Query psy8280
Match_columns 158
No_of_seqs 102 out of 1305
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 23:28:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8280.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8280hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 9.8E-25 3.4E-29 176.8 12.7 125 27-154 28-154 (510)
2 2ks9_A Substance-P receptor; w 99.9 4.2E-23 1.4E-27 159.5 16.7 140 1-146 1-141 (364)
3 2rh1_A Beta-2-adrenergic recep 99.9 3E-23 1E-27 167.5 11.1 120 27-152 36-155 (500)
4 1u19_A Rhodopsin; G protein-co 99.9 3.3E-22 1.1E-26 153.2 15.0 114 28-147 35-148 (349)
5 3uon_A Human M2 muscarinic ace 99.9 2.2E-22 7.6E-27 159.7 10.9 119 28-152 20-138 (467)
6 2lnl_A C-X-C chemokine recepto 99.9 1.3E-21 4.4E-26 147.6 13.3 113 30-150 10-122 (296)
7 4dkl_A MU-type opioid receptor 99.9 3.9E-22 1.3E-26 158.0 10.1 119 27-152 13-131 (464)
8 3odu_A C-X-C chemokine recepto 99.9 2.4E-21 8.3E-26 155.1 13.3 116 28-151 45-160 (502)
9 3vw7_A Proteinase-activated re 99.9 2.5E-21 8.6E-26 154.4 10.8 119 27-152 16-135 (484)
10 4ea3_A Fusion protein of nocic 99.9 2.8E-21 9.6E-26 153.3 11.0 119 27-152 121-239 (434)
11 4eiy_A Adenosine receptor A2A/ 99.9 1.8E-21 6.1E-26 153.7 9.4 121 24-152 24-144 (447)
12 4amj_A Beta-1 adrenergic recep 99.9 9.8E-22 3.3E-26 148.2 7.5 120 27-152 7-126 (315)
13 3rze_A Histamine H1 receptor, 99.8 1.3E-21 4.4E-26 154.7 7.8 117 30-152 7-123 (452)
14 3pbl_A D(3) dopamine receptor, 99.8 2.8E-21 9.6E-26 154.0 9.8 112 28-145 35-147 (481)
15 3v2y_A Sphingosine 1-phosphate 99.8 3.5E-21 1.2E-25 156.2 9.7 114 32-153 64-177 (520)
16 3eml_A Human adenosine A2A rec 99.8 3.9E-21 1.3E-25 153.1 9.8 116 29-152 19-134 (488)
17 2z73_A Rhodopsin; visual pigme 99.8 7.3E-21 2.5E-25 151.1 10.4 120 27-152 30-150 (448)
18 3sn6_R Lysozyme, beta-2 adrene 99.8 6.4E-21 2.2E-25 154.2 9.0 120 27-152 178-297 (514)
19 1hll_A Alpha-2A adrenergic rec 98.8 1.4E-09 4.8E-14 55.1 1.3 29 123-151 2-30 (32)
20 2lot_A Apelin receptor; membra 97.0 7E-05 2.4E-09 43.6 -0.8 29 33-61 30-58 (64)
21 3arc_I Photosystem II reaction 28.5 49 0.0017 16.5 2.2 16 34-49 11-26 (38)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.92 E-value=9.8e-25 Score=176.84 Aligned_cols=125 Identities=18% Similarity=0.301 Sum_probs=106.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhh--ccccc
Q psy8280 27 DEDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDIN--YRFPG 104 (158)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~--~~~~~ 104 (158)
+........++|++++++|++||+++++++.+.|++|+ +|+++|+|++|||++|++.+++.+|..+...+. ..|.+
T Consensus 28 ~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~--~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~ 105 (510)
T 4grv_A 28 DIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQS--LQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAF 105 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCC--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEh
Confidence 33455677889999999999999999999999988766 779999999999999999999888887766543 56888
Q ss_pred ccccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEEee
Q psy8280 105 QSNWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLIGR 154 (158)
Q Consensus 105 ~~~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~~~ 154 (158)
| +..|++..++......+|++++++||+|||+||++|++|++..+.++.
T Consensus 106 g-~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~ 154 (510)
T 4grv_A 106 G-DAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRT 154 (510)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCC
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEecccccccccccccc
Confidence 8 889999999999999999999999999999999999999987765543
No 2
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.91 E-value=4.2e-23 Score=159.48 Aligned_cols=140 Identities=20% Similarity=0.348 Sum_probs=113.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCChhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHH
Q psy8280 1 MEDPSGTEIPFPGTQNGTGDPDPDPRDEDLA-RIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLS 79 (158)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La 79 (158)
|+++...++....+.+.++....+...+... .....++.+++++|++||+++++++.++|+ +|++.|+++.|||
T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~-----l~~~~~~~l~~La 75 (364)
T 2ks9_A 1 MDNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKR-----MRTVTNYFLVNLA 75 (364)
T ss_dssp -CCSSSSSCCSSTTCCCTTTSCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-----CCCHHHHHHHHHH
T ss_pred CCCcccCCCCCCCCCCCCCcCcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----ccchHHHHHHHHH
Confidence 5666555555444433333333333333333 344788999999999999999999999988 8899999999999
Q ss_pred HHHHHHHHHhhHHHHHHhhhcccccccccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccc
Q psy8280 80 IADLVTGVFNVLPQLWWDINYRFPGQSNWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYH 146 (158)
Q Consensus 80 ~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~ 146 (158)
++|++.++..+|..........|.++ +..|++..++...+..+|.+++++||+|||++|++|++|+
T Consensus 76 iaDll~~~~~~p~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~ 141 (364)
T 2ks9_A 76 FAEASMAAFNTVVNFTYAVHNEWYYG-LFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR 141 (364)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTSCSSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccch-HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 99999998888888777777788888 8899999999999999999999999999999999999986
No 3
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.89 E-value=3e-23 Score=167.49 Aligned_cols=120 Identities=25% Similarity=0.269 Sum_probs=107.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccccccc
Q psy8280 27 DEDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQS 106 (158)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~ 106 (158)
.+.......+++.+++++|++||+++++++.++++ +|++.|++++|||++|++.+++.+|..+...+...|.++
T Consensus 36 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~-----l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~- 109 (500)
T 2rh1_A 36 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFER-----LQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFG- 109 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG-----GCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSH-
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc-----cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCC-
Confidence 34455667788999999999999999999999988 889999999999999999999888888888777889988
Q ss_pred ccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 107 NWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 107 ~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
+..|++..++..+...+|++++++||+|||+||++|++|+++.+.+
T Consensus 110 ~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~ 155 (500)
T 2rh1_A 110 NFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKN 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeeccc
Confidence 8899999999999999999999999999999999999998765443
No 4
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.89 E-value=3.3e-22 Score=153.17 Aligned_cols=114 Identities=18% Similarity=0.323 Sum_probs=103.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhcccccccc
Q psy8280 28 EDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQSN 107 (158)
Q Consensus 28 ~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~~ 107 (158)
+........++.+++++|++||+++++++.++++ +|++.|+++.|||++|++.++..+|..+.......|.++ +
T Consensus 35 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~-----~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~-~ 108 (349)
T 1u19_A 35 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKK-----LRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFG-P 108 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-----CCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTH-H
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhh-----hcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCC-h
Confidence 3445567788899999999999999999999988 889999999999999999999888877777777778888 8
Q ss_pred cchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhccccccc
Q psy8280 108 WTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHT 147 (158)
Q Consensus 108 ~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~ 147 (158)
..|++..++......+|.+++++||+|||++|++|++|++
T Consensus 109 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~ 148 (349)
T 1u19_A 109 TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR 148 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee
Confidence 8999999999999999999999999999999999999876
No 5
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.88 E-value=2.2e-22 Score=159.71 Aligned_cols=119 Identities=26% Similarity=0.341 Sum_probs=108.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhcccccccc
Q psy8280 28 EDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQSN 107 (158)
Q Consensus 28 ~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~~ 107 (158)
+....+..+++.+++++|++||+++++++.++++ +|++.|+++.|||++|++.+++.+|..+.......|.++ +
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~-----~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~-~ 93 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRH-----LQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLG-P 93 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG-----GCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSC-H
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCc-----cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCC-c
Confidence 3445678889999999999999999999999988 889999999999999999999888888888888889888 8
Q ss_pred cchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 108 WTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 108 ~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
..|++..++..++..+|++++++||+|||++|++|++|++..+.+
T Consensus 94 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~ 138 (467)
T 3uon_A 94 VVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTK 138 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHH
T ss_pred chHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchh
Confidence 899999999999999999999999999999999999998766544
No 6
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.87 E-value=1.3e-21 Score=147.60 Aligned_cols=113 Identities=21% Similarity=0.313 Sum_probs=99.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhcccccccccc
Q psy8280 30 LARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQSNWT 109 (158)
Q Consensus 30 ~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (158)
.+.+..++|.+++++|++||+++++++.++|+ +|+++|+++.|||++|++.++ .+|+..... ..+|..+ +..
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~-----lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~-~~~~~~~-~~~ 81 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRV-----GRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFG-TFL 81 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-----CCSTTHHHHHHHHHHHHHHHH-HHHHHHHHH-HSSSCCS-SHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccC-----CCChHHHHHHHHHHHHHHHHH-hhhHHHhhc-cCCCccc-hhH
Confidence 35567788999999999999999999999998 889999999999999999886 466655444 4568888 889
Q ss_pred hhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEE
Q psy8280 110 CKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFY 150 (158)
Q Consensus 110 C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~ 150 (158)
|+...+.......+|.+++++||+|||++|++|++|+...+
T Consensus 82 c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~ 122 (296)
T 2lnl_A 82 CKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKR 122 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHH
T ss_pred HHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhh
Confidence 99999999999999999999999999999999999987543
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.87 E-value=3.9e-22 Score=158.05 Aligned_cols=119 Identities=21% Similarity=0.297 Sum_probs=106.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccccccc
Q psy8280 27 DEDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQS 106 (158)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~ 106 (158)
+.....+..+++.+++++|++||+++++++.++++ +|++.|+++.|||++|++.++. +|..+.......|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~-----~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~- 85 (464)
T 4dkl_A 13 SMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTK-----MKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFG- 85 (464)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST-----TCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSC-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccc-----cCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccc-
Confidence 44456778889999999999999999999999988 8899999999999999999885 8888878788889888
Q ss_pred ccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 107 NWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 107 ~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
...|++..++..++..+|++++++||+|||++|++|++|+++.+.+
T Consensus 86 ~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~ 131 (464)
T 4dkl_A 86 NILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPR 131 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence 8899999999999999999999999999999999999997765433
No 8
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.86 E-value=2.4e-21 Score=155.15 Aligned_cols=116 Identities=23% Similarity=0.224 Sum_probs=101.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhcccccccc
Q psy8280 28 EDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQSN 107 (158)
Q Consensus 28 ~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~~ 107 (158)
+....+..+++.+++++|++||+++++++.++++ +|++.|+++.|||++|++.++ .+|..+... ...|.++ +
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~-----l~~~~~~~l~~La~~Dll~~~-~~p~~~~~~-~~~~~~~-~ 116 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKK-----LRSMTDKYRLHLSVADLLFVI-TLPFWAVDA-VANWYFG-N 116 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-----SCCHHHHHHHHHHHHHHHHHT-THHHHHHHH-HTCCCSH-H
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHH-hcCCcCC-c
Confidence 4456778889999999999999999999999998 889999999999999999964 566655544 4478888 7
Q ss_pred cchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEE
Q psy8280 108 WTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYL 151 (158)
Q Consensus 108 ~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~ 151 (158)
..|++..++..+...+|++++++||+|||++|++|++|++..+.
T Consensus 117 ~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~ 160 (502)
T 3odu_A 117 FLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKL 160 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccch
Confidence 88999999999999999999999999999999999998766544
No 9
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.85 E-value=2.5e-21 Score=154.43 Aligned_cols=119 Identities=16% Similarity=0.202 Sum_probs=100.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhh-cccccc
Q psy8280 27 DEDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDIN-YRFPGQ 105 (158)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~-~~~~~~ 105 (158)
.+....+..+++.+++++|++||+++++++.++++ +|+++|++++|||++|++.++ .+|+.....+. ..|.++
T Consensus 16 ~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~-----l~~~~~~~l~~La~aDll~~~-~~~~~~~~~~~~~~~~~~ 89 (484)
T 3vw7_A 16 SSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMK-----VKKPAVVYMLHLATADVLFVS-VLPFKISYYFSGSDWQFG 89 (484)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHTTSCCCSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcccc
Confidence 44566778889999999999999999999999998 889999999999999999976 46666665554 478888
Q ss_pred cccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 106 SNWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 106 ~~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
+..|++..++..++..+|++++++||+|||+||++|++|+++.+.+
T Consensus 90 -~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~ 135 (484)
T 3vw7_A 90 -SELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLG 135 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHH
T ss_pred -hhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchh
Confidence 8999999999999999999999999999999999999997765443
No 10
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.85 E-value=2.8e-21 Score=153.26 Aligned_cols=119 Identities=24% Similarity=0.262 Sum_probs=99.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccccccc
Q psy8280 27 DEDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQS 106 (158)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~ 106 (158)
++.......+++.+++++|++||+++++++.++++ +|++.|+++.|||++|++.+ +.+|..........|..+
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~-----l~~~~~~ll~~LAvsDll~~-~~~p~~~~~~~~~~~~~~- 193 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTK-----MKTATNIYIFNLALADTLVL-LTLPFQGTDILLGFWPFG- 193 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS-----CCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHHTSCTTH-
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCc-----cCchhHHHHHHHHHHHHHHH-HHhHHHHHHHHhcCCcCc-
Confidence 34456677889999999999999999999999998 88999999999999999984 467777777777788888
Q ss_pred ccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 107 NWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 107 ~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
...|++..++..++..+|++++++||+|||++|++|++|++..+.+
T Consensus 194 ~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~ 239 (434)
T 4ea3_A 194 NALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSS 239 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchh
Confidence 8899999999999999999999999999999999999998776544
No 11
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.85 E-value=1.8e-21 Score=153.72 Aligned_cols=121 Identities=25% Similarity=0.318 Sum_probs=103.6
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhcccc
Q psy8280 24 DPRDEDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFP 103 (158)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~ 103 (158)
...+.....+...++.+++++|++||+++++++.++++ +|++.|+++.|||++|++.+++.+|..+... ..|.
T Consensus 24 ~~~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~-----l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~ 96 (447)
T 4eiy_A 24 GAPPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSN-----LQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFC 96 (447)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG-----GCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCE
T ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccc-----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccc
Confidence 34455566678889999999999999999999999988 8899999999999999999887777666533 3555
Q ss_pred cccccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 104 GQSNWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 104 ~~~~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
.+ ...|++..++......+|++++++||+|||++|++|++|+++.+.+
T Consensus 97 ~~-~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~ 144 (447)
T 4eiy_A 97 AA-CHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGT 144 (447)
T ss_dssp EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHH
T ss_pred cC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHH
Confidence 56 7789999999999999999999999999999999999987665443
No 12
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.85 E-value=9.8e-22 Score=148.24 Aligned_cols=120 Identities=25% Similarity=0.302 Sum_probs=107.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccccccc
Q psy8280 27 DEDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQS 106 (158)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~ 106 (158)
+++......+++.+++++|++||+++++++.++++ +|++.|+++.|||++|++.++..+|..+.......|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~-----~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~- 80 (315)
T 4amj_A 7 SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQR-----LQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWG- 80 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG-----GCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSC-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchh-----hcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeecc-
Confidence 34456678889999999999999999999999988 889999999999999999988778887777777889888
Q ss_pred ccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 107 NWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 107 ~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
+..|++..++...+..+|.++++++|+|||++|++|++|++..+.+
T Consensus 81 ~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~ 126 (315)
T 4amj_A 81 SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRA 126 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchh
Confidence 8899999999999999999999999999999999999988765443
No 13
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.85 E-value=1.3e-21 Score=154.75 Aligned_cols=117 Identities=25% Similarity=0.309 Sum_probs=105.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhcccccccccc
Q psy8280 30 LARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQSNWT 109 (158)
Q Consensus 30 ~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (158)
...+..+++.+++++|++||+++++++.++++ +|++.|+++.|||++|++.+++.+|..+.......|.++ +..
T Consensus 7 ~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~-----~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~-~~~ 80 (452)
T 3rze_A 7 QLMPLVVVLSTICLVTVGLNLLVLYAVRSERK-----LHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLG-RPL 80 (452)
T ss_dssp --CGGGTHHHHHHHHHHHHHHHHHHHHHHCST-----TCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC-chh
Confidence 34456678999999999999999999999998 889999999999999999998888888888888889888 889
Q ss_pred hhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 110 CKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 110 C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
|++..++..++..+|++++++||+|||++|++|++|+++.+.+
T Consensus 81 C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~ 123 (452)
T 3rze_A 81 CLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKT 123 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchh
Confidence 9999999999999999999999999999999999998765443
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.85 E-value=2.8e-21 Score=154.04 Aligned_cols=112 Identities=21% Similarity=0.321 Sum_probs=97.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhh-ccccccc
Q psy8280 28 EDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDIN-YRFPGQS 106 (158)
Q Consensus 28 ~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~-~~~~~~~ 106 (158)
+....+..+++.+++++|++||+++++++.++++ +|++.|++++|||++|++.+++.+|..+...+. ..|.++
T Consensus 35 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~-----~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~- 108 (481)
T 3pbl_A 35 ARPHAYYALSYCALILAIVFGNGLVCMAVLKERA-----LQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFS- 108 (481)
T ss_dssp ------CCSHHHHHHHHHHHHHHHHHHHHHHCST-----TCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSC-
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhHHhhhccc-----cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-
Confidence 3445566778899999999999999999999988 889999999999999999998888877766555 568888
Q ss_pred ccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhccccc
Q psy8280 107 NWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTY 145 (158)
Q Consensus 107 ~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y 145 (158)
...|++..++..++..+|++++++||+|||++|++|++|
T Consensus 109 ~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~ 147 (481)
T 3pbl_A 109 RICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHY 147 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 889999999999999999999999999999999999998
No 15
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.84 E-value=3.5e-21 Score=156.23 Aligned_cols=114 Identities=22% Similarity=0.278 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhcccccccccchh
Q psy8280 32 RIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQSNWTCK 111 (158)
Q Consensus 32 ~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~C~ 111 (158)
.+..+++++++++|++||+++++++.++++ +|+++|++++|||++|++.++..+|..+.. ....|..+ ...|+
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~-----lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~-~~~c~ 136 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKK-----FHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLT-PAQWF 136 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCST-----TCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSC-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----ccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeC-ccccc
Confidence 577889999999999999999999999999 889999999999999999998766555444 56677777 78999
Q ss_pred hhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEEe
Q psy8280 112 LVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLIG 153 (158)
Q Consensus 112 ~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~~ 153 (158)
+..++..+...+|++++++||+|||+||+ |++|+...+.++
T Consensus 137 ~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~ 177 (520)
T 3v2y_A 137 LREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFR 177 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhH
Confidence 99999999999999999999999999999 999988766554
No 16
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.84 E-value=3.9e-21 Score=153.12 Aligned_cols=116 Identities=26% Similarity=0.347 Sum_probs=101.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccccccccc
Q psy8280 29 DLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQSNW 108 (158)
Q Consensus 29 ~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~~~ 108 (158)
....+..+++++++++|++||+++++++.++++ +|++.|++++|||++|++.+++.+|..+.... .|..+ ..
T Consensus 19 ~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~-----~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~-~~ 90 (488)
T 3eml_A 19 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSN-----LQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAA-CH 90 (488)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG-----GCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEEC-HH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhheeeccc-----cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccccc-ch
Confidence 345678889999999999999999999999998 88999999999999999999877776665433 56666 78
Q ss_pred chhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 109 TCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 109 ~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
.|++..++..+...+|++++++||+|||++|++|++|++..+.+
T Consensus 91 ~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~ 134 (488)
T 3eml_A 91 GCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGT 134 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHH
Confidence 99999999999999999999999999999999999998765543
No 17
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.84 E-value=7.3e-21 Score=151.07 Aligned_cols=120 Identities=18% Similarity=0.166 Sum_probs=104.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHh-hHHHHHHhhhcccccc
Q psy8280 27 DEDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFN-VLPQLWWDINYRFPGQ 105 (158)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~-~~~~~~~~~~~~~~~~ 105 (158)
.+.......+++.+++++|++||+++++++.++|+ +|++.|++++|||++|++.+++. +|..+.......|.++
T Consensus 30 ~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~-----~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~ 104 (448)
T 2z73_A 30 PDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKS-----LQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFG 104 (448)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST-----TCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSH
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccc-----cCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCC
Confidence 33455667788899999999999999999999988 88999999999999999998864 6666666667788888
Q ss_pred cccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 106 SNWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 106 ~~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
...|++..++..++..+|++++++||+|||++|++|++|+++++.+
T Consensus 105 -~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~ 150 (448)
T 2z73_A 105 -FAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHR 150 (448)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechh
Confidence 8899999999999999999999999999999999999997765544
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.83 E-value=6.4e-21 Score=154.21 Aligned_cols=120 Identities=25% Similarity=0.281 Sum_probs=107.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccccccc
Q psy8280 27 DEDLARIEILTLLVILIITLIGNLMVLAALYSRRHYRKQIKMSRMYYFILHLSIADLVTGVFNVLPQLWWDINYRFPGQS 106 (158)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~N~lvi~~~~~~~~l~~~~~~~~~~~~l~~La~~Dll~~~~~~~~~~~~~~~~~~~~~~ 106 (158)
++.......+++.+++++|++||+++++++.++++ +|++.|++++|||++|++.+++.+|..+.......|.++
T Consensus 178 ~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~-----lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~- 251 (514)
T 3sn6_R 178 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFER-----LQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFG- 251 (514)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG-----GCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSC-
T ss_pred CchHHHHHHHHHHHHHHHHHHhHHHhhhheecccc-----cccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCC-
Confidence 33445667788999999999999999999999888 889999999999999999998888888888778889888
Q ss_pred ccchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcccccccEEEEE
Q psy8280 107 NWTCKLVKFVQPSGSFLSSYILMAIAIDRYRAICHPLTYHTYFYLI 152 (158)
Q Consensus 107 ~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~ai~~P~~y~~~~~~~ 152 (158)
+..|++..++..++..+|++++++||+|||++|++|++|+++++.+
T Consensus 252 ~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~ 297 (514)
T 3sn6_R 252 NFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKN 297 (514)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHH
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccch
Confidence 8899999999999999999999999999999999999998765443
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.78 E-value=1.4e-09 Score=55.12 Aligned_cols=29 Identities=31% Similarity=0.358 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccEEEE
Q psy8280 123 LSSYILMAIAIDRYRAICHPLTYHTYFYL 151 (158)
Q Consensus 123 ~s~~~l~~ia~dRy~ai~~P~~y~~~~~~ 151 (158)
+|++++++||+|||++|++|++|+...+.
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~ 30 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTP 30 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCC
Confidence 68999999999999999999999876543
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=97.00 E-value=7e-05 Score=43.57 Aligned_cols=29 Identities=14% Similarity=0.368 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy8280 33 IEILTLLVILIITLIGNLMVLAALYSRRH 61 (158)
Q Consensus 33 ~~~~~~~~~~~~g~~~N~lvi~~~~~~~~ 61 (158)
...++|++++++|++||++++|++.++|.
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~ 58 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKG 58 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecc
Confidence 67789999999999999999999998876
No 21
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=28.48 E-value=49 Score=16.51 Aligned_cols=16 Identities=0% Similarity=0.349 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHH
Q psy8280 34 EILTLLVILIITLIGN 49 (158)
Q Consensus 34 ~~~~~~~~~~~g~~~N 49 (158)
...+++.+.++|.+.|
T Consensus 11 vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 11 VVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccccCC
Confidence 4455666666676655
Done!