RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8281
(178 letters)
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 47.8 bits (114), Expect = 5e-09
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTGQRCQIKV 133
++CE+SPC N G C D +G ++CTC G+ G+ C++
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT 38
Score = 38.9 bits (91), Expect = 1e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 134 DLCDPNPCSHHHYCVDKGNTFACECPKGYQGPNCDV 169
D C+ +PC + C D + C C +G++G NC++
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL 36
Score = 38.5 bits (90), Expect = 1e-05
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 59 DDCASSPCGH-GICVDQTDGYRCYCQPGYSGEQCQ 92
D C +SPC + G C D Y C C G+ G+ C+
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE 35
Score = 34.7 bits (80), Expect = 3e-04
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQHN 57
D CE+ PCQN G C ++ C C GF G C+
Sbjct: 1 DQCETSPCQNQGKCKDGL---GEYTCTCLEGFEGKNCELF 37
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 47.4 bits (113), Expect = 6e-09
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTGQRCQI 131
++CES+PCLNGGSC D + + C C G+ G+ C++
Sbjct: 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 40.0 bits (94), Expect = 3e-06
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 131 IKVDLCDPNPCSHHHYCVDKGNTFACECPKGYQGPNCDV 169
+ D C+ NPC + C D N++ C CP G++G NC++
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 38.9 bits (91), Expect = 1e-05
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 57 NLDDCASSPCGH-GICVDQTDGYRCYCQPGYSGEQCQ 92
+ D C S+PC + G C D + Y C+C G+ G+ C+
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 35.0 bits (81), Expect = 2e-04
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQ 55
D CES PC NGGSC ++C CP GF G C+
Sbjct: 4 DQCESNPCLNGGSC---KDDINSYECWCPFGFEGKNCE 38
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 47.0 bits (112), Expect = 9e-09
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTGQRCQI 131
NEC S+PC N +C D +G F C C GY G C++
Sbjct: 2 NECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV 37
Score = 40.0 bits (94), Expect = 4e-06
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 133 VDLCDPNPCSHHHYCVDKGNTFACECPKGYQGPNCDV 169
V+ C NPC + C+D+ F C C GY+G +C+V
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV 37
Score = 38.5 bits (90), Expect = 1e-05
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 59 DDCASSPCGHG-ICVDQTDGYRCYCQPGYSGEQCQ 92
++C S+PC + C+DQ ++C C PGY G C+
Sbjct: 2 NECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCE 36
Score = 35.8 bits (83), Expect = 1e-04
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQHN 57
+ C S PCQN +C +F+C+C PG+ G C+ N
Sbjct: 2 NECVSNPCQNDATC---LDQIGEFQCICMPGYEGVHCEVN 38
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 44.3 bits (105), Expect = 8e-08
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTGQRCQ 130
++C SSPC NGGSC D + + C C + G+ C+
Sbjct: 3 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37
Score = 38.1 bits (89), Expect = 2e-05
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 133 VDLCDPNPCSHHHYCVDKGNTFACECPKGYQGPNCD 168
D C +PC + C D+ ++ C C ++G NC+
Sbjct: 2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37
Score = 37.0 bits (86), Expect = 4e-05
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 59 DDCASSPCGHG-ICVDQTDGYRCYCQPGYSGEQCQ 92
D CASSPC +G C DQ Y C+C P + G C+
Sbjct: 3 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37
Score = 33.1 bits (76), Expect = 0.001
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQ 55
D C S PCQNGGSC Q + C C P F G C+
Sbjct: 3 DQCASSPCQNGGSC---KDQLQSYICFCLPAFEGRNCE 37
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 44.3 bits (105), Expect = 8e-08
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTGQRCQ 130
+EC SSPCL+ G C D + F C C G+TG CQ
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35
Score = 37.0 bits (86), Expect = 4e-05
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 59 DDCASSPCGH-GICVDQTDGYRCYCQPGYSGEQCQ 92
D+CASSPC H G C+D+ + ++C C G++G CQ
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35
Score = 35.8 bits (83), Expect = 1e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 134 DLCDPNPCSHHHYCVDKGNTFACECPKGYQGPNC 167
D C +PC H+ C+DK N F CECP G+ G C
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLC 34
Score = 33.1 bits (76), Expect = 0.001
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQ 55
D C S PC + G C +F+C CP GF+G LCQ
Sbjct: 1 DECASSPCLHNGRCLD---KINEFQCECPTGFTGHLCQ 35
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 43.4 bits (102), Expect = 3e-07
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 96 NECESSPCLNGGSC-----SDHVGRFSCTCGHGYTGQRCQIKVDLCDPNPCSHHH 145
E E + C+NGG C + R+ C C G+TG RC V + N
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKAEE 61
Score = 39.2 bits (91), Expect = 1e-05
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 18 DPCESGPCQNGGSCAASNLTAQ--QFKCLCPPGFSGSLCQHNLDDCASSPC 66
E C NGG C + ++ C C PGF+G+ C N+ +
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQE 57
Score = 36.5 bits (84), Expect = 1e-04
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 6/53 (11%)
Query: 57 NLDDCASSPCGHGIC------VDQTDGYRCYCQPGYSGEQCQYEYNECESSPC 103
+ + C +G + Y C CQPG++G +C +
Sbjct: 5 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQE 57
Score = 31.1 bits (70), Expect = 0.010
Identities = 8/43 (18%), Positives = 16/43 (37%), Gaps = 5/43 (11%)
Query: 131 IKVDLCDPNPCSHHHYC-----VDKGNTFACECPKGYQGPNCD 168
+K + C + C + + + C+C G+ G C
Sbjct: 4 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 41.3 bits (97), Expect = 1e-06
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 96 NECE--SSPCLNGGSCSDHVGRFSCTCGHGYTGQRCQI 131
+EC ++PC + G C + +G F C C GYTG RC+I
Sbjct: 4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI 41
Score = 35.1 bits (81), Expect = 2e-04
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 136 CDPNPCSHHHYCVDKGNTFACECPKGYQGPNCDV 169
NPC H C++ +F C+C +GY GP C++
Sbjct: 8 LGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI 41
Score = 32.8 bits (75), Expect = 0.002
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 60 DCASSPCGH-GICVDQTDGYRCYCQPGYSGEQCQ 92
++PC H G C++ + C C GY+G +C+
Sbjct: 7 SLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE 40
Score = 30.5 bits (69), Expect = 0.010
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 20 CESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQHN 57
+ PC++ G C T F+C C G++G C+ +
Sbjct: 8 LGANPCEHAGKC---INTLGSFECQCLQGYTGPRCEID 42
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 40.9 bits (96), Expect = 2e-06
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTGQRCQIKV 133
C ++ C G C + + ++C C G++G +C+ V
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 39
Score = 37.1 bits (86), Expect = 5e-05
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 134 DLCDPNPCSHHHYCVDKGNTFACECPKGYQGPNCD 168
C CS H CV+ N + C+C G+ G C+
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 36
Score = 35.1 bits (81), Expect = 2e-04
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 59 DDCASSPCGH-GICVDQTDGYRCYCQPGYSGEQCQYE 94
C ++ C G CV+ + Y C C PG+SG +C+
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 38
Score = 34.0 bits (78), Expect = 6e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 17 SDPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQHN 57
+ C + C G C T + C C PGFSG C+
Sbjct: 1 TAACTNTSCSGHGEC---VETINNYTCKCDPGFSGLKCEQI 38
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 40.9 bits (96), Expect = 2e-06
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTGQRCQIKVD 134
C+ C G C + +G ++C+C G+ G C+ D
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRD 40
Score = 37.1 bits (86), Expect = 4e-05
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 134 DLCDPNPCSHHHYCVDKGNTFACECPKGYQGPNCD 168
C CS C++ + C C G+ GP C+
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE 36
Score = 35.2 bits (81), Expect = 2e-04
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 59 DDCASSPCGH-GICVDQTDGYRCYCQPGYSGEQCQY 93
C C G C++ Y C C PG+ G +C+Y
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEY 37
Score = 32.5 bits (74), Expect = 0.002
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQHNLD 59
C+ C G C T + C C PGF G C++ D
Sbjct: 2 ASCQDMSCSKQGEC---LETIGNYTCSCYPGFYGPECEYVRD 40
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 39.8 bits (93), Expect = 6e-06
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTGQRCQIKVD 134
+ C S C +G C D +G FSC C G+ G+ CQ +V
Sbjct: 9 HPCASLCCGHGT-CIDGIGSFSCDCRSGWEGRFCQREVS 46
Score = 39.4 bits (92), Expect = 7e-06
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 59 DDCASSPCGHGICVDQTDGYRCYCQPGYSGEQCQYE 94
CAS CGHG C+D + C C+ G+ G CQ E
Sbjct: 9 HPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQRE 44
Score = 31.3 bits (71), Expect = 0.007
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQHNLD 59
PC S C +G F C C G+ G CQ +
Sbjct: 9 HPCASLCCGHGTCIDGIG----SFSCDCRSGWEGRFCQREVS 46
Score = 30.9 bits (70), Expect = 0.008
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 133 VDLCDPNPCSHHHYCVDKGNTFACECPKGYQGPNCDV 169
C C H C+D +F+C+C G++G C
Sbjct: 8 EHPCASLCC-GHGTCIDGIGSFSCDCRSGWEGRFCQR 43
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 36.4 bits (84), Expect = 1e-04
Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 13 CEDTSDPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQH 56
G C NGG C + + C C G+SG CQ
Sbjct: 2 SYPGCPSSYDGYCLNGGVCMHIE-SLDSYTCNCVIGYSGDRCQT 44
Score = 36.0 bits (83), Expect = 2e-04
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 94 EYNECESSPCLNGGSC--SDHVGRFSCTCGHGYTGQRCQIK 132
CLNGG C + + ++C C GY+G RCQ +
Sbjct: 5 GCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45
Score = 29.5 bits (66), Expect = 0.031
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 59 DDCASSPCGHG---ICVDQTDGYRCYCQPGYSGEQCQY 93
C +G + ++ D Y C C GYSG++CQ
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 27.9 bits (62), Expect = 0.11
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 136 CDPNPCSHHHYC--VDKGNTFACECPKGYQGPNC 167
C + C ++ +++ C C GY G C
Sbjct: 9 SYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 35.2 bits (81), Expect = 2e-04
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 96 NECESSPCLNGGSCSD-HVGRFSCTCGH-GYTGQRCQI 131
N C S+PC N G C ++ C C G+ G+ C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 32.5 bits (74), Expect = 0.002
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 17 SDPCESGPCQNGGSCAASNLTAQQFKCLCP-PGFSGSLCQH 56
++PC S PCQN G C + Q+KC C GF G C
Sbjct: 1 ANPCCSNPCQNRGEC--MSTGFDQYKCDCTRTGFYGENCTT 39
Score = 30.9 bits (70), Expect = 0.008
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 134 DLCDPNPCSHHHYCVDKG-NTFACECPK-GYQGPNCDVP 170
+ C NPC + C+ G + + C+C + G+ G NC P
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40
Score = 27.1 bits (60), Expect = 0.19
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 59 DDCASSPCGH-GICVDQ-TDGYRCYC-QPGYSGEQCQ 92
+ C S+PC + G C+ D Y+C C + G+ GE C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 34.9 bits (80), Expect = 3e-04
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQH 56
G C + G C ++ C C G+ G CQ+
Sbjct: 5 PLSHDGYCLHDGVCMYIE-ALDKYACNCVVGYIGERCQY 42
Score = 34.9 bits (80), Expect = 3e-04
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 96 NECESSPCLNGGSCS--DHVGRFSCTCGHGYTGQRCQIK 132
CL+ G C + + +++C C GY G+RCQ +
Sbjct: 5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 43
Score = 29.1 bits (65), Expect = 0.042
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 59 DDCASSPCGHG---ICVDQTDGYRCYCQPGYSGEQCQY 93
C H + ++ D Y C C GY GE+CQY
Sbjct: 5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 42
Score = 27.1 bits (60), Expect = 0.18
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 132 KVDLCDPNPCSHHHYC--VDKGNTFACECPKGYQGPNC 167
+ L C H C ++ + +AC C GY G C
Sbjct: 3 ECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERC 40
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 34.8 bits (80), Expect = 3e-04
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 98 CESSPCLNGGSCSDHV--GRFSCTCGHGYTGQRCQIKVD 134
C C NGG+C + F C C G+ G+ C+I
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 39
Score = 31.0 bits (70), Expect = 0.007
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 20 CESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQHNLD 59
C C NGG+C L F C CP GF+G C+ +
Sbjct: 1 CSEPRCFNGGTC-QQALYFSDFVCQCPEGFAGKSCEIDTR 39
Score = 30.2 bits (68), Expect = 0.015
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 136 CDPNPCSHHHYCVDK--GNTFACECPKGYQGPNCDV 169
C C + C + F C+CP+G+ G +C++
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI 36
Score = 28.7 bits (64), Expect = 0.046
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 61 CASSPCGH-GICVDQTDG--YRCYCQPGYSGEQCQYEYNE 97
C+ C + G C + C C G++G+ C+ +
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 40
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 34.0 bits (78), Expect = 6e-04
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 96 NECESSPCLNGGSCSDH-VGRFSCTC-GHGYTGQRCQI 131
N C PC + G C + R+ C C GY+G C I
Sbjct: 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 33.3 bits (76), Expect = 0.001
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 133 VDLCDPNPCSHHHYCVDKG-NTFACECPK-GYQGPNCDVP 170
V+ C PC H CV G + + C+C + GY GPNC +P
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41
Score = 30.9 bits (70), Expect = 0.007
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPP-GFSGSLCQH 56
+PC PCQ+ G C +++C C G+SG C
Sbjct: 3 NPCCYYPCQHQGIC--VRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 27.1 bits (60), Expect = 0.17
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 58 LDDCASSPCGH-GICVDQ-TDGYRCYCQP-GYSGEQCQ 92
++ C PC H GICV D Y+C C GYSG C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 46
Score = 31.7 bits (72), Expect = 0.005
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 59 DDCASSPCGHGIC--VDQTDGYRCYCQPGYSGEQCQY 93
+ C HG C + C C+ GY+G +C++
Sbjct: 7 SSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEH 43
Score = 31.3 bits (71), Expect = 0.006
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 96 NECESSPCLNGGSCSDH-VGRFSCTCGHGYTGQRCQ 130
+ + CL+G + + C C GYTG RC+
Sbjct: 7 SSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42
Score = 29.7 bits (67), Expect = 0.021
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQH 56
+G C +G ++ Q C C G++G C+H
Sbjct: 7 SSDMNGYCLHGQCIYLVDM--SQNYCRCEVGYTGVRCEH 43
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 50
Score = 31.3 bits (71), Expect = 0.008
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 96 NECESSPCLNGGSCSDH-VGRFSCTCGHGYTGQRCQ 130
+ C+ G SC C GY G RC+
Sbjct: 9 PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCE 44
Score = 29.4 bits (66), Expect = 0.033
Identities = 8/39 (20%), Positives = 12/39 (30%), Gaps = 2/39 (5%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQH 56
C G Q C+C G+ G+ C+
Sbjct: 9 PKQYKHYCIKGRCRFVVAE--QTPSCVCDEGYIGARCER 45
Score = 29.0 bits (65), Expect = 0.051
Identities = 10/37 (27%), Positives = 12/37 (32%), Gaps = 2/37 (5%)
Query: 59 DDCASSPCGHGIC--VDQTDGYRCYCQPGYSGEQCQY 93
C G C V C C GY G +C+
Sbjct: 9 PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 45
Score = 22.5 bits (48), Expect = 9.7
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 7/46 (15%)
Query: 136 CDPNPCSHHHYCVDKG-------NTFACECPKGYQGPNCDVPGIVF 174
P + HYC+ T +C C +GY G C+ + +
Sbjct: 5 FSRCPKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCERVDLFY 50
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo
sapiens) [TaxId: 9606]}
Length = 49
Score = 30.2 bits (68), Expect = 0.015
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 96 NECESSPCLNGGSC-SDHVGRFSCTCGHGYTGQRCQ 130
+ + C +G + +C C GY G RC+
Sbjct: 8 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 43
Score = 28.6 bits (64), Expect = 0.069
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 59 DDCASSPCGHGIC--VDQTDGYRCYCQPGYSGEQCQY 93
D + C HG C + Q D C C GY G +C++
Sbjct: 8 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCEH 44
Score = 28.3 bits (63), Expect = 0.074
Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 18 DPCESGPCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQH 56
+ C +G + C+C G+ G+ C+H
Sbjct: 8 PDSHTQFCFHGTCRFLVQE--DKPACVCHSGYVGARCEH 44
Score = 22.9 bits (49), Expect = 7.8
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 7/40 (17%)
Query: 136 CDPNPCSHHHYCVDKG-------NTFACECPKGYQGPNCD 168
+ P SH +C + AC C GY G C+
Sbjct: 4 FNDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 43
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 29.0 bits (65), Expect = 0.039
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTG 126
+EC+ G C + G + C C GY
Sbjct: 6 DECKEPDVCKHGQCINTDGSYRCECPFGYIL 36
Score = 26.3 bits (58), Expect = 0.33
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 131 IKVDLCDPNPCSHHHYCVDKGNTFACECPKGYQG 164
+ +D C H C++ ++ CECP GY
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL 36
Score = 25.5 bits (56), Expect = 0.70
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 59 DDCASSPCG-HGICVDQTDGYRCYCQPGYSG 88
D+C HG C++ YRC C GY
Sbjct: 6 DECKEPDVCKHGQCINTDGSYRCECPFGYIL 36
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 44
Score = 28.3 bits (63), Expect = 0.087
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 58 LDDCASSP--CGHGICVDQTDGYRCYCQPGYSGEQC 91
+D+C SP CG G CV+ + C C GY
Sbjct: 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFM 38
Score = 24.4 bits (53), Expect = 1.9
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 96 NECESSP-CLNGGSCSDHVGRFSCTCGHGYTG 126
+EC SP G C + G F C C GY
Sbjct: 4 DECRISPDLCGRGQCVNTPGDFECKCDEGYES 35
Score = 23.2 bits (50), Expect = 4.2
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 137 DPNPCSHHHYCVDKGNTFACECPKGYQGPNCD 168
CV+ F C+C +GY+
Sbjct: 8 ISPDLCGRGQCVNTPGDFECKCDEGYESGFMM 39
>d1okia1 b.11.1.1 (A:54-144) beta-Crystallin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 91
Score = 29.0 bits (65), Expect = 0.093
Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 2/58 (3%)
Query: 57 NLDDCASSPCGHGICVDQTDGYRCYCQPGYSGEQCQYEYNECESSPCLNGGSCSDHVG 114
NL D + + + Q + GE E E + SD +
Sbjct: 28 NLADRGFDRVR--SIIVSAGPWVAFEQSNFRGEMFILEKGEYPRWNTWSSSYRSDRLM 83
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor,
HBEGF {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 26.2 bits (58), Expect = 0.39
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 66 CGHGIC--VDQTDGYRCYCQPGYSGEQCQY 93
C HG C V + C C PGY GE+C
Sbjct: 10 CIHGECKYVKELRAPSCICHPGYHGERCHG 39
Score = 22.8 bits (49), Expect = 6.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 112 HVGRFSCTCGHGYTGQRCQ 130
+ SC C GY G+RC
Sbjct: 20 ELRAPSCICHPGYHGERCH 38
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 25.9 bits (57), Expect = 0.42
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 59 DDCASSP--CGHGICVDQTDGYRCYCQPGY 86
D+C P C G+C + YRC C PG+
Sbjct: 3 DECQRDPLLCRGGVCHNTEGSYRCECPPGH 32
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 26.0 bits (57), Expect = 0.46
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 25 CQNGGSCAASNLTAQQFKCLCPPGFSGSLCQ 55
C NGG+C ++ + C CP F G C+
Sbjct: 4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 34
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 25.1 bits (55), Expect = 0.85
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 133 VDLCDPNPCSHHHYCVDKGNTFACECPKGYQ 163
+ C N H C D + C CP G+Q
Sbjct: 2 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQ 32
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 25.1 bits (55), Expect = 0.87
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 59 DDCASSP--CGHGICVDQTDGYRCYCQPGY 86
D+C P C G C++ ++C C GY
Sbjct: 4 DECQELPGLCQGGKCINTFGSFQCRCPTGY 33
Score = 23.2 bits (50), Expect = 5.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 96 NECESSPCL-NGGSCSDHVGRFSCTCGHGYT 125
+EC+ P L GG C + G F C C GY
Sbjct: 4 DECQELPGLCQGGKCINTFGSFQCRCPTGYY 34
>d1okia2 b.11.1.1 (A:145-236) beta-Crystallin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 26.3 bits (58), Expect = 0.89
Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 9/74 (12%)
Query: 47 PGFSG------SLCQHNLDDCASSPCGHGICVDQTDGYRCYCQPGYSGEQCQYEYNECES 100
F G +L S + V + + Y PGY G Q E +
Sbjct: 12 ANFKGNTIEIQGDDAPSLWVYGFSDRVGSVKV-SSGTWVGYQYPGYRGYQYLLE--PGDF 68
Query: 101 SPCLNGGSCSDHVG 114
G+ +
Sbjct: 69 RHWNEWGAFQPQMQ 82
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 24.5 bits (53), Expect = 1.5
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 96 NECESSPCLNGGSCSDHVGRFSCTCGHGYTGQ 127
NEC G+C + G + C C +
Sbjct: 4 NECLDPTTCISGNCVNTPGSYICDCPPDFELN 35
Score = 23.7 bits (51), Expect = 3.6
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 58 LDDCASS-PCGHGICVDQTDGYRCYCQPGYSG 88
+++C C G CV+ Y C C P +
Sbjct: 3 VNECLDPTTCISGNCVNTPGSYICDCPPDFEL 34
Score = 23.3 bits (50), Expect = 5.1
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 133 VDLCDPNPCSHHHYCVDKGNTFACECPKGYQG 164
V+ C CV+ ++ C+CP ++
Sbjct: 3 VNECLDPTTCISGNCVNTPGSYICDCPPDFEL 34
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 24.3 bits (53), Expect = 1.7
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 59 DDCASSPCGHGICVDQTDGYRCYCQPGYSG 88
D+C + G+C + + C C P +
Sbjct: 3 DECENGGFCSGVCHNLPGTFECICGPDSAL 32
>d1nl1a2 g.32.1.1 (A:1-65) Prothrombin {Cow (Bos taurus) [TaxId:
9913]}
Length = 65
Score = 24.4 bits (53), Expect = 3.2
Identities = 4/20 (20%), Positives = 7/20 (35%)
Query: 92 QYEYNECESSPCLNGGSCSD 111
+Y E +P C +
Sbjct: 44 KYTACESARNPREKLNECLE 63
>d1ytqa1 b.11.1.1 (A:14-103) beta-Crystallin {Cow (Bos taurus)
[TaxId: 9913]}
Length = 90
Score = 24.4 bits (53), Expect = 4.3
Identities = 8/35 (22%), Positives = 11/35 (31%)
Query: 80 CYCQPGYSGEQCQYEYNECESSPCLNGGSCSDHVG 114
Y Q GEQ +E E +D +
Sbjct: 47 GYEQANCKGEQFVFEKGEYPRWDSWTSSRRTDSLS 81
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 55
Score = 23.7 bits (51), Expect = 4.7
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 24 PCQNGGSCAASNLTAQQFKCLCPPGFSGSLCQHNLDDCASSPCGHG 69
PC G SCA T + CP G +G C+ D P G
Sbjct: 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSN 47
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 41
Score = 23.2 bits (50), Expect = 5.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 58 LDDCASSPCGHGICVDQTDGYRCYCQPGY 86
+D+C +CV+ GY+C C+ G+
Sbjct: 1 IDECQDPDTCSQLCVNLEGGYKCQCEEGF 29
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 22.9 bits (49), Expect = 6.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 137 DPNPCSHHHYCVDKGNTFACECPKGYQG 164
+ + CS H C D F C C Y G
Sbjct: 5 NRHQCSVHAECRDYATGFCCRCVANYTG 32
Score = 22.9 bits (49), Expect = 6.6
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 54 CQHNLDDCASSPCGHGICVDQTDGYRCYCQPGYSG 88
C +N C+ H C D G+ C C Y+G
Sbjct: 2 CANNRHQCSV----HAECRDYATGFCCRCVANYTG 32
>d1j8ia_ d.9.1.1 (A:) Lymphotactin {Human (Homo sapiens) [TaxId:
9606]}
Length = 93
Score = 23.7 bits (51), Expect = 8.7
Identities = 4/18 (22%), Positives = 7/18 (38%)
Query: 160 KGYQGPNCDVPGIVFYLK 177
K Y + ++F K
Sbjct: 25 KTYTITEGSLRAVIFITK 42
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 24.5 bits (52), Expect = 9.2
Identities = 6/69 (8%), Positives = 19/69 (27%)
Query: 52 SLCQHNLDDCASSPCGHGICVDQTDGYRCYCQPGYSGEQCQYEYNECESSPCLNGGSCSD 111
+L + L DC+ G + G + ++ + ++ +
Sbjct: 64 TLSEQELVDCSFKNYGCNGGLINNAFEDMIELGGICPDGDYPYVSDAPNLCNIDRCTEKY 123
Query: 112 HVGRFSCTC 120
+ +
Sbjct: 124 GIKNYLSVP 132
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.141 0.513
Gapped
Lambda K H
0.267 0.0655 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 762,884
Number of extensions: 41366
Number of successful extensions: 617
Number of sequences better than 10.0: 1
Number of HSP's gapped: 466
Number of HSP's successfully gapped: 316
Length of query: 178
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 98
Effective length of database: 1,309,196
Effective search space: 128301208
Effective search space used: 128301208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.2 bits)