1876 (2706)
T ss_pred HHHHHHHHHhcCChHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhhheeeeccccCCccccccc-----------C
Confidence 99999999999999999999999999999999999999999999999999999999999998876521 1
Q ss_pred cccCCccccHHHHHHHHHhhhhhhhhhhhccCCCCCCCccchhcccCchhHHHHHHHHHhhhccccccccccchhhHHhH
Q psy827 1830 IKTNGMILTEELREELNQAAFATTQAFAVARSTPQGEDVSNLVLNQGSALEDMLAEKLERQRDREDQNGLSGKILVMQPV 1909 (2693)
Q Consensus 1830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~i~~~~~i 1909 (2693)
++.+..+++++++.+++.++.++..+++++|.+. +|+.+....+.+.+ ...++..++..+++++.+|+||
T Consensus 1877 ~~~~tt~lte~~k~~l~~~s~at~~a~~~~R~~~-~~e~~~~~~~~~~~---------~~~d~~~~~~~ms~~v~imqPI 1946 (2706)
T KOG3533|consen 1877 PRDSTTVLTELIKAGLTGFSGATFEAPQQVRHPS-IPEMSLTHSGPDLA---------PYQDEEKSTDALSPEVAIMQPI 1946 (2706)
T ss_pred CCCCccccchhhhcccccccccchhcchhhcCCC-Cccccccccccccc---------ccchhhhhhhccCchhHHHHHH
Confidence 2345667899999999999999999999988865 34422222222111 2233445667899999999999
Q ss_pred HHHHHHhhhcCChhhHhHhhhCCCCCcchhHHHHHHHHhhhcccCCCccccchhhhcchhHHHHHHHHHHHhhhhccccC
Q psy827 1910 LRFLQLLCENHNRDLQNLLRNQNNKSNYNLVSETLMFLDCICGSTTGGLGLLGLYINEYNVALINQTLETLTEYCQGPCH 1989 (2693)
Q Consensus 1910 lr~lqllCeghn~~~Qn~lr~Q~n~~~~nlv~e~~~~l~~~~~stt~~l~ll~~~i~~~~~~~~~q~ldTLtE~~QGPC~ 1989 (2693)
||||||||||||++||||||.|+|++|||||+||++||||+|||||||||+||+|||++|+++|+|+|+|||||||||||
T Consensus 1947 LRfLQLLCENHN~dlQNfLR~QnnkTN~NLV~ETLqFLDciCGSTtGgLGllGlyInE~NvaLinQtLetLTEyCQGPCH 2026 (2706)
T KOG3533|consen 1947 LRFLQLLCENHNRDLQNFLRKQNNKTNYNLVSETLQFLDCICGSTTGGLGLLGLYINEHNVALINQTLETLTEYCQGPCH 2026 (2706)
T ss_pred HHHHHHHHhccCHHHHHHHHhccCccchhHHHHHHHHHHHHhcCCCCCceeeeeeeccchhHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccchhccccchhHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHhhCChHHHHHHHHHHH
Q psy827 1990 DNQNCIATHESNGLDIITALILNDINPLGKTRMDLVLELKNNASKLLLAIMESRGDSENAERILYNMNPKQLVDVACRAF 2069 (2693)
Q Consensus 1990 eNQ~~ia~~~s~~~dii~~li~~~i~~l~k~~~dlv~~Lk~~~~kLLLslmE~~~d~~~~~rIl~~l~~~~L~~~~~~~y 2069 (2693)
|||+|||+|||||+|||+|||+|+|+||+++|||+|++||++|||||||+||+|||+|||+||++||+|++||++++++|
T Consensus 2027 ENQnciathEsNGldII~aLiLNdInPLgk~rMdLvLelKnnASKLLLAiMESRhDsENAeRiL~nm~PkqLV~vikkAY 2106 (2706)
T KOG3533|consen 2027 ENQNCIATHESNGLDIIIALILNDINPLGKDRMDLVLELKNNASKLLLAIMESRHDSENAERILRNMRPKQLVHVIKKAY 2106 (2706)
T ss_pred CCcceeeecccCCchhhHHHHhccCCchhhhHHHHHHHHhhhHHHHHHHHHHhcccchhHHHHHHhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcc-ccCCCCCCCCCCCCCCCCCCcccchhhHHHHHHHHHhhhHHHHHhcCCCCCCCChhHHHHHHHHhhccceEEEEE
Q psy827 2070 HQET-LDDGVDSDDSSSSEGDEGVSPKEVGHNIYILCHQLAQHNKDLATLLKPCGTYTDPKMIQALEYYASHTAQIEIVR 2148 (2693)
Q Consensus 2070 ~~~~-~~~~~~~~~~~~~~~~~~~~~~evg~niyiL~~~l~~~n~~l~~~l~~~~~~~~~~~~~Al~f~~~~Ta~IEIvR 2148 (2693)
++.. ++..++ +..+|..+||+|||||||||+||||+||++++.+|||.+.+.++..++|++||++|||||||||
T Consensus 2107 ~q~~~~~~qDd-----~~~dd~~vsPreVGHNIYILahQLarHnkeLq~~Lk~~~~~~~~~~~eaL~yYa~hTaQIEIVR 2181 (2706)
T KOG3533|consen 2107 EQTNSLFRQDD-----KFNDDDIVSPREVGHNIYILAHQLARHNKELQIWLKPSDEKKDDLTREALNYYAEHTAQIEIVR 2181 (2706)
T ss_pred Hhhhhhhhccc-----cCCcCCccCHHHcCchHHHHHHHHHHhhHHHHHHhCCcCCcchhhhHHHHHHHHhccceEEEEe
Confidence 9874 222221 3345566999999999999999999999999999999988888889999999999999999999
Q ss_pred cCCeeEEEEecccccccCCcHHHHHHhhhccccCCccccHHHHHHhhHHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHH
Q psy827 2149 QDRTLEQIVFPIPEICEYLTEDTKSKVYQTAERDDQGSKVSDFFERTEDMFSEMKWQKKLRGQPALFWVSSYMSVWSNIL 2228 (2693)
Q Consensus 2149 ~d~~LE~I~Fpi~~~c~~L~~e~K~~f~~~v~R~s~~sKv~~l~~~~~~l~~em~~~~kL~~~~~l~~~s~~~~lw~~i~ 2228 (2693)
.||+||+|+||+|.+|+|||++||.+++++++||.|||||.|||++++++++||+||+|||++|+++||+++|++|.+||
T Consensus 2182 ~DRtmEqiVFPip~ICeyLT~dtK~rv~nttErDeQGSKV~dFFd~~e~m~nEM~WQrklr~~p~l~W~s~~mslW~sis 2261 (2706)
T KOG3533|consen 2182 RDRTLEQIVFPIPDICEYLTKDTKDRVYNTTERDEQGSKVTDFFDEWETMYNEMIWQRKLRDRPWLSWCARRMSLWTSIS 2261 (2706)
T ss_pred cccchhheeecchhHHHHhhhccceeeecccccccccchHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHhhhhHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCcccccccccchhhhHHHHHHHHHHHHHhhcccCCCCCCCCCcchhhHHHHHHHHH
Q psy827 2229 FNCAVLINLIVAIFYPFPGNYPSQPALFWVSSYMSVWSNILFNCAVLINLIVAIFYPFPGNYPSLSSHFSGFIWSVMLIS 2308 (2693)
Q Consensus 2229 f~lav~INlii~~fy~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~inl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2308 (2693)
|++||+||++|+||||+++.. .+.++++++.++|+++++|
T Consensus 2262 Fn~av~iN~lVAffYPf~~~~----------------------------------------~g~ls~l~sll~W~av~~s 2301 (2706)
T KOG3533|consen 2262 FNLAVIINALVAFFYPFPEHS----------------------------------------NGSLSSLGSLLSWFAVFIS 2301 (2706)
T ss_pred hhHHHHHHHHHHhccCCCCCC----------------------------------------CcchhhHHHHHHHHHHHHH
Confidence 999999999999999998641 2456778899999999999
Q ss_pred hhhccccccccchhHHHHHHHHHHHHhcCCCcchhhhhhhhheeeeeeeeeecccccchhhhhhhhccChhHHHHHHHHH
Q psy827 2309 GVTVMYVPRESGIRTLVVSTILRLIYSMGPEPTLWLLGTLTVVMKGIHLISIMGNQGTFTKQINQIFMDPEILYHLSYVM 2388 (2693)
Q Consensus 2309 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~d~~~~y~~~y~~ 2388 (2693)
..++.+++|++||++++.|+++|+||++|.+||++++|.+++++|++|++||+||+|||.|++..++.|++++||++|++
T Consensus 2302 ~~i~~~l~k~~gir~~i~s~ilr~i~~iG~~~TL~ilGa~nl~nKiV~vvsfvgNkGt~~r~~~aii~d~~~lYh~~Yl~ 2381 (2706)
T KOG3533|consen 2302 FLIAHYLRKIYGIRTILASLILRLISSIGVTPTLYILGALNLVNKIVHVVSFVGNKGTFDRGYAAILADRNLLYHLVYLF 2381 (2706)
T ss_pred HHHHHHhcchhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHhhheeEEEEeecCCcccchhHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccchhhHHhhHHHhhcchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhcccccc------------
Q psy827 2389 FCVLGLCMHPFFYSVLLLDVVYREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKDDFL------------ 2456 (2693)
Q Consensus 2389 ~s~lg~~~~~~f~~~~L~di~~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~~f~------------ 2456 (2693)
+|++|+|+||||||++|||+|||++||.|||+||||||++|+||++|++|++|+|||+||+||+|||.
T Consensus 2382 ~c~lGL~vH~ffYsiLLFDliyrEETL~NVIkSVTRNgrSIvlTa~LALILvYlFSIiGflffkdDF~leVD~l~n~~~~ 2461 (2706)
T KOG3533|consen 2382 ICILGLFVHPFFYSILLFDLIYREETLQNVIKSVTRNGRSIVLTALLALILVYLFSILGFLFFKDDFYLEVDRLENDSAV 2461 (2706)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeHHHHHHHHHHHHHHHHHHHHhcccceEEEecccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred --------------------------------------------------------------------------ccccch
Q psy827 2457 --------------------------------------------------------------------------EPLFVA 2462 (2693)
Q Consensus 2457 --------------------------------------------------------------------------~~~~~~ 2462 (2693)
+++|++
T Consensus 2462 ~~~l~~~~~~~~~~~tc~~enC~~~~p~~~~~~~~~e~kersCdtLlMCIvt~lnqGLRnGGGiGDvLR~Psk~E~lF~a 2541 (2706)
T KOG3533|consen 2462 PSPLSATISSGIPSETCPSENCPGLQPSEKPDDNDDEKKERSCETLLMCIVTTLNQGLRNGGGIGDVLRNPSKWEDLFIA 2541 (2706)
T ss_pred CCccccccccCCccccCCCCCCCCCCCCCCCCcccccchhhhhhHHHHHHHHHHhhhcccCCChhhhhcCCCcccchhHH
Confidence 457999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHhhccccccccccccccccCcchhhhhhhccccchhhhhh
Q psy827 2463 RVIYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQQKELILKNTCFICGLNRSAFDNKTVSFEEHITCEHNMYHYLYFI 2542 (2693)
Q Consensus 2463 r~~~d~~f~~~v~ii~lnii~GiIiDtF~~lR~~~~~~~~d~~~~CfICg~~r~~fd~~~~~f~~Hi~~eHn~wnY~~f~ 2542 (2693)
|++||++||||||||+||+|||+||||||+||+|+|+||+.+|++|||||++|+.||+++++|++|||.|||||||+|||
T Consensus 2542 RV~YDllFffivIiIVLNLIFGVIIDTFaDLRsEKqkKEeILKttCFICgLeR~kFDNktVsFEeHik~EHNmWhYLyfI 2621 (2706)
T KOG3533|consen 2542 RVAYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQKKEEILKTTCFICGLERSKFDNKTVTFEEHIKTEHNMWHYLYFI 2621 (2706)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhHHHHHHhcceeEeecchhhccCceeeHHHhhhhhhhhHHhhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCchhHHHHHHhhcCCCcceecccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy827 2543 VLVKVKDPTEFTGPESYVYAMVKDRNLDWFPRLRAMSLAADEGEAEQIELRSLQSQLETTQFLVTNLSQQLSELRDQMTE 2622 (2693)
Q Consensus 2543 ~~l~~K~~~e~tg~Esyv~~~~~~~~~~wfP~~~a~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ql~~l~~~~~~ 2622 (2693)
+.++.||+||||||||||++|+++++++|||++|||||++.|.++||+|+|++|+++++||.+|.+|+.|++|||+||||
T Consensus 2622 VlvkvKd~Te~TGPESYVaqmvk~~nLdWFPRmrAmSLvs~e~dgeQnE~r~mq~qL~stm~Lv~~ls~Ql~Elk~~MtE 2701 (2706)
T KOG3533|consen 2622 VLVKVKDETEFTGPESYVAQMVKDRNLDWFPRMRAMSLVSSELDGEQNEVRQMQDQLLSTMTLVRELSSQLEELKAQMTE 2701 (2706)
T ss_pred EEEEecCCccccChHHHHHHHHHhcccchhhhhHhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhh
Q psy827 2623 QRKQR 2627 (2693)
Q Consensus 2623 ~~~~~ 2627 (2693)
|||+|
T Consensus 2702 Qrk~r 2706 (2706)
T KOG3533|consen 2702 QRKPR 2706 (2706)
T ss_pred hhcCC
Confidence 99986
No 2
>KOG2243|consensus
Probab=100.00 E-value=1.5e-155 Score=1415.62 Aligned_cols=2230 Identities=23% Similarity=0.349 Sum_probs=0.0
Q ss_pred CccccCC----CCccccCCEEEEEecCccc-----eEEEecCCCCCCeEEecCCCCCCCCCCccccceEEEecCcccHHH
Q psy827 1 MNDMIGS----ASFLHLGDIVSLFAEGNVC-----GFLSTLGLVDDRTVVCPDAGDLANAPKKFRDCLFKICPMNRYSAQ 71 (2693)
Q Consensus 1 ~~~~~~~----~~~L~~GDiVsL~~e~~~~-----gflst~G~~~~~~~v~~~~g~~~n~p~~frdclFkI~P~~~y~Aq 71 (2693)
|+|-.+. .+|||..|.|+|+|..+.. .|++++||+++.|+++|++.. .|.||+..-|-|.+....+.+|.
T Consensus 1 madggeggedeiqflrtddevvlqc~atihkeq~k~claaeg~gnrlcfle~ts~a-k~ippdl~ic~fvleqslsvral 79 (5019)
T KOG2243|consen 1 MADGGEGGEDEIQFLRTDDEVVLQCIATIHKEQQKFCLAAEGFGNRLCFLEPTSEA-KNIPPDLCICNFVLEQSLSVRAL 79 (5019)
T ss_pred CCCCCCCCccceeeeeccchhhhHHHHHHHHHHHhhhhhhhccCcceEEeeccccc-cCCCCceehhhhHHhhhhhHHHH
Q ss_pred HHHHHHHHhccCCcchHHHHHHHHHHHHHhhhhcHHHHHHhcCcEeeeccEEEEeecCCCceEEEcCccchhhccCceEE
Q psy827 72 KQFWKAAKQSASSTTDAVLLKRLHHAAEIEKKQNESENKKLLGMVVQYGSVVQLLHLKSNKFLTVNKRLPALLEKNAMRV 151 (2693)
Q Consensus 72 k~~~k~~k~~~~~~~~~~~l~~Lq~~ae~E~~~N~~e~~k~~G~~V~YG~~IQL~Hv~S~kyLt~~~~~~a~~Ek~a~~V 151 (2693)
+++....-.+....-|...-+=+-.+| +...++.++||++|.|.|..||+||+|.+++.|.++|.||+|
T Consensus 80 qemlant~e~~~~~vdvekwkfmmk~a-----------qggghrtllyghaillrhs~sgmyl~clstsrs~tdklafdv 148 (5019)
T KOG2243|consen 80 QEMLANTGEKGEEGVDVEKWKFMMKAA-----------QGGGHRTLLYGHAILLRHSFSGMYLCCLSTSRSQTDKLAFDV 148 (5019)
T ss_pred HHHHHhccccCCCCcchHHHHHHHHHh-----------cCCCceeeehhhhhhhhccccceEEEEecccccccccceeec
Q ss_pred Ee-ecCCCcceEEEEecCcccccCCCeEeeCCEEEEEEccCCCceeeeeccccCCCCCCceeEEeecCCceeEEEEcccc
Q psy827 152 YL-DANGNEGSWFYILPFYKLRSTGDNVVVGDKVIMNPVNAGQQVLHVAANYELPDNPGCKEVNVVNSSTSWKVTLFMEH 230 (2693)
Q Consensus 152 ~L-~~~~se~s~F~I~P~~K~r~eGd~V~~gD~ViL~~v~~~~~~LH~s~~~~~p~~~~~~EVn~sd~~T~WkI~l~~~~ 230 (2693)
+| ++..+|+|||+|||++|+|+||++|++||+++|++| +..+|||.|. +.|.-.|.++..+|.|.|.|.++.
T Consensus 149 gl~e~~tgeacwwtihpaskqrsegekvrigddlilvsv-sserylhls~------~ng~i~vdaaf~qtlw~v~p~~sg 221 (5019)
T KOG2243|consen 149 GLQEDATGEACWWTIHPASKQRSEGEKVRIGDDLILVSV-SSERYLHLSV------GNGNIHVDAAFMQTLWNVAPICSG 221 (5019)
T ss_pred cccccCcCceeeEEecccccccccCceeeecCceEEEEe-cccceEEEEe------cCCceeecHHHHHHHhccCCCcCC
Q ss_pred cccccCccccCCEEEEEecCCCccccccccccccceeEEeeccCCCCCCCCCCCcEEEEEeecCCCCCCCCccccceeEE
Q psy827 231 RENQEEILKGGDVVRLFHAEQEKFLTMDEYKKKQHVFLRTTGRTSATSATSSKALWEIEVVQHDPCRGGAGHWNCLFRFK 310 (2693)
Q Consensus 231 ~~~~~~~Lk~GDVIRLfH~E~~~~Lt~~~~~~~~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~~Gg~v~w~~~fRLK 310 (2693)
++..++||-||||+||||++++.+||++. ........|.+.|+.++..+.++++|++|..+.. |+|+.++|++.||||
T Consensus 222 s~~~egyligg~v~rl~hghmdecltips-~d~~d~q~r~i~ye~g~~~~~a~slwr~e~lria-wsgs~irwgq~frlr 299 (5019)
T KOG2243|consen 222 SEAAEGYLIGGDVLRLFHGHMDECLTIPS-GDHGDEQHRRIFYEAGAAGTHARSLWRLEPLRIA-WSGSHIRWGQAFRLR 299 (5019)
T ss_pred chhhhceeecchHHHHhccCccceeecCC-CCccchhheeeeeeccccccchhhhhcccceeEE-eccCccccCcceeee
Q ss_pred EccCCcceeeeecCchhhhhhhcccccCCCceeEEEEecC------CCCCCCcccccCcccccccCccccCCCeEEEEEc
Q psy827 311 HLATGHYLAAEIDTDETMDQMRSKLRDHHGGSVYHLVSVP------HPNEISSLFELDPTTLTRADSLVPQSSYVRLHHL 384 (2693)
Q Consensus 311 Hl~TG~YLa~~~~~~~~~~~~~~~~~~~~~~~~f~L~~~~------~~~~~~s~F~L~~~~~~~~d~~V~~~SyvrIqH~ 384 (2693)
|++||.||+..++ .+....++-+++...+.|.++..+ +..-...+-+|+.+.++++|+.+ +|||+
T Consensus 300 h~ttg~ylal~ed---k~lil~dk~kad~kstafsfraskelkekld~~~kkdidgmg~~eikygdsvc------~iqhi 370 (5019)
T KOG2243|consen 300 HLTTGHYLALMED---KGLILMDKAKADTKSTAFSFRASKELKEKLDSGHKKDIDGMGTPEIKYGDSVC------FIQHI 370 (5019)
T ss_pred eccccceeeeecc---CCceeechhhcccccceeEeeccHHHHHhhccccccccccCCCcceecCceee------eeeee
Q ss_pred ccCceEEeeccccCCCCCCcc----ccCCccccccceEEeecChhhhhhhHHHHHHHHHHHHHHHhhhcCCCCh------
Q psy827 385 CTNTWVHSTSIPIDKDEEKPV----GCAPLKEDKEAFALIPVSPTEVRDLDFANDACKVLAANSSKLENGSISQ------ 454 (2693)
Q Consensus 385 ~T~~WL~~~~~~id~~e~~~v----~~~~~k~d~daF~i~~v~~~Evrd~~f~~s~~~vL~~~~~~l~~~~i~~------ 454 (2693)
.||.|++|.+.......--|+ -+....+.+|...+.++..+|.+.+..+++...++.+|++.+...+-..
T Consensus 371 ~sglw~tyka~d~ks~rlg~ikrk~ilh~eghmddgisl~r~q~ees~~ariir~t~~lf~~fi~gldals~~~kas~~~ 450 (5019)
T KOG2243|consen 371 ASGLWLTYKAQDAKSSRLGPIKRKAILHHEGHMDDGISLQRCQHEESQAARIIRNTTALFNQFIRGLDALSGKAKASAAD 450 (5019)
T ss_pred ccceeEEEeecccchhcccchhhhhhhhccccccCccchhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhccccccccCC
Q ss_pred --hhHHHHHHHHHHHHhhhcCc------ccccchhhhhhhhcCCCChHHHHHHHhhchHHHHHHHhcccccccccCCCCc
Q psy827 455 --NERRAVTSLLQDIVYFIAGL------ENEQNKSEALELSVVNPNRDRQKLLREQYILKQLFKILQAPFLEIVEGEGPF 526 (2693)
Q Consensus 455 --~~~~~v~~~L~dLi~F~~~~------e~~~n~~~~L~~~~~~pnr~RQkLLREq~iL~lL~~iL~~pF~~~~~~~~~~ 526 (2693)
.....|...|+|||.|+.+. |+.+|+.++| ++||+||+|+|+|.+++++++. ...+....+|
T Consensus 451 itlpie~v~~slqdli~yf~ppde~l~hedkqnklral--------knrqnlfkeegmi~lvl~cidr--l~iy~s~ahf 520 (5019)
T KOG2243|consen 451 ITLPIEEVLLSLQDLIAYFHPPDEELEHEDKQNKLRAL--------KNRQNLFKEEGMIALVLECIDR--LHIYNSAAHF 520 (5019)
T ss_pred ccccHHHHHHHHHHHHhhcCCchHHhhhhhhHhHHHHH--------hhHHhHhhhhhHHHHHHHHHHH--HhhhhhHHHh
Q ss_pred ccccccCCCCCCcHHHHHHHHHHHHHHHhHHHHHhHHHHHHHHHHHHHHhcCchhhHHHHHHHHh---ccHHHHHHhhhH
Q psy827 527 LRIEELNDPKNAPYKYMFRLCYRILRLSQQDYRKNQEYIAKHFGFMQKQIGYDILAEDTITALLH---NNRKLLEKHITA 603 (2693)
Q Consensus 527 l~~~el~d~~~~~~k~i~~l~Y~LL~~~~~~NrkNq~yiak~i~~~q~QIgy~~~AedtIteLl~---nN~~LLek~I~e 603 (2693)
.. -.++.....|+.|.+++|.+|+.++++||+||..++..++|+.+.+. ...|+..|.+++| ..++...+.|.+
T Consensus 521 a~--ia~~eag~awk~iln~ly~llaalirgnr~ncaqfs~~ldwliskld-rleassgilevlhcil~espealnii~e 597 (5019)
T KOG2243|consen 521 AD--IAGEEAGEAWKEILNLLYELLAALIRGNRKNCAQFSGNLDWLISKLD-RLEASSGILEVLHCILTESPEALNIIAE 597 (5019)
T ss_pred hh--hhhhhhhhHHHHHHHHHHHHHHHHHhcchhhHHHhcCcHhHHHHHHH-HhhhccchHhHhhhhhcCCHHHHhHHhh
Q ss_pred HHHHHHHHHHhhccccCchhHHHHHHHHhhcCCccccccHHHHHHhhcCCCCccceeeccccCCCCCCCCc---------
Q psy827 604 AEIETFVGLVRKNMHSWQSRFLDYLSDLCISNKKAIAITQELICKSVLSSRNADILIETGMTKPSTNASPT--------- 674 (2693)
Q Consensus 604 ~~I~~fI~Ll~kn~~~r~~~~LdfLssLCv~ng~aI~~NQelIck~lL~~~n~dll~~T~l~~~~~~~~~~--------- 674 (2693)
.||+++|+|+.| |||++++||.||+||+|+|+||+.||.+||+.||+.+ |++++|++++.+.++||.
T Consensus 598 ghiksiislldk--hgrnhkvldilcslc~c~gvavranq~licdnllp~r--~lllqtrlin~vss~rpniflgvaegs 673 (5019)
T KOG2243|consen 598 GHIKSIISLLDK--HGRNHKVLDILCSLCLCHGVAVRANQHLICDNLLPGR--DLLLQTRLINDVSSIRPNIFLGVAEGS 673 (5019)
T ss_pred hhHHHHHHHHHh--cCCcccHHHHHHHHHhhcceeeeccCceeccccCCcc--hhhHHHHhhhhhhhcCCceeEeeccch
Q ss_pred --------------------------------------------------------------------------------
Q psy827 675 -------------------------------------------------------------------------------- 674 (2693)
Q Consensus 675 -------------------------------------------------------------------------------- 674 (2693)
T Consensus 674 aqykkwy~el~id~~dpf~tae~thlrvgwass~gyap~pggge~wggngvgddl~sygfdglhlwsg~i~r~vas~nqh 753 (5019)
T KOG2243|consen 674 AQYKKWYFELIIDHTDPFLTAEATHLRVGWASSEGYAPCPGGGEEWGGNGVGDDLFSYGFDGLHLWSGCIARAVASPNQH 753 (5019)
T ss_pred HHHHHHHHHHhhhcCCcceecccceeeeeeeccCCCCCCCCCcccccCCCccchhhhcCCCcchhhcccchhhhcChhhh
Q ss_pred --------------------------------------------------------------------------------
Q psy827 675 -------------------------------------------------------------------------------- 674 (2693)
Q Consensus 675 -------------------------------------------------------------------------------- 674 (2693)
T Consensus 754 llrsddvisccldl~~psisfringqpvqgmfenfn~dglffpv~sfsagikvrfllggrhgefkflpp~gyapcyea~l 833 (5019)
T KOG2243|consen 754 LLRSDDVISCCLDLGAPSISFRINGQPVQGMFENFNIDGLFFPVMSFSAGIKVRFLLGGRHGEFKFLPPPGYAPCYEALL 833 (5019)
T ss_pred hhcccchhhhhhhcCCCceEEEECCccchhHHhcCCCcceeeeeEeeccCeEEEEEecccccceeecCCCCCccHHHHhC
Q ss_pred --------------------------------------------------------------------------------
Q psy827 675 -------------------------------------------------------------------------------- 674 (2693)
Q Consensus 675 -------------------------------------------------------------------------------- 674 (2693)
T Consensus 834 pkeklk~e~~keyk~d~~~~rdllg~t~~lsqaaf~p~pvdtsqiilpphlekirdklaenihelw~mnkielgw~~g~i 913 (5019)
T KOG2243|consen 834 PKEKLKLEHSKEYKQDADGIRDLLGPTQFLSQAAFIPCPVDTSQIILPPHLEKIRDKLAENIHELWGMNKIELGWQFGKI 913 (5019)
T ss_pred cHhhhccchhHhhhhcchhhhhhccchhhhhhhccccccccccccccChHHHHHHHHHHHHHHHHhcccceeecceeccc
Q ss_pred --------------------------------------------------------------------------------
Q psy827 675 -------------------------------------------------------------------------------- 674 (2693)
Q Consensus 675 -------------------------------------------------------------------------------- 674 (2693)
T Consensus 914 rddnkrqhpclvefsklpe~eknynlqms~etlktllalgchi~~~~~~aed~~kk~klpkny~ls~gykpapldls~ik 993 (5019)
T KOG2243|consen 914 RDDNKRQHPCLVEFSKLPEQEKNYNLQMSLETLKTLLALGCHIAHSDEAAEDDLKKMKLPKNYMLSNGYKPAPLDLSDIK 993 (5019)
T ss_pred cCCccccCceeeecccCchhhhccchhhhHHHHHHHHHhcccccccChhhhhHHHhccCCcceeccCCCCCCCCcHHhcc
Q ss_pred --------------------------------------------------------------------------------
Q psy827 675 -------------------------------------------------------------------------------- 674 (2693)
Q Consensus 675 -------------------------------------------------------------------------------- 674 (2693)
T Consensus 994 l~p~qe~lvdklaenahnvwakdrikqgwtygiqqd~knkrnprlvpy~~lddrtkksnkdslreavrt~~gygynie~~ 1073 (5019)
T KOG2243|consen 994 LLPPQEALVDKLAENAHNVWAKDRIKQGWTYGIQQDLKNKRNPRLVPYALLDDRTKKSNKDSLREAVRTFLGYGYNIEAP 1073 (5019)
T ss_pred cCCcHHHHHHHHHHhhhhhhHHHHHhcccchhhhhHhhccCCCccccccccchhhcccchHHHHHHHHHHhcccccCCCC
Q ss_pred --------------------------------------------------------------------------------
Q psy827 675 -------------------------------------------------------------------------------- 674 (2693)
Q Consensus 675 -------------------------------------------------------------------------------- 674 (2693)
T Consensus 1074 dqdl~~a~~e~~sgt~dk~r~fr~eksyavkagkwyfefe~vt~gdmrvgwarpgc~pd~elgadd~af~fdg~k~qrwh 1153 (5019)
T KOG2243|consen 1074 DQDLAAAAAEKCSGTGDKFRFFRAEKSYAVKAGKWYFEFETVTAGDMRVGWARPGCQPDQELGADDQAFAFDGFKAQRWH 1153 (5019)
T ss_pred chhHHHHHHHHhcCCcceeEEEeeehhheeeccceEEEEEEeeccceeecccCCCCCcchhhCCccceeeeccchhhhhh
Q ss_pred --------------------------------------------------------------------------------
Q psy827 675 -------------------------------------------------------------------------------- 674 (2693)
Q Consensus 675 -------------------------------------------------------------------------------- 674 (2693)
T Consensus 1154 qg~~~~grswq~gdvvgcmi~l~d~sm~ftlngeili~~~gselaf~d~di~~gfipic~lg~aqigrmn~g~d~st~k~ 1233 (5019)
T KOG2243|consen 1154 QGNEHFGRSWQAGDVVGCMIDLDDASMIFTLNGEILIDDKGSELAFADFDIEDGFIPICCLGLAQIGRMNFGKDASTFKF 1233 (5019)
T ss_pred ccccccccccCCCCeEEEEEecccceEEEEEcCeEEEcCCCCeeeeccccccCCceeeeehhhHhhcccccCCcccceee
Q ss_pred --------------------------------------------------------------------------------
Q psy827 675 -------------------------------------------------------------------------------- 674 (2693)
Q Consensus 675 -------------------------------------------------------------------------------- 674 (2693)
T Consensus 1234 ~ticglqeg~epfavn~nrdi~mw~skrlp~f~~vp~~h~hiev~ridgtids~pclkvt~ksfgsqnsn~di~~~rlsm 1313 (5019)
T KOG2243|consen 1234 FTICGLQEGFEPFAVNMNRDIAMWFSKRLPQFLNVPKDHEHIEVMRIDGTIDSPPCLKVTHKSFGSQNSNADIIFCRLSM 1313 (5019)
T ss_pred eeeecccccCccceecccchHHHHHHhhchhhhcCCCCCCceEEEEeccccCCCcchhhhhhhhccCCCCCceEEEEecC
Q ss_pred --------------------------------------------------------------------------------
Q psy827 675 -------------------------------------------------------------------------------- 674 (2693)
Q Consensus 675 -------------------------------------------------------------------------------- 674 (2693)
T Consensus 1314 piec~~~fs~svagglpgaglfgp~~d~e~ydadsdfevlmktahghlvpdrvdkdkeatkpefnnhkdyaqekpsrlk~ 1393 (5019)
T KOG2243|consen 1314 PIECAESFSHSVAGGLPGAGLFGPCLDLEAYDADSDFEVLMKTAHGHLVPDRVDKDKEATKPEFNNHKDYAQEKPSRLKQ 1393 (5019)
T ss_pred chhHHHHhhhhhccCCCCccccCCccchhhhcccccHHHHHhhcccccCccccccchhccCccccchhhhhhhcchHHHH
Q ss_pred -------------------------------------------cccccccccCCCCCCceEEEEEcccchhh--------
Q psy827 675 -------------------------------------------NELLMNGEINHKEPTEEVVLLWNQRKYSK-------- 703 (2693)
Q Consensus 675 -------------------------------------------~~~~~~~~i~~~~~~~~v~l~w~~~~~~k-------- 703 (2693)
...+..|+ +.--||+.|.......
T Consensus 1394 rfllrrtkpdystshsarltedvladdk~~~d~l~~tst~cyyairif~gq-----dpa~vwvgwit~d~h~y~~~fdl~ 1468 (5019)
T KOG2243|consen 1394 RFLLRRTKPDYSTSHSARLTEDVLADDKDDQDFLMHTSTQCYYAIRIFAGQ-----DPACVWVGWITPDFHLYDEGFDLD 1468 (5019)
T ss_pred HHHhhccCCCccccchhhhhhhhcccchhhHHHHhhccceeEEEEEEecCC-----CCceeEEEeecCchhhcccccCcC
Q ss_pred --------------------------------------------------------------------------------
Q psy827 704 -------------------------------------------------------------------------------- 703 (2693)
Q Consensus 704 -------------------------------------------------------------------------------- 703 (2693)
T Consensus 1469 k~~tvtvtlgdekgkvhesikrsncymv~~gd~~a~~qrs~r~n~~leigc~vd~a~gllsf~angkel~t~yqvep~tk 1548 (5019)
T KOG2243|consen 1469 KNCTVTVTLGDEKGKVHESIKRSNCYMVCAGDIMAPGQRSGRNNNDLEIGCLVDAAMGLLSFIANGKELGTCYQVEPNTK 1548 (5019)
T ss_pred cceEEEEEeccccccHhhhhhhcceeEEecccccccccccCCCCCCceeeehHHhhhhhhhhhccCcccceeEeecCCcc
Q ss_pred --------------------------------------------------------------------------------
Q psy827 704 -------------------------------------------------------------------------------- 703 (2693)
Q Consensus 704 -------------------------------------------------------------------------------- 703 (2693)
T Consensus 1549 ~fpavf~q~ts~~~fqfelgkikn~mplsa~ifkse~knpvpqcpprl~vq~i~~vlwsrmpn~flkvd~~riser~gw~ 1628 (5019)
T KOG2243|consen 1549 LFPAVFAQATSPNLFQFELGKIKNAMPLSAAIFKSEEKNPVPQCPPRLDVQFIQHVLWSRMPNQFLKVDTERISERHGWL 1628 (5019)
T ss_pred ccHHHhhccCCCceeeeehhhhcccCcchHHhhhhcccCCCCCCCCccchHHHHHHHHHhCcchhhhhhhhhhhhhcchh
Q ss_pred -----hHHHHHHhhhcCCc--------chhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCCCHHHHHHhhhcCCCCHHH
Q psy827 704 -----LLVALSRNAKLGIK--------HDIALLDYYRHQLNLFSNMCLNRQYLALNNLSPHLDIDLIRKCMADENVPYEL 770 (2693)
Q Consensus 704 -----~l~~l~~~~~~~~~--------~d~~~l~Y~~~QL~Lfs~lC~~RNy~ai~~ls~~~~~d~ll~ci~d~~lp~~L 770 (2693)
++.-.+.-.+..++ +..+.+.|--|.|.|||.+|.=.|-..-..+..+.+...++..|.+.-+|--|
T Consensus 1629 vqcldplq~malhipeenr~vdilel~eqedllkfhyhtlrlysavcalgn~rva~alcshvd~~ql~yaidnkylpgll 1708 (5019)
T KOG2243|consen 1629 VQCLDPLQFMALHIPEENRCVDILELCEQEDLLKFHYHTLRLYSAVCALGNHRVAHALCSHVDEPQLFYAIDNKYLPGLL 1708 (5019)
T ss_pred hhhcCHHHHHhhcCCcccccchHHHHhhHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhccChHHHHHHHhcccchhhh
Q ss_pred HHHHHHHHHhhhccCCCCCCCC-cccccccccccCCcccccccCCCCCCCchhHHHHhhhcccccccC------------
Q psy827 771 RASFCRLMLHLHVDRDPQEPVT-PVKYARLWSEIPSKMSINDYDTNRTPDPNKEAVRQRFSSTISFRN------------ 837 (2693)
Q Consensus 771 RA~Fc~Lml~lyVD~dP~e~v~-~~~~~Rlw~~i~~~~~i~~yd~~~~~~~~~~~~~~~f~~~~~f~e------------ 837 (2693)
||.|..|++.+|+-........ .-.|.-.-++-...+..-+-.+....-+ +-..+.-+.+-+.|..
T Consensus 1709 rag~ydlli~ihlas~~~~klmm~neyiip~t~~tk~i~lfpde~kkhglp-gigl~t~lkp~~~fssp~fv~~~~d~~k 1787 (5019)
T KOG2243|consen 1709 RAGFYDLLIDIHLASAAEAKLMMKNEYIIPITEETKNICLFPDENKKHGLP-GIGLRTCLKPGFQFSSPCFVSIGEDCQK 1787 (5019)
T ss_pred hhhhHHHhHHHhhhhHHHHHHhhcCceEeeccccccceEecCCcccccCCC-CcchhhhcCCCccccCceeEEechhhhh
Q ss_pred ------------------------------------chhH---HHHHHHHHHHhcccChhHHHHHHHHHHHHhhccCCCc
Q psy827 838 ------------------------------------PKKY---VVKLARDLIYFGFYSFSDLLRLTKTLLSILDCISDDD 878 (2693)
Q Consensus 838 ------------------------------------~~~e---Vv~l~~~LI~FGfYs~~dLl~L~~~Ll~Ild~~~d~~ 878 (2693)
.+|. +++++..|+-+|.|+..| +...|+-| |+.
T Consensus 1788 ~spe~pld~lksk~i~mlteavk~~~~h~rdpvggs~ef~fvp~ikl~~tllimgif~~dd---~k~il~li-----dps 1859 (5019)
T KOG2243|consen 1788 QSPEFPLDILKSKAIQMLTEAVKCGGAHARDPVGGSTEFLFVPLIKLFGTLLIMGIFDDDD---LKHILLLI-----DPS 1859 (5019)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHhccccccCCCCCeeEEeeehHHHHHHHHHheeeccchh---HHHHHHhc-----Chh
Q ss_pred cccCCCCCCCCCcceecccccchhhccccCcCCCCCCCCccccccccccccCCCchHHHhHHHHHHHHHHHHhhhhhHHH
Q psy827 879 YIKGKIPTAEGGVLRSIGDMGAVVTGLTLGASGIGPNEPSSVQNKTKLLSKEGYPLVMDTKLKIIEILQFILDVRLDYRI 958 (2693)
Q Consensus 879 ~~~~~~~~~~~~v~~si~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~KlkIceIL~~ilDvRlDyrI 958 (2693)
.+++.....+.+.+-.-..+..+-..-..+ .+++.....++..+.--+.++.-.+|+++|+.|+|+.|..+..||
T Consensus 1860 vf~e~a~~~ee~dt~eke~vt~vdd~k~~~-----age~~~k~~krp~~gllq~klpe~vklqmc~ll~ylcdce~~hri 1934 (5019)
T KOG2243|consen 1860 VFGEAAAGEEEGDTAEKEEVTQVDDAKAQE-----AGEEAAKEAKRPKEGLLQMKLPEPVKLQMCELLQYLCDCELQHRI 1934 (5019)
T ss_pred hhccccCCccccchhhhhhhcchhhHhhhh-----hhhhhhhccCCchhhhhhccCCcchHHHHHHHHHHHhhhhHHhhh
Q ss_pred H--------------------------------------------------HHHHHHHhh-hccccccccCc--------
Q psy827 959 S--------------------------------------------------CLLCIFKQE-FDETEKFTSNE-------- 979 (2693)
Q Consensus 959 ~--------------------------------------------------~lL~~FK~~-f~~~~~~~~~~-------- 979 (2693)
. |+|-.||.. -.++.+...++
T Consensus 1935 eaivaf~d~~vaklq~nqkfryne~mqalnmsaaltarktkefrsppqeqinmllnfk~~k~~cpcpeeirdel~dfhed 2014 (5019)
T KOG2243|consen 1935 EAIVAFGDDFVAKLQANQKFRYNELMQALNMSAALTARKTKEFRSPPQEQINMLLNFKDDKEECPCPEEIRDELLDFHED 2014 (5019)
T ss_pred HhhhhhhHHHHHHhhccccccHHHHHHHhhhHHHhhhhhhhhccCCcHHHHHHHhhcccCccCCCCcHHHHHHHHHHHHH
Q ss_pred -----cccCCc-----cccchhhhhhhhhcccc-------------CCcccccccccCCCCccHHHHHHHhhcCCCchhH
Q psy827 980 -----TVSIGN-----RTIDLELIGTQAEGIFG-------------NSTECEALDLDGHGGRTFLRVLLHLAMHDYPALV 1036 (2693)
Q Consensus 980 -----~~~~~~-----~~~~~~~~~~~~~~~F~-------------~~~~~~~~dlD~~~g~~fl~vLl~L~~~d~~~L~ 1036 (2693)
+.+.++ ..-|+..-+...--+.+ .+++..+.-+....+++++++--.-...| |+||
T Consensus 2015 ll~hcgi~lded~~~d~~~d~s~~gkl~alv~ki~~~~k~e~ekp~e~d~k~~stlkelisetmi~waqe~~ied-~elv 2093 (5019)
T KOG2243|consen 2015 LLLHCGIELDEDEEEDEEEDLSIRGKLCALVEKIKGLKKKEAEKPTEEDEKCPSTLKELISETMICWAQEDQIED-PELV 2093 (5019)
T ss_pred HHHhcCCccCcccccccccccchhhhHHHHHHHhcCCCcccccCCccccccCchHHHHHHHHHHHHhhhhhhccC-HHHH
Q ss_pred HHHHHHHHhhcchHHHHHHHHHH-hhhcCCcEEEEecCchhHHHHHHHHHHhhhhccCCCcccccccceeEEEecchhHH
Q psy827 1037 SGALHLLFRHFSQRQEVLQAFKQ-LVNAGEDVLVFYNDKSSFQQFIAMMQNQRTRMDESSPLRSKTIQLVQLLVSDADVE 1115 (2693)
Q Consensus 1037 ~~aL~LL~R~FsQr~Ell~~l~q-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vQLLvs~~dv~ 1115 (2693)
...++||.|.|..-.||++++.+ ..+.|-||
T Consensus 2094 r~mf~ll~rqyd~ig~l~~al~ktyti~~~sv------------------------------------------------ 2125 (5019)
T KOG2243|consen 2094 RAMFNLLHRQYDGIGELLQALPKTYTINGTSV------------------------------------------------ 2125 (5019)
T ss_pred HHHHHHHHHhhccHHHHHHhccceeEEcCccH------------------------------------------------
Q ss_pred HHHHHHHhHHHHHHhhhhhhhhhhhccCCcccccccCCCCCCCCccccchhhHHHHHHHHhhhhccCCccceeeecccCC
Q psy827 1116 SYKQIKSDLDVLRQSVEKSELWVYKSKNGEEHGKKHSKAGAEDDDDAGKETLYHIELVKLLACCTMGKNVYTEIKCHSLL 1195 (2693)
Q Consensus 1116 ~y~~ik~~l~~Lr~~vekSElWv~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 1195 (2693)
+++-.|...+--++-|....+||..
T Consensus 2126 ---------------------------------------------~dtinllaalgqirsllsvrmgkee---------- 2150 (5019)
T KOG2243|consen 2126 ---------------------------------------------EDTINLLAALGQIRSLLSVRMGKEE---------- 2150 (5019)
T ss_pred ---------------------------------------------HHHHHHHHHHHHHHHHHHHhccchh----------
Q ss_pred CccchhccccCCCCccccccccccCCCCCCCCchhhHHHHHHHHHHHHHhhhcccCCCCCCCCCchhhhhHHHhhcchhh
Q psy827 1196 PLDDIVAMVSHPDCIPEQGSAIDLDIGPPIHADQAEEYKKIQQILIRMNKLCISRATPLSPVKPRKHEQRLLRNVGVHTI 1275 (2693)
Q Consensus 1196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~l~~~~~~c~~~~~~~~~~k~~~~~Q~llrn~g~h~~ 1275 (2693)
.++.+.+.+.+.+.|...++..+||.+|.|+.
T Consensus 2151 ------------------------------------------------e~lmi~glgdimnnkvfyqhpnlmr~lgmhet 2182 (5019)
T KOG2243|consen 2151 ------------------------------------------------EKLMINGLGDIMNNKVFYQHPNLMRALGMHET 2182 (5019)
T ss_pred ------------------------------------------------HHHHhhhhhhhhcCcccccCchHHHHhhhHHH
Q ss_pred hhhhccCccCchhhhHH--HHHHHHHHHHHHHHhccChhhHHHHHHhhhhhh-ccCchHHH----------HHHHHhhcc
Q psy827 1276 VLDLLQVPYDMKEDIRM--NELMRLAHQFLQNFCLGNQQNQVLLHKHLDLFL-NPGIREAQ----------TVCSVFQDN 1342 (2693)
Q Consensus 1276 vl~ll~~~~~~~~d~~m--~el~~~~~~fL~~Fc~~N~~NQ~lL~~~l~~fl-~~~i~e~~----------~l~~If~~N 1342 (2693)
|++.+.+.+.+.++.++ ++++..|++|||+|||-.+|||..+++|+++++ +..+|.|. +..+-.+||
T Consensus 2183 vmevmvnvlgg~e~~ei~fpkmva~ccrflcyfcrisrqnqkamfdhlsyllenssvglaspamrgstpldvaaasvmdn 2262 (5019)
T KOG2243|consen 2183 VMEVMVNVLGGGEKKEIAFPKMVANCCRFLCYFCRISRQNQKAMFDHLSYLLENSSVGLASPAMRGSTPLDVAAASVMDN 2262 (5019)
T ss_pred HHHHHHHHhcCCccceeccHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCcccccCccccCCCchhhHHhhhccc
Q ss_pred HHHhhhhhHHHHHHHHHHHHhhCccc--------------------hhHHHHHHHHhchhhchHHhhhHHHHH-------
Q psy827 1343 SNLCNEVNEKVIQHFVHCIETHGRHV--------------------QYLKFFQTIVKAEDQFIRKCQDMVMQE------- 1395 (2693)
Q Consensus 1343 ~~Lc~~v~e~~i~~~v~~i~~~gr~~--------------------~yL~fl~tivk~~~~~i~~~Q~~V~~~------- 1395 (2693)
.+|+..+.|..+..+|..++..|-|. +||+||...|-+++..+.+|-+.|+.-
T Consensus 2263 nelalal~epdlekvv~ylagcglqsc~ml~akgypdigwnpiegeryl~flrfavf~n~esveena~vvvkllirrpec 2342 (5019)
T KOG2243|consen 2263 NELALALEEPDLEKVVRYLAGCGLQSCPMLLAKGYPDIGWNPIEGERYLDFLRFAVFCNGESVEENANVVVKLLIRRPEC 2342 (5019)
T ss_pred chhhhhccCcCHHHHHHHHhcCCcccchHHHhCCCCCCCCCcccchhhhhhhhhheeecCccccccchhhhhhhhcCccc
Q ss_pred --------------------------------------------------------------------------------
Q psy827 1396 -------------------------------------------------------------------------------- 1395 (2693)
Q Consensus 1396 -------------------------------------------------------------------------------- 1395 (2693)
T Consensus 2343 fgpalrgeggngllaame~aikiae~pa~d~pspn~g~~k~~~teddeeedd~ihmgnaimsfysalidllgrcapemhl 2422 (5019)
T KOG2243|consen 2343 FGPALRGEGGNGLLAAMEEAIKIAEDPALDGPSPNQGSKKELDTEDDEEEDDIIHMGNAIMSFYSALIDLLGRCAPEMHL 2422 (5019)
T ss_pred cCchhcCCCcccHHHHHHhhhhhccCccccCCCCCCCcccccCccccchhhhHHHhhHHHHHHHHHHHHHHhccCchhhe
Q ss_pred --------------------------------------------------------------------------------
Q psy827 1396 -------------------------------------------------------------------------------- 1395 (2693)
Q Consensus 1396 -------------------------------------------------------------------------------- 1395 (2693)
T Consensus 2423 i~~gkgeairirsilrslip~~dlvgiisi~~klpsi~kdg~v~epdmaa~fcpdhka~mvlfldrvygi~~q~fllhll 2502 (5019)
T KOG2243|consen 2423 IHAGKGEAIRIRSILRSLIPLEDLVGIISIAFKLPSIAKDGNVSEPDMAAGFCPDHKAAMVLFLDRVYGIEDQDFLLHLL 2502 (5019)
T ss_pred eccCCCceEeHHHHHHhhcchhheeeeEEeeecCccccCCCCcCCcccccCCCCCcccceEEeeehhcCcchHHHHHHHH
Q ss_pred ---------------------------------------------------hhhHHHHHHHHhhhhhhcccccchhhhhh
Q psy827 1396 ---------------------------------------------------SRQPIFIQLLQAAYKVSQCTWLSASQRLY 1424 (2693)
Q Consensus 1396 ---------------------------------------------------~~q~ifv~ll~~~~r~~~~~~l~~~~k~~ 1424 (2693)
++-+.+-.+|+..||+++---+...||-+
T Consensus 2503 evgflpdlraaasldt~als~td~alalnryicsavlplltrcaplfagteh~~slids~l~tiyrlskg~sltkaqrds 2582 (5019)
T KOG2243|consen 2503 EVGFLPDLRAAASLDTAALSATDAALALNRYICSAVLPLLTRCAPLFAGTEHCASLIDSLLHTIYRLSKGCSLTKAQRDS 2582 (5019)
T ss_pred HhccchhhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHHhhcchhhccchHHHHHHHHHHHHHHHHhcCcchhhhhhhh
Q ss_pred HHHHHHH-----------------------HHHHHccccCCCCcchhhh-------------------------------
Q psy827 1425 VENCIRT-----------------------LTEIAKGRSIAIPSDLESQ------------------------------- 1450 (2693)
Q Consensus 1425 ve~~i~~-----------------------L~~~a~~r~i~ip~~l~~~------------------------------- 1450 (2693)
+|.|+-. |-+.|| +|..|-+.
T Consensus 2583 ie~cllaic~~lrpsmlq~llrrlvfdvp~lne~~k-----mplklltnhye~cwkyyclp~gwg~~g~a~eeelhls~k 2657 (5019)
T KOG2243|consen 2583 IEECLLAICGHLRPSMLQHLLRRLVFDVPLLNEHAK-----MPLKLLTNHYEQCWKYYCLPGGWGNFGAASEEELHLSEK 2657 (5019)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHhcCcHhhhhhhc-----CcHHHHHhHHHHHHhheeccCcccccccchHHHHhHHHH
Q ss_pred --------------------------------------------------------------------------------
Q psy827 1451 -------------------------------------------------------------------------------- 1450 (2693)
Q Consensus 1451 -------------------------------------------------------------------------------- 1450 (2693)
T Consensus 2658 lfwgifdals~kkyd~dlfklalpclsaiagalppdylds~~~a~lekq~s~dadgnf~pkpi~t~n~sipekley~i~k 2737 (5019)
T KOG2243|consen 2658 LFWGIFDALSHKKYDPDLFKLALPCLSAIAGALPPDYLDSNITAMLEKQISMDADGNFDPKPIDTMNFSIPEKLEYFINK 2737 (5019)
T ss_pred HHHHHHHHhhccccCHHHHHHhhHHHHHHhcCCCchhhhhhHHHHHHHhhcccCCCCCCCCcccccccccHHHHHHHHHH
Q ss_pred -----------------------------hHhhhhhhhHHhHHhH---HH--------------------------HHHc
Q psy827 1451 -----------------------------VSAMFNKTTLLSRQTS---RW--------------------------LQAA 1472 (2693)
Q Consensus 1451 -----------------------------v~~~~~~~~~~~~~~~---~w--------------------------~~~~ 1472 (2693)
+.++.....++++... +| ..+.
T Consensus 2738 yaehshdkwa~dk~~~gw~yg~~~~d~~k~~pl~kp~k~lsekekeiyrwp~keslktmla~~~~~ertkegdalvq~~~ 2817 (5019)
T KOG2243|consen 2738 YAEHSHDKWACDKLANGWIYGEILDDNSKTHPLIKPFKLLSEKEKEIYRWPAKESLKTMLARGMRTERTKEGDALVQMAE 2817 (5019)
T ss_pred HHhcccchhhhhhhccCceeeeeeccccccCcccchhhhhhhhhHHHHcCcHHHHHHHHHHhhceeeecccchHHHHHHH
Q ss_pred cCCcccchhhhh--------------------------------------------------------------------
Q psy827 1473 KSPKMERSQSQL-------------------------------------------------------------------- 1484 (2693)
Q Consensus 1473 k~~~~~~~~~~~-------------------------------------------------------------------- 1484 (2693)
.+..++-++...
T Consensus 2818 ~~k~r~isq~~qvsvda~~~ysp~~idlsnv~lsrdl~~m~e~~aenyhniwakkkkleleskggg~hpllvpydtltak 2897 (5019)
T KOG2243|consen 2818 NEKLRRISQANQVSVDAAHGYSPAAIDLSNVTLSRDLHAMAEMMAENYHNIWAKKKKLELESKGGGNHPLLVPYDTLTAK 2897 (5019)
T ss_pred HHHHHhhhhhcccccccccCCCCcccchhhceehHHHHHHHHHHHHHHHHHHhhhhhceeeccCCCCCceeccccccchh
Q ss_pred -----------------------------------hhhhhHHHHhHHHHHHHHHHhhchhHHHHHHH-------------
Q psy827 1485 -----------------------------------MRLDRSIIEGLQDIVLLLEDQLKPLVQSELSL------------- 1516 (2693)
Q Consensus 1485 -----------------------------------~~~~~~iie~lq~iv~~le~~~~plv~~E~s~------------- 1516 (2693)
+-..|..+.-++.|+....+-.. ..+|+..
T Consensus 2898 ek~kdrekaqdi~kflqing~~vsrg~kdleld~~siekrfay~flkkiikyvd~a~e--~i~~~d~i~s~gk~e~~p~d 2975 (5019)
T KOG2243|consen 2898 EKAKDREKAQDIFKFLQINGIAVSRGFKDLELDAPSIEKRFAYKFLKKIIKYVDEAHE--FIAEFDAIGSRGKGEHFPRD 2975 (5019)
T ss_pred hhhhhHHHHHHHHHHhhcccEEecccccccccCchhHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccccCCCcCCCchH
Q ss_pred ------------HHHHhcccccCCCCchhhhhhccchhHHH---------------HHHHHHHHHhHHHHHH--HHHHHH
Q psy827 1517 ------------LVDILYRPELLFPSGTEARKRCEGGGFIR---------------RLIKHTEKLLEEKEEK--LCVKVL 1567 (2693)
Q Consensus 1517 ------------Lvdvl~~pe~lf~~~~~~~~~c~~g~fi~---------------kli~h~~~l~~~~~e~--l~v~vl 1567 (2693)
|+|-.+....|+--....++.| +||.++ .|+.|.-.|.....-. -|+++|
T Consensus 2976 qeikffakv~lplidqyf~~h~lyflsa~~kpl~-s~g~as~kekemv~~lfckl~~lvrhrislfg~datsiv~clhil 3054 (5019)
T KOG2243|consen 2976 QEIKFFAKVLLPLIDQYFKNHCLYFLSAALKPLC-SGGHASHKEKEMVAGLFCKLAALVRHRISLFGNDATSIVNCLHIL 3054 (5019)
T ss_pred HHHHHHHHHHHHHHHHHHhhceeeeecccccccc-cCCcccchhHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHH
Q ss_pred --------------------------------------------------------------------------------
Q psy827 1568 -------------------------------------------------------------------------------- 1567 (2693)
Q Consensus 1568 -------------------------------------------------------------------------------- 1567 (2693)
T Consensus 3055 ~qtld~rtvmksg~e~vka~lraf~dnaaedlekt~enlk~gkfthsr~q~kgvsq~inyttvallp~lssifehi~qhq 3134 (5019)
T KOG2243|consen 3055 AQTLDARTVMKSGLELVKAALRAFFDNAAEDLEKTMENLKLGKFTHSRNQIKGVSQIINYTTVALLPILSSIFEHIGQHQ 3134 (5019)
T ss_pred HhhhhHHHHHHhhHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccccccchhhhcchhHHHHHHHHHHHHHHhhhhh
Q ss_pred --------------------------------------------------------------------------------
Q psy827 1568 -------------------------------------------------------------------------------- 1567 (2693)
Q Consensus 1568 -------------------------------------------------------------------------------- 1567 (2693)
T Consensus 3135 fg~dlil~dvqiscy~il~slyalgt~k~iyverqr~algeclaa~a~a~pvafle~~l~k~n~~si~ntks~rera~l~ 3214 (5019)
T KOG2243|consen 3135 FGEDLILEDVQISCYHILCSLYALGTGKNIYVERQRPALGECLAAFAAAFPVAFLEPHLDKHNILSIFNTKSPRERAALG 3214 (5019)
T ss_pred cchhhhhhhhhhhhHHHHHHHHhhcCCceeEEEecCchHHHHHHHHHhcCchhhhcccccccCceeeeccCChhhhhhcC
Q ss_pred --------------------------------------------------------------------------------
Q psy827 1568 -------------------------------------------------------------------------------- 1567 (2693)
Q Consensus 1568 -------------------------------------------------------------------------------- 1567 (2693)
T Consensus 3215 lp~~ved~cp~ip~le~lm~ei~dlaesg~rytemphv~evilpmlc~yls~wwe~gpen~p~~~~~cct~~~sehl~~i 3294 (5019)
T KOG2243|consen 3215 LPDNVEDMCPDIPQLEGLMEEINDLAESGARYTEMPHVIEVILPMLCNYLSRWWEHGPENLPERAEMCCTALNSEHLNLI 3294 (5019)
T ss_pred CCCchHhhCCCcHHHHHHHHHHHHHHhcccccccCchHHHHHHHHHHHHHHHHHhhCcccCCccccchhhhhhHHHHHHH
Q ss_pred --------------------------------------------------------------------------------
Q psy827 1568 -------------------------------------------------------------------------------- 1567 (2693)
Q Consensus 1568 -------------------------------------------------------------------------------- 1567 (2693)
T Consensus 3295 lgnilkii~nnlgide~awmkriav~aqpii~k~kp~llkshfip~leklkkka~~~v~eed~lkad~kgd~~eaellil 3374 (5019)
T KOG2243|consen 3295 LGNILKIINNNLGIDEAAWMKRIAVFAQPIINKAKPDLLKSHFIPLLEKLKKKAAKTVQEEDHLKADAKGDMQEAELLIL 3374 (5019)
T ss_pred HHHHHHHHhccCCccHHHHHHHHHHHhhhhhhhcChHHHHhhhHHHHHHHHHHhhhhhchHhhhcccccCchhhhhhHHH
Q ss_pred --------------------------------------------------------------------------------
Q psy827 1568 -------------------------------------------------------------------------------- 1567 (2693)
Q Consensus 1568 -------------------------------------------------------------------------------- 1567 (2693)
T Consensus 3375 def~~l~rdlyafypllir~vd~nra~wlk~p~~dadelfrmvaevfi~w~kshnfkreeqnfviqneinnlafl~~dsk 3454 (5019)
T KOG2243|consen 3375 DEFATLARDLYAFYPLLIRFVDNNRAKWLKEPDADADELFRMVAEVFILWCKSHNFKREEQNFVIQNEINNLAFLIGDSK 3454 (5019)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhccCCCCCHHHHHHHHHHHHHhhhcccccchhhhceehhhhccceeeeecCch
Q ss_pred ------------------------------------HHHHHHhhh-----hhhhhHHHHHHhhhcccccccchHHHH---
Q psy827 1568 ------------------------------------RTLREMMAI-----DSEYGEKVKEAYINFLNHCYIDTEVEM--- 1603 (2693)
Q Consensus 1568 ------------------------------------~tl~~m~~~-----~~~~~ekl~~a~~~~~~~~~~~~~~~~--- 1603 (2693)
..|..|+++ .+.-.|-..-|.+-+.+.-+-+...+.
T Consensus 3455 skmska~~~ksggqdqerkk~krkgd~ys~qtslivaalkkllpiglnic~pgdqelialak~r~s~kdtddevrd~ir~ 3534 (5019)
T KOG2243|consen 3455 SKMSKAAQSKSGGQDQERKKMKRKGDLYSIQTSLIVAALKKLLPIGLNICAPGDQELIALAKNRFSHKDTDDEVRDHIRN 3534 (5019)
T ss_pred hHHHHHHhccccCchHHHHHHhcccchhhhhHHHHHHHHHHhCcccccccCCCcHHHHHHHhccccccCchHHHHHHHHh
Q ss_pred --------------------------------------HHHHhhhhhhhHHHHhhhhhhhhHHH--hhhhhhhhh-----
Q psy827 1604 --------------------------------------KEIYASNHMWSLFERSFLADMSKVVL--VTAYQDIAL----- 1638 (2693)
Q Consensus 1604 --------------------------------------~~~~~~~~~~~~f~~~~~~~~~~~~~--~~~~~~~~~----- 1638 (2693)
+.....++++|.-.++.+.-..-.+. ..-+.++++
T Consensus 3535 nihlq~k~ddpaikwql~lykd~~~~~d~~~dpektverv~~ia~~~fhleqkskrvgrrhyclve~p~rskkavwhkll 3614 (5019)
T KOG2243|consen 3535 NIHLQEKLDDPAIKWQLALYKDLLKREDDFNDPEKTVERVLDIAAALFHLEQKSKRVGRRHYCLVEHPLRSKKAVWHKLL 3614 (5019)
T ss_pred ccchhhccCChHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhhcccceeeecCchhhHHHHHHHHH
Q ss_pred -----------------------------------------hhhhcccccchhhccc-CCCCcCCcccchhhHHHHHHHH
Q psy827 1639 -----------------------------------------QSYVANSIMNIITTFF-SSPFSDQSTTVQGDILRNSLLT 1676 (2693)
Q Consensus 1639 -----------------------------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lrk~L~~ 1676 (2693)
.-+|-+...+.+..-. ..|-...+.+.+-+.|.+++
T Consensus 3615 skqrkravvacfrmaplynlprhrainlfl~gyek~wietee~~fedkliedlak~~k~e~~eede~~k~~dplhqii-- 3692 (5019)
T KOG2243|consen 3615 SKQRKRAVVACFRMAPLYNLPRHRAINLFLHGYEKFWIETEEHSFEDKLIEDLAKPGKAEEEEEDEGEKQPDPLHQII-- 3692 (5019)
T ss_pred HHhhhhHHhhhhhhcccccCchhhhHHHHHhhhhhheeehhhhhhHHHHHHHhccCCCCCCcccccccCCCCcHHHHH--
Q ss_pred HHhccccccccccchhcccccc------cccccCCCccchhhcccchHHH----------hhhhhhcCchHHHHHHHhhc
Q psy827 1677 RYFGKQFIQKQNAFDLRMSAQR------NVVTHGPGAKLLSRAGLTLHEV----------QSHLDKEGASDLVVELVFKS 1740 (2693)
Q Consensus 1677 ~y~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~e~----------Q~~L~~~GAs~lV~~li~~s 1740 (2693)
.||..+....+....--.--.. .-.+.+.+.+.-+..+++.+|. |.+|.++||++||+.+|+.|
T Consensus 3693 l~fsr~altek~kledd~ly~aya~imaksc~~~eddd~ded~~ksfeekemekqk~lyqqarlhdrgaaemvlq~isas 3772 (5019)
T KOG2243|consen 3693 LLFSRNALTEKCKLEDDFLYMAYADIMAKSCHDEEDDDEDEDKEKSFEEKEMEKQKLLYQQARLHDRGAAEMVLQMISAS 3772 (5019)
T ss_pred HHhhhhhhhhhhccccchHHHHHHHHHHhhhcCcccccchhhhhhchhHHHHHHHHHHHHHHHhhhccHHHHHHHHHHhc
Q ss_pred CCChhhHH-HHHHHHHHHhcCCCHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHhhcccccchhhHhhhccccccc
Q psy827 1741 VNSPSIFV-EAVELGIALLEGGNPIIQKSMYNKLLGGDLSQSFFKVFYDKMKDAQQEIKSTVTVNTSDMAAKAHEDKDQH 1819 (2693)
Q Consensus 1741 ~~~~~if~-e~i~l~iaLL~GGN~~vQ~s~~~~l~~~~~se~FF~~i~~~m~~a~~~ik~~~~~~~~~~~~~~~~~~~~~ 1819 (2693)
+..-.-+. +++.||||+|+|||..||+.++.|++. ++...||+.+...|+.+ +....|..+.++++
T Consensus 3773 kge~~pmv~~tlklgiailnggna~vqqkmldylke-kkd~gffqslaglmqsc-----svldlnaferqnka------- 3839 (5019)
T KOG2243|consen 3773 KGEMGPMVAATLKLGIAILNGGNAGVQQKMLDYLKE-KKDAGFFQSLAGLMQSC-----SVLDLNAFERQNKA------- 3839 (5019)
T ss_pred cCCcchHHHHHHhhceeeecCCcHHHHHHHHHHHHh-hccccHHHHHHHHHhhc-----cccccHHHhhhchh-------
Q ss_pred chhhhhhhhccccCCccc-cHHHHHHHHHhhhhhhhhhhhccCCCCCCCccchhcccCchhHHHHHHHHHhhhccccccc
Q psy827 1820 KDLDKLNKRKIKTNGMIL-TEELREELNQAAFATTQAFAVARSTPQGEDVSNLVLNQGSALEDMLAEKLERQRDREDQNG 1898 (2693)
Q Consensus 1820 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1898 (2693)
+|++| ++| ..-.-.+.-.+
T Consensus 3840 -------------eglgmvtee-----------------------------------------------gtlivre~gek 3859 (5019)
T KOG2243|consen 3840 -------------EGLGMVTEE-----------------------------------------------GTLIVRERGEK 3859 (5019)
T ss_pred -------------cccceeecc-----------------------------------------------ceeeecccccc
Q ss_pred cccchhhHHhHHHHHHHhhhcCChhhHhHhhhC-CCCCcchhHHHHHHHHhhhcccCCCccccchhhhcc----------
Q psy827 1899 LSGKILVMQPVLRFLQLLCENHNRDLQNLLRNQ-NNKSNYNLVSETLMFLDCICGSTTGGLGLLGLYINE---------- 1967 (2693)
Q Consensus 1899 ~~~~i~~~~~ilr~lqllCeghn~~~Qn~lr~Q-~n~~~~nlv~e~~~~l~~~~~stt~~l~ll~~~i~~---------- 1967 (2693)
.-+.-.+.+.+||||||||||||.++|||||.| .|.+.+|++..|++||.++++|+++ +++|.+-
T Consensus 3860 vlq~deft~dlfrflqllceghnsdfqn~lrtq~gn~ttvniiistvdyllr~qesisd----fywyysgkdiide~gq~ 3935 (5019)
T KOG2243|consen 3860 VLQDDEFTCDLFRFLQLLCEGHNSDFQNFLRTQMGNNTTVNIIISTVDYLLRLQESISD----FYWYYSGKDIIDEQGQH 3935 (5019)
T ss_pred hhccchhhHHHHHHHHHHhcccchHHHHHHHHhcCCCceEEEEehhHHHHHHHHHhhhh----heEeecCcchhhhhccc
Q ss_pred ---hhHHHHHHHHHHHhhhhccccCCcccchhccccchhHHHHHHH---HhccCccccchHHH-----HHHHHHHHHHHH
Q psy827 1968 ---YNVALINQTLETLTEYCQGPCHDNQNCIATHESNGLDIITALI---LNDINPLGKTRMDL-----VLELKNNASKLL 2036 (2693)
Q Consensus 1968 ---~~~~~~~q~ldTLtE~~QGPC~eNQ~~ia~~~s~~~dii~~li---~~~i~~l~k~~~dl-----v~~Lk~~~~kLL 2036 (2693)
+.+.+.+|+|.|||||+||||.+||+.+|. |..||.++..+ .+....+....-.. .+.|.......|
T Consensus 3936 nfskai~v~kqifnslteyiqgpc~gnqqslah--srlwdavvgflhvfa~mqmklsqdssqiellkelldl~kdmvvml 4013 (5019)
T KOG2243|consen 3936 NFSKAIAVAKQIFNSLTEYIQGPCIGNQQSLAH--SRLWDAVVGFLHVFAHMQMKLSQDSSQIELLKELLDLLKDMVVML 4013 (5019)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCccCchHHHHH--HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHhhcC-CchhHHHHHhhC-----ChHHHHHHHHHHHhhccccCCCCCCCCCCCCCCC--------------------
Q psy827 2037 LAIMESRG-DSENAERILYNM-----NPKQLVDVACRAFHQETLDDGVDSDDSSSSEGDE-------------------- 2090 (2693)
Q Consensus 2037 LslmE~~~-d~~~~~rIl~~l-----~~~~L~~~~~~~y~~~~~~~~~~~~~~~~~~~~~-------------------- 2090 (2693)
||++||+- +..+.+++...+ +.+.++++.-...........+.+.+.+.+.+.-
T Consensus 4014 lsllegnvvngtigkqmvd~lvess~nvemilkffdmflklkdltssdtfkeydpdgkgiiskkdf~kame~~k~ytqse 4093 (5019)
T KOG2243|consen 4014 LSLLEGNVVNGTIGKQMVDMLVESSNNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGIISKKDFHKAMEGHKHYTQSE 4093 (5019)
T ss_pred HHHhhCCcccchhHHHHHHHHHHcCccHHHHHHHHHHHHHHhhccccccchhcCCCCCccccHHHHHHHHhccccchhHH
Q ss_pred -------------------------CCCcccchhhHHHHHHHHHhhhH---HHHHhcCCCCCCCChhHHHHHHHHhhccc
Q psy827 2091 -------------------------GVSPKEVGHNIYILCHQLAQHNK---DLATLLKPCGTYTDPKMIQALEYYASHTA 2142 (2693)
Q Consensus 2091 -------------------------~~~~~evg~niyiL~~~l~~~n~---~l~~~l~~~~~~~~~~~~~Al~f~~~~Ta 2142 (2693)
....+.+|||+-.|+.+|++|-+ .++..+++.. ..++||.-..|
T Consensus 4094 ~dfllscae~dend~~~y~dfv~rfhepakdigfnvavlltnlsehmpndsrlk~~ld~ae--------svlnyfep~lg 4165 (5019)
T KOG2243|consen 4094 IDFLLSCAEADENDMFDYEDFVDRFHEPAKDIGFNVAVLLTNLSEHMPNDSRLKCFLDLAE--------SVLNYFEPFLG 4165 (5019)
T ss_pred HHHHHHhhccCccccccHHHHHHHhcCchhhcCcchhhhhhhhHhhCCCchhHHHHHhHHH--------HHHHhhhhhcc
Q ss_pred eEEEEEcCCeeEEEEecccccc-----cCCcHHHHHHhh-hccccCCccccHHHHHHhhHHHHHHHH-------------
Q psy827 2143 QIEIVRQDRTLEQIVFPIPEIC-----EYLTEDTKSKVY-QTAERDDQGSKVSDFFERTEDMFSEMK------------- 2203 (2693)
Q Consensus 2143 ~IEIvR~d~~LE~I~Fpi~~~c-----~~L~~e~K~~f~-~~v~R~s~~sKv~~l~~~~~~l~~em~------------- 2203 (2693)
+|||.-.-+.+|||||-|..-. +---+|+|.+|+ .-|+-...+.|..-|+..+++-|.||.
T Consensus 4166 rieimg~akkiervyfeisessrtqwekpqvkeskrqfifdvvneggekekmelfvnfcedtifemqlaaqisesd~~dr 4245 (5019)
T KOG2243|consen 4166 RIEIMGGAKKIERVYFEISESSRTQWEKPQVKESKRQFIFDVVNEGGEKEKMELFVNFCEDTIFEMQLAAQISESDLADR 4245 (5019)
T ss_pred eeeeeccceeeeEEEEEecccccccccccchhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHhccccccccC
Q ss_pred --------------------------------------------------------------------------------
Q psy827 2204 -------------------------------------------------------------------------------- 2203 (2693)
Q Consensus 2204 -------------------------------------------------------------------------------- 2203 (2693)
T Consensus 4246 pe~~~~~edssyvle~~~~eee~~~l~~fs~~~~~~a~~a~k~ni~~~lk~~slk~lkkq~k~vkkmt~kdlv~~~fs~~ 4325 (5019)
T KOG2243|consen 4246 PEEEAEDEDSSYVLEIAGEEEEDGRLAFFSALAFAMACAALKRNILDFLKMASLKNLKKQMKKVKKMTAKDLVKAFFSFF 4325 (5019)
T ss_pred chhhhcccchhhHHhhcCccccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q ss_pred --------------------------------------------------------------------------------
Q psy827 2204 -------------------------------------------------------------------------------- 2203 (2693)
Q Consensus 2204 -------------------------------------------------------------------------------- 2203 (2693)
T Consensus 4326 w~if~~l~~~~~si~~g~f~ii~s~~~gg~lvegak~ikv~~il~~mpdptq~~i~~d~~e~er~~~~~~~~s~dl~~~~ 4405 (5019)
T KOG2243|consen 4326 WMIFMGLFHFLASIFGGFFQIICSLLFGGGLVEGAKKIKVAEILADMPDPTQDEIHDDGEEAERAELEAAGISEDLTDFI 4405 (5019)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhcchhhhHHHHhccCCCCccccccCchhhhhhhhhhccCchHHHHHHH
Q ss_pred --------------------------------------------------------------------------------
Q psy827 2204 -------------------------------------------------------------------------------- 2203 (2693)
Q Consensus 2204 -------------------------------------------------------------------------------- 2203 (2693)
T Consensus 4406 ~~e~~dsdilsdifgl~~~k~~g~~kliph~p~~gl~dl~~~~g~~~p~~~e~~~ekk~kaqaae~~~~~~~e~k~e~ek 4485 (5019)
T KOG2243|consen 4406 EGEKEDSDILSDIFGLDHKKEEGQLKLIPHGPEAGLGDLMEIIGKDEPETLEKFQEKKAKAQAAEEEAAEEAEGKSEPEK 4485 (5019)
T ss_pred hccccchhHHHHHhcccccccCCceeccCCCCccchhhHHhccCCCCChHHHHHHHHHHhhhhhHHHhhhhhhcCCCccc
Q ss_pred -----------------------------------------------------HHHHHhcCCchHHHHHhHHHHHHHHHH
Q psy827 2204 -----------------------------------------------------WQKKLRGQPALFWVSSYMSVWSNILFN 2230 (2693)
Q Consensus 2204 -----------------------------------------------------~~~kL~~~~~l~~~s~~~~lw~~i~f~ 2230 (2693)
+|.|| +..|+++.--.+-++.+
T Consensus 4486 ad~edgekedk~keeeqaeylw~~~~kk~k~~~~~k~~~pe~~~a~f~k~i~~yq~kl-----l~y~arnfynlr~lalf 4560 (5019)
T KOG2243|consen 4486 ADGEDGEKEDKAKEEEQAEYLWDEGKKKKKQLCGHKVEEPEAFEAAFFKGIEAYQQKL-----LHYFARNFYNLRFLALF 4560 (5019)
T ss_pred cccccccchhhhhhHHHHHHHHhHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHH-----HHHHHHhhhhHHHHHHH
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCc-----------------------------ccccccccchhhhHHHHHHHHHHHHHh
Q psy827 2231 CAVLINLIVAIFYPFPGNYPSQPA-----------------------------LFWVSSYMSVWSNILFNCAVLINLIVA 2281 (2693)
Q Consensus 2231 lav~INlii~~fy~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~i~~~~~~~inl~~~ 2281 (2693)
.|+.||.|.+ ||........... +-....|..-+..++.++-.+|.++.+
T Consensus 4561 vafainfill-fykvs~~~~~e~~elptrs~~~n~~~s~~d~~s~~~~~v~~vleessgym~ptlr~laiihtiis~~ci 4639 (5019)
T KOG2243|consen 4561 VAFAINFILL-FYKVSEEPLEEEKELPTRSDSANAKNSFLDEESEEEAAVFFVLEESSGYMAPTLRALAIIHTIISFFCI 4639 (5019)
T ss_pred HHHHHHHHHh-heeccccchhhcccCCcccchhhhhhccccchhhhhhheeeeeecccCcccHHHHHHHHHHHHHHHHHH
Q ss_pred hccc-------------------------------------CCCCCCCCCcchhhHHHHHHHHHhhhcc-----------
Q psy827 2282 IFYP-------------------------------------FPGNYPSLSSHFSGFIWSVMLISGVTVM----------- 2313 (2693)
Q Consensus 2282 ~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 2313 (2693)
+-|- -|.....-.+.|....|--+.--.++-.
T Consensus 4640 igyyclkvplvifkrekeiarklefdglyiteqpseddikgqwdrlvint~sfpnnywdkfvkrkv~~kygd~yg~dria 4719 (5019)
T KOG2243|consen 4640 IGYYCLKVPLVIFKREKEIARKLEFDGLYITEQPSEDDIKGQWDRLVINTPSFPNNYWDKFVKRKVIDKYGDFYGADRIA 4719 (5019)
T ss_pred HhhHhhccceEEEehHHHHHHhccccceEeecCCCccccccccceEEecCCCCCchHHHHHHHHHHHHhhhhhhhHHHHH
Q ss_pred -----------ccccccchhHHHHHHHHHHHHhcCCCcchhhhhhhhheeeeeeeeeecccccchhhhhhhhccChhHHH
Q psy827 2314 -----------YVPRESGIRTLVVSTILRLIYSMGPEPTLWLLGTLTVVMKGIHLISIMGNQGTFTKQINQIFMDPEILY 2382 (2693)
Q Consensus 2314 -----------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~d~~~~y 2382 (2693)
+.+....-.+-..|.+...+-++......|.+|. +++|..++|
T Consensus 4720 ellgldk~aldfs~~~ek~k~~~~ssl~a~l~sid~ky~~wklgv--------------------------vftdnsfly 4773 (5019)
T KOG2243|consen 4720 ELLGLDKAALDFSDAEEKKKAEAASSLSAVLNSIDMKYHIWKLGV--------------------------VFTDNSFLY 4773 (5019)
T ss_pred HHhCCccccccCCchhhhccchhhhHHHHHHhhhhhhheeeeeeE--------------------------EEecCchHH
Q ss_pred HHHHHHHHHhhhccchhhHHhhHHHhhcchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhcccccc------
Q psy827 2383 HLSYVMFCVLGLCMHPFFYSVLLLDVVYREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKDDFL------ 2456 (2693)
Q Consensus 2383 ~~~y~~~s~lg~~~~~~f~~~~L~di~~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~~f~------ 2456 (2693)
..+|+.+|++|- ++.|||+.||+||...+.||+.++.|||.||+||++|.-|..+++|+|++++|.||+..|.
T Consensus 4774 lawy~tmsvlgh-ynnfffaahlldiamgfktlrtilssvthngkqlvltvgllavvvylytvvafnffrkfynksed~d 4852 (5019)
T KOG2243|consen 4774 LAWYMTMSVLGH-YNNFFFAAHLLDIAMGFKTLRTILSSVTHNGKQLVLTVGLLAVVVYLYTVVAFNFFRKFYNKSEDDD 4852 (5019)
T ss_pred HHHHHHHHHHhc-cchHHHHHHHHHHHHhHHHHHHHHHHhccCCeEEEEeehhHHHHHHHHHHHHHHHHHHHhcccccCC
Q ss_pred ------------------------------------ccccchhhhhhhHHHHHHHHHHHHHHHHhhhccccccHHHHHHH
Q psy827 2457 ------------------------------------EPLFVARVIYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQQK 2500 (2693)
Q Consensus 2457 ------------------------------------~~~~~~r~~~d~~f~~~v~ii~lnii~GiIiDtF~~lR~~~~~~ 2500 (2693)
+++-+.|++||.+|||+|++|++.||.|.|||+||+|||++++.
T Consensus 4853 ~pdmkcddmltcylfhmyvgvragggigdeiedpagd~yeiyriifditffffvivillaiiqgliidafgelrdqqeqv 4932 (5019)
T KOG2243|consen 4853 EPDMKCDDMLTCYLFHMYVGVRAGGGIGDEIEDPAGDEYEIYRIIFDITFFFFVIVILLAIIQGLIIDAFGELRDQQEQV 4932 (5019)
T ss_pred CCCccchhhHHHHhhheeeeeecCCcccccccCCCCCcceeeeeeehhhHHHHHHHHHHHHHHHHhHHHHHhhHhHHHHH
Q ss_pred HHHhhccccccccccccccccCcchhhhhhhccccchhhhhhhhhcccCCCCCCchhHHHHHHhhcCCCcceeccccc
Q psy827 2501 ELILKNTCFICGLNRSAFDNKTVSFEEHITCEHNMYHYLYFIVLVKVKDPTEFTGPESYVYAMVKDRNLDWFPRLRAM 2578 (2693)
Q Consensus 2501 ~~d~~~~CfICg~~r~~fd~~~~~f~~Hi~~eHn~wnY~~f~~~l~~K~~~e~tg~Esyv~~~~~~~~~~wfP~~~a~ 2578 (2693)
.+|++++||||||..+.||....||+.|.-.|||+-||+||+.||-.||+||+||.||||+.|.+++-++|||...+.
T Consensus 4933 kedmetkcficgigndyfdt~phgfethtlqehnlanylfflmylinkdetehtgqesyvwkmyqercwdffpagdcf 5010 (5019)
T KOG2243|consen 4933 KEDMETKCFICGIGNDYFDTTPHGFETHTLQEHNLANYLFFLMYLINKDETEHTGQESYVWKMYQERCWDFFPAGDCF 5010 (5019)
T ss_pred HhhhhcceEEeccccccccCCCCcccccchhhhhHHHHHHHHHHHhcccccccccchhHHHHHHHHHHHhhCCchhhH
No 3
>PF08709 Ins145_P3_rec: Inositol 1,4,5-trisphosphate/ryanodine receptor; InterPro: IPR014821 This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N-terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-gated receptors and voltage-gated Ca2+ channels on the plasma membrane, thus allowing the endoplasmic reticulum to discriminate between different types of neuronal activity []. ; PDB: 3UJ4_B 3UJ0_B 3T8S_B 3JRR_B 1XZZ_A 3ILA_B 3HSM_A 2XOA_A 3IM6_A 3IM7_A ....
Probab=100.00 E-value=1.8e-43 Score=415.23 Aligned_cols=211 Identities=46% Similarity=0.722 Sum_probs=173.6
Q ss_pred CCCccccCCEEEEEecCccceEEEecCCCCCCeEEecCCCCCCCCCCccccceEEEecCcccHHHHHHHHHHHhccCCcc
Q psy827 7 SASFLHLGDIVSLFAEGNVCGFLSTLGLVDDRTVVCPDAGDLANAPKKFRDCLFKICPMNRYSAQKQFWKAAKQSASSTT 86 (2693)
Q Consensus 7 ~~~~L~~GDiVsL~~e~~~~gflst~G~~~~~~~v~~~~g~~~n~p~~frdclFkI~P~~~y~Aqk~~~k~~k~~~~~~~ 86 (2693)
++++|||||+|+|+++++.+|||+|+||++++|++++.+++..++|++|++|||+|+|+++|+||++++++.+.+.....
T Consensus 2 ~~~~L~~Gd~V~L~~~~~~~~~l~a~Gf~~~~~~l~~~~~~~~~~p~~f~~clF~I~p~~~~~a~~~~~~~~~~~~~~~~ 81 (214)
T PF08709_consen 2 NVQPLRYGDIVSLSCEDQDNGFLSAEGFGNRKCFLEPFSGDKNNPPKDFRDCLFQICPALSYRAQQELLKEQQRKQQQEK 81 (214)
T ss_dssp ---B-BTT-EEEEEEESSSCEEEEESCSSC-BEEEEECCTTSSS-STTGGGGEEEEEEEEEHHHHHHHHHCCH-------
T ss_pred CccccccCcEEEEEEeCCCCeEEEEecccCCcEEEEECCCcccCCccchheeEEEEcCCccHHHHHHHHHhhhhcccccc
Confidence 47899999999999999888999999999999999999998888888999999999999999999999987432221111
Q ss_pred hHHHHHHHHHHHHHhhhhcHHHHHHhcCcEeeeccEEEEeecCCCceEEEcCccchhhccCceEEEeecCCC-cceEEEE
Q psy827 87 DAVLLKRLHHAAEIEKKQNESENKKLLGMVVQYGSVVQLLHLKSNKFLTVNKRLPALLEKNAMRVYLDANGN-EGSWFYI 165 (2693)
Q Consensus 87 ~~~~l~~Lq~~ae~E~~~N~~e~~k~~G~~V~YG~~IQL~Hv~S~kyLt~~~~~~a~~Ek~a~~V~L~~~~s-e~s~F~I 165 (2693)
...++|+.|.++| |++|+|||+|||+|++|+|||||+++.+|..|++||+|+|+++++ ++|||+|
T Consensus 82 ------~~~~~a~~~~~~~--------g~~v~YGq~IQL~H~~S~kyL~~~~~~~s~~e~~~~~v~L~~~~~~e~s~F~i 147 (214)
T PF08709_consen 82 ------LSDQAAQIEKEQN--------GTPVLYGQAIQLLHVKSNKYLTCNSTEPSEYEKNNFKVSLQEFSSGENSWFRI 147 (214)
T ss_dssp ------HHHHHHHHHHHHH--------T-B-BTTEEEEEEETTTTEEEEEEEEEESSSSTTSEEEEEESSSSSGGGEEEE
T ss_pred ------hhhhhhhhhcccC--------CCEEEecceEEEeEeCccEEEEEeCCCCCcccccceEEEeccCCCcccEEEEE
Confidence 1116777788777 999999999999999999999999999899999999999999999 9999999
Q ss_pred ecCcccccCCCeEeeCCEEEEEEccCCCceeeeeccccCCCCCCceeEEeecCCceeEEEEcccccc
Q psy827 166 LPFYKLRSTGDNVVVGDKVIMNPVNAGQQVLHVAANYELPDNPGCKEVNVVNSSTSWKVTLFMEHRE 232 (2693)
Q Consensus 166 ~P~~K~r~eGd~V~~gD~ViL~~v~~~~~~LH~s~~~~~p~~~~~~EVn~sd~~T~WkI~l~~~~~~ 232 (2693)
+|+||+|++||+|++||+|+|.+++++ +|||+++.....+.+++.|||+++++|.|+|.+|+++.+
T Consensus 148 ~P~~k~r~~Gd~V~~gD~i~l~~~~~~-~~Lh~s~~~~~~~~~~~~eVn~~~~~T~w~i~~~~~~~~ 213 (214)
T PF08709_consen 148 HPAYKQRSEGDPVRYGDQIILISVSTE-QYLHVSSNKSLSDNKGCKEVNASFQQTSWKINPFMSYSE 213 (214)
T ss_dssp EESSTTS-TTSB-BTT-EEEEEETTT--SEEEEEEEEEESSSSSCEEEEESSS--EEEEEEEE-GGG
T ss_pred EcchheEcCCCeeeeCCEEEEEECCCC-CcccccCccccccCCCceEEEEEccccceEEEEEeecCC
Confidence 999999999999999999999999775 559987766777788899999999999999999998765
No 4
>PF01365 RYDR_ITPR: RIH domain; InterPro: IPR000699 Ryanodine and Inositol 1,4,5-trisphosphate (IP3) receptors are intracellular Ca2+-release channels. They become activated upon binding of their respective ligands, Ca2+ and IP3, opening an intrgral Ca2+ channel. Ryanodine receptor activation is a key component of muscular contraction, their activation allowing release of Ca2+ from the sarcoplasmic reticulum. Mutations in the ryanodine receptor lead to malignant hyperthermia susceptibility the and central core disease of muscle.; GO: 0005262 calcium channel activity, 0070588 calcium ion transmembrane transport, 0016020 membrane; PDB: 1N4K_A 2XOA_A 3UJ0_B 3UJ4_A 3T8S_A.
Probab=99.95 E-value=2.2e-28 Score=288.30 Aligned_cols=197 Identities=42% Similarity=0.713 Sum_probs=100.7
Q ss_pred HHHHHHHHHhhhcCcccccchhhhhhhhcCCCChHHHHHHHhhchHHHHHHHhcccccccccCCCCcccccccCCCCCCc
Q psy827 460 VTSLLQDIVYFIAGLENEQNKSEALELSVVNPNRDRQKLLREQYILKQLFKILQAPFLEIVEGEGPFLRIEELNDPKNAP 539 (2693)
Q Consensus 460 v~~~L~dLi~F~~~~e~~~n~~~~L~~~~~~pnr~RQkLLREq~iL~lL~~iL~~pF~~~~~~~~~~l~~~el~d~~~~~ 539 (2693)
|+++|+||+.|+.+.++... ..+++..+.|++.||+|||++|++++++++|..||... .+..+ + +.+++.+.
T Consensus 2 v~~~l~~Li~f~~~~~~~~~--~~~~~~~~~~~~~rQ~llrnl~i~~~v~~~L~~~~~~~-~~~~~----~-~~~~~~~~ 73 (207)
T PF01365_consen 2 VLKILRDLIKFCMGSEEEDQ--HLLKQRNGQPNRERQKLLRNLGIHELVLDLLKNPFDQF-QGDFK----D-LGDQKDSS 73 (207)
T ss_dssp HHHHHHHHHHHHTTTS--SS---SHHCCCCHHHHHHHHHHHHTTHHHHHHHHHHHHCTS---------------STGGHC
T ss_pred HHHHHHHHHhHhCCCCcccc--hHHHHhcCCcchhhHHHHHHHHHHHHHHHHhhhhhhcc-cchhh----h-hcchhccH
Confidence 68899999999998754443 33444567899999999999999999999999999754 22221 3 66777788
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhHHHHHHHHH-----HHHHHhcCchhhHHHHHHHHhccHHHHHHhhhHHHHHHHHHHHh
Q psy827 540 YKYMFRLCYRILRLSQQDYRKNQEYIAKHFG-----FMQKQIGYDILAEDTITALLHNNRKLLEKHITAAEIETFVGLVR 614 (2693)
Q Consensus 540 ~k~i~~l~Y~LL~~~~~~NrkNq~yiak~i~-----~~q~QIgy~~~AedtIteLl~nN~~LLek~I~e~~I~~fI~Ll~ 614 (2693)
+..+++.||++|+.+|++|++||.|+++|++ +++.+++++.+++|++++|++||.+|+++ +++.+|+.||++++
T Consensus 74 ~~~l~~~~~~lL~~f~~~n~~NQ~~l~~~~~~l~~~~~~~~~~~~~~~~d~l~~i~~dN~~L~~~-i~e~~I~~~i~ll~ 152 (207)
T PF01365_consen 74 FKELFRLCYRLLRQFCRGNRENQKYLFKHLDFLISIFMQLQIGYGLGALDVLTEIFRDNPELCES-ISEEHIEKFIELLR 152 (207)
T ss_dssp HHHHHHHHHHHHHHHHTT-HHHHHHHHHHHH-----HHCCCH-TTHHHHHHHHHHHTT----------------------
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhHHHHHHHHhhccCCchHHHHHHHHHHCcHHHHHH-hhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 77778899999999999999999999997 78888999999999
Q ss_pred hccccCchhHHHHHHHHhhcCCccccccHHHHHHhhcCCCCccceeeccccCC
Q psy827 615 KNMHSWQSRFLDYLSDLCISNKKAIAITQELICKSVLSSRNADILIETGMTKP 667 (2693)
Q Consensus 615 kn~~~r~~~~LdfLssLCv~ng~aI~~NQelIck~lL~~~n~dll~~T~l~~~ 667 (2693)
+ ++|+|+||+||+++|+|+|+||+.||++||+.++.++++|+++.|+++.+
T Consensus 153 ~--~gr~~~~L~~L~~lc~~~g~pI~~nQ~lI~~~ll~~~~~dll~~~~~~~~ 203 (207)
T PF01365_consen 153 K--HGRQPRYLDFLSSLCVCNGNPIPENQNLICQELLLEGEADLLVFTNDRKP 203 (207)
T ss_dssp -----------------------------------------------------
T ss_pred H--cCCChHHHHHHhhhcccCCcCCHHHHHHHHHHHcCCCCccEEEEeecccc
Confidence 8 46999999999999999999999999999999998888899999998765
No 5
>PF08454 RIH_assoc: RyR and IP3R Homology associated; InterPro: IPR013662 This eukaryotic domain is found in ryanodine receptors (RyR) and inositol 1, 4, 5-trisphosphate receptors (IP3R) which together form a superfamily of homotetrameric ligand-gated intracellular Ca2+ channels []. There seems to be no known function for this domain []. Also see the IP3-binding domain IPR000699 from INTERPRO and IPR003608 from INTERPRO.
Probab=99.93 E-value=1.5e-26 Score=241.45 Aligned_cols=103 Identities=52% Similarity=0.781 Sum_probs=94.0
Q ss_pred cchhhHHhHHHHHHHhhhcCChhhHhHhhhCC-CCCcchhHHHHHHHHhhhcccCCCccccchhhhcchhHHHHHHHHHH
Q psy827 1901 GKILVMQPVLRFLQLLCENHNRDLQNLLRNQN-NKSNYNLVSETLMFLDCICGSTTGGLGLLGLYINEYNVALINQTLET 1979 (2693)
Q Consensus 1901 ~~i~~~~~ilr~lqllCeghn~~~Qn~lr~Q~-n~~~~nlv~e~~~~l~~~~~stt~~l~ll~~~i~~~~~~~~~q~ldT 1979 (2693)
.+..+++.+||||||||||||.+||||||.|+ |++|||+|.+|++||..+|+ .+.++++++++++.|||||
T Consensus 5 ~~~~~~~~ilr~LQLlCEghn~~lQnylR~Q~~~~~s~nlV~~~~~ll~~l~~--------~~~~~~~~~~~~~~q~~~t 76 (109)
T PF08454_consen 5 QDMEIIQRILRFLQLLCEGHNLDLQNYLRQQPNNKNSYNLVSETVDLLDSLQE--------FGKDINSDNIELIIQCFDT 76 (109)
T ss_pred HHHHHHHHHHHHHHHHHCcCCHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHH--------HHHHhhHHHHHHHHHHHHH
Confidence 34668999999999999999999999999996 69999999999999988662 5789999999999999999
Q ss_pred HhhhhccccCCcccchhccccchhHHHHHHHHhc
Q psy827 1980 LTEYCQGPCHDNQNCIATHESNGLDIITALILND 2013 (2693)
Q Consensus 1980 LtE~~QGPC~eNQ~~ia~~~s~~~dii~~li~~~ 2013 (2693)
|||||||||++||.+++ +|+++|++..++.++
T Consensus 77 L~E~iQGPC~eNQ~~l~--~s~~~~~i~~lL~~~ 108 (109)
T PF08454_consen 77 LTEFIQGPCIENQIALA--NSKFLDIINDLLSKE 108 (109)
T ss_pred HHHHHcCCCHHhHHHHH--HccHHHHHHHHHhhc
Confidence 99999999999999888 589999999887654
No 6
>KOG3533|consensus
Probab=99.88 E-value=3.7e-23 Score=263.15 Aligned_cols=171 Identities=42% Similarity=0.697 Sum_probs=140.1
Q ss_pred HHHHHhhcchHHHHHHH--HHHhhhcCCcEEEEecCchhHHHHHHHHHHhhhhccCCCcccccccceeEEEecchhHHHH
Q psy827 1040 LHLLFRHFSQRQEVLQA--FKQLVNAGEDVLVFYNDKSSFQQFIAMMQNQRTRMDESSPLRSKTIQLVQLLVSDADVESY 1117 (2693)
Q Consensus 1040 L~LL~R~FsQr~Ell~~--l~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vQLLvs~~dv~~y 1117 (2693)
|+-+.+-+++--+=+|. ..+|+|+|+||+|||||+|||++|++||+++|+|++.+|..
T Consensus 1338 Lqt~Vkae~k~ikkcQdmVm~El~nagddVlvfYnD~aSf~~l~~MM~~erdr~~~~s~~-------------------- 1397 (2706)
T KOG3533|consen 1338 LQTLVKAEGKEIKKCQDMVMNELCNAGDDVLVFYNDNASFEELEAMMKDERDRKGRSSSR-------------------- 1397 (2706)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHhcCCCcEEEEecCcccHHHHHHHHHHHHhcccccccC--------------------
Confidence 33344444443333333 33599999999999999999999999999999999865533
Q ss_pred HHHHHhHHHHHHhhhhhhhhhhhccCCcccccccCCCCCCCCccccchhhHHHHHHHHhhhhccCCccceeeecccCCCc
Q psy827 1118 KQIKSDLDVLRQSVEKSELWVYKSKNGEEHGKKHSKAGAEDDDDAGKETLYHIELVKLLACCTMGKNVYTEIKCHSLLPL 1197 (2693)
Q Consensus 1118 ~~ik~~l~~Lr~~vekSElWv~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 1197 (2693)
++|.||+++++|||+||+|||+||||||.|++|+
T Consensus 1398 ----------------------------------------------spL~YHI~LV~LLA~Ct~GKNvyTEiKCnsllpl 1431 (2706)
T KOG3533|consen 1398 ----------------------------------------------SPLKYHIELVRLLAMCTEGKNVYTEIKCNSLLPL 1431 (2706)
T ss_pred ----------------------------------------------CchhhHHHHHHHHHHHhcCCccceeeeecccCCh
Confidence 2568999999999999999999999999999999
Q ss_pred cchhccccCCCCccccccc---------cccCCCCCCCCchhhHHHHHHHHHHHHHhhhcccCCCCCCCCCchhhhhHHH
Q psy827 1198 DDIVAMVSHPDCIPEQGSA---------IDLDIGPPIHADQAEEYKKIQQILIRMNKLCISRATPLSPVKPRKHEQRLLR 1268 (2693)
Q Consensus 1198 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~y~~~~~~l~~~~~~c~~~~~~~~~~k~~~~~Q~llr 1268 (2693)
||||.+|+|++|+|+++.| +||+++|+++|+++|+|++|.+++.+|.++|.. +.+++....|.
T Consensus 1432 ddIVrVVth~dCipEVK~aYvnflnHCYiDTevEMKeiYtsnh~w~lfenflvDi~r~~~~--------~~~~~ad~tLe 1503 (2706)
T KOG3533|consen 1432 DDIVRVVTHKDCIPEVKTAYVNFLNHCYIDTEVEMKEIYTSNHVWHLFENFLVDIRRLCVE--------KLTGAADATLE 1503 (2706)
T ss_pred hHheeeechhhhhHHHHHHHHHHHHHhhcccHHHHHHHHhhhhHHHHHHHHHHHHHHHhcc--------cccccchhHHH
Confidence 9999999999999999987 999999999999999999999999999999975 23556666777
Q ss_pred hhcchhhhhhh----ccCccC
Q psy827 1269 NVGVHTIVLDL----LQVPYD 1285 (2693)
Q Consensus 1269 n~g~h~~vl~l----l~~~~~ 1285 (2693)
.+ |...|.++ ...||.
T Consensus 1504 ky-v~~~V~~~l~~FF~sPfS 1523 (2706)
T KOG3533|consen 1504 KY-VCHTVTEVLIKFFESPFS 1523 (2706)
T ss_pred HH-HHHHHHHHHHHHhcCccc
Confidence 66 33344444 356764
No 7
>PF01365 RYDR_ITPR: RIH domain; InterPro: IPR000699 Ryanodine and Inositol 1,4,5-trisphosphate (IP3) receptors are intracellular Ca2+-release channels. They become activated upon binding of their respective ligands, Ca2+ and IP3, opening an intrgral Ca2+ channel. Ryanodine receptor activation is a key component of muscular contraction, their activation allowing release of Ca2+ from the sarcoplasmic reticulum. Mutations in the ryanodine receptor lead to malignant hyperthermia susceptibility the and central core disease of muscle.; GO: 0005262 calcium channel activity, 0070588 calcium ion transmembrane transport, 0016020 membrane; PDB: 1N4K_A 2XOA_A 3UJ0_B 3UJ4_A 3T8S_A.
Probab=99.86 E-value=2.4e-22 Score=237.21 Aligned_cols=159 Identities=35% Similarity=0.688 Sum_probs=85.8
Q ss_pred HHHHHHHHhhhcccCCCC------CCCCCchhhhhHHHhhcchhhhhhhccCccCch----------hhhHHHHHHHHHH
Q psy827 1237 QQILIRMNKLCISRATPL------SPVKPRKHEQRLLRNVGVHTIVLDLLQVPYDMK----------EDIRMNELMRLAH 1300 (2693)
Q Consensus 1237 ~~~l~~~~~~c~~~~~~~------~~~k~~~~~Q~llrn~g~h~~vl~ll~~~~~~~----------~d~~m~el~~~~~ 1300 (2693)
..++.++-..|....... ...+|++.+|+||||+|+|+.|+++|+.|++.. .+..+.+++..||
T Consensus 3 ~~~l~~Li~f~~~~~~~~~~~~~~~~~~~~~~rQ~llrnl~i~~~v~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (207)
T PF01365_consen 3 LKILRDLIKFCMGSEEEDQHLLKQRNGQPNRERQKLLRNLGIHELVLDLLKNPFDQFQGDFKDLGDQKDSSFKELFRLCY 82 (207)
T ss_dssp HHHHHHHHHHHTTTS--SS-SHHCCCCHHHHHHHHHHHHTTHHHHHHHHHHHHCTS---------STGGHCHHHHHHHHH
T ss_pred HHHHHHHHhHhCCCCcccchHHHHhcCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccchhhhhcchhccHHHHHHHHHH
Confidence 456777777886543222 245789999999999999999999999887654 5678899999999
Q ss_pred HHHHHHhccChhhHHHHHHhhh-----hh---hccCchHHHHHHHHhhccHHHhhhhhHHHHHHHHHHHHhhCccchhHH
Q psy827 1301 QFLQNFCLGNQQNQVLLHKHLD-----LF---LNPGIREAQTVCSVFQDNSNLCNEVNEKVIQHFVHCIETHGRHVQYLK 1372 (2693)
Q Consensus 1301 ~fL~~Fc~~N~~NQ~lL~~~l~-----~f---l~~~i~e~~~l~~If~~N~~Lc~~v~e~~i~~~v~~i~~~gr~~~yL~ 1372 (2693)
.||+.||++|++||..|++|++ ++ ...|++.+++++|||+||++||.++++++|++|+++|++|||+++||+
T Consensus 83 ~lL~~f~~~n~~NQ~~l~~~~~~l~~~~~~~~~~~~~~~~d~l~~i~~dN~~L~~~i~e~~I~~~i~ll~~~gr~~~~L~ 162 (207)
T PF01365_consen 83 RLLRQFCRGNRENQKYLFKHLDFLISIFMQLQIGYGLGALDVLTEIFRDNPELCESISEEHIEKFIELLRKHGRQPRYLD 162 (207)
T ss_dssp HHHHHHHTT-HHHHHHHHHHHH-----HHCCCH-TTHHHHHHHHHHHTT-------------------------------
T ss_pred HHHHHHHHhCHHHHHHHHHHHhHHHHHHHHhhccCCchHHHHHHHHHHCcHHHHHHhhHHHHHHHHHHHHHcCCChHHHH
Confidence 9999999999999999999999 33 246788999999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhhchHHhhhHHHHH
Q psy827 1373 FFQTIVKAEDQFIRKCQDMVMQE 1395 (2693)
Q Consensus 1373 fl~tivk~~~~~i~~~Q~~V~~~ 1395 (2693)
||.+|++++|.||+++|++|+++
T Consensus 163 ~L~~lc~~~g~pI~~nQ~lI~~~ 185 (207)
T PF01365_consen 163 FLSSLCVCNGNPIPENQNLICQE 185 (207)
T ss_dssp -----------------------
T ss_pred HHhhhcccCCcCCHHHHHHHHHH
Confidence 99999999999999999999964
No 8
>PF02815 MIR: MIR domain; InterPro: IPR003608 The MIR domain is named after three of the proteins in which it occurs: protein Mannosyltransferase (2.4.1.109 from EC), Inositol 1,4,5-trisphosphate receptor (IP3R) and Ryanodine receptor (RyR). MIR domains have also been found in eukaryotic stromal cell-derived factor 2 (SDF-2) and in Chlamydia trachomatis protein CT153. The MIR domain may have a ligand transferase function. This domain has a closed beta-barrel structure with a hairpin triplet, and has an internal pseudo-threefold symmetry. The MIR motifs that make up the MIR domain consist of ~50 residues and are often found in multiple copies. Inositol 1,4,5-trisphosphate (InsP3) is an intracellular second messenger that transduces growth factor and neurotransmitter signals. InsP3 mediates the release of Ca2+ from intracellular stores by binding to specific Ca2+ channel-coupled receptors. Ryanodine receptors are involved in communication between transverse-tubules and the sarcoplamic reticulum of cardiac and skeletal muscle. The proteins function as a Ca2+-release channels following depolarisation of transverse-tubules []. The function is modulated by Ca2+, Mg2+, ATP and calmodulin. Deficiency in the ryanodine receptor may be the cause of malignant hyperthermia (MH) and of central core disease of muscle (CCD) []. protein O-mannosyltransferases transfer mannose from DOL-P-mannose to ser or thr residues on proteins.; GO: 0016020 membrane; PDB: 1T9F_A 3UJ4_B 3UJ0_B 3T8S_B 3MAL_B 2XOA_A 1N4K_A.
Probab=99.73 E-value=1.1e-17 Score=195.06 Aligned_cols=157 Identities=31% Similarity=0.521 Sum_probs=123.5
Q ss_pred CccccCCEEEEEecCCCccccccccccccceeEEeeccCCCCCCCCCCCcEEEEEeecCCCCCCCCccccceeEEEccCC
Q psy827 236 EILKGGDVVRLFHAEQEKFLTMDEYKKKQHVFLRTTGRTSATSATSSKALWEIEVVQHDPCRGGAGHWNCLFRFKHLATG 315 (2693)
Q Consensus 236 ~~Lk~GDVIRLfH~E~~~~Lt~~~~~~~~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~~Gg~v~w~~~fRLKHl~TG 315 (2693)
++|.+||++|++|++++.+++++....... +++.++++.++.++++++||+||.+..+++.||.++|++.|||||+.||
T Consensus 1 g~Lhshd~~y~~~s~qqqvt~~~~~d~nn~-~~~~~~~~~~~~~~~~~slW~IE~~~~~~~~g~~v~~g~~iRL~H~~Tg 79 (190)
T PF02815_consen 1 GYLHSHDVIYPFHSEQQQVTTYPHNDDNNE-FRRTVNRESGAVATSANSLWQIEPVSEDPWSGGPVKWGDVIRLRHLSTG 79 (190)
T ss_dssp TCEECCEEEEEEETTTCEEEEEEESSTGCC-EEEBEESSSGGGGGSGGGEEEEEE-TSSTTTTSB-BTTSEEEEEETTTS
T ss_pred CeeEEEeeCCCCCCCcceEEEECccCCCcc-ccceeeeeccccccccccceEEecCCCCcccCCcccCCCEEEEEEccCC
Confidence 589999999999999999999977654444 8899999988999999999999986667789999999999999999999
Q ss_pred cceeeeecCchhhhhhhcccccCCCceeEEEEecCCC-CCC-CcccccCcccccccCccccCCCeEEEEEcccCceEEee
Q psy827 316 HYLAAEIDTDETMDQMRSKLRDHHGGSVYHLVSVPHP-NEI-SSLFELDPTTLTRADSLVPQSSYVRLHHLCTNTWVHST 393 (2693)
Q Consensus 316 ~YLa~~~~~~~~~~~~~~~~~~~~~~~~f~L~~~~~~-~~~-~s~F~L~~~~~~~~d~~V~~~SyvrIqH~~T~~WL~~~ 393 (2693)
+||.++.... +.........+.+.|+....+.. +|. ..+|+..+.+....+...+.+|+|||+|+.||.||+++
T Consensus 80 ~yL~~~~~~~----p~s~~~~~~~evs~~~~~~~~~d~~d~~~~i~~~~~~~~~~~~~~~~~~s~frL~H~~t~~~L~~~ 155 (190)
T PF02815_consen 80 KYLHSHDVKS----PISETDDYNQEVSCFGDDDIPGDANDDKVEIFEEKSSTGMGEDEIKTLDSYFRLRHVATGCWLHSH 155 (190)
T ss_dssp -EEEEEEEEE----CCCTCGG-SEEEEEEEEECESSS-SSG-GGEEEEEESSSCSSSSBBBTTSEEEEEETTTTEEEEEE
T ss_pred CEEEEccccc----ccccccccCcceeeEeeccccCCccccceeEEEecccCCccCCcEEecccEEEEEECCcCEEEecC
Confidence 9999987542 11111123455677877777432 443 56677777766667788999999999999999999999
Q ss_pred cccc
Q psy827 394 SIPI 397 (2693)
Q Consensus 394 ~~~i 397 (2693)
....
T Consensus 156 ~~~l 159 (190)
T PF02815_consen 156 DVKL 159 (190)
T ss_dssp EEES
T ss_pred Cccc
Confidence 7754
No 9
>KOG3359|consensus
Probab=99.54 E-value=1.6e-14 Score=187.60 Aligned_cols=146 Identities=21% Similarity=0.324 Sum_probs=119.1
Q ss_pred CeEeeCCEEEEEEccCCCceeeeeccccCCCC-CCceeEEe---ecCCceeEEEEcccccc----cccCccccCCEEEEE
Q psy827 176 DNVVVGDKVIMNPVNAGQQVLHVAANYELPDN-PGCKEVNV---VNSSTSWKVTLFMEHRE----NQEEILKGGDVVRLF 247 (2693)
Q Consensus 176 d~V~~gD~ViL~~v~~~~~~LH~s~~~~~p~~-~~~~EVn~---sd~~T~WkI~l~~~~~~----~~~~~Lk~GDVIRLf 247 (2693)
..|.+|++|++++.+.++.||| ||.+.||++ +++|||++ .|.|+.|.|.+.....+ .+...|+.||+|||.
T Consensus 312 ~~v~~GS~Itir~~~~~~gyLH-SH~~~YP~g~S~QQQVT~Y~~~D~NN~Wli~~~~~~~d~~~~~~~~~v~~G~~vrL~ 390 (723)
T KOG3359|consen 312 RDVAYGSTITLRHHKTGGGYLH-SHLHTYPEGYSEQQQVTGYPHKDANNEWLIELNPHPSDPVNATQIEPVRHGDIVRLR 390 (723)
T ss_pred ceeeeccEEEEEecCCcceeee-cccccCCCCcCccceEEeecccCCCceEEEecCCCCcccccCCcceeccCCcEEEEE
Confidence 5799999999999999999999 999999999 99999999 58999999995222222 235789999999999
Q ss_pred ecCCCccccccccccccce-eEEeeccCCCCCCCCCCCcEEEEEeecCCC-CCCCCc-cccceeEEEccCCcceeeee
Q psy827 248 HAEQEKFLTMDEYKKKQHV-FLRTTGRTSATSATSSKALWEIEVVQHDPC-RGGAGH-WNCLFRFKHLATGHYLAAEI 322 (2693)
Q Consensus 248 H~E~~~~Lt~~~~~~~~~v-~lr~~~~~~~~~~~s~~slW~IE~v~~~~~-~Gg~v~-w~~~fRLKHl~TG~YLa~~~ 322 (2693)
|..|+++|++|+.+++-+. ..+++++......++++++|+||+++..+. .++.++ -.+.|||+|+.|||||+...
T Consensus 391 H~~T~r~LhsHdv~apvs~~~~EvS~yg~~~~~gd~~d~w~veIv~~~~~~~~~~i~tl~t~fRl~h~~t~c~L~ss~ 468 (723)
T KOG3359|consen 391 HKMTGRNLHSHDVAAPVSPQQYEVSCYGDSGFEGDANDLWRVEIVKKKPNEDQERIKTLTTEFRLIHVLTGCYLKSSG 468 (723)
T ss_pred ecccCcccccCCCCCCCCCCceEEEEEeccccccCccccEEEEEecCCCCCCCceEEEeeeEEEEEEcccceEEccCC
Confidence 9999999999999876432 345555554445799999999999975311 344455 78999999999999999863
No 10
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=7.8e-14 Score=181.20 Aligned_cols=144 Identities=24% Similarity=0.316 Sum_probs=117.9
Q ss_pred eEeeC-CEEEEEEccCCCceeeeeccccCCCCCCceeEEe---ecCCceeEEEEcccccccccCccccCCEEEEEecCCC
Q psy827 177 NVVVG-DKVIMNPVNAGQQVLHVAANYELPDNPGCKEVNV---VNSSTSWKVTLFMEHRENQEEILKGGDVVRLFHAEQE 252 (2693)
Q Consensus 177 ~V~~g-D~ViL~~v~~~~~~LH~s~~~~~p~~~~~~EVn~---sd~~T~WkI~l~~~~~~~~~~~Lk~GDVIRLfH~E~~ 252 (2693)
.+.+| |.|+|+|.++++.||| ||.+.||++++++||++ .|.|+.|.|..+. ....+...|+.|++|||+|..|+
T Consensus 300 ~~~~g~S~itirh~~t~g~~LH-Sh~~~YP~gs~qqqvt~y~~~d~NN~W~~e~~~-~~~~~~~~l~~G~~vrL~H~~T~ 377 (699)
T COG1928 300 DPAYGSSTITIRHAGTGGGYLH-SHNQLYPEGSEQQQVTGYGHKDANNEWLIELSD-ENATQIEPLKDGQSVRLRHKYTG 377 (699)
T ss_pred eeeeeeeEEEEeccCCccchhh-cccCCCCCCcccceeecccccccccceeeeecc-cccccceeccCCcEEEEEEeecc
Confidence 45566 9999999999999999 99999999999999999 5899999999554 33334578999999999999999
Q ss_pred ccccccccccccceeEEeeccCCCCCCCCCCCcEEEEEeecCCC-CCCCCc-cccceeEEEccCCcceeeee
Q psy827 253 KFLTMDEYKKKQHVFLRTTGRTSATSATSSKALWEIEVVQHDPC-RGGAGH-WNCLFRFKHLATGHYLAAEI 322 (2693)
Q Consensus 253 ~~Lt~~~~~~~~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~-~Gg~v~-w~~~fRLKHl~TG~YLa~~~ 322 (2693)
++|++|+...+.+....++++.+....++.++.|.||++++.+. .++.+| |++.|||+|..|||||+.+.
T Consensus 378 ~~Lh~H~~~~pvS~~~~EvS~yg~~~~gd~~d~w~i~i~~~~~~~~~~~i~pl~t~fRl~h~~~~cyL~s~~ 449 (699)
T COG1928 378 KNLHFHDVKPPVSGNQYEVSGYGDSFEGDEKDDWIIEIVKDEANEDQERIHPLETKFRLYHVLTGCYLASHD 449 (699)
T ss_pred ceeecCCCCCCCCCCceeeeeccccccCCcccceeeEeeeccCCCccceeeecccceeeeecccceeeccCC
Confidence 99999998866433333444545558899999999999975322 223355 99999999999999999974
No 11
>KOG3358|consensus
Probab=99.38 E-value=8e-13 Score=142.60 Aligned_cols=137 Identities=18% Similarity=0.290 Sum_probs=119.3
Q ss_pred eEeeCCEEEEEEccCCCceeeeeccccCCCCCCceeEEee----cCCceeEEEEcccccccccCccccCCEEEEEecCCC
Q psy827 177 NVVVGDKVIMNPVNAGQQVLHVAANYELPDNPGCKEVNVV----NSSTSWKVTLFMEHRENQEEILKGGDVVRLFHAEQE 252 (2693)
Q Consensus 177 ~V~~gD~ViL~~v~~~~~~LH~s~~~~~p~~~~~~EVn~s----d~~T~WkI~l~~~~~~~~~~~Lk~GDVIRLfH~E~~ 252 (2693)
-|.+|+.+.|.|.+.+-+ || ||...|..++|++.|++. |.|+.|+|.+-....++....+|+|+.|||-|..|.
T Consensus 25 ~VTcgSvlKlln~~~~~R-LH-SHDVkYGSgSGQQSVTgv~~~dD~NSyW~Ik~~~~~~c~rG~pikcG~~iRL~H~~Tg 102 (211)
T KOG3358|consen 25 VVTCGSVLKLLNTKHKFR-LH-SHDVKYGSGSGQQSVTGVEGVDDSNSYWRIKPVSGTTCERGDPIKCGQTIRLTHLKTG 102 (211)
T ss_pred eEEhhhhHHhhcccccee-ee-ccccCccCCCCcceeecccccccCcceEEEecCCCCcccCCCccccCCeEEEEEeecc
Confidence 788999999998887777 99 999999999999999983 789999999998888888899999999999999999
Q ss_pred ccccccccccccceeEEeeccCCCCCCCCCCCcEEEEEeecCCCCCCCCccccceeEEEccCCcceeeee
Q psy827 253 KFLTMDEYKKKQHVFLRTTGRTSATSATSSKALWEIEVVQHDPCRGGAGHWNCLFRFKHLATGHYLAAEI 322 (2693)
Q Consensus 253 ~~Lt~~~~~~~~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~~Gg~v~w~~~fRLKHl~TG~YLa~~~ 322 (2693)
++||+|-...|-...+ +++..+....+|+.+.|.|- |.|..+.-+..+||||+.|+.||++..
T Consensus 103 knLHSHhf~sPlSgnq-EVSafG~dgegDtgD~Wtvi------c~g~~W~r~~~vrl~Hi~T~~yLs~sg 165 (211)
T KOG3358|consen 103 KNLHSHHFTSPLSGNQ-EVSAFGEDGEGDTGDHWTVI------CNGKTWKRDARVRLQHIDTSVYLSVSG 165 (211)
T ss_pred cchhhcccCCCCCCCe-eEEeecccCCCCcccceEEE------eCCccccccceEEEEEeccceeEEecc
Confidence 9999999887765444 34455567789999999976 677766678999999999999999964
No 12
>KOG3358|consensus
Probab=98.70 E-value=2.7e-08 Score=108.31 Aligned_cols=142 Identities=22% Similarity=0.280 Sum_probs=106.7
Q ss_pred cCccccCCEEEEEecCCCccccccccc-cccceeEEeeccCCCCCCCCCCCcEEEEEeecCCC-CCCCCccccceeEEEc
Q psy827 235 EEILKGGDVVRLFHAEQEKFLTMDEYK-KKQHVFLRTTGRTSATSATSSKALWEIEVVQHDPC-RGGAGHWNCLFRFKHL 312 (2693)
Q Consensus 235 ~~~Lk~GDVIRLfH~E~~~~Lt~~~~~-~~~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~-~Gg~v~w~~~fRLKHl 312 (2693)
++.+.+|.|+.|.|......||+|+++ +.......+|+-++ ..|+|++|+|-......| +|.+++.++++||.|+
T Consensus 23 e~~VTcgSvlKlln~~~~~RLHSHDVkYGSgSGQQSVTgv~~---~dD~NSyW~Ik~~~~~~c~rG~pikcG~~iRL~H~ 99 (211)
T KOG3358|consen 23 EDVVTCGSVLKLLNTKHKFRLHSHDVKYGSGSGQQSVTGVEG---VDDSNSYWRIKPVSGTTCERGDPIKCGQTIRLTHL 99 (211)
T ss_pred CceEEhhhhHHhhccccceeeeccccCccCCCCcceeecccc---cccCcceEEEecCCCCcccCCCccccCCeEEEEEe
Confidence 458999999999999999999999975 22334444565543 678999999997654334 7999999999999999
Q ss_pred cCCcceeeeecCchhhhhhhcccccCCCceeEEEEecCCCCCCCcccccCcccccccCccccCCCeEEEEEcccCceEEe
Q psy827 313 ATGHYLAAEIDTDETMDQMRSKLRDHHGGSVYHLVSVPHPNEISSLFELDPTTLTRADSLVPQSSYVRLHHLCTNTWVHS 392 (2693)
Q Consensus 313 ~TG~YLa~~~~~~~~~~~~~~~~~~~~~~~~f~L~~~~~~~~~~s~F~L~~~~~~~~d~~V~~~SyvrIqH~~T~~WL~~ 392 (2693)
.||+.|..+--+. .+....+-+.|. ...++ ...|..++..+.+...++.-||+||+.|+.+|+.
T Consensus 100 ~TgknLHSHhf~s--------PlSgnqEVSafG--~dgeg------DtgD~Wtvic~g~~W~r~~~vrl~Hi~T~~yLs~ 163 (211)
T KOG3358|consen 100 KTGKNLHSHHFTS--------PLSGNQEVSAFG--EDGEG------DTGDHWTVICNGKTWKRDARVRLQHIDTSVYLSV 163 (211)
T ss_pred ecccchhhcccCC--------CCCCCeeEEeec--ccCCC------CcccceEEEeCCccccccceEEEEEeccceeEEe
Confidence 9999999975432 233334444443 11111 2345677777778899999999999999999998
Q ss_pred ecc
Q psy827 393 TSI 395 (2693)
Q Consensus 393 ~~~ 395 (2693)
+..
T Consensus 164 sg~ 166 (211)
T KOG3358|consen 164 SGE 166 (211)
T ss_pred ccc
Confidence 865
No 13
>PF02815 MIR: MIR domain; InterPro: IPR003608 The MIR domain is named after three of the proteins in which it occurs: protein Mannosyltransferase (2.4.1.109 from EC), Inositol 1,4,5-trisphosphate receptor (IP3R) and Ryanodine receptor (RyR). MIR domains have also been found in eukaryotic stromal cell-derived factor 2 (SDF-2) and in Chlamydia trachomatis protein CT153. The MIR domain may have a ligand transferase function. This domain has a closed beta-barrel structure with a hairpin triplet, and has an internal pseudo-threefold symmetry. The MIR motifs that make up the MIR domain consist of ~50 residues and are often found in multiple copies. Inositol 1,4,5-trisphosphate (InsP3) is an intracellular second messenger that transduces growth factor and neurotransmitter signals. InsP3 mediates the release of Ca2+ from intracellular stores by binding to specific Ca2+ channel-coupled receptors. Ryanodine receptors are involved in communication between transverse-tubules and the sarcoplamic reticulum of cardiac and skeletal muscle. The proteins function as a Ca2+-release channels following depolarisation of transverse-tubules []. The function is modulated by Ca2+, Mg2+, ATP and calmodulin. Deficiency in the ryanodine receptor may be the cause of malignant hyperthermia (MH) and of central core disease of muscle (CCD) []. protein O-mannosyltransferases transfer mannose from DOL-P-mannose to ser or thr residues on proteins.; GO: 0016020 membrane; PDB: 1T9F_A 3UJ4_B 3UJ0_B 3T8S_B 3MAL_B 2XOA_A 1N4K_A.
Probab=98.62 E-value=7.5e-08 Score=112.95 Aligned_cols=128 Identities=19% Similarity=0.212 Sum_probs=81.6
Q ss_pred ceeeeeccccCCCCCCceeEEee---cCCce-------------------eEEEEcccccccccCccccCCEEEEEecCC
Q psy827 194 QVLHVAANYELPDNPGCKEVNVV---NSSTS-------------------WKVTLFMEHRENQEEILKGGDVVRLFHAEQ 251 (2693)
Q Consensus 194 ~~LH~s~~~~~p~~~~~~EVn~s---d~~T~-------------------WkI~l~~~~~~~~~~~Lk~GDVIRLfH~E~ 251 (2693)
+||| ||...||.++.+++|++. +.++. |.|.+... .....+.++.||+|||.|..|
T Consensus 1 g~Lh-shd~~y~~~s~qqqvt~~~~~d~nn~~~~~~~~~~~~~~~~~~slW~IE~~~~-~~~~g~~v~~g~~iRL~H~~T 78 (190)
T PF02815_consen 1 GYLH-SHDVIYPFHSEQQQVTTYPHNDDNNEFRRTVNRESGAVATSANSLWQIEPVSE-DPWSGGPVKWGDVIRLRHLST 78 (190)
T ss_dssp TCEE-CCEEEEEEETTTCEEEEEEESSTGCCEEEBEESSSGGGGGSGGGEEEEEE-TS-STTTTSB-BTTSEEEEEETTT
T ss_pred CeeE-EEeeCCCCCCCcceEEEECccCCCccccceeeeeccccccccccceEEecCCC-CcccCCcccCCCEEEEEEccC
Confidence 3699 999999988888999884 56666 99998543 222467889999999999999
Q ss_pred Ccccccccccccc----ceeEEeeccCCCCCCCCCCCc--EEEEEeecCCCCCCCCc-cccceeEEEccCCcceeeeec
Q psy827 252 EKFLTMDEYKKKQ----HVFLRTTGRTSATSATSSKAL--WEIEVVQHDPCRGGAGH-WNCLFRFKHLATGHYLAAEID 323 (2693)
Q Consensus 252 ~~~Lt~~~~~~~~----~v~lr~~~~~~~~~~~s~~sl--W~IE~v~~~~~~Gg~v~-w~~~fRLKHl~TG~YLa~~~~ 323 (2693)
++||++++...+. ....+++.+......++.++. ..++........++.++ -++.|||+|+.|||||.++..
T Consensus 79 g~yL~~~~~~~p~s~~~~~~~evs~~~~~~~~~d~~d~~~~i~~~~~~~~~~~~~~~~~~s~frL~H~~t~~~L~~~~~ 157 (190)
T PF02815_consen 79 GKYLHSHDVKSPISETDDYNQEVSCFGDDDIPGDANDDKVEIFEEKSSTGMGEDEIKTLDSYFRLRHVATGCWLHSHDV 157 (190)
T ss_dssp S-EEEEEEEEECCCTCGG-SEEEEEEEEECESSS-SSG-GGEEEEEESSSCSSSSBBBTTSEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEcccccccccccccCcceeeEeeccccCCccccceeEEEecccCCccCCcEEecccEEEEEECCcCEEEecCCc
Confidence 9999999976431 111222222211222444443 22232221111233343 579999999999999999754
No 14
>KOG3359|consensus
Probab=97.80 E-value=0.00027 Score=94.24 Aligned_cols=170 Identities=20% Similarity=0.260 Sum_probs=124.1
Q ss_pred cEeeeccEEEEeecCCC-ceEEEcCcc-chhhccCceEEEeecCCCcceEEEEecCcccccC------CCeEeeCCEEEE
Q psy827 115 MVVQYGSVVQLLHLKSN-KFLTVNKRL-PALLEKNAMRVYLDANGNEGSWFYILPFYKLRST------GDNVVVGDKVIM 186 (2693)
Q Consensus 115 ~~V~YG~~IQL~Hv~S~-kyLt~~~~~-~a~~Ek~a~~V~L~~~~se~s~F~I~P~~K~r~e------Gd~V~~gD~ViL 186 (2693)
..|.||+.|-++|..++ -||.-+.-. |+.+ +....|+.=++.+++-+|-|.| .....+ -++|.-||.|.|
T Consensus 312 ~~v~~GS~Itir~~~~~~gyLHSH~~~YP~g~-S~QQQVT~Y~~~D~NN~Wli~~-~~~~~d~~~~~~~~~v~~G~~vrL 389 (723)
T KOG3359|consen 312 RDVAYGSTITLRHHKTGGGYLHSHLHTYPEGY-SEQQQVTGYPHKDANNEWLIEL-NPHPSDPVNATQIEPVRHGDIVRL 389 (723)
T ss_pred ceeeeccEEEEEecCCcceeeecccccCCCCc-CccceEEeecccCCCceEEEec-CCCCcccccCCcceeccCCcEEEE
Confidence 57999999999998764 788765533 3322 5667899988889999999995 222222 368899999999
Q ss_pred EEccCCCceeeeeccccCCCCCCceeEEee-------cCCceeEEEEcccccccccCcccc-CCEEEEEecCCCcccccc
Q psy827 187 NPVNAGQQVLHVAANYELPDNPGCKEVNVV-------NSSTSWKVTLFMEHRENQEEILKG-GDVVRLFHAEQEKFLTMD 258 (2693)
Q Consensus 187 ~~v~~~~~~LH~s~~~~~p~~~~~~EVn~s-------d~~T~WkI~l~~~~~~~~~~~Lk~-GDVIRLfH~E~~~~Lt~~ 258 (2693)
+|..++.. || ||...-|-.+++.||+|. +.++.|+|.+..+...++++.++. -..+||.|..+++||..+
T Consensus 390 ~H~~T~r~-Lh-sHdv~apvs~~~~EvS~yg~~~~~gd~~d~w~veIv~~~~~~~~~~i~tl~t~fRl~h~~t~c~L~ss 467 (723)
T KOG3359|consen 390 RHKMTGRN-LH-SHDVAAPVSPQQYEVSCYGDSGFEGDANDLWRVEIVKKKPNEDQERIKTLTTEFRLIHVLTGCYLKSS 467 (723)
T ss_pred EecccCcc-cc-cCCCCCCCCCCceEEEEEeccccccCccccEEEEEecCCCCCCCceEEEeeeEEEEEEcccceEEccC
Confidence 99988777 99 998888878889999983 567899999876652233444444 458999999999999998
Q ss_pred cccccc--ceeEEeeccCCCCCCCCCCCcEEEEEe
Q psy827 259 EYKKKQ--HVFLRTTGRTSATSATSSKALWEIEVV 291 (2693)
Q Consensus 259 ~~~~~~--~v~lr~~~~~~~~~~~s~~slW~IE~v 291 (2693)
+..=|+ -.+.+++... ...+.+..|-||-.
T Consensus 468 ~~~LP~WGf~Q~EV~c~~---~~~~~~T~WnVEe~ 499 (723)
T KOG3359|consen 468 GKKLPEWGFEQQEVVCAK---NPRDKSTTWNVEEH 499 (723)
T ss_pred CCcCCcccccceEEeccc---CCcCCCceEEEecc
Confidence 754332 1222333332 25678899999953
No 15
>PF08709 Ins145_P3_rec: Inositol 1,4,5-trisphosphate/ryanodine receptor; InterPro: IPR014821 This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N-terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-gated receptors and voltage-gated Ca2+ channels on the plasma membrane, thus allowing the endoplasmic reticulum to discriminate between different types of neuronal activity []. ; PDB: 3UJ4_B 3UJ0_B 3T8S_B 3JRR_B 1XZZ_A 3ILA_B 3HSM_A 2XOA_A 3IM6_A 3IM7_A ....
Probab=97.52 E-value=0.00086 Score=80.36 Aligned_cols=161 Identities=17% Similarity=0.294 Sum_probs=98.5
Q ss_pred cEeeeccEEEEeecCCC-ceEEEcCccchhhccCceEEEeecC---------CCcceEEEEecCccccc-----------
Q psy827 115 MVVQYGSVVQLLHLKSN-KFLTVNKRLPALLEKNAMRVYLDAN---------GNEGSWFYILPFYKLRS----------- 173 (2693)
Q Consensus 115 ~~V~YG~~IQL~Hv~S~-kyLt~~~~~~a~~Ek~a~~V~L~~~---------~se~s~F~I~P~~K~r~----------- 173 (2693)
.++.||+.|-|....+. .||+...- ... ++.|... .-..|.|+|.|..+++.
T Consensus 4 ~~L~~Gd~V~L~~~~~~~~~l~a~Gf----~~~---~~~l~~~~~~~~~~p~~f~~clF~I~p~~~~~a~~~~~~~~~~~ 76 (214)
T PF08709_consen 4 QPLRYGDIVSLSCEDQDNGFLSAEGF----GNR---KCFLEPFSGDKNNPPKDFRDCLFQICPALSYRAQQELLKEQQRK 76 (214)
T ss_dssp -B-BTT-EEEEEEESSSCEEEEESCS----SC----BEEEEECCTTSSS-STTGGGGEEEEEEEEEHHHHHHHHHCCH--
T ss_pred cccccCcEEEEEEeCCCCeEEEEecc----cCC---cEEEEECCCcccCCccchheeEEEEcCCccHHHHHHHHHhhhhc
Confidence 57899999999999975 88887542 122 2334221 23589999999964321
Q ss_pred -----------------CCCeEeeCCEEEEEEccCCCceeeeeccccCCCCCCceeEEee---c-CCceeEEEEcccccc
Q psy827 174 -----------------TGDNVVVGDKVIMNPVNAGQQVLHVAANYELPDNPGCKEVNVV---N-SSTSWKVTLFMEHRE 232 (2693)
Q Consensus 174 -----------------eGd~V~~gD~ViL~~v~~~~~~LH~s~~~~~p~~~~~~EVn~s---d-~~T~WkI~l~~~~~~ 232 (2693)
+|.+|.||..|-|.|++++.. |.+.....-.....+..|.+. . ..+.|+|.|...+..
T Consensus 77 ~~~~~~~~~~a~~~~~~~g~~v~YGq~IQL~H~~S~ky-L~~~~~~~s~~e~~~~~v~L~~~~~~e~s~F~i~P~~k~r~ 155 (214)
T PF08709_consen 77 QQQEKLSDQAAQIEKEQNGTPVLYGQAIQLLHVKSNKY-LTCNSTEPSEYEKNNFKVSLQEFSSGENSWFRIHPAYKQRS 155 (214)
T ss_dssp -----HHHHHHHHHHHHHT-B-BTTEEEEEEETTTTEE-EEEEEEEESSSSTTSEEEEEESSSSSGGGEEEEEESSTTS-
T ss_pred ccccchhhhhhhhhcccCCCEEEecceEEEeEeCccEE-EEEeCCCCCcccccceEEEeccCCCcccEEEEEEcchheEc
Confidence 366799999999999977655 664433211234567788874 2 467899999766554
Q ss_pred cccCccccCCEEEEEecCCCcccccccccc-c-cceeEEeeccCCCCCCCCCCCcEEEEEe
Q psy827 233 NQEEILKGGDVVRLFHAEQEKFLTMDEYKK-K-QHVFLRTTGRTSATSATSSKALWEIEVV 291 (2693)
Q Consensus 233 ~~~~~Lk~GDVIRLfH~E~~~~Lt~~~~~~-~-~~v~lr~~~~~~~~~~~s~~slW~IE~v 291 (2693)
.++.++.||-|.|....++.|||+..... . ..... .+ .+......|.|-..
T Consensus 156 -~Gd~V~~gD~i~l~~~~~~~~Lh~s~~~~~~~~~~~~-eV------n~~~~~T~w~i~~~ 208 (214)
T PF08709_consen 156 -EGDPVRYGDQIILISVSTEQYLHVSSNKSLSDNKGCK-EV------NASFQQTSWKINPF 208 (214)
T ss_dssp -TTSB-BTT-EEEEEETTT-SEEEEEEEEEESSSSSCE-EE------EESSS--EEEEEEE
T ss_pred -CCCeeeeCCEEEEEECCCCCcccccCccccccCCCce-EE------EEEccccceEEEEE
Confidence 35679999999999999999999543211 0 00011 11 13456789999865
No 16
>PLN03223 Polycystin cation channel protein; Provisional
Probab=97.20 E-value=0.0014 Score=90.57 Aligned_cols=94 Identities=18% Similarity=0.352 Sum_probs=74.0
Q ss_pred hhHHHhhcchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhcccccc------------------ccc-----
Q psy827 2403 VLLLDVVYREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKDDFL------------------EPL----- 2459 (2693)
Q Consensus 2403 ~~L~di~~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~~f~------------------~~~----- 2459 (2693)
+=++-++.-+|.|.-+..++.+-.+.|+..++++++++|.||++|++.|..... +-.
T Consensus 1304 LKfLRLLRFNPrL~vLt~TLrrAapDLa~F~IIF~IVF~AFAqLG~LLFGt~ve~FSTf~sSL~TLFqMLLGDfdYF~eD 1383 (1634)
T PLN03223 1304 GRILKLMDFQPRLGVITRTLWLAGADLMHFFVIFGMVFVGYAFIGHVIFGNASVHFSDMTDSINSLFENLLGDITYFNED 1383 (1634)
T ss_pred HHHHHHhccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhcCHHHHHHHHHHHHHcCchHHHHH
Confidence 345566666899999999999999999999999999999999999999976422 000
Q ss_pred ---------cchhhhhhhHHHHHHHHHHHHHHHHhhhccccccHHHH
Q psy827 2460 ---------FVARVIYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEK 2497 (2693)
Q Consensus 2460 ---------~~~r~~~d~~f~~~v~ii~lnii~GiIiDtF~~lR~~~ 2497 (2693)
.+| -+|=.+|.+++++|++|++.|||.|+|++.|++.
T Consensus 1384 Lk~l~e~nrVLG-PIYFfSFILLV~FILLNMFIAII~DSFsEVK~d~ 1429 (1634)
T PLN03223 1384 LKNLTGLQFVVG-MIYFYSYNIFVFMILFNFLLAIICDAFGEVKANA 1429 (1634)
T ss_pred HHhhhcccchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 112 1233566677888999999999999999998763
No 17
>smart00472 MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases.
Probab=97.04 E-value=0.00091 Score=63.00 Aligned_cols=55 Identities=22% Similarity=0.350 Sum_probs=46.0
Q ss_pred CcEeeeccEEEEeecCCCceEEEcCccchhhccCceEEEeecCC--CcceEEEEecC
Q psy827 114 GMVVQYGSVVQLLHLKSNKFLTVNKRLPALLEKNAMRVYLDANG--NEGSWFYILPF 168 (2693)
Q Consensus 114 G~~V~YG~~IQL~Hv~S~kyLt~~~~~~a~~Ek~a~~V~L~~~~--se~s~F~I~P~ 168 (2693)
|..|.||+.|+|+|+.|++||.......+...+....|+....+ +.+++|.|.|.
T Consensus 1 g~~v~~g~~vrL~H~~tg~yL~s~~~~~~~~~~~q~eVt~~~~~~~~~~~~W~ie~~ 57 (57)
T smart00472 1 GGFVRWGDVVRLRHVTTGRYLHSHENKLPPWGDGQQEVTGYGNPAGDANTLWLIEPV 57 (57)
T ss_pred CCccccCCEEEEEEhhhCcEeecCCCCCCCCCCCcceEEEECCCCCCCCCcEEEEeC
Confidence 56799999999999999999999876535567788999996655 67899999873
No 18
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.77 E-value=0.0083 Score=80.51 Aligned_cols=171 Identities=16% Similarity=0.204 Sum_probs=121.6
Q ss_pred cEeeec-cEEEEeecCCC-ceEEEcCccchhhccCceEEEeecCCCcceEEEEecCcccccCCCeEeeCCEEEEEEccCC
Q psy827 115 MVVQYG-SVVQLLHLKSN-KFLTVNKRLPALLEKNAMRVYLDANGNEGSWFYILPFYKLRSTGDNVVVGDKVIMNPVNAG 192 (2693)
Q Consensus 115 ~~V~YG-~~IQL~Hv~S~-kyLt~~~~~~a~~Ek~a~~V~L~~~~se~s~F~I~P~~K~r~eGd~V~~gD~ViL~~v~~~ 192 (2693)
..+.|| ++|-++|..++ -||.-..-...+ .++...|++=+..+++--|-|++..-....-++|--|+.|.|.++.++
T Consensus 299 ~~~~~g~S~itirh~~t~g~~LHSh~~~YP~-gs~qqqvt~y~~~d~NN~W~~e~~~~~~~~~~~l~~G~~vrL~H~~T~ 377 (699)
T COG1928 299 RDPAYGSSTITIRHAGTGGGYLHSHNQLYPE-GSEQQQVTGYGHKDANNEWLIELSDENATQIEPLKDGQSVRLRHKYTG 377 (699)
T ss_pred eeeeeeeeEEEEeccCCccchhhcccCCCCC-CcccceeecccccccccceeeeecccccccceeccCCcEEEEEEeecc
Confidence 467788 99999999998 787654433221 456678898787788887888865534444578999999999999887
Q ss_pred CceeeeeccccCCCCCCceeEEee------cCCceeEEEEcccccccccCccccC-CEEEEEecCCCccccccccccccc
Q psy827 193 QQVLHVAANYELPDNPGCKEVNVV------NSSTSWKVTLFMEHRENQEEILKGG-DVVRLFHAEQEKFLTMDEYKKKQH 265 (2693)
Q Consensus 193 ~~~LH~s~~~~~p~~~~~~EVn~s------d~~T~WkI~l~~~~~~~~~~~Lk~G-DVIRLfH~E~~~~Lt~~~~~~~~~ 265 (2693)
.. || +|...-|..+++.||.+. +.+..|.|.+..+...+++..++.= ...||+|..+++||..++.+=+.=
T Consensus 378 ~~-Lh-~H~~~~pvS~~~~EvS~yg~~~~gd~~d~w~i~i~~~~~~~~~~~i~pl~t~fRl~h~~~~cyL~s~~~~lP~W 455 (699)
T COG1928 378 KN-LH-FHDVKPPVSGNQYEVSGYGDSFEGDEKDDWIIEIVKDEANEDQERIHPLETKFRLYHVLTGCYLASHDLKLPEW 455 (699)
T ss_pred ce-ee-cCCCCCCCCCCceeeeeccccccCCcccceeeEeeeccCCCccceeeecccceeeeecccceeeccCCCCCCCc
Confidence 77 99 887776666678899982 5788999998866443344555554 478999999999999987542211
Q ss_pred -eeEEeeccCCCCCCCCCCCcEEEEEe
Q psy827 266 -VFLRTTGRTSATSATSSKALWEIEVV 291 (2693)
Q Consensus 266 -v~lr~~~~~~~~~~~s~~slW~IE~v 291 (2693)
...+++.+.. . .+....|-||-.
T Consensus 456 gf~q~EV~c~~--~-~~~~T~W~ie~~ 479 (699)
T COG1928 456 GFSQREVLCAK--D-RDPSTTWNIEEN 479 (699)
T ss_pred ccccceeEeee--c-cCCcceeeeecc
Confidence 1122333322 1 667789999954
No 19
>smart00472 MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases.
Probab=96.72 E-value=0.002 Score=60.65 Aligned_cols=53 Identities=32% Similarity=0.426 Sum_probs=38.0
Q ss_pred CccccCCEEEEEecCCCccccccccc-ccc-ceeEEeeccCCCCCCCCCCCcEEEEE
Q psy827 236 EILKGGDVVRLFHAEQEKFLTMDEYK-KKQ-HVFLRTTGRTSATSATSSKALWEIEV 290 (2693)
Q Consensus 236 ~~Lk~GDVIRLfH~E~~~~Lt~~~~~-~~~-~v~lr~~~~~~~~~~~s~~slW~IE~ 290 (2693)
..++.||+|||.|..+++||++++.. .+. ....+++.... . ..+.+++|.||.
T Consensus 2 ~~v~~g~~vrL~H~~tg~yL~s~~~~~~~~~~~q~eVt~~~~-~-~~~~~~~W~ie~ 56 (57)
T smart00472 2 GFVRWGDVVRLRHVTTGRYLHSHENKLPPWGDGQQEVTGYGN-P-AGDANTLWLIEP 56 (57)
T ss_pred CccccCCEEEEEEhhhCcEeecCCCCCCCCCCCcceEEEECC-C-CCCCCCcEEEEe
Confidence 46889999999999999999999876 322 22233444332 1 247899999995
No 20
>KOG3599|consensus
Probab=96.01 E-value=0.093 Score=73.33 Aligned_cols=121 Identities=24% Similarity=0.452 Sum_probs=91.8
Q ss_pred ChhHHHHHHHHHHHHhhhccchhhHHhhHHHhhcchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhccc---
Q psy827 2377 DPEILYHLSYVMFCVLGLCMHPFFYSVLLLDVVYREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKD--- 2453 (2693)
Q Consensus 2377 d~~~~y~~~y~~~s~lg~~~~~~f~~~~L~di~~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~--- 2453 (2693)
|++.+=..=....-++|+.+ |+..+=++-++-=++|++-.-+.+.+-++.|+-+++.++|+.+.|+.+||+.|..
T Consensus 542 ~F~~~a~~~~~~~~l~a~lv--fl~tiK~~k~l~f~~t~~~~s~TL~ra~~~I~gf~l~~~I~~~aya~l~~llfG~~v~ 619 (798)
T KOG3599|consen 542 DFTEVAQWNIAARNLLAFLV--FLTTIKLWKVLRFNKTMSQFSSTLSRAWKEIVGFALMFLILFFAYAQLGYLLFGNQVS 619 (798)
T ss_pred CHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 44444444444444455432 5667778888877999999999999999999999999999999999999999876
Q ss_pred ccc--------------------ccccchh---hhhhhHHHHHHHHHHHHHHHHhhhccccccHHHHHH
Q psy827 2454 DFL--------------------EPLFVAR---VIYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQQ 2499 (2693)
Q Consensus 2454 ~f~--------------------~~~~~~r---~~~d~~f~~~v~ii~lnii~GiIiDtF~~lR~~~~~ 2499 (2693)
+|. +.....| ++|=.+|-|++..|++|++-+||-|+|++.|.+..+
T Consensus 620 ~f~~f~~s~~t~~~~~~G~~~~~~i~~~~r~LG~~~~~~~v~~v~~illnmF~aiI~~~~~evk~~~~~ 688 (798)
T KOG3599|consen 620 DFRTFVASIVTLLRYILGDFCPAEIFHANRILGPLLFLTYVFVVSFILLNLFVAIINDTYGEVKADLAK 688 (798)
T ss_pred ChHHHHHHHHHHHHHHhccCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHhh
Confidence 232 1111122 445567778888999999999999999999998776
No 21
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys. Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].
Probab=95.48 E-value=0.067 Score=71.07 Aligned_cols=92 Identities=24% Similarity=0.484 Sum_probs=73.2
Q ss_pred hHHhhHHHhhcchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhcccc---cc--------------------
Q psy827 2400 FYSVLLLDVVYREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKDD---FL-------------------- 2456 (2693)
Q Consensus 2400 f~~~~L~di~~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~~---f~-------------------- 2456 (2693)
+-.+=++-++.-++.+.-+.+++.+-.+.|+..+++.++++..||..|++.|... |.
T Consensus 306 l~~lrll~~l~f~~~~~~~~~tl~~a~~~l~~f~~~~~i~~~~fa~~g~l~fG~~~~~f~s~~~s~~tl~~~l~g~~~~~ 385 (425)
T PF08016_consen 306 LLWLRLLKLLRFNRRLSLLSRTLRRAAKDLLGFFVIFLIIFLAFAQAGYLLFGSYSEDFSSFSSSLVTLFRMLLGDFDYD 385 (425)
T ss_pred HHHHHHhhheeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCCHHHHHHHHHHHhcCCCchh
Confidence 3345566666668899999999999999999999999999999999999998753 32
Q ss_pred ----ccccchhhhhhhHHHHHHHHHHHHHHHHhhhccccc
Q psy827 2457 ----EPLFVARVIYDLLFFFIVIIIVLNLIFGVIIDTFAD 2492 (2693)
Q Consensus 2457 ----~~~~~~r~~~d~~f~~~v~ii~lnii~GiIiDtF~~ 2492 (2693)
.....+.++| .+|.+++.+|++|++.+||.|+|.+
T Consensus 386 ~~~~~~~~lg~l~~-~~~~~~~~~illNl~iaIi~~~y~~ 424 (425)
T PF08016_consen 386 ELYQANPVLGPLFF-FSFMFLVFFILLNLFIAIINDSYEE 424 (425)
T ss_pred hhhcccccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0112344433 7788888999999999999999976
No 22
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=92.61 E-value=0.74 Score=53.56 Aligned_cols=88 Identities=30% Similarity=0.466 Sum_probs=71.9
Q ss_pred hhHHhhHHHhhcchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhcccccc----------------------
Q psy827 2399 FFYSVLLLDVVYREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKDDFL---------------------- 2456 (2693)
Q Consensus 2399 ~f~~~~L~di~~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~~f~---------------------- 2456 (2693)
.+-.+.++.++.+.+.++..++++.+..+.+...+++.+++++.||++|+..|.....
T Consensus 67 ~l~~~R~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~f~~~ 146 (200)
T PF00520_consen 67 LLRLLRLLRLLRRFRSLRRLLRALIRSFPDLFKFILLLFIVLLFFACIGYQLFGGSDNSCCDPTWDSENDIYGYENFDSF 146 (200)
T ss_dssp HHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS-------SS----SSTHHHHSSH
T ss_pred eeccccccccccccccccccccccccccccccccccccccccccccchhheecccccccccccccccccccccccccccc
Confidence 3445567888889999999999999999999999999999999999999998876431
Q ss_pred -------------c------c-----ccchhhhhhhHHHHHHHHHHHHHHHHhh
Q psy827 2457 -------------E------P-----LFVARVIYDLLFFFIVIIIVLNLIFGVI 2486 (2693)
Q Consensus 2457 -------------~------~-----~~~~r~~~d~~f~~~v~ii~lnii~GiI 2486 (2693)
+ + ..+.-.+|-.+|.+++.++++|++.|+|
T Consensus 147 ~~s~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~nlliavi 200 (200)
T PF00520_consen 147 GESLYWLFQTMTGEGWGDVMPSCMSARSWLAVIFFISFIIIVSILLLNLLIAVI 200 (200)
T ss_dssp HHHHHHHHHHHTTTTCCCCHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCccccccccccccchhHhHHhhhhhhhHHHHHHHHHHhcC
Confidence 0 0 1234566777888999999999999987
No 23
>KOG2243|consensus
Probab=91.43 E-value=0.49 Score=64.47 Aligned_cols=132 Identities=18% Similarity=0.327 Sum_probs=0.0
Q ss_pred hhhhhHHHhhcchhhhhhhcc------------CccCchhhhHHHHHHHHHHHHHHHHhccChhhHHHHHHhhhhh----
Q psy827 1261 KHEQRLLRNVGVHTIVLDLLQ------------VPYDMKEDIRMNELMRLAHQFLQNFCLGNQQNQVLLHKHLDLF---- 1324 (2693)
Q Consensus 1261 ~~~Q~llrn~g~h~~vl~ll~------------~~~~~~~d~~m~el~~~~~~fL~~Fc~~N~~NQ~lL~~~l~~f---- 1324 (2693)
+.+|.+++.-|.-..||+-+. ..-.......-++++.+.++.|.+..|||+.|=+-++.++|.+
T Consensus 489 knrqnlfkeegmi~lvl~cidrl~iy~s~ahfa~ia~~eag~awk~iln~ly~llaalirgnr~ncaqfs~~ldwliskl 568 (5019)
T KOG2243|consen 489 KNRQNLFKEEGMIALVLECIDRLHIYNSAAHFADIAGEEAGEAWKEILNLLYELLAALIRGNRKNCAQFSGNLDWLISKL 568 (5019)
T ss_pred hhHHhHhhhhhHHHHHHHHHHHHhhhhhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcchhhHHHhcCcHhHHHHHH
Q ss_pred --hccCchHHHHHHHHhhccHHHhhhhhHHHHHHHHHHHHhhCccchhHHHHHHHHhchhhchHHhhhHH
Q psy827 1325 --LNPGIREAQTVCSVFQDNSNLCNEVNEKVIQHFVHCIETHGRHVQYLKFFQTIVKAEDQFIRKCQDMV 1392 (2693)
Q Consensus 1325 --l~~~i~e~~~l~~If~~N~~Lc~~v~e~~i~~~v~~i~~~gr~~~yL~fl~tivk~~~~~i~~~Q~~V 1392 (2693)
+...-|-.+++.-|...-++-.+-+.|.+|..++.++..|||...-|+.|-.+.-+.|--++.||.+|
T Consensus 569 drleassgilevlhcil~espealnii~eghiksiislldkhgrnhkvldilcslc~c~gvavranq~li 638 (5019)
T KOG2243|consen 569 DRLEASSGILEVLHCILTESPEALNIIAEGHIKSIISLLDKHGRNHKVLDILCSLCLCHGVAVRANQHLI 638 (5019)
T ss_pred HHhhhccchHhHhhhhhcCCHHHHhHHhhhhHHHHHHHHHhcCCcccHHHHHHHHHhhcceeeeccCcee
No 24
>PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins. Some family members contain two copies of the region.
Probab=91.09 E-value=1 Score=50.42 Aligned_cols=67 Identities=31% Similarity=0.427 Sum_probs=47.5
Q ss_pred ccccCCEEEEEecCCCccccccccccccceeEEeeccCCCCCCCCCCCcEEEEEeecCCCCCCCCccccceeEEEccCCc
Q psy827 237 ILKGGDVVRLFHAEQEKFLTMDEYKKKQHVFLRTTGRTSATSATSSKALWEIEVVQHDPCRGGAGHWNCLFRFKHLATGH 316 (2693)
Q Consensus 237 ~Lk~GDVIRLfH~E~~~~Lt~~~~~~~~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~~Gg~v~w~~~fRLKHl~TG~ 316 (2693)
+...|-.|||-- ..++||++++=. ..|.++ . .-.+-++-|.||.+.. + .+.+|||- +-|+
T Consensus 3 ~F~d~~~VRLRS-~~~kYL~ADeDg--~~Vs~~----~---~~~s~na~W~Ve~v~~-----~----~~~v~L~s-aYGr 62 (142)
T PF04601_consen 3 FFPDGKHVRLRS-HHGKYLHADEDG--EGVSQD----R---RGASLNAAWTVERVPG-----S----PNYVRLRS-AYGR 62 (142)
T ss_pred ccCCCCEEEEEe-cCCCEEEEcCCC--CeEEEC----C---CCCCCcceEEEEEecC-----C----CCEEEEee-ccCc
Confidence 345789999999 889999998732 223321 1 1236789999998742 1 35688875 8999
Q ss_pred ceeeeec
Q psy827 317 YLAAEID 323 (2693)
Q Consensus 317 YLa~~~~ 323 (2693)
||++...
T Consensus 63 YL~as~~ 69 (142)
T PF04601_consen 63 YLAASDE 69 (142)
T ss_pred eEeccCC
Confidence 9999644
No 25
>KOG2302|consensus
Probab=88.13 E-value=1.9 Score=58.86 Aligned_cols=95 Identities=25% Similarity=0.456 Sum_probs=77.0
Q ss_pred hHHHhhcchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhcccccc---------------------------
Q psy827 2404 LLLDVVYREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKDDFL--------------------------- 2456 (2693)
Q Consensus 2404 ~L~di~~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~~f~--------------------------- 2456 (2693)
--+-++.|-|.|+-|+..+-..-+.|.-..++.+.+.++|+|+|-..|+..|+
T Consensus 1235 RpLRviSra~glklVveTL~sSLkpIgnIvliccaffiiFgilgvqLFkgkfy~c~g~dtrnitnKSdc~aa~yRwvrhk 1314 (1956)
T KOG2302|consen 1235 RPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRNITNKSDCMAAPYRWVRHK 1314 (1956)
T ss_pred hHHHHHhhcccHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHhcccceeccccccccccchhhhcccchhhhhhh
Confidence 34567789999999999999999999999999999999999999999996664
Q ss_pred -------------------c------------------c---ccchhhhhhhHHHHHHHHHHHHHHHHhhhccccccHHH
Q psy827 2457 -------------------E------------------P---LFVARVIYDLLFFFIVIIIVLNLIFGVIIDTFADLRSE 2496 (2693)
Q Consensus 2457 -------------------~------------------~---~~~~r~~~d~~f~~~v~ii~lnii~GiIiDtF~~lR~~ 2496 (2693)
+ | .-.|-.+|=.+|++||...++|++.|+.+..|-.=|+.
T Consensus 1315 yNfdnlgqalmSLFvLaSkDgWv~ImyDgldavavdqqPI~nhnpwmllYfIsfllIvsffVlnmfVgvvvenfhKcrqh 1394 (1956)
T KOG2302|consen 1315 YNFDNLGQALMSLFVLASKDGWVNIMYDGLDAVAVDQQPILNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQH 1394 (1956)
T ss_pred cccchHHHHHHHHHHHhcccchhhhhccchhhceeeeeccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00123556788888999999999999999999877764
Q ss_pred HH
Q psy827 2497 KQ 2498 (2693)
Q Consensus 2497 ~~ 2498 (2693)
++
T Consensus 1395 qe 1396 (1956)
T KOG2302|consen 1395 QE 1396 (1956)
T ss_pred HH
Confidence 43
No 26
>KOG2301|consensus
Probab=87.80 E-value=0.92 Score=67.59 Aligned_cols=97 Identities=20% Similarity=0.378 Sum_probs=78.2
Q ss_pred HhhHHHhhcchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhccc--------ccc-----------------
Q psy827 2402 SVLLLDVVYREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKD--------DFL----------------- 2456 (2693)
Q Consensus 2402 ~~~L~di~~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~--------~f~----------------- 2456 (2693)
.+.++-++.+-.+++..+-++-....++...++|.+++.|+||++|-..|.- .+.
T Consensus 1260 V~R~l~Li~~~~~ir~LL~t~~~Sl~al~~i~lLl~ll~fiYAi~Gmq~Fg~Vkl~~i~~~~NF~tf~~a~i~LFr~~Tg 1339 (1592)
T KOG2301|consen 1260 VGRFLRLIPQAKTIRTLLLTLMMSLPALFFIILLLFLLFFIYAIIGMQLFGYVKLGGINDHNNFRTFPNSMVVLFRCATG 1339 (1592)
T ss_pred HHHHHHhccccchhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCcccccchhheeeeeehhhh
Confidence 4456667778889999999999999999999999999999999999877642 110
Q ss_pred -------------cc-------c-------cchhhhhhhHHHHHHHHHHHHHHHHhhhccccccHHHHH
Q psy827 2457 -------------EP-------L-------FVARVIYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQ 2498 (2693)
Q Consensus 2457 -------------~~-------~-------~~~r~~~d~~f~~~v~ii~lnii~GiIiDtF~~lR~~~~ 2498 (2693)
.| . +.+-++|=.+|++|...|++|+.-+||.|-|+-+.++..
T Consensus 1340 e~W~~im~~~l~s~p~Cdp~~~~~~~dCGn~~~Ai~YF~Sf~iIs~~IvvNLfVAVImeNFs~~t~~~s 1408 (1592)
T KOG2301|consen 1340 EGWNDIMDDCLNSKPFCDPDDGNNGTDCGNPTVAIIYFVSWILISSYIVVNLFVAVILENFSYATEDSS 1408 (1592)
T ss_pred hhHHHHHHHHhcCCCCCCCCCCCcccccCCCCcceehhhHHHHHHHHHHHHHHHHHHHhhhhhhccccc
Confidence 11 1 223467779999999999999999999999999977655
No 27
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=79.84 E-value=6.3 Score=56.53 Aligned_cols=96 Identities=14% Similarity=0.170 Sum_probs=65.6
Q ss_pred HhhHHHhhcchHHHHHHHHHHhcchh-hHHHHHHHHHHHHHHHHHHHHhhccc----------------------cccc-
Q psy827 2402 SVLLLDVVYREETLLNVIRSVTRNGR-SIILTAVLALILVYMFSIIGYMFFKD----------------------DFLE- 2457 (2693)
Q Consensus 2402 ~~~L~di~~r~~~L~nvi~sv~~n~~-~l~lt~~L~~i~~y~fsii~~~~f~~----------------------~f~~- 2457 (2693)
.+-++.+...++.+--.+.++.+=.+ -++-.+++.++++..||+..|..|.. .|..
T Consensus 480 ~~rll~~~~~~~~lGp~~i~l~~mi~~dl~~F~~i~~v~l~aF~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 559 (743)
T TIGR00870 480 WLNLLYIFRGNQHLGPLQIMIGRMILGDILRFLFIYAVVLFGFACGLNQLYQYYDELKLNECSNPHARSCEKQGNAYSTL 559 (743)
T ss_pred HHHHHHHHhhchhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccCH
Confidence 34566666667776555666655556 78888888888899999888877642 1210
Q ss_pred ---------------------cc---cchhhhhhhHHHHHHHHHHHHHHHHhhhccccccHHHHH
Q psy827 2458 ---------------------PL---FVARVIYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQ 2498 (2693)
Q Consensus 2458 ---------------------~~---~~~r~~~d~~f~~~v~ii~lnii~GiIiDtF~~lR~~~~ 2498 (2693)
+. +++.+ +=.+|-++++||++|+..+++-|||....++..
T Consensus 560 ~~s~~~lf~~~~G~~~~~~~~~~~~~~~~~i-l~~~y~~i~~ilLlNlLIAmm~~t~~~v~~~~~ 623 (743)
T TIGR00870 560 FETSQELFWAIIGLGDLLANEHKFTEFVGLL-LFGAYNVIMYILLLNMLIAMMGNTYQLIADDAD 623 (743)
T ss_pred HHHHHHHHHHHcCCcccccccccchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH
Confidence 00 11222 224567778899999999999999998877644
No 28
>KOG2301|consensus
Probab=74.04 E-value=10 Score=57.13 Aligned_cols=91 Identities=23% Similarity=0.449 Sum_probs=68.2
Q ss_pred HhhHHHh---hcchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhcccccccc-----cc-------------
Q psy827 2402 SVLLLDV---VYREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKDDFLEP-----LF------------- 2460 (2693)
Q Consensus 2402 ~~~L~di---~~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~~f~~~-----~~------------- 2460 (2693)
+|.|+-| ..-.|+|++.++++-.+.++|+--.++.++++++||++|...|...|... .+
T Consensus 535 ~frllRIfkl~k~wp~l~~lv~~i~ns~~~l~~L~l~l~i~i~Ifa~~gmqlFg~~~n~~~~~~~~~~~fp~sfl~vFql 614 (1592)
T KOG2301|consen 535 SFRLLRIFKLIKSWPTLNDLVKSIFNSGKALGNLVLFLFIFIFIFAAIGMQLFGGVYNLHCDIHWHFTDFPHSFLSVFQI 614 (1592)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhhHHhhCcccCCCCCCccchhhCHHHHHHHHHH
Confidence 4444444 45689999999999999999999999999999999999999888766532 00
Q ss_pred ----chh----------hhhh----hHHHHHHHHHHHHHHHHhhhccccc
Q psy827 2461 ----VAR----------VIYD----LLFFFIVIIIVLNLIFGVIIDTFAD 2492 (2693)
Q Consensus 2461 ----~~r----------~~~d----~~f~~~v~ii~lnii~GiIiDtF~~ 2492 (2693)
|-- ..+. +..|++.+.++||+...++.|.|+.
T Consensus 615 t~e~W~evm~~~~~~~~~~~~~i~Fi~~~l~gn~vvLnlFlAl~~~n~~~ 664 (1592)
T KOG2301|consen 615 TCEEWTDVMWDCMEAAGQPLCAIYFIAYFLFGNLVVLNLFLALILDNFES 664 (1592)
T ss_pred cCCchHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHhhchh
Confidence 000 1222 3334555678899999999999975
No 29
>KOG3614|consensus
Probab=67.93 E-value=95 Score=45.85 Aligned_cols=126 Identities=13% Similarity=0.291 Sum_probs=70.0
Q ss_pred eeeeeeeeecccccchhhhhhhhccChhHHHHHHHHHHHHhhhccchhhHHhhHHHhhcchHHHHHHHHHHhcchhhHHH
Q psy827 2352 MKGIHLISIMGNQGTFTKQINQIFMDPEILYHLSYVMFCVLGLCMHPFFYSVLLLDVVYREETLLNVIRSVTRNGRSIIL 2431 (2693)
Q Consensus 2352 ~k~~~~~~~~~~~~~~~~~~~~~~~d~~~~y~~~y~~~s~lg~~~~~~f~~~~L~di~~r~~~L~nvi~sv~~n~~~l~l 2431 (2693)
.+.+++++.-..-|.++--+..|+.| .+|+++.+++-++++-+ -.+||++|...-.+
T Consensus 904 ~rLl~~f~V~~~lGPyI~mv~kMm~d--mf~flfllaV~LlsfGV---------------------arQaIl~P~e~~~w 960 (1381)
T KOG3614|consen 904 LRLLHYFTVSKQLGPYIVMVKKMMKD--MFFFLFLLAVVLLSFGV---------------------ARQAILRPDEPRHW 960 (1381)
T ss_pred HHHhhheeeccccCchhHHHHHHHHH--HHHHHHHHHHHHHHhhh---------------------hhhhhcCCCCCchH
Confidence 44555555555556666666666655 34444444444433321 13566666655555
Q ss_pred HHHHHHHHHHHHHHHHHhhcc--cc------cc-c--------------cccchhhhhhhHHHHHHHHHHHHHHHHhhhc
Q psy827 2432 TAVLALILVYMFSIIGYMFFK--DD------FL-E--------------PLFVARVIYDLLFFFIVIIIVLNLIFGVIID 2488 (2693)
Q Consensus 2432 t~~L~~i~~y~fsii~~~~f~--~~------f~-~--------------~~~~~r~~~d~~f~~~v~ii~lnii~GiIiD 2488 (2693)
..+=-++.-=+++|+|=.+-. |. +. + |-+|.-.+.=.+|+++..|+++|+.+.+---
T Consensus 961 ~l~R~i~y~PYlmifGeV~a~eID~~~~e~~~~~~p~~~~~s~~~~~c~pg~wl~plLl~~yLLv~nILL~NLLIA~Fn~ 1040 (1381)
T KOG3614|consen 961 WLFRNIFYWPYLMLFGEVPADEIDTCTCEKSFCGEPLRYESSPGNPSCPPGSWLTPLLLVIYLLVTNILLVNLLIAMFSY 1040 (1381)
T ss_pred HHHHHHHHHHHHHHhccccHhhhhhhcccccccCCCcccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544444443344444432211 00 00 1 1223345566778888899999999999989
Q ss_pred cccccHHHHHHH
Q psy827 2489 TFADLRSEKQQK 2500 (2693)
Q Consensus 2489 tF~~lR~~~~~~ 2500 (2693)
||.+--++-+++
T Consensus 1041 tf~~v~~~sd~i 1052 (1381)
T KOG3614|consen 1041 TFGNVQENSDQI 1052 (1381)
T ss_pred HHHHHHHhHHHH
Confidence 998887765543
No 30
>PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins. Some family members contain two copies of the region.
Probab=65.49 E-value=38 Score=38.43 Aligned_cols=105 Identities=22% Similarity=0.368 Sum_probs=62.2
Q ss_pred CCEEEEEEccCCCceeeeeccccCCCCCCceeEEe----ecCCceeEEEEcccccccccCccccCCEEEEEecCCCcccc
Q psy827 181 GDKVIMNPVNAGQQVLHVAANYELPDNPGCKEVNV----VNSSTSWKVTLFMEHRENQEEILKGGDVVRLFHAEQEKFLT 256 (2693)
Q Consensus 181 gD~ViL~~v~~~~~~LH~s~~~~~p~~~~~~EVn~----sd~~T~WkI~l~~~~~~~~~~~Lk~GDVIRLfH~E~~~~Lt 256 (2693)
|--|.|+| .. +.|||. -. |+ .-|.. +..++.|.|.+... ++++|||. +--+.||+
T Consensus 7 ~~~VRLRS-~~-~kYL~A-De----Dg---~~Vs~~~~~~s~na~W~Ve~v~~----------~~~~v~L~-saYGrYL~ 65 (142)
T PF04601_consen 7 GKHVRLRS-HH-GKYLHA-DE----DG---EGVSQDRRGASLNAAWTVERVPG----------SPNYVRLR-SAYGRYLA 65 (142)
T ss_pred CCEEEEEe-cC-CCEEEE-cC----CC---CeEEECCCCCCCcceEEEEEecC----------CCCEEEEe-eccCceEe
Confidence 45678888 34 456993 21 11 11222 23578899987521 25788885 77899999
Q ss_pred ccccccc-cceeEEeeccCCCCCCCCCCCcEEEEEeecCCCCCCCCccccceeEEEccCCcceeee
Q psy827 257 MDEYKKK-QHVFLRTTGRTSATSATSSKALWEIEVVQHDPCRGGAGHWNCLFRFKHLATGHYLAAE 321 (2693)
Q Consensus 257 ~~~~~~~-~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~~Gg~v~w~~~fRLKHl~TG~YLa~~ 321 (2693)
+.+...+ ...-.+++..... ..+...+|+.. . .| ..++|||. .|+||-+.
T Consensus 66 as~~~~~lG~~G~~v~Q~~~~--~~d~~~~Wepv--r----~g------~~V~Lr~~-~gr~LRAN 116 (142)
T PF04601_consen 66 ASDEPALLGHTGRRVVQTDPD--RLDSSVEWEPV--R----DG------FYVKLRHR-SGRYLRAN 116 (142)
T ss_pred ccCCcCCCCCCCCEEEecCCc--cCCCCceEEEe--c----CC------CEEEEEec-CCceEEcC
Confidence 9876432 1222233333222 25566799643 2 23 36799985 68999885
No 31
>PF05529 Bap31: B-cell receptor-associated protein 31-like ; InterPro: IPR008417 Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31 [].; GO: 0006886 intracellular protein transport, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=45.73 E-value=5e+02 Score=31.03 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=23.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy827 2583 DEGEAEQIELRSLQSQLETTQFLVTNLSQQLSELRD 2618 (2693)
Q Consensus 2583 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ql~~l~~ 2618 (2693)
++.+..+.|++.+..++++...-++.+..|.+.+..
T Consensus 154 ~~~~~~~~ei~~lk~el~~~~~~~~~LkkQ~~~l~~ 189 (192)
T PF05529_consen 154 EENKKLSEEIEKLKKELEKKEKEIEALKKQSEGLQK 189 (192)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455567778888888776666666666655543
No 32
>PF09759 Atx10homo_assoc: Spinocerebellar ataxia type 10 protein domain; InterPro: IPR019156 This is the conserved C-terminal 100 residues of Ataxin-10. Ataxin-10 belongs to the family of armadillo repeat proteins and in solution it tends to form homotrimeric complexes, which associate via a tip-to-tip association in a horseshoe-shaped contact with the concave sides of the molecules facing each other. This domain may represent the homo-association site since that is located near the C terminus of Ataxin-10. The protein does not contain a signal sequence for secretion or any subcellular compartment confirming its cytoplasmic localisation, specifically to the olivocerebellar region [].
Probab=45.13 E-value=49 Score=35.59 Aligned_cols=65 Identities=26% Similarity=0.471 Sum_probs=44.3
Q ss_pred HHHHHHhhhcccCCCCCCCCCchhhhhHHHhhcchhhhhhhccCccCchhhhHHHHHHHHHHHHHHHHhccChhhHHHHH
Q psy827 1239 ILIRMNKLCISRATPLSPVKPRKHEQRLLRNVGVHTIVLDLLQVPYDMKEDIRMNELMRLAHQFLQNFCLGNQQNQVLLH 1318 (2693)
Q Consensus 1239 ~l~~~~~~c~~~~~~~~~~k~~~~~Q~llrn~g~h~~vl~ll~~~~~~~~d~~m~el~~~~~~fL~~Fc~~N~~NQ~lL~ 1318 (2693)
++.-+..+|+. ++..|..+|.+|.-+.+|+--.+ | ..+..|.| -|---+++.|.+|++||..+.
T Consensus 6 lvrlianl~~~----------~~~~Qd~vr~~~Gi~liL~~c~i--D-~~nP~irE---wai~aiRnL~e~n~eNQ~~I~ 69 (102)
T PF09759_consen 6 LVRLIANLCYK----------NKEVQDLVRELGGIPLILSCCNI--D-DHNPFIRE---WAIFAIRNLCEGNPENQEFIA 69 (102)
T ss_pred HHHHHHHHHhC----------CHHHHHHHHHcCChHHHHHhcCC--C-cccHHHHH---HHHHHHHHHHhCCHHHHHHHH
Confidence 34445677764 46779999999998888887542 2 23334443 444557788999999998554
Q ss_pred H
Q psy827 1319 K 1319 (2693)
Q Consensus 1319 ~ 1319 (2693)
.
T Consensus 70 ~ 70 (102)
T PF09759_consen 70 Q 70 (102)
T ss_pred h
Confidence 3
No 33
>PF00167 FGF: Fibroblast growth factor; InterPro: IPR002348 The interleukin-1 (IL1) and heparin-binding growth factor (HBGF) families share low sequence similarity (about 25% []) but have very similar structures. Coupled with the Kunitz-type soybean trypsin inhibitors (STI), they form a structural superfamily. Despite their structural correspondence, however, they show no sequence similarity to the STI family. The crystal structures of interleukin-1 beta and HBGF1 have been solved, showing both families to have the same 12-stranded beta-sheet structure []; the beta-sheets are arranged in 3 similar lobes around a central axis, 6 strands forming an anti-parallel beta-barrel [, ]. The beta-sheets are generally well preserved and the crystal structures superimpose in these areas. The intervening loops are less well conserved - the loop between beta-strands 6 and 7 is slightly longer in interleukin-1 beta.; GO: 0008083 growth factor activity; PDB: 1AFC_F 1BAR_A 2P39_A 1EV2_D 2BFH_A 4FGF_A 1BAS_A 1BFG_A 1FQ9_B 1CVS_A ....
Probab=38.62 E-value=1.5e+02 Score=32.71 Aligned_cols=58 Identities=21% Similarity=0.326 Sum_probs=38.4
Q ss_pred EEEEecCCCccccccccccccceeEEeeccCCCCCCCCCCCcEEEEEeecCCCCCCCCccccceeEEEccCCcceeeeec
Q psy827 244 VRLFHAEQEKFLTMDEYKKKQHVFLRTTGRTSATSATSSKALWEIEVVQHDPCRGGAGHWNCLFRFKHLATGHYLAAEID 323 (2693)
Q Consensus 244 IRLfH~E~~~~Lt~~~~~~~~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~~Gg~v~w~~~fRLKHl~TG~YLa~~~~ 323 (2693)
++||-.. +.+|.+..-. . +.+. ....+..+.|+|+.+. ...++||++.|++||+....
T Consensus 3 ~~Ly~~~-~~~L~i~~~g---~----V~gt---~~~~~~~s~~~i~~~~-----------~g~V~i~~~~s~~YLcmn~~ 60 (122)
T PF00167_consen 3 VQLYCRT-GYFLQINPNG---T----VDGT---GDDNSPYSVFEIHSVG-----------FGVVRIRGVKSCRYLCMNKC 60 (122)
T ss_dssp EEEEETT-SEEEEEETTS---B----EEEE---SSTTSTTGEEEEEEEE-----------TTEEEEEETTTTEEEEEBTT
T ss_pred EEEEECC-CeEEEECCCC---e----EeCC---CCcCcceeEEEEEecc-----------ceEEEEEEecceEEEEECCC
Confidence 4555544 7777665421 1 1111 2346788999999863 13789999999999999654
No 34
>PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1
Probab=36.94 E-value=9e+02 Score=33.98 Aligned_cols=71 Identities=21% Similarity=0.465 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhhccchhhHHhhHHHhhcchHHHHH---HHHHHhcchhhHHHHHHHHHHHHHH-HHHHHHhhcccc
Q psy827 2383 HLSYVMFCVLGLCMHPFFYSVLLLDVVYREETLLN---VIRSVTRNGRSIILTAVLALILVYM-FSIIGYMFFKDD 2454 (2693)
Q Consensus 2383 ~~~y~~~s~lg~~~~~~f~~~~L~di~~r~~~L~n---vi~sv~~n~~~l~lt~~L~~i~~y~-fsii~~~~f~~~ 2454 (2693)
.++..++++.|+..+|.=|+-+++-+...+=.|-- ++.=+ +.+.++.+..++.+++..+ .+..+|.||.+.
T Consensus 434 ~i~N~~~~~~gl~~~~~df~~~~l~i~i~n~~lY~~fYiimKi-~~~E~i~~~~~~~~~~~~~~W~~a~yff~~~~ 508 (570)
T PF13965_consen 434 NIINWALAIYGLISSPRDFASFLLAIFIGNLLLYLFFYIIMKI-RHREKILLKPIIYLVLAFVSWGFALYFFFQNT 508 (570)
T ss_pred HHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHHHHHH-hhcChhHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 77888889999988886555555555433222221 12222 3445555545444444333 333344445443
No 35
>PRK10537 voltage-gated potassium channel; Provisional
Probab=35.94 E-value=2.2e+02 Score=37.98 Aligned_cols=23 Identities=26% Similarity=0.665 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHhhccccc
Q psy827 2433 AVLALILVYMFSIIGYMFFKDDF 2455 (2693)
Q Consensus 2433 ~~L~~i~~y~fsii~~~~f~~~f 2455 (2693)
++++++.+-+|+++|+.++.+.|
T Consensus 140 ~~~~~~~l~~~~~~g~~~~~~~f 162 (393)
T PRK10537 140 AVISITSLLFYSTFGALYLGDGF 162 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcccc
Confidence 34455556688899988777654
No 36
>PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A ....
Probab=34.12 E-value=1.3e+02 Score=31.85 Aligned_cols=79 Identities=10% Similarity=0.257 Sum_probs=46.5
Q ss_pred CCcEEEEEeecCCCCCCCCccccceeEEEccCCcceeeeecCchhhhhhhcccccCCCceeEEEEecCCCCCCCcccccC
Q psy827 283 KALWEIEVVQHDPCRGGAGHWNCLFRFKHLATGHYLAAEIDTDETMDQMRSKLRDHHGGSVYHLVSVPHPNEISSLFELD 362 (2693)
Q Consensus 283 ~slW~IE~v~~~~~~Gg~v~w~~~fRLKHl~TG~YLa~~~~~~~~~~~~~~~~~~~~~~~~f~L~~~~~~~~~~s~F~L~ 362 (2693)
+-.|++..+.. . +..|+|++..||+||.+.......+ ..... .+.....+..+.+.
T Consensus 2 nQ~W~~~~~~~---~------~g~Y~i~n~~sg~~L~v~~~~~~~g-------------~~v~~--~~~~~~~~Q~W~i~ 57 (105)
T PF14200_consen 2 NQQWTFTPVGD---S------DGYYKIRNVNSGKYLDVAGGSTANG-------------TNVQQ--WTCNGNDNQQWKIE 57 (105)
T ss_dssp GGEEEEEEEET---T------TTEEEEEETTTTEEEEEGCTTCSTT-------------EBEEE--EESSSSGGGEEEEE
T ss_pred CCEEEEEEecC---C------CCEEEEEECCCCCEEEeCCCCcCCC-------------cEEEE--ecCCCCcCcEEEEE
Confidence 34699987631 1 3359999999999999965432111 11111 11111333444544
Q ss_pred cccccccCccccCCCeEEEEEcccCceEEeecc
Q psy827 363 PTTLTRADSLVPQSSYVRLHHLCTNTWVHSTSI 395 (2693)
Q Consensus 363 ~~~~~~~d~~V~~~SyvrIqH~~T~~WL~~~~~ 395 (2693)
+.. +-+++|+...||..|.+...
T Consensus 58 ~~~----------~g~y~I~n~~s~~~Ldv~~~ 80 (105)
T PF14200_consen 58 PVG----------DGYYRIRNKNSGKVLDVAGG 80 (105)
T ss_dssp EST----------TSEEEEEETSTTEEEEEGGG
T ss_pred Eec----------CCeEEEEECCCCcEEEECCC
Confidence 321 23579999999999988754
No 37
>KOG2568|consensus
Probab=30.60 E-value=1.6e+03 Score=30.99 Aligned_cols=14 Identities=29% Similarity=0.852 Sum_probs=8.3
Q ss_pred hHHHHHhHHHHHHH
Q psy827 2214 LFWVSSYMSVWSNI 2227 (2693)
Q Consensus 2214 l~~~s~~~~lw~~i 2227 (2693)
+.|+......|.++
T Consensus 218 llW~~~~~~y~~di 231 (518)
T KOG2568|consen 218 LLWFFQCAQYWHDI 231 (518)
T ss_pred HHHHHHHHHHHHHH
Confidence 34555566667774
No 38
>KOG3713|consensus
Probab=30.00 E-value=1.7e+02 Score=39.29 Aligned_cols=95 Identities=21% Similarity=0.297 Sum_probs=72.9
Q ss_pred cchHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhhcccc----cc----------------------ccccchh
Q psy827 2410 YREETLLNVIRSVTRNGRSIILTAVLALILVYMFSIIGYMFFKDD----FL----------------------EPLFVAR 2463 (2693)
Q Consensus 2410 ~r~~~L~nvi~sv~~n~~~l~lt~~L~~i~~y~fsii~~~~f~~~----f~----------------------~~~~~~r 2463 (2693)
..+..|+.....+.+..+++.+..+...+.|-+||-+.|+.=++. |. .....|+
T Consensus 326 RhS~GLr~lg~Tlr~S~~ElglLllfL~~GI~iFStlvY~~Ek~~~~~~FtSIPa~~WWaiVTMTTVGYGDm~P~T~~Gk 405 (477)
T KOG3713|consen 326 RHSTGLRTLGLTLRRSYRELGLLLLFLAVGIVIFSTLVYFAEKDEPDTKFTSIPAGFWWAVVTMTTVGYGDMVPVTVLGK 405 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccchhheeeEEEeeecccCccccccchH
Confidence 346788888999999999999999999999999999999865542 32 1123455
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHhhc
Q psy827 2464 VIYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQQKELILKN 2506 (2693)
Q Consensus 2464 ~~~d~~f~~~v~ii~lnii~GiIiDtF~~lR~~~~~~~~d~~~ 2506 (2693)
++--. -++-.|+++.+=.-||+|+|+..-.+.++++...+.
T Consensus 406 lvas~--cil~GVLvlAlPItiIv~nF~~~y~~~k~~~~~~~~ 446 (477)
T KOG3713|consen 406 LVASL--CILCGVLVLALPITIIVNNFSMYYSELKAREKAPKR 446 (477)
T ss_pred HHHHH--HHHHhHHHhhcchHhHhhhHHHHHHHHHHHHHhhhh
Confidence 55444 456778888888899999999998888877766654
No 39
>PHA01750 hypothetical protein
Probab=26.85 E-value=1.1e+02 Score=29.79 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=29.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy827 2585 GEAEQIELRSLQSQLETTQFLVTNLSQQLSELRDQM 2620 (2693)
Q Consensus 2585 ~~~e~~~~~~~~~~~~~~~~~~~~~~~ql~~l~~~~ 2620 (2693)
.|--+.|+.+|..+++.+..-.+++++|+.|+|...
T Consensus 37 keIV~~ELdNL~~ei~~~kikqDnl~~qv~eik~k~ 72 (75)
T PHA01750 37 KEIVNSELDNLKTEIEELKIKQDELSRQVEEIKRKL 72 (75)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 445578899999999999888999999988888654
No 40
>PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A ....
Probab=26.01 E-value=2.5e+02 Score=29.87 Aligned_cols=78 Identities=15% Similarity=0.280 Sum_probs=51.1
Q ss_pred ceeEEEEcccccccccCccccCCEEEEEecCCCccccccccccccceeEEeeccCCCCCCCCCCCcEEEEEeecCCCCCC
Q psy827 220 TSWKVTLFMEHRENQEEILKGGDVVRLFHAEQEKFLTMDEYKKKQHVFLRTTGRTSATSATSSKALWEIEVVQHDPCRGG 299 (2693)
Q Consensus 220 T~WkI~l~~~~~~~~~~~Lk~GDVIRLfH~E~~~~Lt~~~~~~~~~v~lr~~~~~~~~~~~s~~slW~IE~v~~~~~~Gg 299 (2693)
-.|++.+... .+....|....++.+|.+..-.......+ ..+ ...++.+-.|+|+...
T Consensus 3 Q~W~~~~~~~----------~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v--~~~---~~~~~~~Q~W~i~~~~------- 60 (105)
T PF14200_consen 3 QQWTFTPVGD----------SDGYYKIRNVNSGKYLDVAGGSTANGTNV--QQW---TCNGNDNQQWKIEPVG------- 60 (105)
T ss_dssp GEEEEEEEET----------TTTEEEEEETTTTEEEEEGCTTCSTTEBE--EEE---ESSSSGGGEEEEEEST-------
T ss_pred CEEEEEEecC----------CCCEEEEEECCCCCEEEeCCCCcCCCcEE--EEe---cCCCCcCcEEEEEEec-------
Confidence 4688866311 25678899999999999987432221111 111 1234677899999641
Q ss_pred CCccccceeEEEccCCcceeeeec
Q psy827 300 AGHWNCLFRFKHLATGHYLAAEID 323 (2693)
Q Consensus 300 ~v~w~~~fRLKHl~TG~YLa~~~~ 323 (2693)
+..|+|+...||++|.+...
T Consensus 61 ----~g~y~I~n~~s~~~Ldv~~~ 80 (105)
T PF14200_consen 61 ----DGYYRIRNKNSGKVLDVAGG 80 (105)
T ss_dssp ----TSEEEEEETSTTEEEEEGGG
T ss_pred ----CCeEEEEECCCCcEEEECCC
Confidence 12599999999999998643
No 41
>PF06459 RR_TM4-6: Ryanodine Receptor TM 4-6; InterPro: IPR009460 The release of Ca2+ ions from intracellular stores is a key step in a wide variety of cellular functions. In striated muscle, the release of Ca2+ from the sarcoplasmic reticulum (SR) leads to muscle contraction. Ca2+ release occurs through large, high-conductance Ca2+ release channels, also known as ryanodine receptors (RyRs) because they bind the plant alkaloid ryanodine with high affinity and specificity []. This region covers TM regions 4-6 of the ryanodine receptor 1 family.; GO: 0005219 ryanodine-sensitive calcium-release channel activity, 0006874 cellular calcium ion homeostasis, 0016021 integral to membrane
Probab=25.74 E-value=54 Score=41.23 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=28.3
Q ss_pred CchHHHHHhHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy827 2212 PALFWVSSYMSVWSNILFNCAVLINLIVAIFYPFP 2246 (2693)
Q Consensus 2212 ~~l~~~s~~~~lw~~i~f~lav~INlii~~fy~~~ 2246 (2693)
+++.+++|+.=..+-+++++|++||.|.+ ||+..
T Consensus 161 k~lnylARNFYNlr~lALflAFaINFILL-FYKVs 194 (274)
T PF06459_consen 161 KFLNYLARNFYNLRFLALFLAFAINFILL-FYKVS 194 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhc
Confidence 36788999988899999999999998764 67653
No 42
>PF08865 DUF1830: Domain of unknown function (DUF1830); InterPro: IPR014964 This group of short proteins is functionally uncharacterised.
Probab=23.92 E-value=45 Score=33.22 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=29.5
Q ss_pred HHhhccceEEEEEcC----CeeEEEEecccccccCCcHHHHHHh
Q psy827 2136 YYASHTAQIEIVRQD----RTLEQIVFPIPEICEYLTEDTKSKV 2175 (2693)
Q Consensus 2136 f~~~~Ta~IEIvR~d----~~LE~I~Fpi~~~c~~L~~e~K~~f 2175 (2693)
.|.+.|.++.|+|-. --+|||+||---++.-=+++.+.++
T Consensus 2 ~Y~N~T~~~qI~Ri~~~~~~y~ERVVFP~e~l~FeAp~~A~LEI 45 (68)
T PF08865_consen 2 CYVNDTSQMQILRIINIPNWYFERVVFPGERLLFEAPPEARLEI 45 (68)
T ss_pred eEECCCCcEEEEEEeCCCCceEEEEEcCCcEEEEEcCCCCEEEE
Confidence 478899999999965 2589999998776655455554443
No 43
>PF08454 RIH_assoc: RyR and IP3R Homology associated; InterPro: IPR013662 This eukaryotic domain is found in ryanodine receptors (RyR) and inositol 1, 4, 5-trisphosphate receptors (IP3R) which together form a superfamily of homotetrameric ligand-gated intracellular Ca2+ channels []. There seems to be no known function for this domain []. Also see the IP3-binding domain IPR000699 from INTERPRO and IPR003608 from INTERPRO.
Probab=23.47 E-value=2.1e+02 Score=31.33 Aligned_cols=78 Identities=26% Similarity=0.287 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCCCchhhhhHHHhhc-------chhhhhhhccCc--cCchhhhHHHHHHHHHHHHH
Q psy827 1233 YKKIQQILIRMNKLCISRATPLSPVKPRKHEQRLLRNVG-------VHTIVLDLLQVP--YDMKEDIRMNELMRLAHQFL 1303 (2693)
Q Consensus 1233 y~~~~~~l~~~~~~c~~~~~~~~~~k~~~~~Q~llrn~g-------~h~~vl~ll~~~--~~~~~d~~m~el~~~~~~fL 1303 (2693)
...+..++.-+.-+|-. -...-|+.+|.=. .-..+.+++..- +.+..+....+++..|+++|
T Consensus 7 ~~~~~~ilr~LQLlCEg---------hn~~lQnylR~Q~~~~~s~nlV~~~~~ll~~l~~~~~~~~~~~~~~~~q~~~tL 77 (109)
T PF08454_consen 7 MEIIQRILRFLQLLCEG---------HNLDLQNYLRQQPNNKNSYNLVSETVDLLDSLQEFGKDINSDNIELIIQCFDTL 77 (109)
T ss_pred HHHHHHHHHHHHHHHCc---------CCHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44466777777778832 1223355555322 223333444321 12233456678999999999
Q ss_pred HHHhcc-ChhhHHHHHH
Q psy827 1304 QNFCLG-NQQNQVLLHK 1319 (2693)
Q Consensus 1304 ~~Fc~~-N~~NQ~lL~~ 1319 (2693)
.-||.| +.+||..+.+
T Consensus 78 ~E~iQGPC~eNQ~~l~~ 94 (109)
T PF08454_consen 78 TEFIQGPCIENQIALAN 94 (109)
T ss_pred HHHHcCCCHHhHHHHHH
Confidence 999999 9999997763
Done!