BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8282
(632 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UBN7|HDAC6_HUMAN Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=1 SV=2
Length = 1215
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/251 (59%), Positives = 188/251 (74%), Gaps = 3/251 (1%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLIL 424
++V++VL+GE +G A++RPPGHHAEQD CGFC FN+V+VAA++A + H L R+LI+
Sbjct: 588 RLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHAL-RILIV 646
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWDVHHGNGTQ MF +DP VLY+S+HRYDHG+FFP + +G G GF VNVAWN
Sbjct: 647 DWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWN 706
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
M D +Y+AA+ +++LPIAY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L
Sbjct: 707 GPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLL 766
Query: 545 KALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISS 604
LA GRIIL LEGGYN++SIS +M CT++LLGDP PLL S A+ SI ETI
Sbjct: 767 MGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQV 826
Query: 605 HKAYWSSLKFL 615
H+ YW SL+ +
Sbjct: 827 HRRYWRSLRVM 837
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 119/246 (48%), Positives = 165/246 (67%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DW
Sbjct: 193 RLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDW 252
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+
Sbjct: 253 DVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQV 312
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM D +YIAAF V+LP+A +F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 313 GMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMG 372
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES SA S+ + + +
Sbjct: 373 LAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALE 432
Query: 607 AYWSSL 612
+W L
Sbjct: 433 PFWEVL 438
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 105/140 (75%), Gaps = 3/140 (2%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLIL 212
+V++VL+GE +G A++RPPGHHAEQD CGFC FN+V+VAA++A + H L R+LI+
Sbjct: 588 RLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHAL-RILIV 646
Query: 213 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 272
DWDVHHGNGTQ MF +DP VLY+S+HRYDHG+FFP + +G G GF VNVAWN
Sbjct: 647 DWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWN 706
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D +Y+AA+ +++LP+
Sbjct: 707 GPRMGDADYLAAWHRLVLPI 726
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 99/138 (71%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
+VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DW
Sbjct: 193 RLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDW 252
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+
Sbjct: 253 DVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQV 312
Query: 275 GMSDPEYIAAFQQVILPM 292
GM D +YIAAF V+LP+
Sbjct: 313 GMRDADYIAAFLHVLLPV 330
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEG 354
+ H L R+LI+DWDVHHGNGTQ MF +DP VLY+S+HRYDHG+FFP + +G
Sbjct: 636 ISGHAL-RILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRA 694
Query: 355 KGEGFNVNVAWN 366
G GF VNVAWN
Sbjct: 695 AGTGFTVNVAWN 706
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 352
YA H + RVLI+DWDVHHG GTQ F DP VLY S+HRY+ G F+PH K + G
Sbjct: 237 YAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTG 296
Query: 353 EGKGEGFNVNVAWNKV 368
G+G+G+ +NV WN+V
Sbjct: 297 FGQGQGYTINVPWNQV 312
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLL 63
V CGRYI H + H ++ HPL LS+ DLS WCY C+AYV + L
Sbjct: 1151 VYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYVHHQAL 1195
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 39 PLALSFADLSVWCYVCEAYVDNHLLALLIYLYGVMYVNPMSII---ITEHPLALSFADLS 95
P+ + D++ C C +N + +Y Y+N + + HPL LS+ DLS
Sbjct: 1121 PIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLS 1180
Query: 96 VWCYVCEAYVDNHLL 110
WCY C+AYV + L
Sbjct: 1181 AWCYYCQAYVHHQAL 1195
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 132 HPLALSFADLSVWGYVCEPYVDNHVVDSVLN 162
HPL LS+ DLS W Y C+ YV + + V N
Sbjct: 1170 HPLVLSYIDLSAWCYYCQAYVHHQALLDVKN 1200
>sp|Q9Z2V5|HDAC6_MOUSE Histone deacetylase 6 OS=Mus musculus GN=Hdac6 PE=1 SV=3
Length = 1149
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/250 (56%), Positives = 182/250 (72%), Gaps = 1/250 (0%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLS-RVLILD 425
++V++VL+GE +G+A++RPPGHHAE + CGFC FN+V+VAA++A G + R+LI+D
Sbjct: 587 RLVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVD 646
Query: 426 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 485
WDVHHGNGTQ +F +DP VLY+S+HRYD G+FFP + VG G GF VNV WN
Sbjct: 647 WDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNG 706
Query: 486 KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLK 545
M D +Y+AA+ +++LPIAY+FNPELVL+SAG+DA DPLGGC+V+PE YAH TH L
Sbjct: 707 PRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLM 766
Query: 546 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSH 605
LA GRIIL LEGGYN++SIS +M CT +LLGDP P L S A+ SI E I H
Sbjct: 767 GLAGGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSISEVIQVH 826
Query: 606 KAYWSSLKFL 615
+ YW SL+ +
Sbjct: 827 RKYWRSLRLM 836
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/250 (48%), Positives = 176/250 (70%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+++ E +G+A+IRPPGHHA+ + G+C+FN+++VAA+YA H + RVLI+DW
Sbjct: 192 RLVDALMGAEIRNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDW 251
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ +F DP VLY S+HRY+HG F+PH K + +G G+G+G+ +NV WN+
Sbjct: 252 DVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQT 311
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM D +YIAAF ++LP+A +F P+LVLV+AG+DA DP G +P +AH TH L
Sbjct: 312 GMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMG 371
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES + +SA TSI T+ + +
Sbjct: 372 LAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQTSIYCTLEALE 431
Query: 607 AYWSSLKFLV 616
+W L+ V
Sbjct: 432 PFWEVLERSV 441
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 103/138 (74%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
+VD+++ E +G+A+IRPPGHHA+ + G+C+FN+++VAA+YA H + RVLI+DW
Sbjct: 192 RLVDALMGAEIRNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDW 251
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHG GTQ +F DP VLY S+HRY+HG F+PH K + +G G+G+G+ +NV WN+
Sbjct: 252 DVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQT 311
Query: 275 GMSDPEYIAAFQQVILPM 292
GM D +YIAAF ++LP+
Sbjct: 312 GMRDADYIAAFLHILLPV 329
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLS-RVLILD 213
+V++VL+GE +G+A++RPPGHHAE + CGFC FN+V+VAA++A G + R+LI+D
Sbjct: 587 RLVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVD 646
Query: 214 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 273
WDVHHGNGTQ +F +DP VLY+S+HRYD G+FFP + VG G GF VNV WN
Sbjct: 647 WDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNG 706
Query: 274 KGMSDPEYIAAFQQVILPM 292
M D +Y+AA+ +++LP+
Sbjct: 707 PRMGDADYLAAWHRLVLPI 725
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 352
YA H + RVLI+DWDVHHG GTQ +F DP VLY S+HRY+HG F+PH K + +G
Sbjct: 236 YAQKKHRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIG 295
Query: 353 EGKGEGFNVNVAWNKV 368
G+G+G+ +NV WN+
Sbjct: 296 FGQGQGYTINVPWNQT 311
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R+LI+DWDVHHGNGTQ +F +DP VLY+S+HRYD G+FFP + VG G GF V
Sbjct: 641 RILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTV 700
Query: 362 NVAWN 366
NV WN
Sbjct: 701 NVPWN 705
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYV 58
V C RY+ H + H ++EHPL LS DLS WCYVC+AYV
Sbjct: 1085 VYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYVCQAYV 1124
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 39 PLALSFADLSVWCYVCEAYVDNHLLALLIYLYGVMYVNPMSII---ITEHPLALSFADLS 95
P+ + D+S C C +N + +Y YVN + +EHPL LS DLS
Sbjct: 1055 PIPAAGLDVSQPCKTCGTVQENWVCLTCYQVYCSRYVNAHMVCHHEASEHPLVLSCVDLS 1114
Query: 96 VWCYVCEAYV 105
WCYVC+AYV
Sbjct: 1115 TWCYVCQAYV 1124
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 86 PLALSFADLSVWCYVCEAYVDNHLLALLIYLYGVMYVKPMSII---ITEHPLALSFADLS 142
P+ + D+S C C +N + +Y YV + +EHPL LS DLS
Sbjct: 1055 PIPAAGLDVSQPCKTCGTVQENWVCLTCYQVYCSRYVNAHMVCHHEASEHPLVLSCVDLS 1114
Query: 143 VWGYVCEPYVDNHVVDSVLNG 163
W YVC+ YV + + V N
Sbjct: 1115 TWCYVCQAYVHHEDLQDVKNA 1135
>sp|Q6P3E7|HDA10_MOUSE Histone deacetylase 10 OS=Mus musculus GN=Hdac10 PE=2 SV=2
Length = 666
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 121/251 (48%), Positives = 179/251 (71%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL G +G+A++RPPGHH+++ GFC+FNNV++AAK+A +GL R+LI+DW
Sbjct: 112 QLVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILIVDW 171
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q +F +DP VLY S HRY+HGSF+P ++ VG+G+G+GF VN+ WN+
Sbjct: 172 DVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQV 231
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE +AH T L+
Sbjct: 232 GMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQV 291
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA GRI LEGGY++ S++ ++ + + LLGDP P L + SA+ SI+ ++
Sbjct: 292 LAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQSVQTAQT 351
Query: 607 AYWSSLKFLVA 617
YW+SL+ VA
Sbjct: 352 PYWTSLQQNVA 362
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 104/138 (75%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
+VD+VL G +G+A++RPPGHH+++ GFC+FNNV++AAK+A +GL R+LI+DW
Sbjct: 112 QLVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILIVDW 171
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHG G Q +F +DP VLY S HRY+HGSF+P ++ VG+G+G+GF VN+ WN+
Sbjct: 172 DVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQV 231
Query: 275 GMSDPEYIAAFQQVILPM 292
GM + +Y+AAF V+LP+
Sbjct: 232 GMGNADYLAAFLHVLLPL 249
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 352
+A +GL R+LI+DWDVHHG G Q +F +DP VLY S HRY+HGSF+P ++ VG
Sbjct: 156 HAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVG 215
Query: 353 EGKGEGFNVNVAWNKV 368
+G+G+GF VN+ WN+V
Sbjct: 216 QGQGQGFTVNLPWNQV 231
>sp|Q969S8|HDA10_HUMAN Histone deacetylase 10 OS=Homo sapiens GN=HDAC10 PE=1 SV=1
Length = 669
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 172/247 (69%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL G +G+A++RPPGHH ++ GFC+FNNV++AA +A HGL R+L++DW
Sbjct: 112 QLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDW 171
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q +F +DP VLY S HRY+HG F+P +++ VG G+G GF VN+ WN+
Sbjct: 172 DVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQV 231
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF ++LP+A++F+PELVLVSAG+D+ + DP G + +PE +AH T L+
Sbjct: 232 GMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQV 291
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA GR+ LEGGY++ S++ ++ + + LLGDP P L + SA+ SI+ ++
Sbjct: 292 LAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQA 351
Query: 607 AYWSSLK 613
+W SL+
Sbjct: 352 PHWKSLQ 358
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 100/138 (72%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
+VD+VL G +G+A++RPPGHH ++ GFC+FNNV++AA +A HGL R+L++DW
Sbjct: 112 QLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDW 171
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHG G Q +F +DP VLY S HRY+HG F+P +++ VG G+G GF VN+ WN+
Sbjct: 172 DVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQV 231
Query: 275 GMSDPEYIAAFQQVILPM 292
GM + +Y+AAF ++LP+
Sbjct: 232 GMGNADYVAAFLHLLLPL 249
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 289 ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 348
I +A HGL R+L++DWDVHHG G Q +F +DP VLY S HRY+HG F+P +++
Sbjct: 152 IAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDA 211
Query: 349 HNVGEGKGEGFNVNVAWNKV 368
VG G+G GF VN+ WN+V
Sbjct: 212 DAVGRGQGLGFTVNLPWNQV 231
Score = 32.7 bits (73), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
+++ ++LP+AY F P+LVLV+ G + P A L+ LA GR+
Sbjct: 555 FLSCILGLVLPLAYGFQPDLVLVALGPGHGLQGP---------HAALLAAMLRGLAGGRV 605
Query: 553 ILALE 557
+ LE
Sbjct: 606 LALLE 610
>sp|Q20296|HDA6_CAEEL Histone deacetylase 6 OS=Caenorhabditis elegans GN=hda-6 PE=2 SV=2
Length = 955
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/266 (48%), Positives = 170/266 (63%), Gaps = 11/266 (4%)
Query: 367 KVVDSVLNGESAH--GVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLIL 424
+ VD + ++ + I+RPPGHHA + GFCIFNNV+VAAKYA H RVLIL
Sbjct: 536 QSVDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLIL 595
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWDVHHGNGTQ +FY D V+Y+S+HR+D G+F+P + +VGEG GEG +VNV ++
Sbjct: 596 DWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFS 655
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
M D EY AFQ+VI+PIAYQFNP+LVL+SAG+DA V+DPLG KV+PE +A T+ L
Sbjct: 656 GVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQL 715
Query: 545 KALAQGRIILALEGGYNISSIS-YAMTLCT--------KALLGDPLPLLESDLDINSSAV 595
+LA GRII LEGGYN++SIS A +C + L + I SS +
Sbjct: 716 SSLAGGRIITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCI 775
Query: 596 TSIKETISSHKAYWSSLKFLVALPEN 621
+I+E + + YWS LK P N
Sbjct: 776 KTIREVCAVQQKYWSILKGFQVTPSN 801
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 167/248 (67%), Gaps = 1/248 (0%)
Query: 368 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
+ + ++ E+++G A++RPPGHHA+ PCGFC+FNNV+ AA+ A + G R+LI+D D
Sbjct: 124 LTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLD 182
Query: 428 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 487
VHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G+N N+A N+ G
Sbjct: 183 VHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETG 242
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 547
+D +Y++ V+LP+A QF+P V++SAG+DA + DPLGG ++P+ Y+H + LK+L
Sbjct: 243 CTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSL 302
Query: 548 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKA 607
AQGR+++ LEGGYN + A+ C + LLG +E + S V S +S +
Sbjct: 303 AQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVSLVSVLRH 362
Query: 608 YWSSLKFL 615
+W+ +
Sbjct: 363 HWNCFDYF 370
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
Query: 157 VDSVLNGESAH--GVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
VD + ++ + I+RPPGHHA + GFCIFNNV+VAAKYA H RVLILDW
Sbjct: 538 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 597
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHGNGTQ +FY D V+Y+S+HR+D G+F+P + +VGEG GEG +VNV ++
Sbjct: 598 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGV 657
Query: 275 GMSDPEYIAAFQQVILPM 292
M D EY AFQ+VI+P+
Sbjct: 658 QMGDNEYQMAFQRVIMPI 675
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 101/137 (73%), Gaps = 1/137 (0%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+ + ++ E+++G A++RPPGHHA+ PCGFC+FNNV+ AA+ A + G R+LI+D D
Sbjct: 124 LTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLD 182
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G+N N+A N+ G
Sbjct: 183 VHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETG 242
Query: 276 MSDPEYIAAFQQVILPM 292
+D +Y++ V+LP+
Sbjct: 243 CTDSDYLSIIFHVLLPL 259
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 352
YA H RVLILDWDVHHGNGTQ +FY D V+Y+S+HR+D G+F+P + +VG
Sbjct: 582 YAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVG 641
Query: 353 EGKGEGFNVNVAWNKV 368
EG GEG +VNV ++ V
Sbjct: 642 EGAGEGMSVNVPFSGV 657
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 53/70 (75%)
Query: 299 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 358
G R+LI+D DVHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G
Sbjct: 172 GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLG 231
Query: 359 FNVNVAWNKV 368
+N N+A N+
Sbjct: 232 YNANLALNET 241
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 21 CGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLL 63
CGR++ EH+M+H +S+ HP+ALS ADLSVWCY C++YV N L
Sbjct: 895 CGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPAL 937
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 14/64 (21%)
Query: 47 LSVWCYVCEAYVDNHLLALLIYLYGVMYVNPMSIIITEHPLALSFADLSVWCYVCEAYVD 106
L+ + Y C +V+ H + M + + HP+ALS ADLSVWCY C++YV
Sbjct: 888 LTCYKYNCGRFVNEHAM--------------MHHLSSSHPMALSMADLSVWCYPCDSYVH 933
Query: 107 NHLL 110
N L
Sbjct: 934 NPAL 937
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 14/61 (22%)
Query: 94 LSVWCYVCEAYVDNHLLALLIYLYGVMYVKPMSIIITEHPLALSFADLSVWGYVCEPYVD 153
L+ + Y C +V+ H + M + + HP+ALS ADLSVW Y C+ YV
Sbjct: 888 LTCYKYNCGRFVNEHAM--------------MHHLSSSHPMALSMADLSVWCYPCDSYVH 933
Query: 154 N 154
N
Sbjct: 934 N 934
>sp|Q8RX28|HDA5_ARATH Histone deacetylase 5 OS=Arabidopsis thaliana GN=HDA5 PE=2 SV=1
Length = 660
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 155/216 (71%), Gaps = 3/216 (1%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH---GLSRVLI 423
K+ + V GE G AI+RPPGHHAE DE GFC+FNNV+VAA + L+ G+ ++LI
Sbjct: 135 KLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILI 194
Query: 424 LDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 483
+DWDVHHGNGTQ MF+ DPRVL+ SVHR+++G F+P D + VGEG GEGFN+NV W
Sbjct: 195 VDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPW 254
Query: 484 NKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHW 543
++ D +Y+AA+ +++P+A +FNP+++ +SAG+DA +NDPLGGC V+P Y+
Sbjct: 255 DQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKK 314
Query: 544 LKALAQGRIILALEGGYNISSISYAMTLCTKALLGD 579
L AQG+I+LALEGGYN+ SI+ + C + LL D
Sbjct: 315 LMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLED 350
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH---GLSRVLI 211
+ + V GE G AI+RPPGHHAE DE GFC+FNNV+VAA + L+ G+ ++LI
Sbjct: 135 KLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILI 194
Query: 212 LDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 271
+DWDVHHGNGTQ MF+ DPRVL+ SVHR+++G F+P D + VGEG GEGFN+NV W
Sbjct: 195 VDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPW 254
Query: 272 NKKGMSDPEYIAAFQQVILPM 292
++ D +Y+AA+ +++P+
Sbjct: 255 DQGRCGDADYLAAWDHILIPV 275
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%)
Query: 299 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 358
G+ ++LI+DWDVHHGNGTQ MF+ DPRVL+ SVHR+++G F+P D + VGEG GEG
Sbjct: 188 GVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEG 247
Query: 359 FNVNVAWNK 367
FN+NV W++
Sbjct: 248 FNINVPWDQ 256
>sp|Q8LRK8|HDA18_ARATH Histone deacetylase 18 OS=Arabidopsis thaliana GN=HDA18 PE=2 SV=1
Length = 682
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 167/261 (63%), Gaps = 9/261 (3%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH---GLSRVLI 423
KV + V GE G AI+RPPGHHAE DE GFC+FNNV+VAA + L+ + ++LI
Sbjct: 168 KVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILI 227
Query: 424 LDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 483
+DWD+HHGNGTQ MF+ D RVL SVHR+DHGSF+P D + VGEG GEGFN+NV W
Sbjct: 228 VDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPW 287
Query: 484 NKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHW 543
+ G D +Y+A + +++P+ +F P+++L+SAG+DA + DPLGGC V+P Y+
Sbjct: 288 EQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKK 347
Query: 544 LKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESD---LDINSSAVTSIKE 600
L A G+I+LALEGGYN+ S+ + C + LL D S+ L+ + +++E
Sbjct: 348 LMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLESTRRVIQAVRE 407
Query: 601 TISSHKAYWSSLKFLVALPEN 621
+ + YW SL +A EN
Sbjct: 408 RLCT---YWPSLDASMASNEN 425
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 98/141 (69%), Gaps = 3/141 (2%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH---GLSRVLI 211
V + V GE G AI+RPPGHHAE DE GFC+FNNV+VAA + L+ + ++LI
Sbjct: 168 KVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILI 227
Query: 212 LDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 271
+DWD+HHGNGTQ MF+ D RVL SVHR+DHGSF+P D + VGEG GEGFN+NV W
Sbjct: 228 VDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPW 287
Query: 272 NKKGMSDPEYIAAFQQVILPM 292
+ G D +Y+A + +++P+
Sbjct: 288 EQGGCGDADYLAVWNHILIPV 308
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ ++LI+DWD+HHGNGTQ MF+ D RVL SVHR+DHGSF+P D + VGEG GEGF
Sbjct: 222 VKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGF 281
Query: 360 NVNVAWNK 367
N+NV W +
Sbjct: 282 NINVPWEQ 289
>sp|P83038|HDAC4_CHICK Histone deacetylase 4 OS=Gallus gallus GN=HDAC4 PE=2 SV=1
Length = 1080
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 174/282 (61%), Gaps = 26/282 (9%)
Query: 356 GEGFNVNVAWNKV----------------VDSVLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN+V V V GE +G A++RPPGHHAE+ P GF
Sbjct: 749 GVGVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGF 808
Query: 400 CIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 459
C FN+V++AAK +S++LI+DWDVHHGNGTQ FYNDP VLYIS+HRYD G+FFP
Sbjct: 809 CYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFP 868
Query: 460 HSKDAGPHNVGEGKGEGFNVNVAWN---KKGMSDPEYIAAFQQVILPIAYQFNPELVLVS 516
S P VG G G GFNVN+A+ M D EY+ AF+ V++PIA +F P++VLVS
Sbjct: 869 GS--GAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVS 926
Query: 517 AGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTK 574
+G+DA PLGG +S + + + T L LA GR++LALEGG+++++I A C
Sbjct: 927 SGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVS 986
Query: 575 ALLG---DPLPLLESDLDINSSAVTSIKETISSHKAYWSSLK 613
ALLG DPLP N++AV S+++ I H YW SL+
Sbjct: 987 ALLGNELDPLPEKVLQQRANANAVHSMEKVIEIHSKYWHSLQ 1028
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 97/140 (69%), Gaps = 5/140 (3%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DWD
Sbjct: 777 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWD 836
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 837 VHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGL 894
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D EY+ AF+ V++P+
Sbjct: 895 DPPMGDTEYLTAFRTVVMPI 914
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+S++LI+DWDVHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GF
Sbjct: 827 VSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGF 884
Query: 360 NVNVAWNKVVD 370
NVN+A+ +D
Sbjct: 885 NVNMAFTGGLD 895
>sp|P56524|HDAC4_HUMAN Histone deacetylase 4 OS=Homo sapiens GN=HDAC4 PE=1 SV=3
Length = 1084
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 177/296 (59%), Gaps = 26/296 (8%)
Query: 356 GEGFNVNVAWNKV----------------VDSVLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN+V V V GE +G A++RPPGHHAE+ P GF
Sbjct: 753 GVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGF 812
Query: 400 CIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 459
C FN+V+VAAK +S++LI+DWDVHHGNGTQ FY+DP VLY+S+HRYD G+FFP
Sbjct: 813 CYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFP 872
Query: 460 HSKDAGPHNVGEGKGEGFNVNVAWN---KKGMSDPEYIAAFQQVILPIAYQFNPELVLVS 516
S P VG G G GFNVN+A+ M D EY+AAF+ V++PIA +F P++VLVS
Sbjct: 873 GS--GAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVS 930
Query: 517 AGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTK 574
+G+DA PLGG +S + + T L LA GRI+LALEGG+++++I A C
Sbjct: 931 SGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVS 990
Query: 575 ALLG---DPLPLLESDLDINSSAVTSIKETISSHKAYWSSLKFLVALPENKLLSAD 627
ALLG DPLP N++AV S+++ + H YW L+ + L+ A
Sbjct: 991 ALLGNELDPLPEKVLQQRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSLIEAQ 1046
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 98/140 (70%), Gaps = 5/140 (3%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V+VAAK +S++LI+DWD
Sbjct: 781 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWD 840
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 841 VHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGL 898
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D EY+AAF+ V++P+
Sbjct: 899 DPPMGDAEYLAAFRTVVMPI 918
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+S++LI+DWDVHHGNGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GF
Sbjct: 831 VSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGF 888
Query: 360 NVNVAWNKVVD 370
NVN+A+ +D
Sbjct: 889 NVNMAFTGGLD 899
>sp|Q6NZM9|HDAC4_MOUSE Histone deacetylase 4 OS=Mus musculus GN=Hdac4 PE=1 SV=1
Length = 1076
Score = 241 bits (616), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 184/299 (61%), Gaps = 26/299 (8%)
Query: 356 GEGFNVNVAWNKV----------------VDSVLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN+V V V GE +G A++RPPGHHAE+ P GF
Sbjct: 745 GVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGF 804
Query: 400 CIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 459
C FN+V+VAAK +S++LI+DWDVHHGNGTQ FYNDP VLY+S+HRYD G+FFP
Sbjct: 805 CYFNSVAVAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFP 864
Query: 460 HSKDAGPHNVGEGKGEGFNVNVAWN---KKGMSDPEYIAAFQQVILPIAYQFNPELVLVS 516
S P VG G G GFNVN+A+ + M D EY+AAF+ V++PIA +F P++VLVS
Sbjct: 865 GS--GAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVS 922
Query: 517 AGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTK 574
+G+DA PLGG +S + + + T L LA GR++LALEGG+++++I A C
Sbjct: 923 SGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVS 982
Query: 575 ALLGDPL-PLLESDL--DINSSAVTSIKETISSHKAYWSSLKFLVALPENKLLSADYAQ 630
ALLG+ L PL E L N++AV S+++ + H YW L+ L + + L+ A +
Sbjct: 983 ALLGNELEPLPEKVLHQRPNANAVHSMEKVMDIHSKYWRCLQRLSSTVGHSLIEAQKCE 1041
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 5/140 (3%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V+VAAK +S++LI+DWD
Sbjct: 773 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIVDWD 832
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 833 VHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGL 890
Query: 273 KKGMSDPEYIAAFQQVILPM 292
+ M D EY+AAF+ V++P+
Sbjct: 891 EPPMGDAEYLAAFRTVVMPI 910
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+S++LI+DWDVHHGNGTQ FYNDP VLY+S+HRYD G+FFP S P VG G G GF
Sbjct: 823 VSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGF 880
Query: 360 NVNVAWN 366
NVN+A+
Sbjct: 881 NVNMAFT 887
>sp|Q99P99|HDAC4_RAT Histone deacetylase 4 OS=Rattus norvegicus GN=Hdac4 PE=1 SV=2
Length = 1077
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 177/284 (62%), Gaps = 26/284 (9%)
Query: 356 GEGFNVNVAWNKV----------------VDSVLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN+V V V GE +G A++RPPGHHAE+ P GF
Sbjct: 746 GVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGF 805
Query: 400 CIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 459
C FN+V++AAK +S++LI+DWDVHHGNGTQ FYNDP VLY+S+HRYD G+FFP
Sbjct: 806 CYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFP 865
Query: 460 HSKDAGPHNVGEGKGEGFNVNVAWN---KKGMSDPEYIAAFQQVILPIAYQFNPELVLVS 516
S P VG G G GFNVN+A+ M D EY+AAF+ V++PIA +F P++VLVS
Sbjct: 866 GS--GAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVS 923
Query: 517 AGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTK 574
+G+DA PLGG +S + + + T L LA GRI+LALEGG+++++I A C
Sbjct: 924 SGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVS 983
Query: 575 ALLGDPL-PLLESDL--DINSSAVTSIKETISSHKAYWSSLKFL 615
ALLG+ L PL E L N++AV S+++ + H YW L+ L
Sbjct: 984 ALLGNELEPLPEKVLHQRPNANAVHSMEKVMGIHSEYWRCLQRL 1027
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 98/140 (70%), Gaps = 5/140 (3%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DWD
Sbjct: 774 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWD 833
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 834 VHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGL 891
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D EY+AAF+ V++P+
Sbjct: 892 DPPMGDAEYLAAFRTVVMPI 911
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+S++LI+DWDVHHGNGTQ FYNDP VLY+S+HRYD G+FFP S P VG G G GF
Sbjct: 824 VSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGF 881
Query: 360 NVNVAWNKVVD 370
NVN+A+ +D
Sbjct: 882 NVNMAFTGGLD 892
>sp|Q9UKV0|HDAC9_HUMAN Histone deacetylase 9 OS=Homo sapiens GN=HDAC9 PE=1 SV=2
Length = 1011
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 168/256 (65%), Gaps = 13/256 (5%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++ V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D
Sbjct: 760 ELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDL 819
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW
Sbjct: 820 DVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGG 877
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACV--NDPLGGCKVSPEAYAHFT 541
M D EY+ AF+ ++ P+A +F+P++VLVSAG+DA PLGG KV+ + + H T
Sbjct: 878 LDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLT 937
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDL---DINSSAVTSI 598
L LA GR++LALEGG+++++I A C ALLG+ L L D+ N +AV S+
Sbjct: 938 KQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQSPNMNAVISL 997
Query: 599 KETISSHKAYWSSLKF 614
++ I + SLKF
Sbjct: 998 QKII---EIQSMSLKF 1010
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 96/141 (68%), Gaps = 5/141 (3%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
+ V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D
Sbjct: 760 ELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDL 819
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 272
DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW
Sbjct: 820 DVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGG 877
Query: 273 -KKGMSDPEYIAAFQQVILPM 292
M D EY+ AF+ ++ P+
Sbjct: 878 LDPPMGDVEYLEAFRTIVKPV 898
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 288 VILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAG 347
I Y D +S++LI+D DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S
Sbjct: 799 AITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GA 856
Query: 348 PHNVGEGKGEGFNVNVAWNKVVD 370
P+ VG G GEG+N+N+AW +D
Sbjct: 857 PNEVGTGLGEGYNINIAWTGGLD 879
>sp|P56523|CLR3_SCHPO Histone deacetylase clr3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr3 PE=1 SV=1
Length = 687
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 159/249 (63%), Gaps = 3/249 (1%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDN--HGLSRVLIL 424
+ +V+ G+ + A++RPPGHHAE +P GFC+FNNVSV A+ L + RVLI+
Sbjct: 172 ETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIV 231
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWD+HHGNGTQ FY+DP VLY+S+HRY++G F+P + N GEG G G VN+ W+
Sbjct: 232 DWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWS 291
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
GM D +YI AFQ+V++P+AY+F+P+LV+VS G+DA D +G ++P AYAH T L
Sbjct: 292 CAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQML 351
Query: 545 KALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISS 604
LA G++ ++LEGGYN+ SIS + ++LLG P L + AV +I
Sbjct: 352 MGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGRLHTTYAC-PQAVATINHVTKI 410
Query: 605 HKAYWSSLK 613
YW ++
Sbjct: 411 QSQYWRCMR 419
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 98/141 (69%), Gaps = 3/141 (2%)
Query: 159 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDN--HGLSRVLILDWDV 216
+V+ G+ + A++RPPGHHAE +P GFC+FNNVSV A+ L + RVLI+DWD+
Sbjct: 176 AVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDI 235
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQ FY+DP VLY+S+HRY++G F+P + N GEG G G VN+ W+ GM
Sbjct: 236 HHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGM 295
Query: 277 SDPEYIAAFQQVILPM-YALD 296
D +YI AFQ+V++P+ Y D
Sbjct: 296 GDGDYIYAFQRVVMPVAYEFD 316
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ RVLI+DWD+HHGNGTQ FY+DP VLY+S+HRY++G F+P + N GEG G G
Sbjct: 225 IKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGR 284
Query: 360 NVNVAWN 366
VN+ W+
Sbjct: 285 TVNIPWS 291
>sp|P53973|HDA1_YEAST Histone deacetylase HDA1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HDA1 PE=1 SV=1
Length = 706
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 158/246 (64%), Gaps = 3/246 (1%)
Query: 371 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLILDWDV 428
+V+ G + +A++RPPGHHAE GFC+F+NV+VAAK L N+ + R++ILDWD+
Sbjct: 187 AVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDI 246
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHGNGTQ FY D +VLY+S+HR++ G ++P + GEGKGEGFN N+ W G+
Sbjct: 247 HHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITWPVGGV 306
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
D EY+ AF+QV++P+ +F P+LV++S+G+DA D +G C V+P Y H TH LK+LA
Sbjct: 307 GDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA 366
Query: 549 QGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDL-DINSSAVTSIKETISSHKA 607
+G + + LEGGYN+ +I+ + K L+G+P L L D + I + I
Sbjct: 367 RGNLCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLSDPKPEVIEMIDKVIRLQSK 426
Query: 608 YWSSLK 613
YW+ +
Sbjct: 427 YWNCFR 432
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Query: 159 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLILDWDV 216
+V+ G + +A++RPPGHHAE GFC+F+NV+VAAK L N+ + R++ILDWD+
Sbjct: 187 AVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDI 246
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQ FY D +VLY+S+HR++ G ++P + GEGKGEGFN N+ W G+
Sbjct: 247 HHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITWPVGGV 306
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+QV++PM
Sbjct: 307 GDAEYMWAFEQVVMPM 322
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 298 HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGE 357
+ R++ILDWD+HHGNGTQ FY D +VLY+S+HR++ G ++P + GEGKGE
Sbjct: 234 ESVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGE 293
Query: 358 GFNVNVAW 365
GFN N+ W
Sbjct: 294 GFNCNITW 301
>sp|Q8C2B3|HDAC7_MOUSE Histone deacetylase 7 OS=Mus musculus GN=Hdac7 PE=1 SV=2
Length = 938
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 175/291 (60%), Gaps = 28/291 (9%)
Query: 356 GEGFNVNVAWNKVVDS----------------VLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN++ S V + E +G A++RPPGHHA+ GF
Sbjct: 607 GVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGF 666
Query: 400 CIFNNVSVAAKYALDNHG-LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFF 458
C FN+V++A + L HG S++LI+DWDVHHGNGTQ FY DP VLYIS+HR+D G+FF
Sbjct: 667 CFFNSVAIACRQ-LQQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFF 725
Query: 459 PHSKDAGPHNVGEGKGEGFNVNVAWN---KKGMSDPEYIAAFQQVILPIAYQFNPELVLV 515
P S VG G GEGFNVNVAW M DPEY+AAF+ V++PIA +F P+LVLV
Sbjct: 726 PGSGAV--DEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLV 783
Query: 516 SAGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCT 573
SAG+DA PLGG VS + + + T L LA G ++LALEGG+++++I A C
Sbjct: 784 SAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACV 843
Query: 574 KALLG---DPLPLLESDLDINSSAVTSIKETISSHKAYWSSLKFLVALPEN 621
ALLG DPL N SA+ S++ + H+ YW ++ L + P++
Sbjct: 844 AALLGNKVDPLSEESWKQKPNLSAIRSLEAVVRVHRKYWGCMQRLASCPDS 894
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 95/137 (69%), Gaps = 7/137 (5%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG-LSRVLILDWDVHH 218
V + E +G A++RPPGHHA+ GFC FN+V++A + L HG S++LI+DWDVHH
Sbjct: 639 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQ-LQQHGKASKILIVDWDVHH 697
Query: 219 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKG 275
GNGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW
Sbjct: 698 GNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAV--DEVGTGSGEGFNVNVAWAGGLDPP 755
Query: 276 MSDPEYIAAFQQVILPM 292
M DPEY+AAF+ V++P+
Sbjct: 756 MGDPEYLAAFRIVVMPI 772
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 285 FQQVILPMYALDNHG-LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + L HG S++LI+DWDVHHGNGTQ FY DP VLYIS+HR+D G+FFP S
Sbjct: 669 FNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS 728
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKVVDSVL 373
VG G GEGFNVNVAW +D +
Sbjct: 729 GAV--DEVGTGSGEGFNVNVAWAGGLDPPM 756
>sp|Q80ZH1|HDAC5_CRIGR Histone deacetylase 5 OS=Cricetulus griseus GN=HDAC5 PE=2 SV=1
Length = 1111
Score = 231 bits (590), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 172/284 (60%), Gaps = 30/284 (10%)
Query: 356 GEGFNVNVAWNKVVDS----------------VLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN++ S V GE +G AIIRPPGHHAE+ GF
Sbjct: 772 GIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGF 831
Query: 400 CIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 459
C FN+V++ AK + +VLI+DWD+HHGNGTQ FY+DP VLYIS+HRYD+G+FFP
Sbjct: 832 CFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFP 891
Query: 460 HSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP-----EYIAAFQQVILPIAYQFNPELVL 514
S P VG G G G+NVNVAW G DP EY+ AF+ V++PIA++F+P++VL
Sbjct: 892 GS--GAPEEVGGGPGMGYNVNVAWT--GGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVL 947
Query: 515 VSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLC 572
VSAG+DA PLGG V+ + H T L LA GR++LALEGG+++++I A C
Sbjct: 948 VSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEAC 1007
Query: 573 TKALLGDPL-PLLESDLDINSS--AVTSIKETISSHKAYWSSLK 613
ALL L PL E+ L S AV ++++ I +WS ++
Sbjct: 1008 VSALLSVELQPLDEAVLQQKPSINAVATLEKVIEIQSKHWSCVQ 1051
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 94/138 (68%), Gaps = 9/138 (6%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 804 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHG 863
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 279
NGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW G DP
Sbjct: 864 NGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMGYNVNVAWT--GGVDP 919
Query: 280 -----EYIAAFQQVILPM 292
EY+ AF+ V++P+
Sbjct: 920 PIGDVEYLTAFRTVVMPI 937
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
+VLI+DWD+HHGNGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NV
Sbjct: 852 KVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMGYNV 909
Query: 362 NVAWNKVVD 370
NVAW VD
Sbjct: 910 NVAWTGGVD 918
>sp|Q8WUI4|HDAC7_HUMAN Histone deacetylase 7 OS=Homo sapiens GN=HDAC7 PE=1 SV=2
Length = 952
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 172/290 (59%), Gaps = 26/290 (8%)
Query: 356 GEGFNVNVAWNKVVDS----------------VLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN++ S V + E +G A++RPPGHHA+ GF
Sbjct: 620 GVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGF 679
Query: 400 CIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 459
C FN+V++A + S++LI+DWDVHHGNGTQ FY DP VLYIS+HR+D G+FFP
Sbjct: 680 CFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFP 739
Query: 460 HSKDAGPHNVGEGKGEGFNVNVAWN---KKGMSDPEYIAAFQQVILPIAYQFNPELVLVS 516
S VG G GEGFNVNVAW M DPEY+AAF+ V++PIA +F+P+LVLVS
Sbjct: 740 GSGAV--DEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVS 797
Query: 517 AGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTK 574
AG+DA PLGG VS + + + T L LA G ++LALEGG+++++I A C
Sbjct: 798 AGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVA 857
Query: 575 ALLG---DPLPLLESDLDINSSAVTSIKETISSHKAYWSSLKFLVALPEN 621
ALLG DPL N +A+ S++ I H YW ++ L + P++
Sbjct: 858 ALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQRLASCPDS 907
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V + E +G A++RPPGHHA+ GFC FN+V++A + S++LI+DWDVHHG
Sbjct: 652 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHG 711
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW M
Sbjct: 712 NGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAV--DEVGAGSGEGFNVNVAWAGGLDPPM 769
Query: 277 SDPEYIAAFQQVILPM 292
DPEY+AAF+ V++P+
Sbjct: 770 GDPEYLAAFRIVVMPI 785
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
S++LI+DWDVHHGNGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFN
Sbjct: 699 SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAV--DEVGAGSGEGFN 756
Query: 361 VNVAWNKVVD 370
VNVAW +D
Sbjct: 757 VNVAWAGGLD 766
>sp|Q569C4|HDA10_RAT Histone deacetylase 10 OS=Rattus norvegicus GN=Hdac10 PE=2 SV=1
Length = 588
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 140/189 (74%)
Query: 369 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 428
VD+VL G +GVA++RPPGHH+++ GFC+FNNV++AA++A +GL R+LI+DWDV
Sbjct: 114 VDAVLTGAVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVDWDV 173
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHG G Q +F +DP VLY S HRY+HG+F+P ++ VG G+G+GF VN+ WN+ GM
Sbjct: 174 HHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGM 233
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
+ +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE +AH T L+ LA
Sbjct: 234 GNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLA 293
Query: 549 QGRIILALE 557
GRI LE
Sbjct: 294 GGRICAVLE 302
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 102/136 (75%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
VD+VL G +GVA++RPPGHH+++ GFC+FNNV++AA++A +GL R+LI+DWDV
Sbjct: 114 VDAVLTGAVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVDWDV 173
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHG G Q +F +DP VLY S HRY+HG+F+P ++ VG G+G+GF VN+ WN+ GM
Sbjct: 174 HHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGM 233
Query: 277 SDPEYIAAFQQVILPM 292
+ +Y+AAF V+LP+
Sbjct: 234 GNADYLAAFLHVLLPL 249
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 56/80 (70%)
Query: 289 ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 348
I +A +GL R+LI+DWDVHHG G Q +F +DP VLY S HRY+HG+F+P ++
Sbjct: 152 IAARHAKQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDA 211
Query: 349 HNVGEGKGEGFNVNVAWNKV 368
VG G+G+GF VN+ WN+V
Sbjct: 212 DTVGRGRGQGFTVNLPWNQV 231
>sp|Q9UQL6|HDAC5_HUMAN Histone deacetylase 5 OS=Homo sapiens GN=HDAC5 PE=1 SV=2
Length = 1122
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 174/288 (60%), Gaps = 30/288 (10%)
Query: 356 GEGFNVNVAWNKVVDS----------------VLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN++ S V GE +G AIIRPPGHHAE+ GF
Sbjct: 783 GIGVDSDTVWNEMHSSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGF 842
Query: 400 CIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 459
C FN+V++ AK + +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP
Sbjct: 843 CFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFP 902
Query: 460 HSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP-----EYIAAFQQVILPIAYQFNPELVL 514
S P VG G G G+NVNVAW G DP EY+ AF+ V++PIA++F+P++VL
Sbjct: 903 GS--GAPEEVGGGPGVGYNVNVAWT--GGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVL 958
Query: 515 VSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLC 572
VSAG+DA PLGG V+ + H T L LA GR++LALEGG+++++I A C
Sbjct: 959 VSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEAC 1018
Query: 573 TKALLGDPL-PLLESDLDI--NSSAVTSIKETISSHKAYWSSLKFLVA 617
ALL L PL E+ L N +AV ++++ I +WS ++ A
Sbjct: 1019 VSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQKFAA 1066
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 94/138 (68%), Gaps = 9/138 (6%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 815 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHG 874
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 279
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW G DP
Sbjct: 875 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWT--GGVDP 930
Query: 280 -----EYIAAFQQVILPM 292
EY+ AF+ V++P+
Sbjct: 931 PIGDVEYLTAFRTVVMPI 948
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
+VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NV
Sbjct: 863 KVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNV 920
Query: 362 NVAWNKVVD 370
NVAW VD
Sbjct: 921 NVAWTGGVD 929
>sp|Q9Z2V6|HDAC5_MOUSE Histone deacetylase 5 OS=Mus musculus GN=Hdac5 PE=1 SV=2
Length = 1113
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 172/288 (59%), Gaps = 30/288 (10%)
Query: 356 GEGFNVNVAWNKVVDS----------------VLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN++ S V GE +G AIIRPPGHHAE+ GF
Sbjct: 774 GIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGF 833
Query: 400 CIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 459
C FN+V++ AK + +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP
Sbjct: 834 CFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFP 893
Query: 460 HSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP-----EYIAAFQQVILPIAYQFNPELVL 514
S P VG G G G+NVNVAW G DP EY+ AF+ V++PIA +F+P++VL
Sbjct: 894 GS--GAPEEVGGGPGVGYNVNVAWT--GGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVL 949
Query: 515 VSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLC 572
VSAG+DA PLGG V+ + H T L LA GR++LALEGG+++++I A C
Sbjct: 950 VSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEAC 1009
Query: 573 TKALLGDPL-PLLESDLDINSS--AVTSIKETISSHKAYWSSLKFLVA 617
ALL L PL E+ L S AV ++++ I +WS ++ A
Sbjct: 1010 VSALLSVELQPLDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAA 1057
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 94/138 (68%), Gaps = 9/138 (6%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 806 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHG 865
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 279
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW G DP
Sbjct: 866 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWT--GGVDP 921
Query: 280 -----EYIAAFQQVILPM 292
EY+ AF+ V++P+
Sbjct: 922 PIGDVEYLTAFRTVVMPI 939
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
+VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NV
Sbjct: 854 KVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNV 911
Query: 362 NVAWNKVVD 370
NVAW VD
Sbjct: 912 NVAWTGGVD 920
>sp|O17323|HDA4_CAEEL Histone deacetylase 4 OS=Caenorhabditis elegans GN=hda-4 PE=1 SV=3
Length = 869
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 161/255 (63%), Gaps = 11/255 (4%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLIL 424
++ V G +G A IRPPGHHAE ++ GFC FNNV+VA K + +++ I+
Sbjct: 585 ELSSQVAEGRLKNGFACIRPPGHHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAII 644
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWDVHHGNGTQ F NDP VLY+S+HR+D G+FFP + VG+ +G VNV ++
Sbjct: 645 DWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTGSVT--EVGKNDAKGLTVNVPFS 702
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTH 542
M DPEY+AA++ VI P+ F P+ ++VSAG+DAC P LGG +V+PE + + T
Sbjct: 703 GDVMRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTK 762
Query: 543 WLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDP-----LPLLESDLDINSSAVTS 597
L A G+++LALEGGY++ SIS A C +AL+G+ L + + N SAV +
Sbjct: 763 SLLNYASGKVVLALEGGYDLKSISEAAQQCVQALIGESDDAGRLSSVALESLPNPSAVET 822
Query: 598 IKETISSHKAYWSSL 612
+++ I+ HK+YW +L
Sbjct: 823 LQKVIAIHKSYWPAL 837
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 89/137 (64%), Gaps = 4/137 (2%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLILDWDVH 217
V G +G A IRPPGHHAE ++ GFC FNNV+VA K + +++ I+DWDVH
Sbjct: 590 VAEGRLKNGFACIRPPGHHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVH 649
Query: 218 HGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 277
HGNGTQ F NDP VLY+S+HR+D G+FFP + VG+ +G VNV ++ M
Sbjct: 650 HGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTGSVT--EVGKNDAKGLTVNVPFSGDVMR 707
Query: 278 DPEYIAAFQQVILPMYA 294
DPEY+AA++ VI P+ A
Sbjct: 708 DPEYLAAWRTVIEPVMA 724
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 16/87 (18%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
+++ I+DWDVHHGNGTQ F NDP VLY+S+HR+D G+FFP + VG+ +G
Sbjct: 639 AKIAIIDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTGSVT--EVGKNDAKGLT 696
Query: 361 VNV--------------AWNKVVDSVL 373
VNV AW V++ V+
Sbjct: 697 VNVPFSGDVMRDPEYLAAWRTVIEPVM 723
>sp|Q613L4|HDA4_CAEBR Histone deacetylase 4 OS=Caenorhabditis briggsae GN=hda-4 PE=3 SV=1
Length = 892
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 167/256 (65%), Gaps = 13/256 (5%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGL--SRVLIL 424
++ V G +G A IRPPGHHAE ++ GFC FNNV+V AK + + +++ I+
Sbjct: 605 ELSSQVAEGRLKNGFACIRPPGHHAEAEQALGFCFFNNVAVTAKVLQAKYPVQCAKIAII 664
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWDVHHGNGTQ F +DP VLY+S+HR+D+G+FFP + +G+G G+GF+VN+ ++
Sbjct: 665 DWDVHHGNGTQLSFDDDPNVLYMSLHRHDNGNFFPGTGSVT--EIGKGAGKGFSVNIPFS 722
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDAC---VNDPLGGCKVSPEAYAHFT 541
M D EY+AA++ V+ P+ F P+ +LVSAG+DAC VN LGG +++PE + + T
Sbjct: 723 GGVMKDAEYLAAWRTVVEPVLASFCPDFILVSAGFDACHGHVN-ALGGYEITPEMFGYMT 781
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLG---DPLPLLESDLD--INSSAVT 596
L + A G+++LALEGGYN+ SIS A C +AL+G D L L+ N SA+
Sbjct: 782 KCLLSYANGKVVLALEGGYNLDSISAAAEQCVQALIGESDDAGRLCTDSLENLPNQSALE 841
Query: 597 SIKETISSHKAYWSSL 612
++++ I+ HK +W +L
Sbjct: 842 TLQKVIAIHKGFWPAL 857
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 94/137 (68%), Gaps = 4/137 (2%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGL--SRVLILDWDVH 217
V G +G A IRPPGHHAE ++ GFC FNNV+V AK + + +++ I+DWDVH
Sbjct: 610 VAEGRLKNGFACIRPPGHHAEAEQALGFCFFNNVAVTAKVLQAKYPVQCAKIAIIDWDVH 669
Query: 218 HGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 277
HGNGTQ F +DP VLY+S+HR+D+G+FFP + +G+G G+GF+VN+ ++ M
Sbjct: 670 HGNGTQLSFDDDPNVLYMSLHRHDNGNFFPGTGSVT--EIGKGAGKGFSVNIPFSGGVMK 727
Query: 278 DPEYIAAFQQVILPMYA 294
D EY+AA++ V+ P+ A
Sbjct: 728 DAEYLAAWRTVVEPVLA 744
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 16/87 (18%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
+++ I+DWDVHHGNGTQ F +DP VLY+S+HR+D+G+FFP + +G+G G+GF+
Sbjct: 659 AKIAIIDWDVHHGNGTQLSFDDDPNVLYMSLHRHDNGNFFPGTGSVT--EIGKGAGKGFS 716
Query: 361 VNV--------------AWNKVVDSVL 373
VN+ AW VV+ VL
Sbjct: 717 VNIPFSGGVMKDAEYLAAWRTVVEPVL 743
>sp|Q5R902|HDAC5_PONAB Histone deacetylase 5 OS=Pongo abelii GN=HDAC5 PE=2 SV=1
Length = 1122
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 174/288 (60%), Gaps = 30/288 (10%)
Query: 356 GEGFNVNVAWNKVVDS----------------VLNGESAHGVAIIRPPGHHAEQDEPCGF 399
G G + + WN++ S V GE +G AIIRPPGHHAE+ GF
Sbjct: 783 GIGVDSDTVWNEMHSSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGF 842
Query: 400 CIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 459
C FN+V++ AK + +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP
Sbjct: 843 CFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFP 902
Query: 460 HSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP-----EYIAAFQQVILPIAYQFNPELVL 514
S P VG G G G+NVNVAW G DP EY+ AF+ V++PIA++F+P++VL
Sbjct: 903 GS--GAPEEVGGGPGVGYNVNVAW--IGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVL 958
Query: 515 VSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLC 572
VSAG+DA PLGG V+ + H T L LA GR++LALEGG+++++I A C
Sbjct: 959 VSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEAC 1018
Query: 573 TKALLGDPL-PLLESDLDI--NSSAVTSIKETISSHKAYWSSLKFLVA 617
ALL L PL E+ L N +AV ++++ I +WS ++ A
Sbjct: 1019 VSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQKFAA 1066
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 94/138 (68%), Gaps = 9/138 (6%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 815 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHG 874
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 279
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW G DP
Sbjct: 875 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAW--IGGVDP 930
Query: 280 -----EYIAAFQQVILPM 292
EY+ AF+ V++P+
Sbjct: 931 PIGDVEYLTAFRTVVMPI 948
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
+VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NV
Sbjct: 863 KVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNV 920
Query: 362 NVAWNKVVD 370
NVAW VD
Sbjct: 921 NVAWIGGVD 929
>sp|Q8GXJ1|HDA15_ARATH Histone deacetylase 15 OS=Arabidopsis thaliana GN=HDA15 PE=2 SV=2
Length = 552
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 159/261 (60%), Gaps = 8/261 (3%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
+ G +G A++RPPGHHA GFC+ NN +VAA A +VLI+DWDVHHG
Sbjct: 259 IFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAG-AKKVLIVDWDVHHG 317
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 491
NGTQ +F + VLYIS+HR++ G+F+P + A VG GEG+ VNV W+ G+ D
Sbjct: 318 NGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAA--DEVGSNGGEGYCVNVPWSCGGVGDK 375
Query: 492 EYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR 551
+YI AFQ V+LPIA F+P+ V++SAG+DA DPLG C V+P Y+ T L L G+
Sbjct: 376 DYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGK 435
Query: 552 IILALEGGYNISSISYAMTLCTKALLGD-PLPLLESDLDINSSAVTSIKETISSHKAYWS 610
+++ LEGGYN+ SIS + T K LLG+ P L + + + ++ + ++ +W
Sbjct: 436 MLVILEGGYNLRSISASATAVIKVLLGENPENELPIATTPSVAGLQTVLDVLNIQLEFWP 495
Query: 611 SLKFLVALPENKLLSADYAQL 631
SL A+ +KLLS A+L
Sbjct: 496 SL----AISYSKLLSELEARL 512
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
+ G +G A++RPPGHHA GFC+ NN +VAA A +VLI+DWDVHHG
Sbjct: 259 IFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAG-AKKVLIVDWDVHHG 317
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 279
NGTQ +F + VLYIS+HR++ G+F+P + A VG GEG+ VNV W+ G+ D
Sbjct: 318 NGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAA--DEVGSNGGEGYCVNVPWSCGGVGDK 375
Query: 280 EYIAAFQQVILPM 292
+YI AFQ V+LP+
Sbjct: 376 DYIFAFQHVVLPI 388
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
+VLI+DWDVHHGNGTQ +F + VLYIS+HR++ G+F+P + A VG GEG+
Sbjct: 305 KKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAA--DEVGSNGGEGYC 362
Query: 361 VNVAWN 366
VNV W+
Sbjct: 363 VNVPWS 368
>sp|Q941D6|HDA14_ARATH Histone deacetylase 14 OS=Arabidopsis thaliana GN=HDA14 PE=2 SV=1
Length = 423
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 126/204 (61%), Gaps = 10/204 (4%)
Query: 380 GVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFY 439
G A+IRPPGHHA P GFC+F NV++AA++A HGL R+ I+D+DVHHGNGT F
Sbjct: 192 GFALIRPPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFT 251
Query: 440 NDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQ 499
DP + ++S H+ GS+ K + ++G+GKGEG +N+ G D F++
Sbjct: 252 EDPDIFFLSTHQ--DGSYPGTGKIS---DIGKGKGEGTTLNLPL-PGGSGDIAMRTVFEE 305
Query: 500 VILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ----GRIILA 555
+I+P A +F P+++LVSAGYDA V DPL + + Y +K LA+ GR +
Sbjct: 306 IIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFF 365
Query: 556 LEGGYNISSISYAMTLCTKALLGD 579
LEGGYN+ S+S ++ +ALLG+
Sbjct: 366 LEGGYNLESLSSSVADSFRALLGE 389
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 135 ALSFADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVS 194
+ +F D + VD+ + S + + G A+IRPPGHHA P GFC+F NV+
Sbjct: 159 STTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIRPPGHHAVPKGPMGFCVFGNVA 218
Query: 195 VAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 254
+AA++A HGL R+ I+D+DVHHGNGT F DP + ++S H+ GS+ K +
Sbjct: 219 IAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLSTHQ--DGSYPGTGKIS-- 274
Query: 255 HNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILP 291
++G+GKGEG +N+ G D F+++I+P
Sbjct: 275 -DIGKGKGEGTTLNLPL-PGGSGDIAMRTVFEEIIVP 309
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 288 VILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAG 347
I +A HGL R+ I+D+DVHHGNGT F DP + ++S H+ GS+ K +
Sbjct: 218 AIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLSTHQ--DGSYPGTGKIS- 274
Query: 348 PHNVGEGKGEGFNVNV 363
++G+GKGEG +N+
Sbjct: 275 --DIGKGKGEGTTLNL 288
>sp|P72702|Y245_SYNY3 Uncharacterized protein slr0245 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0245 PE=3 SV=1
Length = 304
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 126/214 (58%), Gaps = 11/214 (5%)
Query: 364 AWNKVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLI 423
AW VD VLN A V + RPPGHHA ++ GFC+ NNV++AA YAL G+ RV I
Sbjct: 101 AWLDGVDHVLNQREAVFV-LARPPGHHAIRNTGMGFCLLNNVAIAAHYALTRPGVERVAI 159
Query: 424 LDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 483
LDWDVHHGNGT+A+ ++PR+ Y S+H++ +P + AG +G+ NV
Sbjct: 160 LDWDVHHGNGTEALVDHNPRIFYCSLHQF---PCYPGTGAAG------DRGQHDNVLNIP 210
Query: 484 NKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHW 543
K G Y AF+ +LP Q P+L+LVSAGYDA +DPL + PE Y TH+
Sbjct: 211 LKPGGDGKVYREAFEHKVLPFLRQVKPDLLLVSAGYDANHSDPLAYMNLIPEDYGMMTHY 270
Query: 544 LKALAQGRIILALEGGYNISSISYAMTLCTKALL 577
L ++ +L LEGGY++ S++ ++ K LL
Sbjct: 271 LMEISP-YPVLGLEGGYHLPSLAKSVVETLKPLL 303
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 80/135 (59%), Gaps = 10/135 (7%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
VD VLN A V + RPPGHHA ++ GFC+ NNV++AA YAL G+ RV ILDWDV
Sbjct: 106 VDHVLNQREAVFV-LARPPGHHAIRNTGMGFCLLNNVAIAAHYALTRPGVERVAILDWDV 164
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGT+A+ ++PR+ Y S+H++ +P + AG +G+ NV K G
Sbjct: 165 HHGNGTEALVDHNPRIFYCSLHQF---PCYPGTGAAG------DRGQHDNVLNIPLKPGG 215
Query: 277 SDPEYIAAFQQVILP 291
Y AF+ +LP
Sbjct: 216 DGKVYREAFEHKVLP 230
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRY 334
YAL G+ RV ILDWDVHHGNGT+A+ ++PR+ Y S+H++
Sbjct: 147 YALTRPGVERVAILDWDVHHGNGTEALVDHNPRIFYCSLHQF 188
>sp|O30107|Y130_ARCFU Uncharacterized protein AF_0130 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_0130 PE=3 SV=1
Length = 359
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 131/264 (49%), Gaps = 24/264 (9%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
+ +VLN E + A+IRPPGHHA+ GFC NN+++ K+ L G R+ ILDW
Sbjct: 103 RAAQAVLNKECENAFAMIRPPGHHAKPYIGAGFCYLNNMAIMVKWLL-KQGFERIAILDW 161
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
D HHG+GTQ +FYND RVL+IS H+ +P + P G GKGEG+ VN+
Sbjct: 162 DAHHGDGTQEIFYNDDRVLFISTHQM---PLYPGT--GYPEECGTGKGEGYTVNIPL-PP 215
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
G D Y+ ++I P+ +F P+ + +SAG D DP+ ++ YA A
Sbjct: 216 GTGDEGYMMVIDEIIEPVVNEFKPQFIAISAGQDNHFTDPITSLALTARGYAEMMRRAVA 275
Query: 547 LAQ----GRIILALEGGYNIS-SISYAMTLCTKALLGDPLPLLESDLDI--------NSS 593
+A+ GR++ LEGGY++ ++ Y A+ G L + + S
Sbjct: 276 MAEKHCDGRLVAVLEGGYSVEGALPYTNLGIIAAMAGFDLSAIREPENYLPELLWRKRDS 335
Query: 594 AVTSIKETISS----HKAYWSSLK 613
A+ +K I H YW K
Sbjct: 336 ALVKLKHNIEDVKRVHSKYWKCFK 359
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
+VLN E + A+IRPPGHHA+ GFC NN+++ K+ L G R+ ILDW
Sbjct: 103 RAAQAVLNKECENAFAMIRPPGHHAKPYIGAGFCYLNNMAIMVKWLL-KQGFERIAILDW 161
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
D HHG+GTQ +FYND RVL+IS H+ +P + P G GKGEG+ VN+
Sbjct: 162 DAHHGDGTQEIFYNDDRVLFISTHQM---PLYPGT--GYPEECGTGKGEGYTVNIPL-PP 215
Query: 275 GMSDPEYIAAFQQVILPM 292
G D Y+ ++I P+
Sbjct: 216 GTGDEGYMMVIDEIIEPV 233
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEG 354
L G R+ ILDWD HHG+GTQ +FYND RVL+IS H+ +P + P G G
Sbjct: 148 LLKQGFERIAILDWDAHHGDGTQEIFYNDDRVLFISTHQM---PLYPGT--GYPEECGTG 202
Query: 355 KGEGFNVNV 363
KGEG+ VN+
Sbjct: 203 KGEGYTVNI 211
>sp|Q70I53|HDAH_ALCSD Histone deacetylase-like amidohydrolase OS=Alcaligenes sp. (strain
DSM 11172) GN=hdaH PE=1 SV=3
Length = 369
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 113/199 (56%), Gaps = 9/199 (4%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++ V GE + G A++ PPGHHA + GFCIFNN SVAA YA G+ RV ILDW
Sbjct: 120 ELTRRVATGELSAGYALVNPPGHHAPHNAAMGFCIFNNTSVAAGYARAVLGMERVAILDW 179
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHGNGTQ +++NDP VL IS+H+ H F P S + G G G G+N+NV
Sbjct: 180 DVHHGNGTQDIWWNDPSVLTISLHQ--HLCFPPDSGYSTER--GAGNGHGYNINVPL-PP 234
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL-- 544
G + Y+ A QV+L + P+L++V +G+DA + DPL V+ + +
Sbjct: 235 GSGNAAYLHAMDQVVLHALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFRQMARRTID 294
Query: 545 --KALAQGRIILALEGGYN 561
+ GRI+ EGGY+
Sbjct: 295 CAADICDGRIVFVQEGGYS 313
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 88/155 (56%), Gaps = 12/155 (7%)
Query: 136 LSFADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSV 195
L A LS G V + V GE + G A++ PPGHHA + GFCIFNN SV
Sbjct: 108 LEIARLSAGGAV-------ELTRRVATGELSAGYALVNPPGHHAPHNAAMGFCIFNNTSV 160
Query: 196 AAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPH 255
AA YA G+ RV ILDWDVHHGNGTQ +++NDP VL IS+H+ H F P S +
Sbjct: 161 AAGYARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQ--HLCFPPDSGYSTER 218
Query: 256 NVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVIL 290
G G G G+N+NV G + Y+ A QV+L
Sbjct: 219 --GAGNGHGYNINVPL-PPGSGNAAYLHAMDQVVL 250
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 352
YA G+ RV ILDWDVHHGNGTQ +++NDP VL IS+H+ H F P S + G
Sbjct: 164 YARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQ--HLCFPPDSGYSTER--G 219
Query: 353 EGKGEGFNVNV 363
G G G+N+NV
Sbjct: 220 AGNGHGYNINV 230
>sp|O27262|Y1194_METTH Uncharacterized protein MTH_1194 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1194 PE=3 SV=1
Length = 331
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 5/195 (2%)
Query: 385 RPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRV 444
RPPGHHA D GFCIFNN+++A ++A N G+SR L+LD+DVHHGNGT ++FY D V
Sbjct: 113 RPPGHHATYDRSMGFCIFNNIAIAIEHARRNLGVSRPLVLDFDVHHGNGTSSIFYRDRDV 172
Query: 445 LYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPI 504
+YIS+H+ D + FP + G G+GEGFN+N+ +G + EY+ ++ +
Sbjct: 173 MYISIHQ-DPRTLFPGTGFI--DETGSGEGEGFNLNIPM-PRGSGNREYLWILGMILPAV 228
Query: 505 AYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISS 564
F P+++ VSAG+DA DPL V E ++ + W LEGGY+ +
Sbjct: 229 LEGFRPDMIFVSAGFDAHRRDPLAEIMVDEEFFS-WIGWFIHQTGLPCTAVLEGGYDPEA 287
Query: 565 ISYAMTLCTKALLGD 579
+ + + L G+
Sbjct: 288 LGRSNIAFMRGLDGE 302
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 4/110 (3%)
Query: 173 RPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRV 232
RPPGHHA D GFCIFNN+++A ++A N G+SR L+LD+DVHHGNGT ++FY D V
Sbjct: 113 RPPGHHATYDRSMGFCIFNNIAIAIEHARRNLGVSRPLVLDFDVHHGNGTSSIFYRDRDV 172
Query: 233 LYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYI 282
+YIS+H+ D + FP + G G+GEGFN+N+ +G + EY+
Sbjct: 173 MYISIHQ-DPRTLFPGTGFI--DETGSGEGEGFNLNIPM-PRGSGNREYL 218
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 352
+A N G+SR L+LD+DVHHGNGT ++FY D V+YIS+H+ D + FP + G
Sbjct: 139 HARRNLGVSRPLVLDFDVHHGNGTSSIFYRDRDVMYISIHQ-DPRTLFPGTGFI--DETG 195
Query: 353 EGKGEGFNVNV 363
G+GEGFN+N+
Sbjct: 196 SGEGEGFNLNI 206
>sp|Q54VQ7|HDA22_DICDI Type-2 histone deacetylase 2 OS=Dictyostelium discoideum GN=hdaC PE=2
SV=1
Length = 1704
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 18/228 (7%)
Query: 368 VVDSVLNGESAHGVAIIRPPGHHA-----EQDEPC-GFCIFNNVSVAAKYALDNHGLSRV 421
VDSV IRPPGHHA D P G+C+ NNV++ AKYA G SR+
Sbjct: 1191 AVDSVSRSGYTRAFCAIRPPGHHAGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRI 1250
Query: 422 LILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGS-FFPHS-KDAGPHNVGEGKGEGFNV 479
++D+DVHHGNGTQ + D L+IS+H D F+P + +D G + G+ +G +
Sbjct: 1251 AVVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDGNIL 1310
Query: 480 NVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAH 539
N+ K+ ++ + I+P + P+L+ +SAG+D +DP G K++ E Y
Sbjct: 1311 NIGL-KRNTGSAVFLQQWMNKIIPRLEAYKPQLIFLSAGFDGHKDDPTNGLKLNEEDYFV 1369
Query: 540 FTHWLKALA----QGRIILALEGGYNISSISYAMTLCT----KALLGD 579
T +K +A +GRII LEGGY I + ++ C KAL+ D
Sbjct: 1370 ITKMIKTVAFKYCKGRIISVLEGGYGIEKTN-SLQRCVNSHLKALIED 1416
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 139 ADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPGHHA-----EQDEPC-GFCIFNN 192
A L G VC VDSV IRPPGHHA D P G+C+ NN
Sbjct: 1180 AALRASGSVC------AAVDSVSRSGYTRAFCAIRPPGHHAGRYGRTSDAPSQGYCLINN 1233
Query: 193 VSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGS-FFPHS-K 250
V++ AKYA G SR+ ++D+DVHHGNGTQ + D L+IS+H D F+P + +
Sbjct: 1234 VAIGAKYASLTAGYSRIAVVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQ 1293
Query: 251 DAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILP 291
D G + G+ +G +N+ K+ ++ + I+P
Sbjct: 1294 DVGDIDEVSGQFDGNILNIGL-KRNTGSAVFLQQWMNKIIP 1333
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGS-FFPHS-KDAGPHN 350
YA G SR+ ++D+DVHHGNGTQ + D L+IS+H D F+P + +D G +
Sbjct: 1240 YASLTAGYSRIAVVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQDVGDID 1299
Query: 351 VGEGKGEGFNVNVAWNKVVDSVL 373
G+ +G +N+ + S +
Sbjct: 1300 EVSGQFDGNILNIGLKRNTGSAV 1322
>sp|Q94EJ2|HDA8_ARATH Histone deacetylase 8 OS=Arabidopsis thaliana GN=HDA8 PE=2 SV=1
Length = 377
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 131/241 (54%), Gaps = 11/241 (4%)
Query: 382 AIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYND 441
A++RPPGHH++ + G+C NN ++A K AL++ SRV ++D DVH+GNGT FY
Sbjct: 137 ALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTAEGFYTS 196
Query: 442 PRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQV 500
+VL +S+H +HGS+ H + +GE G G+N+NV G D Y A ++
Sbjct: 197 DKVLTVSLH-MNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPL-PNGTGDRGYEYAMNEL 254
Query: 501 ILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ----GRIILAL 556
++P +F P++V++ G D+ DP G ++ Y ++ +A+ GR+++
Sbjct: 255 VVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHGRLLMVQ 314
Query: 557 EGGYNISSISYAMTLCTKALLGDPLPLLESDL----DINSSAVTSIKETISSHKAYWSSL 612
EGGY+++ +Y + + +L P P L + + ++AV +++ + H + L
Sbjct: 315 EGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYYPEEEANAVAAVESIKTYHTEFVPFL 374
Query: 613 K 613
+
Sbjct: 375 R 375
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 8/162 (4%)
Query: 170 AIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYND 229
A++RPPGHH++ + G+C NN ++A K AL++ SRV ++D DVH+GNGT FY
Sbjct: 137 ALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTAEGFYTS 196
Query: 230 PRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQV 288
+VL +S+H +HGS+ H + +GE G G+N+NV G D Y A ++
Sbjct: 197 DKVLTVSLH-MNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPL-PNGTGDRGYEYAMNEL 254
Query: 289 ILPMYALDNHGLSRVLIL---DWDVHHGNGTQAMFYNDPRVL 327
++P A+ G V+++ D NG Q++ N R +
Sbjct: 255 VVP--AVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRI 294
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 294 ALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVG 352
AL++ SRV ++D DVH+GNGT FY +VL +S+H +HGS+ H + +G
Sbjct: 167 ALNSGSCSRVAVIDIDVHYGNGTAEGFYTSDKVLTVSLH-MNHGSWGSSHPQKGSIDELG 225
Query: 353 EGKGEGFNVNV 363
E G G+N+NV
Sbjct: 226 EDVGLGYNLNV 236
>sp|Q57955|Y535_METJA Uncharacterized protein MJ0535 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0535 PE=3 SV=1
Length = 343
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 128/232 (55%), Gaps = 22/232 (9%)
Query: 382 AIIRPPGHHAEQDEPC------GFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQ 435
A+ RPPGHHA GFCIFNN++ AA+ A + + +V+I+D+DVHHGNGTQ
Sbjct: 116 ALTRPPGHHAGISGRALGAMSNGFCIFNNIAGAARLA--KNYMKKVIIIDFDVHHGNGTQ 173
Query: 436 AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIA 495
+F+ND RV++I H+ +P + D ++G + +G +N+ + +D +YI
Sbjct: 174 EIFWNDNRVIHIDFHQR---GIYPGTGDI--LDIGGEEAKGTKINLPFPAHS-TDADYIF 227
Query: 496 AFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILA 555
A+ +++ PI F+P+ VLVSAG+DA +ND L ++ F ++ A G + A
Sbjct: 228 AWNEIVEPILNYFSPDTVLVSAGFDAFINDGLASMDLTET----FYRFVGAKLSGYSVTA 283
Query: 556 -LEGGYNISSISYAMTLCTKALL--GDPLPLLESDLDINSSAVTSIKETISS 604
LEGGY+I + YA + D L LE INS+ V S+ + +
Sbjct: 284 VLEGGYSI-GLKYAPPAFLDGYVDAKDVLDNLEDYTVINSNEVKSMVKNVKK 334
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 78/129 (60%), Gaps = 14/129 (10%)
Query: 170 AIIRPPGHHAEQDEPC------GFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQ 223
A+ RPPGHHA GFCIFNN++ AA+ A + + +V+I+D+DVHHGNGTQ
Sbjct: 116 ALTRPPGHHAGISGRALGAMSNGFCIFNNIAGAARLA--KNYMKKVIIIDFDVHHGNGTQ 173
Query: 224 AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIA 283
+F+ND RV++I H+ +P + D ++G + +G +N+ + +D +YI
Sbjct: 174 EIFWNDNRVIHIDFHQR---GIYPGTGDI--LDIGGEEAKGTKINLPFPAHS-TDADYIF 227
Query: 284 AFQQVILPM 292
A+ +++ P+
Sbjct: 228 AWNEIVEPI 236
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 18/88 (20%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +V+I+D+DVHHGNGTQ +F+ND RV++I H+ +P + D ++G + +G
Sbjct: 156 MKKVIIIDFDVHHGNGTQEIFWNDNRVIHIDFHQR---GIYPGTGDI--LDIGGEEAKGT 210
Query: 360 NVNV-------------AWNKVVDSVLN 374
+N+ AWN++V+ +LN
Sbjct: 211 KINLPFPAHSTDADYIFAWNEIVEPILN 238
>sp|Q09440|HDA2_CAEEL Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2
PE=3 SV=1
Length = 507
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 383 IIRPPG--HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYN 440
+I PG HHA++ E GFC N++ + L H RVL +D D+HHG+G Q F N
Sbjct: 153 VINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYH--KRVLYIDIDIHHGDGVQEAFNN 210
Query: 441 DPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQV 500
RV+ +S HR+ G +FP S VG GK NV + + D Y+ F+ V
Sbjct: 211 SDRVMTVSFHRF--GQYFPGSGSIMDKGVGPGKYFAINVPLM---AAIRDEPYLKLFESV 265
Query: 501 ILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGY 560
I + FNPE +++ G D+ D LG +S A+A ++K+L + ++L GGY
Sbjct: 266 ISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMVLG-GGGY 324
Query: 561 NISSISYAMTLCTKALLG 578
+ +++ L T +LG
Sbjct: 325 TLRNVARCWALETGVILG 342
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 143 VWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYAL 201
+W Y C Y V + + + I P G HHA++ E GFC N++ + L
Sbjct: 127 LWDY-CTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELL 185
Query: 202 DNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGK 261
H RVL +D D+HHG+G Q F N RV+ +S HR+ G +FP S VG GK
Sbjct: 186 KYH--KRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRF--GQYFPGSGSIMDKGVGPGK 241
Query: 262 GEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
NV + + D Y+ F+ VI
Sbjct: 242 YFAINVPLM---AAIRDEPYLKLFESVI 266
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
RVL +D D+HHG+G Q F N RV+ +S HR+ G +FP S VG GK N
Sbjct: 189 KRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRF--GQYFPGSGSIMDKGVGPGKYFAIN 246
Query: 361 V-------NVAWNKVVDSVLNG--ESAHGVAIIRPPGHHAEQDEPCG-FCI-FNNVSVAA 409
V + + K+ +SV++G E+ + AI+ G + ++ G F + FN + A
Sbjct: 247 VPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAV 306
Query: 410 KY 411
KY
Sbjct: 307 KY 308
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 20/296 (6%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE 353
L N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 42 LLNYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGE 98
Query: 354 ------GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVS 406
G E F A V +V + +A+ G HHA++ E GFC N++
Sbjct: 99 DCPVFDGLFE-FCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIV 157
Query: 407 VAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 466
+A L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D
Sbjct: 158 LAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL-- 211
Query: 467 HNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP 526
++G GKG+ + VN + G+ D Y A F+ VI + F P V++ G D+ D
Sbjct: 212 RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDR 270
Query: 527 LGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
LG ++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 271 LGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ VI
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVI 245
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE 353
L N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 42 LLNYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGE 98
Query: 354 ------GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVS 406
G E ++ + V +V + +A+ G HHA++ E GFC N++
Sbjct: 99 DCPVFDGLFEFCQLSTGGS-VASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIV 157
Query: 407 VAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 466
+A L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D
Sbjct: 158 LAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL-- 211
Query: 467 HNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP 526
++G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D
Sbjct: 212 RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR 270
Query: 527 LGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
LG ++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 271 LGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE 353
L N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 42 LLNYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGE 98
Query: 354 ------GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVS 406
G E ++ + V +V + +A+ G HHA++ E GFC N++
Sbjct: 99 DCPVFDGLFEFCQLSTGGS-VASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIV 157
Query: 407 VAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 466
+A L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D
Sbjct: 158 LAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL-- 211
Query: 467 HNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP 526
++G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D
Sbjct: 212 RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR 270
Query: 527 LGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
LG ++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 271 LGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE 353
L N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 42 LLNYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGE 98
Query: 354 ------GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVS 406
G E ++ + V +V + +A+ G HHA++ E GFC N++
Sbjct: 99 DCPVFDGLFEFCQLSTGGS-VASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIV 157
Query: 407 VAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 466
+A L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D
Sbjct: 158 LAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL-- 211
Query: 467 HNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP 526
++G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D
Sbjct: 212 RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR 270
Query: 527 LGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
LG ++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 271 LGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1
Length = 482
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE 353
L N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 42 LLNYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGE 98
Query: 354 ------GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVS 406
G E ++ + V +V + +A+ G HHA++ E GFC N++
Sbjct: 99 DCPVFDGLFEFCQLSTGGS-VASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIV 157
Query: 407 VAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 466
+A L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D
Sbjct: 158 LAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL-- 211
Query: 467 HNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP 526
++G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D
Sbjct: 212 RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR 270
Query: 527 LGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
LG ++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 271 LGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE 353
L N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 42 LLNYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGE 98
Query: 354 ------GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVS 406
G E ++ + V +V + +A+ G HHA++ E GFC N++
Sbjct: 99 DCPVFDGLFEFCQLSTGGS-VASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIV 157
Query: 407 VAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 466
+A L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D
Sbjct: 158 LAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL-- 211
Query: 467 HNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP 526
++G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D
Sbjct: 212 RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR 270
Query: 527 LGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
LG ++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 271 LGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 14/196 (7%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++++AA L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 137 HHAKKREASGFCYVNDIALAALELLKYH--QRVLYIDIDVHHGDGVEEFFYTTDRVMTCS 194
Query: 449 VHRYDHGSFFP---HSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIA 505
H++ G +FP H KD G +G GK NV + + G+ D Y + F+ VI I
Sbjct: 195 FHKF--GEYFPGTGHIKDTG---IGTGKNYAVNVPL---RDGIDDESYESVFKPVISHIM 246
Query: 506 YQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSI 565
F PE V++ G D+ D LG +S + ++ ++K+ I + GGY + ++
Sbjct: 247 QWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVG-GGGYTVRNV 305
Query: 566 SYAMTLCTKALLGDPL 581
+ T T L G+ L
Sbjct: 306 ARVWTYETGLLAGEEL 321
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 13/116 (11%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++++AA L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 137 HHAKKREASGFCYVNDIALAALELLKYH--QRVLYIDIDVHHGDGVEEFFYTTDRVMTCS 194
Query: 237 VHRYDHGSFFP---HSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H++ G +FP H KD G +G GK NV + + G+ D Y + F+ VI
Sbjct: 195 FHKF--GEYFPGTGHIKDTG---IGTGKNYAVNVPL---RDGIDDESYESVFKPVI 242
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP---HSKDAGPHNVGEGKGE 357
RVL +D DVHHG+G + FY RV+ S H++ G +FP H KD G G G+
Sbjct: 165 QRVLYIDIDVHHGDGVEEFFYTTDRVMTCSFHKF--GEYFPGTGHIKDTGI-----GTGK 217
Query: 358 GFNVNVAWNKVVD-----SVLNGESAHGVAIIRP 386
+ VNV +D SV +H + RP
Sbjct: 218 NYAVNVPLRDGIDDESYESVFKPVISHIMQWFRP 251
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-b PE=1
SV=1
Length = 480
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ +A L H RV+ +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVVYIDIDIHHGDGVEEAFYTTDRVMSVS 197
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+ + F
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMTKVMEMF 252
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P V++ G D+ D LG ++ + +A ++K ++L GGY I +++
Sbjct: 253 QPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPMLMLG-GGGYTIRNVARC 311
Query: 569 MTLCTKALLGDPLP 582
T T L +P
Sbjct: 312 WTYETAVALDSEIP 325
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RV+ +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVVYIDIDIHHGDGVEEAFYTTDRVMSVS 197
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYAL 295
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+ + +
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMTKVMEM 251
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
RV+ +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVVYIDIDIHHGDGVEEAFYTTDRVMSVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 361 VNVAWNKVVD 370
VN +D
Sbjct: 224 VNYPLRDGID 233
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA
PE=2 SV=1
Length = 495
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ ++ L +H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 135 HHAKKSEASGFCYTNDIVLSILELLKHH--ERVLYIDIDIHHGDGVEEAFYTTDRVMTVS 192
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G +FP + D ++G KG+ +++N K G+ D Y + F+ +I + +
Sbjct: 193 FHKY--GDYFPGTGDV--KDIGADKGKYYSLNFPL-KDGIDDESYQSIFRPIIRSVMDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSI--- 565
P V++ G D+ D LG ++ +A +LK+ ++L GGY I ++
Sbjct: 248 RPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNVPLVVLG-GGGYTIKNVARC 306
Query: 566 -SYAMTLCTKALLGDPLP 582
+Y ++ + L D LP
Sbjct: 307 WTYETSILVDSELKDELP 324
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ ++ L +H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 135 HHAKKSEASGFCYTNDIVLSILELLKHH--ERVLYIDIDIHHGDGVEEAFYTTDRVMTVS 192
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G KG+ +++N K G+ D Y + F+ +I
Sbjct: 193 FHKY--GDYFPGTGDV--KDIGADKGKYYSLNFPL-KDGIDDESYQSIFRPII 240
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 288 VILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAG 347
++L + L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D
Sbjct: 151 IVLSILELLKHH-ERVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GDYFPGTGDV- 206
Query: 348 PHNVGEGKGEGFNVNVAWNKVVD 370
++G KG+ +++N +D
Sbjct: 207 -KDIGADKGKYYSLNFPLKDGID 228
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 11/198 (5%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA+++ P GFC N++ ++ L H R+L +D D+HHG+G Q FY RV +S
Sbjct: 158 HHAKKNSPSGFCYVNDIVLSILNLLRYH--PRILYIDIDLHHGDGVQEAFYTTDRVFTLS 215
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y+ G FFP + D +G KG+ F +NV + G+ D YI F+ ++ P+ F
Sbjct: 216 FHKYN-GEFFPGTGDLT--EIGCDKGKHFALNVPL-EDGIDDDSYINLFKSIVDPLIMTF 271
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGY---NISSI 565
P L++ G D+ +D LG ++ +A+ ++K+ +++ GGY N+S +
Sbjct: 272 KPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVG-GGGYTPRNVSRL 330
Query: 566 -SYAMTLCTKALLGDPLP 582
+Y + LL + +P
Sbjct: 331 WTYETGILNDVLLPEDIP 348
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA+++ P GFC N++ ++ L H R+L +D D+HHG+G Q FY RV +S
Sbjct: 158 HHAKKNSPSGFCYVNDIVLSILNLLRYH--PRILYIDIDLHHGDGVQEAFYTTDRVFTLS 215
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPM 292
H+Y+ G FFP + D +G KG+ F +NV + G+ D YI F+ ++ P+
Sbjct: 216 FHKYN-GEFFPGTGDLT--EIGCDKGKHFALNVPL-EDGIDDDSYINLFKSIVDPL 267
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R+L +D D+HHG+G Q FY RV +S H+Y+ G FFP + D +G KG+ F +
Sbjct: 187 RILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYN-GEFFPGTGDLT--EIGCDKGKHFAL 243
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 244 NVPLEDGID 252
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA +DE GFC N++ +A L H +RVL +D DVHHG+G Q FY RV+ +S
Sbjct: 143 HHARKDEASGFCYVNDIVLAILELLKFH--ARVLYIDIDVHHGDGVQEAFYLTDRVMTVS 200
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H++ G FFP + D +G G+ ++VNV G+ D Y+ F+ VI + +
Sbjct: 201 FHKFG-GDFFPGTGDID--EIGAKTGKLYSVNVPL-ADGIDDKNYLNIFKPVIQGVMDYY 256
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSI--- 565
P ++++ G D+ D LG ++ + +A ++K+ ++L GGY + ++
Sbjct: 257 RPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKSFNIPTLVLG-GGGYTVRNVARC 315
Query: 566 -SYAMTLCTKALLGDPLP 582
+Y ++C + + LP
Sbjct: 316 WTYETSVCVDTEVNNELP 333
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA +DE GFC N++ +A L H +RVL +D DVHHG+G Q FY RV+ +S
Sbjct: 143 HHARKDEASGFCYVNDIVLAILELLKFH--ARVLYIDIDVHHGDGVQEAFYLTDRVMTVS 200
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H++ G FFP + D +G G+ ++VNV G+ D Y+ F+ VI
Sbjct: 201 FHKFG-GDFFPGTGDID--EIGAKTGKLYSVNVPL-ADGIDDKNYLNIFKPVI 249
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
+RVL +D DVHHG+G Q FY RV+ +S H++ G FFP + D +G G+ ++
Sbjct: 171 ARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFG-GDFFPGTGDID--EIGAKTGKLYS 227
Query: 361 VNVAWNKVVDS 371
VNV +D
Sbjct: 228 VNVPLADGIDD 238
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 11/204 (5%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 150 HHAKKSEASGFCYLNDIVLGIIELLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCS 207
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G FFP + + ++G G G+ + VNV + G+ D Y + F+ VI I +
Sbjct: 208 FHKY--GEFFPGTGEL--RDIGVGAGKNYAVNVPL-RDGIDDATYRSVFEPVIKKIMEWY 262
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P V++ G D+ D LG +S E +A+ +++K+ +++ GGY + ++ A
Sbjct: 263 QPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVG-GGGYTMRNV--A 319
Query: 569 MTLCTKALLGDPLPLLESDLDINS 592
T C + L + + +L+ DL N
Sbjct: 320 RTWCFETGLLNNV-VLDKDLPYNE 342
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 150 HHAKKSEASGFCYLNDIVLGIIELLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCS 207
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G FFP + + ++G G G+ + VNV + G+ D Y + F+ VI
Sbjct: 208 FHKY--GEFFPGTGEL--RDIGVGAGKNYAVNVPL-RDGIDDATYRSVFEPVI 255
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D DVHHG+G + FY RV+ S H+Y G FFP + + ++G G G+ + V
Sbjct: 179 RVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKY--GEFFPGTGEL--RDIGVGAGKNYAV 234
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 235 NVPLRDGID 243
>sp|Q3JUN4|APHA_BURP1 Acetylpolyamine aminohydrolase OS=Burkholderia pseudomallei (strain
1710b) GN=aphA PE=1 SV=1
Length = 341
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 382 AIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYND 441
A+ RPPGHHA D GFC NN ++AA+ H +RV +LD D+HHG G Q +FY
Sbjct: 149 ALCRPPGHHARVDAAGGFCYLNNAAIAAQALRARH--ARVAVLDTDMHHGQGIQEIFYAR 206
Query: 442 PRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 501
VLY+S+H D +F+P + G G+G G+NVN+ G S+ + +
Sbjct: 207 RDVLYVSIH-GDPTNFYP-AVAGFDDERGAGEGLGYNVNLPM-PHGSSEAAFFERVDDAL 263
Query: 502 LPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYN 561
+ +F P+ +++S G+D +DP V+ + + H + AL +I+ EGGY+
Sbjct: 264 REL-RRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIGALRLPTVIVQ-EGGYH 321
Query: 562 ISSIS 566
I S+
Sbjct: 322 IESLE 326
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 170 AIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYND 229
A+ RPPGHHA D GFC NN ++AA+ H +RV +LD D+HHG G Q +FY
Sbjct: 149 ALCRPPGHHARVDAAGGFCYLNNAAIAAQALRARH--ARVAVLDTDMHHGQGIQEIFYAR 206
Query: 230 PRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 269
VLY+S+H D +F+P + G G+G G+NVN+
Sbjct: 207 RDVLYVSIH-GDPTNFYP-AVAGFDDERGAGEGLGYNVNL 244
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
+RV +LD D+HHG G Q +FY VLY+S+H D +F+P + G G+G G+N
Sbjct: 184 ARVAVLDTDMHHGQGIQEIFYARRDVLYVSIH-GDPTNFYP-AVAGFDDERGAGEGLGYN 241
Query: 361 VNV 363
VN+
Sbjct: 242 VNL 244
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ +S
Sbjct: 138 HHAKKSEASGFCYVNDIVLGILELLKYH--QRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 195
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G +FP + D ++G GKG+ + VN+ + GM D Y + F +I + F
Sbjct: 196 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNIPL-RDGMDDDAYESIFVPIISKVMETF 250
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P V++ G D+ D LG ++ + + ++K +++ GGY I ++S
Sbjct: 251 QPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVG-GGGYTIRNVSRC 309
Query: 569 MTLCTKALL 577
T T L
Sbjct: 310 WTYETSVAL 318
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ +S
Sbjct: 138 HHAKKSEASGFCYVNDIVLGILELLKYH--QRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 195
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN+ + GM D Y + F +I
Sbjct: 196 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNIPL-RDGMDDDAYESIFVPII 243
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
RVL +D DVHHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 166 QRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 221
Query: 361 VNVAWNKVVD 370
VN+ +D
Sbjct: 222 VNIPLRDGMD 231
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-a PE=1
SV=1
Length = 480
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ +A L H RV+ +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVVYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G +FP + D ++G GKG+ + VN A + G+ D Y A F+ V+ + F
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYAL-RDGIDDESYEAIFKPVMSKVMEMF 252
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P V++ G D+ D LG ++ + +A ++K +++ GGY I +++
Sbjct: 253 QPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTF-NLPLLMLGGGGYTIRNVARC 311
Query: 569 MTLCTKALLGDPLP 582
T T L +P
Sbjct: 312 WTYETAVALDSEIP 325
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RV+ +D D+HHG+G + FY RV+ +S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVVYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN A + G+ D Y A F+ V+
Sbjct: 198 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYAL-RDGIDDESYEAIFKPVM 245
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
RV+ +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVVYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 361 VNVAWNKVVD 370
VN A +D
Sbjct: 224 VNYALRDGID 233
>sp|Q9BY41|HDAC8_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2
Length = 377
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 7/193 (3%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ + R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLNDAVLGILRL--RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ + F
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESVLKEVYQAF 255
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
NP+ V++ G D DP+ ++P ++ +IL GGYN+++ +
Sbjct: 256 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNLANTARC 314
Query: 569 MTLCTKALLGDPL 581
T T +LG L
Sbjct: 315 WTYLTGVILGKTL 327
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ + R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLNDAVLGILRL--RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ +Y
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESVLKEVYQAF 255
Query: 297 N 297
N
Sbjct: 256 N 256
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
R+L +D D+HHG+G + F +V+ +S+H++ G FFP + D +VG GKG +
Sbjct: 169 FERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVS--DVGLGKGRYY 225
Query: 360 NVNV 363
+VNV
Sbjct: 226 SVNV 229
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ +A L RVL +D D+HHG+G Q FY RVL +S
Sbjct: 157 HHAKRGEASGFCYVNDIVLAILNML--RFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVS 214
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y+ G FFP + + + V GK NV + + G+ D +Y + F+ +I P F
Sbjct: 215 FHKYN-GDFFPATGNFDENGVKGGKYFALNVPL---EDGIGDEQYTSLFKSIIEPTINTF 270
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S A+ + ++ +++ GGY + +++
Sbjct: 271 QPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVG-GGGYTLRNVARA 329
Query: 567 --YAMTLCTKALLGDPLP 582
Y ++C + LP
Sbjct: 330 WCYETSICVNEQIPSELP 347
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L RVL +D D+HHG+G Q FY RVL +S
Sbjct: 157 HHAKRGEASGFCYVNDIVLAILNML--RFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVS 214
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
H+Y+ G FFP + + + V GK NV + + G+ D +Y + F+ +I P
Sbjct: 215 FHKYN-GDFFPATGNFDENGVKGGKYFALNVPL---EDGIGDEQYTSLFKSIIEPTI--- 267
Query: 297 NHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKG 356
N ++L G ++ Y+ V +S+H + F S + VG G
Sbjct: 268 NTFQPSAIVLQC------GADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGY 321
Query: 357 EGFNVNVAW 365
NV AW
Sbjct: 322 TLRNVARAW 330
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 262,299,120
Number of Sequences: 539616
Number of extensions: 11849304
Number of successful extensions: 21093
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 20359
Number of HSP's gapped (non-prelim): 402
length of query: 632
length of database: 191,569,459
effective HSP length: 124
effective length of query: 508
effective length of database: 124,657,075
effective search space: 63325794100
effective search space used: 63325794100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)