Your job contains 1 sequence.
>psy8282
MPFALNLCYFVIKGNFSLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN
HLLALLIYLYGVMYVNPMSIIITEHPLALSFADLSVWCYVCEAYVDNHLLALLIYLYGVM
YVKPMSIIITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPGHHAE
QDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRY
DHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGL
SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN
VNVAWNKVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSR
VLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVN
VAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHF
THWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKE
TISSHKAYWSSLKFLVALPENKLLSADYAQLA
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8282
(632 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 852 2.3e-129 2
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 817 2.8e-123 2
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 817 3.6e-123 2
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 800 7.5e-122 2
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"... 796 1.2e-121 2
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"... 799 1.4e-121 2
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 775 2.1e-119 2
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 750 1.5e-118 2
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 765 2.8e-118 2
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 647 6.4e-102 2
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 647 6.7e-102 2
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 647 6.7e-102 2
UNIPROTKB|H9KZJ3 - symbol:HDAC10 "Uncharacterized protein... 693 2.7e-68 1
UNIPROTKB|E2RSA8 - symbol:HDAC10 "Uncharacterized protein... 691 4.4e-68 1
ZFIN|ZDB-GENE-030131-5464 - symbol:hdac10 "histone deacet... 678 1.1e-66 1
UNIPROTKB|Q0VD49 - symbol:HDAC10 "Uncharacterized protein... 674 2.8e-66 1
UNIPROTKB|I3LDD6 - symbol:LOC100518786 "Uncharacterized p... 673 3.6e-66 1
UNIPROTKB|F1RXT2 - symbol:LOC100518786 "Uncharacterized p... 673 3.6e-66 1
UNIPROTKB|E2RS82 - symbol:HDAC10 "Uncharacterized protein... 672 4.5e-66 1
MGI|MGI:2158340 - symbol:Hdac10 "histone deacetylase 10" ... 672 4.5e-66 1
UNIPROTKB|Q969S8 - symbol:HDAC10 "Histone deacetylase 10"... 659 1.1e-64 1
ASPGD|ASPL0000014944 - symbol:hdaA species:162425 "Emeric... 652 6.0e-64 1
UNIPROTKB|G4NCI1 - symbol:MGG_01076 "Histone deacetylase ... 651 7.6e-64 1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 642 6.9e-63 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 642 6.9e-63 1
TAIR|locus:2159461 - symbol:HDA18 "AT5G61070" species:370... 637 2.3e-62 1
RGD|1310748 - symbol:Hdac9 "histone deacetylase 9" specie... 637 2.3e-62 1
UNIPROTKB|F6X8E7 - symbol:HDAC9 "Uncharacterized protein"... 637 1.4e-61 1
UNIPROTKB|F1MYR0 - symbol:HDAC4 "Uncharacterized protein"... 634 3.2e-61 1
UNIPROTKB|F1NES1 - symbol:HDAC4 "Histone deacetylase 4" s... 630 7.7e-61 1
UNIPROTKB|F1NP26 - symbol:HDAC4 "Histone deacetylase 4" s... 630 8.0e-61 1
UNIPROTKB|F1NWX8 - symbol:HDAC4 "Histone deacetylase 4" s... 630 8.3e-61 1
UNIPROTKB|P83038 - symbol:HDAC4 "Histone deacetylase 4" s... 630 8.7e-61 1
MGI|MGI:3036234 - symbol:Hdac4 "histone deacetylase 4" sp... 628 1.4e-60 1
UNIPROTKB|F5GX36 - symbol:HDAC4 "Histone deacetylase 4" s... 620 1.5e-60 1
UNIPROTKB|E1C7C0 - symbol:HDAC9 "Uncharacterized protein"... 625 2.9e-60 1
RGD|619979 - symbol:Hdac4 "histone deacetylase 4" species... 625 3.0e-60 1
UNIPROTKB|P56524 - symbol:HDAC4 "Histone deacetylase 4" s... 620 1.1e-59 1
UNIPROTKB|F1LSN5 - symbol:F1LSN5 "Uncharacterized protein... 614 1.9e-59 1
POMBASE|SPBC800.03 - symbol:clr3 "histone deacetylase (cl... 609 2.2e-59 1
ZFIN|ZDB-GENE-061013-95 - symbol:hdac4 "histone deacetyla... 614 3.6e-59 1
MGI|MGI:1891835 - symbol:Hdac7 "histone deacetylase 7" sp... 611 4.3e-59 1
SGD|S000004966 - symbol:HDA1 "Putative catalytic subunit ... 606 4.5e-59 1
UNIPROTKB|Q9UKV0 - symbol:HDAC9 "Histone deacetylase 9" s... 611 7.2e-59 1
FB|FBgn0041210 - symbol:HDAC4 "HDAC4" species:7227 "Droso... 596 7.4e-59 2
UNIPROTKB|I3LM52 - symbol:HDAC4 "Uncharacterized protein"... 611 8.8e-59 1
UNIPROTKB|F1PK81 - symbol:HDAC7 "Uncharacterized protein"... 608 1.0e-58 1
UNIPROTKB|F1S1J4 - symbol:HDAC5 "Uncharacterized protein"... 601 1.5e-58 1
UNIPROTKB|Q9UQL6 - symbol:HDAC5 "Histone deacetylase 5" s... 608 2.5e-58 1
UNIPROTKB|F1LQG9 - symbol:Hdac5 "Protein Hdac5" species:1... 598 3.2e-58 1
UNIPROTKB|F1PRU6 - symbol:HDAC4 "Uncharacterized protein"... 606 3.5e-58 1
UNIPROTKB|F1N616 - symbol:HDAC7 "Uncharacterized protein"... 604 3.7e-58 1
UNIPROTKB|Q5R902 - symbol:HDAC5 "Histone deacetylase 5" s... 605 5.2e-58 1
UNIPROTKB|Q8WUI4 - symbol:HDAC7 "Histone deacetylase 7" s... 601 6.2e-58 1
UNIPROTKB|F1LM64 - symbol:Hdac5 "Protein Hdac5" species:1... 598 9.2e-58 1
UNIPROTKB|F1LSL9 - symbol:Hdac5 "Protein Hdac5" species:1... 598 9.2e-58 1
UNIPROTKB|F1MNA5 - symbol:HDAC5 "Uncharacterized protein"... 601 1.4e-57 1
UNIPROTKB|J9P9N5 - symbol:HDAC5 "Uncharacterized protein"... 600 1.6e-57 1
MGI|MGI:1333784 - symbol:Hdac5 "histone deacetylase 5" sp... 600 1.7e-57 1
UNIPROTKB|F1P6I3 - symbol:HDAC5 "Uncharacterized protein"... 600 1.8e-57 1
UNIPROTKB|Q80ZH1 - symbol:HDAC5 "Histone deacetylase 5" s... 598 2.8e-57 1
UNIPROTKB|H9KZE7 - symbol:H9KZE7 "Uncharacterized protein... 585 3.6e-56 1
RGD|1305874 - symbol:Hdac10 "histone deacetylase 10" spec... 578 4.2e-56 1
UNIPROTKB|J3KPH8 - symbol:HDAC7 "Histone deacetylase 7" s... 571 1.6e-54 1
UNIPROTKB|I3L961 - symbol:I3L961 "Uncharacterized protein... 556 8.9e-54 1
UNIPROTKB|I3LKB5 - symbol:I3LKB5 "Uncharacterized protein... 556 8.9e-54 1
WB|WBGene00001837 - symbol:hda-4 species:6239 "Caenorhabd... 560 1.1e-53 1
TAIR|locus:2095087 - symbol:HDA15 "AT3G18520" species:370... 539 5.6e-52 1
UNIPROTKB|C9J8B8 - symbol:HDAC10 "Histone deacetylase 10"... 427 6.0e-46 2
UNIPROTKB|H0YH91 - symbol:HDAC7 "Histone deacetylase 7" s... 462 8.1e-44 1
UNIPROTKB|E7EUZ1 - symbol:HDAC6 "Histone deacetylase 6" s... 433 1.3e-40 1
TAIR|locus:2119201 - symbol:HDA14 "AT4G33470" species:370... 425 1.1e-39 1
WB|WBGene00001838 - symbol:hda-10 species:6239 "Caenorhab... 417 9.5e-39 1
UNIPROTKB|Q3Z9M2 - symbol:DET0330 "Histone deacetylase fa... 391 2.2e-38 2
TIGR_CMR|DET_0330 - symbol:DET_0330 "histone deacetylase ... 391 2.2e-38 2
UNIPROTKB|Q604Q2 - symbol:MCA2486 "Histone deacetylase/Ac... 403 3.7e-37 1
UNIPROTKB|Q4KBB7 - symbol:PFL_3361 "Histone deacetylase f... 394 3.8e-36 1
UNIPROTKB|Q5LQF5 - symbol:SPO2535 "Histone deacetylase/Ac... 386 3.0e-35 1
TIGR_CMR|SPO_2535 - symbol:SPO_2535 "histone deacetylase/... 386 3.0e-35 1
TIGR_CMR|SPO_0250 - symbol:SPO_0250 "histone deacetylase ... 377 3.0e-34 1
UNIPROTKB|F1SEI2 - symbol:HDAC9 "Uncharacterized protein"... 376 3.9e-34 1
UNIPROTKB|F1MWS5 - symbol:HDAC9 "Uncharacterized protein"... 395 1.1e-33 1
TIGR_CMR|SPO_A0096 - symbol:SPO_A0096 "histone deacetylas... 364 8.2e-33 1
TIGR_CMR|SPO_3195 - symbol:SPO_3195 "histone deacetylase ... 349 3.6e-31 1
TAIR|locus:2201826 - symbol:HDA08 "AT1G08460" species:370... 343 1.7e-30 1
UNIPROTKB|Q484X2 - symbol:CPS_1655 "Histone deacetylase f... 332 2.6e-29 1
TIGR_CMR|CPS_1655 - symbol:CPS_1655 "histone deacetylase ... 332 2.6e-29 1
UNIPROTKB|E1BQQ2 - symbol:Gga.27678 "Uncharacterized prot... 324 2.0e-28 1
TIGR_CMR|CHY_0263 - symbol:CHY_0263 "histone deacetylase ... 321 4.2e-28 1
DICTYBASE|DDB_G0280195 - symbol:hdaC "type-2 histone deac... 343 4.6e-26 2
UNIPROTKB|Q4K950 - symbol:aphA_2 "Acetylpolyamine aminohy... 302 4.9e-26 1
UNIPROTKB|Q4K3I0 - symbol:aphA_3 "Acetylpolyamine aminohy... 290 9.8e-25 1
TIGR_CMR|SPO_2002 - symbol:SPO_2002 "acetylpolyamine amin... 290 9.8e-25 1
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s... 295 2.3e-23 1
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla... 291 6.5e-23 1
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s... 291 6.6e-23 1
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s... 291 6.6e-23 1
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe... 291 6.6e-23 1
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s... 291 6.6e-23 1
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe... 288 1.5e-22 1
WARNING: Descriptions of 140 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 852 (305.0 bits), Expect = 2.3e-129, Sum P(2) = 2.3e-129
Identities = 156/257 (60%), Positives = 195/257 (75%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
+ VDSVL GES G+ +RPPGHHAEQD P GFCIFNNV++AA+YA+ + GL RVLI+DW
Sbjct: 651 QAVDSVLRGESRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDW 710
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHGNGTQ +F ++P+VLYIS+HRY+HGSFFP D VG+G G GFNVN+ WNKK
Sbjct: 711 DVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKK 770
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM D EY AFQQ+I+PIAY+FNP+LVLVSAG+DA + DPLGGCKV+ E Y THWL A
Sbjct: 771 GMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSA 830
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPL-------LESDLDIN-SSAVTSI 598
LA GRII+ LEGGYN++SISYAMT+CTK LLGDP+P L+ + S V S+
Sbjct: 831 LASGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESL 890
Query: 599 KETISSHKAYWSSLKFL 615
++ + + +W SL+F+
Sbjct: 891 QQCLQVQRNHWRSLEFV 907
Score = 638 (229.6 bits), Expect = 1.5e-61, P = 1.5e-61
Identities = 114/248 (45%), Positives = 170/248 (68%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD ++ G++ +G+AIIRPPGHHA + E G+C FNNV++A ++ALD H L R+LI+D+
Sbjct: 224 ELVDHLVAGKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRILIIDY 283
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ FYNDPRV+Y S+HR++HGSF+PH ++ H +G G G G+N NV N
Sbjct: 284 DVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNAT 343
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM++ +Y+A FQQ++LP+A +F PEL++VSAGYDA + P G +V+P Y H + L
Sbjct: 344 GMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLR 403
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDI-NSSAVTSIKETISSH 605
LA R+ + LEGGY + S++ L ++LLGDP P L + + + ++ I+ H
Sbjct: 404 LADARVAVVLEGGYCLDSLAEGAALTLRSLLGDPCPPLVETVPLPRAELAQALLSCIAVH 463
Query: 606 KAYWSSLK 613
+ +W L+
Sbjct: 464 RPHWRCLQ 471
Score = 511 (184.9 bits), Expect = 7.0e-48, P = 7.0e-48
Identities = 96/161 (59%), Positives = 117/161 (72%)
Query: 132 HPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFN 191
HP A L+ G V + VDSVL GES G+ +RPPGHHAEQD P GFCIFN
Sbjct: 635 HPRTFDCATLAA-GLVLQ------AVDSVLRGESRSGICNVRPPGHHAEQDHPHGFCIFN 687
Query: 192 NVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKD 251
NV++AA+YA+ + GL RVLI+DWDVHHGNGTQ +F ++P+VLYIS+HRY+HGSFFP D
Sbjct: 688 NVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPD 747
Query: 252 AGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPM 292
VG+G G GFNVN+ WNKKGM D EY AFQQ+I+P+
Sbjct: 748 GNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPI 788
Score = 438 (159.2 bits), Expect = 2.3e-129, Sum P(2) = 2.3e-129
Identities = 76/141 (53%), Positives = 109/141 (77%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD ++ G++ +G+AIIRPPGHHA + E G+C FNNV++A ++ALD H L R+LI+D+D
Sbjct: 225 LVDHLVAGKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRILIIDYD 284
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG GTQ FYNDPRV+Y S+HR++HGSF+PH ++ H +G G G G+N NV N G
Sbjct: 285 VHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATG 344
Query: 276 MSDPEYIAAFQQVILPMYALD 296
M++ +Y+A FQQ++LP+ AL+
Sbjct: 345 MTNGDYLAIFQQLLLPV-ALE 364
Score = 289 (106.8 bits), Expect = 9.4e-22, P = 9.4e-22
Identities = 56/111 (50%), Positives = 69/111 (62%)
Query: 258 GEGKGEGFNVNVAWNKKGMSDPEYIAAFQQV-ILPMYALDNHGLSRVLILDWDVHHGNGT 316
GE + NV + P F V I YA+ + GL RVLI+DWDVHHGNGT
Sbjct: 659 GESRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGT 718
Query: 317 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 367
Q +F ++P+VLYIS+HRY+HGSFFP D VG+G G GFNVN+ WNK
Sbjct: 719 QHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNK 769
Score = 263 (97.6 bits), Expect = 7.1e-111, Sum P(2) = 7.1e-111
Identities = 48/93 (51%), Positives = 63/93 (67%)
Query: 285 FQQVILP-MYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V L +ALD H L R+LI+D+DVHHG GTQ FYNDPRV+Y S+HR++HGSF+PH
Sbjct: 259 FNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHL 318
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKVVDSVLNGE 376
++ H +G G G G+N NV N + NG+
Sbjct: 319 HESDYHAIGSGAGTGYNFNVPLNAT--GMTNGD 349
Score = 164 (62.8 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 32/62 (51%), Positives = 39/62 (62%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN-HLLALLIYLYGVMYVNP 77
V CGRY+ H H V +HPLA+S ADLSVWCY C AYVD+ L A L L+ + P
Sbjct: 1035 VACGRYVNAHMEQHSVEEQHPLAMSTADLSVWCYACSAYVDHPRLYAYLNPLHEDKFQEP 1094
Query: 78 MS 79
M+
Sbjct: 1095 MA 1096
Score = 126 (49.4 bits), Expect = 0.00044, P = 0.00044
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 46 DLSVWCYVCEAYVDNHLLALLIYLYGVMYVNP---MSIIITEHPLALSFADLSVWCYVCE 102
D C VC + +N + ++ YVN + +HPLA+S ADLSVWCY C
Sbjct: 1012 DSGAECSVCGSTGENWVCLSCRHVACGRYVNAHMEQHSVEEQHPLAMSTADLSVWCYACS 1071
Query: 103 AYVDN-HLLALLIYLYGVMYVKPMS 126
AYVD+ L A L L+ + +PM+
Sbjct: 1072 AYVDHPRLYAYLNPLHEDKFQEPMA 1096
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 817 (292.7 bits), Expect = 2.8e-123, Sum P(2) = 2.8e-123
Identities = 149/251 (59%), Positives = 188/251 (74%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLIL 424
++V++VL+GE +G A++RPPGHHAEQD CGFC FN+V+VAA++A + H L R+LI+
Sbjct: 588 RLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHAL-RILIV 646
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWDVHHGNGTQ MF +DP VLY+S+HRYDHG+FFP + +G G GF VNVAWN
Sbjct: 647 DWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWN 706
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
M D +Y+AA+ +++LPIAY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L
Sbjct: 707 GPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLL 766
Query: 545 KALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISS 604
LA GRIIL LEGGYN++SIS +M CT++LLGDP PLL S A+ SI ETI
Sbjct: 767 MGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQV 826
Query: 605 HKAYWSSLKFL 615
H+ YW SL+ +
Sbjct: 827 HRRYWRSLRVM 837
Score = 645 (232.1 bits), Expect = 3.4e-62, P = 3.4e-62
Identities = 119/246 (48%), Positives = 165/246 (67%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DW
Sbjct: 193 RLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDW 252
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+
Sbjct: 253 DVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQV 312
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM D +YIAAF V+LP+A +F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 313 GMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMG 372
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES SA S+ + + +
Sbjct: 373 LAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALE 432
Query: 607 AYWSSL 612
+W L
Sbjct: 433 PFWEVL 438
Score = 453 (164.5 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 78/139 (56%), Positives = 105/139 (75%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLILD 213
+V++VL+GE +G A++RPPGHHAEQD CGFC FN+V+VAA++A + H L R+LI+D
Sbjct: 589 LVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHAL-RILIVD 647
Query: 214 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 273
WDVHHGNGTQ MF +DP VLY+S+HRYDHG+FFP + +G G GF VNVAWN
Sbjct: 648 WDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNG 707
Query: 274 KGMSDPEYIAAFQQVILPM 292
M D +Y+AA+ +++LP+
Sbjct: 708 PRMGDADYLAAWHRLVLPI 726
Score = 425 (154.7 bits), Expect = 2.8e-123, Sum P(2) = 2.8e-123
Identities = 77/141 (54%), Positives = 102/141 (72%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DWD
Sbjct: 194 LVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWD 253
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+ G
Sbjct: 254 VHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVG 313
Query: 276 MSDPEYIAAFQQVILPMYALD 296
M D +YIAAF V+LP+ AL+
Sbjct: 314 MRDADYIAAFLHVLLPV-ALE 333
Score = 253 (94.1 bits), Expect = 9.6e-59, Sum P(3) = 9.6e-59
Identities = 43/72 (59%), Positives = 52/72 (72%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEG 354
+ H L R+LI+DWDVHHGNGTQ MF +DP VLY+S+HRYDHG+FFP + +G
Sbjct: 636 ISGHAL-RILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRA 694
Query: 355 KGEGFNVNVAWN 366
G GF VNVAWN
Sbjct: 695 AGTGFTVNVAWN 706
Score = 241 (89.9 bits), Expect = 7.5e-104, Sum P(2) = 7.5e-104
Identities = 43/85 (50%), Positives = 55/85 (64%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + YA H + RVLI+DWDVHHG GTQ F DP VLY S+HRY+ G F+PH
Sbjct: 228 FNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHL 287
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
K + G G+G+G+ +NV WN+V
Sbjct: 288 KASNWSTTGFGQGQGYTINVPWNQV 312
Score = 140 (54.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLLALL 66
V CGRYI H + H ++ HPL LS+ DLS WCY C+AYV H ALL
Sbjct: 1151 VYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYV--HHQALL 1196
Score = 40 (19.1 bits), Expect = 9.6e-59, Sum P(3) = 9.6e-59
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 379 HGVAIIRPPGHHAEQDEPCGFC 400
H VA+ P + +PCG C
Sbjct: 1115 HLVAVCPIPAAGLDVTQPCGDC 1136
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 817 (292.7 bits), Expect = 3.6e-123, Sum P(2) = 3.6e-123
Identities = 149/251 (59%), Positives = 188/251 (74%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLIL 424
++V++VL+GE +G A++RPPGHHAEQD CGFC FN+V+VAA++A + H L R+LI+
Sbjct: 602 RLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHAL-RILIV 660
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWDVHHGNGTQ MF +DP VLY+S+HRYDHG+FFP + +G G GF VNVAWN
Sbjct: 661 DWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWN 720
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
M D +Y+AA+ +++LPIAY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L
Sbjct: 721 GPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLL 780
Query: 545 KALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISS 604
LA GRIIL LEGGYN++SIS +M CT++LLGDP PLL S A+ SI ETI
Sbjct: 781 MGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQV 840
Query: 605 HKAYWSSLKFL 615
H+ YW SL+ +
Sbjct: 841 HRRYWRSLRVM 851
Score = 645 (232.1 bits), Expect = 3.5e-62, P = 3.5e-62
Identities = 119/246 (48%), Positives = 165/246 (67%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DW
Sbjct: 207 RLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDW 266
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+
Sbjct: 267 DVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQV 326
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM D +YIAAF V+LP+A +F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 327 GMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMG 386
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES SA S+ + + +
Sbjct: 387 LAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALE 446
Query: 607 AYWSSL 612
+W L
Sbjct: 447 PFWEVL 452
Score = 453 (164.5 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 78/139 (56%), Positives = 105/139 (75%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLILD 213
+V++VL+GE +G A++RPPGHHAEQD CGFC FN+V+VAA++A + H L R+LI+D
Sbjct: 603 LVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHAL-RILIVD 661
Query: 214 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 273
WDVHHGNGTQ MF +DP VLY+S+HRYDHG+FFP + +G G GF VNVAWN
Sbjct: 662 WDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNG 721
Query: 274 KGMSDPEYIAAFQQVILPM 292
M D +Y+AA+ +++LP+
Sbjct: 722 PRMGDADYLAAWHRLVLPI 740
Score = 425 (154.7 bits), Expect = 3.6e-123, Sum P(2) = 3.6e-123
Identities = 77/141 (54%), Positives = 102/141 (72%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DWD
Sbjct: 208 LVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWD 267
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+ G
Sbjct: 268 VHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVG 327
Query: 276 MSDPEYIAAFQQVILPMYALD 296
M D +YIAAF V+LP+ AL+
Sbjct: 328 MRDADYIAAFLHVLLPV-ALE 347
Score = 253 (94.1 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 43/72 (59%), Positives = 52/72 (72%)
Query: 295 LDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEG 354
+ H L R+LI+DWDVHHGNGTQ MF +DP VLY+S+HRYDHG+FFP + +G
Sbjct: 650 ISGHAL-RILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRA 708
Query: 355 KGEGFNVNVAWN 366
G GF VNVAWN
Sbjct: 709 AGTGFTVNVAWN 720
Score = 241 (89.9 bits), Expect = 9.6e-104, Sum P(2) = 9.6e-104
Identities = 43/85 (50%), Positives = 55/85 (64%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + YA H + RVLI+DWDVHHG GTQ F DP VLY S+HRY+ G F+PH
Sbjct: 242 FNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHL 301
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
K + G G+G+G+ +NV WN+V
Sbjct: 302 KASNWSTTGFGQGQGYTINVPWNQV 326
Score = 140 (54.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLLALL 66
V CGRYI H + H ++ HPL LS+ DLS WCY C+AYV H ALL
Sbjct: 1165 VYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYV--HHQALL 1210
Score = 40 (19.1 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 379 HGVAIIRPPGHHAEQDEPCGFC 400
H VA+ P + +PCG C
Sbjct: 1129 HLVAVCPIPAAGLDVTQPCGDC 1150
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 800 (286.7 bits), Expect = 7.5e-122, Sum P(2) = 7.5e-122
Identities = 148/262 (56%), Positives = 191/262 (72%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLIL 424
++V++VL GE +GVA++RPPGHHAE D CGFC FN+V+VAA++A + H L R+LI+
Sbjct: 588 RLVEAVLAGEVLNGVAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHAL-RILIV 646
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWD+HHGNGTQ +F DP VLYIS+HRYDHG+FFP + +G+ G GF VNVAWN
Sbjct: 647 DWDIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWN 706
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
M D +Y+AA+ +++LP+AY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L
Sbjct: 707 GPRMGDADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQL 766
Query: 545 KALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISS 604
LA G IIL LEGGYN++SIS +M CT++LLGDPLPLL S A SI +TI
Sbjct: 767 MGLANGHIILILEGGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQASITKTIQV 826
Query: 605 HKAYWSSLKFLVALPENKLLSA 626
H+ YW SL+ + + +L S+
Sbjct: 827 HRRYWRSLRVMKRKNKEELSSS 848
Score = 665 (239.2 bits), Expect = 1.7e-64, P = 1.7e-64
Identities = 124/262 (47%), Positives = 175/262 (66%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DW
Sbjct: 193 RLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDW 252
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+
Sbjct: 253 DVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQV 312
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM D +YIAAF V+LP+A++F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 313 GMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMG 372
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA+G++IL+LEGGYN+ S++ ++ LLGDP P+LES SA S+ T+ + +
Sbjct: 373 LAEGKLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLESPGAPCPSAQASLSCTLEALE 432
Query: 607 AYWSSL-KFLVALPENKLLSAD 627
+W SL + + +L E + D
Sbjct: 433 PFWESLVRSVESLEEKDTVEKD 454
Score = 442 (160.7 bits), Expect = 5.4e-39, P = 5.4e-39
Identities = 77/139 (55%), Positives = 104/139 (74%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLILD 213
+V++VL GE +GVA++RPPGHHAE D CGFC FN+V+VAA++A + H L R+LI+D
Sbjct: 589 LVEAVLAGEVLNGVAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHAL-RILIVD 647
Query: 214 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 273
WD+HHGNGTQ +F DP VLYIS+HRYDHG+FFP + +G+ G GF VNVAWN
Sbjct: 648 WDIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNG 707
Query: 274 KGMSDPEYIAAFQQVILPM 292
M D +Y+AA+ +++LP+
Sbjct: 708 PRMGDADYLAAWHRLVLPV 726
Score = 421 (153.3 bits), Expect = 7.5e-122, Sum P(2) = 7.5e-122
Identities = 74/137 (54%), Positives = 98/137 (71%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DWD
Sbjct: 194 LVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWD 253
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG G Q F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+ G
Sbjct: 254 VHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQVG 313
Query: 276 MSDPEYIAAFQQVILPM 292
M D +YIAAF V+LP+
Sbjct: 314 MQDADYIAAFLHVLLPV 330
Score = 251 (93.4 bits), Expect = 3.6e-58, Sum P(2) = 3.6e-58
Identities = 43/73 (58%), Positives = 53/73 (72%)
Query: 294 ALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE 353
A+ H L R+LI+DWD+HHGNGTQ +F DP VLYIS+HRYDHG+FFP + +G+
Sbjct: 635 AISGHAL-RILIVDWDIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGK 693
Query: 354 GKGEGFNVNVAWN 366
G GF VNVAWN
Sbjct: 694 ATGTGFTVNVAWN 706
Score = 237 (88.5 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 42/85 (49%), Positives = 54/85 (63%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + YA H + RVLI+DWDVHHG G Q F DP VLY S+HRY+ G F+PH
Sbjct: 228 FNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHL 287
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
K + G G+G+G+ +NV WN+V
Sbjct: 288 KASNWSTTGLGQGQGYTINVPWNQV 312
Score = 143 (55.4 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 27/48 (56%), Positives = 33/48 (68%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNH-LLAL 65
V CGRYI H + H + HPL LS+ADLS WCY C+AYV + LLA+
Sbjct: 1064 VYCGRYINAHMLQHHEGSGHPLVLSYADLSAWCYHCQAYVHHKDLLAV 1111
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 796 (285.3 bits), Expect = 1.2e-121, Sum P(2) = 1.2e-121
Identities = 145/251 (57%), Positives = 186/251 (74%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLIL 424
++V++VL E +G A++RPPGHHAE+D CGFC FN+V+VAA++A + H L R+LI+
Sbjct: 601 RLVEAVLAREVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHAL-RILIV 659
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWDVHHGNGTQ +F DP VLYIS+HRYDHG+FFP + VG+ G GF VNVAWN
Sbjct: 660 DWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWN 719
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
+ D +Y+AA+ +++LPIAY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L
Sbjct: 720 GPRVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLL 779
Query: 545 KALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISS 604
LA GR++L LEGGYN++SIS +M CT++LLGDP PLL S A+ SI ETI
Sbjct: 780 MGLANGRVVLILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQV 839
Query: 605 HKAYWSSLKFL 615
H+ YW SL+ +
Sbjct: 840 HRRYWRSLRVM 850
Score = 649 (233.5 bits), Expect = 1.0e-62, P = 1.0e-62
Identities = 120/264 (45%), Positives = 173/264 (65%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL E +G+AI+RPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DW
Sbjct: 207 RLVDAVLRNEIRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDW 266
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ F DP VLY S+HRY+ G F+PH K + +G G+G+G+ +NV WN+
Sbjct: 267 DVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQV 326
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM D +YIAAF +++LP+A +F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 327 GMRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMG 386
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES SA S+ + + +
Sbjct: 387 LAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPILESPSAPCPSAQASLFCALEALE 446
Query: 607 AYWSSLKFLVALPENKLLSADYAQ 630
+W L E +L + A+
Sbjct: 447 PFWEVLVRSAEALEEDILEEEKAE 470
Score = 435 (158.2 bits), Expect = 4.2e-38, P = 4.2e-38
Identities = 82/162 (50%), Positives = 111/162 (68%)
Query: 133 PLALSFADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNN 192
P + A L+ G VC +V++VL E +G A++RPPGHHAE+D CGFC FN+
Sbjct: 586 PSTFACAQLAT-GSVCR------LVEAVLAREVLNGTAVVRPPGHHAERDAACGFCFFNS 638
Query: 193 VSVAAKYA--LDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSK 250
V+VAA++A + H L R+LI+DWDVHHGNGTQ +F DP VLYIS+HRYDHG+FFP
Sbjct: 639 VAVAARHAQAISGHAL-RILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGD 697
Query: 251 DAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPM 292
+ VG+ G GF VNVAWN + D +Y+AA+ +++LP+
Sbjct: 698 EGASSQVGQAAGTGFTVNVAWNGPRVGDADYLAAWHRLVLPI 739
Score = 428 (155.7 bits), Expect = 1.2e-121, Sum P(2) = 1.2e-121
Identities = 75/141 (53%), Positives = 104/141 (73%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL E +G+AI+RPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DWD
Sbjct: 208 LVDAVLRNEIRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWD 267
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG GTQ F DP VLY S+HRY+ G F+PH K + +G G+G+G+ +NV WN+ G
Sbjct: 268 VHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVG 327
Query: 276 MSDPEYIAAFQQVILPMYALD 296
M D +YIAAF +++LP+ AL+
Sbjct: 328 MRDADYIAAFLRLLLPV-ALE 347
Score = 256 (95.2 bits), Expect = 1.5e-59, Sum P(2) = 1.5e-59
Identities = 45/73 (61%), Positives = 53/73 (72%)
Query: 294 ALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE 353
A+ H L R+LI+DWDVHHGNGTQ +F DP VLYIS+HRYDHG+FFP + VG+
Sbjct: 648 AISGHAL-RILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQ 706
Query: 354 GKGEGFNVNVAWN 366
G GF VNVAWN
Sbjct: 707 AAGTGFTVNVAWN 719
Score = 247 (92.0 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + YA H + RVLI+DWDVHHG GTQ F DP VLY S+HRY+ G F+PH
Sbjct: 242 FNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHL 301
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
K + +G G+G+G+ +NV WN+V
Sbjct: 302 KASNWSTIGFGQGQGYTINVPWNQV 326
Score = 142 (55.0 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 28/48 (58%), Positives = 31/48 (64%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLLALL 66
V CGRYI H + H + HPL LS+ DLS WCY CEAYV H ALL
Sbjct: 1093 VYCGRYISAHMLHHHEDSGHPLVLSYVDLSTWCYNCEAYV--HHQALL 1138
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 799 (286.3 bits), Expect = 1.4e-121, Sum P(2) = 1.4e-121
Identities = 147/249 (59%), Positives = 185/249 (74%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLIL 424
++V++VL GE +G+A++RPPGHHAE+D CGFC FN+V+VAA++A + H L R+LI+
Sbjct: 597 RLVEAVLAGEVLNGIAVVRPPGHHAERDSACGFCFFNSVAVAARHAQAISGHAL-RILIV 655
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
DWDVHHGNGTQ +F DP VLYIS+HRYDHG+FFP + +G+ G GF VNVAWN
Sbjct: 656 DWDVHHGNGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWN 715
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
+ DPEY+AA+ +++LPIAY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L
Sbjct: 716 GPRVGDPEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPECYAHLTHLL 775
Query: 545 KALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISS 604
LA GRIIL LEGGYN+ SIS +M CT++LLGD PLL S A+ SI ET
Sbjct: 776 MGLANGRIILILEGGYNLISISESMAACTRSLLGDSPPLLTLLRPPLSRALASIAETTQI 835
Query: 605 HKAYWSSLK 613
H+ YW SL+
Sbjct: 836 HRRYWRSLR 844
Score = 640 (230.4 bits), Expect = 8.8e-62, P = 8.8e-62
Identities = 120/265 (45%), Positives = 171/265 (64%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL E +G+AIIRPPGHHA+ G+C+FN+V++AA+YA H + RVLI+DW
Sbjct: 203 RLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVDW 262
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+
Sbjct: 263 DVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQV 322
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM D +YIAAF ++LP+A +F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 323 GMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMG 382
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA G++IL+LEGGYN+ S++ ++ LLGDP PLLE SA S+ + + +
Sbjct: 383 LAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPLLEFPGAPCPSAQASLSCALEALE 442
Query: 607 AYWSSL-KFLVALPENKLLSADYAQ 630
+W L + L + + D+ +
Sbjct: 443 PFWEVLVRSAETLEDEDTVEGDHVE 467
Score = 456 (165.6 bits), Expect = 7.0e-41, P = 7.0e-41
Identities = 78/139 (56%), Positives = 106/139 (76%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLILD 213
+V++VL GE +G+A++RPPGHHAE+D CGFC FN+V+VAA++A + H L R+LI+D
Sbjct: 598 LVEAVLAGEVLNGIAVVRPPGHHAERDSACGFCFFNSVAVAARHAQAISGHAL-RILIVD 656
Query: 214 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 273
WDVHHGNGTQ +F DP VLYIS+HRYDHG+FFP + +G+ G GF VNVAWN
Sbjct: 657 WDVHHGNGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNG 716
Query: 274 KGMSDPEYIAAFQQVILPM 292
+ DPEY+AA+ +++LP+
Sbjct: 717 PRVGDPEYLAAWHRLVLPI 735
Score = 420 (152.9 bits), Expect = 1.4e-121, Sum P(2) = 1.4e-121
Identities = 75/141 (53%), Positives = 102/141 (72%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL E +G+AIIRPPGHHA+ G+C+FN+V++AA+YA H + RVLI+DWD
Sbjct: 204 LVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVDWD 263
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+ G
Sbjct: 264 VHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVG 323
Query: 276 MSDPEYIAAFQQVILPMYALD 296
M D +YIAAF ++LP+ AL+
Sbjct: 324 MRDADYIAAFLHLLLPV-ALE 343
Score = 256 (95.2 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 44/73 (60%), Positives = 53/73 (72%)
Query: 294 ALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE 353
A+ H L R+LI+DWDVHHGNGTQ +F DP VLYIS+HRYDHG+FFP + +G+
Sbjct: 644 AISGHAL-RILIVDWDVHHGNGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQ 702
Query: 354 GKGEGFNVNVAWN 366
G GF VNVAWN
Sbjct: 703 AAGTGFTVNVAWN 715
Score = 243 (90.6 bits), Expect = 6.8e-103, Sum P(2) = 6.8e-103
Identities = 44/85 (51%), Positives = 55/85 (64%)
Query: 285 FQQVILPM-YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V L YA H + RVLI+DWDVHHG GTQ F DP VLY S+HRY+ G F+PH
Sbjct: 238 FNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHL 297
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
K + G G+G+G+ +NV WN+V
Sbjct: 298 KASNWSTTGFGQGQGYTINVPWNQV 322
Score = 146 (56.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNH-LLAL 65
V CGRYI H + H S+ HP+ LS+ADLS WCY C+AYV + LLA+
Sbjct: 1066 VCCGRYINAHMLQHHESSGHPMVLSYADLSTWCYPCQAYVHHEALLAV 1113
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 775 (277.9 bits), Expect = 2.1e-119, Sum P(2) = 2.1e-119
Identities = 142/250 (56%), Positives = 181/250 (72%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLS-RVLILD 425
++V++VL+GE +G+AI+RPPGHHAE D CGFC FN+V+VAA++A G + R+LI+D
Sbjct: 590 RLVEAVLSGEVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGRALRILIVD 649
Query: 426 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 485
WDVHHGNGTQ +F DP VLY+S+HRYD G+FFP + VG G GF VNV WN
Sbjct: 650 WDVHHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNG 709
Query: 486 KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLK 545
M D +Y+A + +++LPIAY+FNPELVL+SAG+DA DPLGGC+V+PE YAH TH L
Sbjct: 710 PRMGDADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLM 769
Query: 546 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSH 605
LA GRIIL LEGGYN++SIS +M CT +LLGDP P L S S A+ SI E I H
Sbjct: 770 GLAGGRIILILEGGYNLTSISESMAACTHSLLGDPPPQLTSLRPPQSGALASISEVIQVH 829
Query: 606 KAYWSSLKFL 615
+ YW SL+ +
Sbjct: 830 RKYWRSLRLM 839
Score = 666 (239.5 bits), Expect = 1.5e-64, P = 1.5e-64
Identities = 119/250 (47%), Positives = 176/250 (70%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+V+ E +G+A+IRPPGHHA++ G+C+FN+++VAA+YA H + R+LI+DW
Sbjct: 192 RLVDAVMGAEIRNGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDW 251
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ +F DP VLY S+HRY+HG F+PH K + G G+G+G+ +NV WN+
Sbjct: 252 DVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQV 311
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPL---GGCKVSPEAYAHFTHW 543
GM D +YIAAF ++LP+A++F P+LVLV+AG+DA DP G +P +AH TH+
Sbjct: 312 GMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKVRQGEMSATPAGFAHLTHF 371
Query: 544 LKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETIS 603
L LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES + +SA TSI T+
Sbjct: 372 LMGLAGGKLILSLEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVAPCASAQTSISCTLE 431
Query: 604 SHKAYWSSLK 613
+ + +W L+
Sbjct: 432 ALEPFWEVLE 441
Score = 430 (156.4 bits), Expect = 2.1e-119, Sum P(2) = 2.1e-119
Identities = 75/159 (47%), Positives = 111/159 (69%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+V+ E +G+A+IRPPGHHA++ G+C+FN+++VAA+YA H + R+LI+DWD
Sbjct: 193 LVDAVMGAEIRNGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWD 252
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG GTQ +F DP VLY S+HRY+HG F+PH K + G G+G+G+ +NV WN+ G
Sbjct: 253 VHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVG 312
Query: 276 MSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGN 314
M D +YIAAF ++LP+ A + ++ +D HG+
Sbjct: 313 MRDADYIAAFLHILLPV-AFEFQPQLVLVAAGFDALHGD 350
Score = 422 (153.6 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 74/138 (53%), Positives = 100/138 (72%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLS-RVLILDW 214
+V++VL+GE +G+AI+RPPGHHAE D CGFC FN+V+VAA++A G + R+LI+DW
Sbjct: 591 LVEAVLSGEVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGRALRILIVDW 650
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHGNGTQ +F DP VLY+S+HRYD G+FFP + VG G GF VNV WN
Sbjct: 651 DVHHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGP 710
Query: 275 GMSDPEYIAAFQQVILPM 292
M D +Y+A + +++LP+
Sbjct: 711 RMGDADYLATWHRLVLPI 728
Score = 249 (92.7 bits), Expect = 2.7e-100, Sum P(2) = 2.7e-100
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 352
YA H + R+LI+DWDVHHG GTQ +F DP VLY S+HRY+HG F+PH K + G
Sbjct: 236 YAQKKHRIQRILIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTG 295
Query: 353 EGKGEGFNVNVAWNKV 368
G+G+G+ +NV WN+V
Sbjct: 296 FGQGQGYTINVPWNQV 311
Score = 231 (86.4 bits), Expect = 3.5e-57, Sum P(2) = 3.5e-57
Identities = 39/65 (60%), Positives = 46/65 (70%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R+LI+DWDVHHGNGTQ +F DP VLY+S+HRYD G+FFP + VG G GF V
Sbjct: 644 RILIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTV 703
Query: 362 NVAWN 366
NV WN
Sbjct: 704 NVPWN 708
Score = 136 (52.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYV 58
V C RY+ H + H ++EHPL LS DLS WCY+C+AYV
Sbjct: 1091 VYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYLCQAYV 1130
Score = 124 (48.7 bits), Expect = 0.00073, P = 0.00073
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 39 PLALSFADLSVWCYVCEAYVDNHLLALLIYLYGVMYVNPMSII---ITEHPLALSFADLS 95
P+ + D+S C C + +N + +Y YVN + +EHPL LS DLS
Sbjct: 1061 PIPAAGLDVSQPCKTCGSVQENWVCLTCYQVYCSRYVNAHMVCHHEASEHPLVLSCVDLS 1120
Query: 96 VWCYVCEAYV 105
WCY+C+AYV
Sbjct: 1121 TWCYLCQAYV 1130
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 750 (269.1 bits), Expect = 1.5e-118, Sum P(2) = 1.5e-118
Identities = 140/257 (54%), Positives = 185/257 (71%)
Query: 371 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLILDWDV 428
++L G+ + VAI+RPPGHHAE+D CGFC FN ++ A+YA + L RVLI+DWDV
Sbjct: 555 AILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESL-RVLIVDWDV 613
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHGNGTQ +F D VLYIS+HRY+ G+FFP+S+DA VG GKG G+NVN+ WN M
Sbjct: 614 HHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKM 673
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
DPEY+AAF +++PIA +F PELVLVSAG+DA DPLGG +V+PE YAH TH L +LA
Sbjct: 674 GDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLA 733
Query: 549 QGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAY 608
GR+++ LEGGYN++SIS +M++CT LLGD P L+ + +SA SI + +H +
Sbjct: 734 AGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLTPLKTSATVSINNVLRAHAPF 793
Query: 609 WSSLKFLVALPENKLLS 625
WSSL+ V +PE+ LS
Sbjct: 794 WSSLR--VNIPESLRLS 808
Score = 720 (258.5 bits), Expect = 1.2e-70, P = 1.2e-70
Identities = 129/247 (52%), Positives = 178/247 (72%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD V+ + +G +I RPPGHHA+ D+ GFC+FNN+++AA+YA H + RVLI+DW
Sbjct: 170 QLVDKVMTSQLRNGFSINRPPGHHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDW 229
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q +F DP VLY SVHRY+ GSF+PH K++ +VG G G+G+N+N+ WNK
Sbjct: 230 DVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKV 289
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM +YI AFQQ++LP+AY+F P+LVLV+AG+DA + DP GG +VSPE ++ TH LK
Sbjct: 290 GMESGDYITAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKG 349
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
+AQGR++LALEGGYN+ S + + ++LLGDP P L S SA+ SI +TIS
Sbjct: 350 VAQGRLVLALEGGYNLQSTAEGVCASMRSLLGDPCPHLPSSGAPCESALKSISKTISDLY 409
Query: 607 AYWSSLK 613
+W SL+
Sbjct: 410 PFWKSLQ 416
Score = 443 (161.0 bits), Expect = 1.5e-118, Sum P(2) = 1.5e-118
Identities = 83/161 (51%), Positives = 112/161 (69%)
Query: 132 HPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFN 191
HP S A LSV G V + +VD V+ + +G +I RPPGHHA+ D+ GFC+FN
Sbjct: 154 HPGFFSSACLSV-GSVLQ------LVDKVMTSQLRNGFSINRPPGHHAQADKMNGFCMFN 206
Query: 192 NVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKD 251
N+++AA+YA H + RVLI+DWDVHHG G Q +F DP VLY SVHRY+ GSF+PH K+
Sbjct: 207 NLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKE 266
Query: 252 AGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPM 292
+ +VG G G+G+N+N+ WNK GM +YI AFQQ++LP+
Sbjct: 267 SDSSSVGSGAGQGYNINLPWNKVGMESGDYITAFQQLLLPV 307
Score = 430 (156.4 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 76/136 (55%), Positives = 100/136 (73%)
Query: 159 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYA--LDNHGLSRVLILDWDV 216
++L G+ + VAI+RPPGHHAE+D CGFC FN ++ A+YA + L RVLI+DWDV
Sbjct: 555 AILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESL-RVLIVDWDV 613
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQ +F D VLYIS+HRY+ G+FFP+S+DA VG GKG G+NVN+ WN M
Sbjct: 614 HHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKM 673
Query: 277 SDPEYIAAFQQVILPM 292
DPEY+AAF +++P+
Sbjct: 674 GDPEYMAAFHHLVMPI 689
Score = 264 (98.0 bits), Expect = 1.2e-99, Sum P(2) = 1.2e-99
Identities = 50/107 (46%), Positives = 66/107 (61%)
Query: 264 GFNVNVAWNKKGMSDP-EYIAAFQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFY 321
GF++N +D F + I YA H + RVLI+DWDVHHG G Q +F
Sbjct: 183 GFSINRPPGHHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYIFE 242
Query: 322 NDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKV 368
DP VLY SVHRY+ GSF+PH K++ +VG G G+G+N+N+ WNKV
Sbjct: 243 EDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKV 289
Score = 247 (92.0 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 43/65 (66%), Positives = 52/65 (80%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVLI+DWDVHHGNGTQ +F D VLYIS+HRY+ G+FFP+S+DA VG GKG G+NV
Sbjct: 605 RVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNV 664
Query: 362 NVAWN 366
N+ WN
Sbjct: 665 NIPWN 669
Score = 168 (64.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 7 LCYFVIKGNFSLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLL 63
+C F K V CGRY+ +H + HG + HP+ LSFADLSVWCY CE+YV N +L
Sbjct: 1010 ICLFCYK-----VLCGRYVNQHMVTHGQESGHPVVLSFADLSVWCYACESYVHNKVL 1061
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 765 (274.4 bits), Expect = 2.8e-118, Sum P(2) = 2.8e-118
Identities = 140/250 (56%), Positives = 182/250 (72%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLS-RVLILD 425
++V++VL+GE +G+A++RPPGHHAE + CGFC FN+V+VAA++A G + R+LI+D
Sbjct: 587 RLVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVD 646
Query: 426 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 485
WDVHHGNGTQ +F +DP VLY+S+HRYD G+FFP + VG G GF VNV WN
Sbjct: 647 WDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNG 706
Query: 486 KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLK 545
M D +Y+AA+ +++LPIAY+FNPELVL+SAG+DA DPLGGC+V+PE YAH TH L
Sbjct: 707 PRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLM 766
Query: 546 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSH 605
LA GRIIL LEGGYN++SIS +M CT +LLGDP P L S A+ SI E I H
Sbjct: 767 GLAGGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSISEVIQVH 826
Query: 606 KAYWSSLKFL 615
+ YW SL+ +
Sbjct: 827 RKYWRSLRLM 836
Score = 671 (241.3 bits), Expect = 4.2e-65, P = 4.2e-65
Identities = 121/254 (47%), Positives = 177/254 (69%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+++ E +G+A+IRPPGHHA+ + G+C+FN+++VAA+YA H + RVLI+DW
Sbjct: 192 RLVDALMGAEIRNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDW 251
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ +F DP VLY S+HRY+HG F+PH K + +G G+G+G+ +NV WN+
Sbjct: 252 DVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQT 311
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM D +YIAAF ++LP+A +F P+LVLV+AG+DA DP G +P +AH TH L
Sbjct: 312 GMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMG 371
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES + +SA TSI T+ + +
Sbjct: 372 LAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQTSIYCTLEALE 431
Query: 607 AYWSSLKFLVALPE 620
+W L+ V E
Sbjct: 432 PFWEVLERSVETQE 445
Score = 430 (156.4 bits), Expect = 2.8e-118, Sum P(2) = 2.8e-118
Identities = 77/160 (48%), Positives = 113/160 (70%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+++ E +G+A+IRPPGHHA+ + G+C+FN+++VAA+YA H + RVLI+DWD
Sbjct: 193 LVDALMGAEIRNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWD 252
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG GTQ +F DP VLY S+HRY+HG F+PH K + +G G+G+G+ +NV WN+ G
Sbjct: 253 VHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTG 312
Query: 276 MSDPEYIAAFQQVILPMYALDNHGLSRVLIL-DWDVHHGN 314
M D +YIAAF ++LP+ + L VL+ +D HG+
Sbjct: 313 MRDADYIAAFLHILLPVASEFQPQL--VLVAAGFDALHGD 350
Score = 418 (152.2 bits), Expect = 4.2e-36, P = 4.2e-36
Identities = 73/138 (52%), Positives = 102/138 (73%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLS-RVLILDW 214
+V++VL+GE +G+A++RPPGHHAE + CGFC FN+V+VAA++A G + R+LI+DW
Sbjct: 588 LVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVDW 647
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHGNGTQ +F +DP VLY+S+HRYD G+FFP + VG G GF VNV WN
Sbjct: 648 DVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGP 707
Query: 275 GMSDPEYIAAFQQVILPM 292
M D +Y+AA+ +++LP+
Sbjct: 708 RMGDADYLAAWHRLVLPI 725
Score = 249 (92.7 bits), Expect = 3.6e-99, Sum P(2) = 3.6e-99
Identities = 41/75 (54%), Positives = 54/75 (72%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 352
YA H + RVLI+DWDVHHG GTQ +F DP VLY S+HRY+HG F+PH K + +G
Sbjct: 236 YAQKKHRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIG 295
Query: 353 EGKGEGFNVNVAWNK 367
G+G+G+ +NV WN+
Sbjct: 296 FGQGQGYTINVPWNQ 310
Score = 229 (85.7 bits), Expect = 5.6e-57, Sum P(2) = 5.6e-57
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R+LI+DWDVHHGNGTQ +F +DP VLY+S+HRYD G+FFP + VG G GF V
Sbjct: 641 RILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTV 700
Query: 362 NVAWN 366
NV WN
Sbjct: 701 NVPWN 705
Score = 139 (54.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYV 58
V C RY+ H + H ++EHPL LS DLS WCYVC+AYV
Sbjct: 1085 VYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYVCQAYV 1124
Score = 126 (49.4 bits), Expect = 0.00044, P = 0.00044
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 39 PLALSFADLSVWCYVCEAYVDNHLLALLIYLYGVMYVNPMSII---ITEHPLALSFADLS 95
P+ + D+S C C +N + +Y YVN + +EHPL LS DLS
Sbjct: 1055 PIPAAGLDVSQPCKTCGTVQENWVCLTCYQVYCSRYVNAHMVCHHEASEHPLVLSCVDLS 1114
Query: 96 VWCYVCEAYV 105
WCYVC+AYV
Sbjct: 1115 TWCYVCQAYV 1124
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 647 (232.8 bits), Expect = 6.4e-102, Sum P(2) = 6.4e-102
Identities = 133/270 (49%), Positives = 173/270 (64%)
Query: 369 VDSVLNGESA--HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
VD + ++ + + I+RPPGHHA + GFCIFNNV+VAAKYA H RVLILDW
Sbjct: 538 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 597
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHGNGTQ +FY D V+Y+S+HR+D G+F+P + +VGEG GEG +VNV ++
Sbjct: 598 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGV 657
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
M D EY AFQ+VI+PIAYQFNP+LVL+SAG+DA V+DPLG KV+PE +A T+ L +
Sbjct: 658 QMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSS 717
Query: 547 LAQGRIILALEGGYNISSISY-AMTLCTKALLGDPLPLLESDLD--------INSSAVTS 597
LA GRII LEGGYN++SIS A +C L L + + I SS + +
Sbjct: 718 LAGGRIITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKT 777
Query: 598 IKETISSHKAYWSSLKFLVALPENKLLSAD 627
I+E + + YWS LK P N L D
Sbjct: 778 IREVCAVQQKYWSILKGFQVTPSNYGLDID 807
Score = 598 (215.6 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 107/247 (43%), Positives = 167/247 (67%)
Query: 368 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
+ + ++ E+++G A++RPPGHHA+ PCGFC+FNNV+ AA+ A + G R+LI+D D
Sbjct: 124 LTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLD 182
Query: 428 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 487
VHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G+N N+A N+ G
Sbjct: 183 VHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETG 242
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 547
+D +Y++ V+LP+A QF+P V++SAG+DA + DPLGG ++P+ Y+H + LK+L
Sbjct: 243 CTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSL 302
Query: 548 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKA 607
AQGR+++ LEGGYN + A+ C + LLG +E + S V S +S +
Sbjct: 303 AQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVSLVSVLRH 362
Query: 608 YWSSLKF 614
+W+ +
Sbjct: 363 HWNCFDY 369
Score = 396 (144.5 bits), Expect = 9.6e-34, P = 9.6e-34
Identities = 73/138 (52%), Positives = 96/138 (69%)
Query: 157 VDSVLNGESA--HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
VD + ++ + + I+RPPGHHA + GFCIFNNV+VAAKYA H RVLILDW
Sbjct: 538 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 597
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHGNGTQ +FY D V+Y+S+HR+D G+F+P + +VGEG GEG +VNV ++
Sbjct: 598 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGV 657
Query: 275 GMSDPEYIAAFQQVILPM 292
M D EY AFQ+VI+P+
Sbjct: 658 QMGDNEYQMAFQRVIMPI 675
Score = 390 (142.3 bits), Expect = 6.4e-102, Sum P(2) = 6.4e-102
Identities = 67/144 (46%), Positives = 103/144 (71%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+ + ++ E+++G A++RPPGHHA+ PCGFC+FNNV+ AA+ A + G R+LI+D D
Sbjct: 124 LTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLD 182
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G+N N+A N+ G
Sbjct: 183 VHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETG 242
Query: 276 MSDPEYIAAFQQVILPMYA-LDNH 298
+D +Y++ V+LP+ D H
Sbjct: 243 CTDSDYLSIIFHVLLPLATQFDPH 266
Score = 234 (87.4 bits), Expect = 6.7e-53, Sum P(2) = 6.7e-53
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + YA H RVLILDWDVHHGNGTQ +FY D V+Y+S+HR+D G+F+P
Sbjct: 573 FNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIG 632
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+ +VGEG GEG +VNV ++ V
Sbjct: 633 EPKDYSDVGEGAGEGMSVNVPFSGV 657
Score = 221 (82.9 bits), Expect = 4.3e-84, Sum P(2) = 4.3e-84
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 299 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 358
G R+LI+D DVHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G
Sbjct: 172 GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLG 231
Query: 359 FNVNVAWNK 367
+N N+A N+
Sbjct: 232 YNANLALNE 240
Score = 164 (62.8 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 21 CGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLL 63
CGR++ EH+M+H +S+ HP+ALS ADLSVWCY C++YV N L
Sbjct: 895 CGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPAL 937
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 647 (232.8 bits), Expect = 6.7e-102, Sum P(2) = 6.7e-102
Identities = 133/270 (49%), Positives = 173/270 (64%)
Query: 369 VDSVLNGESA--HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
VD + ++ + + I+RPPGHHA + GFCIFNNV+VAAKYA H RVLILDW
Sbjct: 540 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 599
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHGNGTQ +FY D V+Y+S+HR+D G+F+P + +VGEG GEG +VNV ++
Sbjct: 600 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGV 659
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
M D EY AFQ+VI+PIAYQFNP+LVL+SAG+DA V+DPLG KV+PE +A T+ L +
Sbjct: 660 QMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSS 719
Query: 547 LAQGRIILALEGGYNISSISY-AMTLCTKALLGDPLPLLESDLD--------INSSAVTS 597
LA GRII LEGGYN++SIS A +C L L + + I SS + +
Sbjct: 720 LAGGRIITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKT 779
Query: 598 IKETISSHKAYWSSLKFLVALPENKLLSAD 627
I+E + + YWS LK P N L D
Sbjct: 780 IREVCAVQQKYWSILKGFQVTPSNYGLDID 809
Score = 598 (215.6 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 107/247 (43%), Positives = 167/247 (67%)
Query: 368 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
+ + ++ E+++G A++RPPGHHA+ PCGFC+FNNV+ AA+ A + G R+LI+D D
Sbjct: 126 LTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLD 184
Query: 428 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 487
VHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G+N N+A N+ G
Sbjct: 185 VHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETG 244
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 547
+D +Y++ V+LP+A QF+P V++SAG+DA + DPLGG ++P+ Y+H + LK+L
Sbjct: 245 CTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSL 304
Query: 548 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKA 607
AQGR+++ LEGGYN + A+ C + LLG +E + S V S +S +
Sbjct: 305 AQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVSLVSVLRH 364
Query: 608 YWSSLKF 614
+W+ +
Sbjct: 365 HWNCFDY 371
Score = 396 (144.5 bits), Expect = 9.6e-34, P = 9.6e-34
Identities = 73/138 (52%), Positives = 96/138 (69%)
Query: 157 VDSVLNGESA--HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
VD + ++ + + I+RPPGHHA + GFCIFNNV+VAAKYA H RVLILDW
Sbjct: 540 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 599
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHGNGTQ +FY D V+Y+S+HR+D G+F+P + +VGEG GEG +VNV ++
Sbjct: 600 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGV 659
Query: 275 GMSDPEYIAAFQQVILPM 292
M D EY AFQ+VI+P+
Sbjct: 660 QMGDNEYQMAFQRVIMPI 677
Score = 390 (142.3 bits), Expect = 6.7e-102, Sum P(2) = 6.7e-102
Identities = 67/144 (46%), Positives = 103/144 (71%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+ + ++ E+++G A++RPPGHHA+ PCGFC+FNNV+ AA+ A + G R+LI+D D
Sbjct: 126 LTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLD 184
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G+N N+A N+ G
Sbjct: 185 VHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETG 244
Query: 276 MSDPEYIAAFQQVILPMYA-LDNH 298
+D +Y++ V+LP+ D H
Sbjct: 245 CTDSDYLSIIFHVLLPLATQFDPH 268
Score = 234 (87.4 bits), Expect = 6.7e-53, Sum P(2) = 6.7e-53
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + YA H RVLILDWDVHHGNGTQ +FY D V+Y+S+HR+D G+F+P
Sbjct: 575 FNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIG 634
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+ +VGEG GEG +VNV ++ V
Sbjct: 635 EPKDYSDVGEGAGEGMSVNVPFSGV 659
Score = 221 (82.9 bits), Expect = 4.6e-84, Sum P(2) = 4.6e-84
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 299 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 358
G R+LI+D DVHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G
Sbjct: 174 GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLG 233
Query: 359 FNVNVAWNK 367
+N N+A N+
Sbjct: 234 YNANLALNE 242
Score = 164 (62.8 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 21 CGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLL 63
CGR++ EH+M+H +S+ HP+ALS ADLSVWCY C++YV N L
Sbjct: 897 CGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPAL 939
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 647 (232.8 bits), Expect = 6.7e-102, Sum P(2) = 6.7e-102
Identities = 133/270 (49%), Positives = 173/270 (64%)
Query: 369 VDSVLNGESA--HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
VD + ++ + + I+RPPGHHA + GFCIFNNV+VAAKYA H RVLILDW
Sbjct: 540 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 599
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHGNGTQ +FY D V+Y+S+HR+D G+F+P + +VGEG GEG +VNV ++
Sbjct: 600 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGV 659
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
M D EY AFQ+VI+PIAYQFNP+LVL+SAG+DA V+DPLG KV+PE +A T+ L +
Sbjct: 660 QMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSS 719
Query: 547 LAQGRIILALEGGYNISSISY-AMTLCTKALLGDPLPLLESDLD--------INSSAVTS 597
LA GRII LEGGYN++SIS A +C L L + + I SS + +
Sbjct: 720 LAGGRIITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKT 779
Query: 598 IKETISSHKAYWSSLKFLVALPENKLLSAD 627
I+E + + YWS LK P N L D
Sbjct: 780 IREVCAVQQKYWSILKGFQVTPSNYGLDID 809
Score = 598 (215.6 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 107/247 (43%), Positives = 167/247 (67%)
Query: 368 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
+ + ++ E+++G A++RPPGHHA+ PCGFC+FNNV+ AA+ A + G R+LI+D D
Sbjct: 126 LTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLD 184
Query: 428 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 487
VHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G+N N+A N+ G
Sbjct: 185 VHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETG 244
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 547
+D +Y++ V+LP+A QF+P V++SAG+DA + DPLGG ++P+ Y+H + LK+L
Sbjct: 245 CTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSL 304
Query: 548 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKA 607
AQGR+++ LEGGYN + A+ C + LLG +E + S V S +S +
Sbjct: 305 AQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVSLVSVLRH 364
Query: 608 YWSSLKF 614
+W+ +
Sbjct: 365 HWNCFDY 371
Score = 396 (144.5 bits), Expect = 9.6e-34, P = 9.6e-34
Identities = 73/138 (52%), Positives = 96/138 (69%)
Query: 157 VDSVLNGESA--HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
VD + ++ + + I+RPPGHHA + GFCIFNNV+VAAKYA H RVLILDW
Sbjct: 540 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 599
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
DVHHGNGTQ +FY D V+Y+S+HR+D G+F+P + +VGEG GEG +VNV ++
Sbjct: 600 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGV 659
Query: 275 GMSDPEYIAAFQQVILPM 292
M D EY AFQ+VI+P+
Sbjct: 660 QMGDNEYQMAFQRVIMPI 677
Score = 390 (142.3 bits), Expect = 6.7e-102, Sum P(2) = 6.7e-102
Identities = 67/144 (46%), Positives = 103/144 (71%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+ + ++ E+++G A++RPPGHHA+ PCGFC+FNNV+ AA+ A + G R+LI+D D
Sbjct: 126 LTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLD 184
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G+N N+A N+ G
Sbjct: 185 VHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETG 244
Query: 276 MSDPEYIAAFQQVILPMYA-LDNH 298
+D +Y++ V+LP+ D H
Sbjct: 245 CTDSDYLSIIFHVLLPLATQFDPH 268
Score = 234 (87.4 bits), Expect = 6.7e-53, Sum P(2) = 6.7e-53
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + YA H RVLILDWDVHHGNGTQ +FY D V+Y+S+HR+D G+F+P
Sbjct: 575 FNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIG 634
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+ +VGEG GEG +VNV ++ V
Sbjct: 635 EPKDYSDVGEGAGEGMSVNVPFSGV 659
Score = 221 (82.9 bits), Expect = 4.6e-84, Sum P(2) = 4.6e-84
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 299 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 358
G R+LI+D DVHHG+GTQ +FY+D RVLY S+HR++HG F+PH ++ ++G GKG G
Sbjct: 174 GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLG 233
Query: 359 FNVNVAWNK 367
+N N+A N+
Sbjct: 234 YNANLALNE 242
Score = 164 (62.8 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 21 CGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLL 63
CGR++ EH+M+H +S+ HP+ALS ADLSVWCY C++YV N L
Sbjct: 897 CGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPAL 939
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 121/248 (48%), Positives = 180/248 (72%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VDSV++G+ +G+A++RPPGHH++++ GFC+FNNV++AA+YA +GL R+LI+DW
Sbjct: 114 QLVDSVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEYAKLKYGLQRILIVDW 173
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ +F D VLY S HRY+H F+P K++ VG GKG+GFN+N+ WNK
Sbjct: 174 DVHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKV 233
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF V+LP+A++F+PELVLVS+GYD+ + DP G +PE +AH TH+L
Sbjct: 234 GMGNSDYLAAFFHVLLPVAFEFDPELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQ 293
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA G++ + LEGGY++ S+S ++ + K LL DPLP + ++ SA+ SI+ ++HK
Sbjct: 294 LAHGKLCVILEGGYHLKSLSESVCMTVKTLLRDPLPQVTGEMAPCLSAIESIQNVRAAHK 353
Query: 607 AYWSSLKF 614
YW L +
Sbjct: 354 PYWKWLTY 361
Score = 428 (155.7 bits), Expect = 5.1e-42, Sum P(2) = 5.1e-42
Identities = 73/137 (53%), Positives = 105/137 (76%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VDSV++G+ +G+A++RPPGHH++++ GFC+FNNV++AA+YA +GL R+LI+DWD
Sbjct: 115 LVDSVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEYAKLKYGLQRILIVDWD 174
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG GTQ +F D VLY S HRY+H F+P K++ VG GKG+GFN+N+ WNK G
Sbjct: 175 VHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKVG 234
Query: 276 MSDPEYIAAFQQVILPM 292
M + +Y+AAF V+LP+
Sbjct: 235 MGNSDYLAAFFHVLLPV 251
Score = 241 (89.9 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 46/85 (54%), Positives = 57/85 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I YA +GL R+LI+DWDVHHG GTQ +F D VLY S HRY+H F+P
Sbjct: 149 FNNVAIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSL 208
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
K++ VG GKG+GFN+N+ WNKV
Sbjct: 209 KESDYDAVGLGKGKGFNINLPWNKV 233
Score = 66 (28.3 bits), Expect = 5.1e-42, Sum P(2) = 5.1e-42
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 483 WNK-KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFT 541
W + K ++ +A ILP+AY + P L++++ G N LG +S
Sbjct: 549 WKELKDADGNDFFSAVLGFILPVAYSYQPNLIVIAVG----PNRSLGISGISL-----LF 599
Query: 542 HWLKALAQGRIILALE 557
L+ LA+ RI+ +E
Sbjct: 600 GLLQGLAESRILAVIE 615
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 118/247 (47%), Positives = 180/247 (72%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL G +G+A++RPPGHH+++ GFC+FNNV++AA++A HGL R+LI+DW
Sbjct: 112 QLVDAVLMGAVHNGLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDW 171
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q +F +DP VLY S HRY+HG F+P+ +++ VG+GKG GF VN+ WN+
Sbjct: 172 DVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQV 231
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE + H T L+
Sbjct: 232 GMGNADYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQV 291
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA GR+ LEGGY++ S+S ++ + +ALLGDP+P L ++ + SA+ SI+ ++
Sbjct: 292 LAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGPMEPHRSALESIQSVRAAQA 351
Query: 607 AYWSSLK 613
+W+SL+
Sbjct: 352 PHWTSLQ 358
Score = 432 (157.1 bits), Expect = 9.0e-42, Sum P(2) = 9.0e-42
Identities = 72/137 (52%), Positives = 104/137 (75%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL G +G+A++RPPGHH+++ GFC+FNNV++AA++A HGL R+LI+DWD
Sbjct: 113 LVDAVLMGAVHNGLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWD 172
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG G Q +F +DP VLY S HRY+HG F+P+ +++ VG+GKG GF VN+ WN+ G
Sbjct: 173 VHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVG 232
Query: 276 MSDPEYIAAFQQVILPM 292
M + +Y+AAF V+LP+
Sbjct: 233 MGNADYLAAFLHVLLPV 249
Score = 254 (94.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A HGL R+LI+DWDVHHG G Q +F +DP VLY S HRY+HG F+P+
Sbjct: 147 FNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYL 206
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+++ VG+GKG GF VN+ WN+V
Sbjct: 207 RESDADAVGQGKGRGFTVNLPWNQV 231
Score = 66 (28.3 bits), Expect = 9.0e-42, Sum P(2) = 9.0e-42
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
+++ ++LP+AY F P+LVL+ G P G + P A A L+ A GR+
Sbjct: 556 FLSCVLALVLPLAYGFRPDLVLMVLG-------PAQGLQ-EPHA-ALLAALLRGPAGGRV 606
Query: 553 ILALEGGYNISSISYAMTLCTKALLGDPLPLL 584
++ +E S + + L GD P L
Sbjct: 607 LVLVEQ----EPTSQLAGILARVLHGDAPPSL 634
Score = 37 (18.1 bits), Expect = 1.0e-38, Sum P(2) = 1.0e-38
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 548 AQGRIILALEGGYNISSISYAMTLCTKALLG 578
A GR L L GG + + +LLG
Sbjct: 373 ADGRTSLVLPGGPTFKAAEAQASAVLSSLLG 403
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 122/255 (47%), Positives = 175/255 (68%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VDSV+ E +G+A++RPPGHH+++ GFC+FNNV++AA YA N+ L+R+LI+DW
Sbjct: 167 QLVDSVMKREVRNGMALVRPPGHHSQRSAANGFCVFNNVAIAALYAKKNYNLNRILIVDW 226
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q F DP VLY S HRY+H SF+P+ ++ +VG+GKG GFN+N+ WNK
Sbjct: 227 DVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNKV 286
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM++ +Y+AAF V+LP+AY+F+PELV+VSAG+D+ + DP G PE +AH TH L
Sbjct: 287 GMTNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPEIFAHLTHLLMP 346
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA G++ + LEGGYN++S+ ++ +LLGDP P + SA+ SI+ +
Sbjct: 347 LAAGKMCVVLEGGYNLTSLGQSVCQTVHSLLGDPTPRISGLGTACDSALESIQNVRNVQS 406
Query: 607 AYWSSLKFLVALPEN 621
+YWSS K L N
Sbjct: 407 SYWSSFKHLAQSETN 421
Score = 433 (157.5 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 75/142 (52%), Positives = 106/142 (74%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VDSV+ E +G+A++RPPGHH+++ GFC+FNNV++AA YA N+ L+R+LI+DWD
Sbjct: 168 LVDSVMKREVRNGMALVRPPGHHSQRSAANGFCVFNNVAIAALYAKKNYNLNRILIVDWD 227
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG G Q F DP VLY S HRY+H SF+P+ ++ +VG+GKG GFN+N+ WNK G
Sbjct: 228 VHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNKVG 287
Query: 276 MSDPEYIAAFQQVILPM-YALD 296
M++ +Y+AAF V+LP+ Y D
Sbjct: 288 MTNSDYLAAFFHVLLPVAYEFD 309
Score = 255 (94.8 bits), Expect = 6.8e-24, Sum P(3) = 6.8e-24
Identities = 46/85 (54%), Positives = 60/85 (70%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +YA N+ L+R+LI+DWDVHHG G Q F DP VLY S HRY+H SF+P+
Sbjct: 202 FNNVAIAALYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNL 261
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
++ +VG+GKG GFN+N+ WNKV
Sbjct: 262 PESDYSSVGKGKGSGFNINLPWNKV 286
Score = 87 (35.7 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
++ A +ILP+AY+FNP LVL G A + + H T ++ LA+GR
Sbjct: 614 FMQALLGLILPVAYEFNPALVLGIVGETAAKTGLM-------TVWGHMTCLIQGLARGRT 666
Query: 553 ILALEGGYNISSISYAMTLCTKALLGDPL-PL 583
+ L+G Y+ + ++ + A + PL PL
Sbjct: 667 LTLLQG-YDKDLLELTVSALSGASIS-PLGPL 696
Score = 55 (24.4 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 394 DEPCGFCIF-NNVSVAAKYALDNHGLS----RVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
DE C C+ +++SV+ + AL H L+ RVL+ V+ G+G + ND +V +
Sbjct: 532 DEVCNGCVVVSDLSVSVQCALQ-HALTEPAERVLV----VYVGDGELPVKTNDGKVFLVQ 586
Query: 449 V 449
+
Sbjct: 587 I 587
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 120/253 (47%), Positives = 178/253 (70%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL G +G+A++RPPGHH+++ GFC+FNNV++AAK+A HGL R+LI+DW
Sbjct: 112 QLVDAVLTGAVRNGLALVRPPGHHSQRATANGFCVFNNVAIAAKHAQQKHGLRRILIVDW 171
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q +F +DP VLY S HRY+HG F+P +++ VG G+G GF VN+ WN+
Sbjct: 172 DVHHGQGIQYIFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQV 231
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G +PE +AH TH L+
Sbjct: 232 GMGNADYVAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECFAHLTHLLQV 291
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA GR+ LEGGY++ S+S ++ + +ALLGDP L ++ + SA+ S++ ++
Sbjct: 292 LAGGRVCAVLEGGYHLESLSQSVCMMVRALLGDPALPLSGPMEPHGSALESLQCVRAAQA 351
Query: 607 AYWSSLKFLVALP 619
+W SL+ A P
Sbjct: 352 PHWVSLQQQGAAP 364
Score = 426 (155.0 bits), Expect = 1.8e-42, Sum P(3) = 1.8e-42
Identities = 72/137 (52%), Positives = 102/137 (74%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL G +G+A++RPPGHH+++ GFC+FNNV++AAK+A HGL R+LI+DWD
Sbjct: 113 LVDAVLTGAVRNGLALVRPPGHHSQRATANGFCVFNNVAIAAKHAQQKHGLRRILIVDWD 172
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG G Q +F +DP VLY S HRY+HG F+P +++ VG G+G GF VN+ WN+ G
Sbjct: 173 VHHGQGIQYIFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQVG 232
Query: 276 MSDPEYIAAFQQVILPM 292
M + +Y+AAF V+LP+
Sbjct: 233 MGNADYVAAFLHVLLPL 249
Score = 240 (89.5 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A HGL R+LI+DWDVHHG G Q +F +DP VLY S HRY+HG F+P
Sbjct: 147 FNNVAIAAKHAQQKHGLRRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHFWPCL 206
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+++ VG G+G GF VN+ WN+V
Sbjct: 207 RESDADAVGRGRGLGFTVNLPWNQV 231
Score = 71 (30.1 bits), Expect = 1.8e-42, Sum P(3) = 1.8e-42
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
+++ ++LP+AY F P+LVLV+ G P G + P+A A L+ A GR+
Sbjct: 558 FLSCALALVLPLAYSFQPDLVLVALG-------PAHGLR-DPQA-ALLAALLRGPAGGRV 608
Query: 553 ILALEGGYNISSISYAMTLCTKALLGDPLPLL 584
++ S T+ + L G+ P L
Sbjct: 609 FALVDE----ESTPQLATVLARVLNGEAPPSL 636
Score = 41 (19.5 bits), Expect = 1.8e-42, Sum P(3) = 1.8e-42
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 368 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVL 422
++D +L+G+ + G+A P A D VA +Y L +HG R+L
Sbjct: 469 LLDRILDGQVSSGMAATPVPAAAATLD------------VAVRYGL-SHGAQRLL 510
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 117/247 (47%), Positives = 177/247 (71%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+V+ G +G+A++RPPGHH+++ GFC+FN+V++AAK+A HGL R+LI+DW
Sbjct: 114 QLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDW 173
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
D+HHG GTQ +F +DP VLY S HRY+HG F+P+ +++ VG G+G GF VN+ WN+
Sbjct: 174 DIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQV 233
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF QV+LP+A++FN ELVLVSAG+D+ + D G + +PE +AH T L+
Sbjct: 234 GMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQV 293
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA GR+ LEGGY++ S+S ++ + +ALLGDP P L + + SA+ SI+ ++
Sbjct: 294 LAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQA 353
Query: 607 AYWSSLK 613
+W SL+
Sbjct: 354 PHWMSLR 360
Score = 431 (156.8 bits), Expect = 2.1e-44, Sum P(3) = 2.1e-44
Identities = 71/137 (51%), Positives = 105/137 (76%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+V+ G +G+A++RPPGHH+++ GFC+FN+V++AAK+A HGL R+LI+DWD
Sbjct: 115 LVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWD 174
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
+HHG GTQ +F +DP VLY S HRY+HG F+P+ +++ VG G+G GF VN+ WN+ G
Sbjct: 175 IHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVG 234
Query: 276 MSDPEYIAAFQQVILPM 292
M + +Y+AAF QV+LP+
Sbjct: 235 MGNADYMAAFLQVLLPL 251
Score = 252 (93.8 bits), Expect = 7.0e-22, Sum P(3) = 7.0e-22
Identities = 44/85 (51%), Positives = 59/85 (69%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A HGL R+LI+DWD+HHG GTQ +F +DP VLY S HRY+HG F+P+
Sbjct: 149 FNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYL 208
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+++ VG G+G GF VN+ WN+V
Sbjct: 209 RESDADTVGRGRGLGFTVNLPWNQV 233
Score = 86 (35.3 bits), Expect = 2.1e-44, Sum P(3) = 2.1e-44
Identities = 25/87 (28%), Positives = 38/87 (43%)
Query: 443 RVLYISVHRYDHGSFFPHSKDAG---PHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQ 499
R+L ++V + D D G P +G G V W G +++
Sbjct: 511 RLLCVAVGQLDRPPHLTDDGDCGYVCPPEIGRWGGLSGRRGVPWTTGG-----FLSCVLA 565
Query: 500 VILPIAYQFNPELVLVSAGYDACVNDP 526
++LP+AY F P+LVLV G + DP
Sbjct: 566 LVLPLAYSFQPDLVLVVLGPAHGLQDP 592
Score = 38 (18.4 bits), Expect = 2.1e-44, Sum P(3) = 2.1e-44
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 368 VVDSVLNGESAHGVAIIRPPGHHAEQDEP--CG 398
++D +L+G+ + G+A P A D CG
Sbjct: 472 LLDRILDGQVSSGIAATPGPAVAATLDVAIRCG 504
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 117/247 (47%), Positives = 177/247 (71%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+V+ G +G+A++RPPGHH+++ GFC+FN+V++AAK+A HGL R+LI+DW
Sbjct: 112 QLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDW 171
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
D+HHG GTQ +F +DP VLY S HRY+HG F+P+ +++ VG G+G GF VN+ WN+
Sbjct: 172 DIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQV 231
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF QV+LP+A++FN ELVLVSAG+D+ + D G + +PE +AH T L+
Sbjct: 232 GMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQV 291
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA GR+ LEGGY++ S+S ++ + +ALLGDP P L + + SA+ SI+ ++
Sbjct: 292 LAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQA 351
Query: 607 AYWSSLK 613
+W SL+
Sbjct: 352 PHWMSLR 358
Score = 431 (156.8 bits), Expect = 3.7e-43, Sum P(3) = 3.7e-43
Identities = 71/137 (51%), Positives = 105/137 (76%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+V+ G +G+A++RPPGHH+++ GFC+FN+V++AAK+A HGL R+LI+DWD
Sbjct: 113 LVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWD 172
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
+HHG GTQ +F +DP VLY S HRY+HG F+P+ +++ VG G+G GF VN+ WN+ G
Sbjct: 173 IHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVG 232
Query: 276 MSDPEYIAAFQQVILPM 292
M + +Y+AAF QV+LP+
Sbjct: 233 MGNADYMAAFLQVLLPL 249
Score = 252 (93.8 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 44/85 (51%), Positives = 59/85 (69%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A HGL R+LI+DWD+HHG GTQ +F +DP VLY S HRY+HG F+P+
Sbjct: 147 FNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYL 206
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+++ VG G+G GF VN+ WN+V
Sbjct: 207 RESDADTVGRGRGLGFTVNLPWNQV 231
Score = 74 (31.1 bits), Expect = 3.7e-43, Sum P(3) = 3.7e-43
Identities = 29/91 (31%), Positives = 45/91 (49%)
Query: 443 RVLYISVHRYDHGSFFPHSKDAGPH---NVGEGKGEG----FNVNVAWNKKGMSDPEYIA 495
R+L ++V + D PH D G NVG GK F+V+V + + +++
Sbjct: 509 RLLCVAVGQLDRP---PHLTDDGGTLWLNVG-GKEAAALSMFHVSVPLPR---TTGGFLS 561
Query: 496 AFQQVILPIAYQFNPELVLVSAGYDACVNDP 526
++LP+AY F P+LVLV G + DP
Sbjct: 562 CVLALVLPLAYSFQPDLVLVVLGPAHGLQDP 592
Score = 38 (18.4 bits), Expect = 3.7e-43, Sum P(3) = 3.7e-43
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 368 VVDSVLNGESAHGVAIIRPPGHHAEQDEP--CG 398
++D +L+G+ + G+A P A D CG
Sbjct: 470 LLDRILDGQVSSGIAATPGPAVAATLDVAIRCG 502
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 114/239 (47%), Positives = 173/239 (72%)
Query: 375 GESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGT 434
G +G+A++RPPGHH+++ GFC+FNNV++AA++A HGL R+LI+DWDVHHG G
Sbjct: 2 GAVHNGLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGI 61
Query: 435 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYI 494
Q +F +DP VLY S HRY+HG F+P+ +++ VG+GKG GF VN+ WN+ GM + +Y+
Sbjct: 62 QYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYL 121
Query: 495 AAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIIL 554
AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE + H T L+ LA GR+
Sbjct: 122 AAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLAGGRVCA 181
Query: 555 ALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAYWSSLK 613
LEGGY++ S+S ++ + +ALLGDP+P L ++ + SA+ SI+ ++ +W+SL+
Sbjct: 182 VLEGGYHLESLSQSVCMVVRALLGDPVPPLSGPMEPHRSALESIQSVRAAQAPHWTSLQ 240
Score = 414 (150.8 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 68/130 (52%), Positives = 98/130 (75%)
Query: 163 GESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGT 222
G +G+A++RPPGHH+++ GFC+FNNV++AA++A HGL R+LI+DWDVHHG G
Sbjct: 2 GAVHNGLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGI 61
Query: 223 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYI 282
Q +F +DP VLY S HRY+HG F+P+ +++ VG+GKG GF VN+ WN+ GM + +Y+
Sbjct: 62 QYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYL 121
Query: 283 AAFQQVILPM 292
AAF V+LP+
Sbjct: 122 AAFLHVLLPV 131
Score = 254 (94.5 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A HGL R+LI+DWDVHHG G Q +F +DP VLY S HRY+HG F+P+
Sbjct: 29 FNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYL 88
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+++ VG+GKG GF VN+ WN+V
Sbjct: 89 RESDADAVGQGKGRGFTVNLPWNQV 113
Score = 66 (28.3 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
+++ ++LP+AY F P+LVL+ G P G + P A A L+ A GR+
Sbjct: 438 FLSCVLALVLPLAYGFRPDLVLMVLG-------PAQGLQ-EPHA-ALLAALLRGPAGGRV 488
Query: 553 ILALEGGYNISSISYAMTLCTKALLGDPLPLL 584
++ +E S + + L GD P L
Sbjct: 489 LVLVEQ----EPTSQLAGILARVLHGDAPPSL 516
Score = 37 (18.1 bits), Expect = 2.9e-40, Sum P(2) = 2.9e-40
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 548 AQGRIILALEGGYNISSISYAMTLCTKALLG 578
A GR L L GG + + +LLG
Sbjct: 255 ADGRTSLVLPGGPTFKAAEAQASAVLSSLLG 285
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 121/251 (48%), Positives = 179/251 (71%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL G +G+A++RPPGHH+++ GFC+FNNV++AAK+A +GL R+LI+DW
Sbjct: 112 QLVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILIVDW 171
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q +F +DP VLY S HRY+HGSF+P ++ VG+G+G+GF VN+ WN+
Sbjct: 172 DVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQV 231
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE +AH T L+
Sbjct: 232 GMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQV 291
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA GRI LEGGY++ S++ ++ + + LLGDP P L + SA+ SI+ ++
Sbjct: 292 LAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQSVQTAQT 351
Query: 607 AYWSSLKFLVA 617
YW+SL+ VA
Sbjct: 352 PYWTSLQQNVA 362
Score = 427 (155.4 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 72/137 (52%), Positives = 104/137 (75%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL G +G+A++RPPGHH+++ GFC+FNNV++AAK+A +GL R+LI+DWD
Sbjct: 113 LVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILIVDWD 172
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG G Q +F +DP VLY S HRY+HGSF+P ++ VG+G+G+GF VN+ WN+ G
Sbjct: 173 VHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQVG 232
Query: 276 MSDPEYIAAFQQVILPM 292
M + +Y+AAF V+LP+
Sbjct: 233 MGNADYLAAFLHVLLPL 249
Score = 245 (91.3 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 44/85 (51%), Positives = 59/85 (69%)
Query: 285 FQQVILPM-YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V L +A +GL R+LI+DWDVHHG G Q +F +DP VLY S HRY+HGSF+P
Sbjct: 147 FNNVALAAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFL 206
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
++ VG+G+G+GF VN+ WN+V
Sbjct: 207 PESDADAVGQGQGQGFTVNLPWNQV 231
Score = 62 (26.9 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
+++ ++LP+AY F P++VL++ G P G + + +A A L++ GRI
Sbjct: 553 FLSLILGLVLPLAYGFQPDMVLMALG-------PAHGLQ-NAQA-ALLAAMLRSPVGGRI 603
Query: 553 ILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAYWSSL 612
+ +E SI +AL G+ P L + ++ + +A W L
Sbjct: 604 LAVVEE----ESIRLLARSLAQALHGETPPSLGPFSKATPEEIQALMFLKARLEARWKLL 659
Query: 613 KFLVALP 619
+ VA P
Sbjct: 660 Q--VAAP 664
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 114/247 (46%), Positives = 172/247 (69%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL G +G+A++RPPGHH ++ GFC+FNNV++AA +A HGL R+L++DW
Sbjct: 112 QLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDW 171
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q +F +DP VLY S HRY+HG F+P +++ VG G+G GF VN+ WN+
Sbjct: 172 DVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQV 231
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF ++LP+A++F+PELVLVSAG+D+ + DP G + +PE +AH T L+
Sbjct: 232 GMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQV 291
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHK 606
LA GR+ LEGGY++ S++ ++ + + LLGDP P L + SA+ SI+ ++
Sbjct: 292 LAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQA 351
Query: 607 AYWSSLK 613
+W SL+
Sbjct: 352 PHWKSLQ 358
Score = 417 (151.9 bits), Expect = 7.6e-41, Sum P(2) = 7.6e-41
Identities = 69/137 (50%), Positives = 100/137 (72%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL G +G+A++RPPGHH ++ GFC+FNNV++AA +A HGL R+L++DWD
Sbjct: 113 LVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWD 172
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG G Q +F +DP VLY S HRY+HG F+P +++ VG G+G GF VN+ WN+ G
Sbjct: 173 VHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVG 232
Query: 276 MSDPEYIAAFQQVILPM 292
M + +Y+AAF ++LP+
Sbjct: 233 MGNADYVAAFLHLLLPL 249
Score = 241 (89.9 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 43/85 (50%), Positives = 57/85 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A HGL R+L++DWDVHHG G Q +F +DP VLY S HRY+HG F+P
Sbjct: 147 FNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFL 206
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+++ VG G+G GF VN+ WN+V
Sbjct: 207 RESDADAVGRGQGLGFTVNLPWNQV 231
Score = 77 (32.2 bits), Expect = 7.6e-41, Sum P(2) = 7.6e-41
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
+++ ++LP+AY F P+LVLV+ G P G + P A A L+ LA GR+
Sbjct: 555 FLSCILGLVLPLAYGFQPDLVLVALG-------PGHGLQ-GPHA-ALLAAMLRGLAGGRV 605
Query: 553 ILALE 557
+ LE
Sbjct: 606 LALLE 610
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 119/236 (50%), Positives = 159/236 (67%)
Query: 379 HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLS--RVLILDWDVHHGNGTQA 436
+ +A+IRPPGHHAE D+ GFC+FNNVSVAA+ GLS +++ILDWDVHHGNG Q
Sbjct: 257 NAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQQRLGLSCRKIMILDWDVHHGNGIQK 316
Query: 437 MFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAA 496
FY+DP VLYIS+H Y +GSF+P KD G G GEG NVN+ W +GM D +YI A
Sbjct: 317 AFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPWPSQGMGDGDYIYA 376
Query: 497 FQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILAL 556
F QV++PIA +F+P+LV++++G+DA D LGGC V+P YAH TH L LAQG++ + L
Sbjct: 377 FHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGCFVTPACYAHMTHMLMTLAQGKVAVCL 436
Query: 557 EGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAYWSSL 612
EGGYN SIS + TK L+G+P L + +A+++I+ S YW +
Sbjct: 437 EGGYNFRSISKSALAVTKTLMGNPPDRLSFTCP-SEAAISTIRRVSSIQSDYWKCM 491
Score = 410 (149.4 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 73/128 (57%), Positives = 92/128 (71%)
Query: 167 HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLS--RVLILDWDVHHGNGTQA 224
+ +A+IRPPGHHAE D+ GFC+FNNVSVAA+ GLS +++ILDWDVHHGNG Q
Sbjct: 257 NAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQQRLGLSCRKIMILDWDVHHGNGIQK 316
Query: 225 MFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAA 284
FY+DP VLYIS+H Y +GSF+P KD G G GEG NVN+ W +GM D +YI A
Sbjct: 317 AFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPWPSQGMGDGDYIYA 376
Query: 285 FQQVILPM 292
F QV++P+
Sbjct: 377 FHQVVMPI 384
Score = 226 (84.6 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 41/69 (59%), Positives = 49/69 (71%)
Query: 299 GLS--RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKG 356
GLS +++ILDWDVHHGNG Q FY+DP VLYIS+H Y +GSF+P KD G G G
Sbjct: 295 GLSCRKIMILDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAG 354
Query: 357 EGFNVNVAW 365
EG NVN+ W
Sbjct: 355 EGKNVNIPW 363
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 124/267 (46%), Positives = 174/267 (65%)
Query: 371 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG--LSRVLILDWDV 428
S+++G+ +G A+IRPPGHHAEQD GFCIFNNV +AAK + +VLILDWDV
Sbjct: 216 SIVSGQIKNGFAVIRPPGHHAEQDSAMGFCIFNNVPIAAKVCQAEYPEICQKVLILDWDV 275
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPH------SKDAGPHNVGEGKGEGFNVNVA 482
HHGNG Q +FY DP VLYIS+H Y +G F+P + D + G G G G N+N+
Sbjct: 276 HHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPENPMTADGSISSCGSGPGLGRNINIG 335
Query: 483 WNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTH 542
W+ +GM D EYIAAFQ++I+PIA++FNP+LV++SAG+DA D LGGC V+P YAH TH
Sbjct: 336 WDDQGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAGFDAAAGDQLGGCFVTPPCYAHMTH 395
Query: 543 WLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLE-SDLDINSSAVTSIKET 601
L +LA GR+ + LEGGYN+S+IS + + L+G+P P + + IN A + +
Sbjct: 396 MLMSLAHGRVAVCLEGGYNLSAISKSALAVARTLMGEPPPKMGMASPKINREAARLLAQV 455
Query: 602 ISSHKAYWSSLK-FLVALPENKLLSAD 627
+ YW ++ +V + E + L ++
Sbjct: 456 QAYQAPYWECMRPGVVDVEEEQRLGSE 482
Score = 399 (145.5 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 80/174 (45%), Positives = 107/174 (61%)
Query: 159 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG--LSRVLILDWDV 216
S+++G+ +G A+IRPPGHHAEQD GFCIFNNV +AAK + +VLILDWDV
Sbjct: 216 SIVSGQIKNGFAVIRPPGHHAEQDSAMGFCIFNNVPIAAKVCQAEYPEICQKVLILDWDV 275
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPH------SKDAGPHNVGEGKGEGFNVNVA 270
HHGNG Q +FY DP VLYIS+H Y +G F+P + D + G G G G N+N+
Sbjct: 276 HHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPENPMTADGSISSCGSGPGLGRNINIG 335
Query: 271 WNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDP 324
W+ +GM D EYIAAFQ++I+P+ N L ++ +D G+ F P
Sbjct: 336 WDDQGMGDGEYIAAFQKIIMPIAHEFNPDLV-IISAGFDAAAGDQLGGCFVTPP 388
Score = 198 (74.8 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 44/100 (44%), Positives = 56/100 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPH------SKDAGPHNVGEGK 355
+VLILDWDVHHGNG Q +FY DP VLYIS+H Y +G F+P + D + G G
Sbjct: 267 KVLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPENPMTADGSISSCGSGP 326
Query: 356 GEGFNVNVAWNKVVDSVLNGES-AHGVAIIRPPGHHAEQD 394
G G N+N+ W+ + +GE A II P H D
Sbjct: 327 GLGRNINIGWDD--QGMGDGEYIAAFQKIIMPIAHEFNPD 364
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 113/245 (46%), Positives = 166/245 (67%)
Query: 371 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLILDWDV 428
+V+ G + +AI+RPPGHHAE + P GFC+F+NV+VAAK L N+ + R++I+DWD+
Sbjct: 248 AVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVDWDI 307
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHGNGTQ FYNDPRVLYIS+HR+++G F+P +K + VGEG GEGF +N+ W GM
Sbjct: 308 HHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRSSGM 367
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
D +Y+ AF ++I P+ +F+P+L++VS+G+DA D +G C V+P Y + TH LK +A
Sbjct: 368 HDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLKGIA 427
Query: 549 QGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAY 608
+G++ + LEGGYN+ SIS + K L+G+P P L + A+ + E I Y
Sbjct: 428 RGKLAVILEGGYNLDSISKSALAVAKVLVGEP-PENTITLRPQAEAIEVVDEVIKIQSKY 486
Query: 609 WSSLK 613
+ SL+
Sbjct: 487 FKSLR 491
Score = 429 (156.1 bits), Expect = 9.6e-38, P = 9.6e-38
Identities = 72/136 (52%), Positives = 101/136 (74%)
Query: 159 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLILDWDV 216
+V+ G + +AI+RPPGHHAE + P GFC+F+NV+VAAK L N+ + R++I+DWD+
Sbjct: 248 AVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVDWDI 307
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQ FYNDPRVLYIS+HR+++G F+P +K + VGEG GEGF +N+ W GM
Sbjct: 308 HHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRSSGM 367
Query: 277 SDPEYIAAFQQVILPM 292
D +Y+ AF ++I P+
Sbjct: 368 HDGDYVYAFNKIIQPV 383
Score = 248 (92.4 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 43/86 (50%), Positives = 61/86 (70%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R++I+DWD+HHGNGTQ FYNDPRVLYIS+HR+++G F+P +K + VGEG GEGF +
Sbjct: 299 RIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTI 358
Query: 362 NVAWNKVVDSVLNGESAHGV-AIIRP 386
N+ W + +G+ + II+P
Sbjct: 359 NIPWRS--SGMHDGDYVYAFNKIIQP 382
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 113/245 (46%), Positives = 166/245 (67%)
Query: 371 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLILDWDV 428
+V+ G + +AI+RPPGHHAE + P GFC+F+NV+VAAK L N+ + R++I+DWD+
Sbjct: 248 AVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVDWDI 307
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHGNGTQ FYNDPRVLYIS+HR+++G F+P +K + VGEG GEGF +N+ W GM
Sbjct: 308 HHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRSSGM 367
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
D +Y+ AF ++I P+ +F+P+L++VS+G+DA D +G C V+P Y + TH LK +A
Sbjct: 368 HDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLKGIA 427
Query: 549 QGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAY 608
+G++ + LEGGYN+ SIS + K L+G+P P L + A+ + E I Y
Sbjct: 428 RGKLAVILEGGYNLDSISKSALAVAKVLVGEP-PENTITLRPQAEAIEVVDEVIKIQSKY 486
Query: 609 WSSLK 613
+ SL+
Sbjct: 487 FKSLR 491
Score = 429 (156.1 bits), Expect = 9.6e-38, P = 9.6e-38
Identities = 72/136 (52%), Positives = 101/136 (74%)
Query: 159 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLILDWDV 216
+V+ G + +AI+RPPGHHAE + P GFC+F+NV+VAAK L N+ + R++I+DWD+
Sbjct: 248 AVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVDWDI 307
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQ FYNDPRVLYIS+HR+++G F+P +K + VGEG GEGF +N+ W GM
Sbjct: 308 HHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRSSGM 367
Query: 277 SDPEYIAAFQQVILPM 292
D +Y+ AF ++I P+
Sbjct: 368 HDGDYVYAFNKIIQPV 383
Score = 248 (92.4 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 43/86 (50%), Positives = 61/86 (70%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R++I+DWD+HHGNGTQ FYNDPRVLYIS+HR+++G F+P +K + VGEG GEGF +
Sbjct: 299 RIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTI 358
Query: 362 NVAWNKVVDSVLNGESAHGV-AIIRP 386
N+ W + +G+ + II+P
Sbjct: 359 NIPWRS--SGMHDGDYVYAFNKIIQP 382
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 119/261 (45%), Positives = 167/261 (63%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH---GLSRVLI 423
KV + V GE G AI+RPPGHHAE DE GFC+FNNV+VAA + L+ + ++LI
Sbjct: 168 KVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILI 227
Query: 424 LDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 483
+DWD+HHGNGTQ MF+ D RVL SVHR+DHGSF+P D + VGEG GEGFN+NV W
Sbjct: 228 VDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPW 287
Query: 484 NKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHW 543
+ G D +Y+A + +++P+ +F P+++L+SAG+DA + DPLGGC V+P Y+
Sbjct: 288 EQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKK 347
Query: 544 LKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESD---LDINSSAVTSIKE 600
L A G+I+LALEGGYN+ S+ + C + LL D S+ L+ + +++E
Sbjct: 348 LMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLESTRRVIQAVRE 407
Query: 601 TISSHKAYWSSLKFLVALPEN 621
+ + YW SL +A EN
Sbjct: 408 RLCT---YWPSLDASMASNEN 425
Score = 426 (155.0 bits), Expect = 9.0e-38, P = 9.0e-38
Identities = 74/140 (52%), Positives = 98/140 (70%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH---GLSRVLIL 212
V + V GE G AI+RPPGHHAE DE GFC+FNNV+VAA + L+ + ++LI+
Sbjct: 169 VAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIV 228
Query: 213 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 272
DWD+HHGNGTQ MF+ D RVL SVHR+DHGSF+P D + VGEG GEGFN+NV W
Sbjct: 229 DWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWE 288
Query: 273 KKGMSDPEYIAAFQQVILPM 292
+ G D +Y+A + +++P+
Sbjct: 289 QGGCGDADYLAVWNHILIPV 308
Score = 248 (92.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ ++LI+DWD+HHGNGTQ MF+ D RVL SVHR+DHGSF+P D + VGEG GEGF
Sbjct: 222 VKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGF 281
Query: 360 NVNVAWNK 367
N+NV W +
Sbjct: 282 NINVPWEQ 289
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 127/274 (46%), Positives = 177/274 (64%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++ V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D
Sbjct: 188 ELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDL 247
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+NVN+AW
Sbjct: 248 DVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGVGLGEGYNVNIAWTGG 305
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVND--PLGGCKVSPEA--YAH 539
M D EY+ AF+ V++P+A +F+P++VLVSAG+DA PLGG KV+ + + H
Sbjct: 306 LDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCNGFGH 365
Query: 540 FTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDL---DINSSAVT 596
T L LA GR+ LALEGG+++++I A C ALLG+ LE D+ +N++A
Sbjct: 366 LTKQLMTLANGRVALALEGGHDLTAICDASEACINALLGNEPGSLEEDVLHQSVNTNAAA 425
Query: 597 SIKETISSHKAYWSSLKFLVALPENKLLSADYAQ 630
S+++TI YW S+K +VA+ L A Q
Sbjct: 426 SLQKTIEIQSKYWKSIK-MVAVARGCALPASQLQ 458
Score = 407 (148.3 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 73/140 (52%), Positives = 97/140 (69%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+ V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D D
Sbjct: 189 LASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLD 248
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+NVN+AW
Sbjct: 249 VHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGVGLGEGYNVNIAWTGGL 306
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D EY+ AF+ V++P+
Sbjct: 307 DPPMGDVEYLEAFRTVVMPV 326
Score = 250 (93.1 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 48/87 (55%), Positives = 59/87 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I Y D +S++LI+D DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S
Sbjct: 223 FNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS 282
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKVVD 370
P+ VG G GEG+NVN+AW +D
Sbjct: 283 --GAPNEVGVGLGEGYNVNIAWTGGLD 307
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 637 (229.3 bits), Expect = 1.4e-61, P = 1.4e-61
Identities = 126/272 (46%), Positives = 176/272 (64%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++ V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D
Sbjct: 762 ELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDL 821
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW
Sbjct: 822 DVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGG 879
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVND--PLGGCKVSPEAYAHFT 541
M D EY+ AF+ V+ P+A +F+P++VLVSAG+DA PLGG KV+ + + H T
Sbjct: 880 LDPPMGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLGGYKVTAKCFGHLT 939
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSI 598
L LA G ++LALEGG+++++I A C ALLG+ L PL E L N +AV S+
Sbjct: 940 KQLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQTPNMNAVISL 999
Query: 599 KETISSHKAYWSSLKFLVALPENKLLSADYAQ 630
++ I YW S++ +VA+P L+ Q
Sbjct: 1000 QKIIEIQSKYWKSVR-MVAVPRGCALAGTQLQ 1030
Score = 403 (146.9 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 72/140 (51%), Positives = 96/140 (68%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+ V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D D
Sbjct: 763 LASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLD 822
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW
Sbjct: 823 VHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGGL 880
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D EY+ AF+ V+ P+
Sbjct: 881 DPPMGDIEYLEAFRTVVTPV 900
Score = 250 (93.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 47/87 (54%), Positives = 59/87 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I Y D +S++LI+D DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S
Sbjct: 797 FNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS 856
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKVVD 370
P+ VG G GEG+N+N+AW +D
Sbjct: 857 --GAPNEVGTGLGEGYNINIAWTGGLD 881
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 634 (228.2 bits), Expect = 3.2e-61, P = 3.2e-61
Identities = 129/268 (48%), Positives = 176/268 (65%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S+ L++DW
Sbjct: 780 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKTLVVDW 839
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FY+DPRVLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 840 DVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGG 897
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T
Sbjct: 898 LDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT 957
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSI 598
L LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 958 KQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSM 1017
Query: 599 KETISSHKAYWSSLKFLVALPENKLLSA 626
++ I H YW SL+ L + L+ A
Sbjct: 1018 EKVIEIHSQYWRSLQRLASTAGYSLVEA 1045
Score = 411 (149.7 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 76/140 (54%), Positives = 98/140 (70%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S+ L++DWD
Sbjct: 781 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKTLVVDWD 840
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FY+DPRVLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 841 VHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGL 898
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D EY+AAF+ V++P+
Sbjct: 899 DPPMGDAEYLAAFRTVVMPI 918
Score = 246 (91.7 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 49/95 (51%), Positives = 60/95 (63%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S+ L++DWDVHHGNGTQ FY+DPRVLYIS+HRYD
Sbjct: 807 STPMGFCYFNSVAIAAKLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYD 866
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 867 DGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGLD 899
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 630 (226.8 bits), Expect = 7.7e-61, P = 7.7e-61
Identities = 126/255 (49%), Positives = 170/255 (66%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DW
Sbjct: 750 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDW 809
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 810 DVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGG 867
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M D EY+ AF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T
Sbjct: 868 LDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT 927
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLD--INSSAVTSI 598
L LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 928 KQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSM 987
Query: 599 KETISSHKAYWSSLK 613
++ I H YW SL+
Sbjct: 988 EKVIEIHSKYWHSLQ 1002
Score = 412 (150.1 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 83/171 (48%), Positives = 108/171 (63%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DWD
Sbjct: 751 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWD 810
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 811 VHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGL 868
Query: 273 KKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILD-WDVHHGNGTQAMFYN 322
M D EY+ AF+ V++P+ + VL+ +D G+ T YN
Sbjct: 869 DPPMGDTEYLTAFRTVVMPI--ANEFAPDVVLVSSGFDAVEGHPTPLGGYN 917
Score = 250 (93.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 50/95 (52%), Positives = 60/95 (63%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S++LI+DWDVHHGNGTQ FYNDP VLYIS+HRYD
Sbjct: 777 STPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYD 836
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 837 DGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGLD 869
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 630 (226.8 bits), Expect = 8.0e-61, P = 8.0e-61
Identities = 126/255 (49%), Positives = 170/255 (66%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DW
Sbjct: 758 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDW 817
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 818 DVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGG 875
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M D EY+ AF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T
Sbjct: 876 LDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT 935
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLD--INSSAVTSI 598
L LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 936 KQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSM 995
Query: 599 KETISSHKAYWSSLK 613
++ I H YW SL+
Sbjct: 996 EKVIEIHSKYWHSLQ 1010
Score = 412 (150.1 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 83/171 (48%), Positives = 108/171 (63%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DWD
Sbjct: 759 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWD 818
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 819 VHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGL 876
Query: 273 KKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILD-WDVHHGNGTQAMFYN 322
M D EY+ AF+ V++P+ + VL+ +D G+ T YN
Sbjct: 877 DPPMGDTEYLTAFRTVVMPI--ANEFAPDVVLVSSGFDAVEGHPTPLGGYN 925
Score = 250 (93.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 50/95 (52%), Positives = 60/95 (63%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S++LI+DWDVHHGNGTQ FYNDP VLYIS+HRYD
Sbjct: 785 STPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYD 844
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 845 DGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGLD 877
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 630 (226.8 bits), Expect = 8.3e-61, P = 8.3e-61
Identities = 126/255 (49%), Positives = 170/255 (66%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DW
Sbjct: 767 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDW 826
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 827 DVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGG 884
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M D EY+ AF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T
Sbjct: 885 LDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT 944
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLD--INSSAVTSI 598
L LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 945 KQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSM 1004
Query: 599 KETISSHKAYWSSLK 613
++ I H YW SL+
Sbjct: 1005 EKVIEIHSKYWHSLQ 1019
Score = 412 (150.1 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 83/171 (48%), Positives = 108/171 (63%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DWD
Sbjct: 768 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWD 827
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 828 VHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGL 885
Query: 273 KKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILD-WDVHHGNGTQAMFYN 322
M D EY+ AF+ V++P+ + VL+ +D G+ T YN
Sbjct: 886 DPPMGDTEYLTAFRTVVMPI--ANEFAPDVVLVSSGFDAVEGHPTPLGGYN 934
Score = 250 (93.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 50/95 (52%), Positives = 60/95 (63%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S++LI+DWDVHHGNGTQ FYNDP VLYIS+HRYD
Sbjct: 794 STPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYD 853
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 854 DGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGLD 886
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 630 (226.8 bits), Expect = 8.7e-61, P = 8.7e-61
Identities = 126/255 (49%), Positives = 170/255 (66%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DW
Sbjct: 776 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDW 835
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 836 DVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGG 893
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M D EY+ AF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T
Sbjct: 894 LDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT 953
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLD--INSSAVTSI 598
L LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 954 KQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSM 1013
Query: 599 KETISSHKAYWSSLK 613
++ I H YW SL+
Sbjct: 1014 EKVIEIHSKYWHSLQ 1028
Score = 412 (150.1 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 83/171 (48%), Positives = 108/171 (63%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DWD
Sbjct: 777 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWD 836
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 837 VHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGL 894
Query: 273 KKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILD-WDVHHGNGTQAMFYN 322
M D EY+ AF+ V++P+ + VL+ +D G+ T YN
Sbjct: 895 DPPMGDTEYLTAFRTVVMPI--ANEFAPDVVLVSSGFDAVEGHPTPLGGYN 943
Score = 250 (93.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 50/95 (52%), Positives = 60/95 (63%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S++LI+DWDVHHGNGTQ FYNDP VLYIS+HRYD
Sbjct: 803 STPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYD 862
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 863 DGNFFPGS--GAPDEVGTGAGVGFNVNMAFTGGLD 895
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 628 (226.1 bits), Expect = 1.4e-60, P = 1.4e-60
Identities = 128/268 (47%), Positives = 177/268 (66%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V+VAAK +S++LI+DW
Sbjct: 772 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIVDW 831
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FYNDP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 832 DVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGG 889
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
+ M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T
Sbjct: 890 LEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT 949
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSI 598
L LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 950 KQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAVHSM 1009
Query: 599 KETISSHKAYWSSLKFLVALPENKLLSA 626
++ + H YW L+ L + + L+ A
Sbjct: 1010 EKVMDIHSKYWRCLQRLSSTVGHSLIEA 1037
Score = 416 (151.5 bits), Expect = 6.4e-36, P = 6.4e-36
Identities = 84/171 (49%), Positives = 110/171 (64%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V+VAAK +S++LI+DWD
Sbjct: 773 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIVDWD 832
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 833 VHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGL 890
Query: 273 KKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILD-WDVHHGNGTQAMFYN 322
+ M D EY+AAF+ V++P+ + VL+ +D G+ T YN
Sbjct: 891 EPPMGDAEYLAAFRTVVMPI--ANEFAPDVVLVSSGFDAVEGHPTPLGGYN 939
Score = 244 (91.0 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 48/90 (53%), Positives = 58/90 (64%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S++LI+DWDVHHGNGTQ FYNDP VLY+S+HRYD
Sbjct: 799 STPMGFCYFNSVAVAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYD 858
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 365
G+FFP S P VG G G GFNVN+A+
Sbjct: 859 DGNFFPGS--GAPDEVGTGPGVGFNVNMAF 886
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 127/268 (47%), Positives = 173/268 (64%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V+VAAK +S++LI+DW
Sbjct: 364 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDW 423
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 424 DVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGG 481
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + T
Sbjct: 482 LDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLT 541
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSI 598
L LA GRI+LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 542 KQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSM 601
Query: 599 KETISSHKAYWSSLKFLVALPENKLLSA 626
++ + H YW L+ + L+ A
Sbjct: 602 EKVMEIHSKYWRCLQRTTSTAGRSLIEA 629
Score = 407 (148.3 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 76/140 (54%), Positives = 98/140 (70%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V+VAAK +S++LI+DWD
Sbjct: 365 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWD 424
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 425 VHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGL 482
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D EY+AAF+ V++P+
Sbjct: 483 DPPMGDAEYLAAFRTVVMPI 502
Score = 240 (89.5 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 48/95 (50%), Positives = 60/95 (63%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S++LI+DWDVHHGNGTQ FY+DP VLY+S+HRYD
Sbjct: 391 STPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYD 450
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 451 DGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLD 483
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 625 (225.1 bits), Expect = 2.9e-60, P = 2.9e-60
Identities = 120/250 (48%), Positives = 166/250 (66%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V + E +G A++RPPGHHAE+ GFC FN++++ AKY D + ++LI+D DVHHG
Sbjct: 766 VASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDVHHG 825
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY DP +LY+S+HRYD G+FFP S P+ VG G GEGFN+N+AW M
Sbjct: 826 NGTQQAFYADPSILYVSLHRYDEGNFFPGS--GAPNEVGSGPGEGFNINIAWTGGLDPPM 883
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACV--NDPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ VI+P A +F+PE+VLVSAG+DA + PLGG KV+ + + H T L
Sbjct: 884 GDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQLLK 943
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDL--DI-NSSAVTSIKETIS 603
LA GR++LALEGG+++++I A C ALLG+ L L D+ I N +A+ S+K+T
Sbjct: 944 LADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQIPNMNAIASLKKTTE 1003
Query: 604 SHKAYWSSLK 613
YW S++
Sbjct: 1004 IQSKYWKSVE 1013
Score = 398 (145.2 bits), Expect = 7.2e-34, P = 7.2e-34
Identities = 70/135 (51%), Positives = 93/135 (68%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V + E +G A++RPPGHHAE+ GFC FN++++ AKY D + ++LI+D DVHHG
Sbjct: 766 VASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDVHHG 825
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY DP +LY+S+HRYD G+FFP S P+ VG G GEGFN+N+AW M
Sbjct: 826 NGTQQAFYADPSILYVSLHRYDEGNFFPGS--GAPNEVGSGPGEGFNINIAWTGGLDPPM 883
Query: 277 SDPEYIAAFQQVILP 291
D EY+ AF+ VI+P
Sbjct: 884 GDVEYLTAFRTVIMP 898
Score = 249 (92.7 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 44/82 (53%), Positives = 56/82 (68%)
Query: 289 ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 348
I Y D + ++LI+D DVHHGNGTQ FY DP +LY+S+HRYD G+FFP S P
Sbjct: 801 ITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGS--GAP 858
Query: 349 HNVGEGKGEGFNVNVAWNKVVD 370
+ VG G GEGFN+N+AW +D
Sbjct: 859 NEVGSGPGEGFNINIAWTGGLD 880
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 625 (225.1 bits), Expect = 3.0e-60, P = 3.0e-60
Identities = 128/268 (47%), Positives = 175/268 (65%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DW
Sbjct: 773 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDW 832
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FYNDP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 833 DVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGG 890
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T
Sbjct: 891 LDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT 950
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSI 598
L LA GRI+LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 951 KQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAVHSM 1010
Query: 599 KETISSHKAYWSSLKFLVALPENKLLSA 626
++ + H YW L+ L + L+ A
Sbjct: 1011 EKVMGIHSEYWRCLQRLSPTVGHSLIEA 1038
Score = 413 (150.4 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 83/171 (48%), Positives = 109/171 (63%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DWD
Sbjct: 774 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWD 833
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 834 VHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGL 891
Query: 273 KKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILD-WDVHHGNGTQAMFYN 322
M D EY+AAF+ V++P+ + VL+ +D G+ T YN
Sbjct: 892 DPPMGDAEYLAAFRTVVMPI--ANEFAPDVVLVSSGFDAVEGHPTPLGGYN 940
Score = 247 (92.0 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 49/95 (51%), Positives = 60/95 (63%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S++LI+DWDVHHGNGTQ FYNDP VLY+S+HRYD
Sbjct: 800 STPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYD 859
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 860 DGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLD 892
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 620 (223.3 bits), Expect = 1.1e-59, P = 1.1e-59
Identities = 127/268 (47%), Positives = 173/268 (64%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V+VAAK +S++LI+DW
Sbjct: 780 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDW 839
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 840 DVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGG 897
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + T
Sbjct: 898 LDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLT 957
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSI 598
L LA GRI+LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 958 KQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSM 1017
Query: 599 KETISSHKAYWSSLKFLVALPENKLLSA 626
++ + H YW L+ + L+ A
Sbjct: 1018 EKVMEIHSKYWRCLQRTTSTAGRSLIEA 1045
Score = 407 (148.3 bits), Expect = 7.0e-35, P = 7.0e-35
Identities = 76/140 (54%), Positives = 98/140 (70%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V+VAAK +S++LI+DWD
Sbjct: 781 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWD 840
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 841 VHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGL 898
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D EY+AAF+ V++P+
Sbjct: 899 DPPMGDAEYLAAFRTVVMPI 918
Score = 240 (89.5 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 48/95 (50%), Positives = 60/95 (63%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S++LI+DWDVHHGNGTQ FY+DP VLY+S+HRYD
Sbjct: 807 STPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYD 866
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 867 DGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLD 899
>UNIPROTKB|F1LSN5 [details] [associations]
symbol:F1LSN5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 IPI:IPI01016416
Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
Length = 932
Score = 614 (221.2 bits), Expect = 1.9e-59, P = 1.9e-59
Identities = 124/258 (48%), Positives = 167/258 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG-LSRVLILDWDVHH 430
V + E +G A++RPPGHHA+ GFC FN+V++A + L HG S++LI+DWDVHH
Sbjct: 633 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQ-LQQHGKASKILIVDWDVHH 691
Query: 431 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKG 487
GNGTQ FY DPRVLYIS+HR+D G+FFP S VG G GEGFNVNVAW
Sbjct: 692 GNGTQQTFYQDPRVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEGFNVNVAWAGGLDPP 749
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 545
M DPEY+AAF+ V++PIA +F P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 750 MGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLM 809
Query: 546 ALAQGRIILALEGGYNISSISYAMTLCTKALLG---DPLPLLESDLDINSSAVTSIKETI 602
+LA G ++LALEGG+++++I A C ALLG DPL N +A+ S++ +
Sbjct: 810 SLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQKPNLNAIRSLEAVV 869
Query: 603 SSHKAYWSSLKFLVALPE 620
H+ YW ++ L + P+
Sbjct: 870 RVHRKYWGCMQRLASCPD 887
Score = 401 (146.2 bits), Expect = 2.4e-34, P = 2.4e-34
Identities = 76/137 (55%), Positives = 96/137 (70%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG-LSRVLILDWDVHH 218
V + E +G A++RPPGHHA+ GFC FN+V++A + L HG S++LI+DWDVHH
Sbjct: 633 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQ-LQQHGKASKILIVDWDVHH 691
Query: 219 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKG 275
GNGTQ FY DPRVLYIS+HR+D G+FFP S VG G GEGFNVNVAW
Sbjct: 692 GNGTQQTFYQDPRVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEGFNVNVAWAGGLDPP 749
Query: 276 MSDPEYIAAFQQVILPM 292
M DPEY+AAF+ V++P+
Sbjct: 750 MGDPEYLAAFRIVVMPI 766
Score = 263 (97.6 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 50/82 (60%), Positives = 57/82 (69%)
Query: 285 FQQVILPMYALDNHG-LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + L HG S++LI+DWDVHHGNGTQ FY DPRVLYIS+HR+D G+FFP S
Sbjct: 663 FNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGS 722
Query: 344 KDAGPHNVGEGKGEGFNVNVAW 365
VG G GEGFNVNVAW
Sbjct: 723 --GAVDEVGTGSGEGFNVNVAW 742
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 112/245 (45%), Positives = 158/245 (64%)
Query: 371 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG--LSRVLILDWDV 428
+V+ G+ + A++RPPGHHAE +P GFC+FNNVSV A+ L + RVLI+DWD+
Sbjct: 176 AVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDI 235
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHGNGTQ FY+DP VLY+S+HRY++G F+P + N GEG G G VN+ W+ GM
Sbjct: 236 HHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGM 295
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
D +YI AFQ+V++P+AY+F+P+LV+VS G+DA D +G ++P AYAH T L LA
Sbjct: 296 GDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLA 355
Query: 549 QGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAY 608
G++ ++LEGGYN+ SIS + ++LLG P L + AV +I Y
Sbjct: 356 DGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGRLHTTYAC-PQAVATINHVTKIQSQY 414
Query: 609 WSSLK 613
W ++
Sbjct: 415 WRCMR 419
Score = 403 (146.9 bits), Expect = 5.2e-35, P = 5.2e-35
Identities = 72/141 (51%), Positives = 98/141 (69%)
Query: 159 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG--LSRVLILDWDV 216
+V+ G+ + A++RPPGHHAE +P GFC+FNNVSV A+ L + RVLI+DWD+
Sbjct: 176 AVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDI 235
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQ FY+DP VLY+S+HRY++G F+P + N GEG G G VN+ W+ GM
Sbjct: 236 HHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGM 295
Query: 277 SDPEYIAAFQQVILPM-YALD 296
D +YI AFQ+V++P+ Y D
Sbjct: 296 GDGDYIYAFQRVVMPVAYEFD 316
Score = 227 (85.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 43/104 (41%), Positives = 63/104 (60%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ RVLI+DWD+HHGNGTQ FY+DP VLY+S+HRY++G F+P + N GEG G G
Sbjct: 225 IKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGR 284
Query: 360 NVNVAWNKVVDSVLNGESAHGVA-IIRPPGHHAEQD---EPCGF 399
VN+ W+ + +G+ + ++ P + + D CGF
Sbjct: 285 TVNIPWSCA--GMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGF 326
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 614 (221.2 bits), Expect = 3.6e-59, P = 3.6e-59
Identities = 123/262 (46%), Positives = 175/262 (66%)
Query: 363 VAWNKVVD---SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLS 419
+A VVD V +GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S
Sbjct: 712 LAVGSVVDLVFKVASGELRNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVS 771
Query: 420 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 479
++LI+DWDVHHGNGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GFNV
Sbjct: 772 KILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGS--GAPDEVGIGPGVGFNV 829
Query: 480 NVAWN---KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSP 534
N+A+ + M D +Y+AAF V++PIA +F+P++VLVS+G+DA P LGG K++
Sbjct: 830 NMAFTGGLEPPMGDADYLAAFTSVVMPIANEFSPDVVLVSSGFDAVEGHPPPLGGYKLTA 889
Query: 535 EAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--N 591
+ + + T L LA GR++LALEGG+++++I A C ALLG+ L P+ E L N
Sbjct: 890 KCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELDPIPEDILQQRPN 949
Query: 592 SSAVTSIKETISSHKAYWSSLK 613
++A+ S+++ + YW SL+
Sbjct: 950 ANAIQSMEKVLEVQSKYWRSLQ 971
Score = 405 (147.6 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 74/140 (52%), Positives = 99/140 (70%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V +GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S++LI+DWD
Sbjct: 720 LVFKVASGELRNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWD 779
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 780 VHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGS--GAPDEVGIGPGVGFNVNMAFTGGL 837
Query: 273 KKGMSDPEYIAAFQQVILPM 292
+ M D +Y+AAF V++P+
Sbjct: 838 EPPMGDADYLAAFTSVVMPI 857
Score = 239 (89.2 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 47/90 (52%), Positives = 58/90 (64%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S++LI+DWDVHHGNGTQ FY+DP VLY+S+HRYD
Sbjct: 746 STPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYD 805
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 365
G+FFP S P VG G G GFNVN+A+
Sbjct: 806 DGNFFPGS--GAPDEVGIGPGVGFNVNMAF 833
>MGI|MGI:1891835 [details] [associations]
symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
"nervous system development" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=ISO] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=ISO]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
Length = 938
Score = 611 (220.1 bits), Expect = 4.3e-59, P = 4.3e-59
Identities = 125/261 (47%), Positives = 169/261 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG-LSRVLILDWDVHH 430
V + E +G A++RPPGHHA+ GFC FN+V++A + L HG S++LI+DWDVHH
Sbjct: 639 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQ-LQQHGKASKILIVDWDVHH 697
Query: 431 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKG 487
GNGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW
Sbjct: 698 GNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEGFNVNVAWAGGLDPP 755
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 545
M DPEY+AAF+ V++PIA +F P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 756 MGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLM 815
Query: 546 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETI 602
LA G ++LALEGG+++++I A C ALLG+ + PL E N SA+ S++ +
Sbjct: 816 NLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQKPNLSAIRSLEAVV 875
Query: 603 SSHKAYWSSLKFLVALPENKL 623
H+ YW ++ L + P++ L
Sbjct: 876 RVHRKYWGCMQRLASCPDSWL 896
Score = 395 (144.1 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 75/137 (54%), Positives = 95/137 (69%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG-LSRVLILDWDVHH 218
V + E +G A++RPPGHHA+ GFC FN+V++A + L HG S++LI+DWDVHH
Sbjct: 639 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQ-LQQHGKASKILIVDWDVHH 697
Query: 219 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKG 275
GNGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW
Sbjct: 698 GNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGTGSGEGFNVNVAWAGGLDPP 755
Query: 276 MSDPEYIAAFQQVILPM 292
M DPEY+AAF+ V++P+
Sbjct: 756 MGDPEYLAAFRIVVMPI 772
Score = 257 (95.5 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 49/82 (59%), Positives = 56/82 (68%)
Query: 285 FQQVILPMYALDNHG-LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + L HG S++LI+DWDVHHGNGTQ FY DP VLYIS+HR+D G+FFP S
Sbjct: 669 FNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS 728
Query: 344 KDAGPHNVGEGKGEGFNVNVAW 365
VG G GEGFNVNVAW
Sbjct: 729 --GAVDEVGTGSGEGFNVNVAW 748
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 107/246 (43%), Positives = 158/246 (64%)
Query: 371 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLILDWDV 428
+V+ G + +A++RPPGHHAE GFC+F+NV+VAAK L N+ + R++ILDWD+
Sbjct: 187 AVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDI 246
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHGNGTQ FY D +VLY+S+HR++ G ++P + GEGKGEGFN N+ W G+
Sbjct: 247 HHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITWPVGGV 306
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
D EY+ AF+QV++P+ +F P+LV++S+G+DA D +G C V+P Y H TH LK+LA
Sbjct: 307 GDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA 366
Query: 549 QGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDL-DINSSAVTSIKETISSHKA 607
+G + + LEGGYN+ +I+ + K L+G+P L L D + I + I
Sbjct: 367 RGNLCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLSDPKPEVIEMIDKVIRLQSK 426
Query: 608 YWSSLK 613
YW+ +
Sbjct: 427 YWNCFR 432
Score = 397 (144.8 bits), Expect = 2.9e-34, P = 2.9e-34
Identities = 68/136 (50%), Positives = 96/136 (70%)
Query: 159 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNH--GLSRVLILDWDV 216
+V+ G + +A++RPPGHHAE GFC+F+NV+VAAK L N+ + R++ILDWD+
Sbjct: 187 AVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDI 246
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQ FY D +VLY+S+HR++ G ++P + GEGKGEGFN N+ W G+
Sbjct: 247 HHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITWPVGGV 306
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+QV++PM
Sbjct: 307 GDAEYMWAFEQVVMPM 322
Score = 223 (83.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R++ILDWD+HHGNGTQ FY D +VLY+S+HR++ G ++P + GEGKGEGFN
Sbjct: 238 RIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNC 297
Query: 362 NVAW 365
N+ W
Sbjct: 298 NITW 301
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 611 (220.1 bits), Expect = 7.2e-59, P = 7.2e-59
Identities = 122/256 (47%), Positives = 168/256 (65%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++ V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D
Sbjct: 760 ELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDL 819
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW
Sbjct: 820 DVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGG 877
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVND--PLGGCKVSPEAYAHFT 541
M D EY+ AF+ ++ P+A +F+P++VLVSAG+DA PLGG KV+ + + H T
Sbjct: 878 LDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLT 937
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDL--DINSSAVTSI 598
L LA GR++LALEGG+++++I A C ALLG+ L PL E L N +AV S+
Sbjct: 938 KQLMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQSPNMNAVISL 997
Query: 599 KETISSHKAYWSSLKF 614
++ I SLKF
Sbjct: 998 QKIIEIQSM---SLKF 1010
Score = 402 (146.6 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 71/140 (50%), Positives = 96/140 (68%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+ V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D D
Sbjct: 761 LASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLD 820
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW
Sbjct: 821 VHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGGL 878
Query: 273 KKGMSDPEYIAAFQQVILPM 292
M D EY+ AF+ ++ P+
Sbjct: 879 DPPMGDVEYLEAFRTIVKPV 898
Score = 250 (93.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 47/87 (54%), Positives = 59/87 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I Y D +S++LI+D DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S
Sbjct: 795 FNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS 854
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKVVD 370
P+ VG G GEG+N+N+AW +D
Sbjct: 855 --GAPNEVGTGLGEGYNINIAWTGGLD 879
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 596 (214.9 bits), Expect = 7.4e-59, Sum P(2) = 7.4e-59
Identities = 115/260 (44%), Positives = 171/260 (65%)
Query: 368 VVDSVLN---GESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG-LSRVLI 423
V+D L G+ +G A++RPPGHHAE + GFC FN++++AAK + R+LI
Sbjct: 946 VIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMPEVRRILI 1005
Query: 424 LDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 483
+DWDVHHGNGTQ FY P +LY+S+HR+D G+FFP + GP G G G GFNVN++W
Sbjct: 1006 VDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAGLGFNVNISW 1063
Query: 484 N---KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYA 538
+ + D EYIAAF+ V++PIA FNP++VLVS+G+DA P LGG VSP +
Sbjct: 1064 SGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGGYHVSPACFG 1123
Query: 539 HFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDIN--SSAV 595
T L LA G+++LALEGGY++++I + C +ALLGDP P+ +++L+ +A+
Sbjct: 1124 FMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAELERPPCQNAI 1183
Query: 596 TSIKETISSHKAYWSSLKFL 615
++++TI+ + +W ++ L
Sbjct: 1184 NTLQKTIAIQQTHWPCVRML 1203
Score = 372 (136.0 bits), Expect = 8.0e-31, P = 8.0e-31
Identities = 69/144 (47%), Positives = 96/144 (66%)
Query: 156 VVDSVLN---GESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHG-LSRVLI 211
V+D L G+ +G A++RPPGHHAE + GFC FN++++AAK + R+LI
Sbjct: 946 VIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRMPEVRRILI 1005
Query: 212 LDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 271
+DWDVHHGNGTQ FY P +LY+S+HR+D G+FFP + GP G G G GFNVN++W
Sbjct: 1006 VDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAGLGFNVNISW 1063
Query: 272 N---KKGMSDPEYIAAFQQVILPM 292
+ + D EYIAAF+ V++P+
Sbjct: 1064 SGALNPPLGDAEYIAAFRTVVMPI 1087
Score = 233 (87.1 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 42/84 (50%), Positives = 59/84 (70%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R+LI+DWDVHHGNGTQ FY P +LY+S+HR+D G+FFP + GP G G G GFNV
Sbjct: 1002 RILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGT--GGPTECGSGAGLGFNV 1059
Query: 362 NVAWNKVVDSVLNGESAHGVAIIR 385
N++W+ ++ L G++ + +A R
Sbjct: 1060 NISWSGALNPPL-GDAEY-IAAFR 1081
Score = 47 (21.6 bits), Expect = 7.4e-59, Sum P(2) = 7.4e-59
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 238 HRYDHGSF-FPHSKDAGPHNVGEGKGEGFNV 267
H + HGS PH PH G G G G +
Sbjct: 518 HGHGHGSHAHPH-----PHAHGHGHGHGHGI 543
Score = 47 (21.6 bits), Expect = 7.4e-59, Sum P(2) = 7.4e-59
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 332 HRYDHGSF-FPHSKDAGPHNVGEGKGEGFNV 361
H + HGS PH PH G G G G +
Sbjct: 518 HGHGHGSHAHPH-----PHAHGHGHGHGHGI 543
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 611 (220.1 bits), Expect = 8.8e-59, P = 8.8e-59
Identities = 124/263 (47%), Positives = 170/263 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S+ L++DWDVHHG
Sbjct: 753 VATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHG 812
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+ M
Sbjct: 813 NGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLDPPM 870
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLKA 546
D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 871 GDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG 930
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDIN--SSAVTSIKETIS 603
LA GR++LALEGG+++++I A C ALLG+ L PL E L ++V S+++ I
Sbjct: 931 LAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPYDNSVRSMEKVID 990
Query: 604 SHKAYWSSLKFLVALPENKLLSA 626
H YW SL+ L + L+ A
Sbjct: 991 IHSQYWRSLQRLASTVGYSLVEA 1013
Score = 401 (146.2 bits), Expect = 3.2e-34, P = 3.2e-34
Identities = 80/167 (47%), Positives = 106/167 (63%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S+ L++DWDVHHG
Sbjct: 753 VATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHG 812
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY+DP VLY+S+HRYD G+FFP S P VG G G GFNVN+A+ M
Sbjct: 813 NGTQQAFYSDPSVLYVSLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLDPPM 870
Query: 277 SDPEYIAAFQQVILPMYALDNHGLSRVLILD-WDVHHGNGTQAMFYN 322
D EY+AAF+ V++P+ + VL+ +D G+ T YN
Sbjct: 871 GDAEYLAAFRTVVMPI--ANEFAPDVVLVSSGFDAVEGHPTPLGGYN 915
Score = 237 (88.5 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 47/95 (49%), Positives = 59/95 (62%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S+ L++DWDVHHGNGTQ FY+DP VLY+S+HRYD
Sbjct: 775 STPMGFCYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYVSLHRYD 834
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 835 DGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLD 867
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 608 (219.1 bits), Expect = 1.0e-58, P = 1.0e-58
Identities = 121/258 (46%), Positives = 166/258 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V + E +G A++RPPGHHA+ GFC FN+V++A + S++LI+DWDVHHG
Sbjct: 651 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIMDWDVHHG 710
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW M
Sbjct: 711 NGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGGLDPPM 768
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLKA 546
DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T L +
Sbjct: 769 GDPEYLAAFRMVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMS 828
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA G ++LALEGG+++++I A C ALLG+ + PL E N +A+ S++ I
Sbjct: 829 LAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIRSLEAVIR 888
Query: 604 SHKAYWSSLKFLVALPEN 621
H YW ++ L + P++
Sbjct: 889 VHSKYWGCMQRLASCPDS 906
Score = 392 (143.0 bits), Expect = 2.7e-33, P = 2.7e-33
Identities = 72/136 (52%), Positives = 92/136 (67%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V + E +G A++RPPGHHA+ GFC FN+V++A + S++LI+DWDVHHG
Sbjct: 651 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIMDWDVHHG 710
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW M
Sbjct: 711 NGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGGLDPPM 768
Query: 277 SDPEYIAAFQQVILPM 292
DPEY+AAF+ V++P+
Sbjct: 769 GDPEYLAAFRMVVMPI 784
Score = 250 (93.1 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 48/82 (58%), Positives = 55/82 (67%)
Query: 285 FQQVILPMYALDNHG-LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + L G S++LI+DWDVHHGNGTQ FY DP VLYIS+HR+D G+FFP S
Sbjct: 681 FNSVAIACRQLQQQGKASKILIMDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS 740
Query: 344 KDAGPHNVGEGKGEGFNVNVAW 365
VG G GEGFNVNVAW
Sbjct: 741 --GAVDEVGAGSGEGFNVNVAW 760
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 121/254 (47%), Positives = 163/254 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ K + +VLI+DWD+HHG
Sbjct: 355 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHG 414
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 415 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 472
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 473 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 532
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV ++++ I
Sbjct: 533 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIG 592
Query: 604 SHKAYWSSLKFLVA 617
+WS ++ A
Sbjct: 593 IQSKHWSCVQRFAA 606
Score = 396 (144.5 bits), Expect = 2.9e-34, P = 2.9e-34
Identities = 73/136 (53%), Positives = 92/136 (67%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ K + +VLI+DWD+HHG
Sbjct: 355 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHG 414
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 415 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 472
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 473 GDVEYLTAFRTVVMPI 488
Score = 260 (96.6 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 51/98 (52%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 401 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGY 458
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 459 NVNVAWTGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 495
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 608 (219.1 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 124/256 (48%), Positives = 165/256 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 815 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHG 874
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 875 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 932
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 933 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 992
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV ++++ I
Sbjct: 993 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIE 1052
Query: 604 SHKAYWSSL-KFLVAL 618
+WS + KF L
Sbjct: 1053 IQSKHWSCVQKFAAGL 1068
Score = 400 (145.9 bits), Expect = 4.7e-34, P = 4.7e-34
Identities = 74/136 (54%), Positives = 93/136 (68%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 815 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHG 874
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 875 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 932
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 933 GDVEYLTAFRTVVMPI 948
Score = 260 (96.6 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 51/98 (52%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 861 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGY 918
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 919 NVNVAWTGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 955
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 122/256 (47%), Positives = 164/256 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 519 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHG 578
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 579 NGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 636
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 637 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 696
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSS--AVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L S AV ++++ I
Sbjct: 697 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIE 756
Query: 604 SHKAYWSSL-KFLVAL 618
+WS + +F L
Sbjct: 757 IQSKHWSCVQRFATGL 772
Score = 395 (144.1 bits), Expect = 8.6e-34, P = 8.6e-34
Identities = 73/136 (53%), Positives = 93/136 (68%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 519 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHG 578
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 579 NGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 636
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 637 GDVEYLTAFRTVVMPI 652
Score = 255 (94.8 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 50/98 (51%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 565 VGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGY 622
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 623 NVNVAWTGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 659
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 606 (218.4 bits), Expect = 3.5e-58, P = 3.5e-58
Identities = 128/268 (47%), Positives = 170/268 (63%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S+ LI+DW
Sbjct: 779 ELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLDVSKTLIVDW 838
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 839 DVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGG 896
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T
Sbjct: 897 LDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT 956
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSI 598
L LA GRI+LALEGG+++++I A C ALLG+ L PL E L N++AV S+
Sbjct: 957 KQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSM 1016
Query: 599 KETISSHKAYWSSLKFLVALPENKLLSA 626
++ I H E+ LL A
Sbjct: 1017 EKVIEIHSELCGPRARFATRWEHSLLDA 1044
Score = 412 (150.1 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 84/171 (49%), Positives = 108/171 (63%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+V V GE +G A++RPPGHHAE+ P GFC FN+V++AAK +S+ LI+DWD
Sbjct: 780 LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLDVSKTLIVDWD 839
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN--- 272
VHHGNGTQ FYNDP VLYIS+HRYD G+FFP S P VG G G GFNVN+A+
Sbjct: 840 VHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGL 897
Query: 273 KKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILD-WDVHHGNGTQAMFYN 322
M D EY+AAF+ V++P+ + VL+ +D G+ T YN
Sbjct: 898 DPPMGDAEYLAAFRTVVMPI--ANEFAPDVVLVSSGFDAVEGHPTPLGGYN 946
Score = 246 (91.7 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 50/95 (52%), Positives = 59/95 (62%)
Query: 277 SDPEYIAAFQQVILPMYALDNH-GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 335
S P F V + L +S+ LI+DWDVHHGNGTQ FYNDP VLYIS+HRYD
Sbjct: 806 STPMGFCYFNSVAIAAKLLQQRLDVSKTLIVDWDVHHGNGTQQAFYNDPNVLYISLHRYD 865
Query: 336 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
G+FFP S P VG G G GFNVN+A+ +D
Sbjct: 866 DGNFFPGS--GAPDEVGTGPGVGFNVNMAFTGGLD 898
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 604 (217.7 bits), Expect = 3.7e-58, P = 3.7e-58
Identities = 121/258 (46%), Positives = 166/258 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V + E +G A++RPPGHHA+ GFC FN+V++A + S++LI+DWDVHHG
Sbjct: 688 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDVHHG 747
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW M
Sbjct: 748 NGTQQTFYQDPNVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGGLDPPM 805
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLKA 546
DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T L +
Sbjct: 806 GDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPPPLGGYHVSAKCFGYMTQQLMS 865
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA G ++LALEGG+++++I A C ALLG+ + PL E N +A+ S++ I
Sbjct: 866 LAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIRSLEAVIR 925
Query: 604 SHKAYWSSLKFLVALPEN 621
H YW ++ L + P++
Sbjct: 926 VHSEYWGCMQRLASRPDS 943
Score = 389 (142.0 bits), Expect = 6.4e-33, P = 6.4e-33
Identities = 72/136 (52%), Positives = 92/136 (67%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V + E +G A++RPPGHHA+ GFC FN+V++A + S++LI+DWDVHHG
Sbjct: 688 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDVHHG 747
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW M
Sbjct: 748 NGTQQTFYQDPNVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGGLDPPM 805
Query: 277 SDPEYIAAFQQVILPM 292
DPEY+AAF+ V++P+
Sbjct: 806 GDPEYLAAFRIVVMPI 821
Score = 250 (93.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/82 (58%), Positives = 55/82 (67%)
Query: 285 FQQVILPMYALDNHG-LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + L G S++LI+DWDVHHGNGTQ FY DP VLYIS+HR+D G+FFP S
Sbjct: 718 FNSVAIACRQLQQQGKASKILIVDWDVHHGNGTQQTFYQDPNVLYISLHRHDDGNFFPGS 777
Query: 344 KDAGPHNVGEGKGEGFNVNVAW 365
VG G GEGFNVNVAW
Sbjct: 778 --GAVDEVGAGSGEGFNVNVAW 797
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 605 (218.0 bits), Expect = 5.2e-58, P = 5.2e-58
Identities = 124/256 (48%), Positives = 165/256 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 815 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHG 874
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 875 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWIGGVDPPI 932
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 933 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 992
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV ++++ I
Sbjct: 993 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIE 1052
Query: 604 SHKAYWSSL-KFLVAL 618
+WS + KF L
Sbjct: 1053 IQSKHWSCVQKFAAGL 1068
Score = 397 (144.8 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 74/136 (54%), Positives = 93/136 (68%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 815 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHG 874
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 875 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWIGGVDPPI 932
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 933 GDVEYLTAFRTVVMPI 948
Score = 257 (95.5 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 51/98 (52%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 861 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGY 918
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 919 NVNVAWIGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 955
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 601 (216.6 bits), Expect = 6.2e-58, P = 6.2e-58
Identities = 121/258 (46%), Positives = 165/258 (63%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V + E +G A++RPPGHHA+ GFC FN+V++A + S++LI+DWDVHHG
Sbjct: 652 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHG 711
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW M
Sbjct: 712 NGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGGLDPPM 769
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLKA 546
DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 770 GDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMN 829
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA G ++LALEGG+++++I A C ALLG+ + PL E N +A+ S++ I
Sbjct: 830 LAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIR 889
Query: 604 SHKAYWSSLKFLVALPEN 621
H YW ++ L + P++
Sbjct: 890 VHSKYWGCMQRLASCPDS 907
Score = 389 (142.0 bits), Expect = 5.9e-33, P = 5.9e-33
Identities = 72/136 (52%), Positives = 92/136 (67%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V + E +G A++RPPGHHA+ GFC FN+V++A + S++LI+DWDVHHG
Sbjct: 652 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHG 711
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW M
Sbjct: 712 NGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGGLDPPM 769
Query: 277 SDPEYIAAFQQVILPM 292
DPEY+AAF+ V++P+
Sbjct: 770 GDPEYLAAFRIVVMPI 785
Score = 243 (90.6 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 44/65 (67%), Positives = 50/65 (76%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
S++LI+DWDVHHGNGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFN
Sbjct: 699 SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFN 756
Query: 361 VNVAW 365
VNVAW
Sbjct: 757 VNVAW 761
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 598 (215.6 bits), Expect = 9.2e-58, P = 9.2e-58
Identities = 122/256 (47%), Positives = 164/256 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 601 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHG 660
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 661 NGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 718
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 719 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 778
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSS--AVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L S AV ++++ I
Sbjct: 779 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIE 838
Query: 604 SHKAYWSSL-KFLVAL 618
+WS + +F L
Sbjct: 839 IQSKHWSCVQRFATGL 854
Score = 395 (144.1 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 73/136 (53%), Positives = 93/136 (68%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 601 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHG 660
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 661 NGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 718
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 719 GDVEYLTAFRTVVMPI 734
Score = 255 (94.8 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 50/98 (51%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 647 VGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGY 704
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 705 NVNVAWTGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 741
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 598 (215.6 bits), Expect = 9.2e-58, P = 9.2e-58
Identities = 122/256 (47%), Positives = 164/256 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 601 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHG 660
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 661 NGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 718
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 719 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 778
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSS--AVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L S AV ++++ I
Sbjct: 779 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIE 838
Query: 604 SHKAYWSSL-KFLVAL 618
+WS + +F L
Sbjct: 839 IQSKHWSCVQRFATGL 854
Score = 395 (144.1 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 73/136 (53%), Positives = 93/136 (68%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 601 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHG 660
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 661 NGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 718
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 719 GDVEYLTAFRTVVMPI 734
Score = 255 (94.8 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 50/98 (51%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 647 VGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGY 704
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 705 NVNVAWTGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 741
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 601 (216.6 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 121/254 (47%), Positives = 163/254 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ K + +VLI+DWD+HHG
Sbjct: 818 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHG 877
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 878 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 935
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 936 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 995
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV ++++ I
Sbjct: 996 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIE 1055
Query: 604 SHKAYWSSLKFLVA 617
+WS ++ A
Sbjct: 1056 IQSKHWSCVQRFAA 1069
Score = 396 (144.5 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 73/136 (53%), Positives = 92/136 (67%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ K + +VLI+DWD+HHG
Sbjct: 818 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHG 877
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 878 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 935
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 936 GDVEYLTAFRTVVMPI 951
Score = 260 (96.6 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 51/98 (52%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 864 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGY 921
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 922 NVNVAWTGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 958
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 600 (216.3 bits), Expect = 1.6e-57, P = 1.6e-57
Identities = 121/254 (47%), Positives = 163/254 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ K + +VLI+DWD+HHG
Sbjct: 783 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHG 842
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 843 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIGYNVNVAWTGGVDPPI 900
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 901 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 960
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV ++++ I
Sbjct: 961 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIE 1020
Query: 604 SHKAYWSSLKFLVA 617
+WS ++ A
Sbjct: 1021 IQSKHWSCVQRFAA 1034
Score = 395 (144.1 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 73/136 (53%), Positives = 92/136 (67%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ K + +VLI+DWD+HHG
Sbjct: 783 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHG 842
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 843 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIGYNVNVAWTGGVDPPI 900
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 901 GDVEYLTAFRTVVMPI 916
Score = 259 (96.2 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 51/98 (52%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 829 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIGY 886
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 887 NVNVAWTGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 923
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 600 (216.3 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 122/254 (48%), Positives = 162/254 (63%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 806 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHG 865
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 866 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 923
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA +F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 924 GDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 983
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSS--AVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L S AV ++++ I
Sbjct: 984 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLEKVIE 1043
Query: 604 SHKAYWSSLKFLVA 617
+WS ++ A
Sbjct: 1044 IQSKHWSCVQRFAA 1057
Score = 400 (145.9 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 74/136 (54%), Positives = 93/136 (68%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 806 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHG 865
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 866 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGYNVNVAWTGGVDPPI 923
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 924 GDVEYLTAFRTVVMPI 939
Score = 256 (95.2 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 46/71 (64%), Positives = 54/71 (76%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 852 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGVGY 909
Query: 360 NVNVAWNKVVD 370
NVNVAW VD
Sbjct: 910 NVNVAWTGGVD 920
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 600 (216.3 bits), Expect = 1.8e-57, P = 1.8e-57
Identities = 121/254 (47%), Positives = 163/254 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ K + +VLI+DWD+HHG
Sbjct: 810 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHG 869
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 870 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIGYNVNVAWTGGVDPPI 927
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 928 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 987
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV ++++ I
Sbjct: 988 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIE 1047
Query: 604 SHKAYWSSLKFLVA 617
+WS ++ A
Sbjct: 1048 IQSKHWSCVQRFAA 1061
Score = 395 (144.1 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 73/136 (53%), Positives = 92/136 (67%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ K + +VLI+DWD+HHG
Sbjct: 810 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHG 869
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 870 NGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIGYNVNVAWTGGVDPPI 927
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 928 GDVEYLTAFRTVVMPI 943
Score = 259 (96.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 51/98 (52%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FYNDP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 856 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGIGY 913
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 914 NVNVAWTGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 950
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 598 (215.6 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 122/256 (47%), Positives = 164/256 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 804 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHG 863
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 864 NGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMGYNVNVAWTGGVDPPI 921
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLKA 546
D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 922 GDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMT 981
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSS--AVTSIKETIS 603
LA GR++LALEGG+++++I A C ALL L PL E+ L S AV ++++ I
Sbjct: 982 LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIE 1041
Query: 604 SHKAYWSSL-KFLVAL 618
+WS + +F L
Sbjct: 1042 IQSKHWSCVQRFATGL 1057
Score = 395 (144.1 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 73/136 (53%), Positives = 93/136 (68%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V GE +G AIIRPPGHHAE+ GFC FN+V++ AK + +VLI+DWD+HHG
Sbjct: 804 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHG 863
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+NVNVAW +
Sbjct: 864 NGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMGYNVNVAWTGGVDPPI 921
Query: 277 SDPEYIAAFQQVILPM 292
D EY+ AF+ V++P+
Sbjct: 922 GDVEYLTAFRTVVMPI 937
Score = 255 (94.8 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 50/98 (51%), Positives = 64/98 (65%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 359
+ +VLI+DWD+HHGNGTQ FY+DP VLYIS+HRYD+G+FFP S P VG G G G+
Sbjct: 850 VGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGS--GAPEEVGGGPGMGY 907
Query: 360 NVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
NVNVAW VD + G+ + A ++ P H D
Sbjct: 908 NVNVAWTGGVDPPI-GDVEYLTAFRTVVMPIAHEFSPD 944
>UNIPROTKB|H9KZE7 [details] [associations]
symbol:H9KZE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
junction assembly" evidence=IEA] [GO:0032703 "negative regulation
of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0071889
"14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
Uniprot:H9KZE7
Length = 951
Score = 585 (211.0 bits), Expect = 3.6e-56, P = 3.6e-56
Identities = 119/250 (47%), Positives = 163/250 (65%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V + E +G A++RPPGHHA+ GFC FN+V++AA+ LS++LI+DWDVHHG
Sbjct: 651 VASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHG 710
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ +FY DP VLYIS+HR+D G+FFP S A VG G GEGFNVN+AW M
Sbjct: 711 NGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAAD--EVGAGPGEGFNVNIAWTGGLDPPM 768
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLKA 546
DPEY+AAF+ V++PIA++F+P++VLVSAG+DA P LGG KVS + + + T L +
Sbjct: 769 GDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMS 828
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLG---DPLPLLESDLDINSSAVTSIKETIS 603
LA G I+LALEGG+++++I A L DPLP N++AV S++ I
Sbjct: 829 LAGGAIVLALEGGHDLTAICDASEAYPSHLSPWQLDPLPEESMRQKPNANAVRSLEAVIQ 888
Query: 604 SHKAYWSSLK 613
YW +++
Sbjct: 889 VQSKYWVAVQ 898
Score = 401 (146.2 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 74/136 (54%), Positives = 96/136 (70%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V + E +G A++RPPGHHA+ GFC FN+V++AA+ LS++LI+DWDVHHG
Sbjct: 651 VASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHG 710
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ +FY DP VLYIS+HR+D G+FFP S A VG G GEGFNVN+AW M
Sbjct: 711 NGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAAD--EVGAGPGEGFNVNIAWTGGLDPPM 768
Query: 277 SDPEYIAAFQQVILPM 292
DPEY+AAF+ V++P+
Sbjct: 769 GDPEYLAAFRTVVMPI 784
Score = 261 (96.9 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 55/114 (48%), Positives = 70/114 (61%)
Query: 285 FQQVILPMYALDNHG-LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + L G LS++LI+DWDVHHGNGTQ +FY DP VLYIS+HR+D G+FFP S
Sbjct: 681 FNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGS 740
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKVVDSVLNGESAHGVA---IIRPPGHHAEQD 394
A VG G GEGFNVN+AW +D + G+ + A ++ P H D
Sbjct: 741 GAAD--EVGAGPGEGFNVNIAWTGGLDPPM-GDPEYLAAFRTVVMPIAHEFSPD 791
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 99/191 (51%), Positives = 142/191 (74%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL G +GVA++RPPGHH+++ GFC+FNNV++AA++A +GL R+LI+DW
Sbjct: 112 RLVDAVLTGAVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVDW 171
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q +F +DP VLY S HRY+HG+F+P ++ VG G+G+GF VN+ WN+
Sbjct: 172 DVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQV 231
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE +AH T L+
Sbjct: 232 GMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQV 291
Query: 547 LAQGRIILALE 557
LA GRI LE
Sbjct: 292 LAGGRICAVLE 302
Score = 427 (155.4 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 71/137 (51%), Positives = 103/137 (75%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL G +GVA++RPPGHH+++ GFC+FNNV++AA++A +GL R+LI+DWD
Sbjct: 113 LVDAVLTGAVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVDWD 172
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG G Q +F +DP VLY S HRY+HG+F+P ++ VG G+G+GF VN+ WN+ G
Sbjct: 173 VHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVG 232
Query: 276 MSDPEYIAAFQQVILPM 292
M + +Y+AAF V+LP+
Sbjct: 233 MGNADYLAAFLHVLLPL 249
Score = 243 (90.6 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 43/85 (50%), Positives = 58/85 (68%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A +GL R+LI+DWDVHHG G Q +F +DP VLY S HRY+HG+F+P
Sbjct: 147 FNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFL 206
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
++ VG G+G+GF VN+ WN+V
Sbjct: 207 PESDADTVGRGRGQGFTVNLPWNQV 231
Score = 61 (26.5 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 500 VILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGG 559
++LP+AY F P++VL++ G P G + + +A A L++ GRI+ +E
Sbjct: 482 LVLPLAYGFQPDMVLMALG-------PAHGLQ-NAQA-ALLAAMLRSPVGGRILALVE-- 530
Query: 560 YNISSISYAMTLCTKALLGDPLPLL 584
S + A TL + L G+ P L
Sbjct: 531 -EESILQLARTLA-QVLHGETPPSL 553
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 571 (206.1 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 117/242 (48%), Positives = 156/242 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
V + E +G A++RPPGHHA+ GFC FN+V++A + S++LI+DWDVHHG
Sbjct: 708 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHG 767
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 488
NGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW M
Sbjct: 768 NGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGGLDPPM 825
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLKA 546
DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 826 GDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMN 885
Query: 547 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIKETIS 603
LA G ++LALEGG+++++I A C ALLG+ + PL E N +A+ S++ I
Sbjct: 886 LAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIR 945
Query: 604 SH 605
H
Sbjct: 946 VH 947
Score = 389 (142.0 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 72/136 (52%), Positives = 92/136 (67%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V + E +G A++RPPGHHA+ GFC FN+V++A + S++LI+DWDVHHG
Sbjct: 708 VASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHG 767
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW M
Sbjct: 768 NGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGGLDPPM 825
Query: 277 SDPEYIAAFQQVILPM 292
DPEY+AAF+ V++P+
Sbjct: 826 GDPEYLAAFRIVVMPI 841
Score = 243 (90.6 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 44/65 (67%), Positives = 50/65 (76%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
S++LI+DWDVHHGNGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFN
Sbjct: 755 SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFN 812
Query: 361 VNVAW 365
VNVAW
Sbjct: 813 VNVAW 817
>UNIPROTKB|I3L961 [details] [associations]
symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
Uniprot:I3L961
Length = 606
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 96/192 (50%), Positives = 141/192 (73%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+V+ G +G+A++RPPGHH+++ GFC+FN+V++AAK+A HGL R+LI+DW
Sbjct: 68 QLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDW 127
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
D+HHG GTQ +F +DP VLY S HRY+HG F+P+ +++ VG G+G GF VN+ WN+
Sbjct: 128 DIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQV 187
Query: 487 GMSDPEYIAAF-QQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLK 545
GM + +Y+ AF Q V+LP+A++FN ELVLVSAG+D+ + D G + +PE +AH T L+
Sbjct: 188 GMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQ 247
Query: 546 ALAQGRIILALE 557
LA GR+ LE
Sbjct: 248 VLAGGRVCAVLE 259
Score = 418 (152.2 bits), Expect = 4.6e-41, Sum P(2) = 4.6e-41
Identities = 70/138 (50%), Positives = 104/138 (75%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+V+ G +G+A++RPPGHH+++ GFC+FN+V++AAK+A HGL R+LI+DWD
Sbjct: 69 LVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWD 128
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
+HHG GTQ +F +DP VLY S HRY+HG F+P+ +++ VG G+G GF VN+ WN+ G
Sbjct: 129 IHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVG 188
Query: 276 MSDPEYIAAF-QQVILPM 292
M + +Y+ AF Q V+LP+
Sbjct: 189 MGNADYMPAFLQXVLLPL 206
Score = 252 (93.8 bits), Expect = 9.4e-21, Sum P(2) = 9.4e-21
Identities = 44/85 (51%), Positives = 59/85 (69%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A HGL R+LI+DWD+HHG GTQ +F +DP VLY S HRY+HG F+P+
Sbjct: 103 FNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYL 162
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+++ VG G+G GF VN+ WN+V
Sbjct: 163 RESDADTVGRGRGLGFTVNLPWNQV 187
Score = 70 (29.7 bits), Expect = 4.6e-41, Sum P(2) = 4.6e-41
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 443 RVLYISVHRYDHGSFFPHSKDAGPH---NVGEGKGEG----FNVNVAWNKKGMSDPEYIA 495
R+L ++V + D PH D G NVG GK F+V+V + + +++
Sbjct: 452 RLLCVAVGQLDRP---PHLTDDGGTLWLNVG-GKEAAALSMFHVSVPLPR---TTGGFLS 504
Query: 496 AFQQVILPIAYQFNPELVLVSAG 518
++LP+AY F P+LVLV G
Sbjct: 505 CVLALVLPLAYSFQPDLVLVVLG 527
Score = 40 (19.1 bits), Expect = 6.5e-38, Sum P(2) = 6.5e-38
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 462 KDAGPHNVGEGKG-EGFNVNVAWNKKGMSDPEYIAAFQQVILPIA 505
+DAGP G+ +G EG ++ + + P +++ QQ +A
Sbjct: 266 EDAGPEAEGQREGCEGALQSIQ-SVRAAQAPHWMSLRQQASCAVA 309
>UNIPROTKB|I3LKB5 [details] [associations]
symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
Uniprot:I3LKB5
Length = 621
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 96/192 (50%), Positives = 141/192 (73%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+V+ G +G+A++RPPGHH+++ GFC+FN+V++AAK+A HGL R+LI+DW
Sbjct: 82 QLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDW 141
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
D+HHG GTQ +F +DP VLY S HRY+HG F+P+ +++ VG G+G GF VN+ WN+
Sbjct: 142 DIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQV 201
Query: 487 GMSDPEYIAAF-QQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLK 545
GM + +Y+ AF Q V+LP+A++FN ELVLVSAG+D+ + D G + +PE +AH T L+
Sbjct: 202 GMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQ 261
Query: 546 ALAQGRIILALE 557
LA GR+ LE
Sbjct: 262 VLAGGRVCAVLE 273
Score = 418 (152.2 bits), Expect = 8.8e-41, Sum P(2) = 8.8e-41
Identities = 70/138 (50%), Positives = 104/138 (75%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+V+ G +G+A++RPPGHH+++ GFC+FN+V++AAK+A HGL R+LI+DWD
Sbjct: 83 LVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWD 142
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
+HHG GTQ +F +DP VLY S HRY+HG F+P+ +++ VG G+G GF VN+ WN+ G
Sbjct: 143 IHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVG 202
Query: 276 MSDPEYIAAF-QQVILPM 292
M + +Y+ AF Q V+LP+
Sbjct: 203 MGNADYMPAFLQXVLLPL 220
Score = 252 (93.8 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 44/85 (51%), Positives = 59/85 (69%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A HGL R+LI+DWD+HHG GTQ +F +DP VLY S HRY+HG F+P+
Sbjct: 117 FNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYL 176
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+++ VG G+G GF VN+ WN+V
Sbjct: 177 RESDADTVGRGRGLGFTVNLPWNQV 201
Score = 70 (29.7 bits), Expect = 8.8e-41, Sum P(2) = 8.8e-41
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 443 RVLYISVHRYDHGSFFPHSKDAGPH---NVGEGKGEG----FNVNVAWNKKGMSDPEYIA 495
R+L ++V + D PH D G NVG GK F+V+V + + +++
Sbjct: 464 RLLCVAVGQLDRP---PHLTDDGGTLWLNVG-GKEAAALSMFHVSVPLPR---TTGGFLS 516
Query: 496 AFQQVILPIAYQFNPELVLVSAG 518
++LP+AY F P+LVLV G
Sbjct: 517 CVLALVLPLAYSFQPDLVLVVLG 539
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 560 (202.2 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 115/250 (46%), Positives = 160/250 (64%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGL--SRVLILDWDVH 429
V G +G A IRPPGHHAE ++ GFC FNNV+VA K + +++ I+DWDVH
Sbjct: 590 VAEGRLKNGFACIRPPGHHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVH 649
Query: 430 HGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 489
HGNGTQ F NDP VLY+S+HR+D G+FFP + VG+ +G VNV ++ M
Sbjct: 650 HGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTGSVT--EVGKNDAKGLTVNVPFSGDVMR 707
Query: 490 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLKAL 547
DPEY+AA++ VI P+ F P+ ++VSAG+DAC P LGG +V+PE + + T L
Sbjct: 708 DPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTKSLLNY 767
Query: 548 AQGRIILALEGGYNISSISYAMTLCTKALLG--DPLPLLES-DLDI--NSSAVTSIKETI 602
A G+++LALEGGY++ SIS A C +AL+G D L S L+ N SAV ++++ I
Sbjct: 768 ASGKVVLALEGGYDLKSISEAAQQCVQALIGESDDAGRLSSVALESLPNPSAVETLQKVI 827
Query: 603 SSHKAYWSSL 612
+ HK+YW +L
Sbjct: 828 AIHKSYWPAL 837
Score = 347 (127.2 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 67/137 (48%), Positives = 89/137 (64%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGL--SRVLILDWDVH 217
V G +G A IRPPGHHAE ++ GFC FNNV+VA K + +++ I+DWDVH
Sbjct: 590 VAEGRLKNGFACIRPPGHHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVH 649
Query: 218 HGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 277
HGNGTQ F NDP VLY+S+HR+D G+FFP + VG+ +G VNV ++ M
Sbjct: 650 HGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTGSVT--EVGKNDAKGLTVNVPFSGDVMR 707
Query: 278 DPEYIAAFQQVILPMYA 294
DPEY+AA++ VI P+ A
Sbjct: 708 DPEYLAAWRTVIEPVMA 724
Score = 186 (70.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
+++ I+DWDVHHGNGTQ F NDP VLY+S+HR+D G+FFP + VG+ +G
Sbjct: 639 AKIAIIDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTGSVT--EVGKNDAKGLT 696
Query: 361 VNVAWN 366
VNV ++
Sbjct: 697 VNVPFS 702
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 115/264 (43%), Positives = 164/264 (62%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
+ G +G A++RPPGHHA GFC+ NN +VAA A G +VLI+DWDVHHG
Sbjct: 259 IFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVA-QAAGAKKVLIVDWDVHHG 317
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 491
NGTQ +F + VLYIS+HR++ G+F+P + A VG GEG+ VNV W+ G+ D
Sbjct: 318 NGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAAD--EVGSNGGEGYCVNVPWSCGGVGDK 375
Query: 492 EYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR 551
+YI AFQ V+LPIA F+P+ V++SAG+DA DPLG C V+P Y+ T L L G+
Sbjct: 376 DYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGK 435
Query: 552 IILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSS----AVTSIKETISSHKA 607
+++ LEGGYN+ SIS + T K LLG+ P E++L I ++ + ++ + ++
Sbjct: 436 MLVILEGGYNLRSISASATAVIKVLLGEN-P--ENELPIATTPSVAGLQTVLDVLNIQLE 492
Query: 608 YWSSLKFLVALPENKLLSADYAQL 631
+W SL A+ +KLLS A+L
Sbjct: 493 FWPSL----AISYSKLLSELEARL 512
Score = 338 (124.0 bits), Expect = 6.1e-28, P = 6.1e-28
Identities = 65/133 (48%), Positives = 87/133 (65%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
+ G +G A++RPPGHHA GFC+ NN +VAA A G +VLI+DWDVHHG
Sbjct: 259 IFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVA-QAAGAKKVLIVDWDVHHG 317
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 279
NGTQ +F + VLYIS+HR++ G+F+P + A VG GEG+ VNV W+ G+ D
Sbjct: 318 NGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAAD--EVGSNGGEGYCVNVPWSCGGVGDK 375
Query: 280 EYIAAFQQVILPM 292
+YI AFQ V+LP+
Sbjct: 376 DYIFAFQHVVLPI 388
Score = 193 (73.0 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 299 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 358
G +VLI+DWDVHHGNGTQ +F + VLYIS+HR++ G+F+P + A VG GEG
Sbjct: 303 GAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAAD--EVGSNGGEG 360
Query: 359 FNVNVAWN 366
+ VNV W+
Sbjct: 361 YCVNVPWS 368
>UNIPROTKB|C9J8B8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
Length = 619
Score = 427 (155.4 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 70/141 (49%), Positives = 104/141 (73%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL G +G+A++RPPGHH ++ GFC+FNNV++AA +A HGL R+L++DW
Sbjct: 112 QLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDW 171
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG G Q +F +DP VLY S HRY+HG F+P +++ VG G+G GF VN+ WN+
Sbjct: 172 DVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQV 231
Query: 487 GMSDPEYIAAFQQVILPIAYQ 507
GM + +Y+AAF ++LP+A++
Sbjct: 232 GMGNADYVAAFLHLLLPLAFE 252
Score = 417 (151.9 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 69/137 (50%), Positives = 100/137 (72%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL G +G+A++RPPGHH ++ GFC+FNNV++AA +A HGL R+L++DWD
Sbjct: 113 LVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWD 172
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG G Q +F +DP VLY S HRY+HG F+P +++ VG G+G GF VN+ WN+ G
Sbjct: 173 VHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVG 232
Query: 276 MSDPEYIAAFQQVILPM 292
M + +Y+AAF ++LP+
Sbjct: 233 MGNADYVAAFLHLLLPL 249
Score = 241 (89.9 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 43/85 (50%), Positives = 57/85 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I +A HGL R+L++DWDVHHG G Q +F +DP VLY S HRY+HG F+P
Sbjct: 147 FNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFL 206
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
+++ VG G+G GF VN+ WN+V
Sbjct: 207 RESDADAVGRGQGLGFTVNLPWNQV 231
Score = 106 (42.4 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 554 LALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAYWSSLK 613
LA EGGY++ S++ ++ + + LLGDP P L + SA+ SI+ ++ +W SL+
Sbjct: 249 LAFEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQ 308
Score = 77 (32.2 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
+++ ++LP+AY F P+LVLV+ G P G + P A A L+ LA GR+
Sbjct: 505 FLSCILGLVLPLAYGFQPDLVLVALG-------PGHGLQ-GPHA-ALLAAMLRGLAGGRV 555
Query: 553 ILALE 557
+ LE
Sbjct: 556 LALLE 560
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 98/203 (48%), Positives = 130/203 (64%)
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGG 196
Query: 485 -KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFT 541
M DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T
Sbjct: 197 LDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMT 256
Query: 542 HWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSI 598
L LA G ++LALEGG+++++I A C ALLG+ + PL E N +A+ S+
Sbjct: 257 QQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSL 316
Query: 599 KETISSHKAYWSSLKFLVALPEN 621
+ I H YW ++ L + P++
Sbjct: 317 EAVIRVHSKYWGCMQRLASCPDS 339
Score = 250 (93.1 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 49/81 (60%), Positives = 57/81 (70%)
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 272
DVHHGNGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAWAGG 196
Query: 273 -KKGMSDPEYIAAFQQVILPM 292
M DPEY+AAF+ V++P+
Sbjct: 197 LDPPMGDPEYLAAFRIVVMPI 217
Score = 208 (78.3 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 39/57 (68%), Positives = 42/57 (73%)
Query: 309 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 365
DVHHGNGTQ FY DP VLYIS+HR+D G+FFP S VG G GEGFNVNVAW
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS--GAVDEVGAGSGEGFNVNVAW 193
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 433 (157.5 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 76/141 (53%), Positives = 102/141 (72%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DW
Sbjct: 138 RLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDW 197
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+
Sbjct: 198 DVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQV 257
Query: 487 GMSDPEYIAAFQQVILPIAYQ 507
GM D +YIAAF V+LP+A +
Sbjct: 258 GMRDADYIAAFLHVLLPVALE 278
Score = 430 (156.4 bits), Expect = 2.9e-40, P = 2.9e-40
Identities = 80/149 (53%), Positives = 106/149 (71%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DWD
Sbjct: 139 LVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWD 198
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
VHHG GTQ F DP VLY S+HRY+ G F+PH K + G G+G+G+ +NV WN+ G
Sbjct: 199 VHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVG 258
Query: 276 MSDPEYIAAFQQVILPMYALDNHGLSRVL 304
M D +YIAAF V+LP+ AL+ G+ VL
Sbjct: 259 MRDADYIAAFLHVLLPV-ALEVLGIWGVL 286
Score = 241 (89.9 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 43/85 (50%), Positives = 55/85 (64%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V + YA H + RVLI+DWDVHHG GTQ F DP VLY S+HRY+ G F+PH
Sbjct: 173 FNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHL 232
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKV 368
K + G G+G+G+ +NV WN+V
Sbjct: 233 KASNWSTTGFGQGQGYTINVPWNQV 257
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 425 (154.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 91/214 (42%), Positives = 131/214 (61%)
Query: 380 GVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFY 439
G A+IRPPGHHA P GFC+F NV++AA++A HGL R+ I+D+DVHHGNGT F
Sbjct: 192 GFALIRPPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFT 251
Query: 440 NDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQ 499
DP + ++S H+ D GS+ K + ++G+GKGEG +N+ G D F++
Sbjct: 252 EDPDIFFLSTHQ-D-GSYPGTGKIS---DIGKGKGEGTTLNLPL-PGGSGDIAMRTVFEE 305
Query: 500 VILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ----GRIILA 555
+I+P A +F P+++LVSAGYDA V DPL + + Y +K LA+ GR +
Sbjct: 306 IIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFF 365
Query: 556 LEGGYNISSISYAMTLCTKALLGDPLPLLESDLD 589
LEGGYN+ S+S ++ +ALLG+ L S+ D
Sbjct: 366 LEGGYNLESLSSSVADSFRALLGEDS--LASEFD 397
Score = 280 (103.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 58/140 (41%), Positives = 86/140 (61%)
Query: 152 VDNHVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLI 211
VD+ + S + + G A+IRPPGHHA P GFC+F NV++AA++A HGL R+ I
Sbjct: 176 VDSVIAASRNSVDPPIGFALIRPPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFI 235
Query: 212 LDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAW 271
+D+DVHHGNGT F DP + ++S H+ D GS+ K + ++G+GKGEG +N+
Sbjct: 236 IDFDVHHGNGTNDAFTEDPDIFFLSTHQ-D-GSYPGTGKIS---DIGKGKGEGTTLNLPL 290
Query: 272 NKKGMSDPEYIAAFQQVILP 291
G D F+++I+P
Sbjct: 291 -PGGSGDIAMRTVFEEIIVP 309
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 279 PEYIAAFQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHG 337
P F V I +A HGL R+ I+D+DVHHGNGT F DP + ++S H+ D G
Sbjct: 208 PMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLSTHQ-D-G 265
Query: 338 SFFPHSKDAGPHNVGEGKGEGFNVNV 363
S+ K + ++G+GKGEG +N+
Sbjct: 266 SYPGTGKIS---DIGKGKGEGTTLNL 288
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 417 (151.9 bits), Expect = 9.5e-39, P = 9.5e-39
Identities = 97/245 (39%), Positives = 141/245 (57%)
Query: 380 GVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF- 438
G+A IRPPGHHA DE CGFCIFNNV++AAK A+ N G +VLI+D+DVH GNGTQ
Sbjct: 128 GIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKAAIQN-G-QKVLIVDYDVHAGNGTQECVE 185
Query: 439 -YNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEGFNVNVAWNKKGMSDPEYIAA 496
+ V IS+HRY++G F+P+ G HN +N+ N G++D +Y A
Sbjct: 186 QMGEGNVQLISIHRYENGHFWPNMPQTGIYHNYKN------TINLPLNTIGLTDADYHAL 239
Query: 497 FQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILAL 556
F +ILP + F P+L+LVS+G+DA + DP G +V+P +A L + G + AL
Sbjct: 240 FTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRML--IDTGIPVAAL 297
Query: 557 -EGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAYWSSLKFL 615
EGGY + +++ +ALLG+ +P + + I+S+ +I + K Y S F
Sbjct: 298 LEGGYFLDALAADSEWVLRALLGEEIPRIRVE-KIHSAIADTIGRVV---KRYEGSCPFF 353
Query: 616 VALPE 620
+ E
Sbjct: 354 KKVQE 358
Score = 285 (105.4 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 61/127 (48%), Positives = 80/127 (62%)
Query: 168 GVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF- 226
G+A IRPPGHHA DE CGFCIFNNV++AAK A+ N G +VLI+D+DVH GNGTQ
Sbjct: 128 GIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKAAIQN-G-QKVLIVDYDVHAGNGTQECVE 185
Query: 227 -YNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEGFNVNVAWNKKGMSDPEYIAA 284
+ V IS+HRY++G F+P+ G HN +N+ N G++D +Y A
Sbjct: 186 QMGEGNVQLISIHRYENGHFWPNMPQTGIYHNYKN------TINLPLNTIGLTDADYHAL 239
Query: 285 FQQVILP 291
F +ILP
Sbjct: 240 FTHIILP 246
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 391 (142.7 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 88/219 (40%), Positives = 122/219 (55%)
Query: 369 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 428
VD VL+GE + RPPGHHA + GFCIFNNV++ A +AL+ H L RV ++D+DV
Sbjct: 103 VDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVDFDV 162
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEGFNVNVAWNKKG 487
HHGNG Q + NDPRV YIS H+ H F S + GP N+ N+ + G
Sbjct: 163 HHGNGIQHVCLNDPRVTYISTHQIHHFPFTGDSCEDGPFQNI-------LNIPLP---AG 212
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 547
D Y F Q+I P + +PEL+LV AGYDA D +G +S + +A T LK
Sbjct: 213 CGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKKT 272
Query: 548 AQ----GRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
A G+++ +LEGGY+ ++ ++ LL + LP
Sbjct: 273 ADEVCGGKMVFSLEGGYHYLGLAESVGASLAVLLDEALP 311
Score = 275 (101.9 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 60/136 (44%), Positives = 77/136 (56%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
VD VL+GE + RPPGHHA + GFCIFNNV++ A +AL+ H L RV ++D+DV
Sbjct: 103 VDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVDFDV 162
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEGFNVNVAWNKKG 275
HHGNG Q + NDPRV YIS H+ H F S + GP N+ N+ + G
Sbjct: 163 HHGNGIQHVCLNDPRVTYISTHQIHHFPFTGDSCEDGPFQNI-------LNIPLP---AG 212
Query: 276 MSDPEYIAAFQQVILP 291
D Y F Q+I P
Sbjct: 213 CGDSHYQKVFDQLICP 228
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 285 FQQVIL-PMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V L ++AL+ H L RV ++D+DVHHGNG Q + NDPRV YIS H+ H F S
Sbjct: 136 FNNVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQIHHFPFTGDS 195
Query: 344 KDAGP 348
+ GP
Sbjct: 196 CEDGP 200
Score = 45 (20.9 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 310 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVV 369
++H GT N R+L I + HG P VG G+ EGF+ ++V
Sbjct: 12 LNHETGTHVE--NPDRLLAIMEYINTHG-LKDRLVHVEPKRVGLGELEGFHTRKYISRVE 68
Query: 370 DSVLNG 375
+ +G
Sbjct: 69 EVGFSG 74
Score = 45 (20.9 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 24/99 (24%), Positives = 39/99 (39%)
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVN------- 268
++H GT N R+L I + HG P VG G+ EGF+
Sbjct: 12 LNHETGTHVE--NPDRLLAIMEYINTHG-LKDRLVHVEPKRVGLGELEGFHTRKYISRVE 68
Query: 269 -VAWNKKGMSDPEYIAAFQQVILPMYALDN--HGLSRVL 304
V ++ G D + + + +YA+ G+ +VL
Sbjct: 69 EVGFSGGGWLDQDTVISVDSYETALYAVGGVLEGVDKVL 107
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 391 (142.7 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 88/219 (40%), Positives = 122/219 (55%)
Query: 369 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 428
VD VL+GE + RPPGHHA + GFCIFNNV++ A +AL+ H L RV ++D+DV
Sbjct: 103 VDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVDFDV 162
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEGFNVNVAWNKKG 487
HHGNG Q + NDPRV YIS H+ H F S + GP N+ N+ + G
Sbjct: 163 HHGNGIQHVCLNDPRVTYISTHQIHHFPFTGDSCEDGPFQNI-------LNIPLP---AG 212
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 547
D Y F Q+I P + +PEL+LV AGYDA D +G +S + +A T LK
Sbjct: 213 CGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKKT 272
Query: 548 AQ----GRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
A G+++ +LEGGY+ ++ ++ LL + LP
Sbjct: 273 ADEVCGGKMVFSLEGGYHYLGLAESVGASLAVLLDEALP 311
Score = 275 (101.9 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 60/136 (44%), Positives = 77/136 (56%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
VD VL+GE + RPPGHHA + GFCIFNNV++ A +AL+ H L RV ++D+DV
Sbjct: 103 VDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVDFDV 162
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEGFNVNVAWNKKG 275
HHGNG Q + NDPRV YIS H+ H F S + GP N+ N+ + G
Sbjct: 163 HHGNGIQHVCLNDPRVTYISTHQIHHFPFTGDSCEDGPFQNI-------LNIPLP---AG 212
Query: 276 MSDPEYIAAFQQVILP 291
D Y F Q+I P
Sbjct: 213 CGDSHYQKVFDQLICP 228
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 285 FQQVIL-PMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V L ++AL+ H L RV ++D+DVHHGNG Q + NDPRV YIS H+ H F S
Sbjct: 136 FNNVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQIHHFPFTGDS 195
Query: 344 KDAGP 348
+ GP
Sbjct: 196 CEDGP 200
Score = 45 (20.9 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 310 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVV 369
++H GT N R+L I + HG P VG G+ EGF+ ++V
Sbjct: 12 LNHETGTHVE--NPDRLLAIMEYINTHG-LKDRLVHVEPKRVGLGELEGFHTRKYISRVE 68
Query: 370 DSVLNG 375
+ +G
Sbjct: 69 EVGFSG 74
Score = 45 (20.9 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 24/99 (24%), Positives = 39/99 (39%)
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVN------- 268
++H GT N R+L I + HG P VG G+ EGF+
Sbjct: 12 LNHETGTHVE--NPDRLLAIMEYINTHG-LKDRLVHVEPKRVGLGELEGFHTRKYISRVE 68
Query: 269 -VAWNKKGMSDPEYIAAFQQVILPMYALDN--HGLSRVL 304
V ++ G D + + + +YA+ G+ +VL
Sbjct: 69 EVGFSGGGWLDQDTVISVDSYETALYAVGGVLEGVDKVL 107
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 403 (146.9 bits), Expect = 3.7e-37, P = 3.7e-37
Identities = 89/213 (41%), Positives = 122/213 (57%)
Query: 369 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 428
VD V+ + + +RPPGHHAE D GFC+FNN+++AA +AL NHGL R+ I+D+DV
Sbjct: 104 VDEVIGKRARNAFCAVRPPGHHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDV 163
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHGNGTQA F +P+VLY+S H+Y ++P + A E G G VN+ G
Sbjct: 164 HHGNGTQAAFRRNPQVLYVSTHQYP---WYPGTGSA------EETGVGNLVNIPL-PAGT 213
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
Y A LP +F PELVL+SAG+DA +DPL ++ + Y T L LA
Sbjct: 214 DSAAYREAVTATALPAIDRFRPELVLISAGFDAHRDDPLADLALTEDDYGWITAELMKLA 273
Query: 549 Q----GRIILALEGGYNISSISYAMTLCTKALL 577
GRI+ ALEGGY + ++ + + LL
Sbjct: 274 DRHSGGRIVSALEGGYALEALGRSAAAHLRTLL 306
Score = 292 (107.8 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 66/156 (42%), Positives = 88/156 (56%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
VD V+ + + +RPPGHHAE D GFC+FNN+++AA +AL NHGL R+ I+D+DV
Sbjct: 104 VDEVIGKRARNAFCAVRPPGHHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDV 163
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQA F +P+VLY+S H+Y ++P + A E G G VN+ G
Sbjct: 164 HHGNGTQAAFRRNPQVLYVSTHQYP---WYPGTGSA------EETGVGNLVNIPL-PAGT 213
Query: 277 SDPEYIAAFQQVILPMYALDNHGLSRVLI-LDWDVH 311
Y A LP A+D VLI +D H
Sbjct: 214 DSAAYREAVTATALP--AIDRFRPELVLISAGFDAH 247
Score = 164 (62.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 39/95 (41%), Positives = 53/95 (55%)
Query: 289 ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 348
I +AL NHGL R+ I+D+DVHHGNGTQA F +P+VLY+S H+Y ++P + A
Sbjct: 142 IAAAHALANHGLQRIAIVDFDVHHGNGTQAAFRRNPQVLYVSTHQYP---WYPGTGSA-- 196
Query: 349 HNVGEGKGEGFNVNVAWNKVVDSVLNGESAHGVAI 383
E G G VN+ DS E+ A+
Sbjct: 197 ----EETGVGNLVNIPLPAGTDSAAYREAVTATAL 227
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 394 (143.8 bits), Expect = 3.8e-36, P = 3.8e-36
Identities = 88/242 (36%), Positives = 133/242 (54%)
Query: 342 HSKDAGPHNVGEGKGEGFNVNVAWNKV-VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFC 400
H D P VG G E ++ VD+VL+GE+ + ++ RPPGHH +D+ GFC
Sbjct: 101 HLGDEAP--VGPGSYEIAQLSAGLAMAAVDAVLSGEADNAYSLSRPPGHHCTRDQAMGFC 158
Query: 401 IFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPH 460
N+++A + A HGL +V ++DWDVHHGNGTQ++F VL +S+H+ D G F P
Sbjct: 159 FLANIAIAIEAAKARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQ-D-GCFPPG 216
Query: 461 SKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYD 520
G + G G G G N+N+ G Y+ A Q +++P +F PEL++V+ GYD
Sbjct: 217 Y--GGEQDRGRGAGLGCNINIPL-LPGSGHDAYLYAMQHIVIPALERFEPELIIVACGYD 273
Query: 521 ACVNDPLGGCKVSPEAYAHFTHWLK----ALAQGRIILALEGGYNISSISYAMTLCTKAL 576
A DPL + +++ T LK L +GR++L EGGY+ + + + +AL
Sbjct: 274 ANAVDPLARMLLHSDSFREMTQCLKDAAERLCRGRLVLVHEGGYSEAYVPFCGLATLEAL 333
Query: 577 LG 578
G
Sbjct: 334 SG 335
Score = 278 (102.9 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 55/135 (40%), Positives = 82/135 (60%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
VD+VL+GE+ + ++ RPPGHH +D+ GFC N+++A + A HGL +V ++DWDV
Sbjct: 127 VDAVLSGEADNAYSLSRPPGHHCTRDQAMGFCFLANIAIAIEAAKARHGLGKVAVIDWDV 186
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQ++F VL +S+H+ D G F P G + G G G G N+N+ G
Sbjct: 187 HHGNGTQSIFEERADVLTLSLHQ-D-GCFPPGY--GGEQDRGRGAGLGCNINIPL-LPGS 241
Query: 277 SDPEYIAAFQQVILP 291
Y+ A Q +++P
Sbjct: 242 GHDAYLYAMQHIVIP 256
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 298 HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGE 357
HGL +V ++DWDVHHGNGTQ++F VL +S+H+ D G F P G + G G G
Sbjct: 174 HGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQ-D-GCFPPGY--GGEQDRGRGAGL 229
Query: 358 GFNVNV 363
G N+N+
Sbjct: 230 GCNINI 235
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 386 (140.9 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 86/220 (39%), Positives = 126/220 (57%)
Query: 369 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 428
+D+V+ G + + + RPPGHHA D GFC+ N ++ ++ +GL+R+ ++DWDV
Sbjct: 127 MDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDV 186
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHGNGT+A+F +DP VL IS+H+ D+ FP D+G V +G G N+NV G
Sbjct: 187 HHGNGTEAVFLDDPGVLTISLHQ-DN--LFP--LDSGGIGV-KGAGNS-NINVPL-PPGS 238
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
Y AF+Q+++P F PEL+++ GYDA DPLG C +S E + T + LA
Sbjct: 239 GSGAYREAFEQIVIPALDAFAPELIVLPCGYDASAVDPLGVCMLSSEDFRWMTRQVMTLA 298
Query: 549 ----QGRIILALEGGYNISSISYAMTLCTKALLG--DPLP 582
QGRI++ EGGY+ + Y + L G D LP
Sbjct: 299 DKHCQGRIVVTHEGGYSPVYVPYCGLAVLEELSGASDTLP 338
Score = 273 (101.2 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 63/164 (38%), Positives = 95/164 (57%)
Query: 133 PLALSFADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNN 192
P +L A L+V G + +D+V+ G + + + RPPGHHA D GFC+ N
Sbjct: 110 PASLEIARLAVGGVIV-------AMDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLAN 162
Query: 193 VSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDA 252
++ ++ +GL+R+ ++DWDVHHGNGT+A+F +DP VL IS+H+ D+ FP D+
Sbjct: 163 AALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-DN--LFP--LDS 217
Query: 253 GPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
G V +G G N+NV G Y AF+Q+++P ALD
Sbjct: 218 GGIGV-KGAGNS-NINVPL-PPGSGSGAYREAFEQIVIP--ALD 256
Score = 164 (62.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 42/117 (35%), Positives = 65/117 (55%)
Query: 298 HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS------KDAGPHNV 351
+GL+R+ ++DWDVHHGNGT+A+F +DP VL IS+H+ D+ FP K AG N+
Sbjct: 174 YGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-DN--LFPLDSGGIGVKGAGNSNI 230
Query: 352 G----EGKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNN 404
G G G A+ ++V L+ + I+ P G+ A +P G C+ ++
Sbjct: 231 NVPLPPGSGSGA-YREAFEQIVIPALDAFAPE--LIVLPCGYDASAVDPLGVCMLSS 284
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 386 (140.9 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 86/220 (39%), Positives = 126/220 (57%)
Query: 369 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 428
+D+V+ G + + + RPPGHHA D GFC+ N ++ ++ +GL+R+ ++DWDV
Sbjct: 127 MDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDV 186
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
HHGNGT+A+F +DP VL IS+H+ D+ FP D+G V +G G N+NV G
Sbjct: 187 HHGNGTEAVFLDDPGVLTISLHQ-DN--LFP--LDSGGIGV-KGAGNS-NINVPL-PPGS 238
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
Y AF+Q+++P F PEL+++ GYDA DPLG C +S E + T + LA
Sbjct: 239 GSGAYREAFEQIVIPALDAFAPELIVLPCGYDASAVDPLGVCMLSSEDFRWMTRQVMTLA 298
Query: 549 ----QGRIILALEGGYNISSISYAMTLCTKALLG--DPLP 582
QGRI++ EGGY+ + Y + L G D LP
Sbjct: 299 DKHCQGRIVVTHEGGYSPVYVPYCGLAVLEELSGASDTLP 338
Score = 273 (101.2 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 63/164 (38%), Positives = 95/164 (57%)
Query: 133 PLALSFADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNN 192
P +L A L+V G + +D+V+ G + + + RPPGHHA D GFC+ N
Sbjct: 110 PASLEIARLAVGGVIV-------AMDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLAN 162
Query: 193 VSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDA 252
++ ++ +GL+R+ ++DWDVHHGNGT+A+F +DP VL IS+H+ D+ FP D+
Sbjct: 163 AALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-DN--LFP--LDS 217
Query: 253 GPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
G V +G G N+NV G Y AF+Q+++P ALD
Sbjct: 218 GGIGV-KGAGNS-NINVPL-PPGSGSGAYREAFEQIVIP--ALD 256
Score = 164 (62.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 42/117 (35%), Positives = 65/117 (55%)
Query: 298 HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS------KDAGPHNV 351
+GL+R+ ++DWDVHHGNGT+A+F +DP VL IS+H+ D+ FP K AG N+
Sbjct: 174 YGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-DN--LFPLDSGGIGVKGAGNSNI 230
Query: 352 G----EGKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNN 404
G G G A+ ++V L+ + I+ P G+ A +P G C+ ++
Sbjct: 231 NVPLPPGSGSGA-YREAFEQIVIPALDAFAPE--LIVLPCGYDASAVDPLGVCMLSS 284
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 377 (137.8 bits), Expect = 3.0e-34, P = 3.0e-34
Identities = 85/206 (41%), Positives = 122/206 (59%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
+ VD VL GE+ + IRPPGHHAE++ GFC+F N ++AAK+ALD+HGL RV ++D+
Sbjct: 99 RAVDMVLGGEAQNAFCAIRPPGHHAERETAMGFCLFGNAALAAKHALDHHGLRRVAVVDF 158
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
DVHHGNGTQ + +++ R L I+ + +P S P G G+ N+ +A
Sbjct: 159 DVHHGNGTQDLLWDEARALLITSQQMP---LWPGS--GRPDEDG-AHGQIVNIPLA---P 209
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
G E AA+ P F PEL+++SAG+DA +DPL S +A T L A
Sbjct: 210 GTGGAEMRAAYMAQAFPRLRAFKPELIIISAGFDAHQDDPLANLNWSTADFAWLTAELCA 269
Query: 547 LAQ----GRIILALEGGYNISSISYA 568
LAQ GRI+ LEGGY++++++ A
Sbjct: 270 LAQELCQGRIVSTLEGGYDLNALAAA 295
Score = 255 (94.8 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 44/80 (55%), Positives = 61/80 (76%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
VD VL GE+ + IRPPGHHAE++ GFC+F N ++AAK+ALD+HGL RV ++D+DV
Sbjct: 101 VDMVLGGEAQNAFCAIRPPGHHAERETAMGFCLFGNAALAAKHALDHHGLRRVAVVDFDV 160
Query: 217 HHGNGTQAMFYNDPRVLYIS 236
HHGNGTQ + +++ R L I+
Sbjct: 161 HHGNGTQDLLWDEARALLIT 180
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 330
+ALD+HGL RV ++D+DVHHGNGTQ + +++ R L I+
Sbjct: 143 HALDHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLIT 180
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 376 (137.4 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 67/122 (54%), Positives = 86/122 (70%)
Query: 167 HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 226
+G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D DVHHGNGTQ F
Sbjct: 3 NGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAF 62
Query: 227 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGMSDPEYIA 283
Y DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW M D EY+
Sbjct: 63 YADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLE 120
Query: 284 AF 285
AF
Sbjct: 121 AF 122
Score = 376 (137.4 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 67/122 (54%), Positives = 86/122 (70%)
Query: 379 HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 438
+G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D DVHHGNGTQ F
Sbjct: 3 NGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAF 62
Query: 439 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGMSDPEYIA 495
Y DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW M D EY+
Sbjct: 63 YADPSILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLE 120
Query: 496 AF 497
AF
Sbjct: 121 AF 122
Score = 250 (93.1 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 47/87 (54%), Positives = 59/87 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I Y D +S++LI+D DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S
Sbjct: 26 FNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGS 85
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKVVD 370
P+ VG G GEG+N+N+AW +D
Sbjct: 86 --GAPNEVGTGLGEGYNINIAWTGGLD 110
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 395 (144.1 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 71/138 (51%), Positives = 95/138 (68%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++ V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D
Sbjct: 760 ELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDL 819
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN-- 484
DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW
Sbjct: 820 DVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGG 877
Query: 485 -KKGMSDPEYIAAFQQVI 501
M D EY+ AF+ V+
Sbjct: 878 LDPPMGDIEYLEAFRLVL 895
Score = 394 (143.8 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 71/133 (53%), Positives = 93/133 (69%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
V +GE +G A++RPPGHHAE+ GFC FN+V++ AKY D +S++LI+D DVHHG
Sbjct: 765 VASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHG 824
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN---KKGM 276
NGTQ FY DP +LYIS+HRYD G+FFP S P+ VG G GEG+N+N+AW M
Sbjct: 825 NGTQQAFYADPNILYISLHRYDEGNFFPGS--GAPNEVGTGLGEGYNINIAWTGGLDPPM 882
Query: 277 SDPEYIAAFQQVI 289
D EY+ AF+ V+
Sbjct: 883 GDIEYLEAFRLVL 895
Score = 251 (93.4 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 47/87 (54%), Positives = 59/87 (67%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I Y D +S++LI+D DVHHGNGTQ FY DP +LYIS+HRYD G+FFP S
Sbjct: 795 FNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGS 854
Query: 344 KDAGPHNVGEGKGEGFNVNVAWNKVVD 370
P+ VG G GEG+N+N+AW +D
Sbjct: 855 --GAPNEVGTGLGEGYNINIAWTGGLD 879
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 364 (133.2 bits), Expect = 8.2e-33, P = 8.2e-33
Identities = 92/260 (35%), Positives = 128/260 (49%)
Query: 331 VHRYDHGSFFPHSKDAGPHNVGE----GKGE----GFNVNVAWNKVVDSVLNGESAHGVA 382
VH + F DAG N GE G G + + V D V++G + A
Sbjct: 54 VHSEAYLDRFKTLSDAGGGNAGEFSPFGSGSYEIAALSAGLVKRAVFD-VVDGTFDNAYA 112
Query: 383 IIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDP 442
+ RPPGHHA +D GFC+ N+++A + A GL+RV +LDWDVHHGNGTQ +FY
Sbjct: 113 LSRPPGHHAMRDGSMGFCLLANIAIAIEAARAERGLTRVAVLDWDVHHGNGTQDIFYERE 172
Query: 443 RVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVIL 502
VL IS+H+ + FP +G G G GEG N+NV G YI A ++L
Sbjct: 173 DVLTISIHQEN---CFPPGSGSGSER-GAGAGEGANLNVNL-LPGAGHQSYIDAMDILVL 227
Query: 503 PIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ----GRIILALEG 558
P + F PEL++V+ G DA DPL + + T + A GR++ A EG
Sbjct: 228 PALHAFRPELIIVACGLDANNFDPLSRMTAHSGTFGYLTRAVMGAANDLCGGRLVCAHEG 287
Query: 559 GYNISSISYAMTLCTKALLG 578
GY + + + + L G
Sbjct: 288 GYAEAVVPFCAHEVVRTLAG 307
Score = 269 (99.8 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 58/135 (42%), Positives = 78/135 (57%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
V V++G + A+ RPPGHHA +D GFC+ N+++A + A GL+RV +LDWDV
Sbjct: 99 VFDVVDGTFDNAYALSRPPGHHAMRDGSMGFCLLANIAIAIEAARAERGLTRVAVLDWDV 158
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
HHGNGTQ +FY VL IS+H+ + FP +G G G GEG N+NV G
Sbjct: 159 HHGNGTQDIFYEREDVLTISIHQEN---CFPPGSGSGSER-GAGAGEGANLNVNL-LPGA 213
Query: 277 SDPEYIAAFQQVILP 291
YI A ++LP
Sbjct: 214 GHQSYIDAMDILVLP 228
Score = 163 (62.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 34/65 (52%), Positives = 42/65 (64%)
Query: 299 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 358
GL+RV +LDWDVHHGNGTQ +FY VL IS+H+ + FP +G G G GEG
Sbjct: 147 GLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQEN---CFPPGSGSGSER-GAGAGEG 202
Query: 359 FNVNV 363
N+NV
Sbjct: 203 ANLNV 207
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 349 (127.9 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 73/194 (37%), Positives = 113/194 (58%)
Query: 369 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 428
V+ V+ G + A+ RPPGHH D P GFC+ N+++A + A L +V +LDWDV
Sbjct: 122 VEGVVQGRYRNAYALSRPPGHHCLPDWPNGFCLLANIAIAIEAAKAKGLLGKVAVLDWDV 181
Query: 429 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEGFNVNVAWNKKG 487
HHGNGT+A++Y VL IS+H+ D +PH D G + G+G G GFN+N+ G
Sbjct: 182 HHGNGTEAIYYERDDVLTISIHQ-DR--CYPH--DTGSIDDQGKGAGLGFNMNIPL-PPG 235
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 547
Y+ A +++I+P F+ +LV+++ G+DA DPL S E + T + +
Sbjct: 236 CGHNAYVEATERLIIPKLKAFDADLVIIACGFDAGGFDPLARMMCSAETFREMTRRVMQV 295
Query: 548 AQGRIILALEGGYN 561
+ G+++ A EGGY+
Sbjct: 296 SDGKLVAAHEGGYS 309
Score = 262 (97.3 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 57/142 (40%), Positives = 84/142 (59%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
V+ V+ G + A+ RPPGHH D P GFC+ N+++A + A L +V +LDWDV
Sbjct: 122 VEGVVQGRYRNAYALSRPPGHHCLPDWPNGFCLLANIAIAIEAAKAKGLLGKVAVLDWDV 181
Query: 217 HHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEGFNVNVAWNKKG 275
HHGNGT+A++Y VL IS+H+ D +PH D G + G+G G GFN+N+ G
Sbjct: 182 HHGNGTEAIYYERDDVLTISIHQ-DR--CYPH--DTGSIDDQGKGAGLGFNMNIPL-PPG 235
Query: 276 MSDPEYIAAFQQVILP-MYALD 296
Y+ A +++I+P + A D
Sbjct: 236 CGHNAYVEATERLIIPKLKAFD 257
Score = 154 (59.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 300 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEG 358
L +V +LDWDVHHGNGT+A++Y VL IS+H+ D +PH D G + G+G G G
Sbjct: 171 LGKVAVLDWDVHHGNGTEAIYYERDDVLTISIHQ-DR--CYPH--DTGSIDDQGKGAGLG 225
Query: 359 FNVNV 363
FN+N+
Sbjct: 226 FNMNI 230
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 343 (125.8 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 74/240 (30%), Positives = 128/240 (53%)
Query: 374 NGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNG 433
+G+ A+ A++RPPGHH++ + G+C NN ++A K AL++ SRV ++D DVH+GNG
Sbjct: 131 HGKIAY--ALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNG 188
Query: 434 TQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPE 492
T FY +VL +S+H +HGS+ H + +GE G G+N+NV G D
Sbjct: 189 TAEGFYTSDKVLTVSLHM-NHGSWGSSHPQKGSIDELGEDVGLGYNLNVPL-PNGTGDRG 246
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ--- 549
Y A ++++P +F P++V++ G D+ DP G ++ Y ++ +A+
Sbjct: 247 YEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHS 306
Query: 550 -GRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAY 608
GR+++ EGGY+++ +Y + + +L P P L + + + S K Y
Sbjct: 307 HGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYYPEEEANAVAAVESIKTY 366
Score = 260 (96.6 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 61/175 (34%), Positives = 98/175 (56%)
Query: 155 HVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 214
H++D +G+ A+ A++RPPGHH++ + G+C NN ++A K AL++ SRV ++D
Sbjct: 126 HILDC--HGKIAY--ALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDI 181
Query: 215 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNK 273
DVH+GNGT FY +VL +S+H +HGS+ H + +GE G G+N+NV
Sbjct: 182 DVHYGNGTAEGFYTSDKVLTVSLHM-NHGSWGSSHPQKGSIDELGEDVGLGYNLNVPL-P 239
Query: 274 KGMSDPEYIAAFQQVILPMYALDNHGLSRVLIL---DWDVHHGNGTQAMFYNDPR 325
G D Y A ++++P A+ G V+++ D NG Q++ N R
Sbjct: 240 NGTGDRGYEYAMNELVVP--AVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYR 292
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 294 ALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVG 352
AL++ SRV ++D DVH+GNGT FY +VL +S+H +HGS+ H + +G
Sbjct: 167 ALNSGSCSRVAVIDIDVHYGNGTAEGFYTSDKVLTVSLHM-NHGSWGSSHPQKGSIDELG 225
Query: 353 EGKGEGFNVNV 363
E G G+N+NV
Sbjct: 226 EDVGLGYNLNV 236
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 332 (121.9 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 93/274 (33%), Positives = 135/274 (49%)
Query: 323 DPRVLYISVHRYDHGSF-FPHSKDAGPHN--VGEGK--GEGFNVNVAWNK-----VVDSV 372
D +L ++ H +H F F ++ + G N VGE E ++ ++ VD V
Sbjct: 52 DKSLLALA-HTQEHIDFVFDNAPNEGEENFTVGEDSVMNEKTLTSIMYSAGAAVDAVDLV 110
Query: 373 LNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGN 432
+ G RPPGHHAE D+ GFC FNNV+VAA YA +GL RV I+D+DVHHGN
Sbjct: 111 MEGTLGAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGN 170
Query: 433 GTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAG--PHNVGEGKGEGF-NVNVAWNKKGMS 489
GT+ + N + + D G F S P + E N +A KG
Sbjct: 171 GTEDIITNH----FNATPEDDKGYLFCSSYQYPLYPFEIQESDTPPIINTPLAATTKGEQ 226
Query: 490 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 549
E + A LP ++F PEL+L+SAG+DA + D + ++ Y T LK +A+
Sbjct: 227 FREKLTAHW---LPALHKFKPELILISAGFDAHIEDEMSHVSLTEADYRWITDELKIIAE 283
Query: 550 ----GRIILALEGGYNISSISYAMTLCTKALLGD 579
GRI+ LEGGY S++ ++ L+G+
Sbjct: 284 EYGKGRIVSVLEGGYAPSALGRSVVAHVNGLIGN 317
Score = 216 (81.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 40/72 (55%), Positives = 48/72 (66%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
VD V+ G RPPGHHAE D+ GFC FNNV+VAA YA +GL RV I+D+DV
Sbjct: 107 VDLVMEGTLGAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDV 166
Query: 217 HHGNGTQAMFYN 228
HHGNGT+ + N
Sbjct: 167 HHGNGTEDIITN 178
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 332 (121.9 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 93/274 (33%), Positives = 135/274 (49%)
Query: 323 DPRVLYISVHRYDHGSF-FPHSKDAGPHN--VGEGK--GEGFNVNVAWNK-----VVDSV 372
D +L ++ H +H F F ++ + G N VGE E ++ ++ VD V
Sbjct: 52 DKSLLALA-HTQEHIDFVFDNAPNEGEENFTVGEDSVMNEKTLTSIMYSAGAAVDAVDLV 110
Query: 373 LNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGN 432
+ G RPPGHHAE D+ GFC FNNV+VAA YA +GL RV I+D+DVHHGN
Sbjct: 111 MEGTLGAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGN 170
Query: 433 GTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAG--PHNVGEGKGEGF-NVNVAWNKKGMS 489
GT+ + N + + D G F S P + E N +A KG
Sbjct: 171 GTEDIITNH----FNATPEDDKGYLFCSSYQYPLYPFEIQESDTPPIINTPLAATTKGEQ 226
Query: 490 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 549
E + A LP ++F PEL+L+SAG+DA + D + ++ Y T LK +A+
Sbjct: 227 FREKLTAHW---LPALHKFKPELILISAGFDAHIEDEMSHVSLTEADYRWITDELKIIAE 283
Query: 550 ----GRIILALEGGYNISSISYAMTLCTKALLGD 579
GRI+ LEGGY S++ ++ L+G+
Sbjct: 284 EYGKGRIVSVLEGGYAPSALGRSVVAHVNGLIGN 317
Score = 216 (81.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 40/72 (55%), Positives = 48/72 (66%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDV 216
VD V+ G RPPGHHAE D+ GFC FNNV+VAA YA +GL RV I+D+DV
Sbjct: 107 VDLVMEGTLGAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDV 166
Query: 217 HHGNGTQAMFYN 228
HHGNGT+ + N
Sbjct: 167 HHGNGTEDIITN 178
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 324 (119.1 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 55/104 (52%), Positives = 80/104 (76%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VDSV++G+ +G+A++RPPGHH++++ GFC+FNNV++AA+YA +GL R+LI+DW
Sbjct: 114 QLVDSVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEYAKLKYGLQRILIVDW 173
Query: 427 DVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 470
DVHHG GTQ +F DP VLY S HRY+H F+P K++ VG
Sbjct: 174 DVHHGQGTQYIFEEDPSVLYFSWHRYEHQEFWPSLKESDYDAVG 217
Score = 323 (118.8 bits), Expect = 2.5e-28, P = 2.5e-28
Identities = 55/103 (53%), Positives = 79/103 (76%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VDSV++G+ +G+A++RPPGHH++++ GFC+FNNV++AA+YA +GL R+LI+DWD
Sbjct: 115 LVDSVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEYAKLKYGLQRILIVDWD 174
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 258
VHHG GTQ +F DP VLY S HRY+H F+P K++ VG
Sbjct: 175 VHHGQGTQYIFEEDPSVLYFSWHRYEHQEFWPSLKESDYDAVG 217
Score = 181 (68.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 36/69 (52%), Positives = 44/69 (63%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS 343
F V I YA +GL R+LI+DWDVHHG GTQ +F DP VLY S HRY+H F+P
Sbjct: 149 FNNVAIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYFSWHRYEHQEFWPSL 208
Query: 344 KDAGPHNVG 352
K++ VG
Sbjct: 209 KESDYDAVG 217
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 321 (118.1 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 74/216 (34%), Positives = 114/216 (52%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDE--PCGFCIFNNVSVAAKYALDNHGLSRVLIL 424
++ + +L GE +G A++RPPGHHA + GFC NNV++ Y G+ ++ I+
Sbjct: 85 ELAERILAGEVKNGFALVRPPGHHATRTVYGNRGFCNINNVAITVDYLRWVKGVKKIAII 144
Query: 425 DWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWN 484
D DVHHG+GTQ +FY+DP VL+IS+H+ D + +P + G G +N+
Sbjct: 145 DTDVHHGDGTQDIFYHDPDVLFISLHQ-DGRTLYPGTGFID--EAGTPNAYGTTINLPL- 200
Query: 485 KKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
G D E + ++ +LPI +F PE ++ SAG D +DPL V+ Y T +
Sbjct: 201 PPGSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLARMAVTARGYGRITELI 260
Query: 545 KALAQGRIILALEGGYNIS-SISYAMTLCTKALLGD 579
K + LEGGY+I ++ Y AL G+
Sbjct: 261 KP-----DLAVLEGGYSIEGALPYVNLAILLALYGE 291
Score = 230 (86.0 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 49/139 (35%), Positives = 78/139 (56%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDE--PCGFCIFNNVSVAAKYALDNHGLSRVLILD 213
+ + +L GE +G A++RPPGHHA + GFC NNV++ Y G+ ++ I+D
Sbjct: 86 LAERILAGEVKNGFALVRPPGHHATRTVYGNRGFCNINNVAITVDYLRWVKGVKKIAIID 145
Query: 214 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 273
DVHHG+GTQ +FY+DP VL+IS+H+ D + +P + G G +N+
Sbjct: 146 TDVHHGDGTQDIFYHDPDVLFISLHQ-DGRTLYPGTGFID--EAGTPNAYGTTINLPL-P 201
Query: 274 KGMSDPEYIAAFQQVILPM 292
G D E + ++ +LP+
Sbjct: 202 PGSGDEEILYLLEEAVLPI 220
Score = 127 (49.8 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 299 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP 341
G+ ++ I+D DVHHG+GTQ +FY+DP VL+IS+H+ D + +P
Sbjct: 137 GVKKIAIIDTDVHHGDGTQDIFYHDPDVLFISLHQ-DGRTLYP 178
>DICTYBASE|DDB_G0280195 [details] [associations]
symbol:hdaC "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
Length = 1704
Score = 343 (125.8 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 82/226 (36%), Positives = 122/226 (53%)
Query: 369 VDSVLNGESAHGVAIIRPPGHHAEQ-----DEPC-GFCIFNNVSVAAKYALDNHGLSRVL 422
VDSV IRPPGHHA + D P G+C+ NNV++ AKYA G SR+
Sbjct: 1192 VDSVSRSGYTRAFCAIRPPGHHAGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRIA 1251
Query: 423 ILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFF-PHS-KDAGPHNVGEGKGEGFNVN 480
++D+DVHHGNGTQ + D L+IS+H D +F P + +D G + G+ +G +N
Sbjct: 1252 VVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDGNILN 1311
Query: 481 VAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHF 540
+ K+ ++ + I+P + P+L+ +SAG+D +DP G K++ E Y
Sbjct: 1312 IGL-KRNTGSAVFLQQWMNKIIPRLEAYKPQLIFLSAGFDGHKDDPTNGLKLNEEDYFVI 1370
Query: 541 THWLKALA----QGRIILALEGGYNI---SSISYAMTLCTKALLGD 579
T +K +A +GRII LEGGY I +S+ + KAL+ D
Sbjct: 1371 TKMIKTVAFKYCKGRIISVLEGGYGIEKTNSLQRCVNSHLKALIED 1416
Score = 228 (85.3 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 58/175 (33%), Positives = 87/175 (49%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQ-----DEPC-GFCIFNNVSVAAKYALDNHGLSRVL 210
VDSV IRPPGHHA + D P G+C+ NNV++ AKYA G SR+
Sbjct: 1192 VDSVSRSGYTRAFCAIRPPGHHAGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRIA 1251
Query: 211 ILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFF-PHS-KDAGPHNVGEGKGEGFNVN 268
++D+DVHHGNGTQ + D L+IS+H D +F P + +D G + G+ +G +N
Sbjct: 1252 VVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDGNILN 1311
Query: 269 VAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYND 323
+ K+ ++ + I+P L L +D H + T + N+
Sbjct: 1312 IGL-KRNTGSAVFLQQWMNKIIPRLEAYKPQLI-FLSAGFDGHKDDPTNGLKLNE 1364
Score = 38 (18.4 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 261 KGEGFNVNVAWNKKGMSDPEYIAAFQQVILP--MYAL 295
K V++ K G+SD E QQ L +YAL
Sbjct: 943 KSSELKVDMLLIKNGISDKEKETKSQQATLENEIYAL 979
>UNIPROTKB|Q4K950 [details] [associations]
symbol:aphA_2 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
Uniprot:Q4K950
Length = 341
Score = 302 (111.4 bits), Expect = 4.9e-26, P = 4.9e-26
Identities = 68/195 (34%), Positives = 111/195 (56%)
Query: 371 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHH 430
++L+GE A A+ RPPGHHA + GFC NN ++AA+ D + +RV +LD D+HH
Sbjct: 139 ALLDGEPA-AYALCRPPGHHARSEAAGGFCYLNNAAIAAQVLRDKY--ARVAVLDTDMHH 195
Query: 431 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 490
G G Q +FY VLY+SVH D +F+P G G GEG+N+N+ G S+
Sbjct: 196 GQGIQEIFYERADVLYVSVHG-DPTNFYPGVAGFAEER-GAGAGEGYNLNLPM-AHGASE 252
Query: 491 PEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQG 550
+++A +Q + + F+ E++++S G+D DP V+ + +A +++L
Sbjct: 253 GDFLARLEQALEAVK-AFDAEVLVLSLGFDIYELDPQSKVAVTRDGFAILGQRIRSLGLP 311
Query: 551 RIILALEGGYNISSI 565
+I+ EGGY++ S+
Sbjct: 312 CLIVQ-EGGYHLESL 325
Score = 260 (96.6 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 59/153 (38%), Positives = 88/153 (57%)
Query: 159 SVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHH 218
++L+GE A A+ RPPGHHA + GFC NN ++AA+ D + +RV +LD D+HH
Sbjct: 139 ALLDGEPA-AYALCRPPGHHARSEAAGGFCYLNNAAIAAQVLRDKY--ARVAVLDTDMHH 195
Query: 219 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 278
G G Q +FY VLY+SVH D +F+P G G GEG+N+N+ G S+
Sbjct: 196 GQGIQEIFYERADVLYVSVHG-DPTNFYPGVAGFAEER-GAGAGEGYNLNLPM-AHGASE 252
Query: 279 PEYIAAFQQVILPMYALDNHGLSRVLILDWDVH 311
+++A +Q + + A D L VL L +D++
Sbjct: 253 GDFLARLEQALEAVKAFDAEVL--VLSLGFDIY 283
Score = 135 (52.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
+RV +LD D+HHG G Q +FY VLY+SVH D +F+P G G GEG+N
Sbjct: 184 ARVAVLDTDMHHGQGIQEIFYERADVLYVSVHG-DPTNFYPGVAGFAEER-GAGAGEGYN 241
Query: 361 VNV 363
+N+
Sbjct: 242 LNL 244
>UNIPROTKB|Q4K3I0 [details] [associations]
symbol:aphA_3 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
Uniprot:Q4K3I0
Length = 343
Score = 290 (107.1 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 80/232 (34%), Positives = 112/232 (48%)
Query: 336 HGSFFPHSKDAG-PHNVGEGKGEGFNVNVAWNKVVDSVLNGESAHGV-AIIRPPGHHAEQ 393
HG +S D G P G + VA + NG AH A+ RPPGHHA
Sbjct: 106 HGQLGYYSFDGGAPITAGTWQAAYSAAQVALTAQAH-IQNG--AHSAFALCRPPGHHAAG 162
Query: 394 DEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYD 453
D G+C NN ++AA+ LD G +V ILD D HHGNGTQ++FY VL+ S+H +
Sbjct: 163 DLMGGYCYLNNAAIAAQAFLDQ-GHRKVAILDVDYHHGNGTQSIFYERSDVLFTSIHGHP 221
Query: 454 HGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELV 513
F P GEG GEGFN N G + AA +Q I +++ +++
Sbjct: 222 EAEF-PFFLGYADE-CGEGAGEGFNFNYPL-AAGSGWDAWSAALEQACNEIQ-RYDADII 277
Query: 514 LVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSI 565
+VS G D +DP+ K+ Y + AL + + + +EGGY + I
Sbjct: 278 VVSLGVDTFKDDPISQFKLDSPDYLAMGKRIAALGKPTLFV-MEGGYAVEEI 328
Score = 225 (84.3 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 51/110 (46%), Positives = 63/110 (57%)
Query: 160 VLNGESAHGV-AIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHH 218
+ NG AH A+ RPPGHHA D G+C NN ++AA+ LD G +V ILD D HH
Sbjct: 142 IQNG--AHSAFALCRPPGHHAAGDLMGGYCYLNNAAIAAQAFLDQ-GHRKVAILDVDYHH 198
Query: 219 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVN 268
GNGTQ++FY VL+ S+H + F P GEG GEGFN N
Sbjct: 199 GNGTQSIFYERSDVLFTSIHGHPEAEF-PFFLGYADE-CGEGAGEGFNFN 246
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 30/66 (45%), Positives = 37/66 (56%)
Query: 297 NHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKG 356
+ G +V ILD D HHGNGTQ++FY VL+ S+H + F P GEG G
Sbjct: 183 DQGHRKVAILDVDYHHGNGTQSIFYERSDVLFTSIHGHPEAEF-PFFLGYADE-CGEGAG 240
Query: 357 EGFNVN 362
EGFN N
Sbjct: 241 EGFNFN 246
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 290 (107.1 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 73/203 (35%), Positives = 107/203 (52%)
Query: 370 DSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVH 429
D ++ GE + V + RPPGHHA D GFC NN ++AA+ L GL R ILD DVH
Sbjct: 139 DLIIQGERSAYV-LSRPPGHHAFGDLAGGFCFLNNSAIAAE-RLRAAGL-RPAILDIDVH 195
Query: 430 HGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 489
HGNGTQ +FY VL +S+H D F+P G G+G G+N+N+ +G
Sbjct: 196 HGNGTQGIFYERDDVLTVSIHA-DPARFYPFFWGHAQER-GAGRGLGYNLNLPL-ARGTG 252
Query: 490 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 549
D +Y+ + +A F +++V+ G DA ++DP G ++ + +A ALA
Sbjct: 253 DDDYLDTLSVALRQVA-SFGSRVLVVALGLDASIDDPFQGLAITQDGFARIG---AALAG 308
Query: 550 GRI--ILALEGGYNISSISYAMT 570
R+ + EGGY S+ +T
Sbjct: 309 TRVPVLFVQEGGYLCDSLGDTLT 331
Score = 225 (84.3 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 61/149 (40%), Positives = 82/149 (55%)
Query: 158 DSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVH 217
D ++ GE + V + RPPGHHA D GFC NN ++AA+ L GL R ILD DVH
Sbjct: 139 DLIIQGERSAYV-LSRPPGHHAFGDLAGGFCFLNNSAIAAE-RLRAAGL-RPAILDIDVH 195
Query: 218 HGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 277
HGNGTQ +FY VL +S+H D F+P G G+G G+N+N+ +G
Sbjct: 196 HGNGTQGIFYERDDVLTVSIHA-DPARFYPFFWGHAQER-GAGRGLGYNLNLPL-ARGTG 252
Query: 278 DPEYIAAFQQVILPMYALDNHGLSRVLIL 306
D +Y+ V L A + G SRVL++
Sbjct: 253 DDDYLDTLS-VALRQVA--SFG-SRVLVV 277
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/65 (46%), Positives = 38/65 (58%)
Query: 299 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 358
GL R ILD DVHHGNGTQ +FY VL +S+H D F+P G G+G G
Sbjct: 184 GL-RPAILDIDVHHGNGTQGIFYERDDVLTVSIHA-DPARFYPFFWGHAQER-GAGRGLG 240
Query: 359 FNVNV 363
+N+N+
Sbjct: 241 YNLNL 245
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 295 (108.9 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 86/294 (29%), Positives = 143/294 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 44 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 100
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ A V +V + +A+ G HHA++ E GFC N++ +A
Sbjct: 101 PVFDGLFEFCQLS-AGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLA 159
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 160 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 213
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y A F+ VI + F P V++ G D+ D LG
Sbjct: 214 IGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLG 272
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 273 CFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 208 (78.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 49/143 (34%), Positives = 75/143 (52%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +A+ G HHA++ E GFC N++ +A L H
Sbjct: 110 CQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 167
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VN + G+ D Y A F+ VI
Sbjct: 224 VNYPL-RDGIDDESYEAIFKPVI 245
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 291 (107.5 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 83/294 (28%), Positives = 142/294 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 45 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 101
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V + +AI G HHA++ E GFC N++ +A
Sbjct: 102 PVFDGLFEFCQLSTG-GSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLA 160
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 161 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 214
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y A F+ ++ + + P V++ G D+ D LG
Sbjct: 215 IGAGKGKYYAVNYPL-RDGIDDESYEAIFKPIMSKVMEMYQPSAVVLQCGADSLSGDRLG 273
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 274 CFNLTIKGHAKCVEYMKSFNLPLLMLG-GGGYTIKNVARCWTFETAVALDSTIP 326
Score = 206 (77.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 50/150 (33%), Positives = 78/150 (52%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +AI G HHA++ E GFC N++ +A L H
Sbjct: 111 CQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 168
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 169 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 224
Query: 267 VNVAWNKKGMSDPEYIAAFQQV---ILPMY 293
VN + G+ D Y A F+ + ++ MY
Sbjct: 225 VNYPL-RDGIDDESYEAIFKPIMSKVMEMY 253
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 291 (107.5 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 84/294 (28%), Positives = 142/294 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 44 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 100
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V + +A+ G HHA++ E GFC N++ +A
Sbjct: 101 PVFDGLFEFCQLSTG-GSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLA 159
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 160 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 213
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D LG
Sbjct: 214 IGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 272
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 273 CFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 48/143 (33%), Positives = 75/143 (52%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +A+ G HHA++ E GFC N++ +A L H
Sbjct: 110 CQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 167
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VN + G+ D Y A F+ V+
Sbjct: 224 VNYPL-RDGIDDESYEAIFKPVM 245
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 291 (107.5 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 84/294 (28%), Positives = 142/294 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 44 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 100
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V + +A+ G HHA++ E GFC N++ +A
Sbjct: 101 PVFDGLFEFCQLSTG-GSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLA 159
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 160 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 213
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D LG
Sbjct: 214 IGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 272
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 273 CFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 48/143 (33%), Positives = 75/143 (52%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +A+ G HHA++ E GFC N++ +A L H
Sbjct: 110 CQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 167
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VN + G+ D Y A F+ V+
Sbjct: 224 VNYPL-RDGIDDESYEAIFKPVM 245
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 291 (107.5 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 84/294 (28%), Positives = 142/294 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 44 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 100
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V + +A+ G HHA++ E GFC N++ +A
Sbjct: 101 PVFDGLFEFCQLSTG-GSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLA 159
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 160 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 213
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D LG
Sbjct: 214 IGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 272
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 273 CFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 48/143 (33%), Positives = 75/143 (52%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +A+ G HHA++ E GFC N++ +A L H
Sbjct: 110 CQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 167
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VN + G+ D Y A F+ V+
Sbjct: 224 VNYPL-RDGIDDESYEAIFKPVM 245
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 291 (107.5 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 84/294 (28%), Positives = 142/294 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 44 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 100
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V + +A+ G HHA++ E GFC N++ +A
Sbjct: 101 PVFDGLFEFCQLSTG-GSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLA 159
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 160 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 213
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D LG
Sbjct: 214 IGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 272
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 273 CFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 325
Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 48/143 (33%), Positives = 75/143 (52%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +A+ G HHA++ E GFC N++ +A L H
Sbjct: 110 CQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 167
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VN + G+ D Y A F+ V+
Sbjct: 224 VNYPL-RDGIDDESYEAIFKPVM 245
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 288 (106.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 85/295 (28%), Positives = 142/295 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 44 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 100
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V + +A+ G HHA++ E GFC N++ +A
Sbjct: 101 PVFDGLFEFCQLSTG-GSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLA 159
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 160 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 213
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D LG
Sbjct: 214 IGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 272
Query: 529 GCKVS-PEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ E +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 273 CFNLTIKEGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 326
Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 48/143 (33%), Positives = 75/143 (52%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +A+ G HHA++ E GFC N++ +A L H
Sbjct: 110 CQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 167
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VN + G+ D Y A F+ V+
Sbjct: 224 VNYPL-RDGIDDESYEAIFKPVM 245
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 288 (106.4 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 85/295 (28%), Positives = 142/295 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 44 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 100
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V + +A+ G HHA++ E GFC N++ +A
Sbjct: 101 PVFDGLFEFCQLSTG-GSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLA 159
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 160 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 213
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D LG
Sbjct: 214 IGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 272
Query: 529 GCKVS-PEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ E +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 273 CFNLTIKEGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 326
Score = 205 (77.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 48/143 (33%), Positives = 75/143 (52%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +A+ G HHA++ E GFC N++ +A L H
Sbjct: 110 CQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 167
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VN + G+ D Y A F+ V+
Sbjct: 224 VNYPL-RDGIDDESYEAIFKPVM 245
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 288 (106.4 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 85/295 (28%), Positives = 142/295 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 44 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 100
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V + +A+ G HHA++ E GFC N++ +A
Sbjct: 101 PVFDGLFEFCQLSTG-GSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLA 159
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 160 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 213
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D LG
Sbjct: 214 IGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 272
Query: 529 GCKVS-PEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ E +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 273 CFNLTIKEGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 326
Score = 205 (77.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 48/143 (33%), Positives = 75/143 (52%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +A+ G HHA++ E GFC N++ +A L H
Sbjct: 110 CQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 167
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 168 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 223
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VN + G+ D Y A F+ V+
Sbjct: 224 VNYPL-RDGIDDESYEAIFKPVM 245
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 283 (104.7 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 68/198 (34%), Positives = 103/198 (52%)
Query: 383 IIRPPG--HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYN 440
+I PG HHA++ E GFC N++ + L H RVL +D D+HHG+G Q F N
Sbjct: 153 VINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYH--KRVLYIDIDIHHGDGVQEAFNN 210
Query: 441 DPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQV 500
RV+ +S HR+ G +FP S VG GK F +NV + D Y+ F+ V
Sbjct: 211 SDRVMTVSFHRF--GQYFPGSGSIMDKGVGPGKY--FAINVPL-MAAIRDEPYLKLFESV 265
Query: 501 ILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGY 560
I + FNPE +++ G D+ D LG +S A+A ++K+L + ++L GGY
Sbjct: 266 ISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMVLG-GGGY 324
Query: 561 NISSISYAMTLCTKALLG 578
+ +++ L T +LG
Sbjct: 325 TLRNVARCWALETGVILG 342
Score = 208 (78.3 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 74/221 (33%), Positives = 100/221 (45%)
Query: 72 VMYVNPMSIIITEHPLALSFADLSVWCYVCEAYVDNHLLALLIYLYGVMY--VKPMSIII 129
V Y P + + E P L AD+SV + E YV N L + L M V I
Sbjct: 63 VSYEMPKYMTVVESP-KLDAADISV--FHTEDYV-NFLQTVTPKLGLTMPDDVLRQFNIG 118
Query: 130 TEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFC 188
+ P+ FA L W Y C Y V + + + I P G HHA++ E GFC
Sbjct: 119 EDCPI---FAGL--WDY-CTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFC 172
Query: 189 IFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPH 248
N++ + L H RVL +D D+HHG+G Q F N RV+ +S HR+ G +FP
Sbjct: 173 YVNDIVLGILELLKYH--KRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRF--GQYFPG 228
Query: 249 SKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
S VG GK F +NV + D Y+ F+ VI
Sbjct: 229 SGSIMDKGVGPGKY--FAINVPL-MAAIRDEPYLKLFESVI 266
Score = 139 (54.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 42/121 (34%), Positives = 63/121 (52%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q F N RV+ +S HR+ G +FP S VG GK NV
Sbjct: 190 RVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRF--GQYFPGSGSIMDKGVGPGKYFAINV 247
Query: 362 NVA-------WNKVVDSVLNG--ESAHGVAIIRPPGHHAEQDEPCG-FCI-FNNVSVAAK 410
+ + K+ +SV++G E+ + AI+ G + ++ G F + FN + A K
Sbjct: 248 PLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVK 307
Query: 411 Y 411
Y
Sbjct: 308 Y 308
Score = 47 (21.6 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 562 ISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSHKAYWSSLKFLVALPEN 621
++SI C + + G P +++ + I + I+E K+ SS+++ V
Sbjct: 381 LASIEKETLACLRMIRGAPSVQMQNIVGIRLDEIEQIEENERLQKSSKSSIEYEVGKVSE 440
Query: 622 KL 623
K+
Sbjct: 441 KM 442
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 268 (99.4 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 63/184 (34%), Positives = 96/184 (52%)
Query: 382 AIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYND 441
A+ RPPGHHA ++ G+C NN ++AA++A+ G RV +LD D HHGNGTQ +FY+
Sbjct: 151 ALCRPPGHHAAREYMGGYCYLNNAAIAAQHAI-TRGARRVAVLDVDFHHGNGTQNIFYDR 209
Query: 442 PRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 501
VL++S+H D +P+ G G GEG N+N+ K S Y A +
Sbjct: 210 GDVLFVSLHG-DPAVSYPYFSGHASER-GSGAGEGCNLNLPL-PKNTSWQHYRQALELAC 266
Query: 502 LPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYN 561
+ F PEL++VS G D +DP+ + E + + + + + +EGGY
Sbjct: 267 KQLR-AFAPELLVVSLGVDTFKDDPISHFLLESEDFLGMGQIIATVGTPTLFV-MEGGYM 324
Query: 562 ISSI 565
+ I
Sbjct: 325 VDEI 328
Score = 217 (81.4 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 43/100 (43%), Positives = 62/100 (62%)
Query: 170 AIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYND 229
A+ RPPGHHA ++ G+C NN ++AA++A+ G RV +LD D HHGNGTQ +FY+
Sbjct: 151 ALCRPPGHHAAREYMGGYCYLNNAAIAAQHAI-TRGARRVAVLDVDFHHGNGTQNIFYDR 209
Query: 230 PRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 269
VL++S+H D +P+ G G GEG N+N+
Sbjct: 210 GDVLFVSLHG-DPAVSYPYFSGHASER-GSGAGEGCNLNL 247
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 289 ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP 348
I +A+ G RV +LD D HHGNGTQ +FY+ VL++S+H D +P+
Sbjct: 176 IAAQHAI-TRGARRVAVLDVDFHHGNGTQNIFYDRGDVLFVSLHG-DPAVSYPYFSGHAS 233
Query: 349 HNVGEGKGEGFNVNV 363
G G GEG N+N+
Sbjct: 234 ER-GSGAGEGCNLNL 247
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 282 (104.3 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 83/295 (28%), Positives = 142/295 (48%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H N + +++D + ++ R D+ S +SK NVGE
Sbjct: 49 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 105
Query: 354 ----GKGEGFNVNVAWNKVVDSVLN-GESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSV 407
G E ++ + S + + +A+ G HHA++ E GFC N++ +
Sbjct: 106 PVFDGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVL 165
Query: 408 AAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPH 467
A L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D
Sbjct: 166 AILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--R 219
Query: 468 NVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPL 527
++G GKG+ + VN + G+ D Y A F+ V+ + F P V++ G D+ D L
Sbjct: 220 DIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 278
Query: 528 GGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
G ++ + +A ++K+ ++L GGY I +++ T T L +P
Sbjct: 279 GCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIP 332
Score = 202 (76.2 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 43/113 (38%), Positives = 65/113 (57%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 147 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 204
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+
Sbjct: 205 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 252
>DICTYBASE|DDB_G0279267 [details] [associations]
symbol:hdaD "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
Length = 1489
Score = 215 (80.7 bits), Expect = 7.9e-22, Sum P(2) = 7.9e-22
Identities = 43/118 (36%), Positives = 66/118 (55%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQD------EPCGFCIFNNVSVAAKYALDNHGLSR 420
+ +D+V+ G RPPGHHA +D GFC+ N+V + AKYA + L +
Sbjct: 1209 QAIDNVMKGNVTSAFVAARPPGHHAGRDGLTSGTSSQGFCLLNHVCIGAKYAQLKYNLDK 1268
Query: 421 VLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 478
+ I+D+DVHHGNGT+ + ND ++S+H ++ G F+P S G ++G FN
Sbjct: 1269 IAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG-FYPGS-GGGVGSIGVVNLNEFN 1324
Score = 214 (80.4 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 43/116 (37%), Positives = 65/116 (56%)
Query: 157 VDSVLNGESAHGVAIIRPPGHHAEQD------EPCGFCIFNNVSVAAKYALDNHGLSRVL 210
+D+V+ G RPPGHHA +D GFC+ N+V + AKYA + L ++
Sbjct: 1211 IDNVMKGNVTSAFVAARPPGHHAGRDGLTSGTSSQGFCLLNHVCIGAKYAQLKYNLDKIA 1270
Query: 211 ILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
I+D+DVHHGNGT+ + ND ++S+H ++ G F+P S G ++G FN
Sbjct: 1271 IIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG-FYPGS-GGGVGSIGVVNLNEFN 1324
Score = 131 (51.2 bits), Expect = 7.9e-22, Sum P(2) = 7.9e-22
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 475 EGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSP 534
+G VN+ + K S ++ AF +I+ + PEL+L+S G+DA + D L +
Sbjct: 1382 KGNIVNIPLDPKS-SASSFLKAFS-IIIDKLNDYQPELILISCGFDAHMEDHLASLCLLE 1439
Query: 535 EAYAHFTHWLKALA----QGRIILALEGGYNISSISYAMTLCTKALL 577
E Y T L+ +A +GR++ LEGGYNI+ A+ CT A L
Sbjct: 1440 ENYVEITRSLRRVADRWCKGRLVSILEGGYNIN----ALRQCTIAHL 1482
Score = 126 (49.4 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVG 352
YA + L ++ I+D+DVHHGNGT+ + ND ++S+H ++ G F+P S G ++G
Sbjct: 1259 YAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG-FYPGS-GGGVGSIG 1316
Query: 353 EGKGEGFN 360
FN
Sbjct: 1317 VVNLNEFN 1324
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 276 (102.2 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 73/213 (34%), Positives = 110/213 (51%)
Query: 373 LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
LN +A +AI G HHA++ E GFC N++++AA L H RVL +D DVHHG
Sbjct: 121 LNSGNAE-IAINWAGGLHHAKKREASGFCYVNDIALAALELLKYH--QRVLYIDIDVHHG 177
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFP---HSKDAGPHNVGEGKGEGFNVNVAWNKKGM 488
+G + FY RV+ S H++ G +FP H KD G +G GK NV + + G+
Sbjct: 178 DGVEEFFYTTDRVMTCSFHKF--GEYFPGTGHIKDTG---IGTGKNYAVNVPL---RDGI 229
Query: 489 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 548
D Y + F+ VI I F PE V++ G D+ D LG +S + ++ ++K+
Sbjct: 230 DDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFN 289
Query: 549 QGRIILALEGGYNISSISYAMTLCTKALLGDPL 581
I + GGY + +++ T T L G+ L
Sbjct: 290 LPMICVG-GGGYTVRNVARVWTYETGLLAGEEL 321
Score = 202 (76.2 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 52/133 (39%), Positives = 73/133 (54%)
Query: 161 LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
LN +A +AI G HHA++ E GFC N++++AA L H RVL +D DVHHG
Sbjct: 121 LNSGNAE-IAINWAGGLHHAKKREASGFCYVNDIALAALELLKYH--QRVLYIDIDVHHG 177
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFP---HSKDAGPHNVGEGKGEGFNVNVAWNKKGM 276
+G + FY RV+ S H++ G +FP H KD G +G GK NV + + G+
Sbjct: 178 DGVEEFFYTTDRVMTCSFHKF--GEYFPGTGHIKDTG---IGTGKNYAVNVPL---RDGI 229
Query: 277 SDPEYIAAFQQVI 289
D Y + F+ VI
Sbjct: 230 DDESYESVFKPVI 242
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFP---HSKDAGPHNVGEGKGEG 358
RVL +D DVHHG+G + FY RV+ S H++ G +FP H KD G +G GK
Sbjct: 166 RVLYIDIDVHHGDGVEEFFYTTDRVMTCSFHKF--GEYFPGTGHIKDTG---IGTGKNYA 220
Query: 359 FNV 361
NV
Sbjct: 221 VNV 223
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 271 (100.5 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 62/194 (31%), Positives = 101/194 (52%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 50 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 107
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+ + F
Sbjct: 108 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVMEMF 162
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P V++ G D+ D LG ++ + +A ++K+ ++L GGY I +++
Sbjct: 163 QPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVARC 221
Query: 569 MTLCTKALLGDPLP 582
T T L +P
Sbjct: 222 WTYETAVALDTEIP 235
Score = 202 (76.2 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 43/113 (38%), Positives = 65/113 (57%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 50 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 107
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+
Sbjct: 108 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 155
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ + V
Sbjct: 79 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYAV 134
Query: 362 NVAWNKVVD 370
N +D
Sbjct: 135 NYPLRDGID 143
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 269 (99.8 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 72/212 (33%), Positives = 106/212 (50%)
Query: 373 LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
L E + +A G HHA + + GF N+ VA L+ GL RV LD D HHG
Sbjct: 117 LVAEEGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEK-GL-RVAYLDIDAHHG 174
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGS-FFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 490
+G Q FY+ RVL IS+H + G FFP + G G G G G++VN+ D
Sbjct: 175 DGVQEAFYDTDRVLTISIH--ESGMYFFPGTGFEG--ETGTGAGTGYSVNIPLVAHA-DD 229
Query: 491 PEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQG 550
++ AF +V P+ +NP++++ G D DPL +V+ +Y + LKAL
Sbjct: 230 ALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGIP 289
Query: 551 RIILALEGGYNISSISYAMTLCTKALLGDPLP 582
+ + GGYN+ +++ A TL + G LP
Sbjct: 290 WVAVG-GGGYNLVNVARAWTLAWGVMNGVELP 320
Score = 196 (74.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 76/221 (34%), Positives = 101/221 (45%)
Query: 161 LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
L E + +A G HHA + + GF N+ VA L+ GL RV LD D HHG
Sbjct: 117 LVAEEGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEK-GL-RVAYLDIDAHHG 174
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGS-FFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 278
+G Q FY+ RVL IS+H + G FFP + G G G G G++VN+ D
Sbjct: 175 DGVQEAFYDTDRVLTISIH--ESGMYFFPGTGFEG--ETGTGAGTGYSVNIPLVAHA-DD 229
Query: 279 PEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRV-LYISVHRYDHG 337
++ AF +V P+ A N VL+ G T F DP L ++ H Y +
Sbjct: 230 ALFMKAFDEVAFPLLAAYNPD---VLVTQL----GADT---FRTDPLTRLEVTTHSYTY- 278
Query: 338 SFFPHSKDAGPHNVGEGKGEGFN-VNVA--WNKVVDSVLNG 375
K G V G G G+N VNVA W + V+NG
Sbjct: 279 -ILRKLKALGIPWVAVGGG-GYNLVNVARAWT-LAWGVMNG 316
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 269 (99.8 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 72/212 (33%), Positives = 106/212 (50%)
Query: 373 LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
L E + +A G HHA + + GF N+ VA L+ GL RV LD D HHG
Sbjct: 117 LVAEEGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEK-GL-RVAYLDIDAHHG 174
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGS-FFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 490
+G Q FY+ RVL IS+H + G FFP + G G G G G++VN+ D
Sbjct: 175 DGVQEAFYDTDRVLTISIH--ESGMYFFPGTGFEG--ETGTGAGTGYSVNIPLVAHA-DD 229
Query: 491 PEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQG 550
++ AF +V P+ +NP++++ G D DPL +V+ +Y + LKAL
Sbjct: 230 ALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGIP 289
Query: 551 RIILALEGGYNISSISYAMTLCTKALLGDPLP 582
+ + GGYN+ +++ A TL + G LP
Sbjct: 290 WVAVG-GGGYNLVNVARAWTLAWGVMNGVELP 320
Score = 196 (74.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 76/221 (34%), Positives = 101/221 (45%)
Query: 161 LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
L E + +A G HHA + + GF N+ VA L+ GL RV LD D HHG
Sbjct: 117 LVAEEGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEK-GL-RVAYLDIDAHHG 174
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGS-FFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 278
+G Q FY+ RVL IS+H + G FFP + G G G G G++VN+ D
Sbjct: 175 DGVQEAFYDTDRVLTISIH--ESGMYFFPGTGFEG--ETGTGAGTGYSVNIPLVAHA-DD 229
Query: 279 PEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRV-LYISVHRYDHG 337
++ AF +V P+ A N VL+ G T F DP L ++ H Y +
Sbjct: 230 ALFMKAFDEVAFPLLAAYNPD---VLVTQL----GADT---FRTDPLTRLEVTTHSYTY- 278
Query: 338 SFFPHSKDAGPHNVGEGKGEGFN-VNVA--WNKVVDSVLNG 375
K G V G G G+N VNVA W + V+NG
Sbjct: 279 -ILRKLKALGIPWVAVGGG-GYNLVNVARAWT-LAWGVMNG 316
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 267 (99.0 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 66/202 (32%), Positives = 105/202 (51%)
Query: 381 VAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFY 439
VAI P G HHA++DE GFC N+ +V L R+L +D D+HHG+G + F
Sbjct: 133 VAINWPGGWHHAKKDEASGFCYLND-AVLGILRL-RQKFDRILYIDLDLHHGDGVEDAFS 190
Query: 440 NDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQ 499
+V+ +S+H++ G FFP + D ++G GKG ++VNV + G+ D +Y +
Sbjct: 191 FTSKVMTVSLHKFSPG-FFPGTGDVT--DIGLGKGRYYSVNVPI-QDGIQDEKYYQICET 246
Query: 500 VILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGG 559
V+ + FNPE V++ G D DP+ ++PE ++ +IL GG
Sbjct: 247 VLKEVYAAFNPEAVVLQLGADTIAGDPMCSFNMTPEGVGKCLKYVLQWQLATLILG-GGG 305
Query: 560 YNISSISYAMTLCTKALLGDPL 581
YN+++ + T T +LG L
Sbjct: 306 YNLANTARCWTYLTGVILGRTL 327
Score = 190 (71.9 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 47/130 (36%), Positives = 73/130 (56%)
Query: 169 VAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFY 227
VAI P G HHA++DE GFC N+ +V L R+L +D D+HHG+G + F
Sbjct: 133 VAINWPGGWHHAKKDEASGFCYLND-AVLGILRL-RQKFDRILYIDLDLHHGDGVEDAFS 190
Query: 228 NDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQ 287
+V+ +S+H++ G FFP + D ++G GKG ++VNV + G+ D +Y +
Sbjct: 191 FTSKVMTVSLHKFSPG-FFPGTGDVT--DIGLGKGRYYSVNVPI-QDGIQDEKYYQICET 246
Query: 288 VILPMYALDN 297
V+ +YA N
Sbjct: 247 VLKEVYAAFN 256
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R+L +D D+HHG+G + F +V+ +S+H++ G FFP + D ++G GKG ++V
Sbjct: 171 RILYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVT--DIGLGKGRYYSV 227
Query: 362 NV 363
NV
Sbjct: 228 NV 229
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 274 (101.5 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 84/289 (29%), Positives = 137/289 (47%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + F++D V ++ R D+ S ++K NVGE
Sbjct: 42 NYGLYRKMEI-YRPHKATADEMTKFHSDEYVRFLRSIRPDNMS--EYNKQMQRFNVGEDC 98
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ A V +V + A + I G HHA++ E GFC N++ +
Sbjct: 99 PVFDGLYEFCQLS-AGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLG 157
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D DVHHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 158 ILELLKYH--QRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 211
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN+ + GM D Y + F +I + F P V++ G D+ D LG
Sbjct: 212 IGAGKGKYYAVNIPL-RDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDRLG 270
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALL 577
++ + + ++K +++ GGY I ++S T T L
Sbjct: 271 CFNLTVKGHGKCVEFVKKYNLPFLMVG-GGGYTIRNVSRCWTYETSVAL 318
Score = 204 (76.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 49/143 (34%), Positives = 74/143 (51%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + A + I G HHA++ E GFC N++ + L H
Sbjct: 108 CQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYH-- 165
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D DVHHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 166 QRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 221
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VN+ + GM D Y + F +I
Sbjct: 222 VNIPL-RDGMDDDAYESIFVPII 243
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 270 (100.1 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 67/216 (31%), Positives = 115/216 (53%)
Query: 372 VLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHH 430
++N +S +AI G HHA+++ P GFC N++ ++ L H R+L +D D+HH
Sbjct: 142 LINNQS--DIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYH--PRILYIDIDLHH 197
Query: 431 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 490
G+G Q FY RV +S H+Y+ G FFP + D +G KG+ F +NV + G+ D
Sbjct: 198 GDGVQEAFYTTDRVFTLSFHKYN-GEFFPGTGDLT--EIGCDKGKHFALNVPL-EDGIDD 253
Query: 491 PEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQG 550
YI F+ ++ P+ F P L++ G D+ +D LG ++ +A+ ++K+
Sbjct: 254 DSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLP 313
Query: 551 RIILALEGGY---NISSI-SYAMTLCTKALLGDPLP 582
+++ GGY N+S + +Y + LL + +P
Sbjct: 314 MLVVG-GGGYTPRNVSRLWTYETGILNDVLLPEDIP 348
Score = 206 (77.6 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 48/134 (35%), Positives = 76/134 (56%)
Query: 160 VLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHH 218
++N +S +AI G HHA+++ P GFC N++ ++ L H R+L +D D+HH
Sbjct: 142 LINNQS--DIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYH--PRILYIDIDLHH 197
Query: 219 GNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 278
G+G Q FY RV +S H+Y+ G FFP + D +G KG+ F +NV + G+ D
Sbjct: 198 GDGVQEAFYTTDRVFTLSFHKYN-GEFFPGTGDLT--EIGCDKGKHFALNVPL-EDGIDD 253
Query: 279 PEYIAAFQQVILPM 292
YI F+ ++ P+
Sbjct: 254 DSYINLFKSIVDPL 267
Score = 132 (51.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R+L +D D+HHG+G Q FY RV +S H+Y+ G FFP + D +G KG+ F +
Sbjct: 187 RILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYN-GEFFPGTGDLT--EIGCDKGKHFAL 243
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 244 NVPLEDGID 252
>UNIPROTKB|E7EPS2 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00465375
ProteinModelPortal:E7EPS2 SMR:E7EPS2 Ensembl:ENST00000426196
ArrayExpress:E7EPS2 Bgee:E7EPS2 Uniprot:E7EPS2
Length = 269
Score = 251 (93.4 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 45/77 (58%), Positives = 58/77 (75%)
Query: 367 KVVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDW 426
++VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DW
Sbjct: 193 RLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDW 252
Query: 427 DVHHGNGTQAMFYNDPR 443
DVHHG GTQ F DPR
Sbjct: 253 DVHHGQGTQFTFDQDPR 269
Score = 249 (92.7 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 45/76 (59%), Positives = 57/76 (75%)
Query: 156 VVDSVLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+VD+VL E +G+AIIRPPGHHA+ G+C+FN+V+VAA+YA H + RVLI+DWD
Sbjct: 194 LVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWD 253
Query: 216 VHHGNGTQAMFYNDPR 231
VHHG GTQ F DPR
Sbjct: 254 VHHGQGTQFTFDQDPR 269
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 23/42 (54%), Positives = 26/42 (61%)
Query: 285 FQQV-ILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 325
F V + YA H + RVLI+DWDVHHG GTQ F DPR
Sbjct: 228 FNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPR 269
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 268 (99.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 81/294 (27%), Positives = 137/294 (46%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 15 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 71
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 72 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 130
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 131 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 184
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ +I + + P V++ G D+ D LG
Sbjct: 185 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLG 243
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A +K ++L GGY I +++ T T L +P
Sbjct: 244 CFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 296
Score = 199 (75.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 42/113 (37%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 111 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 168
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y F+ +I
Sbjct: 169 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPII 216
Score = 43 (20.2 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NVA +KKG
Sbjct: 395 EDEGEGGRRNVADHKKG 411
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 268 (99.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 81/294 (27%), Positives = 137/294 (46%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 15 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 71
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 72 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 130
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 131 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 184
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ +I + + P V++ G D+ D LG
Sbjct: 185 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLG 243
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A +K ++L GGY I +++ T T L +P
Sbjct: 244 CFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 296
Score = 199 (75.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 42/113 (37%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 111 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 168
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y F+ +I
Sbjct: 169 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPII 216
Score = 43 (20.2 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NVA +KKG
Sbjct: 395 EDEGEGGRRNVADHKKG 411
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 268 (99.4 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 82/298 (27%), Positives = 141/298 (47%)
Query: 297 NHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE--- 353
N+GL R L + +++D + ++ + D+ S F + +VGE
Sbjct: 43 NYGLYRKLNVMRPARASFSEITRYHSDDYINFLRNVKSDNMSTF--TDQMARFSVGEDCP 100
Query: 354 ---GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAA 409
G E ++ + + LN + + +AI G HHA++ E GFC N++ +A
Sbjct: 101 VFDGMYEFCQLSCGGSLAAAARLNRQESE-IAINWMGGLHHAKKSEASGFCYSNDIVLAI 159
Query: 410 KYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
L +H RVL +D DVHHG+G + FY RV+ +S H+ HG +FP + D +V
Sbjct: 160 LELLKHH--KRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHK--HGEYFPGTGDL--KDV 213
Query: 470 GEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGG 529
G G G+ + +NV + G+ D Y F+ ++ + +F PE V++ G D+ D LG
Sbjct: 214 GAGSGKYYALNVPL-RDGVDDVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGDRLGV 272
Query: 530 CKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS----YAMTLCTKALLGDPLPL 583
++ + ++K+ ++L GGY I ++S Y + + D LPL
Sbjct: 273 FNLTTYGHGKCVEYMKSF-NVPLLLVGGGGYTIRNVSRCWLYETAIALNQEVSDDLPL 329
Score = 195 (73.7 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 42/113 (37%), Positives = 65/113 (57%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L +H RVL +D DVHHG+G + FY RV+ +S
Sbjct: 139 HHAKKSEASGFCYSNDIVLAILELLKHH--KRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 196
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+ HG +FP + D +VG G G+ + +NV + G+ D Y F+ ++
Sbjct: 197 FHK--HGEYFPGTGDL--KDVGAGSGKYYALNVPL-RDGVDDVTYERIFRTIM 244
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 266 (98.7 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 66/203 (32%), Positives = 108/203 (53%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 150 HHAKKSEASGFCYLNDIVLGIIELLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCS 207
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G FFP + + ++G G G+ + VNV + G+ D Y + F+ VI I +
Sbjct: 208 FHKY--GEFFPGTGEL--RDIGVGAGKNYAVNVPL-RDGIDDATYRSVFEPVIKKIMEWY 262
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P V++ G D+ D LG +S E +A+ +++K+ +++ GGY + ++ A
Sbjct: 263 QPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVG-GGGYTMRNV--A 319
Query: 569 MTLCTKALLGDPLPLLESDLDIN 591
T C + L + + +L+ DL N
Sbjct: 320 RTWCFETGLLNNV-VLDKDLPYN 341
Score = 194 (73.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 43/113 (38%), Positives = 63/113 (55%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 150 HHAKKSEASGFCYLNDIVLGIIELLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCS 207
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G FFP + + ++G G G+ + VNV + G+ D Y + F+ VI
Sbjct: 208 FHKY--GEFFPGTGEL--RDIGVGAGKNYAVNVPL-RDGIDDATYRSVFEPVI 255
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D DVHHG+G + FY RV+ S H+Y G FFP + + ++G G G+ + V
Sbjct: 179 RVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKY--GEFFPGTGEL--RDIGVGAGKNYAV 234
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 235 NVPLRDGID 243
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 268 (99.4 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 81/294 (27%), Positives = 137/294 (46%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 45 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 101
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 102 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 160
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 161 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 214
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ +I + + P V++ G D+ D LG
Sbjct: 215 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLG 273
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A +K ++L GGY I +++ T T L +P
Sbjct: 274 CFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 199 (75.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 42/113 (37%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y F+ +I
Sbjct: 199 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPII 246
Score = 43 (20.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NVA +KKG
Sbjct: 425 EDEGEGGRRNVADHKKG 441
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 268 (99.4 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 81/294 (27%), Positives = 137/294 (46%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 45 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 101
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 102 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 160
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 161 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 214
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ +I + + P V++ G D+ D LG
Sbjct: 215 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLG 273
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A +K ++L GGY I +++ T T L +P
Sbjct: 274 CFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 199 (75.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 42/113 (37%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y F+ +I
Sbjct: 199 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPII 246
Score = 43 (20.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NVA +KKG
Sbjct: 425 EDEGEGGRRNVADHKKG 441
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 268 (99.4 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 81/294 (27%), Positives = 137/294 (46%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 45 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 101
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 102 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 160
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 161 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 214
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ +I + + P V++ G D+ D LG
Sbjct: 215 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLG 273
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A +K ++L GGY I +++ T T L +P
Sbjct: 274 CFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 199 (75.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 42/113 (37%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y F+ +I
Sbjct: 199 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPII 246
Score = 43 (20.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NVA +KKG
Sbjct: 425 EDEGEGGRRNVADHKKG 441
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 268 (99.4 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 81/294 (27%), Positives = 137/294 (46%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 107 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 163
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 164 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 222
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 223 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 276
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ +I + + P V++ G D+ D LG
Sbjct: 277 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLG 335
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A +K ++L GGY I +++ T T L +P
Sbjct: 336 CFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 388
Score = 199 (75.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 42/113 (37%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 203 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 260
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y F+ +I
Sbjct: 261 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPII 308
Score = 43 (20.2 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NVA +KKG
Sbjct: 487 EDEGEGGRRNVADHKKG 503
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 266 (98.7 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 81/294 (27%), Positives = 136/294 (46%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 45 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 101
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 102 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 160
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 161 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 214
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ +I + + P V++ G D+ D LG
Sbjct: 215 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLG 273
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A K ++L GGY I +++ T T L +P
Sbjct: 274 CFNLTVKGHAKCVEVAKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 199 (75.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 42/113 (37%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y F+ +I
Sbjct: 199 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPII 246
Score = 43 (20.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NVA +KKG
Sbjct: 425 EDEGEGGRRNVADHKKG 441
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 268 (99.4 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 81/294 (27%), Positives = 137/294 (46%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 139 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 195
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 196 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 254
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 255 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 308
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ +I + + P V++ G D+ D LG
Sbjct: 309 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLG 367
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A +K ++L GGY I +++ T T L +P
Sbjct: 368 CFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 420
Score = 199 (75.1 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 42/113 (37%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 235 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 292
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y F+ +I
Sbjct: 293 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPII 340
Score = 43 (20.2 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NVA +KKG
Sbjct: 519 EDEGEGGRRNVADHKKG 535
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 260 (96.6 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 67/222 (30%), Positives = 112/222 (50%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ + F
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVLKEVYIAF 255
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALE-GGYNISSISY 567
NP+ V++ G D DP+ ++P ++ +IL E GGYN+++ +
Sbjct: 256 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTAR 315
Query: 568 AMTLCTKALLGDPLPLLESDLDINSSAVTSIKETISSH-KAY 608
T T +LG L D ++ S ++ + I + KAY
Sbjct: 316 CWTYLTGVILGKTLSSEIPDHEVKS-CLSPVSVLIIPYLKAY 356
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 42/121 (34%), Positives = 67/121 (55%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ +Y
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVLKEVYIAF 255
Query: 297 N 297
N
Sbjct: 256 N 256
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 266 NVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 325
N + W+ + +L + L R+L +D D+HHG+G + F +
Sbjct: 136 NWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSK 194
Query: 326 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
V+ +S+H++ G FFP + D +VG GKG ++VNV
Sbjct: 195 VMTVSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNV 229
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 263 (97.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 59/193 (30%), Positives = 101/193 (52%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ ++ L +H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 135 HHAKKSEASGFCYTNDIVLSILELLKHH--ERVLYIDIDIHHGDGVEEAFYTTDRVMTVS 192
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G +FP + D ++G KG+ +++N K G+ D Y + F+ +I + +
Sbjct: 193 FHKY--GDYFPGTGDV--KDIGADKGKYYSLNFPL-KDGIDDESYQSIFRPIIRSVMDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P V++ G D+ D LG ++ +A +LK+ ++L GGY I +++
Sbjct: 248 RPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNVPLVVLG-GGGYTIKNVARC 306
Query: 569 MTLCTKALLGDPL 581
T T L+ L
Sbjct: 307 WTYETSILVDSEL 319
Score = 196 (74.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 40/113 (35%), Positives = 66/113 (58%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ ++ L +H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 135 HHAKKSEASGFCYTNDIVLSILELLKHH--ERVLYIDIDIHHGDGVEEAFYTTDRVMTVS 192
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G KG+ +++N K G+ D Y + F+ +I
Sbjct: 193 FHKY--GDYFPGTGDV--KDIGADKGKYYSLNFPL-KDGIDDESYQSIFRPII 240
Score = 134 (52.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 288 VILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAG 347
++L + L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D
Sbjct: 151 IVLSILELLKHH-ERVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GDYFPGTGDV- 206
Query: 348 PHNVGEGKGEGFNVNVAWNKVVD 370
++G KG+ +++N +D
Sbjct: 207 -KDIGADKGKYYSLNFPLKDGID 228
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 262 (97.3 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 73/259 (28%), Positives = 126/259 (48%)
Query: 325 RVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVDSVLNGESAHGVAII 384
RV ++H ++ + D P V +G GE ++ + + LN A +AI
Sbjct: 86 RVTPDNLHLFEREQVIFNVGDDCP--VFDGLGEFCKISCGGSMEGAARLNRGQAD-IAIN 142
Query: 385 RPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 443
G HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY + R
Sbjct: 143 YAGGLHHAKKSEASGFCYTNDIVLGIIELLRYH--PRVLYIDTDVHHGDGVEEAFYTNDR 200
Query: 444 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILP 503
V+ S H++ G FFP + + +G+GK N+ + + G+ D Y + F+ +I
Sbjct: 201 VMTCSFHKF--GEFFPGTGNLTDIGIGKGKYHAINIPL---RDGIDDASYKSIFEPIITK 255
Query: 504 IAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNIS 563
I + P +++ G D+ D LG +S +A+ +++++L ++L GGY I
Sbjct: 256 IMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPVMVLG-GGGYTIR 314
Query: 564 SISYAMTLCTKALLGDPLP 582
+++ T G+ LP
Sbjct: 315 NVARTWAFETGVCNGEILP 333
Score = 184 (69.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 39/113 (34%), Positives = 62/113 (54%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY + RV+ S
Sbjct: 148 HHAKKSEASGFCYTNDIVLGIIELLRYH--PRVLYIDTDVHHGDGVEEAFYTNDRVMTCS 205
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H++ G FFP + + +G+GK N+ + + G+ D Y + F+ +I
Sbjct: 206 FHKF--GEFFPGTGNLTDIGIGKGKYHAINIPL---RDGIDDASYKSIFEPII 253
Score = 126 (49.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D DVHHG+G + FY + RV+ S H++ G FFP + + +G+GK N+
Sbjct: 177 RVLYIDTDVHHGDGVEEAFYTNDRVMTCSFHKF--GEFFPGTGNLTDIGIGKGKYHAINI 234
Score = 39 (18.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 455 GSFFPHS-KDAGPHNVGEGKGEGFNVNVAWNKKG 487
G F+ KD G N+ E N N N G
Sbjct: 428 GEFYDDDEKDKGEKNIQENGNVNANANGNGNGNG 461
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 262 (97.3 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 73/259 (28%), Positives = 126/259 (48%)
Query: 325 RVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVDSVLNGESAHGVAII 384
RV ++H ++ + D P V +G GE ++ + + LN A +AI
Sbjct: 86 RVTPDNLHLFEREQVIFNVGDDCP--VFDGLGEFCKISCGGSMEGAARLNRGQAD-IAIN 142
Query: 385 RPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 443
G HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY + R
Sbjct: 143 YAGGLHHAKKSEASGFCYTNDIVLGIIELLRYH--PRVLYIDTDVHHGDGVEEAFYTNDR 200
Query: 444 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILP 503
V+ S H++ G FFP + + +G+GK N+ + + G+ D Y + F+ +I
Sbjct: 201 VMTCSFHKF--GEFFPGTGNLTDIGIGKGKYHAINIPL---RDGIDDASYKSIFEPIITK 255
Query: 504 IAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNIS 563
I + P +++ G D+ D LG +S +A+ +++++L ++L GGY I
Sbjct: 256 IMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPVMVLG-GGGYTIR 314
Query: 564 SISYAMTLCTKALLGDPLP 582
+++ T G+ LP
Sbjct: 315 NVARTWAFETGVCNGEILP 333
Score = 184 (69.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 39/113 (34%), Positives = 62/113 (54%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY + RV+ S
Sbjct: 148 HHAKKSEASGFCYTNDIVLGIIELLRYH--PRVLYIDTDVHHGDGVEEAFYTNDRVMTCS 205
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H++ G FFP + + +G+GK N+ + + G+ D Y + F+ +I
Sbjct: 206 FHKF--GEFFPGTGNLTDIGIGKGKYHAINIPL---RDGIDDASYKSIFEPII 253
Score = 126 (49.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D DVHHG+G + FY + RV+ S H++ G FFP + + +G+GK N+
Sbjct: 177 RVLYIDTDVHHGDGVEEAFYTNDRVMTCSFHKF--GEFFPGTGNLTDIGIGKGKYHAINI 234
Score = 39 (18.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 455 GSFFPHS-KDAGPHNVGEGKGEGFNVNVAWNKKG 487
G F+ KD G N+ E N N N G
Sbjct: 428 GEFYDDDEKDKGEKNIQENGNVNANANGNGNGNG 461
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 261 (96.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 57/178 (32%), Positives = 96/178 (53%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ EP GFC N++ ++ L H RV+ +D D+HHG+G Q FYN RV+ +S
Sbjct: 167 HHAKKFEPSGFCYVNDIVLSIINLLRVH--PRVMYIDIDLHHGDGVQEAFYNTDRVMTVS 224
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y+ G FFP + VG G G+ + +NV + G+ D YI F+ ++ P+ +F
Sbjct: 225 FHKYN-GEFFPGTGSVD--EVGIGSGKNYAINVPL-RDGIDDESYIRLFKSIMEPLITKF 280
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS 566
P ++ G D+ D LG ++ A+ ++K+ +++ GGY ++S
Sbjct: 281 QPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVG-GGGYTPRNVS 337
Score = 213 (80.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 44/116 (37%), Positives = 68/116 (58%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ EP GFC N++ ++ L H RV+ +D D+HHG+G Q FYN RV+ +S
Sbjct: 167 HHAKKFEPSGFCYVNDIVLSIINLLRVH--PRVMYIDIDLHHGDGVQEAFYNTDRVMTVS 224
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPM 292
H+Y+ G FFP + VG G G+ + +NV + G+ D YI F+ ++ P+
Sbjct: 225 FHKYN-GEFFPGTGSVD--EVGIGSGKNYAINVPL-RDGIDDESYIRLFKSIMEPL 276
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RV+ +D D+HHG+G Q FYN RV+ +S H+Y+ G FFP + VG G G+ + +
Sbjct: 196 RVMYIDIDLHHGDGVQEAFYNTDRVMTVSFHKYN-GEFFPGTGSVD--EVGIGSGKNYAI 252
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 253 NVPLRDGID 261
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 261 (96.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 57/178 (32%), Positives = 96/178 (53%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ EP GFC N++ ++ L H RV+ +D D+HHG+G Q FYN RV+ +S
Sbjct: 167 HHAKKFEPSGFCYVNDIVLSIINLLRVH--PRVMYIDIDLHHGDGVQEAFYNTDRVMTVS 224
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y+ G FFP + VG G G+ + +NV + G+ D YI F+ ++ P+ +F
Sbjct: 225 FHKYN-GEFFPGTGSVD--EVGIGSGKNYAINVPL-RDGIDDESYIRLFKSIMEPLITKF 280
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS 566
P ++ G D+ D LG ++ A+ ++K+ +++ GGY ++S
Sbjct: 281 QPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVG-GGGYTPRNVS 337
Score = 213 (80.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 44/116 (37%), Positives = 68/116 (58%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ EP GFC N++ ++ L H RV+ +D D+HHG+G Q FYN RV+ +S
Sbjct: 167 HHAKKFEPSGFCYVNDIVLSIINLLRVH--PRVMYIDIDLHHGDGVQEAFYNTDRVMTVS 224
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPM 292
H+Y+ G FFP + VG G G+ + +NV + G+ D YI F+ ++ P+
Sbjct: 225 FHKYN-GEFFPGTGSVD--EVGIGSGKNYAINVPL-RDGIDDESYIRLFKSIMEPL 276
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RV+ +D D+HHG+G Q FYN RV+ +S H+Y+ G FFP + VG G G+ + +
Sbjct: 196 RVMYIDIDLHHGDGVQEAFYNTDRVMTVSFHKYN-GEFFPGTGSVD--EVGIGSGKNYAI 252
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 253 NVPLRDGID 261
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 264 (98.0 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 79/290 (27%), Positives = 138/290 (47%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D V ++ R D+ S ++K NVGE
Sbjct: 43 NYGLYRKMEI-YRPHKAVMEEMTKYHSDDYVKFLRTIRPDNMS--EYTKQMQRFNVGEDC 99
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ + V +V + +AI G HHA++ E GFC N++ +A
Sbjct: 100 PVFDGLYEFCQLS-SGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLA 158
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 159 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 212
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ ++ + + P + + G D+ D LG
Sbjct: 213 IGAGKGKYYAVNFPL-RDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGDRLG 271
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLG 578
++ + +A ++K +++ GGY I +++ T T LG
Sbjct: 272 CFNLTLKGHAKCVEFMKQYNLPLLLMG-GGGYTIRNVARCWTYETSTALG 320
Score = 199 (75.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 49/150 (32%), Positives = 77/150 (51%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ V +V + +AI G HHA++ E GFC N++ +A L H
Sbjct: 109 CQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 166
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D ++G GKG+ +
Sbjct: 167 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYA 222
Query: 267 VNVAWNKKGMSDPEYIAAFQQV---ILPMY 293
VN + G+ D Y F+ + ++ MY
Sbjct: 223 VNFPL-RDGIDDESYDKIFKPIMCKVMEMY 251
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 257 (95.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 66/199 (33%), Positives = 104/199 (52%)
Query: 369 VDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
VD+VL+G+ H + + G HH + + GFCI+N+ S+A KY +GL RVL +D D
Sbjct: 112 VDAVLSGKVKHALNL--GGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTD 168
Query: 428 VHHGNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
HHG+G Q FY+DP V IS+H + G + FP + + G+G G ++ NV +
Sbjct: 169 AHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGT--GAVNERGQGNGYSYSFNVPLDAF 224
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
D ++ +++ V+ +A F P+++L G DA DPL + Y +
Sbjct: 225 -TEDESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLARE 283
Query: 547 LA----QGRIILALEGGYN 561
+A +GR I GGY+
Sbjct: 284 IANEYCEGRWIAVGGGGYD 302
Score = 199 (75.1 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 48/135 (35%), Positives = 77/135 (57%)
Query: 157 VDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
VD+VL+G+ H + + G HH + + GFCI+N+ S+A KY +GL RVL +D D
Sbjct: 112 VDAVLSGKVKHALNL--GGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTD 168
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
HHG+G Q FY+DP V IS+H + G + FP + + G+G G ++ NV +
Sbjct: 169 AHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGT--GAVNERGQGNGYSYSFNVPLDAF 224
Query: 275 GMSDPEYIAAFQQVI 289
D ++ +++ V+
Sbjct: 225 -TEDESFLDSYRTVV 238
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNV 351
Y +GL RVL +D D HHG+G Q FY+DP V IS+H + G + FP +
Sbjct: 153 YIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGTGAVNERGQ 209
Query: 352 GEGKGEGFNV 361
G G FNV
Sbjct: 210 GNGYSYSFNV 219
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 257 (95.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 66/199 (33%), Positives = 104/199 (52%)
Query: 369 VDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
VD+VL+G+ H + + G HH + + GFCI+N+ S+A KY +GL RVL +D D
Sbjct: 112 VDAVLSGKVKHALNL--GGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTD 168
Query: 428 VHHGNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKK 486
HHG+G Q FY+DP V IS+H + G + FP + + G+G G ++ NV +
Sbjct: 169 AHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGT--GAVNERGQGNGYSYSFNVPLDAF 224
Query: 487 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
D ++ +++ V+ +A F P+++L G DA DPL + Y +
Sbjct: 225 -TEDESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLARE 283
Query: 547 LA----QGRIILALEGGYN 561
+A +GR I GGY+
Sbjct: 284 IANEYCEGRWIAVGGGGYD 302
Score = 199 (75.1 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 48/135 (35%), Positives = 77/135 (57%)
Query: 157 VDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
VD+VL+G+ H + + G HH + + GFCI+N+ S+A KY +GL RVL +D D
Sbjct: 112 VDAVLSGKVKHALNL--GGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTD 168
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKK 274
HHG+G Q FY+DP V IS+H + G + FP + + G+G G ++ NV +
Sbjct: 169 AHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGT--GAVNERGQGNGYSYSFNVPLDAF 224
Query: 275 GMSDPEYIAAFQQVI 289
D ++ +++ V+
Sbjct: 225 -TEDESFLDSYRTVV 238
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 293 YALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNV 351
Y +GL RVL +D D HHG+G Q FY+DP V IS+H + G + FP +
Sbjct: 153 YIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGTGAVNERGQ 209
Query: 352 GEGKGEGFNV 361
G G FNV
Sbjct: 210 GNGYSYSFNV 219
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 258 (95.9 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 61/198 (30%), Positives = 104/198 (52%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA +DE GFC N++ +A L H +RVL +D DVHHG+G Q FY RV+ +S
Sbjct: 143 HHARKDEASGFCYVNDIVLAILELLKFH--ARVLYIDIDVHHGDGVQEAFYLTDRVMTVS 200
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H++ G FFP + D +G G+ ++VNV G+ D Y+ F+ VI + +
Sbjct: 201 FHKFG-GDFFPGTGDID--EIGAKTGKLYSVNVPL-ADGIDDKNYLNIFKPVIQGVMDYY 256
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P ++++ G D+ D LG ++ + +A ++K+ ++L GGY + +++
Sbjct: 257 RPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKSFNIPTLVLG-GGGYTVRNVARC 315
Query: 567 --YAMTLCTKALLGDPLP 582
Y ++C + + LP
Sbjct: 316 WTYETSVCVDTEVNNELP 333
Score = 202 (76.2 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 50/143 (34%), Positives = 74/143 (51%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C Y + ++ + +AI G HHA +DE GFC N++ +A L H
Sbjct: 113 CSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFH-- 170
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
+RVL +D DVHHG+G Q FY RV+ +S H++ G FFP + D +G G+ ++
Sbjct: 171 ARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFG-GDFFPGTGDID--EIGAKTGKLYS 227
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
VNV G+ D Y+ F+ VI
Sbjct: 228 VNVPL-ADGIDDKNYLNIFKPVI 249
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 301 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 360
+RVL +D DVHHG+G Q FY RV+ +S H++ G FFP + D +G G+ ++
Sbjct: 171 ARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFG-GDFFPGTGDID--EIGAKTGKLYS 227
Query: 361 VNV 363
VNV
Sbjct: 228 VNV 230
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 254 (94.5 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 60/193 (31%), Positives = 99/193 (51%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ + F
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESVLKEVYQAF 255
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
NP+ V++ G D DP+ ++P ++ +IL GGYN+++ +
Sbjct: 256 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNLANTARC 314
Query: 569 MTLCTKALLGDPL 581
T T +LG L
Sbjct: 315 WTYLTGVILGKTL 327
Score = 180 (68.4 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 42/121 (34%), Positives = 67/121 (55%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ +Y
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESVLKEVYQAF 255
Query: 297 N 297
N
Sbjct: 256 N 256
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 266 NVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 325
N + W+ + +L + L R+L +D D+HHG+G + F +
Sbjct: 136 NWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSK 194
Query: 326 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
V+ +S+H++ G FFP + D +VG GKG ++VNV
Sbjct: 195 VMTVSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNV 229
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 252 (93.8 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 60/193 (31%), Positives = 98/193 (50%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H++ G FFP + D +VG GKG ++VNV + G+ D Y + V+ + F
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDERYYHICESVLKEVYIAF 255
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
NP+ V++ G D DP+ ++P ++ +IL GGYN+++ +
Sbjct: 256 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWELATLILG-GGGYNLANTARC 314
Query: 569 MTLCTKALLGDPL 581
T T +LG L
Sbjct: 315 WTYLTGVILGKTL 327
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 42/121 (34%), Positives = 66/121 (54%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+H++ G FFP + D +VG GKG ++VNV + G+ D Y + V+ +Y
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDERYYHICESVLKEVYIAF 255
Query: 297 N 297
N
Sbjct: 256 N 256
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 266 NVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 325
N + W+ + +L + L R+L +D D+HHG+G + F +
Sbjct: 136 NWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSK 194
Query: 326 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
V+ +S+H++ G FFP + D +VG GKG ++VNV
Sbjct: 195 VMTVSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNV 229
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 237 (88.5 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 58/193 (30%), Positives = 96/193 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
H +DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 51 HKQMRDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 108
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ + F
Sbjct: 109 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESVLKEVYQAF 164
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
NP+ V++ G D DP+ ++P ++ +IL GGYN+++ +
Sbjct: 165 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNLANTARC 223
Query: 569 MTLCTKALLGDPL 581
T T +LG L
Sbjct: 224 WTYLTGVILGKTL 236
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
H +DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 51 HKQMRDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 108
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ +Y
Sbjct: 109 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESVLKEVYQAF 164
Query: 297 N 297
N
Sbjct: 165 N 165
Score = 123 (48.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
R+L +D D+HHG+G + F +V+ +S+H++ G FFP + D +VG GKG ++V
Sbjct: 80 RILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSV 136
Query: 362 NV 363
NV
Sbjct: 137 NV 138
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 251 (93.4 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 60/193 (31%), Positives = 99/193 (51%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ + F
Sbjct: 200 LHKFSPG-FFPGTGDMS--DVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVLKEVYQAF 255
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
NP+ V++ G D DP+ ++P ++ +IL GGYN+++ +
Sbjct: 256 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLILG-GGGYNLANTARC 314
Query: 569 MTLCTKALLGDPL 581
T T +LG L
Sbjct: 315 WTYLTGVILGKTL 327
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 42/121 (34%), Positives = 67/121 (55%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ +Y
Sbjct: 200 LHKFSPG-FFPGTGDMS--DVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVLKEVYQAF 255
Query: 297 N 297
N
Sbjct: 256 N 256
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 259 EGKGE-GFNVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQ 317
+GK + N + W+ + +L + L R+L +D D+HHG+G +
Sbjct: 128 DGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFDRILYVDLDLHHGDGVE 186
Query: 318 AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
F +V+ +S+H++ G FFP + D +VG GKG ++VNV
Sbjct: 187 DAFSFTSKVMTVSLHKFSPG-FFPGTGDMS--DVGLGKGRYYSVNV 229
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 251 (93.4 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 60/193 (31%), Positives = 99/193 (51%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ + F
Sbjct: 200 LHKFSPG-FFPGTGDMS--DVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVLKEVYQAF 255
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
NP+ V++ G D DP+ ++P ++ +IL GGYN+++ +
Sbjct: 256 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLILG-GGGYNLANTARC 314
Query: 569 MTLCTKALLGDPL 581
T T +LG L
Sbjct: 315 WTYLTGVILGKTL 327
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 42/121 (34%), Positives = 67/121 (55%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ +Y
Sbjct: 200 LHKFSPG-FFPGTGDMS--DVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVLKEVYQAF 255
Query: 297 N 297
N
Sbjct: 256 N 256
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 259 EGKGE-GFNVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQ 317
+GK + N + W+ + +L + L R+L +D D+HHG+G +
Sbjct: 128 DGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFDRILYVDLDLHHGDGVE 186
Query: 318 AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
F +V+ +S+H++ G FFP + D +VG GKG ++VNV
Sbjct: 187 DAFSFTSKVMTVSLHKFSPG-FFPGTGDMS--DVGLGKGRYYSVNV 229
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 253 (94.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 60/193 (31%), Positives = 99/193 (51%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 180 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 237
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ + F
Sbjct: 238 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVLKEVYIAF 293
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
NP+ V++ G D DP+ ++P ++ +IL GGYN+++ +
Sbjct: 294 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNLANTARC 352
Query: 569 MTLCTKALLGDPL 581
T T +LG L
Sbjct: 353 WTYLTGVILGKTL 365
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 42/121 (34%), Positives = 67/121 (55%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 180 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 237
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ +Y
Sbjct: 238 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVLKEVYIAF 293
Query: 297 N 297
N
Sbjct: 294 N 294
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 266 NVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 325
N + W+ + +L + L R+L +D D+HHG+G + F +
Sbjct: 174 NWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSK 232
Query: 326 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
V+ +S+H++ G FFP + D +VG GKG ++VNV
Sbjct: 233 VMTVSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNV 267
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 257 (95.5 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 64/201 (31%), Positives = 103/201 (51%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 149 HHAKKSEASGFCYLNDIVLGIIELLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCS 206
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G FFP + + ++G GKG+ +VNV + G+ D Y + F+ VI I +
Sbjct: 207 FHKY--GEFFPGTGEL--RDIGVGKGKYHSVNVPL-RDGIDDATYKSVFEPVISKIIEWY 261
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S +A+ +++K+ +++ GGY + +++
Sbjct: 262 QPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVG-GGGYTMRNVART 320
Query: 567 --YAMTLCTKALLGDPLPLLE 585
Y L L D LP E
Sbjct: 321 WAYESGLLNNVKLPDELPYNE 341
Score = 196 (74.1 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 44/113 (38%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 149 HHAKKSEASGFCYLNDIVLGIIELLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCS 206
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G FFP + + ++G GKG+ +VNV + G+ D Y + F+ VI
Sbjct: 207 FHKY--GEFFPGTGEL--RDIGVGKGKYHSVNVPL-RDGIDDATYKSVFEPVI 254
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D DVHHG+G + FY RV+ S H+Y G FFP + + ++G GKG+ +V
Sbjct: 178 RVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKY--GEFFPGTGEL--RDIGVGKGKYHSV 233
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 234 NVPLRDGID 242
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 257 (95.5 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 64/201 (31%), Positives = 103/201 (51%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 149 HHAKKSEASGFCYLNDIVLGIIELLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCS 206
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y G FFP + + ++G GKG+ +VNV + G+ D Y + F+ VI I +
Sbjct: 207 FHKY--GEFFPGTGEL--RDIGVGKGKYHSVNVPL-RDGIDDATYKSVFEPVISKIIEWY 261
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S +A+ +++K+ +++ GGY + +++
Sbjct: 262 QPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVG-GGGYTMRNVART 320
Query: 567 --YAMTLCTKALLGDPLPLLE 585
Y L L D LP E
Sbjct: 321 WAYESGLLNNVKLPDELPYNE 341
Score = 196 (74.1 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 44/113 (38%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ S
Sbjct: 149 HHAKKSEASGFCYLNDIVLGIIELLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCS 206
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G FFP + + ++G GKG+ +VNV + G+ D Y + F+ VI
Sbjct: 207 FHKY--GEFFPGTGEL--RDIGVGKGKYHSVNVPL-RDGIDDATYKSVFEPVI 254
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D DVHHG+G + FY RV+ S H+Y G FFP + + ++G GKG+ +V
Sbjct: 178 RVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKY--GEFFPGTGEL--RDIGVGKGKYHSV 233
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 234 NVPLRDGID 242
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 257 (95.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 75/269 (27%), Positives = 131/269 (48%)
Query: 320 FYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE------GKGEGFNVNVAWNKVVDSVL 373
F+ D + ++S D+ F +K+ +NVG+ G E ++ + + L
Sbjct: 84 FHTDEYIDFLSKVTPDNMDAF--AKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARL 141
Query: 374 NGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGN 432
N +A+ G HHA++ E GFC N++ + L RVL +D DVHHG+
Sbjct: 142 NRNKCD-IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELL--RFKQRVLYVDIDVHHGD 198
Query: 433 GTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPE 492
G + FY RV+ +S H+Y G +FP + + ++G G+G+ + VN + G+ D
Sbjct: 199 GVEEAFYTTDRVMTVSFHKY--GEYFPGTGEL--RDIGVGQGKYYAVNFPL-RDGIDDVS 253
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
Y + F+ VI + + PE V++ G D+ D LG +S +A+ ++K+ +
Sbjct: 254 YKSIFEPVIKSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTL 313
Query: 553 ILALEGGYNISSISYAMTLCTKALLGDPL 581
I+ GGY + +++ T L+GD L
Sbjct: 314 IVG-GGGYTMRNVARTWAFETGILVGDNL 341
Score = 179 (68.1 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 40/113 (35%), Positives = 63/113 (55%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L RVL +D DVHHG+G + FY RV+ +S
Sbjct: 157 HHAKKSEASGFCYVNDIVLGILELL--RFKQRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 214
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + + ++G G+G+ + VN + G+ D Y + F+ VI
Sbjct: 215 FHKY--GEYFPGTGEL--RDIGVGQGKYYAVNFPL-RDGIDDVSYKSIFEPVI 262
Score = 131 (51.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D DVHHG+G + FY RV+ +S H+Y G +FP + + ++G G+G+ + V
Sbjct: 186 RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGEL--RDIGVGQGKYYAV 241
Query: 362 NVAWNKVVDSV 372
N +D V
Sbjct: 242 NFPLRDGIDDV 252
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 251 (93.4 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 62/200 (31%), Positives = 101/200 (50%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D DVHHG+G Q FY RV+ S
Sbjct: 139 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDVHHGDGVQEAFYLTDRVMTAS 196
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + +G G ++VNV K+G+ D Y F+ +I I +
Sbjct: 197 FHKYGN-YFFPGTGDM--YEIGAESGRYYSVNVPL-KEGIDDQSYFQVFKPIISAIMDFY 252
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P +++ G D+ D LG +S + + ++K L +++ GGY + +++
Sbjct: 253 RPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVG-GGGYTLRNVARC 311
Query: 569 MTLCTKALLGDPLPLLESDL 588
T T L+ + E+DL
Sbjct: 312 WTHETSLLVDQDI---ENDL 328
Score = 191 (72.3 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 43/113 (38%), Positives = 62/113 (54%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G Q FY RV+ S
Sbjct: 139 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDVHHGDGVQEAFYLTDRVMTAS 196
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + +G G ++VNV K+G+ D Y F+ +I
Sbjct: 197 FHKYGN-YFFPGTGDM--YEIGAESGRYYSVNVPL-KEGIDDQSYFQVFKPII 245
Score = 127 (49.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D DVHHG+G Q FY RV+ S H+Y + FFP + D + +G G ++V
Sbjct: 168 RVLYIDIDVHHGDGVQEAFYLTDRVMTASFHKYGN-YFFPGTGDM--YEIGAESGRYYSV 224
Query: 362 NVAWNKVVD 370
NV + +D
Sbjct: 225 NVPLKEGID 233
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 250 (93.1 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 58/194 (29%), Positives = 98/194 (50%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ +A L RVL +D D+HHG+G Q FY RVL +S
Sbjct: 157 HHAKRGEASGFCYVNDIVLAILNML--RFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVS 214
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y+ G FFP + + + V GK NV + + G+ D +Y + F+ +I P F
Sbjct: 215 FHKYN-GDFFPATGNFDENGVKGGKYFALNVPL---EDGIGDEQYTSLFKSIIEPTINTF 270
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P +++ G D+ D LG +S A+ + ++ +++ GGY + +++ A
Sbjct: 271 QPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVG-GGGYTLRNVARA 329
Query: 569 MTLCTKALLGDPLP 582
T + + +P
Sbjct: 330 WCYETSICVNEQIP 343
Score = 199 (75.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 59/189 (31%), Positives = 89/189 (47%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L RVL +D D+HHG+G Q FY RVL +S
Sbjct: 157 HHAKRGEASGFCYVNDIVLAILNML--RFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVS 214
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
H+Y+ G FFP + + + V GK NV + + G+ D +Y + F+ +I P
Sbjct: 215 FHKYN-GDFFPATGNFDENGVKGGKYFALNVPL---EDGIGDEQYTSLFKSIIEPTI--- 267
Query: 297 NHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKG 356
N ++L G ++ Y+ V +S+H + F S + VG G
Sbjct: 268 NTFQPSAIVLQC------GADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGY 321
Query: 357 EGFNVNVAW 365
NV AW
Sbjct: 322 TLRNVARAW 330
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 249 (92.7 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 78/293 (26%), Positives = 138/293 (47%)
Query: 297 NHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE--- 353
N+GL R L + F++D + ++ D+ F +K NVGE
Sbjct: 48 NYGLYRNLEIFRPFPASFEDMTRFHSDEYMTFLKSANPDNLKSF--NKQMLKFNVGEDCP 105
Query: 354 ---GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAA 409
G E ++ + + LN + +AI G HHA++ E GFC N++ +
Sbjct: 106 LFDGLYEFCQLSSGGSLAAATKLNKQKVD-IAINWMGGLHHAKKSEASGFCYTNDIVLGI 164
Query: 410 KYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
L H RVL +D DVHHG+G + FY RV+ +S H+Y G FFP + D ++
Sbjct: 165 LELLKYH--KRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKY--GDFFPGTGDL--KDI 218
Query: 470 GEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGG 529
G GKG+ ++VNV + G++D Y + F+ ++ + +F+P V++ G D+ D LG
Sbjct: 219 GAGKGKLYSVNVPL-RDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGP 277
Query: 530 CKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + + + ++ +++ GGY +++ T T + +P
Sbjct: 278 FNLTLKGHGECARFFRSY-NVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVP 329
Score = 202 (76.2 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ +S
Sbjct: 144 HHAKKSEASGFCYTNDIVLGILELLKYH--KRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 201
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G FFP + D ++G GKG+ ++VNV + G++D Y + F+ ++
Sbjct: 202 FHKY--GDFFPGTGDL--KDIGAGKGKLYSVNVPL-RDGITDVSYQSIFKPIM 249
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 249 (92.7 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 78/293 (26%), Positives = 138/293 (47%)
Query: 297 NHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE--- 353
N+GL R L + F++D + ++ D+ F +K NVGE
Sbjct: 48 NYGLYRNLEIFRPFPASFEDMTRFHSDEYMTFLKSANPDNLKSF--NKQMLKFNVGEDCP 105
Query: 354 ---GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAA 409
G E ++ + + LN + +AI G HHA++ E GFC N++ +
Sbjct: 106 LFDGLYEFCQLSSGGSLAAATKLNKQKVD-IAINWMGGLHHAKKSEASGFCYTNDIVLGI 164
Query: 410 KYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
L H RVL +D DVHHG+G + FY RV+ +S H+Y G FFP + D ++
Sbjct: 165 LELLKYH--KRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKY--GDFFPGTGDL--KDI 218
Query: 470 GEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGG 529
G GKG+ ++VNV + G++D Y + F+ ++ + +F+P V++ G D+ D LG
Sbjct: 219 GAGKGKLYSVNVPL-RDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGP 277
Query: 530 CKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + + + ++ +++ GGY +++ T T + +P
Sbjct: 278 FNLTLKGHGECARFFRSY-NVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVP 329
Score = 202 (76.2 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D DVHHG+G + FY RV+ +S
Sbjct: 144 HHAKKSEASGFCYTNDIVLGILELLKYH--KRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 201
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G FFP + D ++G GKG+ ++VNV + G++D Y + F+ ++
Sbjct: 202 FHKY--GDFFPGTGDL--KDIGAGKGKLYSVNVPL-RDGITDVSYQSIFKPIM 249
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 243 (90.6 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 59/193 (30%), Positives = 97/193 (50%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H++ G FFP + D +VG GKG ++VNV + + D Y + V+ + F
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDCIQDERYYHICESVLKEVYIAF 255
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
NP+ V++ G D DP+ ++P ++ +IL GGYN+++ +
Sbjct: 256 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWELATLILG-GGGYNLANTARC 314
Query: 569 MTLCTKALLGDPL 581
T T +LG L
Sbjct: 315 WTYLTGVILGKTL 327
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 41/121 (33%), Positives = 65/121 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+H++ G FFP + D +VG GKG ++VNV + + D Y + V+ +Y
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDCIQDERYYHICESVLKEVYIAF 255
Query: 297 N 297
N
Sbjct: 256 N 256
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 266 NVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 325
N + W+ + +L + L R+L +D D+HHG+G + F +
Sbjct: 136 NWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSK 194
Query: 326 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
V+ +S+H++ G FFP + D +VG GKG ++VNV
Sbjct: 195 VMTVSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNV 229
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 253 (94.1 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 78/269 (28%), Positives = 127/269 (47%)
Query: 318 AMFYNDPRVLYISVHRYDHGSFFPHSKDAG---PHNVGEGKGE-GFNVNVAWNKVVDSVL 373
A+F+ D + ++ D + P S D G V EG + V A ++L
Sbjct: 1067 AVFHTDSYLQHLHKISQDGDNDDPQSADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLL 1126
Query: 374 NGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGN 432
+G+ VAI G HHA++DE GFC N+ + + + RVL +D D+HHG+
Sbjct: 1127 DGKC--DVAINWAGGWHHAKKDEASGFCYVNDAVLGILKLREKY--DRVLYVDVDLHHGD 1182
Query: 433 GTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPE 492
G + F +V+ +S+H++ G FFP + D + G GKG + VNV + + G+ D
Sbjct: 1183 GVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVT--DTGLGKGRWYAVNVPF-EDGVRDDR 1238
Query: 493 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 552
Y F V+ + FNPE V++ G D DP+ ++ A ++ +
Sbjct: 1239 YCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDPMCSFNMTSVGVAKCLTYILGWELPTL 1298
Query: 553 ILALEGGYNISSISYAMTLCTKALLGDPL 581
+L GGYN+++ + T T +LG L
Sbjct: 1299 LLG-GGGYNLANTARCWTYLTGTVLGQTL 1326
Score = 181 (68.8 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 48/140 (34%), Positives = 76/140 (54%)
Query: 159 SVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVH 217
++L+G+ VAI G HHA++DE GFC N+ + + + RVL +D D+H
Sbjct: 1124 NLLDGKC--DVAINWAGGWHHAKKDEASGFCYVNDAVLGILKLREKY--DRVLYVDVDLH 1179
Query: 218 HGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 277
HG+G + F +V+ +S+H++ G FFP + D + G GKG + VNV + + G+
Sbjct: 1180 HGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVT--DTGLGKGRWYAVNVPF-EDGVR 1235
Query: 278 DPEYIAAFQQVILPMYALDN 297
D Y F V+ + AL N
Sbjct: 1236 DDRYCQTFTSVMQEVKALFN 1255
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 242 (90.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 70/241 (29%), Positives = 121/241 (50%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ + GFC N++ + L +H RVL +D DVHHG+G + FY RV+ +S
Sbjct: 136 HHAKKCDASGFCYINDLVLGILELLKHH--PRVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H++ FFP + D +GE +G+ + +NV K G+ D + F+ +I + +
Sbjct: 194 FHKFGD-KFFPGTGDV--KEIGEREGKFYAINVPL-KDGIDDSSFNRLFRTIISKVVEIY 249
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P +++ G D+ D LG +S + +A ++K ++ GGY +++
Sbjct: 250 QPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTG-GGGYTKENVARC 308
Query: 569 MTLCTKALLGDPLP--LLESDLDINSSAVTSIK------ETISSHKAYWSSLKFLVALPE 620
T+ T LL LP + E+D + S+K E +++ K+Y SS+K V + E
Sbjct: 309 WTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNT-KSYISSIK--VQILE 365
Query: 621 N 621
N
Sbjct: 366 N 366
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 47/145 (32%), Positives = 76/145 (52%)
Query: 148 CEPYVDNHVVDSV--LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNH 204
C+ Y +D+ LN + +AI G HHA++ + GFC N++ + L +H
Sbjct: 106 CQLYAGG-TIDAARRLNNKLCD-IAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHH 163
Query: 205 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 264
RVL +D DVHHG+G + FY RV+ +S H++ FFP + D +GE +G+
Sbjct: 164 --PRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-KFFPGTGDV--KEIGEREGKF 218
Query: 265 FNVNVAWNKKGMSDPEYIAAFQQVI 289
+ +NV K G+ D + F+ +I
Sbjct: 219 YAINVPL-KDGIDDSSFNRLFRTII 242
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 288 VILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAG 347
++L + L H RVL +D DVHHG+G + FY RV+ +S H++ FFP + D
Sbjct: 152 LVLGILELLKHH-PRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-KFFPGTGDV- 208
Query: 348 PHNVGEGKGEGFNVNVAWNKVVD 370
+GE +G+ + +NV +D
Sbjct: 209 -KEIGEREGKFYAINVPLKDGID 230
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 242 (90.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 58/193 (30%), Positives = 96/193 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYALNVPL-RDGIDDQSYKHLFQPVINQVVDYY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P +++ G D+ D LG +S + ++K+ ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRNVARC 306
Query: 569 MTLCTKALLGDPL 581
T T L+ + +
Sbjct: 307 WTYETSLLVDEAI 319
Score = 184 (69.8 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYALNVPL-RDGIDDQSYKHLFQPVI 240
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYAL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 243 (90.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 65/207 (31%), Positives = 105/207 (50%)
Query: 373 LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
LN + A +AI G HHA++ E GFC N++ + L RVL +D DVHHG
Sbjct: 136 LNRQDAD-IAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKM--FKRVLYIDIDVHHG 192
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 491
+G + FY RV+ +S H++ G FFP + +VG KG+ + +NV N GM D
Sbjct: 193 DGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHI--RDVGAEKGKYYALNVPLND-GMDDE 247
Query: 492 EYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR 551
+ + F+ +I + + PE V++ G D+ D LG +S + +A +L++
Sbjct: 248 SFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPL 307
Query: 552 IILALEGGYNISSISYAMTLCTKALLG 578
++L GGY I +++ T +G
Sbjct: 308 MVLG-GGGYTIRNVARCWCYETAVAVG 333
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 47/130 (36%), Positives = 70/130 (53%)
Query: 161 LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 219
LN + A +AI G HHA++ E GFC N++ + L RVL +D DVHHG
Sbjct: 136 LNRQDAD-IAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKM--FKRVLYIDIDVHHG 192
Query: 220 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP 279
+G + FY RV+ +S H++ G FFP + +VG KG+ + +NV N GM D
Sbjct: 193 DGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHI--RDVGAEKGKYYALNVPLND-GMDDE 247
Query: 280 EYIAAFQQVI 289
+ + F+ +I
Sbjct: 248 SFRSLFRPLI 257
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D DVHHG+G + FY RV+ +S H++ G FFP + +VG KG+ + +
Sbjct: 181 RVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHI--RDVGAEKGKYYAL 236
Query: 362 NVAWNKVVD 370
NV N +D
Sbjct: 237 NVPLNDGMD 245
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 241 (89.9 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 62/201 (30%), Positives = 98/201 (48%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ ++ L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVISILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYRQLFQPVIKQVVDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P +++ G D+ D LG +S + ++K ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKGFKIPLLVLG-GGGYTVRNVARC 306
Query: 569 MTLCTKAL----LGDPLPLLE 585
T T L + D LP E
Sbjct: 307 WTFETSLLVEESISDELPYSE 327
Score = 185 (70.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 43/113 (38%), Positives = 62/113 (54%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ ++ L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVISILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYRQLFQPVI 240
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 238 (88.8 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 60/201 (29%), Positives = 99/201 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVISQVVDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S + ++K+ ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRNVARC 306
Query: 567 --YAMTLCTKALLGDPLPLLE 585
Y +L + + + LP E
Sbjct: 307 WTYETSLLVEEAISEELPYSE 327
Score = 183 (69.5 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVI 240
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 238 (88.8 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 58/193 (30%), Positives = 96/193 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVVDYY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P +++ G D+ D LG +S + ++K+ ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRNVARC 306
Query: 569 MTLCTKALLGDPL 581
T T L+ + +
Sbjct: 307 WTYETSLLVDEAI 319
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVI 240
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 238 (88.8 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 60/201 (29%), Positives = 99/201 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVISQVVDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S + ++K+ ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRNVARC 306
Query: 567 --YAMTLCTKALLGDPLPLLE 585
Y +L + + + LP E
Sbjct: 307 WTYETSLLVEEAISEELPYSE 327
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVI 240
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 238 (88.8 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 60/201 (29%), Positives = 99/201 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVISQVVDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S + ++K+ ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRNVARC 306
Query: 567 --YAMTLCTKALLGDPLPLLE 585
Y +L + + + LP E
Sbjct: 307 WTYETSLLVEEAISEELPYSE 327
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVI 240
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 238 (88.8 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 60/201 (29%), Positives = 99/201 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVISQVVDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S + ++K+ ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRNVARC 306
Query: 567 --YAMTLCTKALLGDPLPLLE 585
Y +L + + + LP E
Sbjct: 307 WTYETSLLVEEAISEELPYSE 327
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVI 240
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 237 (88.5 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 60/201 (29%), Positives = 99/201 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVVDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S + ++K+ ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRNVARC 306
Query: 567 --YAMTLCTKALLGDPLPLLE 585
Y +L + + + LP E
Sbjct: 307 WTYETSLLVEEAISEELPYSE 327
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVI 240
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 237 (88.5 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 60/201 (29%), Positives = 99/201 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVVDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S + ++K+ ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRNVARC 306
Query: 567 --YAMTLCTKALLGDPLPLLE 585
Y +L + + + LP E
Sbjct: 307 WTYETSLLVEEAISEELPYSE 327
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVI 240
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 237 (88.5 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 60/201 (29%), Positives = 99/201 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVVDFY 247
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS-- 566
P +++ G D+ D LG +S + ++K+ ++L GGY + +++
Sbjct: 248 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRNVARC 306
Query: 567 --YAMTLCTKALLGDPLPLLE 585
Y +L + + + LP E
Sbjct: 307 WTYETSLLVEEAISEELPYSE 327
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 192 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVI 240
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 163 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 219
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 220 NVPLRDGID 228
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 235 (87.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 78/294 (26%), Positives = 133/294 (45%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 45 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 101
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 102 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 160
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S + FP + D +
Sbjct: 161 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS--EVSMVNNFPGTGDL--RD 214
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ +I + + P V++ G D+ D LG
Sbjct: 215 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLG 273
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + +A +K ++L GGY I +++ T T L +P
Sbjct: 274 CFNLTVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 166 (63.5 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 39/113 (34%), Positives = 60/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
+ FP + D ++G GKG+ + VN + G+ D Y F+ +I
Sbjct: 199 --EVSMVNNFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPII 246
Score = 43 (20.2 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NVA +KKG
Sbjct: 425 EDEGEGGRRNVADHKKG 441
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 235 (87.8 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 56/190 (29%), Positives = 98/190 (51%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 148 HHAKKCEASGFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYATDRVMTVS 205
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H++ G +FP + ++G G G+ +++NV + G+ D Y F+ ++ + F
Sbjct: 206 FHKF--GDYFPGTGHI--QDIGYGSGKYYSLNVPLDD-GIDDESYHLLFKPIMGKVMEIF 260
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
P V++ G D+ D LG +S + +A ++++ ++L GGY I +++
Sbjct: 261 RPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLG-GGGYTIRNVARC 319
Query: 569 MTLCTKALLG 578
T LG
Sbjct: 320 WCYETGVALG 329
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 46/143 (32%), Positives = 74/143 (51%)
Query: 148 CEPYVDNHVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGL 206
C+ Y V SV +AI G HHA++ E GFC N++ +A L H
Sbjct: 118 CQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-- 175
Query: 207 SRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFN 266
RVL +D D+HHG+G + FY RV+ +S H++ G +FP + ++G G G+ ++
Sbjct: 176 ERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKF--GDYFPGTGHI--QDIGYGSGKYYS 231
Query: 267 VNVAWNKKGMSDPEYIAAFQQVI 289
+NV + G+ D Y F+ ++
Sbjct: 232 LNVPLDD-GIDDESYHLLFKPIM 253
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 288 VILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAG 347
V+ + L H RVL +D D+HHG+G + FY RV+ +S H++ G +FP +
Sbjct: 165 VLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKF--GDYFPGTGHI- 219
Query: 348 PHNVGEGKGEGFNVNVAWNKVVDSVLNGESAH 379
++G G G+ +++NV +D ++ ES H
Sbjct: 220 -QDIGYGSGKYYSLNVP----LDDGIDDESYH 246
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 213 (80.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 51/158 (32%), Positives = 80/158 (50%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 59 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 116
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI + +
Sbjct: 117 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVVDFY 172
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 546
P +++ G D+ D LG +S + ++K+
Sbjct: 173 QPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 210
Score = 183 (69.5 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ + L H RVL +D D+HHG+G Q FY RV+ +S
Sbjct: 59 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 116
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y + FFP + D + VG G + +NV + G+ D Y FQ VI
Sbjct: 117 FHKYGN-YFFPGTGDM--YEVGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVI 165
Score = 122 (48.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNV 361
RVL +D D+HHG+G Q FY RV+ +S H+Y + FFP + D + VG G + +
Sbjct: 88 RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGTGDM--YEVGAESGRYYCL 144
Query: 362 NVAWNKVVD 370
NV +D
Sbjct: 145 NVPLRDGID 153
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 233 (87.1 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 61/207 (29%), Positives = 102/207 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ +A L H RV+ +D DVHHG+G + F++ RVL +S
Sbjct: 174 HHAKKAEASGFCYVNDIVLAILQLLRIH--PRVMYIDIDVHHGDGVEQAFWSTDRVLTVS 231
Query: 449 VHRYDHGSFFPHS---KDAGP-HNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPI 504
H+YD +FFP + GP H + G NV + G+ D Y+ F+ V+
Sbjct: 232 FHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPL---HDGIDDESYVQLFKDVVGAC 288
Query: 505 AYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISS 564
+F P +++ G D+ D LG ++ A+ + K +++ GGY +
Sbjct: 289 VSKFRPAAIVLQCGADSLGCDRLGCFNLNVAAHGACVAYTKTFGLPMLVVG-GGGYTPRN 347
Query: 565 ISYAMTLCTKALLG--DPL-PLLESDL 588
+S A T L+ D + P++ S++
Sbjct: 348 VSRAWAHETSILIDAQDKINPVIPSNV 374
Score = 188 (71.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 42/117 (35%), Positives = 63/117 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RV+ +D DVHHG+G + F++ RVL +S
Sbjct: 174 HHAKKAEASGFCYVNDIVLAILQLLRIH--PRVMYIDIDVHHGDGVEQAFWSTDRVLTVS 231
Query: 237 VHRYDHGSFFPHS---KDAGP-HNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+YD +FFP + GP H + G NV + G+ D Y+ F+ V+
Sbjct: 232 FHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPL---HDGIDDESYVQLFKDVV 285
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 302 RVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHS---KDAGP-HNVGEGKGE 357
RV+ +D DVHHG+G + F++ RVL +S H+YD +FFP + GP H + G
Sbjct: 203 RVMYIDIDVHHGDGVEQAFWSTDRVLTVSFHKYDKENFFPGTGPLDSTGPTHPLNPGAHH 262
Query: 358 GFNV 361
NV
Sbjct: 263 AVNV 266
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 217 (81.4 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 65/185 (35%), Positives = 93/185 (50%)
Query: 380 GVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 438
GVAI G HHA D GFC+FN++++AA +AL + +VLI+D DVHHG+GT +
Sbjct: 115 GVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLC 174
Query: 439 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQ 498
++ +S H D FP K A +VG N+ G D E+++ F
Sbjct: 175 AERDEIITLSFH-CDKN--FPARKPASSMDVGYA-----------NQTG--DEEFLSTFI 218
Query: 499 QVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA-QGRIILA-- 555
QV+ P+L+L AG D +D LG +S A A ++ LA Q I +A
Sbjct: 219 QVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACV 278
Query: 556 LEGGY 560
+ GGY
Sbjct: 279 IGGGY 283
Score = 164 (62.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 39/98 (39%), Positives = 54/98 (55%)
Query: 168 GVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 226
GVAI G HHA D GFC+FN++++AA +AL + +VLI+D DVHHG+GT +
Sbjct: 115 GVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLC 174
Query: 227 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 264
++ +S H D FP K A +VG G
Sbjct: 175 AERDEIITLSFH-CDKN--FPARKPASSMDVGYANQTG 209
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 217 (81.4 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 65/185 (35%), Positives = 93/185 (50%)
Query: 380 GVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 438
GVAI G HHA D GFC+FN++++AA +AL + +VLI+D DVHHG+GT +
Sbjct: 115 GVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLC 174
Query: 439 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQ 498
++ +S H D FP K A +VG N+ G D E+++ F
Sbjct: 175 AERDEIITLSFH-CDKN--FPARKPASSMDVGYA-----------NQTG--DEEFLSTFI 218
Query: 499 QVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA-QGRIILA-- 555
QV+ P+L+L AG D +D LG +S A A ++ LA Q I +A
Sbjct: 219 QVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACV 278
Query: 556 LEGGY 560
+ GGY
Sbjct: 279 IGGGY 283
Score = 164 (62.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 39/98 (39%), Positives = 54/98 (55%)
Query: 168 GVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 226
GVAI G HHA D GFC+FN++++AA +AL + +VLI+D DVHHG+GT +
Sbjct: 115 GVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLC 174
Query: 227 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 264
++ +S H D FP K A +VG G
Sbjct: 175 AERDEIITLSFH-CDKN--FPARKPASSMDVGYANQTG 209
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 218 (81.8 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 63/196 (32%), Positives = 100/196 (51%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVA-AKYALDNHGLSRVLILDWDVHH 430
+ GE+ H V I HHA +D GFCI+N+++VA AK+ GL +V +D D HH
Sbjct: 116 IYEGEADH-VFNIAGGLHHALRDAASGFCIYNDLAVAIAKFR--EKGL-KVAYVDLDAHH 171
Query: 431 GNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 489
G+G Q +FY+DP VL IS+H + G + FP + +GEG G +N+
Sbjct: 172 GDGVQWLFYSDPGVLTISIH--ETGRYLFPGTGSIT--ELGEGAAYGTKINIPLEPY-TE 226
Query: 490 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 549
D ++ A ++++ + +F P++++ G D+ DPL + A+ L LA
Sbjct: 227 DDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAH 286
Query: 550 ----GRIILALEGGYN 561
GR + GGY+
Sbjct: 287 EVCGGRWLAGGGGGYD 302
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 47/132 (35%), Positives = 73/132 (55%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVA-AKYALDNHGLSRVLILDWDVHH 218
+ GE+ H V I HHA +D GFCI+N+++VA AK+ GL +V +D D HH
Sbjct: 116 IYEGEADH-VFNIAGGLHHALRDAASGFCIYNDLAVAIAKFR--EKGL-KVAYVDLDAHH 171
Query: 219 GNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 277
G+G Q +FY+DP VL IS+H + G + FP + +GEG G +N+
Sbjct: 172 GDGVQWLFYSDPGVLTISIH--ETGRYLFPGTGSIT--ELGEGAAYGTKINIPLEPY-TE 226
Query: 278 DPEYIAAFQQVI 289
D ++ A ++++
Sbjct: 227 DDSWLWALEEIV 238
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 218 (81.8 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 63/196 (32%), Positives = 100/196 (51%)
Query: 372 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVA-AKYALDNHGLSRVLILDWDVHH 430
+ GE+ H V I HHA +D GFCI+N+++VA AK+ GL +V +D D HH
Sbjct: 116 IYEGEADH-VFNIAGGLHHALRDAASGFCIYNDLAVAIAKFR--EKGL-KVAYVDLDAHH 171
Query: 431 GNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 489
G+G Q +FY+DP VL IS+H + G + FP + +GEG G +N+
Sbjct: 172 GDGVQWLFYSDPGVLTISIH--ETGRYLFPGTGSIT--ELGEGAAYGTKINIPLEPY-TE 226
Query: 490 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 549
D ++ A ++++ + +F P++++ G D+ DPL + A+ L LA
Sbjct: 227 DDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAH 286
Query: 550 ----GRIILALEGGYN 561
GR + GGY+
Sbjct: 287 EVCGGRWLAGGGGGYD 302
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 47/132 (35%), Positives = 73/132 (55%)
Query: 160 VLNGESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVA-AKYALDNHGLSRVLILDWDVHH 218
+ GE+ H V I HHA +D GFCI+N+++VA AK+ GL +V +D D HH
Sbjct: 116 IYEGEADH-VFNIAGGLHHALRDAASGFCIYNDLAVAIAKFR--EKGL-KVAYVDLDAHH 171
Query: 219 GNGTQAMFYNDPRVLYISVHRYDHGSF-FPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMS 277
G+G Q +FY+DP VL IS+H + G + FP + +GEG G +N+
Sbjct: 172 GDGVQWLFYSDPGVLTISIH--ETGRYLFPGTGSIT--ELGEGAAYGTKINIPLEPY-TE 226
Query: 278 DPEYIAAFQQVI 289
D ++ A ++++
Sbjct: 227 DDSWLWALEEIV 238
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 220 (82.5 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 79/294 (26%), Positives = 128/294 (43%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
N+GL R + + + H + +++D + ++ R D+ S +SK NVGE
Sbjct: 45 NYGLYRKMEI-YRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS--EYSKQMQRFNVGEDC 101
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V +A+ G HHA++ E GFC N++ +A
Sbjct: 102 PVFDGLFEFCQLSTG-GSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLA 160
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L H RVL +D D+HHG+G + FY RV+ +S H+Y G +FP + D +
Sbjct: 161 ILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDL--RD 214
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + VN + G+ D Y F+ VI I P V + D
Sbjct: 215 IGAGKGKYYAVNFPM-RDGIDDESYGQIFKPVITKIGEITFPTKVCLEIQPVHSAGDQFW 273
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
+ +A +K ++L GGY I +++ T T L +P
Sbjct: 274 VFVYCVKGHAKCVEVVKTFNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 200 (75.5 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 43/113 (38%), Positives = 64/113 (56%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVI 289
H+Y G +FP + D ++G GKG+ + VN + G+ D Y F+ VI
Sbjct: 199 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKPVI 246
Score = 39 (18.8 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 471 EGKGEGFNVNVAWNKKG 487
E +GEG NV +KKG
Sbjct: 425 EDEGEGGRRNVTDHKKG 441
>GENEDB_PFALCIPARUM|PF14_0690 [details] [associations]
symbol:PF14_0690 "histone deactylase, putative"
species:5833 "Plasmodium falciparum" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0006325 "chromatin
organization" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR002110
SMART:SM00248 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006355
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:AE014187 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
RefSeq:XP_001348864.2 ProteinModelPortal:Q8IKB6 IntAct:Q8IKB6
MINT:MINT-1556967 PRIDE:Q8IKB6 EnsemblProtists:PF14_0690:mRNA
GeneID:812272 KEGG:pfa:PF14_0690 EuPathDB:PlasmoDB:PF3D7_1472200
Uniprot:Q8IKB6
Length = 2251
Score = 139 (54.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 60/210 (28%), Positives = 100/210 (47%)
Query: 415 NHGLSRVLILDW-DVHHGNGTQAMFYNDPR-VLYISVHRYDHGSFFPHSKDAGPHNVGEG 472
N GL ++ + ++ D++ G + ND + + + SVH YD G F+P + G V
Sbjct: 1750 NLGLKKLTVNEYIDIYSWKGWKDN--NDKKNIFFSSVHAYD-GYFYPGT---GYDTV--- 1800
Query: 473 KGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPL--GGC 530
+ E + +NV KK M+ E++ F IL Y F P L+ +SAG+D D + G
Sbjct: 1801 ELEPYIINVTL-KKNMTSLEFLNIFHSKILIHLYYFKPNLLFLSAGFDGHQLDYVNNGFV 1859
Query: 531 KVSPEAYAHFTHWLKALAQGR----IILALEGGYNISSISYAMTLCTKALLGDPLPLLES 586
K + Y + T + +L Q + II LEGGYN S A ++ + ++L L +
Sbjct: 1860 KKNTSTYFYLTKLVLSL-QNKLNFPIISVLEGGYNTSK-DMA-SVFSLSVLEHVLSFYYN 1916
Query: 587 DLDI---NSSAVTSIKETISSHKAYWSSLK 613
D+ + +K+ I + Y + LK
Sbjct: 1917 DISFFRKKEIKLKDLKKNIERMERYKNDLK 1946
Score = 134 (52.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 36/97 (37%), Positives = 50/97 (51%)
Query: 148 CEPY-VDNHVVDSVLNGESAHGVAIIRPPGHH-----AEQ----DEPC-----GFCIFNN 192
C+ Y + N+ S++ ++RPPGHH A Q DE GFCI NN
Sbjct: 1657 CKKYRIQNN---SIIPNNRKKIFCVVRPPGHHLGTFGAAQFNLTDEDVAAGSQGFCILNN 1713
Query: 193 VSVAAKYALDNHG-LSRVLILDWDVHHGNGTQAMFYN 228
V+V YA + R+ I+D+DVHHGNGT+ + N
Sbjct: 1714 VAVGLAYAKYTYKKFERIAIIDFDVHHGNGTEQIIRN 1750
Score = 131 (51.2 bits), Expect = 0.00027, P = 0.00027
Identities = 32/73 (43%), Positives = 41/73 (56%)
Query: 383 IIRPPGHH-----AEQ----DEPC-----GFCIFNNVSVAAKYALDNHG-LSRVLILDWD 427
++RPPGHH A Q DE GFCI NNV+V YA + R+ I+D+D
Sbjct: 1678 VVRPPGHHLGTFGAAQFNLTDEDVAAGSQGFCILNNVAVGLAYAKYTYKKFERIAIIDFD 1737
Query: 428 VHHGNGTQAMFYN 440
VHHGNGT+ + N
Sbjct: 1738 VHHGNGTEQIIRN 1750
Score = 75 (31.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 302 RVLILDWDVHHGNGTQAMFYN 322
R+ I+D+DVHHGNGT+ + N
Sbjct: 1730 RIAIIDFDVHHGNGTEQIIRN 1750
>UNIPROTKB|Q8IKB6 [details] [associations]
symbol:PF14_0690 "Histone deacetylase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0004407 "histone deacetylase
activity" evidence=ISS] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] InterPro:IPR002110 SMART:SM00248 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0006355 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AE014187
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
RefSeq:XP_001348864.2 ProteinModelPortal:Q8IKB6 IntAct:Q8IKB6
MINT:MINT-1556967 PRIDE:Q8IKB6 EnsemblProtists:PF14_0690:mRNA
GeneID:812272 KEGG:pfa:PF14_0690 EuPathDB:PlasmoDB:PF3D7_1472200
Uniprot:Q8IKB6
Length = 2251
Score = 139 (54.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 60/210 (28%), Positives = 100/210 (47%)
Query: 415 NHGLSRVLILDW-DVHHGNGTQAMFYNDPR-VLYISVHRYDHGSFFPHSKDAGPHNVGEG 472
N GL ++ + ++ D++ G + ND + + + SVH YD G F+P + G V
Sbjct: 1750 NLGLKKLTVNEYIDIYSWKGWKDN--NDKKNIFFSSVHAYD-GYFYPGT---GYDTV--- 1800
Query: 473 KGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPL--GGC 530
+ E + +NV KK M+ E++ F IL Y F P L+ +SAG+D D + G
Sbjct: 1801 ELEPYIINVTL-KKNMTSLEFLNIFHSKILIHLYYFKPNLLFLSAGFDGHQLDYVNNGFV 1859
Query: 531 KVSPEAYAHFTHWLKALAQGR----IILALEGGYNISSISYAMTLCTKALLGDPLPLLES 586
K + Y + T + +L Q + II LEGGYN S A ++ + ++L L +
Sbjct: 1860 KKNTSTYFYLTKLVLSL-QNKLNFPIISVLEGGYNTSK-DMA-SVFSLSVLEHVLSFYYN 1916
Query: 587 DLDI---NSSAVTSIKETISSHKAYWSSLK 613
D+ + +K+ I + Y + LK
Sbjct: 1917 DISFFRKKEIKLKDLKKNIERMERYKNDLK 1946
Score = 134 (52.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 36/97 (37%), Positives = 50/97 (51%)
Query: 148 CEPY-VDNHVVDSVLNGESAHGVAIIRPPGHH-----AEQ----DEPC-----GFCIFNN 192
C+ Y + N+ S++ ++RPPGHH A Q DE GFCI NN
Sbjct: 1657 CKKYRIQNN---SIIPNNRKKIFCVVRPPGHHLGTFGAAQFNLTDEDVAAGSQGFCILNN 1713
Query: 193 VSVAAKYALDNHG-LSRVLILDWDVHHGNGTQAMFYN 228
V+V YA + R+ I+D+DVHHGNGT+ + N
Sbjct: 1714 VAVGLAYAKYTYKKFERIAIIDFDVHHGNGTEQIIRN 1750
Score = 131 (51.2 bits), Expect = 0.00027, P = 0.00027
Identities = 32/73 (43%), Positives = 41/73 (56%)
Query: 383 IIRPPGHH-----AEQ----DEPC-----GFCIFNNVSVAAKYALDNHG-LSRVLILDWD 427
++RPPGHH A Q DE GFCI NNV+V YA + R+ I+D+D
Sbjct: 1678 VVRPPGHHLGTFGAAQFNLTDEDVAAGSQGFCILNNVAVGLAYAKYTYKKFERIAIIDFD 1737
Query: 428 VHHGNGTQAMFYN 440
VHHGNGT+ + N
Sbjct: 1738 VHHGNGTEQIIRN 1750
Score = 75 (31.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 302 RVLILDWDVHHGNGTQAMFYN 322
R+ I+D+DVHHGNGT+ + N
Sbjct: 1730 RIAIIDFDVHHGNGTEQIIRN 1750
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 207 (77.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 68/215 (31%), Positives = 94/215 (43%)
Query: 371 SVLNGES-AHGVAIIRPPG--HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
S+L E A G + P G HH D GFC N+ V A AL G +RV +D D
Sbjct: 106 SLLAAELVARGHRVFNPGGGTHHGFADRAGGFCYLND-PVLAILALQRLGCARVAYVDID 164
Query: 428 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 487
HH +G + F V IS+H F +D + G G N+ VA +
Sbjct: 165 AHHCDGVASAFQGSQTVRMISIHEARRWPFTGALED----DAG---GAALNLPVA---RD 214
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 547
++D Y ++ILP F P+ V++ G DA DPL +S A+ L AL
Sbjct: 215 LNDSAYALILDRLILPAVAGFRPDAVVLQCGADAVAEDPLSRLALSNCAHRDTVRALAAL 274
Query: 548 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++L GGYN S++ A T L G +P
Sbjct: 275 CPRLLVLG-GGGYNPWSVARAWTGVWATLSGAEIP 308
Score = 127 (49.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 43/139 (30%), Positives = 59/139 (42%)
Query: 159 SVLNGES-AHGVAIIRPPG--HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
S+L E A G + P G HH D GFC N+ V A AL G +RV +D D
Sbjct: 106 SLLAAELVARGHRVFNPGGGTHHGFADRAGGFCYLND-PVLAILALQRLGCARVAYVDID 164
Query: 216 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 275
HH +G + F V IS+H F +D + G N+ VA +
Sbjct: 165 AHHCDGVASAFQGSQTVRMISIHEARRWPFTGALED-------DAGGAALNLPVA---RD 214
Query: 276 MSDPEYIAAFQQVILPMYA 294
++D Y ++ILP A
Sbjct: 215 LNDSAYALILDRLILPAVA 233
Score = 38 (18.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 279 PEYIAAFQQ 287
P+YIAA QQ
Sbjct: 59 PDYIAALQQ 67
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 185 (70.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 39/102 (38%), Positives = 59/102 (57%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 115 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 172
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 278
H+Y G +FP + D ++G GKG+ + VN + G+ D
Sbjct: 173 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDD 209
Score = 185 (70.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 39/102 (38%), Positives = 59/102 (57%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++ E GFC N++ +A L H RVL +D D+HHG+G + FY RV+ +S
Sbjct: 115 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 172
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSD 490
H+Y G +FP + D ++G GKG+ + VN + G+ D
Sbjct: 173 FHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDD 209
Score = 146 (56.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 44/173 (25%), Positives = 82/173 (47%)
Query: 203 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGK 261
N+GL R + + + H N + +++D + ++ R D+ S +SK + +
Sbjct: 44 NYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRSIRPDNMS--EYSKQMQRSSAVKLN 100
Query: 262 GEGFNVNVAW----NKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQ 317
+ ++ V W + S+ ++L + L + RVL +D D+HHG+G +
Sbjct: 101 KQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH-QRVLYIDIDIHHGDGVE 159
Query: 318 AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKVVD 370
FY RV+ +S H+Y G +FP + D ++G GKG+ + VN +D
Sbjct: 160 EAFYTTDRVMTVSFHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPLRDGID 208
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 201 (75.8 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 57/222 (25%), Positives = 101/222 (45%)
Query: 360 NVNVAWNKVVDSVLNGESAHGVAIIRPPG--HHAEQDEPCGFCIFNNVSVAAKYALDNHG 417
++N A K+V V E+ + + G HH + GFC N+V ++ N
Sbjct: 173 SINAA-RKIVQQVK--ETKDQIIAVNWYGGRHHCHKSHAAGFCYVNDVVLSINILRKN-- 227
Query: 418 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 477
L V LD D+HHG+G + F +V S+HRYD G F+P G ++ + +
Sbjct: 228 LGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIG-FYP-----GTGSLKSSRENTY 281
Query: 478 NVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAY 537
N+ +KG++D + ++++ P+ F P +++ G D D ++ + Y
Sbjct: 282 NIPT---EKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLALDTHKEWNMTIKGY 338
Query: 538 AHFTHW-LKALAQGRIILALEGGYNISSISYAMTLCTKALLG 578
W L ++ I+L GGY+ + + T T ++LG
Sbjct: 339 RDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLG 380
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 36/129 (27%), Positives = 63/129 (48%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HH + GFC N+V ++ N L V LD D+HHG+G + F +V S
Sbjct: 201 HHCHKSHAAGFCYVNDVVLSINILRKN--LGSVFYLDLDLHHGDGVENAFKFSKKVATCS 258
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+HRYD G F+P G ++ + +N+ +KG++D + ++++ P+ +
Sbjct: 259 IHRYDIG-FYP-----GTGSLKSSRENTYNIPT---EKGLNDSSMLWIIKEIVAPL--IS 307
Query: 297 NHGLSRVLI 305
N G ++I
Sbjct: 308 NFGPRAIVI 316
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 201 (75.8 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 57/222 (25%), Positives = 101/222 (45%)
Query: 360 NVNVAWNKVVDSVLNGESAHGVAIIRPPG--HHAEQDEPCGFCIFNNVSVAAKYALDNHG 417
++N A K+V V E+ + + G HH + GFC N+V ++ N
Sbjct: 173 SINAA-RKIVQQVK--ETKDQIIAVNWYGGRHHCHKSHAAGFCYVNDVVLSINILRKN-- 227
Query: 418 LSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 477
L V LD D+HHG+G + F +V S+HRYD G F+P G ++ + +
Sbjct: 228 LGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIG-FYP-----GTGSLKSSRENTY 281
Query: 478 NVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAY 537
N+ +KG++D + ++++ P+ F P +++ G D D ++ + Y
Sbjct: 282 NIPT---EKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLALDTHKEWNMTIKGY 338
Query: 538 AHFTHW-LKALAQGRIILALEGGYNISSISYAMTLCTKALLG 578
W L ++ I+L GGY+ + + T T ++LG
Sbjct: 339 RDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLG 380
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 36/129 (27%), Positives = 63/129 (48%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HH + GFC N+V ++ N L V LD D+HHG+G + F +V S
Sbjct: 201 HHCHKSHAAGFCYVNDVVLSINILRKN--LGSVFYLDLDLHHGDGVENAFKFSKKVATCS 258
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPMYALD 296
+HRYD G F+P G ++ + +N+ +KG++D + ++++ P+ +
Sbjct: 259 IHRYDIG-FYP-----GTGSLKSSRENTYNIPT---EKGLNDSSMLWIIKEIVAPL--IS 307
Query: 297 NHGLSRVLI 305
N G ++I
Sbjct: 308 NFGPRAIVI 316
>SGD|S000006037 [details] [associations]
symbol:HOS3 "Trichostatin A-insensitive homodimeric histone
deacetylase (HDAC)" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000083 "regulation of transcription involved in
G1/S phase of mitotic cell cycle" evidence=IGI;IPI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005935 "cellular bud neck"
evidence=IDA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] SGD:S000006037 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0005935 GO:GO:0045944
GO:GO:0006351 EMBL:BK006949 EMBL:U43503 GO:GO:0070932 GO:GO:0000083
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 PIR:S62006
RefSeq:NP_015209.1 ProteinModelPortal:Q02959 DIP:DIP-8047N
IntAct:Q02959 MINT:MINT-2781063 STRING:Q02959 PaxDb:Q02959
PeptideAtlas:Q02959 EnsemblFungi:YPL116W GeneID:855987
KEGG:sce:YPL116W CYGD:YPL116w HOGENOM:HOG000246666 KO:K11484
OMA:AAITMYP OrthoDB:EOG4BZR9V NextBio:980834 Genevestigator:Q02959
GermOnline:YPL116W Uniprot:Q02959
Length = 697
Score = 189 (71.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 157 VDSVLNGESAHGVA-----IIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLI 211
VDS+ G SA ++ IRPPGHH P GFC+ NN VA +YA D + ++ V++
Sbjct: 170 VDSIFKGPSAEHISNRAFVAIRPPGHHCHYGTPSGFCLLNNAHVAIEYAYDTYNVTHVVV 229
Query: 212 LDWDVHHGNGTQ 223
LD+D+HHG+GTQ
Sbjct: 230 LDFDLHHGDGTQ 241
Score = 189 (71.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 369 VDSVLNGESAHGVA-----IIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLI 423
VDS+ G SA ++ IRPPGHH P GFC+ NN VA +YA D + ++ V++
Sbjct: 170 VDSIFKGPSAEHISNRAFVAIRPPGHHCHYGTPSGFCLLNNAHVAIEYAYDTYNVTHVVV 229
Query: 424 LDWDVHHGNGTQ 435
LD+D+HHG+GTQ
Sbjct: 230 LDFDLHHGDGTQ 241
Score = 62 (26.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 497 FQQVILPIAYQFNP--ELVLVSAGYDACVNDPLG----GCKVSPEAYAHFTHWLKALAQ- 549
F+ L + Q P LV++SAG+DA + V Y FT LAQ
Sbjct: 345 FRSAKLEMNQQGRPFKGLVVISAGFDASEFEQTSMQRHSVNVPTSFYTTFTKDALKLAQM 404
Query: 550 ---GRIILALEGGYNISSI 565
G+++ +EGGY+ +I
Sbjct: 405 HCHGKVLSLMEGGYSDKAI 423
>UNIPROTKB|Q4K5L2 [details] [associations]
symbol:PFL_5403 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
KEGG:pfl:PFL_5403 PATRIC:19880291
BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
Length = 306
Score = 193 (73.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 59/197 (29%), Positives = 91/197 (46%)
Query: 371 SVLNGESA--HGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
S+L E A HG+A G HHA D P GFCIFN+++V + Y L++ + RVLI D D
Sbjct: 99 SLLAAEQALEHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCD 158
Query: 428 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 487
VH G+GT + + + +S+H + FP K ++ G
Sbjct: 159 VHQGDGTARILQHTADAVTVSLHCEKN---FPARKAQSDWDIPL-------------PMG 202
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 547
M D +Y+ + + + P+LVL AG D +D LG K++ A +
Sbjct: 203 MGDADYLNVVDDTLNYLLPLYQPDLVLYDAGVDVHQDDALGYLKLTDAGVAERDERVMRH 262
Query: 548 AQGR---IILALEGGYN 561
GR ++ + GGY+
Sbjct: 263 CLGRDIPVVGVIGGGYS 279
Score = 162 (62.1 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 159 SVLNGESA--HGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
S+L E A HG+A G HHA D P GFCIFN+++V + Y L++ + RVLI D D
Sbjct: 99 SLLAAEQALEHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCD 158
Query: 216 VHHGNGTQAMFYNDPRVLYISVH 238
VH G+GT + + + +S+H
Sbjct: 159 VHQGDGTARILQHTADAVTVSLH 181
>CGD|CAL0004270 [details] [associations]
symbol:HOS3 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005935
"cellular bud neck" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=IEA] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 168 (64.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 157 VDSVLNGESA--HGVA--IIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLIL 212
VDS+ + H +A +IRPPGHH+ P GFC+ NNV + +YA + +G++ IL
Sbjct: 291 VDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCLLNNVQIGIEYAFEQYGVTHCAIL 350
Query: 213 DWDVHHGNGTQ 223
D D+HHG+G+Q
Sbjct: 351 DIDLHHGDGSQ 361
Score = 168 (64.2 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 369 VDSVLNGESA--HGVA--IIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLIL 424
VDS+ + H +A +IRPPGHH+ P GFC+ NNV + +YA + +G++ IL
Sbjct: 291 VDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCLLNNVQIGIEYAFEQYGVTHCAIL 350
Query: 425 DWDVHHGNGTQ 435
D D+HHG+G+Q
Sbjct: 351 DIDLHHGDGSQ 361
Score = 78 (32.5 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 64/265 (24%), Positives = 106/265 (40%)
Query: 366 NKVVDSVLNGESAHGVAIIRPP--GH---HAEQDEPC--GFCIFNNVSVAAKYALDNHGL 418
+++VD LN +G P G+ H + P G+ N+ A+ +D H L
Sbjct: 380 DEIVDPKLNPRDDYGKRFATYPKVGYFSIHDIKSYPTEIGYATKENIKNASTCIMD-HDL 438
Query: 419 SRVLILDWDVHHGN-GTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 477
+ W+VH + FY + Y+++ + + F +S E + E +
Sbjct: 439 NI-----WNVHLQEWSNEEEFYKHYQTKYVAI--LNRANQFLNSAK----KQYEQEYEEY 487
Query: 478 NVNVAWNKKGMSDPEYIAAFQQVILPIAYQ-FNPELVLVSAGYDAC-VNDPL---GGCKV 532
N+ K + P + Q + P F P L+ +SAG+DA +P G V
Sbjct: 488 LDNLGKYNKYLLKPHLYS--QPLTKPTPPPPFKP-LIAISAGFDASQYENPQMQRHGINV 544
Query: 533 SPEAYAHFTHWLKALAQ----GRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDL 588
Y+ FT + LA+ G+++ LEGGY+ ++S + L D L
Sbjct: 545 PTSFYSTFTKDVVKLAKIHTNGKVLSFLEGGYSDGALSTGIFSHLIGLNNDDEFLWNHSW 604
Query: 589 DINSSAVTSIKETISSHKAYWSSLK 613
S V +KE + K WS K
Sbjct: 605 --GSQQV--MKELVKGCKKNWSPYK 625
>UNIPROTKB|Q5AF34 [details] [associations]
symbol:HOS3 "Likely histone deacetylase Hos3p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 168 (64.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 157 VDSVLNGESA--HGVA--IIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLIL 212
VDS+ + H +A +IRPPGHH+ P GFC+ NNV + +YA + +G++ IL
Sbjct: 291 VDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCLLNNVQIGIEYAFEQYGVTHCAIL 350
Query: 213 DWDVHHGNGTQ 223
D D+HHG+G+Q
Sbjct: 351 DIDLHHGDGSQ 361
Score = 168 (64.2 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 369 VDSVLNGESA--HGVA--IIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLIL 424
VDS+ + H +A +IRPPGHH+ P GFC+ NNV + +YA + +G++ IL
Sbjct: 291 VDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCLLNNVQIGIEYAFEQYGVTHCAIL 350
Query: 425 DWDVHHGNGTQ 435
D D+HHG+G+Q
Sbjct: 351 DIDLHHGDGSQ 361
Score = 78 (32.5 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 64/265 (24%), Positives = 106/265 (40%)
Query: 366 NKVVDSVLNGESAHGVAIIRPP--GH---HAEQDEPC--GFCIFNNVSVAAKYALDNHGL 418
+++VD LN +G P G+ H + P G+ N+ A+ +D H L
Sbjct: 380 DEIVDPKLNPRDDYGKRFATYPKVGYFSIHDIKSYPTEIGYATKENIKNASTCIMD-HDL 438
Query: 419 SRVLILDWDVHHGN-GTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGF 477
+ W+VH + FY + Y+++ + + F +S E + E +
Sbjct: 439 NI-----WNVHLQEWSNEEEFYKHYQTKYVAI--LNRANQFLNSAK----KQYEQEYEEY 487
Query: 478 NVNVAWNKKGMSDPEYIAAFQQVILPIAYQ-FNPELVLVSAGYDAC-VNDPL---GGCKV 532
N+ K + P + Q + P F P L+ +SAG+DA +P G V
Sbjct: 488 LDNLGKYNKYLLKPHLYS--QPLTKPTPPPPFKP-LIAISAGFDASQYENPQMQRHGINV 544
Query: 533 SPEAYAHFTHWLKALAQ----GRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDL 588
Y+ FT + LA+ G+++ LEGGY+ ++S + L D L
Sbjct: 545 PTSFYSTFTKDVVKLAKIHTNGKVLSFLEGGYSDGALSTGIFSHLIGLNNDDEFLWNHSW 604
Query: 589 DINSSAVTSIKETISSHKAYWSSLK 613
S V +KE + K WS K
Sbjct: 605 --GSQQV--MKELVKGCKKNWSPYK 625
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 134 (52.2 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 443 RVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVIL 502
R+LY+ + + HG + D +VG GKG ++VNV + G+ D +Y + V+
Sbjct: 171 RILYVDLDLH-HGD---GTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESVLK 223
Query: 503 PIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNI 562
+ FNP+ V++ G D DP+ ++P ++ +IL GGYN+
Sbjct: 224 EVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNL 282
Query: 563 SSISYAMTLCTKALLG 578
++ + T T +LG
Sbjct: 283 ANTARCWTYLTGVILG 298
Score = 98 (39.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGT 222
HHA++DE GFC N+ +V L R+L +D D+HHG+GT
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGT 185
Score = 98 (39.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGT 434
HHA++DE GFC N+ +V L R+L +D D+HHG+GT
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGT 185
Score = 58 (25.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 266 NVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGT 316
N + W+ + +L + L R+L +D D+HHG+GT
Sbjct: 136 NWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFERILYVDLDLHHGDGT 185
>UNIPROTKB|F1MWX4 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
Length = 386
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 49/176 (27%), Positives = 81/176 (46%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ D G+S+ I+D D H GNG + F D RV +
Sbjct: 141 HHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQGNGHERDFMGDKRVYIM 200
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P + A + V + W G D EY+ ++ + +
Sbjct: 201 DVYNR-H--IYPGDRFAK-------QAIRRKVELEW---GTEDDEYLQKVERNLEKALQE 247
Query: 508 FNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 560
P++V+ +AG D D LGG +SP+ + + +GR I++ GGY
Sbjct: 248 HRPDIVVYNAGTDILEGDRLGGLAISPQGVVKRDELVFRIVRGRQLPILMVTSGGY 303
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V P + +++ G+ A G AI G HH D
Sbjct: 91 ITEIPPVIFLPNFLVQRKVLRP-LRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDRGG 149
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ D G+S+ I+D D H GNG + F D RV + V+
Sbjct: 150 GFCAYADITLAIKFLFDRVEGISKATIVDLDAHQGNGHERDFMGDKRVYIMDVY 203
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 183 (69.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 52/172 (30%), Positives = 83/172 (48%)
Query: 371 SVLNGESA--HGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
S+L E A HG+A G HHA D P GFCIFN+++V ++Y L + + +VLI D D
Sbjct: 99 SLLTAEQALKHGMACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCD 158
Query: 428 VHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKG 487
VH G+GT + + + +S+H + FP K ++ G
Sbjct: 159 VHQGDGTARILADTEDAITVSLHCEKN---FPARKAQSDWDIPL-------------PMG 202
Query: 488 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAH 539
M D Y+ ++ + + P+LVL AG D +D LG +++ + A+
Sbjct: 203 MGDANYLNVVDDLLNYLLPFYKPDLVLYDAGVDVHKDDALGYLQLTDQGVAN 254
Score = 161 (61.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 159 SVLNGESA--HGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
S+L E A HG+A G HHA D P GFCIFN+++V ++Y L + + +VLI D D
Sbjct: 99 SLLTAEQALKHGMACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCD 158
Query: 216 VHHGNGTQAMFYNDPRVLYISVH 238
VH G+GT + + + +S+H
Sbjct: 159 VHQGDGTARILADTEDAITVSLH 181
>UNIPROTKB|E7ETT9 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
Uniprot:E7ETT9
Length = 319
Score = 183 (69.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F +D RV +
Sbjct: 114 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIM 173
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P + A + V + W G D EY+ ++ I +
Sbjct: 174 DVYNR-H--IYPGDRFAK-------QAIRRKVELEW---GTEDDEYLDKVERNIKKSLQE 220
Query: 508 FNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 560
P++V+ +AG D D LGG +SP + + +GR I++ GGY
Sbjct: 221 HLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGY 276
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V P + +++ G+ A G AI G HH D
Sbjct: 64 ITEIPPVIFLPNFLVQRKVLRP-LRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGG 122
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ + G+SR I+D D H GNG + F +D RV + V+
Sbjct: 123 GFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVY 176
>UNIPROTKB|F1PSI9 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
Length = 319
Score = 182 (69.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 49/176 (27%), Positives = 81/176 (46%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F D RV +
Sbjct: 114 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIM 173
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P + A + V + W G D EY+ ++ + +
Sbjct: 174 DVYNR-H--IYPGDRFAK-------QAIRRKVELEW---GTEDDEYLDKVERNLQKALQE 220
Query: 508 FNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 560
P++V+ +AG D D LGG +SP+ + + +GR I++ GGY
Sbjct: 221 HLPDVVVYNAGTDILEGDRLGGLSISPQGIVKRDELVFRVVRGRQVPILMVTSGGY 276
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V +P + +++ G+ A G AI G HH D
Sbjct: 64 ITEIPPVIFLPNFLVQRKVLKP-LRTQTGGTIMAGKLAMERGWAINVGGGFHHCSSDRGG 122
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ + G+SR I+D D H GNG + F D RV + V+
Sbjct: 123 GFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIMDVY 176
>UNIPROTKB|Q96DB2 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
Length = 347
Score = 183 (69.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F +D RV +
Sbjct: 142 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIM 201
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P + A + V + W G D EY+ ++ I +
Sbjct: 202 DVYNR-H--IYPGDRFAK-------QAIRRKVELEW---GTEDDEYLDKVERNIKKSLQE 248
Query: 508 FNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 560
P++V+ +AG D D LGG +SP + + +GR I++ GGY
Sbjct: 249 HLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGY 304
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V P + +++ G+ A G AI G HH D
Sbjct: 92 ITEIPPVIFLPNFLVQRKVLRP-LRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGG 150
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ + G+SR I+D D H GNG + F +D RV + V+
Sbjct: 151 GFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVY 204
>UNIPROTKB|G8JYB7 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform d" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 PANTHER:PTHR10625 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 GO:GO:0033558
RefSeq:NP_001255270.1 ProteinModelPortal:G8JYB7 SMR:G8JYB7
EnsemblMetazoa:F41H10.6d WormBase:F41H10.6d Uniprot:G8JYB7
Length = 138
Score = 164 (62.8 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 21 CGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDNHLL 63
CGR++ EH+M+H +S+ HP+ALS ADLSVWCY C++YV N L
Sbjct: 78 CGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPAL 120
Score = 109 (43.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 65 LLIYLYGV-MYVNP---MSIIITEHPLALSFADLSVWCYVCEAYVDNHLL 110
L Y Y +VN M + + HP+ALS ADLSVWCY C++YV N L
Sbjct: 71 LTCYKYNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPAL 120
>ASPGD|ASPL0000069638 [details] [associations]
symbol:hosB species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001304 EMBL:AACD01000117 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K11484
OrthoDB:EOG4BZR9V RefSeq:XP_664623.1 ProteinModelPortal:Q5AXG1
EnsemblFungi:CADANIAT00000457 GeneID:2870089 KEGG:ani:AN7019.2
HOGENOM:HOG000170608 OMA:DLYLCSE Uniprot:Q5AXG1
Length = 1125
Score = 173 (66.0 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 39/112 (34%), Positives = 57/112 (50%)
Query: 157 VDSVLN-GESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 215
+D+V + G + IRPPGHH P GFC NNV V YA H L+ ILD+D
Sbjct: 346 IDAVFSPGPTKRAFVCIRPPGHHCSSGNPSGFCWINNVHVGISYAAMTHDLTHAAILDFD 405
Query: 216 VHHGNGTQAMFYN-DPRVLYISVHRYDH-----GSFFPHSKDAGPHNVGEGK 261
+HHG+G+Q + + + + L + H G F H ++ P +GE +
Sbjct: 406 LHHGDGSQDIAWEQNKKALAAPKNAAAHKKAMVGYFSLHDINSYPCEMGEAE 457
Score = 173 (66.0 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 39/112 (34%), Positives = 57/112 (50%)
Query: 369 VDSVLN-GESAHGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWD 427
+D+V + G + IRPPGHH P GFC NNV V YA H L+ ILD+D
Sbjct: 346 IDAVFSPGPTKRAFVCIRPPGHHCSSGNPSGFCWINNVHVGISYAAMTHDLTHAAILDFD 405
Query: 428 VHHGNGTQAMFYN-DPRVLYISVHRYDH-----GSFFPHSKDAGPHNVGEGK 473
+HHG+G+Q + + + + L + H G F H ++ P +GE +
Sbjct: 406 LHHGDGSQDIAWEQNKKALAAPKNAAAHKKAMVGYFSLHDINSYPCEMGEAE 457
Score = 69 (29.3 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 513 VLVSAGYDACVNDPLG----GCKVSPEAYAHFTHWLKALAQ-------GRIILALEGGYN 561
+ +SAG+DA + +G V E YA FT + +A+ GRI+ LEGGY+
Sbjct: 527 IFISAGFDASEWEGMGMQRHKVNVPTEFYARFTADVVRMAEEEGLGVDGRIVSVLEGGYS 586
Query: 562 ISSISYAMTLCTKALLGD 579
+++ + L + LGD
Sbjct: 587 NRALTTGV-LSHLSGLGD 603
>UNIPROTKB|Q9GKU5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
fascicularis" [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
Length = 347
Score = 182 (69.1 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F +D RV +
Sbjct: 142 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIM 201
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P + A + V + W G D EY+ ++ I +
Sbjct: 202 DVYNR-H--IYPGDRFAK-------QAIRRKVELEW---GTEDDEYLDKVERNIEKSLQE 248
Query: 508 FNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 560
P++V+ +AG D D LGG +SP + + +GR I++ GGY
Sbjct: 249 HLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRHVPILMVTSGGY 304
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V P + +++ G+ A G AI G HH D
Sbjct: 92 ITEIPPVIFLPNFLVQRKVLRP-LRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGG 150
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ + G+SR I+D D H GNG + F +D RV + V+
Sbjct: 151 GFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVY 204
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 185 (70.2 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 73/294 (24%), Positives = 129/294 (43%)
Query: 297 NHGLSRVLILDWDVHHGNGTQ-AMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGE-- 353
++GL R + + + H N + +++D + ++ R D S + K NVG+
Sbjct: 32 SYGLYRKMEI-YRPHKANAEEMTKYHSDDYIKFLRFIRPD--SMSEYIKQMQRFNVGQDC 88
Query: 354 ----GKGEGFNVNVAWNKVVDSVLNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVA 408
G E ++ V +V + +A+ HHA+ E GFC N++ +A
Sbjct: 89 PVFNGLSEFCQLSTG-GSVASAVKLNKQQTDIAVNWAGDLHHAKNSEASGFCYVNDIVLA 147
Query: 409 AKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHN 468
L L RVL +D D HHG+GT+ FY V+ +S H FP + D +
Sbjct: 148 ILELLKY--LQRVLCMDIDTHHGDGTEEAFYTADWVMTVSFHN------FPVTGDL--RD 197
Query: 469 VGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLG 528
+G GKG+ + +N + + D A F+ V+ + P V++ G D+ D LG
Sbjct: 198 IGAGKGKYYAINYPL-RDCIDDESCEAIFKPVMSKV---MEPSAVVLQCGSDSLSGDWLG 253
Query: 529 GCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 582
++ + + ++K+ ++L GGY I +++ T T L +P
Sbjct: 254 SFNLTIKGHK-CVGFVKSFNLPMLMLR-GGGYTIHNVARCWTYETAVTLDTEIP 305
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/92 (36%), Positives = 49/92 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA+ E GFC N++ +A L L RVL +D D HHG+GT+ FY V+ +S
Sbjct: 128 HHAKNSEASGFCYVNDIVLAILELLKY--LQRVLCMDIDTHHGDGTEEAFYTADWVMTVS 185
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVN 268
H FP + D ++G GKG+ + +N
Sbjct: 186 FHN------FPVTGDL--RDIGAGKGKYYAIN 209
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 182 (69.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 50/177 (28%), Positives = 81/177 (45%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D+ GFC + ++++A K+ + G+S+ I+D D H GNG + F ND RV +
Sbjct: 141 HHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATIIDLDAHQGNGHERDFMNDHRVYIM 200
Query: 448 SVH-RYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAY 506
+ RY +P D + K V + W G D EY+ +
Sbjct: 201 DAYNRY----IYPG--DGFAKRAIKRK-----VELEW---GTEDTEYLQKVHTHVEGALN 246
Query: 507 QFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 560
+ P++++ +AG D DPLGG +SP+ + A+ R I++ GGY
Sbjct: 247 ELKPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFKAARSRGIPILMVTSGGY 303
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/117 (32%), Positives = 59/117 (50%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P L + V V +P + +++ G+ A G AI G HH D+
Sbjct: 91 ITEIPPVLFLPNFLVQRKVLKP-LRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGG 149
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH-RY 240
GFC + ++++A K+ + G+S+ I+D D H GNG + F ND RV + + RY
Sbjct: 150 GFCAYADITLAIKFLFERVPGVSKATIIDLDAHQGNGHERDFMNDHRVYIMDAYNRY 206
>UNIPROTKB|Q47YS1 [details] [associations]
symbol:CPS_3373 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 176 (67.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/147 (31%), Positives = 69/147 (46%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA + GFC+ N++ +AA L N +S+VLI D DVH G+GT + N+ V +S
Sbjct: 120 HHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVS 179
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H + FPH K N++ A KG +D Y+ + F
Sbjct: 180 IHGEKN---FPHRKQVS------------NLDFAL-PKGTTDSLYLETVDNALNKAFSSF 223
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPE 535
P+ V+ AG D ND LG +S +
Sbjct: 224 KPDAVIYDAGVDIHCNDDLGHLDISTQ 250
Score = 142 (55.0 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA + GFC+ N++ +AA L N +S+VLI D DVH G+GT + N+ V +S
Sbjct: 120 HHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVS 179
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKG 262
+H + FPH K + KG
Sbjct: 180 IHGEKN---FPHRKQVSNLDFALPKG 202
>TIGR_CMR|CPS_3373 [details] [associations]
symbol:CPS_3373 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 176 (67.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/147 (31%), Positives = 69/147 (46%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA + GFC+ N++ +AA L N +S+VLI D DVH G+GT + N+ V +S
Sbjct: 120 HHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVS 179
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
+H + FPH K N++ A KG +D Y+ + F
Sbjct: 180 IHGEKN---FPHRKQVS------------NLDFAL-PKGTTDSLYLETVDNALNKAFSSF 223
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPE 535
P+ V+ AG D ND LG +S +
Sbjct: 224 KPDAVIYDAGVDIHCNDDLGHLDISTQ 250
Score = 142 (55.0 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA + GFC+ N++ +AA L N +S+VLI D DVH G+GT + N+ V +S
Sbjct: 120 HHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVS 179
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKG 262
+H + FPH K + KG
Sbjct: 180 IHGEKN---FPHRKQVSNLDFALPKG 202
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 159 (61.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 447 ISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAY 506
+S+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ +
Sbjct: 3 VSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVLKEVYI 58
Query: 507 QFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALE-GGYNISSI 565
FNP+ V++ G D DP+ ++P ++ +IL E GGYN+++
Sbjct: 59 AFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANT 118
Query: 566 SYAMTLCTKALLGDPL 581
+ T T +LG L
Sbjct: 119 ARCWTYLTGVILGKTL 134
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/105 (37%), Positives = 61/105 (58%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEY 281
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKY 240
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/105 (37%), Positives = 61/105 (58%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEY 493
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKY 240
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 266 NVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 325
N + W+ + +L + L R+L +D D+HHG+G + F +
Sbjct: 136 NWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSK 194
Query: 326 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
V+ +S+H++ G FFP + D +VG GKG ++VNV
Sbjct: 195 VMTVSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNV 229
>UNIPROTKB|E7ENE4 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
Length = 272
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/112 (35%), Positives = 62/112 (55%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQV 288
+H++ G FFP D +VG GKG ++VNV + G+ D +Y + V
Sbjct: 200 LHKFSPG-FFPGKSDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESV 247
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/112 (35%), Positives = 62/112 (55%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQV 500
+H++ G FFP D +VG GKG ++VNV + G+ D +Y + V
Sbjct: 200 LHKFSPG-FFPGKSDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESV 247
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 266 NVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 325
N + W+ + +L + L R+L +D D+HHG+G + F +
Sbjct: 136 NWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFERILYVDLDLHHGDGVEDAFSFTSK 194
Query: 326 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
V+ +S+H++ G FFP D +VG GKG ++VNV
Sbjct: 195 VMTVSLHKFSPG-FFPGKSDVS--DVGLGKGRYYSVNV 229
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 39/105 (37%), Positives = 61/105 (58%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEY 281
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKY 240
Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 39/105 (37%), Positives = 61/105 (58%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA++DE GFC N+ +V L R+L +D D+HHG+G + F +V+ +S
Sbjct: 142 HHAKKDEASGFCYLND-AVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEY 493
+H++ G FFP + D +VG GKG ++VNV + G+ D +Y
Sbjct: 200 LHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKY 240
Score = 124 (48.7 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 266 NVNVAWNKKGMSDPEYIAAFQQVILPMYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPR 325
N + W+ + +L + L R+L +D D+HHG+G + F +
Sbjct: 136 NWSGGWHHAKKDEASGFCYLNDAVLGILRL-RRKFDRILYVDLDLHHGDGVEDAFSFTSK 194
Query: 326 VLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNV 363
V+ +S+H++ G FFP + D +VG GKG ++VNV
Sbjct: 195 VMTVSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNV 229
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 157 (60.3 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 447 ISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAY 506
+S+H++ G FFP + D +VG GKG ++VNV + G+ D +Y + V+ +
Sbjct: 3 VSLHKFSPG-FFPGTGDVS--DVGLGKGRYYSVNVPI-QDGIQDEKYYQICESVLKEVYQ 58
Query: 507 QFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS 566
FNP+ V++ G D DP+ ++P ++ +IL GGYN+++ +
Sbjct: 59 AFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGYNLANTA 117
Query: 567 YAMTLCTKALLGDPL 581
T T +LG L
Sbjct: 118 RCWTYLTGVILGKTL 132
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 176 (67.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 54/193 (27%), Positives = 95/193 (49%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HHA + GFC N+V + + L L+++ +D+D+HHG+G + F ++ IS
Sbjct: 210 HHAFKQRASGFCYINDVVLLIQ-RLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTIS 268
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP--EYIAAFQQVILPIAY 506
VH Y+ G FFP G ++ + + + VN+ K G D E IA+ +++ P+
Sbjct: 269 VHLYEPG-FFP-----GTGSLSDSRKDKNVVNIPL-KHGCDDNYLELIAS--KIVNPLIE 319
Query: 507 QFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFT-HWLKALAQGRIILALEGGYN--IS 563
+ PE +++ G D + D +++ + + +K+ + I L GGYN +
Sbjct: 320 RHEPEALIIECGGDGLLGDRFNEWQLTIRGLSRIIINIMKSYPRAHIFLLGGGGYNDLLM 379
Query: 564 SISYA-MTLC-TK 574
S Y +T C TK
Sbjct: 380 SRFYTYLTWCVTK 392
Score = 132 (51.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 38/131 (29%), Positives = 68/131 (51%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 236
HHA + GFC N+V + + L L+++ +D+D+HHG+G + F ++ IS
Sbjct: 210 HHAFKQRASGFCYINDVVLLIQ-RLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTIS 268
Query: 237 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDP--EYIAAFQQVILPMYA 294
VH Y+ G FFP G ++ + + + VN+ K G D E IA+ +++ P+
Sbjct: 269 VHLYEPG-FFP-----GTGSLSDSRKDKNVVNIPL-KHGCDDNYLELIAS--KIVNPL-- 317
Query: 295 LDNHGLSRVLI 305
++ H ++I
Sbjct: 318 IERHEPEALII 328
>UNIPROTKB|G4N4X5 [details] [associations]
symbol:MGG_06043 "Histone deacetylase HOS3" species:242507
"Magnaporthe oryzae 70-15" [GO:0004407 "histone deacetylase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005935 "cellular bud
neck" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0005935 EMBL:CM001233 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11484 RefSeq:XP_003711894.1 EnsemblFungi:MGG_06043T0
GeneID:2683932 KEGG:mgr:MGG_06043 Uniprot:G4N4X5
Length = 1141
Score = 168 (64.2 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 42/123 (34%), Positives = 65/123 (52%)
Query: 145 GYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALD 202
G VCE VD+V E+ IRPPGHH P GFC NNV V + +
Sbjct: 313 GGVCE------AVDAVFTPENPAKRAFVAIRPPGHHCSASFPSGFCWVNNVHVGIMHGIL 366
Query: 203 NHGLSRVLILDWDVHHGNGTQAMFY-NDPRVLYISVH-----RYDHGSFFPHSKDAGPHN 256
+HGL+ I+D+D+HHG+G+QA+ + ++ R + +S + + G F H ++ P
Sbjct: 367 SHGLTHAAIIDFDLHHGDGSQAIAWQHNTRGIGLSTNAAWWKKPSIGYFSLHDINSYPCE 426
Query: 257 VGE 259
+G+
Sbjct: 427 MGD 429
Score = 167 (63.8 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 367 KVVDSVLNGESA--HGVAIIRPPGHHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLIL 424
+ VD+V E+ IRPPGHH P GFC NNV V + + +HGL+ I+
Sbjct: 317 EAVDAVFTPENPAKRAFVAIRPPGHHCSASFPSGFCWVNNVHVGIMHGILSHGLTHAAII 376
Query: 425 DWDVHHGNGTQAMFY-NDPRVLYISVH-----RYDHGSFFPHSKDAGPHNVGE 471
D+D+HHG+G+QA+ + ++ R + +S + + G F H ++ P +G+
Sbjct: 377 DFDLHHGDGSQAIAWQHNTRGIGLSTNAAWWKKPSIGYFSLHDINSYPCEMGD 429
Score = 64 (27.6 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 513 VLVSAGYDACVNDPLG----GCKVSPEAYAHFTHWLKALA-------QGRIILALEGGYN 561
+ +SAG+DA + G V E YA T + +A +GR+I LEGGY+
Sbjct: 501 IFLSAGFDASEWEGAGMQRHKVNVPTEFYARLTRDVVKIAAEEETSVEGRVISVLEGGYS 560
Query: 562 ISSISYAMTLCTKALLGD 579
++ + L GD
Sbjct: 561 DRALCSGILSHVSGLAGD 578
>UNIPROTKB|Q8EFZ9 [details] [associations]
symbol:SO_1815 "Histone deacetylase superfamily protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 170 (64.9 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 52/186 (27%), Positives = 87/186 (46%)
Query: 380 GVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 438
G+A+ G HHA + G+CIFN++ +AA+ + L ++LI D DVH G+GT +
Sbjct: 110 GIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTATLS 169
Query: 439 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQ 498
++ S+H D+ FP K H+ +++ + KG D Y+ +
Sbjct: 170 QLHQGIISCSIHCKDN---FPSRKQ---HS-------HYDIELV---KGTDDSAYLDTVE 213
Query: 499 QVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEA-YAHFTHWLKALAQGRIILA-- 555
Q + + P+L+L AG D +D LG ++S + Y L I +A
Sbjct: 214 QTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLSMARAANIPVAAV 273
Query: 556 LEGGYN 561
+ GGY+
Sbjct: 274 IGGGYS 279
Score = 134 (52.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 168 GVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 226
G+A+ G HHA + G+CIFN++ +AA+ + L ++LI D DVH G+GT +
Sbjct: 110 GIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTATLS 169
Query: 227 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKG 262
++ S+H D+ FP K +++ KG
Sbjct: 170 QLHQGIISCSIHCKDN---FPSRKQHSHYDIELVKG 202
>TIGR_CMR|SO_1815 [details] [associations]
symbol:SO_1815 "histone deacetylase/AcuC/AphA family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 170 (64.9 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 52/186 (27%), Positives = 87/186 (46%)
Query: 380 GVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 438
G+A+ G HHA + G+CIFN++ +AA+ + L ++LI D DVH G+GT +
Sbjct: 110 GIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTATLS 169
Query: 439 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQ 498
++ S+H D+ FP K H+ +++ + KG D Y+ +
Sbjct: 170 QLHQGIISCSIHCKDN---FPSRKQ---HS-------HYDIELV---KGTDDSAYLDTVE 213
Query: 499 QVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEA-YAHFTHWLKALAQGRIILA-- 555
Q + + P+L+L AG D +D LG ++S + Y L I +A
Sbjct: 214 QTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLSMARAANIPVAAV 273
Query: 556 LEGGYN 561
+ GGY+
Sbjct: 274 IGGGYS 279
Score = 134 (52.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 168 GVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMF 226
G+A+ G HHA + G+CIFN++ +AA+ + L ++LI D DVH G+GT +
Sbjct: 110 GIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTATLS 169
Query: 227 YNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKG 262
++ S+H D+ FP K +++ KG
Sbjct: 170 QLHQGIISCSIHCKDN---FPSRKQHSHYDIELVKG 202
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 48/176 (27%), Positives = 77/176 (43%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F D RV +
Sbjct: 142 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIM 201
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P G E V + W G D EY+ ++ + +
Sbjct: 202 DVYNR-H--IYP-----GDRFAKEAIRR--KVELEW---GTEDEEYLEKVERNVRRSLQE 248
Query: 508 FNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 560
P++V+ +AG D D LGG +SP + + + I++ GGY
Sbjct: 249 HLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSGGY 304
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V P + +++ G+ A G AI G HH D
Sbjct: 92 ITEIPPVIFLPNFLVQRKVLRP-LRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGG 150
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ + G+SR I+D D H GNG + F D RV + V+
Sbjct: 151 GFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVY 204
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 48/176 (27%), Positives = 77/176 (43%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F D RV +
Sbjct: 142 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIM 201
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P G E V + W G D EY+ ++ + +
Sbjct: 202 DVYNR-H--IYP-----GDRFAKEAIRR--KVELEW---GTEDEEYLEKVERNVRRSLQE 248
Query: 508 FNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 560
P++V+ +AG D D LGG +SP + + + I++ GGY
Sbjct: 249 HLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSGGY 304
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V P + +++ G+ A G AI G HH D
Sbjct: 92 ITEIPPVIFLPNFLVQRKVLRP-LRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGG 150
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ + G+SR I+D D H GNG + F D RV + V+
Sbjct: 151 GFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVY 204
>UNIPROTKB|F1SPG6 [details] [associations]
symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00390000003411 EMBL:CU928273
Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
Length = 382
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 47/176 (26%), Positives = 78/176 (44%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F D RV +
Sbjct: 141 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIM 200
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P + A + V + W D EY+ ++ + +
Sbjct: 201 DVYNR-H--IYPGDRFAK-------QAIRRKVELEW---ATEDDEYLTKVERNLEKALQE 247
Query: 508 FNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA---QGRIILALEGGY 560
P++V+ +AG D D LGG +SP+ + + Q I++ GGY
Sbjct: 248 HRPDVVVYNAGTDVLEGDRLGGLSISPQGIVKRDELVFRMVRSLQVPILMVTSGGY 303
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 177 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 235
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F D RV +
Sbjct: 141 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIM 200
Query: 236 SVH 238
V+
Sbjct: 201 DVY 203
>UNIPROTKB|I3LTU6 [details] [associations]
symbol:LOC100738481 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:FP700091
Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
Length = 275
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F D RV +
Sbjct: 141 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIM 200
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P + A + V + W D EY+ ++ + +
Sbjct: 201 DVYNR-H--IYPGDRFAK-------QAIRRKVELEW---ATEDDEYLTKVERNLEKALQE 247
Query: 508 FNPELVLVSAGYDACVNDPLGGCKVSP 534
P++V+ +AG D D LGG +SP
Sbjct: 248 HRPDVVVYNAGTDVLEGDRLGGLSISP 274
Score = 133 (51.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V +P + +++ G+ A G AI G HH D
Sbjct: 91 ITEIPPVIFLPNFLVQRKVLKP-LRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGG 149
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ + G+SR I+D D H GNG + F D RV + V+
Sbjct: 150 GFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVY 203
>UNIPROTKB|H0YHJ5 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000547259 Uniprot:H0YHJ5
Length = 110
Score = 149 (57.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 511 ELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 568
+LVLVSAG+DA P LGG VS + + + T L LA G ++LALEGG+++++I A
Sbjct: 2 DLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDA 61
Query: 569 MTLCTKALLGD 579
C ALLG+
Sbjct: 62 SEACVAALLGN 72
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 49/179 (27%), Positives = 81/179 (45%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAMFYNDPRVLYIS 448
HH + GFC F ++S+ +A +SRV+I+D D H GNG + +D RV +
Sbjct: 200 HHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILD 259
Query: 449 VHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQF 508
++ + +P D + K E + G + EY+ + + + F
Sbjct: 260 MYNPE---IYPF--DYRARRFIDQKVEVMS--------GTTTDEYLRKLDEALEVASRNF 306
Query: 509 NPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGYNISS 564
PELV+ +AG D DPLG K+SP+ + A+ + +++ GGY SS
Sbjct: 307 QPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGYMKSS 365
>ZFIN|ZDB-GENE-040704-7 [details] [associations]
symbol:hdac11 "histone deacetylase 11" species:7955
"Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
Length = 366
Score = 165 (63.1 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 52/179 (29%), Positives = 82/179 (45%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D+ GFC + ++++A K+ + G++ I+D D H GNG + F D RV +
Sbjct: 153 HHCSSDKGGGFCAYADITLAIKFLFERVEGVASATIIDLDAHQGNGHERDFLEDRRVYIM 212
Query: 448 SVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAYQ 507
V+ H +P D + K V + W G D EY+ Q+V L
Sbjct: 213 DVYNR-H--IYPG--DGYAKRAIKRK-----VELDW---GTEDSEYL---QKVDLHSEGA 256
Query: 508 FN---PELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 560
N P++++ +AG D DPLGG +SP+ + A+ R I++ GGY
Sbjct: 257 LNEARPDIIIYNAGTDILDGDPLGGLAISPQGIIKRDEIIFRAARRRGIPILMVTSGGY 315
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 35/114 (30%), Positives = 55/114 (48%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P L + V V P + +++ G+ A G AI G HH D+
Sbjct: 103 ITEIPPLLFLPNFLVQRKVLRP-LRTQTGGTIMAGKLAIDRGWAINVGGGFHHCSSDKGG 161
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ + G++ I+D D H GNG + F D RV + V+
Sbjct: 162 GFCAYADITLAIKFLFERVEGVASATIIDLDAHQGNGHERDFLEDRRVYIMDVY 215
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 58/221 (26%), Positives = 102/221 (46%)
Query: 373 LNGESAHGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHG 431
LN + A +AI G HH ++D+ GF N+V +A L + RVL ++ HG
Sbjct: 131 LNRQEAD-IAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKS--FKRVLYIEIGFPHG 187
Query: 432 NGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGP-HNVGEGKGEGFNVNVAWNKKGMSD 490
+ + F + RV+ +S H+ D G + GEGKG+ +++N K G+ D
Sbjct: 188 DEVEEAFKDTDRVMTVSFHKVG---------DTGDISDYGEGKGQYYSLNAPL-KDGLDD 237
Query: 491 PEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQG 550
F VI + PE++++ G D+ DP G +S + + ++++
Sbjct: 238 FSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVP 297
Query: 551 RIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDIN 591
+IL GGY + +++ T +G+ L ++DL N
Sbjct: 298 LMILG-GGGYTLPNVARCWCYETAIAVGEQL---DNDLPGN 334
>UNIPROTKB|F5GXM1 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
Bgee:F5GXM1 Uniprot:F5GXM1
Length = 289
Score = 147 (56.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 38/136 (27%), Positives = 67/136 (49%)
Query: 447 ISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAFQQVILPIAY 506
+S H+Y G +FP + D ++G GKG+ + VN + G+ D Y A F+ V+ +
Sbjct: 3 VSFHKY--GEYFPGTGDL--RDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVMSKVME 57
Query: 507 QFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSIS 566
F P V++ G D+ D LG ++ + +A ++K+ ++L GGY I +++
Sbjct: 58 MFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLG-GGGYTIRNVA 116
Query: 567 YAMTLCTKALLGDPLP 582
T T L +P
Sbjct: 117 RCWTYETAVALDTEIP 132
>WB|WBGene00007953 [details] [associations]
symbol:hda-11 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 45/186 (24%), Positives = 78/186 (41%)
Query: 379 HGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAM 437
HG AI G HHA GFC + ++++A D ++ +++D D H GNG
Sbjct: 132 HGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGHARD 191
Query: 438 FYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAF 497
F ++P V V + +PH ++A G + ++ +
Sbjct: 192 FADNPNVFVFDVF---NPYVYPHDREARQFINRAVHVNGHTTDTSYLSELRKQLAQCLID 248
Query: 498 QQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IIL 554
++ P + F ++ +AG D + DPLG K+SP+ + LA+ + I +
Sbjct: 249 REKTTPPGFDF----IMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNLAKSKGIPICM 304
Query: 555 ALEGGY 560
GGY
Sbjct: 305 VTSGGY 310
>UNIPROTKB|Q18477 [details] [associations]
symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 45/186 (24%), Positives = 78/186 (41%)
Query: 379 HGVAIIRPPG-HHAEQDEPCGFCIFNNVSVAAKYALDNHGLSRVLILDWDVHHGNGTQAM 437
HG AI G HHA GFC + ++++A D ++ +++D D H GNG
Sbjct: 132 HGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGHARD 191
Query: 438 FYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNKKGMSDPEYIAAF 497
F ++P V V + +PH ++A G + ++ +
Sbjct: 192 FADNPNVFVFDVF---NPYVYPHDREARQFINRAVHVNGHTTDTSYLSELRKQLAQCLID 248
Query: 498 QQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IIL 554
++ P + F ++ +AG D + DPLG K+SP+ + LA+ + I +
Sbjct: 249 REKTTPPGFDF----IMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNLAKSKGIPICM 304
Query: 555 ALEGGY 560
GGY
Sbjct: 305 VTSGGY 310
>UNIPROTKB|F8VRW0 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018475 HGNC:HGNC:20064 IPI:IPI01022557
ProteinModelPortal:F8VRW0 SMR:F8VRW0 Ensembl:ENST00000551837
ArrayExpress:F8VRW0 Bgee:F8VRW0 Uniprot:F8VRW0
Length = 164
Score = 125 (49.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H + HP+AL ++ V+CY+C+ YV N
Sbjct: 45 SHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYVLN 88
>UNIPROTKB|F8VVD6 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018475 HGNC:HGNC:20064 IPI:IPI01021117
ProteinModelPortal:F8VVD6 SMR:F8VVD6 Ensembl:ENST00000549639
ArrayExpress:F8VVD6 Bgee:F8VVD6 Uniprot:F8VVD6
Length = 111
Score = 125 (49.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H + HP+AL ++ V+CY+C+ YV N
Sbjct: 45 SHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYVLN 88
>UNIPROTKB|B5MCV5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
Bgee:B5MCV5 Uniprot:B5MCV5
Length = 204
Score = 133 (51.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V P + +++ G+ A G AI G HH D
Sbjct: 64 ITEIPPVIFLPNFLVQRKVLRP-LRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGG 122
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVH 238
GFC + ++++A K+ + G+SR I+D D H GNG + F +D RV + V+
Sbjct: 123 GFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVY 176
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMFYNDPRVLYI 447
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F +D RV +
Sbjct: 114 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIM 173
Query: 448 SVH 450
V+
Sbjct: 174 DVY 176
>UNIPROTKB|B5MCQ6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
Length = 268
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 42/147 (28%), Positives = 66/147 (44%)
Query: 417 GLSRVLILDWDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEG 476
G+SR I+D D H GNG + F +D RV + V+ H +P + A +
Sbjct: 92 GISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNR-H--IYPGDRFAK-------QAIR 141
Query: 477 FNVNVAWNKKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEA 536
V + W G D EY+ ++ I + P++V+ +AG D D LGG +SP
Sbjct: 142 RKVELEW---GTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAG 198
Query: 537 YAHFTHWLKALAQGR---IILALEGGY 560
+ + +GR I++ GGY
Sbjct: 199 IVKRDELVFRMVRGRRVPILMVTSGGY 225
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 52/199 (26%), Positives = 92/199 (46%)
Query: 371 SVLNGESA--HGVAIIRPPG-HHAEQDEPCGFCIFNNVS--VAAKYALDNHGLSRVLILD 425
S+L G+ A +G AI G HH GFC + ++S + + + + R++I+D
Sbjct: 137 SILAGKLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVD 196
Query: 426 WDVHHGNGTQAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNVGEGKGEGFNVNVAWNK 485
D H GNG + F N+ +YI +D + F + +D H E ++ A
Sbjct: 197 LDAHQGNGHERDF-NNVAAVYI----FDMYNAFVYPRD---HVAKE------SIRCAVEL 242
Query: 486 KGMS-DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 544
+ + D Y+ ++ ++ +F P++V+ +AG D DPLG +S E +
Sbjct: 243 RNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLV 302
Query: 545 KAL--AQG-RIILALEGGY 560
+ A G +++ L GGY
Sbjct: 303 FSTFRALGIPVVMLLSGGY 321
>UNIPROTKB|Q0V9G5 [details] [associations]
symbol:usp44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0051322 "anaphase" evidence=ISS] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0090231 "regulation of spindle
checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0090231
eggNOG:COG5533 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 EMBL:BC121579
RefSeq:NP_001072389.1 UniGene:Str.5094 ProteinModelPortal:Q0V9G5
GeneID:779843 KEGG:xtr:779843 Xenbase:XB-GENE-1014112
Uniprot:Q0V9G5
Length = 652
Score = 131 (51.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H ++HPLAL +L V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEEHALRHFQDSKHPLALEVNELYVFCYLCDDYVLN 85
>UNIPROTKB|Q5XGZ2 [details] [associations]
symbol:usp44-b "Ubiquitin carboxyl-terminal hydrolase 44-B"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC084285
RefSeq:NP_001088277.1 UniGene:Xl.49566 ProteinModelPortal:Q5XGZ2
GeneID:495110 KEGG:xla:495110 CTD:495110 Xenbase:XB-GENE-6254317
Uniprot:Q5XGZ2
Length = 690
Score = 131 (51.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H ++HPLAL +L V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEEHALRHFQDSKHPLALEVNELYVFCYLCDDYVLN 85
>UNIPROTKB|Q6NTR6 [details] [associations]
symbol:usp44-a "Ubiquitin carboxyl-terminal hydrolase 44-A"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC068889
RefSeq:NP_001084641.1 UniGene:Xl.6668 ProteinModelPortal:Q6NTR6
GeneID:414600 KEGG:xla:414600 CTD:414600 Xenbase:XB-GENE-1014118
Uniprot:Q6NTR6
Length = 690
Score = 131 (51.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H ++HPLAL +L V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEEHALRHFQDSKHPLALEVNELYVFCYLCDDYVLN 85
>UNIPROTKB|C9JEC8 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
Length = 166
Score = 114 (45.2 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 32/102 (31%), Positives = 49/102 (48%)
Query: 129 ITEHPLALSFADLSVWGYVCEPYVDNHVVDSVLNGESA--HGVAIIRPPG-HHAEQDEPC 185
ITE P + + V V P + +++ G+ A G AI G HH D
Sbjct: 64 ITEIPPVIFLPNFLVQRKVLRP-LRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGG 122
Query: 186 GFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMF 226
GFC + ++++A K+ + G+SR I+D D H GNG + F
Sbjct: 123 GFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDF 164
Score = 107 (42.7 bits), Expect = 0.00099, P = 0.00099
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 389 HHAEQDEPCGFCIFNNVSVAAKYALDN-HGLSRVLILDWDVHHGNGTQAMF 438
HH D GFC + ++++A K+ + G+SR I+D D H GNG + F
Sbjct: 114 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDF 164
>ZFIN|ZDB-GENE-040426-774 [details] [associations]
symbol:usp44 "ubiquitin specific peptidase 44"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0051322 "anaphase" evidence=ISS] [GO:0090231 "regulation of
spindle checkpoint" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 ZFIN:ZDB-GENE-040426-774 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0021551 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 CTD:84101 HOGENOM:HOG000015084 KO:K11834
EMBL:BC048060 IPI:IPI00512839 RefSeq:NP_956551.1 UniGene:Dr.78996
ProteinModelPortal:Q7ZUM8 MEROPS:C19.073 PRIDE:Q7ZUM8 GeneID:393227
KEGG:dre:393227 HOVERGEN:HBG018027 InParanoid:Q7ZUM8
NextBio:20814291 ArrayExpress:Q7ZUM8 Uniprot:Q7ZUM8
Length = 695
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H HPLAL +L V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEEHALQHFKEQHHPLALEVNELYVYCYLCDDYVLN 85
>UNIPROTKB|F8VRI7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AC018475 HGNC:HGNC:20064
IPI:IPI01022768 ProteinModelPortal:F8VRI7 SMR:F8VRI7
Ensembl:ENST00000552440 ArrayExpress:F8VRI7 Bgee:F8VRI7
Uniprot:F8VRI7
Length = 496
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H + HP+AL ++ V+CY+C+ YV N
Sbjct: 45 SHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYVLN 88
>UNIPROTKB|E1BGQ9 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862
OMA:VRGQKQD EMBL:DAAA02055061 IPI:IPI00716640 RefSeq:XP_002697284.1
RefSeq:XP_595518.4 ProteinModelPortal:E1BGQ9
Ensembl:ENSBTAT00000011820 GeneID:517349 KEGG:bta:517349
NextBio:20872416 Uniprot:E1BGQ9
Length = 683
Score = 133 (51.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIE+H++ H T HPLA+ DL V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEDHALKHFEETRHPLAMEVRDLYVFCYLCKDYVLN 85
Score = 39 (18.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 223 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 257
Q M Y P+VL + + R+ S H + G H V
Sbjct: 534 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 567
Score = 39 (18.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 317 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 351
Q M Y P+VL + + R+ S H + G H V
Sbjct: 534 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 567
Score = 39 (18.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 435 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
Q M Y P+VL + + R+ S H + G H V
Sbjct: 534 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 567
>UNIPROTKB|Q5T3E1 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
EMBL:AL160163 EMBL:AL365205 HOGENOM:HOG000015084 HOVERGEN:HBG018027
UniGene:Hs.665742 HGNC:HGNC:20078 IPI:IPI00639902 SMR:Q5T3E1
STRING:Q5T3E1 Ensembl:ENST00000373010 Uniprot:Q5T3E1
Length = 585
Score = 131 (51.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIE+H++ H T HPLA+ DL V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLN 85
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 223 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 257
Q M Y P+VL + + R+ S H + G H V
Sbjct: 539 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 572
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 317 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 351
Q M Y P+VL + + R+ S H + G H V
Sbjct: 539 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 572
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 435 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
Q M Y P+VL + + R+ S H + G H V
Sbjct: 539 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 572
>UNIPROTKB|E2R0W7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0090266 "regulation of
mitotic cell cycle spindle assembly checkpoint" evidence=IEA]
[GO:0060564 "negative regulation of mitotic anaphase-promoting
complex activity" evidence=IEA] [GO:0051322 "anaphase"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
OMA:AIKSQNY EMBL:AAEX03009951 RefSeq:XP_532654.1
ProteinModelPortal:E2R0W7 Ensembl:ENSCAFT00000010298 GeneID:475430
KEGG:cfa:475430 NextBio:20851273 Uniprot:E2R0W7
Length = 711
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H + HP+AL ++ V+CY+C+ YV N
Sbjct: 45 SHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYVLN 88
>UNIPROTKB|D2HBJ8 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9646 "Ailuropoda melanoleuca" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051322 "anaphase"
evidence=ISS] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=ISS] [GO:0090231
"regulation of spindle checkpoint" evidence=ISS] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
GO:GO:0051322 GO:GO:0060564 GeneTree:ENSGT00690000101718
EMBL:GL192660 RefSeq:XP_002919284.1 Ensembl:ENSAMET00000002387
GeneID:100470180 KEGG:aml:100470180 CTD:84101 HOGENOM:HOG000015084
KO:K11834 OMA:AIKSQNY Uniprot:D2HBJ8
Length = 711
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H + HP+AL ++ V+CY+C+ YV N
Sbjct: 45 SHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYVLN 88
>UNIPROTKB|Q9H0E7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IMP] [GO:0090231 "regulation of spindle
checkpoint" evidence=IMP] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0090266 "regulation of mitotic cell cycle spindle assembly
checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5077 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 OMA:AIKSQNY HOVERGEN:HBG018027
EMBL:AL136825 EMBL:AK315697 EMBL:AC018475 EMBL:BC030704
IPI:IPI00030306 RefSeq:NP_001035862.1 RefSeq:NP_115523.2
UniGene:Hs.646421 ProteinModelPortal:Q9H0E7 SMR:Q9H0E7
IntAct:Q9H0E7 STRING:Q9H0E7 MEROPS:C19.057 PhosphoSite:Q9H0E7
DMDM:300669621 PaxDb:Q9H0E7 PRIDE:Q9H0E7 DNASU:84101
Ensembl:ENST00000258499 Ensembl:ENST00000393091
Ensembl:ENST00000537435 GeneID:84101 KEGG:hsa:84101 UCSC:uc001teg.3
GeneCards:GC12M095910 H-InvDB:HIX0010895 HGNC:HGNC:20064
HPA:HPA026543 MIM:610993 neXtProt:NX_Q9H0E7 PharmGKB:PA134931457
InParanoid:Q9H0E7 OrthoDB:EOG4XGZZK PhylomeDB:Q9H0E7
GenomeRNAi:84101 NextBio:73349 ArrayExpress:Q9H0E7 Bgee:Q9H0E7
CleanEx:HS_USP44 Genevestigator:Q9H0E7 GermOnline:ENSG00000136014
Uniprot:Q9H0E7
Length = 712
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H + HP+AL ++ V+CY+C+ YV N
Sbjct: 45 SHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYVLN 88
>UNIPROTKB|I3LRM6 [details] [associations]
symbol:I3LRM6 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:VRGQKQD EMBL:CU468691
Ensembl:ENSSSCT00000023974 Uniprot:I3LRM6
Length = 628
Score = 131 (51.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIE+H++ H T HPLA+ DL V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLN 85
Score = 39 (18.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 223 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 257
Q M Y P+VL + + R+ S H + G H V
Sbjct: 508 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 541
Score = 39 (18.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 317 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 351
Q M Y P+VL + + R+ S H + G H V
Sbjct: 508 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 541
Score = 39 (18.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 435 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
Q M Y P+VL + + R+ S H + G H V
Sbjct: 508 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 541
>ZFIN|ZDB-GENE-050208-484 [details] [associations]
symbol:usp49 "ubiquitin specific peptidase 49"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
ZFIN:ZDB-GENE-050208-484 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
eggNOG:COG5077 EMBL:AL645789 GeneTree:ENSGT00690000101718
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
CTD:25862 OMA:VRGQKQD EMBL:BC171546 EMBL:BC171548 IPI:IPI00503837
RefSeq:NP_001038361.1 UniGene:Dr.13979 Ensembl:ENSDART00000037069
GeneID:559473 KEGG:dre:559473 InParanoid:Q1MTK1 NextBio:20882985
Uniprot:Q1MTK1
Length = 649
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
V CGRY+EEHS H T+HPLA+ +L V+C+ C YV N
Sbjct: 44 VACGRYMEEHSRSHYQQTQHPLAMDVRELDVFCFACGDYVLN 85
>UNIPROTKB|F1P4C5 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051322 "anaphase" evidence=IEA] [GO:0060564 "negative
regulation of mitotic anaphase-promoting complex activity"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 EMBL:AADN02005945
IPI:IPI00600923 Ensembl:ENSGALT00000018595 Uniprot:F1P4C5
Length = 717
Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H HP+AL +L V+CY+C+ YV N
Sbjct: 45 SHVACGRYIEEHALKHFQENGHPVALEVNELYVFCYLCDDYVLN 88
>UNIPROTKB|E2RP15 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 OMA:VRGQKQD
EMBL:AAEX03008323 RefSeq:XP_532134.3 Ensembl:ENSCAFT00000002525
GeneID:474899 KEGG:cfa:474899 NextBio:20850836 Uniprot:E2RP15
Length = 681
Score = 131 (51.2 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIE+H++ H T HPLA+ DL V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLN 85
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 223 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 257
Q M Y P+VL + + R+ S H + G H V
Sbjct: 532 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 565
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 317 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 351
Q M Y P+VL + + R+ S H + G H V
Sbjct: 532 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 565
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 435 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
Q M Y P+VL + + R+ S H + G H V
Sbjct: 532 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 565
>UNIPROTKB|F1RUW2 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 EMBL:CU914409
RefSeq:XP_003128438.3 Ensembl:ENSSSCT00000001812 GeneID:100520499
KEGG:ssc:100520499 OMA:INCKISE Uniprot:F1RUW2
Length = 682
Score = 131 (51.2 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIE+H++ H T HPLA+ DL V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLN 85
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 223 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 257
Q M Y P+VL + + R+ S H + G H V
Sbjct: 533 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 566
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 317 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 351
Q M Y P+VL + + R+ S H + G H V
Sbjct: 533 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 566
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 435 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
Q M Y P+VL + + R+ S H + G H V
Sbjct: 533 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 566
>RGD|1310513 [details] [associations]
symbol:Usp49 "ubiquitin specific peptidase 49" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
RGD:1310513 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834
OrthoDB:EOG4XGZZK CTD:25862 OMA:VRGQKQD EMBL:AC129162
IPI:IPI00371730 RefSeq:NP_001129942.1 UniGene:Rn.147913
Ensembl:ENSRNOT00000018550 GeneID:316211 KEGG:rno:316211
UCSC:RGD:1310513 NextBio:670532 Uniprot:D3ZJ49
Length = 685
Score = 131 (51.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIE+H++ H T HPLA+ DL V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLN 85
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 223 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 257
Q M Y P+VL + + R+ S H + G H V
Sbjct: 536 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 569
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 317 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 351
Q M Y P+VL + + R+ S H + G H V
Sbjct: 536 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 569
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 435 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
Q M Y P+VL + + R+ S H + G H V
Sbjct: 536 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 569
>DICTYBASE|DDB_G0283917 [details] [associations]
symbol:sir2A "UBP-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0070403 "NAD+
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001607
InterPro:IPR003000 Pfam:PF02146 Pfam:PF02148 PROSITE:PS50271
dictyBase:DDB_G0283917 GenomeReviews:CM000153_GR GO:GO:0070403
GO:GO:0046872 GO:GO:0008270 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AAFI02000058 eggNOG:COG0846
Gene3D:3.30.1600.10 InterPro:IPR026591 InterPro:IPR026590
PANTHER:PTHR11085 PROSITE:PS50305 RefSeq:XP_638798.1
ProteinModelPortal:Q54QE6 SMR:Q54QE6 EnsemblProtists:DDB0216430
GeneID:8624322 KEGG:ddi:DDB_G0283917 InParanoid:Q54QE6 KO:K11412
OMA:CNDESEN Uniprot:Q54QE6
Length = 512
Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 18 LVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
+V C R++ H+ H +T+HP++ SF+D S WCY C+ YV N
Sbjct: 51 VVSCSRHVNGHAGEHFENTKHPISASFSDHSFWCYTCDTYVHN 93
>UNIPROTKB|Q70CQ1 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0005737 EMBL:CH471081 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 EMBL:AL365205
HOGENOM:HOG000015084 KO:K11834 MEROPS:C19.073 HOVERGEN:HBG018027
OrthoDB:EOG4XGZZK EMBL:AJ586139 EMBL:BC014176 IPI:IPI00156871
IPI:IPI00455818 RefSeq:NP_061031.2 UniGene:Hs.665742
ProteinModelPortal:Q70CQ1 SMR:Q70CQ1 IntAct:Q70CQ1 STRING:Q70CQ1
PhosphoSite:Q70CQ1 DMDM:52000871 PaxDb:Q70CQ1 PRIDE:Q70CQ1
DNASU:25862 Ensembl:ENST00000297229 Ensembl:ENST00000373006
Ensembl:ENST00000373009 Ensembl:ENST00000394253 GeneID:25862
KEGG:hsa:25862 UCSC:uc003ori.3 CTD:25862 GeneCards:GC06M041762
H-InvDB:HIX0164985 HGNC:HGNC:20078 HPA:HPA030254 HPA:HPA030255
neXtProt:NX_Q70CQ1 PharmGKB:PA134954570 InParanoid:Q70CQ1
OMA:VRGQKQD GenomeRNAi:25862 NextBio:47231 ArrayExpress:Q70CQ1
Bgee:Q70CQ1 CleanEx:HS_USP49 Genevestigator:Q70CQ1
GermOnline:ENSG00000164663 Uniprot:Q70CQ1
Length = 688
Score = 131 (51.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIE+H++ H T HPLA+ DL V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLN 85
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 223 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 257
Q M Y P+VL + + R+ S H + G H V
Sbjct: 539 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 572
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 317 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 351
Q M Y P+VL + + R+ S H + G H V
Sbjct: 539 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 572
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 435 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPHNV 469
Q M Y P+VL + + R+ S H + G H V
Sbjct: 539 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVHVV 572
>UNIPROTKB|E1BLZ0 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0090266 "regulation of mitotic cell
cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834 OMA:AIKSQNY
EMBL:DAAA02012807 IPI:IPI00703062 RefSeq:NP_001192766.1
UniGene:Bt.36835 PRIDE:E1BLZ0 Ensembl:ENSBTAT00000026571
GeneID:517022 KEGG:bta:517022 NextBio:20872356 Uniprot:E1BLZ0
Length = 709
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIEEH++ H + HP+AL ++ V+CY+C+ YV N
Sbjct: 45 SHVACGRYIEEHALGHFQESSHPVALEVNEMYVFCYLCDDYVLN 88
>MGI|MGI:2685391 [details] [associations]
symbol:Usp49 "ubiquitin specific peptidase 49" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 MGI:MGI:2685391 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 UniGene:Mm.59393
GeneTree:ENSGT00690000101718 HOGENOM:HOG000015084 KO:K11834
MEROPS:C19.073 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK CTD:25862
OMA:VRGQKQD EMBL:BC060712 IPI:IPI00420459 RefSeq:NP_940813.1
ProteinModelPortal:Q6P9L4 SMR:Q6P9L4 STRING:Q6P9L4
PhosphoSite:Q6P9L4 PRIDE:Q6P9L4 Ensembl:ENSMUST00000024779
GeneID:224836 KEGG:mmu:224836 UCSC:uc008cvv.1 InParanoid:Q6P9L4
NextBio:377415 Bgee:Q6P9L4 CleanEx:MM_USP49 Genevestigator:Q6P9L4
GermOnline:ENSMUSG00000023984 Uniprot:Q6P9L4
Length = 685
Score = 131 (51.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 17 SLVRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
S V CGRYIE+H++ H T HPLA+ DL V+CY+C+ YV N
Sbjct: 42 SHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLN 85
Score = 38 (18.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 223 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPH 255
Q M Y P+VL + + R+ S H + G H
Sbjct: 536 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVH 567
Score = 38 (18.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 317 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPH 349
Q M Y P+VL + + R+ S H + G H
Sbjct: 536 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVH 567
Score = 38 (18.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 435 QAMFYNDPRVLYISVHRYDHGSFFPHSKDAGPH 467
Q M Y P+VL + + R+ S H + G H
Sbjct: 536 QLMIYRLPQVLRLHLKRF-RWSGRNHREKIGVH 567
>UNIPROTKB|I3LA47 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0090266 "regulation of mitotic cell
cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
GeneTree:ENSGT00690000101718 KO:K11834 OMA:AIKSQNY EMBL:FP340372
RefSeq:XP_003126758.2 Ensembl:ENSSSCT00000025589 GeneID:100516911
KEGG:ssc:100516911 Uniprot:I3LA47
Length = 709
Score = 122 (48.0 bits), Expect = 0.00066, P = 0.00066
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 19 VRCGRYIEEHSMLHGVSTEHPLALSFADLSVWCYVCEAYVDN 60
V CGRYIEEH++ H + HP+AL ++ V+CY C+ YV N
Sbjct: 47 VACGRYIEEHALKHFQESSHPVALEVNEMYVFCYFCDDYVLN 88
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.444 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 632 632 0.00092 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 240
No. of states in DFA: 618 (66 KB)
Total size of DFA: 390 KB (2182 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 47.01u 0.10s 47.11t Elapsed: 00:00:26
Total cpu time: 47.10u 0.11s 47.21t Elapsed: 00:00:27
Start: Thu Aug 15 13:49:40 2013 End: Thu Aug 15 13:50:07 2013
WARNINGS ISSUED: 1