RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8274
(228 letters)
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 124 bits (312), Expect = 2e-36
Identities = 121/228 (53%), Positives = 143/228 (62%), Gaps = 49/228 (21%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
AVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAGQEDYDRLRPLSY
Sbjct: 13 AVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSY 72
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ DVF +CFS+
Sbjct: 73 ------------------------------------------------PQTDVFLVCFSV 84
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
V+P+SFENV+ KW PE+ HHCP TP +LVGT++DLRDD TIEKL + K PIT
Sbjct: 85 VSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEK 144
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCVLL 228
+A+++ AVKY+ECSALTQKGLK VFDEAI A L P P K +RCVLL
Sbjct: 145 LARDLKAVKYVECSALTQKGLKNVFDEAILAALEP-PEPKKSRRCVLL 191
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 122 bits (306), Expect = 1e-35
Identities = 156/217 (71%), Positives = 163/217 (75%), Gaps = 48/217 (22%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP+NLGLWDTAGQEDYDRLRPLSY
Sbjct: 15 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSY 74
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ DV ICFSL
Sbjct: 75 ------------------------------------------------PQTDVSLICFSL 86
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
V+PASFENVRAKWYPEVRHHCP+TPIILVGTKLDLRDDK+TIEKLKEKKL PITYPQGL+
Sbjct: 87 VSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLA 146
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVP 217
MAKEIGAVKYLECSALTQ+GLKTVFDEAIRAVLCP P
Sbjct: 147 MAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPPP 183
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 117 bits (294), Expect = 1e-33
Identities = 107/215 (49%), Positives = 133/215 (61%), Gaps = 48/215 (22%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
AVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+DTAGQEDYDRLRPLSY
Sbjct: 19 AVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSY 78
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
DVF ICFS+
Sbjct: 79 ------------------------------------------------PMTDVFLICFSV 90
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
VNPASF+NV+ +W PE++ + P+ P +L+GT++DLRDD +T+ +L + K PI QG
Sbjct: 91 VNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQK 150
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCP 215
+AKEIGA Y+ECSALTQKGLKTVFDEAI A+L P
Sbjct: 151 LAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 110 bits (276), Expect = 3e-31
Identities = 91/213 (42%), Positives = 115/213 (53%), Gaps = 48/213 (22%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
A GKTCLLI + + FP Y+PTVF+NY A++ VDGK + L LWDTAG EDYDRLRPLSY
Sbjct: 12 ACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDRLRPLSY 71
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
DV +CFS+
Sbjct: 72 ------------------------------------------------PDTDVILMCFSI 83
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
+P S EN+ KW PEV+H CP+ PIILVG K DLR+D+ T +L + K P+ +G
Sbjct: 84 DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRD 143
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
MA IGA Y+ECSA T+ G++ VF+ A RA L
Sbjct: 144 MANRIGAFGYMECSAKTKDGVREVFEMATRAAL 176
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 108 bits (271), Expect = 2e-30
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 49/214 (22%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT LL + + FP Y+PTVF+NY+A+ +D + I L LWDT+G YD +RP
Sbjct: 12 QCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRP--- 68
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
D ICF +
Sbjct: 69 ---------------------------------------------LSYPDSDAVLICFDI 83
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
P + ++V KW E++ CP+T ++LVG K DLR D T+ +L + P++Y QG +
Sbjct: 84 SRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGAN 143
Query: 181 MAKEIGAVKYLECSALT-QKGLKTVFDEAIRAVL 213
MAK+IGA Y+ECSAL + ++ +F A A +
Sbjct: 144 MAKQIGAATYIECSALQSENSVRDIFHVATLACV 177
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 104 bits (259), Expect = 9e-29
Identities = 40/214 (18%), Positives = 76/214 (35%), Gaps = 63/214 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+CLL+ + + F +I T+ ++ V ++GK + L +WDTAGQE + +
Sbjct: 12 GVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAY 71
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + +
Sbjct: 72 YRGA------------------------------------------------MGIILVYD 83
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ + +F N++ + H ++LVG K D+ T + QG
Sbjct: 84 ITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTAD-------------QGE 130
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
++AKE+G + ++E SA + +F + +
Sbjct: 131 ALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQ 163
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 98.3 bits (244), Expect = 2e-26
Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGKTC+L ++ +AF +I T+ ++ + +DGK I L +WDTAGQE + +
Sbjct: 16 GVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 75
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + +
Sbjct: 76 YRGA------------------------------------------------MGIMLVYD 87
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ N SF+N+R H +++G K D+ D ++ ++ +G
Sbjct: 88 ITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKE------------RGE 135
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+A + G +K++E SA ++ F R +
Sbjct: 136 KLALDYG-IKFMETSAKANINVENAFFTLARDIK 168
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 96.8 bits (240), Expect = 9e-26
Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGKTCL+ +T FP T+ D V ++G+ + L +WDTAGQE + +
Sbjct: 15 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 74
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + + +
Sbjct: 75 YRSA------------------------------------------------NALILTYD 86
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ SF + ++ +LVG K+DL + + ++ +
Sbjct: 87 ITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR------------EVSQQRAE 134
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
++ + YLE SA ++ +F + ++
Sbjct: 135 EFSEAQD-MYYLETSAKESDNVEKLFLDLACRLI 167
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 92.2 bits (228), Expect = 7e-24
Identities = 41/214 (19%), Positives = 74/214 (34%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+CLL+ ++ + + +YI T+ ++ V +DGK + L +WDTAGQE + +
Sbjct: 16 GVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSY 75
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + I +
Sbjct: 76 YRGS------------------------------------------------HGIIIVYD 87
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ + SF V+ R+ + +LVG K DL+D + + +
Sbjct: 88 VTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAK------------ 135
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+ + +LE SAL ++ F R +
Sbjct: 136 -EFADANKMPFLETSALDSTNVEDAFLTMARQIK 168
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 91.5 bits (226), Expect = 7e-24
Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 62/213 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDN-YSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+CLL +T F + T+ + + V G+ I L +WDTAGQE + +
Sbjct: 14 GVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSY 73
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + +
Sbjct: 74 YRGA------------------------------------------------AGALMVYD 85
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ +++ ++ + P+T IIL+G K DL ++ + +
Sbjct: 86 ITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYE------------EAK 133
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
A+E G +LE SA T + ++ F EA + +
Sbjct: 134 QFAEENGL-LFLEASAKTGENVEDAFLEAAKKI 165
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 88.0 bits (217), Expect = 2e-22
Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
+VGKT L Y ++F ++ TV ++ + + K I L +WDTAGQE Y +
Sbjct: 15 SVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAY 74
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y F + +
Sbjct: 75 YRGA------------------------------------------------MGFILMYD 86
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ N SF V+ + + ++LVG K D+ D++ ++ +G
Sbjct: 87 ITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER------------VVSSERGR 134
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+A +G ++ E SA +K F+ + +
Sbjct: 135 QLADHLGF-EFFEASAKDNINVKQTFERLVDVIC 167
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 87.7 bits (216), Expect = 3e-22
Identities = 40/214 (18%), Positives = 71/214 (33%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
GK+CLL + F + T+ + S + V GK + L +WDTAGQE + +
Sbjct: 15 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 74
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + + +
Sbjct: 75 Y------------------------------------------------RGAAGALLVYD 86
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ + ++ + + IIL G K DL D+ +T+ +
Sbjct: 87 ITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADR------------EVTFLEAS 134
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
A+E + +LE SALT + ++ F + R +L
Sbjct: 135 RFAQENE-LMFLETSALTGENVEEAFVQCARKIL 167
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 85.3 bits (210), Expect = 2e-21
Identities = 43/214 (20%), Positives = 67/214 (31%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFD-NYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+ LL +T N F E T+ + ++ VDGK I +WDTAGQE Y R+
Sbjct: 14 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAY 73
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + + +
Sbjct: 74 Y------------------------------------------------RGAVGALLVYD 85
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ ++ENV H + I+LVG K DLR +
Sbjct: 86 IAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAF---------- 135
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
E + ++E SAL ++ F + +
Sbjct: 136 ---AEKNNLSFIETSALDSTNVEEAFKNILTEIY 166
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 84.6 bits (208), Expect = 3e-21
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L + + T F +Y PT+ D Y + VD P L + DTAG E + +R L
Sbjct: 13 GVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYI 72
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
K F + +SL
Sbjct: 73 ------------------------------------------------KNGQGFILVYSL 84
Query: 121 VNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
VN SF++++ +R P+ILVG K+DL ++E +G
Sbjct: 85 VNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSS------------EGR 132
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
++A+E G ++E SA ++ + +F E +R +
Sbjct: 133 ALAEEWGC-PFMETSAKSKTMVDELFAEIVRQMN 165
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 84.5 bits (208), Expect = 4e-21
Identities = 45/214 (21%), Positives = 77/214 (35%), Gaps = 63/214 (29%)
Query: 1 AVGKTCLLISYTTNAF-PGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQEDYDRLRPL 58
VGKTCLL+ + AF G +I TV ++ + + VDG + L +WDTAGQE + +
Sbjct: 16 GVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHA 75
Query: 59 SYPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICF 118
Y + +
Sbjct: 76 YYRDA------------------------------------------------HALLLLY 87
Query: 119 SLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQG 178
+ N ASF+N++A + ++L+G K+D ++ + G
Sbjct: 88 DVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHER------------VVKREDG 135
Query: 179 LSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
+AKE G + ++E SA T + F + +
Sbjct: 136 EKLAKEYG-LPFMETSAKTGLNVDLAFTAIAKEL 168
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 84.5 bits (208), Expect = 4e-21
Identities = 40/214 (18%), Positives = 75/214 (35%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+CLL+ +T F + T+ + A ++ +DGK I L +WDTAGQE + +
Sbjct: 13 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSY 72
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + +
Sbjct: 73 YRGA------------------------------------------------AGALLVYD 84
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ +F ++ + +H + I+L+G K DL ++ + +G
Sbjct: 85 ITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKRE------------EGE 132
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+ A+E G ++E SA T ++ F + +
Sbjct: 133 AFAREHGL-IFMETSAKTACNVEEAFINTAKEIY 165
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 83.8 bits (206), Expect = 7e-21
Identities = 47/219 (21%), Positives = 79/219 (36%), Gaps = 68/219 (31%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+ L+ Y TN F + T+ + + VDG + + +WDTAGQE + LR
Sbjct: 16 GVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPF 75
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y D + FS
Sbjct: 76 YRG------------------------------------------------SDCCLLTFS 87
Query: 120 LVNPASFENVRAKWYPEVRHHC-----PSTPIILVGTKLDLRDDKETIEKLKEKKLAPIT 174
+ + SF+N+ W E ++ S P +++G K+D+ + + + E
Sbjct: 88 VDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTE----------- 135
Query: 175 YPQGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+ + ++ G Y E SA + F+EA+R VL
Sbjct: 136 --EAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 172
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 83.8 bits (206), Expect = 1e-20
Identities = 51/238 (21%), Positives = 80/238 (33%), Gaps = 79/238 (33%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV-----------DGKPINLGLWDTAGQ 49
VGKT L YT N F ++I TV ++ +V ++L LWDTAGQ
Sbjct: 15 GVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQ 74
Query: 50 EDYDRLRPLSYPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKK 109
E + L +
Sbjct: 75 ERFRSLTTAFFRDA---------------------------------------------- 88
Query: 110 RCDVFQICFSLVNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEK 168
F + F L + SF NVR + C + I+L+G K DL D +E E
Sbjct: 89 --MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNE----- 141
Query: 169 KLAPITYPQGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCV 226
Q +A + G + Y E SA T + ++ + + ++ + ++CV
Sbjct: 142 -------RQARELADKYG-IPYFETSAATGQNVEKAVETLLDLIM------KRMEQCV 185
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 83.1 bits (204), Expect = 1e-20
Identities = 43/213 (20%), Positives = 69/213 (32%), Gaps = 62/213 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
+VGKT L+ + ++F Y T+ D S + ++ + I L LWDTAGQE + L P
Sbjct: 10 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSY 69
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
+ +
Sbjct: 70 IRD------------------------------------------------SAAAVVVYD 81
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ N SF+ I+LVG K DL D ++ + E+
Sbjct: 82 ITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER----------- 130
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
AKE+ ++E SA +K +F A+
Sbjct: 131 -KAKELNV-MFIETSAKAGYNVKQLFRRVAAAL 161
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 81.4 bits (200), Expect = 6e-20
Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+ LL+ +T + F E T+ D + VDG L +WDTAGQE + L P
Sbjct: 17 GVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSY 76
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + + +
Sbjct: 77 Y------------------------------------------------RGAQGVILVYD 88
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ +F + + + + ++ ++++E + +GL
Sbjct: 89 VTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENRE------------VDRNEGL 136
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
A++ + ++E SA T G++ F+E + ++
Sbjct: 137 KFARKHS-MLFIEASAKTCDGVQCAFEELVEKII 169
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 77.7 bits (190), Expect = 1e-18
Identities = 42/214 (19%), Positives = 81/214 (37%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGKT L++ Y N F ++I T+ ++ + + GK +NL +WDTAGQE + L P+
Sbjct: 13 CVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 72
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + + +
Sbjct: 73 YRD------------------------------------------------SNGAILVYD 84
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ + SF+ V+ + + +VG K+DL ++ ++ +
Sbjct: 85 ITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKER------------HVSIQEAE 132
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
S A+ +GA K+ SA KG++ +F + + ++
Sbjct: 133 SYAESVGA-KHYHTSAKQNKGIEELFLDLCKRMI 165
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 77.7 bits (190), Expect = 1e-18
Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 61/213 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L + + F +Y PT+ D+Y V VD + L + DTAG E + +R L
Sbjct: 13 GVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYM 72
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
K F + +S+
Sbjct: 73 ------------------------------------------------KNGQGFALVYSI 84
Query: 121 VNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
++F +++ +R P+ILVG K DL D++ + QG
Sbjct: 85 TAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDER------------VVGKEQGQ 132
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
++A++ +LE SA ++ + +F + +R +
Sbjct: 133 NLARQWCNCAFLESSAKSKINVNEIFYDLVRQI 165
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 75.0 bits (183), Expect = 1e-17
Identities = 49/214 (22%), Positives = 79/214 (36%), Gaps = 63/214 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L I N F EY PT+ D+Y V++DG+ L + DTAGQE+Y +R
Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYM 72
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ + F F++
Sbjct: 73 ------------------------------------------------RTGEGFLCVFAI 84
Query: 121 VNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
N SFE++ R P++LVG K DL + ++
Sbjct: 85 NNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQD------------ 132
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+A+ G + Y+E SA T++G++ F +R +
Sbjct: 133 -LARSYG-IPYIETSAKTRQGVEDAFYTLVREIR 164
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 72.7 bits (177), Expect = 1e-16
Identities = 38/214 (17%), Positives = 66/214 (30%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
AVGK+ L++ + F T+ + V +D + +WDTAGQE Y L P+
Sbjct: 16 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 75
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + +
Sbjct: 76 YRG------------------------------------------------AQAAIVVYD 87
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ N SF + R P+ I L G K DL + + + + +
Sbjct: 88 ITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKR------------AVDFQEAQ 135
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
S A + + ++E SA T + +F + +
Sbjct: 136 SYADDNS-LLFMETSAKTSMNVNEIFMAIAKKLP 168
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 71.9 bits (175), Expect = 2e-16
Identities = 44/215 (20%), Positives = 78/215 (36%), Gaps = 64/215 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L + + + F +Y PT D+Y V++DG+ + + + DTAGQEDY +R +
Sbjct: 14 GVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYF 73
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ + F FS
Sbjct: 74 ------------------------------------------------RSGEGFLCVFS- 84
Query: 121 VNPASFENVRAKWYPEVR--HHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQG 178
+ A + ++ + P +LVG K DL D + ++ +
Sbjct: 85 ITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKR------------QVSVEEA 132
Query: 179 LSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+ A + V Y+E SA T+ + VF + +R +
Sbjct: 133 KNRADQWN-VNYVETSAKTRANVDKVFFDLMREIR 166
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 72.0 bits (175), Expect = 2e-16
Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 65/219 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANV--MVDGKPINLGLWDTAGQEDYDRLRPL 58
VGKT L+ Y + + +Y T+ ++ + K + +WDTAGQE + L
Sbjct: 12 GVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVA 71
Query: 59 SYPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICF 118
Y + D + +
Sbjct: 72 FY------------------------------------------------RGADCCVLVY 83
Query: 119 SLVNPASFENVRAKWYPEVRH----HCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPIT 174
+ N +SFEN+++ + H + P +++G K+D + K+ ++
Sbjct: 84 DVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKK-----------IVS 132
Query: 175 YPQGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+AK +G + SA + T F+E R+ L
Sbjct: 133 EKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSAL 171
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 72.0 bits (175), Expect = 2e-16
Identities = 45/214 (21%), Positives = 75/214 (35%), Gaps = 62/214 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L I + + F +Y PT+ D+Y+ VDG P L + DTAGQE++ +R
Sbjct: 16 GVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYM 75
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ F + F++
Sbjct: 76 ------------------------------------------------RAGHGFLLVFAI 87
Query: 121 VNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ SF V + +R P++LVG K DL ++ + +
Sbjct: 88 NDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQ------------VPRSEAS 135
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+ V Y E SA + + F++ +RAV
Sbjct: 136 AFGASHH-VAYFEASAKLRLNVDEAFEQLVRAVR 168
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 66.6 bits (161), Expect = 2e-14
Identities = 39/213 (18%), Positives = 67/213 (31%), Gaps = 59/213 (27%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG-KPINLGLWDTAGQEDYDRLRPLS 59
AVGK+ +++ + +N F PT+ + + + +WDTAGQE + L P+
Sbjct: 13 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMY 72
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + +
Sbjct: 73 YRN------------------------------------------------AQAALVVYD 84
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ P SF R I LVG K+D+ + + +E +G
Sbjct: 85 VTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVARE---------EGE 135
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
+A+E G + E SA T + + VF +
Sbjct: 136 KLAEEKGL-LFFETSAKTGENVNDVFLGIGEKI 167
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 65.8 bits (159), Expect = 4e-14
Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 64/215 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L I + + F +Y PT+ D+Y+ ++D + L + DTAGQE++ +R
Sbjct: 15 GVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMRE--- 71
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ + F + FS+
Sbjct: 72 ---------------------------------------------QYMRTGEGFLLVFSV 86
Query: 121 VNPASFENVRAKWYPEVRHHC--PSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQG 178
+ SFE + K+ ++ P+IL+G K DL + +T +G
Sbjct: 87 TDRGSFEEIY-KFQRQILRVKDRDEFPMILIGNKADLDHQR------------QVTQEEG 133
Query: 179 LSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+A+++ Y+E SA + + F E +R +
Sbjct: 134 QQLARQLKV-TYMEASAKIRMNVDQAFHELVRVIR 167
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 65.8 bits (159), Expect = 4e-14
Identities = 34/213 (15%), Positives = 65/213 (30%), Gaps = 62/213 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLG-LWDTAGQEDYDRLRPLS 59
VGK+ ++ + ++F PT+ ++ + ++ +WDTAG E + L P+
Sbjct: 14 GVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMY 73
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + I +
Sbjct: 74 Y------------------------------------------------RGSAAAIIVYD 85
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ +F ++ +H PS + + G K DL D + +
Sbjct: 86 ITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVR------------EVMERDAK 133
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
A I A ++E SA + +F E R +
Sbjct: 134 DYADSIHA-IFVETSAKNAININELFIEISRRI 165
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 64.2 bits (155), Expect = 2e-13
Identities = 35/212 (16%), Positives = 62/212 (29%), Gaps = 59/212 (27%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L++ + F YIPTV D Y + D L + DT G + ++ LS
Sbjct: 12 GVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSI 71
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ + +
Sbjct: 72 SKG----------------------------------------------HAFILVYSITS 85
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
+ E++ S PI+LVG K D + + + +
Sbjct: 86 RQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSR------------EVQSSEAEA 133
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
+A+ ++E SA +K +F E +
Sbjct: 134 LARTWKC-AFMETSAKLNHNVKELFQELLNLE 164
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 59.7 bits (143), Expect = 7e-12
Identities = 49/215 (22%), Positives = 78/215 (36%), Gaps = 63/215 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L I + F +Y PT+ D+Y + +D + L + DTAGQE++ +R
Sbjct: 14 GVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYM 73
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ D F I +S+
Sbjct: 74 ------------------------------------------------RTGDGFLIVYSV 85
Query: 121 VNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ ASFE+V +R S P+ILV K+DL + +T QG
Sbjct: 86 TDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLR------------KVTRDQGK 133
Query: 180 SMAKEIGAVKYLECSALTQK-GLKTVFDEAIRAVL 213
MA + + Y+E SA + F + +R +
Sbjct: 134 EMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIR 167
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 58.2 bits (139), Expect = 3e-11
Identities = 35/218 (16%), Positives = 66/218 (30%), Gaps = 66/218 (30%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV-DGKPINLGLWDTAGQEDYDRLRPLS 59
VGKT L+ Y F +Y T+ ++ ++ D + + + +WDTAGQE
Sbjct: 12 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER-------- 63
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
V + D + F
Sbjct: 64 ----------------------------------------FQSLGVAFYRGADCCVLVFD 83
Query: 120 LVNPASFENVRAKWYPEVRHHCP----STPIILVGTKLDLRDDKETIEKLKEKKLAPITY 175
+ P +F+ + + + P + P +++G K+DL + +
Sbjct: 84 VTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENR-------------QVAT 130
Query: 176 PQGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+ + + Y E SA ++ F R L
Sbjct: 131 KRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 168
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 55.8 bits (133), Expect = 2e-10
Identities = 26/212 (12%), Positives = 45/212 (21%), Gaps = 61/212 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
A GKT +L E + T+ V+ K I+ +WD GQ+ L +
Sbjct: 10 AAGKTTILYKLKLG----EIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF 65
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+
Sbjct: 66 ------------------------------------------------QNTQGLIFVVDS 77
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
+ R + + ++LV + + IT GL
Sbjct: 78 NDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAE--------ITDKLGLH 129
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
+ A + GL D +
Sbjct: 130 SLRHRN-WYIQATCATSGDGLYEGLDWLSNQL 160
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 55.8 bits (133), Expect = 2e-10
Identities = 44/215 (20%), Positives = 75/215 (34%), Gaps = 64/215 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L++ + T F EY PT+ Y +D + +++ + DTAGQED +
Sbjct: 12 GVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDTIQREGHMR 71
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ F + + +
Sbjct: 72 W-------------------------------------------------GEGFVLVYDI 82
Query: 121 VNPASFEN-VRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ SFE + K + + +ILVG K DL + ++ +G
Sbjct: 83 TDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSR------------QVSTEEGE 130
Query: 180 SMAKEIGAVKYLECSALTQKG-LKTVFDEAIRAVL 213
+A E+ + ECSA T +G + +F E R V
Sbjct: 131 KLATELAC-AFYECSACTGEGNITEIFYELCREVR 164
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 55.0 bits (131), Expect = 3e-10
Identities = 39/214 (18%), Positives = 73/214 (34%), Gaps = 65/214 (30%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
GKT + + T F +Y+ T+ + + + PI +WDTAGQE + LR
Sbjct: 13 GTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGY 72
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y Q I F
Sbjct: 73 YIQ------------------------------------------------AQCAIIMFD 84
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ + +++NV W+ ++ C + PI+L G K+D++D K + +
Sbjct: 85 VTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIKDRK--------------VKAKSI 129
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
++ ++Y + SA + + F R ++
Sbjct: 130 VFHRKKN-LQYYDISAKSNYNFEKPFLWLARKLI 162
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 51.6 bits (122), Expect = 5e-09
Identities = 42/214 (19%), Positives = 68/214 (31%), Gaps = 63/214 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQEDYDRLRPLS 59
AVGK+ ++ Y F +Y T+ ++ + V+ + + L LWDTAGQE++D +
Sbjct: 12 AVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAY 71
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + + FS
Sbjct: 72 Y------------------------------------------------RGAQACVLVFS 83
Query: 120 LVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ SFE + W +V P LV K+DL DD I +
Sbjct: 84 TTDRESFEAIS-SWREKVVAEVGDIPTALVQNKIDLLDDS------------CIKNEEAE 130
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+AK + ++ S + VF L
Sbjct: 131 GLAKRLKL-RFYRTSVKEDLNVSEVFKYLAEKHL 163
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 51.2 bits (121), Expect = 8e-09
Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 3/106 (2%)
Query: 110 RCDVFQICFSLVNPASFENVRAKWYPEVRHHCPST-PIILVGTKLDLRDDKETIEKLKEK 168
+ + + + + + PI+++G K+D + +
Sbjct: 80 AINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMF 139
Query: 169 KLAPITYPQGLSMAKEIGA--VKYLECSALTQKGLKTVFDEAIRAV 212
L T +G KE+ A ++ CS L ++G F + +
Sbjct: 140 GLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 185
Score = 30.8 bits (68), Expect = 0.084
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 61 PQTGLSMAKEIGA--VKYLECSALTQKGLKTVFDEAIRAV 98
G KE+ A ++ CS L ++G F + +
Sbjct: 146 TGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 185
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 49.6 bits (117), Expect = 2e-08
Identities = 42/212 (19%), Positives = 60/212 (28%), Gaps = 65/212 (30%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDN-YSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGKTCL + FP T+ + V +DG+ I + LWDTAGQE + +
Sbjct: 12 NVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQH 71
Query: 60 YPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFS 119
Y + +
Sbjct: 72 YYRN-----------------------------------------------VHAVVFVYD 84
Query: 120 LVNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQG 178
+ N ASF ++ A +H P ILVG K DLR +
Sbjct: 85 MTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTD------------LA 132
Query: 179 LSMAKEIGAVKYLECSALTQK---GLKTVFDE 207
A E SA ++ +F
Sbjct: 133 QKFADTHSM-PLFETSAKNPNDNDHVEAIFMT 163
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 48.8 bits (115), Expect = 7e-08
Identities = 26/213 (12%), Positives = 45/213 (21%), Gaps = 63/213 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT +L PT+ N + K + L +WD GQ Y
Sbjct: 27 GAGKTTILYRLQIGEVV-TTKPTIGFNV---ETLSYKNLKLNVWDLGGQTSIRPYWRCYY 82
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
Sbjct: 83 ------------------------------------------------ADTAAVIFVVDS 94
Query: 121 VNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ + + ++ +++ K D E KE L
Sbjct: 95 TDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKE---------LNL 145
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
K+ + SA+ +G+ D I +
Sbjct: 146 VELKDRS-WSIVASSAIKGEGITEGLDWLIDVI 177
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 48.4 bits (114), Expect = 1e-07
Identities = 26/227 (11%), Positives = 54/227 (23%), Gaps = 57/227 (25%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GK+ + +PT D + + + D GQ R +
Sbjct: 12 ESGKSTFIKQMRIIHG--SGVPTTGIIE---YPFDLQSVIFRMVDVGGQRSERRKWIHCF 66
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ + D +
Sbjct: 67 ENV------------------------------------TSIMFLVALSEYDQVLVESDN 90
Query: 121 VNPASFENVRAKWYPEVRHHC-PSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
N E +A + + + ++ +IL K DL ++K L + +
Sbjct: 91 ENR--MEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDA 148
Query: 180 SMAKEIGAVKYL-------------ECSALTQKGLKTVFDEAIRAVL 213
A+E ++ A + ++ VF +L
Sbjct: 149 QAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTIL 195
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 48.0 bits (113), Expect = 1e-07
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 11/105 (10%)
Query: 109 KRCDVFQICFSLVNPASFENVRAKWYPEVRHHCPST-PIILVGTKLDLRDDKETIEKLKE 167
+ D+ + FE + + S P+++ K DL E
Sbjct: 82 ENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASE---- 137
Query: 168 KKLAPITYPQGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
I L ++ + CSALT +G++ + + V
Sbjct: 138 -----IAEGLNLHTIRDRV-WQIQSCSALTGEGVQDGMNWVCKNV 176
Score = 30.7 bits (68), Expect = 0.096
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 64 GLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 98
L ++ + CSALT +G++ + + V
Sbjct: 143 NLHTIRDRV-WQIQSCSALTGEGVQDGMNWVCKNV 176
Score = 25.3 bits (54), Expect = 4.8
Identities = 7/29 (24%), Positives = 9/29 (31%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYS 29
GKT LL + F+ S
Sbjct: 26 NAGKTTLLKQLASEDISHITPTQGFNIKS 54
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 47.0 bits (110), Expect = 2e-07
Identities = 24/210 (11%), Positives = 52/210 (24%), Gaps = 60/210 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT + + F + IPTV N + + + LWD GQ +
Sbjct: 12 YSGKTTFVNVIASGQFNEDMIPTVGFNM---RKITKGNVTIKLWDIGGQPRF-------- 60
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ + + + +
Sbjct: 61 ---------------------------------------RSMWERYCRGVSAIVYMVDAA 81
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
+ + P++++G K DL + E +++ LS
Sbjct: 82 DQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEK---------MNLS 132
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFDEAIR 210
++ + S + + I+
Sbjct: 133 AIQDRE-ICCYSISCKEKDNIDITLQWLIQ 161
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 45.9 bits (107), Expect = 5e-07
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRP 57
+VGK+ L I + F Y PT+ + ++ + V+G+ +L L DTAGQ++Y
Sbjct: 14 SVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQ 70
Score = 37.8 bits (86), Expect = 3e-04
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 44 WDTAGQEDYDRLRPLSYPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 98
G + + + + G ++A+ A +LE SA + VF I
Sbjct: 112 IMLVGNKKDLHMERVISYEEGKALAESWNA-AFLESSAKENQTAVDVFRRIILEA 165
Score = 37.4 bits (85), Expect = 4e-04
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
+A+ A +LE SA + VF I
Sbjct: 135 LAESWNA-AFLESSAKENQTAVDVFRRIILEA 165
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 45.5 bits (106), Expect = 7e-07
Identities = 22/206 (10%), Positives = 41/206 (19%), Gaps = 54/206 (26%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT LL + PT + I +D G RL +
Sbjct: 10 NAGKTTLLHMLKNDRLA-TLQPTWHPTS---EELAIGNIKFTTFDLGGHIQARRLWKDYF 65
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+
Sbjct: 66 ------------------------------------------------PEVNGIVFLVDA 77
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
+P F+ R + ++ + + +L+ + G
Sbjct: 78 ADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSAL--GLLNTTGSQ 135
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFD 206
+ V+ CS + + G F
Sbjct: 136 RIEGQRPVEVFMCSVVMRNGYLEAFQ 161
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 45.5 bits (106), Expect = 7e-07
Identities = 32/215 (14%), Positives = 58/215 (26%), Gaps = 61/215 (28%)
Query: 1 AVGKTCLLISYTTN--AFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPL 58
VGK+ L + + + D Y +MVDG+ + L D + +
Sbjct: 13 GVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENKGEN----- 67
Query: 59 SYPQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICF 118
+ + +
Sbjct: 68 -----------------------------------------EWLHDHCMQVGDAYLIVYS 86
Query: 119 SLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQG 178
+ + + PIILVG K DL + ++ +G
Sbjct: 87 ITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCR------------EVSVSEG 134
Query: 179 LSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+ A K++E SA Q +K +F+ +R V
Sbjct: 135 RACAVVFDC-KFIETSAAVQHNVKELFEGIVRQVR 168
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 44.9 bits (105), Expect = 1e-06
Identities = 27/207 (13%), Positives = 44/207 (21%), Gaps = 63/207 (30%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
A GKT +L F+ V K + +WD GQ+ L Y
Sbjct: 22 AAGKTTILYKLKLGQSVTTIPTVGFNVE----TVTYKNVKFNVWDVGGQDKIRPLWRHYY 77
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
Sbjct: 78 TG------------------------------------------------TQGLIFVVDC 89
Query: 121 VNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ + R + + + I++ K DL D + E I GL
Sbjct: 90 ADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHE---------IQEKLGL 140
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFD 206
+ ++ A + GL
Sbjct: 141 TRIRDRN-WYVQPSCATSGDGLYEGLT 166
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 45.0 bits (105), Expect = 1e-06
Identities = 29/213 (13%), Positives = 53/213 (24%), Gaps = 63/213 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT +L ++ N E + T S + +WD GQE Y
Sbjct: 25 NAGKTTILYQFSMN----EVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYY 80
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ +
Sbjct: 81 ------------------------------------------------TNTEFVIVVVDS 92
Query: 121 VNPASFENVRAKWYPEVRHHCPSTP-IILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ R + Y + H +++ K D+++ E I+ L
Sbjct: 93 TDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAE---------ISQFLKL 143
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
+ K+ C ALT +GL + + +
Sbjct: 144 TSIKDHQ-WHIQACCALTGEGLCQGLEWMMSRL 175
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 42.7 bits (99), Expect = 8e-06
Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 111 CDVFQICFSLVNPASFENVRAKWYPEVRHHCP---STPIILVGTKLDLRDDKETIEKLKE 167
D FSL + SF+ V + LVGT+ +
Sbjct: 71 ADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPR------ 124
Query: 168 KKLAPITYPQGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
+ + ++ ++ Y E A + VF E + V+
Sbjct: 125 ----VVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVV 166
Score = 42.7 bits (99), Expect = 8e-06
Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 3/67 (4%)
Query: 33 MVDGKPINLGLWDTAGQEDYDRLRPLSYPQTGLSMAKEIGAVKYLECSALTQKGLKTVFD 92
G + L R+ ++ ++ Y E A + VF
Sbjct: 103 GRGGLALALVGTQDRISASSPRVV---GDARARALCADMKRCSYYETCATYGLNVDRVFQ 159
Query: 93 EAIRAVL 99
E + V+
Sbjct: 160 EVAQKVV 166
Score = 38.4 bits (88), Expect = 2e-04
Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTA 47
GK+ L+ + T ++ T + Y ++VDG+ + + + A
Sbjct: 15 RSGKSSLIHRFLTGSYQ-VLEKTESEQYKKEMLVDGQTHLVLIREEA 60
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 41.2 bits (95), Expect = 2e-05
Identities = 24/213 (11%), Positives = 50/213 (23%), Gaps = 63/213 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT +L + PT+ N ++ + L +WD GQ+ +
Sbjct: 12 NAGKTTILKKFNGEDVD-TISPTLGFNI---KTLEHRGFKLNIWDVGGQKSLRSYWRNYF 67
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ D
Sbjct: 68 ------------------------------------------------ESTDGLIWVVDS 79
Query: 121 VNPASFENVRAKWYPEVRH-HCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ ++ + + + +++ K DL + +L I
Sbjct: 80 ADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHH-- 137
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
+ CSA+T + L D + +
Sbjct: 138 --------WRIQGCSAVTGEDLLPGIDWLLDDI 162
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 40.9 bits (94), Expect = 3e-05
Identities = 31/213 (14%), Positives = 56/213 (26%), Gaps = 61/213 (28%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L + G Y +++VDG+ +L ++D Q+ L
Sbjct: 11 GVGKSALARIFGGVED-GPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLPGHCM 69
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+
Sbjct: 70 AMG-----------------------------------------------DAYVIVYSVT 82
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
+ + + PIILVG K DL +E +G +
Sbjct: 83 DKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVD------------EGRA 130
Query: 181 MAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 213
A K++E SA ++ +F+ +R +
Sbjct: 131 CAVVFDC-KFIETSAALHHNVQALFEGVVRQIR 162
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 40.7 bits (94), Expect = 4e-05
Identities = 25/227 (11%), Positives = 46/227 (20%), Gaps = 60/227 (26%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GK+ ++ G I K ++ ++D GQ + +
Sbjct: 12 ESGKSTIVKQMKIIHEAGTGIVE--------THFTFKDLHFKMFDVGGQRSERKKWIHCF 63
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ D +
Sbjct: 64 EGV---------------------TAIIFCVA-----------------LSDYDLVLAED 85
Query: 121 VNPASFENVRAKWYPEVRHHCPS-TPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ + + T IIL K DL ++K L
Sbjct: 86 EEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYE 145
Query: 180 SMAKEIGA-------------VKYLECSALTQKGLKTVFDEAIRAVL 213
A I + A K ++ VFD ++
Sbjct: 146 EAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVII 192
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 39.3 bits (90), Expect = 1e-04
Identities = 22/213 (10%), Positives = 43/213 (20%), Gaps = 63/213 (29%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT +L E + T+ V K + +WD G
Sbjct: 15 GAGKTTILYRLQVG----EVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIRP------ 64
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
D
Sbjct: 65 ------------------------------------------YWRCYYSNTDAVIYVVDS 82
Query: 121 VNPASFENVRAKWYPEVRHH-CPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGL 179
+ +++ + +++ K D+ + E GL
Sbjct: 83 CDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANS---------LGL 133
Query: 180 SMAKEIGAVKYLECSALTQKGLKTVFDEAIRAV 212
K+ + + SA GL + + +
Sbjct: 134 PALKDRK-WQIFKTSATKGTGLDEAMEWLVETL 165
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 38.5 bits (88), Expect = 2e-04
Identities = 29/236 (12%), Positives = 61/236 (25%), Gaps = 76/236 (32%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT L + T + + ++ D+ + + + + +L L D G E +
Sbjct: 10 DSGKTLLFVRLLTGQYR-DTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRFQLLDRF 68
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
K
Sbjct: 69 -----------------------------------------------KSSARAVVFVVDS 81
Query: 121 VNPASFENVRAKWYPEVRHHCPST----PIILVGTKLDLRDDK--ETIEKLKEKKLAPIT 174
A++ +V + +++ K D+ K + I++ EK+L +
Sbjct: 82 AAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKLIQQQLEKELNTLR 141
Query: 175 YPQGLSMAKEIGA----------------------VKYLECSALTQKGLKTVFDEA 208
+ + + + V++LECSA +G D
Sbjct: 142 VTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGGRGDTGSADIQ 197
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 35.3 bits (80), Expect = 0.003
Identities = 30/227 (13%), Positives = 59/227 (25%), Gaps = 57/227 (25%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GK+ L PT + + K + + D GQ + +
Sbjct: 12 ESGKSTFLKQMR---IIHGQDPTKGIHE---YDFEIKNVPFKMVDVGGQRSERKRWFECF 65
Query: 61 PQTGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVPTVPKKKRCDVFQICFSL 120
+ + + + + I ++
Sbjct: 66 DSV---------------------TSILFLVSSSEFDQVLMEDRQTNRLTE-SLNIFETI 103
Query: 121 VNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPITYPQGLS 180
VN F NV IIL K DL ++K + +K+ L P L
Sbjct: 104 VNNRVFSNV---------------SIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLR 148
Query: 181 MAKEIGAVKYL--------------ECSALTQKGLKTVFDEAIRAVL 213
++ + +A+ + ++ VF + +L
Sbjct: 149 DVQKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDTIL 195
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 32.0 bits (72), Expect = 0.035
Identities = 9/64 (14%), Positives = 17/64 (26%), Gaps = 9/64 (14%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
GK+ ++ + T +N ++D GQ D R
Sbjct: 16 ESGKSTIVKQMRIL----HVVLTSGIFETK----FQVDKVNFHMFDVGGQRDERRKWIQC 67
Query: 60 YPQT 63
+
Sbjct: 68 FNDV 71
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis
aries) [TaxId: 9940]}
Length = 511
Score = 28.0 bits (62), Expect = 1.1
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 134 YPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKE 167
+ E R P + +L +KE +L+E
Sbjct: 390 FNEYRKRFGMKPY---TSFQELTGEKEMAAELEE 420
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 511
Score = 27.6 bits (61), Expect = 1.5
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 3/34 (8%)
Query: 134 YPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKE 167
E R P + +L +KE +LK
Sbjct: 391 LNEYRKRFSLKPY---TSFEELTGEKEMAAELKA 421
>d1v4ea_ a.128.1.1 (A:) Octoprenyl-diphosphate synthase {Thermotoga
maritima [TaxId: 2336]}
Length = 280
Score = 26.9 bits (58), Expect = 2.3
Identities = 11/79 (13%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 114 FQICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKKLAPI 173
+Q+ +++ A E + + ++++ S P++ + E + + + + +
Sbjct: 192 YQMFDDIMDFAGMEKIGKDGFLDLKNGVASFPLVTA-----MEKFPEARQMFENRDWSGL 246
Query: 174 TYPQGLSMAKEIGAVKYLE 192
+S +E G +K E
Sbjct: 247 -----MSFMREKGILKECE 260
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 26.5 bits (57), Expect = 2.8
Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 16/85 (18%)
Query: 145 PIILVGTKLDL---------RDDKETIEKLKEKKLAPITYPQGLSMAKEI------GAVK 189
I K+DL R E I+ L + + ++ V+
Sbjct: 159 TTIPALNKVDLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVR 218
Query: 190 YLECSALTQKGLKTVFDEAIRAVLC 214
L SA T++G + + C
Sbjct: 219 VLYLSAKTREGFEDLET-LAYEHYC 242
>d2j3sa2 b.1.18.10 (A:2149-2236) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 88
Score = 24.5 bits (53), Expect = 5.3
Identities = 3/21 (14%), Positives = 10/21 (47%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
++P ++ +V G+ +
Sbjct: 53 RFVPAEMGTHTVSVKYKGQHV 73
>d2bp3a1 b.1.18.10 (A:1863-1954) Filamin a {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 24.5 bits (53), Expect = 5.6
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y+P + +YS V + + +
Sbjct: 61 SYLPVLPGDYSILVKYNEQHV 81
>d1vkra_ c.44.2.1 (A:) PTS system mannitol-specific EIICBA component
{Escherichia coli [TaxId: 562]}
Length = 97
Score = 24.3 bits (53), Expect = 5.7
Identities = 6/35 (17%), Positives = 9/35 (25%)
Query: 135 PEVRHHCPSTPIILVGTKLDLRDDKETIEKLKEKK 169
P I + LD E+L +
Sbjct: 61 ERAMRQVPQAQHISLTNFLDSGLYTSLTERLVAAQ 95
>d2di8a1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 24.2 bits (52), Expect = 6.7
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y PTV Y + + +
Sbjct: 62 SYFPTVPGVYIVSTKFADEHV 82
>d2d7na1 b.1.18.10 (A:8-87) Filamin C {Human (Homo sapiens)
[TaxId: 9606]}
Length = 80
Score = 23.6 bits (51), Expect = 7.8
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y PT + + DG I
Sbjct: 44 RYAPTEKGLHQMGIKYDGNHI 64
>d2diba1 b.1.18.10 (A:8-122) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 115
Score = 24.1 bits (52), Expect = 8.8
Identities = 7/21 (33%), Positives = 8/21 (38%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
EY P + V D PI
Sbjct: 79 EYTPFEKGLHVVEVTYDDVPI 99
>d2diaa1 b.1.18.10 (A:8-107) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 24.2 bits (52), Expect = 8.8
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y+P Y+ + G+ +
Sbjct: 64 TYVPLTAGMYTLTMKYGGELV 84
>d2dica1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 23.7 bits (51), Expect = 9.5
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
EYIP +Y N+ G I
Sbjct: 62 EYIPFAPGDYDVNITYGGAHI 82
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.417
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 870,979
Number of extensions: 40010
Number of successful extensions: 297
Number of sequences better than 10.0: 1
Number of HSP's gapped: 265
Number of HSP's successfully gapped: 178
Length of query: 228
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 146
Effective length of database: 1,281,736
Effective search space: 187133456
Effective search space used: 187133456
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.1 bits)