Your job contains 1 sequence.
>psy8284
MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT
PSERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDISTEGVQSTPLHIPRAEFKYE
GNPKQEIYATRDCYPIQSQEFVRLCDERLDSLIAKASPVLVVLSPAKHVR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8284
(170 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 251 4.5e-20 1
UNIPROTKB|H9KZJ3 - symbol:HDAC10 "Uncharacterized protein... 164 3.6e-11 1
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 167 3.8e-11 1
ASPGD|ASPL0000014944 - symbol:hdaA species:162425 "Emeric... 156 3.6e-10 1
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 158 3.7e-10 1
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 151 2.2e-09 1
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 151 2.3e-09 1
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"... 150 2.6e-09 1
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"... 150 2.7e-09 1
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 148 4.3e-09 1
UNIPROTKB|Q969S8 - symbol:HDAC10 "Histone deacetylase 10"... 145 4.5e-09 1
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 142 1.9e-08 1
MGI|MGI:2158340 - symbol:Hdac10 "histone deacetylase 10" ... 137 3.2e-08 1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 137 4.3e-08 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 137 4.3e-08 1
UNIPROTKB|E2RS82 - symbol:HDAC10 "Uncharacterized protein... 132 8.4e-08 1
ZFIN|ZDB-GENE-030131-5464 - symbol:hdac10 "histone deacet... 133 9.8e-08 1
UNIPROTKB|E2RSA8 - symbol:HDAC10 "Uncharacterized protein... 132 1.1e-07 1
UNIPROTKB|F1RXT2 - symbol:LOC100518786 "Uncharacterized p... 132 1.1e-07 1
UNIPROTKB|I3LDD6 - symbol:LOC100518786 "Uncharacterized p... 132 1.1e-07 1
UNIPROTKB|G4NCI1 - symbol:MGG_01076 "Histone deacetylase ... 132 1.3e-07 1
UNIPROTKB|Q0VD49 - symbol:HDAC10 "Uncharacterized protein... 126 4.9e-07 1
SGD|S000004966 - symbol:HDA1 "Putative catalytic subunit ... 123 3.3e-06 1
WB|WBGene00001837 - symbol:hda-4 species:6239 "Caenorhabd... 122 7.3e-06 1
POMBASE|SPBC800.03 - symbol:clr3 "histone deacetylase (cl... 112 0.00029 1
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 251 (93.4 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 59/138 (42%), Positives = 76/138 (55%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNF-ETLG 59
M++TPACY HLLN L A +VAV+LEGGYCL SLAEGAALTLR+LL DPCP ET+
Sbjct: 387 MEVTPACYPHLLNPLLRLADARVAVVLEGGYCLDSLAEGAALTLRSLLGDPCPPLVETVP 446
Query: 60 TPSERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDIST-----EGVQSTPLHIPR 114
P + + + +L+CI HRP+W C + Q + + LH
Sbjct: 447 LPR------------AELAQALLSCIAVHRPHWRCLQLQQTYDCVELQDRDKEEDLHTVL 494
Query: 115 AEFKYEGNPKQEIYATRD 132
+ G P + Y TRD
Sbjct: 495 RHW-IGGPPPMDRYPTRD 511
Score = 114 (45.2 bits), Expect = 0.00027, P = 0.00027
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
+T Y L + L+ A G++ V LEGGY + S++ + + LL DP P + T
Sbjct: 816 VTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATAL 875
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYWNCYKF 97
++ ++F S E++ C+ R +W +F
Sbjct: 876 QKP----PTVAFQSCVESLQQCLQVQRNHWRSLEF 906
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 164 (62.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 45/127 (35%), Positives = 62/127 (48%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M+ TP +AHL + L A GK+ VILEGGY LKSL+E +T++ LL DP P
Sbjct: 277 MNATPEVFAHLTHFLMQLAHGKLCVILEGGYHLKSLSESVCMTVKTLLRDPLPQVTGEMA 336
Query: 61 PSERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDISTEGVQSTPLHIPRAEFKYE 120
P S+I E+I N H+PYW ++D S ST +P+ +
Sbjct: 337 PC-----------LSAI-ESIQNVRAAHKPYWKWLTYEDTSFLHNLSTRSDLPKTADITD 384
Query: 121 GNPKQEI 127
N +I
Sbjct: 385 SNETDKI 391
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 167 (63.8 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 37/92 (40%), Positives = 56/92 (60%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M ++P C++ L + L G AQG++ + LEGGY L+S AEG ++R+LL DPCP+ + G
Sbjct: 333 MQVSPECFSILTHMLKGVAQGRLVLALEGGYNLQSTAEGVCASMRSLLGDPCPHLPSSGA 392
Query: 61 PSERILFIYALLSFSSITETILNCIYEHRPYW 92
P E L SI++TI + +Y P+W
Sbjct: 393 PCESAL--------KSISKTISD-LY---PFW 412
Score = 134 (52.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/136 (31%), Positives = 65/136 (47%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
+TP YAHL + L A G+V +ILEGGY L S++E ++ LL D P+ + L TP
Sbjct: 717 VTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLDHL-TPL 775
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDISTEGVQSTPLHIPRAEFKYEGN 122
+ +S T +I N + H P+W+ + +I S P P+ + G
Sbjct: 776 K-----------TSATVSINNVLRAHAPFWSSLRV-NIPESLRLSLPSPKPKGKCTPGGK 823
Query: 123 PKQEIYATRDCYPIQS 138
K+ + R P QS
Sbjct: 824 GKK---SPRQSTPSQS 836
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 156 (60.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 47/133 (35%), Positives = 64/133 (48%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
+TPACYAH+ + L AQGKVAV LEGGY +S+++ A + L+ +P P+ + PS
Sbjct: 412 VTPACYAHMTHMLMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNP-PDRLSFTCPS 470
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDISTEGVQSTPLH-IPRAEFKYEG 121
E I + SSI YW C + I EGV + LH I RA Y+
Sbjct: 471 EAA--ISTIRRVSSIQSD----------YWKCMYPKAIKNEGVWTDRLHDIIRA---YQA 515
Query: 122 NPKQEIYATRDCY 134
+ Y Y
Sbjct: 516 KQLYDNYKLTSLY 528
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 158 (60.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 33/61 (54%), Positives = 40/61 (65%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M TPA +A L + L G A+GK+ + LEGGY L SLAEG + TL LL DPCP E+ G
Sbjct: 356 MAATPAGFAQLTHLLMGLAEGKLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLESPGA 415
Query: 61 P 61
P
Sbjct: 416 P 416
Score = 136 (52.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
++P YAHL + L G A G + +ILEGGY L S++E A R+LL DP P L P
Sbjct: 754 VSPEGYAHLTHQLMGLANGHIILILEGGYNLTSISESMAACTRSLLGDPLPLLTRLRPPL 813
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYW 92
+ +SIT+TI HR YW
Sbjct: 814 SG--------AQASITKTI----QVHRRYW 831
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 151 (58.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M TPA +A L + L G A GK+ + LEGGY L++LAEG + +L LL DPCP E+ G
Sbjct: 356 MAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGA 415
Query: 61 P 61
P
Sbjct: 416 P 416
Score = 150 (57.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 44/114 (38%), Positives = 59/114 (51%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
++P YAHL + L G A G++ +ILEGGY L S++E A R+LL DP P TL P
Sbjct: 754 VSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDP-PPLLTLPRPP 812
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDIST-EGVQSTPLHIPRA 115
+ L+ SITETI HR YW + + EG S+ L +A
Sbjct: 813 -----LSGALA--SITETI----QVHRRYWRSLRVMKVEDREGPSSSKLVTKKA 855
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 151 (58.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M TPA +A L + L G A GK+ + LEGGY L++LAEG + +L LL DPCP E+ G
Sbjct: 370 MAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGA 429
Query: 61 P 61
P
Sbjct: 430 P 430
Score = 150 (57.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 44/114 (38%), Positives = 59/114 (51%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
++P YAHL + L G A G++ +ILEGGY L S++E A R+LL DP P TL P
Sbjct: 768 VSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDP-PPLLTLPRPP 826
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDIST-EGVQSTPLHIPRA 115
+ L+ SITETI HR YW + + EG S+ L +A
Sbjct: 827 -----LSGALA--SITETI----QVHRRYWRSLRVMKVEDREGPSSSKLVTKKA 869
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 150 (57.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 32/61 (52%), Positives = 39/61 (63%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M TPA +A L + L G A GK+ + LEGGY L+SLAEG + +L LL DPCP E G
Sbjct: 366 MAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPLLEFPGA 425
Query: 61 P 61
P
Sbjct: 426 P 426
Score = 142 (55.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 37/90 (41%), Positives = 47/90 (52%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
++P CYAHL + L G A G++ +ILEGGY L S++E A R+LL D P L P
Sbjct: 763 VSPECYAHLTHLLMGLANGRIILILEGGYNLISISESMAACTRSLLGDSPPLLTLLRPPL 822
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYW 92
R L +SI ET HR YW
Sbjct: 823 SRAL--------ASIAETT----QIHRRYW 840
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 150 (57.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 43/109 (39%), Positives = 57/109 (52%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
++P YAHL + L G A G+V +ILEGGY L S++E A R+LL DP P TL P
Sbjct: 767 VSPEGYAHLTHLLMGLANGRVVLILEGGYNLTSISESMAACTRSLLGDP-PPLLTLSRPP 825
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDIST-EGVQSTPL 110
+ L+ SITETI HR YW + + EG ++ L
Sbjct: 826 -----LSGALA--SITETI----QVHRRYWRSLRVMKVEDKEGPSTSEL 863
Score = 144 (55.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M TPA +A L + L G A GK+ + LEGGY L++LAEG + +L LL DPCP E+
Sbjct: 370 MATTPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPILESPSA 429
Query: 61 P 61
P
Sbjct: 430 P 430
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 148 (57.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M TPA +AHL + L G A GK+ + LEGGY L++LA+G + +L LL DPCP E+
Sbjct: 355 MAATPAGFAHLTHLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCVV 414
Query: 61 P 61
P
Sbjct: 415 P 415
Score = 141 (54.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 39/113 (34%), Positives = 54/113 (47%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
+TP YAHL + L G A G++ +ILEGGY L S++E A +LL DP P L P
Sbjct: 753 VTPEGYAHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQ 812
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDIST-EGVQSTPLHIPR 114
AL+S S + + HR YW + + E S+ L I +
Sbjct: 813 SG-----ALVSISEVIQV-------HRKYWRSLRLMKMEDKEECSSSRLVIKK 853
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 145 (56.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 40/113 (35%), Positives = 53/113 (46%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M TP C+AHL L A G+V +LEGGY L+SLAE +T++ LL DP P L
Sbjct: 275 MQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPAP---PLSG 331
Query: 61 PSERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDISTEGVQSTPLHIP 113
P + S E+I + P+W + QD+ T S H P
Sbjct: 332 P---------MAPCQSALESIQSARAAQAPHWKSLQQQDV-TAVPMSPSSHSP 374
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 142 (55.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M TPA +AHL + L G A GK+ + LEGGY L +LA+G + +L LL DPCP E+
Sbjct: 358 MSATPAGFAHLTHFLMGLAGGKLILSLEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVA 417
Query: 61 P 61
P
Sbjct: 418 P 418
Score = 142 (55.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 37/106 (34%), Positives = 53/106 (50%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
+TP YAHL + L G A G++ +ILEGGY L S++E A +LL DP P +L P
Sbjct: 756 VTPEGYAHLTHLLMGLAGGRIILILEGGYNLTSISESMAACTHSLLGDPPPQLTSLRPPQ 815
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDISTEGVQST 108
L +SI+E I HR YW + + + +S+
Sbjct: 816 SGAL--------ASISEVI----QVHRKYWRSLRLMKMEDKEERSS 849
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 137 (53.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 39/113 (34%), Positives = 56/113 (49%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 60
M TP C+AHL L A G++ +LEGGY L+SLA+ + ++ LL DP P L
Sbjct: 275 MQATPECFAHLTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMV 334
Query: 61 PSERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDISTEGVQSTPLHIP 113
P + AL S S+ +T PYW + Q+++ V S+ H P
Sbjct: 335 PCQS-----ALESIQSV-QTA------QTPYWTSLQ-QNVAP--VLSSSTHSP 372
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 137 (53.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 48/165 (29%), Positives = 78/165 (47%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
+TPA Y ++ ++L G A+GK+AVILEGGY L S+++ A + L+ +P N TL +
Sbjct: 411 VTPAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPPENTITLRPQA 470
Query: 63 ERILFIYALLS-----FSSITETILNCIYEHRPYWNCYKFQDISTEGVQSTPLHIPRAEF 117
E I + ++ F S+ I N I+E + Y D+ + + P
Sbjct: 471 EAIEVVDEVIKIQSKYFKSLRNGIPNGIFE-----DVYDLADVEKSNYKLVNIADPIRSH 525
Query: 118 KYEG--NPKQEIYATRDCYPIQSQE--FVRLCDERLDSLIAKASP 158
+ E N K+ I P ++ F ++L+ LI ASP
Sbjct: 526 QVEKLFNEKEFINIPIISSPSNGEKPPFTTDLPDQLEDLIV-ASP 569
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 137 (53.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 48/165 (29%), Positives = 78/165 (47%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
+TPA Y ++ ++L G A+GK+AVILEGGY L S+++ A + L+ +P N TL +
Sbjct: 411 VTPAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPPENTITLRPQA 470
Query: 63 ERILFIYALLS-----FSSITETILNCIYEHRPYWNCYKFQDISTEGVQSTPLHIPRAEF 117
E I + ++ F S+ I N I+E + Y D+ + + P
Sbjct: 471 EAIEVVDEVIKIQSKYFKSLRNGIPNGIFE-----DVYDLADVEKSNYKLVNIADPIRSH 525
Query: 118 KYEG--NPKQEIYATRDCYPIQSQE--FVRLCDERLDSLIAKASP 158
+ E N K+ I P ++ F ++L+ LI ASP
Sbjct: 526 QVEKLFNEKEFINIPIISSPSNGEKPPFTTDLPDQLEDLIV-ASP 569
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 132 (51.5 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCP 53
M TP C+ HL L A G+V +LEGGY L+SL++ + +RALL DP P
Sbjct: 157 MQATPECFGHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDPVP 209
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 133 (51.9 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 46/157 (29%), Positives = 69/157 (43%)
Query: 5 PACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSER 64
P +AHL + L A GK+ V+LEGGY L SL + T+ +LL DP P LGT +
Sbjct: 334 PEIFAHLTHLLMPLAAGKMCVVLEGGYNLTSLGQSVCQTVHSLLGDPTPRISGLGTACDS 393
Query: 65 ILFIYALLSFSSITETILNCIYEHRPYWNCYKFQDISTEGVQSTPLHIPRAEFKYEGNPK 124
L E+I N YW+ +K S ++ P PR + G PK
Sbjct: 394 AL------------ESIQNVRNVQSSYWSSFKHLAQS----ETNPKR-PRLDAT-NGGPK 435
Query: 125 QEIYATRDCYPIQSQEFVRLCDERLDSLIAKASPVLV 161
+ + P ++ + + + E L + A V+V
Sbjct: 436 ESSEPASESNPKKTAQDI-VWPEPLKRMPASVRTVVV 471
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCP 53
M TP C+ HL L A G+V +LEGGY L+SL++ + +RALL DP P
Sbjct: 275 MQATPECFGHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDPVP 327
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCP 53
M TP C+AHL L A G+V +LEGGY L+SL++ + ++ALL DP P
Sbjct: 275 MQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAP 327
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 1 MDITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCP 53
M TP C+AHL L A G+V +LEGGY L+SL++ + ++ALL DP P
Sbjct: 277 MQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAP 329
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 132 (51.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 33/94 (35%), Positives = 49/94 (52%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 62
+TP CYAH+ + L A G+VAV LEGGY L ++++ A R L+ +P P +G S
Sbjct: 385 VTPPCYAHMTHMLMSLAHGRVAVCLEGGYNLSAISKSALAVARTLMGEPPPK---MGMAS 441
Query: 63 ERILFIYALLSFSSITETILNCIYEHRPYWNCYK 96
+I A L + + Y+ PYW C +
Sbjct: 442 PKINREAARL-LAQVQA------YQ-APYWECMR 467
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 126 (49.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 4 TPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDP 51
TP C+AHL + L A G+V +LEGGY L+SL++ + +RALL DP
Sbjct: 278 TPECFAHLTHLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVRALLGDP 325
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 123 (48.4 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNF-ETLGTP 61
+TP+CY H+ + L A+G + V+LEGGY L ++A A + L+ +P + L P
Sbjct: 350 VTPSCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLSDP 409
Query: 62 SERILFIYALLSFSSITETILNCIYEHRPYWNCYK 96
++ E I I YWNC++
Sbjct: 410 KPEVI------------EMIDKVIRLQSKYWNCFR 432
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 122 (48.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 2 DITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 61
++TP + ++ SL +A GKV + LEGGY LKS++E A ++AL+ + + G
Sbjct: 751 EVTPEMFGYMTKSLLNYASGKVVLALEGGYDLKSISEAAQQCVQALIGES----DDAGRL 806
Query: 62 SERILFIYALLSFSSITETILNCIYEHRPYWNCYKFQD--ISTEGVQ 106
S L L S ET+ I H+ YW Q+ I+T +Q
Sbjct: 807 SSVAL---ESLPNPSAVETLQKVIAIHKSYWPALHGQEAAINTTEMQ 850
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 112 (44.5 bits), Expect = 0.00029, P = 0.00029
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 3 ITPACYAHLLNSLTGFAQGKVAVILEGGYCLKSLAEGAALTLRALLDDP 51
+TPA YAH+ L G A GKV + LEGGY L S++ A ++LL P
Sbjct: 339 LTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIP 387
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 170 170 0.00086 108 3 11 22 0.37 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 590 (63 KB)
Total size of DFA: 157 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.73u 0.11s 14.84t Elapsed: 00:00:01
Total cpu time: 14.73u 0.11s 14.84t Elapsed: 00:00:01
Start: Thu Aug 15 13:53:45 2013 End: Thu Aug 15 13:53:46 2013